Query         021891
Match_columns 306
No_of_seqs    268 out of 1837
Neff          10.1
Searched_HMMs 46136
Date          Fri Mar 29 06:26:54 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021891.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021891hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0581 Mitogen-activated prot 100.0 1.5E-50 3.2E-55  336.6  12.2  211    1-232   123-337 (364)
  2 KOG0575 Polo-like serine/threo 100.0 1.3E-49 2.9E-54  349.0  14.6  206    2-231    65-270 (592)
  3 KOG0615 Serine/threonine prote 100.0 2.7E-50 5.9E-55  338.0   9.5  209    3-232   224-439 (475)
  4 KOG1187 Serine/threonine prote 100.0 1.2E-47 2.6E-52  335.1  21.5  233    1-235   117-353 (361)
  5 KOG0192 Tyrosine kinase specif 100.0   6E-48 1.3E-52  334.9  17.2  215    1-235    85-304 (362)
  6 KOG0595 Serine/threonine-prote 100.0   4E-47 8.7E-52  319.0  19.2  207    2-230    56-268 (429)
  7 KOG0593 Predicted protein kina 100.0 3.9E-48 8.4E-53  313.5   9.7  222    3-230    49-284 (396)
  8 KOG0591 NIMA (never in mitosis 100.0 6.8E-48 1.5E-52  309.2  10.2  212    2-231    65-282 (375)
  9 KOG0198 MEKK and related serin 100.0 1.3E-46 2.9E-51  317.3  12.8  216    2-235    61-281 (313)
 10 KOG0197 Tyrosine kinases [Sign 100.0 2.3E-46 5.1E-51  324.9  13.9  214    1-235   247-462 (468)
 11 KOG0661 MAPK related serine/th 100.0 1.5E-46 3.3E-51  320.6  11.9  221    3-231    56-292 (538)
 12 KOG0578 p21-activated serine/t 100.0 1.9E-46 4.2E-51  326.6  12.7  208    2-231   317-524 (550)
 13 KOG0598 Ribosomal protein S6 k 100.0   4E-46 8.8E-51  310.0  13.6  199    2-223    72-270 (357)
 14 KOG0659 Cdk activating kinase  100.0   4E-45 8.7E-50  291.0  13.3  221    3-230    49-281 (318)
 15 KOG0600 Cdc2-related protein k 100.0 2.2E-45 4.8E-50  315.6  12.5  222    3-230   164-400 (560)
 16 KOG0592 3-phosphoinositide-dep 100.0 9.7E-45 2.1E-49  314.1  15.4  207    3-231   121-339 (604)
 17 KOG0582 Ste20-like serine/thre 100.0   2E-44 4.3E-49  305.5  16.5  218    2-230    71-293 (516)
 18 KOG0583 Serine/threonine prote 100.0 3.3E-44 7.1E-49  314.1  16.9  209    2-234    66-279 (370)
 19 KOG0588 Serine/threonine prote 100.0 7.9E-45 1.7E-49  321.0  12.0  206    2-232    59-265 (786)
 20 KOG0597 Serine-threonine prote 100.0 1.3E-43 2.8E-48  308.2  15.1  205    2-231    48-252 (808)
 21 KOG0616 cAMP-dependent protein 100.0 5.2E-44 1.1E-48  288.7  11.6  212    3-241    92-304 (355)
 22 KOG0589 Serine/threonine prote 100.0 9.7E-44 2.1E-48  307.5  13.4  207    3-231    51-259 (426)
 23 KOG0663 Protein kinase PITSLRE 100.0 2.3E-43 4.9E-48  289.3  13.5  222    3-230   123-361 (419)
 24 KOG0201 Serine/threonine prote 100.0 2.6E-44 5.7E-49  304.4   7.5  206    2-230    58-263 (467)
 25 KOG0660 Mitogen-activated prot 100.0   1E-43 2.3E-48  294.7  10.6  223    3-231    69-311 (359)
 26 KOG1989 ARK protein kinase fam 100.0 3.6E-42 7.8E-47  314.0  20.5  215    2-237    81-314 (738)
 27 KOG4721 Serine/threonine prote 100.0 2.6E-43 5.6E-48  306.5  12.3  207    4-233   161-367 (904)
 28 KOG0599 Phosphorylase kinase g 100.0 1.2E-43 2.5E-48  284.0   7.6  209    3-232    70-285 (411)
 29 cd05102 PTKc_VEGFR3 Catalytic  100.0 4.4E-42 9.6E-47  301.5  17.6  214    2-234    57-334 (338)
 30 PHA02988 hypothetical protein; 100.0 2.7E-42 5.9E-47  295.4  15.7  209    2-235    65-280 (283)
 31 KOG1026 Nerve growth factor re 100.0 8.8E-43 1.9E-47  316.9  11.9  216    1-236   535-764 (774)
 32 KOG0611 Predicted serine/threo 100.0 1.6E-42 3.5E-47  291.1  12.2  205    2-232   100-305 (668)
 33 PTZ00267 NIMA-related protein  100.0 9.1E-42   2E-46  311.9  17.9  209    2-230   112-323 (478)
 34 KOG0193 Serine/threonine prote 100.0 1.5E-42 3.3E-47  303.9  10.9  219    1-236   434-655 (678)
 35 cd05048 PTKc_Ror Catalytic Dom 100.0 2.3E-41   5E-46  289.7  17.7  212    2-233    55-282 (283)
 36 KOG0580 Serine/threonine prote 100.0 1.2E-42 2.6E-47  273.0   8.7  207    1-232    68-275 (281)
 37 KOG0585 Ca2+/calmodulin-depend 100.0   1E-41 2.3E-46  290.9  15.2  214    2-236   155-378 (576)
 38 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-41 3.5E-46  296.0  16.8  206    2-231    42-252 (323)
 39 KOG0610 Putative serine/threon 100.0 3.1E-41 6.7E-46  283.9  17.6  221    3-242   125-400 (459)
 40 cd05096 PTKc_DDR1 Catalytic do 100.0   1E-40 2.2E-45  288.6  20.1  218    2-232    66-303 (304)
 41 KOG0605 NDR and related serine 100.0 1.3E-41 2.9E-46  294.5  14.1  209    3-230   189-445 (550)
 42 cd06649 PKc_MEK2 Catalytic dom 100.0 4.6E-41   1E-45  294.1  17.8  221    2-232    50-303 (331)
 43 cd05612 STKc_PRKX_like Catalyt 100.0 1.4E-41 3.1E-46  292.2  13.8  203    2-231    48-255 (291)
 44 KOG0033 Ca2+/calmodulin-depend 100.0 5.3E-42 1.1E-46  270.5  10.0  211    1-232    56-269 (355)
 45 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.8E-41 1.5E-45  287.6  17.7  224    2-231    50-286 (288)
 46 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-41 7.3E-46  289.1  15.3  210    2-231    47-262 (285)
 47 cd07848 STKc_CDKL5 Catalytic d 100.0 3.6E-41 7.9E-46  289.0  15.4  225    2-231    47-285 (287)
 48 PTZ00263 protein kinase A cata 100.0 2.3E-41   5E-46  295.7  13.8  203    2-231    65-272 (329)
 49 cd05106 PTKc_CSF-1R Catalytic  100.0 3.2E-41 6.9E-46  299.5  14.5  214    2-234    88-372 (374)
 50 cd05585 STKc_YPK1_like Catalyt 100.0   3E-41 6.4E-46  293.0  14.0  206    2-231    40-248 (312)
 51 cd05084 PTKc_Fes Catalytic dom 100.0 1.6E-40 3.5E-45  279.7  17.8  211    2-232    40-251 (252)
 52 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.5E-40 3.2E-45  282.3  17.6  211    2-233    53-264 (266)
 53 KOG0594 Protein kinase PCTAIRE 100.0 5.2E-41 1.1E-45  279.1  14.4  222    3-230    58-302 (323)
 54 PTZ00426 cAMP-dependent protei 100.0 3.7E-41 7.9E-46  295.4  14.2  203    2-231    78-285 (340)
 55 PHA03212 serine/threonine kina 100.0 3.1E-40 6.8E-45  294.3  20.3  224    2-231   130-377 (391)
 56 cd05595 STKc_PKB_beta Catalyti 100.0 2.1E-40 4.6E-45  288.9  18.8  206    2-231    42-252 (323)
 57 cd05104 PTKc_Kit Catalytic dom 100.0 6.5E-41 1.4E-45  297.7  15.7  213    2-233    85-373 (375)
 58 cd05600 STKc_Sid2p_Dbf2p Catal 100.0   5E-41 1.1E-45  294.2  14.7  211    2-231    48-258 (333)
 59 cd05593 STKc_PKB_gamma Catalyt 100.0 6.5E-41 1.4E-45  292.8  14.7  206    2-231    42-252 (328)
 60 cd05094 PTKc_TrkC Catalytic do 100.0   2E-40 4.3E-45  285.1  17.4  215    2-236    54-284 (291)
 61 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.1E-40 4.5E-45  286.6  17.4  222    2-231    50-289 (303)
 62 KOG0658 Glycogen synthase kina 100.0 5.7E-42 1.2E-46  284.8   7.1  220    4-230    66-306 (364)
 63 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-40 4.6E-45  290.1  17.3  222    2-231    50-300 (333)
 64 KOG0579 Ste20-like serine/thre 100.0 1.1E-40 2.4E-45  293.4  15.3  212    1-232    75-291 (1187)
 65 cd05584 STKc_p70S6K Catalytic  100.0 9.2E-41   2E-45  291.3  14.8  206    2-231    47-257 (323)
 66 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-40 5.3E-45  289.7  17.2  209    2-232    82-295 (382)
 67 KOG0194 Protein tyrosine kinas 100.0 2.9E-41 6.2E-46  297.4  11.3  215    1-237   207-423 (474)
 68 KOG0584 Serine/threonine prote 100.0 3.7E-41 7.9E-46  296.7  11.9  207    2-231    88-297 (632)
 69 KOG4279 Serine/threonine prote 100.0 1.5E-40 3.3E-45  295.1  15.8  210    2-231   619-833 (1226)
 70 PF07714 Pkinase_Tyr:  Protein  100.0 4.3E-41 9.2E-46  284.5  11.8  211    1-231    47-259 (259)
 71 cd05049 PTKc_Trk Catalytic dom 100.0 4.5E-40 9.9E-45  281.1  18.2  211    2-232    55-279 (280)
 72 cd05614 STKc_MSK2_N N-terminal 100.0 7.2E-40 1.6E-44  286.8  19.5  211    2-231    51-268 (332)
 73 PHA03211 serine/threonine kina 100.0 1.1E-39 2.3E-44  294.7  21.1  226    2-231   207-456 (461)
 74 KOG4717 Serine/threonine prote 100.0 1.8E-40   4E-45  286.0  15.0  207    2-232    64-272 (864)
 75 cd05093 PTKc_TrkB Catalytic do 100.0 3.4E-40 7.4E-45  283.2  16.7  214    2-235    54-280 (288)
 76 cd05033 PTKc_EphR Catalytic do 100.0 4.7E-40   1E-44  279.1  17.2  213    2-234    52-265 (266)
 77 cd05582 STKc_RSK_N N-terminal  100.0 4.4E-41 9.6E-46  292.7  10.8  201    2-226    45-245 (318)
 78 cd05114 PTKc_Tec_Rlk Catalytic 100.0   9E-40   2E-44  275.8  18.4  209    2-231    46-255 (256)
 79 cd05062 PTKc_IGF-1R Catalytic  100.0 4.9E-40 1.1E-44  280.7  16.8  211    2-232    56-276 (277)
 80 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.2E-40 1.6E-44  276.5  17.5  210    2-232    46-256 (256)
 81 cd05608 STKc_GRK1 Catalytic do 100.0   5E-40 1.1E-44  281.1  16.6  210    2-230    40-257 (280)
 82 cd05052 PTKc_Abl Catalytic dom 100.0   7E-40 1.5E-44  277.6  17.4  212    2-234    49-262 (263)
 83 cd05108 PTKc_EGFR Catalytic do 100.0 5.1E-40 1.1E-44  285.8  16.8  213    2-235    56-269 (316)
 84 PHA03207 serine/threonine kina 100.0 8.8E-40 1.9E-44  292.2  18.7  225    2-231   133-376 (392)
 85 KOG0596 Dual specificity; seri 100.0 1.3E-40 2.7E-45  288.9  12.7  211    2-232   406-629 (677)
 86 cd05115 PTKc_Zap-70 Catalytic  100.0 8.3E-40 1.8E-44  276.3  17.4  212    2-234    42-255 (257)
 87 cd05090 PTKc_Ror1 Catalytic do 100.0 7.1E-40 1.5E-44  280.5  17.2  212    2-233    54-282 (283)
 88 KOG0574 STE20-like serine/thre 100.0 2.4E-41 5.2E-46  274.3   7.6  210    2-231    75-284 (502)
 89 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.7E-40   8E-45  289.3  15.8  224    2-230    46-290 (338)
 90 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-40 2.4E-45  291.1  12.2  206    2-231    42-253 (325)
 91 cd05607 STKc_GRK7 Catalytic do 100.0   8E-40 1.7E-44  279.4  16.9  217    3-238    41-258 (277)
 92 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-39 2.7E-44  278.7  17.8  211    2-232    54-279 (280)
 93 PLN00034 mitogen-activated pro 100.0 5.3E-40 1.1E-44  290.0  15.9  206    2-231   119-329 (353)
 94 cd05575 STKc_SGK Catalytic dom 100.0 5.4E-40 1.2E-44  286.5  15.5  196    8-227    49-244 (323)
 95 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.4E-39 3.1E-44  277.8  17.7  211    2-232    56-276 (277)
 96 KOG1095 Protein tyrosine kinas 100.0   3E-40 6.4E-45  310.4  14.6  216    1-236   741-963 (1025)
 97 cd05091 PTKc_Ror2 Catalytic do 100.0 1.3E-39 2.7E-44  279.0  17.3  212    2-233    55-282 (283)
 98 cd05111 PTK_HER3 Pseudokinase  100.0 1.5E-39 3.2E-44  278.0  17.7  213    2-235    56-269 (279)
 99 cd00192 PTKc Catalytic domain  100.0 1.8E-39 3.8E-44  274.3  17.9  211    2-232    43-262 (262)
100 cd05053 PTKc_FGFR Catalytic do 100.0 5.6E-40 1.2E-44  282.5  15.1  213    2-234    62-291 (293)
101 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-39 4.2E-44  280.4  18.2  213    2-233    85-300 (302)
102 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-39 2.9E-44  274.8  16.9  209    2-231    46-255 (256)
103 cd05588 STKc_aPKC Catalytic do 100.0 9.2E-40   2E-44  285.7  16.4  212    2-230    42-262 (329)
104 cd05589 STKc_PKN Catalytic dom 100.0 8.3E-40 1.8E-44  285.4  15.9  203    3-230    47-257 (324)
105 cd05045 PTKc_RET Catalytic dom 100.0   1E-39 2.2E-44  280.5  16.3  213    2-234    50-286 (290)
106 cd05603 STKc_SGK2 Catalytic do 100.0   9E-40 1.9E-44  284.9  16.0  195    7-225    48-242 (321)
107 PHA03209 serine/threonine kina 100.0 2.7E-39 5.9E-44  285.6  19.2  222    3-231   105-352 (357)
108 cd05590 STKc_nPKC_eta Catalyti 100.0 5.3E-40 1.2E-44  286.1  14.4  205    2-230    42-253 (320)
109 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.7E-40 2.1E-44  291.5  16.3  214    2-234    87-397 (400)
110 cd05626 STKc_LATS2 Catalytic d 100.0 6.8E-40 1.5E-44  292.0  15.3  212    2-231    48-306 (381)
111 cd05068 PTKc_Frk_like Catalyti 100.0 2.7E-39 5.8E-44  273.7  18.0  211    2-233    48-260 (261)
112 cd05602 STKc_SGK1 Catalytic do 100.0 6.4E-40 1.4E-44  286.3  14.6  207    7-237    48-254 (325)
113 cd05628 STKc_NDR1 Catalytic do 100.0 9.4E-40   2E-44  289.4  15.7  211    2-230    48-293 (363)
114 cd05592 STKc_nPKC_theta_delta  100.0 7.3E-40 1.6E-44  284.7  14.7  204    3-230    43-248 (316)
115 cd05601 STKc_CRIK Catalytic do 100.0 8.9E-40 1.9E-44  286.0  15.2  211    2-231    48-264 (330)
116 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-39 5.5E-44  274.0  17.5  210    2-231    51-261 (263)
117 cd05032 PTKc_InsR_like Catalyt 100.0 1.6E-39 3.4E-44  277.4  16.1  211    2-232    56-276 (277)
118 cd07862 STKc_CDK6 Catalytic do 100.0 8.1E-40 1.7E-44  281.1  14.4  222    2-230    48-287 (290)
119 cd05116 PTKc_Syk Catalytic dom 100.0 3.2E-39 6.9E-44  272.7  17.7  210    2-233    43-254 (257)
120 cd05598 STKc_LATS Catalytic do 100.0 8.9E-40 1.9E-44  290.9  15.0  211    2-231    48-302 (376)
121 cd05629 STKc_NDR_like_fungal C 100.0 4.5E-40 9.7E-45  292.9  13.0  212    2-232    48-307 (377)
122 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-39 2.8E-44  283.2  15.6  205    2-230    42-248 (316)
123 cd05051 PTKc_DDR Catalytic dom 100.0 3.5E-39 7.6E-44  277.9  18.1  218    2-232    66-295 (296)
124 cd05625 STKc_LATS1 Catalytic d 100.0 5.6E-40 1.2E-44  292.8  13.4  211    2-231    48-306 (382)
125 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.7E-39 5.8E-44  273.6  16.9  210    2-233    49-260 (261)
126 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-40   1E-44  291.6  12.7  211    2-231    48-297 (364)
127 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-39 2.7E-44  283.6  15.0  206    2-231    42-253 (318)
128 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-39 4.6E-44  283.1  16.4  212    2-230    42-260 (327)
129 cd05605 STKc_GRK4_like Catalyt 100.0 2.1E-39 4.5E-44  277.9  16.1  210    2-231    47-262 (285)
130 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.6E-39 5.7E-44  279.9  16.7  215    2-236    67-298 (304)
131 cd05619 STKc_nPKC_theta Cataly 100.0 2.4E-39 5.2E-44  281.4  16.4  204    3-230    43-248 (316)
132 cd05044 PTKc_c-ros Catalytic d 100.0 4.8E-39   1E-43  273.2  17.8  211    2-232    46-268 (269)
133 cd05591 STKc_nPKC_epsilon Cata 100.0   1E-39 2.2E-44  284.5  14.0  206    2-231    42-255 (321)
134 cd05618 STKc_aPKC_iota Catalyt 100.0 2.9E-39 6.3E-44  282.4  16.8  212    2-230    42-262 (329)
135 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.8E-39 1.5E-43  271.5  18.5  202    2-231    51-261 (262)
136 KOG0577 Serine/threonine prote 100.0 5.4E-41 1.2E-45  293.2   5.7  204    2-231    73-279 (948)
137 cd05085 PTKc_Fer Catalytic dom 100.0 7.2E-39 1.6E-43  269.3  18.5  210    2-232    39-249 (250)
138 cd05072 PTKc_Lyn Catalytic dom 100.0 3.8E-39 8.2E-44  272.7  16.9  211    2-233    48-260 (261)
139 cd05075 PTKc_Axl Catalytic dom 100.0 4.6E-39   1E-43  273.8  17.4  212    2-233    47-270 (272)
140 cd05596 STKc_ROCK Catalytic do 100.0   1E-39 2.2E-44  289.5  13.9  211    2-232    90-306 (370)
141 cd08529 STKc_FA2-like Catalyti 100.0 4.7E-39   1E-43  271.2  17.1  207    2-230    46-253 (256)
142 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.3E-40 9.3E-45  290.3  11.2  211    2-231    48-286 (350)
143 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.9E-39 8.4E-44  276.0  16.7  226    2-234    53-281 (283)
144 KOG2345 Serine/threonine prote 100.0 6.7E-40 1.5E-44  258.8  10.8  217    3-234    66-300 (302)
145 KOG0667 Dual-specificity tyros 100.0 5.3E-39 1.1E-43  285.0  17.8  221    3-232   230-504 (586)
146 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.5E-39 5.5E-44  280.3  15.5  213    2-234    70-299 (307)
147 cd05109 PTKc_HER2 Catalytic do 100.0 4.5E-39 9.8E-44  275.0  16.8  213    2-235    56-269 (279)
148 KOG0694 Serine/threonine prote 100.0 9.8E-40 2.1E-44  290.3  13.0  203    3-230   416-624 (694)
149 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.5E-39 1.6E-43  272.0  17.9  213    2-234    53-267 (268)
150 cd05035 PTKc_Axl_like Catalyti 100.0 4.3E-39 9.3E-44  274.0  16.4  213    2-234    48-272 (273)
151 cd05054 PTKc_VEGFR Catalytic d 100.0 5.6E-39 1.2E-43  281.4  17.6  214    2-234    57-333 (337)
152 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.8E-39 1.3E-43  278.9  17.3  214    2-235    64-294 (314)
153 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-39   9E-44  277.7  16.2  212    2-236    49-277 (297)
154 PTZ00036 glycogen synthase kin 100.0 2.6E-39 5.6E-44  292.7  15.5  223    3-232   107-353 (440)
155 cd05060 PTKc_Syk_like Catalyti 100.0 5.7E-39 1.2E-43  271.1  16.6  212    2-235    43-256 (257)
156 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-38 2.4E-43  268.3  18.2  211    2-232    39-250 (251)
157 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0   1E-38 2.3E-43  272.1  18.2  203    2-232    63-274 (274)
158 cd05097 PTKc_DDR_like Catalyti 100.0 2.5E-38 5.4E-43  272.6  20.7  218    2-232    64-294 (295)
159 cd06612 STKc_MST1_2 Catalytic  100.0 1.1E-38 2.3E-43  269.0  18.0  210    1-230    44-253 (256)
160 cd05050 PTKc_Musk Catalytic do 100.0 6.2E-39 1.3E-43  275.4  16.8  211    2-232    55-287 (288)
161 cd05604 STKc_SGK3 Catalytic do 100.0 5.5E-39 1.2E-43  280.4  16.7  212    4-239    44-256 (325)
162 cd05047 PTKc_Tie Catalytic dom 100.0 6.3E-39 1.4E-43  272.8  16.6  210    2-234    42-268 (270)
163 cd05621 STKc_ROCK2 Catalytic d 100.0 5.8E-39 1.2E-43  284.5  17.0  211    2-232    90-306 (370)
164 cd05040 PTKc_Ack_like Catalyti 100.0 7.8E-39 1.7E-43  270.1  17.0  211    2-232    43-256 (257)
165 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.6E-39 1.4E-43  270.9  16.5  203    2-232    46-258 (258)
166 cd05095 PTKc_DDR2 Catalytic do 100.0 1.6E-38 3.4E-43  274.0  19.2  218    2-232    66-295 (296)
167 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-38 2.6E-43  270.5  18.2  214    2-234    49-265 (267)
168 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-38   3E-43  276.9  18.8  225    2-230    45-314 (317)
169 cd05065 PTKc_EphR_B Catalytic  100.0 7.7E-39 1.7E-43  272.1  16.8  213    1-233    51-267 (269)
170 cd05066 PTKc_EphR_A Catalytic  100.0 1.2E-38 2.6E-43  270.6  17.9  212    2-233    52-265 (267)
171 PTZ00283 serine/threonine prot 100.0 4.5E-39 9.8E-44  294.5  16.2  209    2-230    78-297 (496)
172 cd06613 STKc_MAP4K3_like Catal 100.0 1.9E-38 4.1E-43  268.4  18.9  211    2-230    47-260 (262)
173 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-38 2.3E-43  278.8  17.9  225    2-231    46-308 (327)
174 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-38 3.6E-43  269.7  18.0  214    2-234    49-265 (267)
175 cd06615 PKc_MEK Catalytic doma 100.0 1.9E-38 4.2E-43  274.9  18.3  220    2-232    46-289 (308)
176 cd05587 STKc_cPKC Catalytic do 100.0 5.8E-39 1.2E-43  280.1  15.0  199    2-224    47-246 (324)
177 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-38 3.4E-43  270.3  17.3  215    2-232    42-268 (269)
178 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.3E-39 1.8E-43  280.3  15.9  215    2-236    64-295 (334)
179 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-38 2.4E-43  276.5  16.6  224    2-231    51-287 (309)
180 cd05042 PTKc_Aatyk Catalytic d 100.0 1.3E-38 2.8E-43  270.7  16.6  214    2-231    42-267 (269)
181 cd05088 PTKc_Tie2 Catalytic do 100.0 7.1E-39 1.5E-43  277.0  15.1  210    2-234    54-280 (303)
182 cd05586 STKc_Sck1_like Catalyt 100.0 2.4E-39 5.2E-44  283.3  12.2  205    3-230    41-253 (330)
183 cd06643 STKc_SLK Catalytic dom 100.0   2E-38 4.3E-43  271.4  17.6  211    2-232    49-264 (282)
184 cd05061 PTKc_InsR Catalytic do 100.0 2.2E-38 4.7E-43  272.0  17.9  212    2-233    56-277 (288)
185 cd05082 PTKc_Csk Catalytic dom 100.0   2E-38 4.4E-43  267.6  17.2  207    2-233    46-255 (256)
186 cd05112 PTKc_Itk Catalytic dom 100.0   2E-38 4.2E-43  267.6  17.1  210    2-232    46-256 (256)
187 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-38   5E-43  270.6  17.7  212    2-234    56-268 (279)
188 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0   2E-38 4.3E-43  271.6  17.3  226    2-234    52-283 (284)
189 cd05058 PTKc_Met_Ron Catalytic 100.0 2.1E-38 4.6E-43  268.2  17.2  213    2-234    43-259 (262)
190 cd06646 STKc_MAP4K5 Catalytic  100.0 2.2E-38 4.7E-43  269.0  17.0  211    2-231    53-266 (267)
191 cd06628 STKc_MAPKKK_Byr2_like  100.0 1.6E-38 3.5E-43  269.7  16.2  208    2-230    53-264 (267)
192 cd08221 STKc_Nek9 Catalytic do 100.0 2.3E-38   5E-43  267.1  16.9  208    2-231    46-254 (256)
193 cd05622 STKc_ROCK1 Catalytic d 100.0 8.8E-39 1.9E-43  283.6  14.9  211    2-232    90-306 (371)
194 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.4E-38 3.1E-43  272.6  15.6  218    2-233    53-282 (284)
195 cd05627 STKc_NDR2 Catalytic do 100.0 2.9E-39 6.3E-44  286.0  11.5  210    2-230    48-293 (360)
196 cd07853 STKc_NLK Catalytic dom 100.0   1E-38 2.2E-43  283.7  15.0  224    2-231    46-289 (372)
197 cd08219 STKc_Nek3 Catalytic do 100.0 2.4E-38 5.2E-43  266.9  16.5  207    2-230    45-252 (255)
198 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.1E-38 1.3E-42  264.9  18.9  202    2-232    48-259 (259)
199 cd05071 PTKc_Src Catalytic dom 100.0 5.3E-38 1.2E-42  266.0  18.5  210    2-233    48-259 (262)
200 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-38 2.8E-43  273.1  14.8  210    2-231    47-262 (285)
201 cd05069 PTKc_Yes Catalytic dom 100.0 6.4E-38 1.4E-42  265.2  18.9  210    2-233    48-259 (260)
202 cd05616 STKc_cPKC_beta Catalyt 100.0 8.6E-39 1.9E-43  278.9  13.9  199    2-224    47-246 (323)
203 cd05039 PTKc_Csk_like Catalyti 100.0 4.5E-38 9.6E-43  265.4  17.8  207    2-233    47-255 (256)
204 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-38 3.5E-43  274.8  15.5  212    2-234    56-268 (303)
205 cd06619 PKc_MKK5 Catalytic dom 100.0 3.5E-38 7.7E-43  269.5  17.4  209    2-232    46-255 (279)
206 cd06645 STKc_MAP4K3 Catalytic  100.0 2.4E-38 5.2E-43  268.7  16.1  210    2-230    53-265 (267)
207 cd07839 STKc_CDK5 Catalytic do 100.0 2.9E-38 6.4E-43  270.6  16.4  222    2-231    46-282 (284)
208 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.9E-38 1.1E-42  265.8  17.5  210    2-233    48-259 (260)
209 cd05043 PTK_Ryk Pseudokinase d 100.0   5E-38 1.1E-42  268.6  17.7  213    2-234    55-276 (280)
210 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.4E-38 5.2E-43  282.4  16.3  214    2-234    87-399 (401)
211 cd05086 PTKc_Aatyk2 Catalytic  100.0 8.3E-38 1.8E-42  265.7  19.0  215    2-232    42-267 (268)
212 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.9E-38 1.9E-42  265.0  19.1  214    2-234    49-265 (267)
213 cd06654 STKc_PAK1 Catalytic do 100.0 5.1E-38 1.1E-42  270.8  17.6  207    2-230    64-270 (296)
214 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-37 2.3E-42  272.8  19.8  214    2-232    48-268 (331)
215 KOG4645 MAPKKK (MAP kinase kin 100.0 4.9E-40 1.1E-44  308.6   5.2  209    2-231  1281-1495(1509)
216 cd07867 STKc_CDC2L6 Catalytic  100.0   4E-38 8.6E-43  274.0  16.9  226    2-231    45-315 (317)
217 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.4E-38 5.2E-43  270.9  15.3  229    1-234    52-283 (284)
218 cd05056 PTKc_FAK Catalytic dom 100.0 3.8E-38 8.2E-43  268.0  16.3  212    2-235    54-266 (270)
219 cd07861 STKc_CDK1_euk Catalyti 100.0 4.7E-38   1E-42  269.4  16.7  223    2-230    46-282 (285)
220 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.5E-38 1.2E-42  271.2  17.2  225    2-232    51-288 (301)
221 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.4E-38 1.4E-42  267.6  17.5  206    2-231    49-254 (277)
222 cd07876 STKc_JNK2 Catalytic do 100.0 5.9E-38 1.3E-42  277.6  17.7  221    2-232    67-317 (359)
223 cd06640 STKc_MST4 Catalytic do 100.0 1.9E-37 4.1E-42  264.7  20.0  207    2-232    49-255 (277)
224 cd05623 STKc_MRCK_alpha Cataly 100.0 4.4E-38 9.6E-43  275.4  16.3  213    2-231    48-267 (332)
225 cd05632 STKc_GRK5 Catalytic do 100.0 4.7E-38   1E-42  269.6  16.1  209    2-230    47-261 (285)
226 cd06644 STKc_STK10_LOK Catalyt 100.0 1.3E-37 2.7E-42  267.8  18.7  209    2-230    56-269 (292)
227 PTZ00266 NIMA-related protein  100.0 1.1E-37 2.4E-42  295.8  19.8  209    2-230    59-295 (1021)
228 smart00219 TyrKc Tyrosine kina 100.0 1.1E-37 2.3E-42  263.0  17.6  209    2-231    48-258 (258)
229 cd05034 PTKc_Src_like Catalyti 100.0 7.7E-38 1.7E-42  264.7  16.7  211    2-233    48-260 (261)
230 cd06631 STKc_YSK4 Catalytic do 100.0 4.9E-38 1.1E-42  266.5  15.5  210    2-230    49-262 (265)
231 cd07874 STKc_JNK3 Catalytic do 100.0 3.7E-38   8E-43  278.5  15.2  221    2-232    63-313 (355)
232 cd07863 STKc_CDK4 Catalytic do 100.0 3.9E-38 8.4E-43  270.3  14.9  222    2-230    46-285 (288)
233 KOG1094 Discoidin domain recep 100.0 7.3E-39 1.6E-43  279.5  10.4  220    1-233   581-803 (807)
234 cd06609 STKc_MST3_like Catalyt 100.0   9E-38 1.9E-42  266.2  17.0  207    2-231    46-252 (274)
235 cd06611 STKc_SLK_like Catalyti 100.0 4.8E-38   1E-42  268.7  15.3  210    2-231    49-263 (280)
236 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.4E-37 3.1E-42  266.4  18.0  214    2-233    50-269 (284)
237 cd07875 STKc_JNK1 Catalytic do 100.0 5.1E-38 1.1E-42  278.4  15.7  221    2-232    70-320 (364)
238 PHA03210 serine/threonine kina 100.0 9.5E-38 2.1E-42  286.5  17.9  225    2-231   210-455 (501)
239 KOG0666 Cyclin C-dependent kin 100.0   1E-38 2.3E-43  259.7  10.2  224    4-231    76-338 (438)
240 PTZ00284 protein kinase; Provi 100.0 6.2E-38 1.3E-42  286.4  16.5  222    2-233   172-441 (467)
241 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-37 2.6E-42  264.5  17.1  212    2-230    50-264 (268)
242 KOG0604 MAP kinase-activated p 100.0 2.8E-38 6.2E-43  255.9  12.5  214    3-232   102-324 (400)
243 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-37 2.7E-42  262.7  17.0  207    2-230    46-254 (257)
244 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-37 3.1E-42  263.0  17.2  210    2-233    48-259 (260)
245 cd05615 STKc_cPKC_alpha Cataly 100.0 5.5E-38 1.2E-42  273.8  15.0  199    2-224    47-246 (323)
246 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-37 2.9E-42  268.1  17.0  208    2-231    63-270 (296)
247 cd06624 STKc_ASK Catalytic dom 100.0 2.4E-37 5.1E-42  262.8  18.1  210    2-231    52-266 (268)
248 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-37 2.6E-42  266.9  16.4  223    2-230    47-283 (286)
249 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-37 2.5E-42  265.2  16.0  208    2-230    49-269 (272)
250 cd06629 STKc_MAPKKK_Bck1_like  100.0 1.7E-37 3.7E-42  264.2  17.0  214    2-231    55-270 (272)
251 cd05073 PTKc_Hck Catalytic dom 100.0   2E-37 4.4E-42  262.1  17.3  210    2-233    48-259 (260)
252 cd07878 STKc_p38beta_MAPK11 Ca 100.0   7E-38 1.5E-42  275.4  14.9  219    2-231    61-299 (343)
253 cd05046 PTK_CCK4 Pseudokinase  100.0 1.6E-37 3.5E-42  264.7  16.7  211    2-232    55-274 (275)
254 cd06605 PKc_MAPKK Catalytic do 100.0 9.4E-38   2E-42  264.7  15.1  211    2-230    46-257 (265)
255 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-37 2.6E-42  267.1  15.8  209    2-231    46-263 (286)
256 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-37 5.4E-42  266.6  17.7  207    2-230    63-269 (297)
257 KOG4257 Focal adhesion tyrosin 100.0 9.8E-38 2.1E-42  274.3  15.2  211    2-234   438-649 (974)
258 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-37 2.5E-42  272.7  15.7  213    2-231    48-267 (331)
259 cd08216 PK_STRAD Pseudokinase  100.0 3.8E-37 8.3E-42  267.5  18.9  225    2-231    46-296 (314)
260 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-37 2.9E-42  266.6  15.7  222    2-231    46-283 (286)
261 cd06651 STKc_MEKK3 Catalytic d 100.0   3E-37 6.6E-42  261.9  17.6  209    2-231    51-262 (266)
262 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-37 5.3E-42  265.8  17.1  221    2-230    50-288 (291)
263 KOG4278 Protein tyrosine kinas 100.0 1.9E-38 4.2E-43  278.9  10.2  213    1-234   309-523 (1157)
264 cd07833 STKc_CDKL Catalytic do 100.0 1.8E-37 3.9E-42  266.1  16.0  224    2-230    47-285 (288)
265 cd05083 PTKc_Chk Catalytic dom 100.0 3.5E-37 7.6E-42  259.7  17.5  206    2-233    46-253 (254)
266 PF00069 Pkinase:  Protein kina 100.0   8E-38 1.7E-42  264.2  13.3  212    3-231    46-258 (260)
267 cd05580 STKc_PKA Catalytic dom 100.0 2.5E-37 5.4E-42  265.8  16.5  202    2-230    48-254 (290)
268 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-37 2.4E-42  268.1  14.1  207    2-230    66-272 (292)
269 cd05103 PTKc_VEGFR2 Catalytic  100.0 2.1E-37 4.6E-42  272.3  16.1  214    2-234    57-339 (343)
270 KOG0986 G protein-coupled rece 100.0 4.5E-38 9.7E-43  267.4  11.0  203    3-225   233-436 (591)
271 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.4E-37 9.5E-42  260.7  17.1  213    2-230    46-264 (267)
272 cd05572 STKc_cGK_PKG Catalytic 100.0 3.5E-37 7.7E-42  260.8  16.5  208    2-230    40-252 (262)
273 cd05574 STKc_phototropin_like  100.0 4.7E-37   1E-41  267.2  17.6  210    2-230    48-289 (316)
274 cd06659 STKc_PAK6 Catalytic do 100.0 1.6E-37 3.5E-42  267.7  14.4  208    2-231    65-272 (297)
275 PRK13184 pknD serine/threonine 100.0 5.4E-37 1.2E-41  289.9  18.5  214    2-233    49-289 (932)
276 cd07843 STKc_CDC2L1 Catalytic  100.0 3.7E-37 8.1E-42  265.0  16.1  223    2-230    51-290 (293)
277 cd06638 STKc_myosinIIIA Cataly 100.0   4E-37 8.6E-42  263.8  16.1  210    2-231    61-284 (286)
278 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-36 2.8E-41  260.9  19.3  216    2-232    46-268 (287)
279 cd05577 STKc_GRK Catalytic dom 100.0 5.2E-37 1.1E-41  262.0  16.7  209    2-230    40-254 (277)
280 cd08217 STKc_Nek2 Catalytic do 100.0 5.5E-37 1.2E-41  259.6  16.5  207    2-230    46-262 (265)
281 cd07841 STKc_CDK7 Catalytic do 100.0   1E-36 2.2E-41  262.8  18.5  223    2-230    49-282 (298)
282 cd08220 STKc_Nek8 Catalytic do 100.0 5.1E-37 1.1E-41  258.8  16.2  206    2-230    46-253 (256)
283 cd06648 STKc_PAK_II Catalytic  100.0   4E-37 8.6E-42  263.8  15.8  207    2-230    63-269 (285)
284 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-37 6.7E-42  260.2  14.8  207    2-230    46-253 (256)
285 cd05609 STKc_MAST Catalytic do 100.0 4.2E-37 9.1E-42  266.2  16.0  210    2-230    48-273 (305)
286 KOG0196 Tyrosine kinase, EPH ( 100.0 5.5E-39 1.2E-43  288.3   4.2  215    1-235   676-892 (996)
287 cd06652 STKc_MEKK2 Catalytic d 100.0 9.3E-37   2E-41  258.7  17.7  209    2-231    51-262 (265)
288 cd06632 STKc_MEKK1_plant Catal 100.0 6.5E-37 1.4E-41  258.3  15.9  206    2-230    49-255 (258)
289 cd05074 PTKc_Tyro3 Catalytic d 100.0   9E-37   2E-41  259.8  16.8  213    2-234    48-272 (273)
290 cd06608 STKc_myosinIII_like Ca 100.0 5.7E-37 1.2E-41  261.0  15.5  209    2-230    49-272 (275)
291 cd08226 PK_STRAD_beta Pseudoki 100.0 8.6E-37 1.9E-41  266.9  16.9  225    2-231    46-309 (328)
292 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.5E-37 9.8E-42  263.0  14.5  208    2-230    59-279 (282)
293 KOG0199 ACK and related non-re 100.0 1.3E-37 2.8E-42  276.6  11.3  209    1-230   157-368 (1039)
294 cd08528 STKc_Nek10 Catalytic d 100.0 2.5E-36 5.4E-41  256.6  18.7  209    2-232    55-268 (269)
295 KOG0586 Serine/threonine prote 100.0 1.9E-37 4.1E-42  272.8  12.1  206    2-232   102-308 (596)
296 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.9E-37 1.3E-41  262.7  14.7  223    2-230    47-283 (286)
297 cd05578 STKc_Yank1 Catalytic d 100.0   4E-37 8.8E-42  259.9  13.2  207    2-230    47-255 (258)
298 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-36 4.2E-41  262.3  17.6  205    2-232    62-269 (307)
299 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-36 2.4E-41  260.3  15.7  200    9-231    51-256 (279)
300 cd06917 STKc_NAK1_like Catalyt 100.0 1.9E-36   4E-41  258.5  17.0  206    2-230    46-255 (277)
301 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-36 4.8E-41  259.9  17.0  223    2-230    50-288 (291)
302 cd06623 PKc_MAPKK_plant_like C 100.0 2.5E-36 5.4E-41  255.6  17.0  209    2-230    46-256 (264)
303 cd06614 STKc_PAK Catalytic dom 100.0 1.5E-36 3.3E-41  260.3  15.7  210    2-231    62-271 (286)
304 cd06647 STKc_PAK_I Catalytic d 100.0   3E-36 6.5E-41  259.4  17.6  207    2-230    63-269 (293)
305 cd06606 STKc_MAPKKK Catalytic  100.0 2.8E-36   6E-41  254.2  17.0  211    2-231    46-258 (260)
306 cd06641 STKc_MST3 Catalytic do 100.0 3.6E-36 7.8E-41  256.8  17.8  205    2-230    49-253 (277)
307 cd05122 PKc_STE Catalytic doma 100.0 2.6E-36 5.6E-41  253.3  16.6  208    2-230    44-251 (253)
308 cd07860 STKc_CDK2_3 Catalytic  100.0 9.3E-37   2E-41  261.3  14.1  220    2-230    46-281 (284)
309 cd07865 STKc_CDK9 Catalytic do 100.0 1.9E-36   4E-41  262.5  16.1  225    2-230    58-307 (310)
310 cd07842 STKc_CDK8_like Catalyt 100.0 3.3E-36 7.1E-41  261.7  17.6  225    2-230    49-313 (316)
311 cd06639 STKc_myosinIIIB Cataly 100.0 2.5E-36 5.5E-41  259.6  16.6  209    2-230    65-287 (291)
312 cd06635 STKc_TAO1 Catalytic do 100.0 6.6E-36 1.4E-40  260.1  19.3  209    2-236    72-283 (317)
313 cd05118 STKc_CMGC Catalytic do 100.0 1.6E-36 3.4E-41  259.5  14.9  220    2-230    45-280 (283)
314 cd07831 STKc_MOK Catalytic dom 100.0 3.5E-36 7.5E-41  257.3  16.9  217    3-230    45-279 (282)
315 KOG0603 Ribosomal protein S6 k 100.0 4.8E-37   1E-41  271.6  11.7  202    3-233   363-566 (612)
316 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-36 4.8E-41  255.0  15.2  207    2-230    46-254 (257)
317 cd07845 STKc_CDK10 Catalytic d 100.0 2.8E-36 6.1E-41  261.5  16.2  224    2-231    53-291 (309)
318 cd08530 STKc_CNK2-like Catalyt 100.0 2.8E-36 6.1E-41  254.2  15.4  206    2-231    46-254 (256)
319 cd07850 STKc_JNK Catalytic dom 100.0 3.5E-36 7.6E-41  265.6  16.6  220    2-231    62-312 (353)
320 cd06626 STKc_MEKK4 Catalytic d 100.0 5.6E-36 1.2E-40  253.5  17.1  211    2-230    46-261 (264)
321 cd07835 STKc_CDK1_like Catalyt 100.0 2.8E-36   6E-41  258.2  14.8  221    2-230    45-280 (283)
322 cd06657 STKc_PAK4 Catalytic do 100.0 4.3E-36 9.4E-41  258.2  16.0  207    2-230    64-270 (292)
323 cd06616 PKc_MKK4 Catalytic dom 100.0 4.1E-36   9E-41  257.8  15.8  211    2-231    49-268 (288)
324 cd08215 STKc_Nek Catalytic dom 100.0 4.8E-36   1E-40  252.7  15.7  207    2-230    46-255 (258)
325 cd05611 STKc_Rim15_like Cataly 100.0 4.8E-36 1.1E-40  253.6  15.4  203    4-230    45-251 (260)
326 PHA03390 pk1 serine/threonine- 100.0 1.5E-35 3.3E-40  251.6  18.5  194   13-230    67-262 (267)
327 cd05579 STKc_MAST_like Catalyt 100.0   2E-36 4.3E-41  256.2  13.0  208    2-229    40-256 (265)
328 cd06653 STKc_MEKK3_like_1 Cata 100.0 9.9E-36 2.1E-40  252.3  17.3  209    2-231    51-262 (264)
329 cd05606 STKc_beta_ARK Catalyti 100.0 6.7E-36 1.5E-40  255.3  16.3  202    7-231    49-256 (278)
330 cd07836 STKc_Pho85 Catalytic d 100.0 7.6E-36 1.6E-40  255.6  16.5  223    2-230    45-281 (284)
331 KOG0669 Cyclin T-dependent kin 100.0 8.3E-37 1.8E-41  242.1   8.9  226    3-232    64-317 (376)
332 cd06633 STKc_TAO3 Catalytic do 100.0 1.9E-35   4E-40  256.8  18.2  204    2-231    68-274 (313)
333 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-35 2.6E-40  257.5  16.8  208    2-235    62-272 (308)
334 cd07852 STKc_MAPK15 Catalytic  100.0 6.5E-36 1.4E-40  262.3  15.3  223    2-230    53-295 (337)
335 PLN00009 cyclin-dependent kina 100.0 7.4E-36 1.6E-40  257.0  15.3  223    2-230    48-284 (294)
336 cd05576 STKc_RPK118_like Catal 100.0 6.4E-36 1.4E-40  249.5  14.4  198    2-230    32-234 (237)
337 cd07840 STKc_CDK9_like Catalyt 100.0 6.3E-36 1.4E-40  256.2  14.4  224    2-230    45-284 (287)
338 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.8E-36 1.7E-40  255.4  14.7  207    3-231    47-262 (283)
339 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-35 2.4E-40  256.0  15.7  221    2-230    47-291 (295)
340 PLN00113 leucine-rich repeat r 100.0 3.4E-35 7.4E-40  290.4  21.3  221    3-236   731-953 (968)
341 KOG0607 MAP kinase-interacting 100.0 4.5E-36 9.6E-41  245.2  11.9  219    3-232   123-363 (463)
342 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-35   4E-40  248.8  16.1  206    2-230    46-251 (254)
343 KOG0983 Mitogen-activated prot 100.0 1.5E-36 3.2E-41  243.2   8.8  200   13-232   149-351 (391)
344 KOG0690 Serine/threonine prote 100.0 1.5E-36 3.2E-41  248.7   8.5  203    4-230   217-424 (516)
345 PHA02882 putative serine/threo 100.0   8E-35 1.7E-39  250.6  19.4  210    7-231    75-293 (294)
346 PTZ00024 cyclin-dependent prot 100.0 2.8E-35 6.2E-40  258.1  16.7  226    2-232    67-315 (335)
347 cd07855 STKc_ERK5 Catalytic do 100.0 7.4E-36 1.6E-40  261.7  12.6  226    2-232    51-296 (334)
348 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-35 3.8E-40  256.5  14.6  224    2-230    54-308 (311)
349 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-35   5E-40  258.7  15.2  220    2-230    50-292 (336)
350 KOG0614 cGMP-dependent protein 100.0 1.2E-36 2.6E-41  261.9   6.7  206    3-231   468-678 (732)
351 cd05613 STKc_MSK1_N N-terminal 100.0 5.4E-35 1.2E-39  251.2  17.0  210    2-230    51-268 (290)
352 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-35 2.9E-40  253.2  13.1  207    2-230    48-277 (280)
353 cd07864 STKc_CDK12 Catalytic d 100.0 3.2E-35   7E-40  253.9  15.5  223    2-230    53-299 (302)
354 cd08222 STKc_Nek11 Catalytic d 100.0 2.7E-35   6E-40  249.0  14.5  206    2-230    49-257 (260)
355 KOG0662 Cyclin-dependent kinas 100.0 6.4E-36 1.4E-40  226.1   9.1  222    3-230    49-283 (292)
356 cd07834 STKc_MAPK Catalytic do 100.0 1.3E-35 2.8E-40  259.7  12.4  225    2-231    46-290 (330)
357 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-35 8.9E-40  246.3  15.0  205    2-230    40-247 (250)
358 cd05583 STKc_MSK_N N-terminal  100.0 6.8E-35 1.5E-39  250.3  16.6  212    2-232    51-265 (288)
359 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.7E-35 1.4E-39  255.9  16.7  221    2-230    51-291 (337)
360 cd07829 STKc_CDK_like Catalyti 100.0 3.1E-35 6.7E-40  251.4  14.2  222    2-230    45-279 (282)
361 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-34 2.7E-39  248.2  17.9  221    2-230    45-284 (287)
362 KOG4250 TANK binding protein k 100.0   5E-35 1.1E-39  261.1  15.4  223    3-231    59-307 (732)
363 cd07857 STKc_MPK1 Catalytic do 100.0 1.2E-34 2.6E-39  253.8  16.7  225    2-231    48-293 (332)
364 cd06618 PKc_MKK7 Catalytic dom 100.0 6.5E-35 1.4E-39  251.4  14.5  210    2-232    60-275 (296)
365 cd07830 STKc_MAK_like Catalyti 100.0 1.6E-34 3.4E-39  247.3  15.9  220    3-230    45-280 (283)
366 KOG0200 Fibroblast/platelet-de 100.0 1.2E-34 2.5E-39  270.4  15.3  213    1-233   347-578 (609)
367 KOG0587 Traf2- and Nck-interac 100.0 1.1E-34 2.3E-39  263.9  14.5  211    1-231    61-283 (953)
368 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-34 2.8E-39  254.6  13.7  217    2-230    61-297 (342)
369 KOG0671 LAMMER dual specificit 100.0 1.5E-35 3.1E-40  247.4   7.0  220    3-231   133-407 (415)
370 cd07851 STKc_p38 Catalytic dom 100.0 5.8E-35 1.2E-39  256.9  11.3  219    2-231    61-299 (343)
371 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-34 4.1E-39  253.5  14.2  224    2-231    49-301 (342)
372 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.5E-34 1.4E-38  248.6  17.0  219    2-231    56-289 (328)
373 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.5E-34 7.6E-39  252.1  14.9  219    2-231    63-301 (345)
374 KOG1151 Tousled-like protein k 100.0 2.6E-34 5.6E-39  244.3  13.4  213    4-230   516-741 (775)
375 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.7E-34 5.9E-39  252.5  14.0  218    2-230    61-298 (343)
376 KOG0665 Jun-N-terminal kinase  100.0 8.2E-35 1.8E-39  237.8   7.4  219    3-231    63-311 (369)
377 cd05610 STKc_MASTL Catalytic d 100.0 1.4E-33 3.1E-38  266.6  16.1  102    2-107    51-152 (669)
378 KOG0696 Serine/threonine prote 100.0 3.1E-34 6.7E-39  241.8  10.1  194    5-222   399-593 (683)
379 smart00220 S_TKc Serine/Threon 100.0 2.6E-33 5.6E-38  233.6  15.6  208    2-230    34-241 (244)
380 KOG0612 Rho-associated, coiled 100.0 5.2E-34 1.1E-38  265.2  10.3  210    2-231   122-339 (1317)
381 KOG0608 Warts/lats-like serine 100.0 1.5E-32 3.2E-37  242.3  16.0  201    3-222   677-917 (1034)
382 KOG1006 Mitogen-activated prot 100.0   9E-35 1.9E-39  232.1   1.9  212    2-230   109-327 (361)
383 KOG4236 Serine/threonine prote 100.0 4.8E-34   1E-38  247.1   5.6  210    1-232   609-821 (888)
384 KOG1027 Serine/threonine prote 100.0 1.2E-33 2.6E-38  255.9   8.3  208    3-231   550-768 (903)
385 KOG1025 Epidermal growth facto 100.0 1.9E-33   4E-38  254.0   7.9  211    1-232   744-955 (1177)
386 PLN00181 protein SPA1-RELATED; 100.0 6.3E-33 1.4E-37  268.0   9.3  201    9-232    26-267 (793)
387 KOG3653 Transforming growth fa 100.0 1.8E-31 3.8E-36  228.4  15.8  228    2-236   249-505 (534)
388 KOG0664 Nemo-like MAPK-related 100.0 1.2E-33 2.7E-38  226.7   1.5  225    2-232    99-345 (449)
389 KOG0695 Serine/threonine prote 100.0 1.2E-31 2.6E-36  221.0  11.8  203    4-223   299-503 (593)
390 KOG0668 Casein kinase II, alph 100.0 2.1E-31 4.5E-36  208.7  11.5  215    2-230    79-322 (338)
391 KOG0670 U4/U6-associated splic 100.0 2.6E-32 5.6E-37  235.8   4.8  221    3-231   476-747 (752)
392 KOG0984 Mitogen-activated prot 100.0 1.5E-31 3.2E-36  206.4   8.0  156    3-164    92-255 (282)
393 KOG1035 eIF-2alpha kinase GCN2 100.0 5.4E-31 1.2E-35  246.9  13.0  183   29-230   670-871 (1351)
394 smart00750 KIND kinase non-cat 100.0 2.1E-30 4.5E-35  206.3  14.7  166   40-233     1-168 (176)
395 KOG1024 Receptor-like protein  100.0 9.1E-31   2E-35  219.4  12.9  211    2-232   334-553 (563)
396 KOG1290 Serine/threonine prote 100.0 2.7E-30 5.8E-35  221.9  15.7  223    3-233   122-553 (590)
397 KOG2052 Activin A type IB rece 100.0 2.1E-30 4.6E-35  220.3  14.9  226    2-236   250-505 (513)
398 PLN03225 Serine/threonine-prot 100.0 3.2E-30 6.9E-35  238.5  14.0  200   25-232   205-452 (566)
399 cd00180 PKc Catalytic domain o 100.0 3.4E-29 7.5E-34  203.9  17.2  176    2-231    38-215 (215)
400 PLN03224 probable serine/threo 100.0 3.3E-29 7.1E-34  226.7  16.5  214    4-232   221-502 (507)
401 KOG0576 Mitogen-activated prot 100.0 5.7E-31 1.2E-35  233.4   4.7  210    2-230    59-271 (829)
402 KOG1345 Serine/threonine kinas 100.0 4.6E-30 9.9E-35  205.8   7.1  211    1-231    66-288 (378)
403 KOG1152 Signal transduction se 100.0 1.1E-29 2.5E-34  222.0   7.3  151    4-162   615-770 (772)
404 smart00221 STYKc Protein kinas  99.9 1.4E-26   3E-31  191.0  14.8  158    2-163    44-202 (225)
405 KOG1167 Serine/threonine prote  99.9 7.1E-27 1.5E-31  197.9  10.7  223    2-231    81-382 (418)
406 KOG0590 Checkpoint kinase and   99.9 3.3E-27 7.2E-32  218.1   5.1  213    4-230   370-585 (601)
407 KOG1023 Natriuretic peptide re  99.9 7.7E-24 1.7E-28  187.7  12.8  218    9-237     1-227 (484)
408 COG0515 SPS1 Serine/threonine   99.9 1.6E-22 3.4E-27  175.6  19.9  220    2-230    44-275 (384)
409 KOG0195 Integrin-linked kinase  99.9 3.9E-24 8.4E-29  172.2   7.5  208    1-234   233-446 (448)
410 KOG1164 Casein kinase (serine/  99.9 1.3E-22 2.8E-27  176.5  15.9  215    2-233    63-296 (322)
411 KOG1165 Casein kinase (serine/  99.9 3.3E-22 7.1E-27  165.1  12.4  217    1-231    69-296 (449)
412 KOG4158 BRPK/PTEN-induced prot  99.9 1.3E-21 2.7E-26  165.3  11.9  197   13-231   274-511 (598)
413 KOG1240 Protein kinase contain  99.9 9.7E-23 2.1E-27  190.4   4.2  208    5-235    72-296 (1431)
414 KOG1033 eIF-2alpha kinase PEK/  99.9 6.6E-23 1.4E-27  178.9   2.6  173   29-227   330-509 (516)
415 KOG1163 Casein kinase (serine/  99.9 1.4E-21 2.9E-26  154.9   9.2  218    1-232    56-282 (341)
416 KOG0603 Ribosomal protein S6 k  99.8 1.3E-21 2.9E-26  174.0   7.9  188    3-224    44-232 (612)
417 PRK12274 serine/threonine prot  99.8 2.1E-20 4.6E-25  148.8  11.9  149    2-165    48-211 (218)
418 PRK09188 serine/threonine prot  99.8 7.7E-21 1.7E-25  165.6  10.2  119    2-135    68-194 (365)
419 PRK10359 lipopolysaccharide co  99.8 2.4E-20 5.3E-25  151.5   6.0  128    2-156    82-217 (232)
420 PF14531 Kinase-like:  Kinase-l  99.8 7.4E-20 1.6E-24  153.1   9.0  161   30-221   114-288 (288)
421 PRK10345 hypothetical protein;  99.8 3.8E-18 8.3E-23  138.2   9.9   99    2-107    43-157 (210)
422 cd05147 RIO1_euk RIO kinase fa  99.7 4.5E-18 9.7E-23  136.4   8.7   99    4-109    68-167 (190)
423 KOG0606 Microtubule-associated  99.7 9.7E-19 2.1E-23  163.6   4.5  139   66-222   153-304 (1205)
424 cd05145 RIO1_like RIO kinase f  99.7 1.5E-17 3.2E-22  133.8  10.0  101    3-110    67-168 (190)
425 KOG0590 Checkpoint kinase and   99.7 6.4E-19 1.4E-23  163.3   1.0  210    5-230    70-286 (601)
426 KOG1266 Protein kinase [Signal  99.7 1.1E-17 2.4E-22  138.4   5.8  201    8-231   120-332 (458)
427 KOG1166 Mitotic checkpoint ser  99.7 2.3E-16   5E-21  149.8  12.2  149    7-159   743-901 (974)
428 PRK14879 serine/threonine prot  99.6 1.2E-15 2.5E-20  125.0   9.7   98    2-108    46-143 (211)
429 PRK09605 bifunctional UGMP fam  99.6 1.4E-15   3E-20  141.2  10.1   94    2-108   383-476 (535)
430 TIGR03724 arch_bud32 Kae1-asso  99.6 1.7E-15 3.8E-20  122.8   8.9   95    2-108    44-138 (199)
431 PRK01723 3-deoxy-D-manno-octul  99.6 4.8E-15   1E-19  123.1   9.8   99    2-109    87-192 (239)
432 smart00090 RIO RIO-like kinase  99.6 7.2E-15 1.6E-19  121.9   8.6  100    2-109    97-198 (237)
433 KOG0601 Cyclin-dependent kinas  99.5 1.4E-14 3.1E-19  129.2   7.9  204    5-230   167-379 (524)
434 cd05144 RIO2_C RIO kinase fami  99.5 3.1E-14 6.7E-19  115.3   8.0   96    2-111    80-177 (198)
435 KOG1243 Protein kinase [Genera  99.5 8.1E-14 1.8E-18  125.8  10.7  143    3-157    57-199 (690)
436 cd05120 APH_ChoK_like Aminogly  99.5 1.3E-13 2.9E-18  106.1   8.2   99    2-108    38-138 (155)
437 KOG0606 Microtubule-associated  99.3 1.3E-12 2.9E-17  123.1   5.8  192   15-225   864-1084(1205)
438 cd05119 RIO RIO kinase family,  99.3 3.8E-12 8.2E-17  102.1   7.7   98    3-111    65-166 (187)
439 cd05146 RIO3_euk RIO kinase fa  99.3   3E-11 6.4E-16   96.4   9.0   99    3-110    74-175 (197)
440 cd05151 ChoK Choline Kinase (C  99.2 2.3E-11   5E-16   95.8   7.2   95    2-108    39-136 (170)
441 COG3642 Mn2+-dependent serine/  99.2 7.2E-11 1.6E-15   91.3   8.7   94    3-108    47-140 (204)
442 TIGR01982 UbiB 2-polyprenylphe  99.2   5E-11 1.1E-15  107.6   8.0  105    1-111   199-309 (437)
443 KOG0601 Cyclin-dependent kinas  99.2 1.6E-11 3.6E-16  109.9   4.3  198    5-232   315-516 (524)
444 KOG3741 Poly(A) ribonuclease s  99.1 1.6E-09 3.4E-14   95.9  12.6  180    6-231   324-522 (655)
445 PRK15123 lipopolysaccharide co  99.1 1.1E-09 2.4E-14   92.2  11.1  104    2-108    75-194 (268)
446 KOG2137 Protein kinase [Signal  99.0 9.8E-11 2.1E-15  106.6   3.1  161   54-230    97-265 (700)
447 KOG3087 Serine/threonine prote  99.0 1.7E-09 3.8E-14   83.5   8.3  103    3-108    58-165 (229)
448 PF06293 Kdo:  Lipopolysacchari  99.0 4.3E-09 9.4E-14   85.6  10.3  104    2-109    58-171 (206)
449 COG4248 Uncharacterized protei  99.0 2.4E-08 5.3E-13   86.5  14.1  195   30-232    85-298 (637)
450 cd05154 ACAD10_11_like Acyl-Co  98.9 5.3E-09 1.1E-13   86.0   9.2  106    1-108    41-206 (223)
451 PRK04750 ubiB putative ubiquin  98.9 3.8E-09 8.2E-14   96.9   8.5  101    2-112   203-317 (537)
452 PF01163 RIO1:  RIO1 family;  I  98.9   5E-09 1.1E-13   83.3   7.3   98    2-110    55-157 (188)
453 PF12260 PIP49_C:  Protein-kina  98.7 4.7E-07   1E-11   72.3  13.8  102    3-108     7-111 (188)
454 PRK09902 hypothetical protein;  98.7 2.6E-07 5.6E-12   74.1  10.5  104    2-108    66-179 (216)
455 KOG0576 Mitogen-activated prot  98.6 7.5E-09 1.6E-13   93.8   0.4  149    3-162   281-431 (829)
456 KOG1035 eIF-2alpha kinase GCN2  98.5 6.2E-07 1.3E-11   86.8   9.5  196    3-232   230-436 (1351)
457 COG0478 RIO-like serine/threon  98.4   1E-06 2.3E-11   72.6   7.3   94    3-109   157-252 (304)
458 PF06176 WaaY:  Lipopolysacchar  98.4 2.5E-06 5.3E-11   68.9   8.9   67   29-108   117-183 (229)
459 TIGR02172 Fb_sc_TIGR02172 Fibr  98.2 1.2E-05 2.6E-10   66.3  10.4  106    2-108    39-182 (226)
460 cd05150 APH Aminoglycoside 3'-  98.2 1.2E-05 2.6E-10   67.2   9.9  107    2-108    38-193 (244)
461 COG0661 AarF Predicted unusual  98.2 5.5E-06 1.2E-10   75.8   8.2  106    1-112   207-318 (517)
462 KOG1235 Predicted unusual prot  98.1 1.2E-05 2.6E-10   73.5   7.6  104    1-111   240-357 (538)
463 PF10707 YrbL-PhoP_reg:  PhoP r  98.0 5.1E-05 1.1E-09   61.0   9.9   92    2-102    58-165 (199)
464 cd05155 APH_ChoK_like_1 Unchar  97.9 6.4E-05 1.4E-09   62.5   8.1   30   79-108   165-194 (235)
465 PLN02876 acyl-CoA dehydrogenas  97.8  0.0001 2.2E-09   72.3  10.2   41    2-42     85-131 (822)
466 COG1718 RIO1 Serine/threonine   97.8 0.00012 2.7E-09   59.9   7.8   98    3-110   116-217 (268)
467 KOG1826 Ras GTPase activating   97.7 5.1E-06 1.1E-10   82.7  -1.7  156    4-161  1278-1440(2724)
468 KOG1093 Predicted protein kina  97.6 7.5E-05 1.6E-09   67.1   4.1   45    5-50     32-77  (725)
469 PF01636 APH:  Phosphotransfera  97.4 0.00068 1.5E-08   55.9   7.8  106    2-107    37-196 (239)
470 cd05157 ETNK_euk Ethanolamine   97.4  0.0011 2.4E-08   55.0   9.0   30   79-108   171-201 (235)
471 PRK10593 hypothetical protein;  97.4  0.0015 3.2E-08   56.3  10.0   42    1-42     53-100 (297)
472 TIGR02721 ycfN_thiK thiamine k  97.4 0.00096 2.1E-08   56.2   8.5   29   79-108   147-175 (256)
473 PLN02236 choline kinase         96.7  0.0081 1.8E-07   52.9   8.5   30   79-108   201-231 (344)
474 COG3173 Predicted aminoglycosi  96.7  0.0088 1.9E-07   51.6   8.3   31   79-109   199-229 (321)
475 cd05153 HomoserineK_II Homoser  96.6   0.011 2.5E-07   50.7   8.6   31   78-108   175-205 (296)
476 PLN02421 phosphotransferase, a  96.3   0.017 3.6E-07   50.7   7.4   30   79-108   183-213 (330)
477 PF07387 Seadorna_VP7:  Seadorn  96.2    0.02 4.2E-07   46.5   6.6   86    2-106   105-190 (308)
478 COG3001 Uncharacterized protei  96.2   0.095   2E-06   42.9  10.5   43    1-43     54-99  (286)
479 COG5072 ALK1 Serine/threonine   96.1   0.032   7E-07   48.7   8.0   73   29-110   300-372 (488)
480 KOG2268 Serine/threonine prote  96.1    0.01 2.2E-07   51.0   4.7   93    3-109   158-252 (465)
481 PTZ00384 choline kinase; Provi  95.8   0.045 9.7E-07   48.9   7.9   29   79-108   228-256 (383)
482 COG2112 Predicted Ser/Thr prot  95.7   0.051 1.1E-06   42.6   6.9   91    2-108    62-155 (201)
483 cd05156 ChoK_euk Choline Kinas  95.7   0.028 6.1E-07   48.5   6.2   31   78-108   179-213 (302)
484 KOG2270 Serine/threonine prote  95.4   0.061 1.3E-06   47.2   7.1  101    3-109   214-314 (520)
485 PRK10271 thiK thiamine kinase;  95.3   0.014 3.1E-07   46.3   2.8   28   80-108    79-106 (188)
486 COG0510 ycfN Thiamine kinase a  95.3   0.038 8.2E-07   46.8   5.5   49   59-108   135-183 (269)
487 TIGR00938 thrB_alt homoserine   95.2   0.031 6.8E-07   48.4   4.9   31   78-108   187-217 (307)
488 PRK05231 homoserine kinase; Pr  95.1   0.049 1.1E-06   47.4   5.9   31   78-108   187-217 (319)
489 TIGR02906 spore_CotS spore coa  94.8   0.071 1.5E-06   46.1   5.9   30   78-108   187-216 (313)
490 PF01633 Choline_kinase:  Choli  94.6    0.02 4.4E-07   46.6   2.0   30   79-108   144-174 (211)
491 PF13095 FTA2:  Kinetochore Sim  94.6    0.17 3.7E-06   40.7   7.1   83    2-106   101-206 (207)
492 PHA03111 Ser/Thr kinase; Provi  94.5    0.06 1.3E-06   46.4   4.4   80   29-109   249-351 (444)
493 COG2334 Putative homoserine ki  93.9    0.16 3.4E-06   44.4   6.0   29   80-108   199-228 (331)
494 PF05445 Pox_ser-thr_kin:  Poxv  93.9   0.088 1.9E-06   45.6   4.3   76   31-109   247-347 (434)
495 smart00587 CHK ZnF_C4 abd HLH   93.7     0.2 4.4E-06   40.2   6.0   30   79-108   121-155 (196)
496 TIGR02904 spore_ysxE spore coa  93.2    0.14   3E-06   44.4   4.7   31   78-108   196-226 (309)
497 PF03881 Fructosamin_kin:  Fruc  92.8   0.091   2E-06   45.0   2.8   40    1-40     55-97  (288)
498 cd05152 MPH2' Macrolide 2'-Pho  92.8   0.096 2.1E-06   44.6   3.0   30   79-108   186-216 (276)
499 PRK06148 hypothetical protein;  92.1    0.33 7.1E-06   49.2   6.2   31   78-108   203-236 (1013)
500 PRK11768 serine/threonine prot  90.3    0.51 1.1E-05   41.2   5.0   29   78-108   196-224 (325)

No 1  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-50  Score=336.64  Aligned_cols=211  Identities=27%  Similarity=0.402  Sum_probs=177.3

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCe-eEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQ-RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAER   78 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~-~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~   78 (306)
                      ++.+|+++|+.++||+||++||.|..+.. ..|+||||++|||++++.+- +++++.....++.+|++||.|||+ .+  
T Consensus       123 Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~--  199 (364)
T KOG0581|consen  123 QILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERK--  199 (364)
T ss_pred             HHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccC--
Confidence            35799999999999999999999999994 99999999999999988655 579999999999999999999996 66  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ||||||||+||||+..|.|||||||.+......    ....++||..|||||.+.+..|+.++||||||+.++|+++|+
T Consensus       200 -IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~Gr  274 (364)
T KOG0581|consen  200 -IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGR  274 (364)
T ss_pred             -eeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCC
Confidence             999999999999999999999999999886543    456789999999999999999999999999999999999999


Q ss_pred             CCCCCCCC--CCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          159 RSMDKNRP--NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       159 ~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .||.....  .+...+..+...          -..|.+...   ..++++.+|+..||++||.+|||+.|+++|..
T Consensus       275 fP~~~~~~~~~~~~~Ll~~Iv~----------~ppP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpf  337 (364)
T KOG0581|consen  275 FPYPPPNPPYLDIFELLCAIVD----------EPPPRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPF  337 (364)
T ss_pred             CCCCCcCCCCCCHHHHHHHHhc----------CCCCCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHH
Confidence            99977521  111122211110          011222221   35789999999999999999999999999754


No 2  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.3e-49  Score=349.00  Aligned_cols=206  Identities=26%  Similarity=0.403  Sum_probs=178.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..+|++|.++|+|||||+++++|++.++.|||+|+|..++|..+++ +.+.+++.++..+++||+.||.|||+.+   |+
T Consensus        65 v~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~---Ii  140 (592)
T KOG0575|consen   65 VLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLG---II  140 (592)
T ss_pred             HHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ce
Confidence            4689999999999999999999999999999999999999999997 5568999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||..|+|++++..|||+|||+|+.+...+.  .....|||+.|+|||++.....+..+||||+|||+|-||+|++||
T Consensus       141 HRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPF  218 (592)
T KOG0575|consen  141 HRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPF  218 (592)
T ss_pred             ecccchhheeecCcCcEEecccceeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCc
Confidence            999999999999999999999999998764422  234579999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +.....+....+....           .       .++...+.++.+||.++|+.||.+|||+++|+.|-
T Consensus       219 etk~vkety~~Ik~~~-----------Y-------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~  270 (592)
T KOG0575|consen  219 ETKTVKETYNKIKLNE-----------Y-------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP  270 (592)
T ss_pred             ccchHHHHHHHHHhcC-----------c-------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence            8764433222221111           0       12234467899999999999999999999999864


No 3  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2.7e-50  Score=338.04  Aligned_cols=209  Identities=27%  Similarity=0.376  Sum_probs=173.7

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      ++|++||++|+|||||+++++|...+..|+||||+.||+|.+++..++ .+.+..-+.++.|++.||.|||+.|   |+|
T Consensus       224 ~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~G---I~H  299 (475)
T KOG0615|consen  224 QNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQG---IIH  299 (475)
T ss_pred             HHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcC---ccc
Confidence            699999999999999999999999999999999999999999997665 6888888999999999999999999   999


Q ss_pred             ccCCCCCeEEcCC---CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC---CCchhHHHHHHHHHHHHHh
Q 021891           83 RDFKTSNILLDAD---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        83 ~dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~ellt  156 (306)
                      |||||+|||+..+   ..+||+|||+|+.....   ......|||+.|.|||++.+..   +..++||||+||++|-+++
T Consensus       300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLs  376 (475)
T KOG0615|consen  300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLS  376 (475)
T ss_pred             ccCCcceEEeccCCcceEEEecccchhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEec
Confidence            9999999999766   67899999999986532   3456689999999999998653   3458999999999999999


Q ss_pred             CCCCCCCCCCCC-CcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          157 GRRSMDKNRPNG-EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       157 g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.+||....... ....+......          +.    .....+.+++..+||.+||..||++|||+.|+|+|.+
T Consensus       377 G~pPFS~~~~~~sl~eQI~~G~y~----------f~----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW  439 (475)
T KOG0615|consen  377 GYPPFSEEYTDPSLKEQILKGRYA----------FG----PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW  439 (475)
T ss_pred             cCCCcccccCCccHHHHHhcCccc----------cc----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence            999998654332 11221111110          11    1123456789999999999999999999999999754


No 4  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-47  Score=335.07  Aligned_cols=233  Identities=60%  Similarity=1.009  Sum_probs=203.7

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCC-eeEEEEEcCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      ||.+|+++|.+++|||+|+++|||.+.+ ..+||+||++.|+|.+++..... .++|..+.+|+.++|.||+|||+...+
T Consensus       117 eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~  196 (361)
T KOG1187|consen  117 EFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPP  196 (361)
T ss_pred             HHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCC
Confidence            5999999999999999999999999998 59999999999999999987765 899999999999999999999998877


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      +|||||||++|||+|+++..||+|||+|+......... .....||.+|+|||++..+..+.|+||||||+++.||+||+
T Consensus       197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~-~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr  275 (361)
T KOG1187|consen  197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV-STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR  275 (361)
T ss_pred             CEecCCCCHHHeeECCCCCEEccCccCcccCCccccce-eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence            89999999999999999999999999997654311111 11117999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccC-CCCCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLE-GHFSI-KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      .+.......+......|....+... .+.+++|+.+. ..+.. .....+..+..+|++.+|.+||++.|+++.|+.+.
T Consensus       276 ~~~d~~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  276 KAVDQSRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cccCCCCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            9888766666666888887777665 78899999987 55654 67788999999999999999999999999985543


No 5  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00  E-value=6e-48  Score=334.85  Aligned_cols=215  Identities=34%  Similarity=0.573  Sum_probs=179.6

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCC-eeEEEEEcCCCCCHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +|.+|+.+|.+|+|||||+++|+|.+.. .+++||||+++|+|.+++.+ ....+++..+..|+.||+.||.|||++++ 
T Consensus        85 ~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-  163 (362)
T KOG0192|consen   85 AFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-  163 (362)
T ss_pred             HHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-
Confidence            4899999999999999999999999887 79999999999999999987 46789999999999999999999999874 


Q ss_pred             CeEeccCCCCCeEEcCCC-cEEEeccCCcccCCCCCcceeeecccccccccCCcchh--cCCCCchhHHHHHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell  155 (306)
                       |||||||++|||++.++ ++||+|||+++......  .......||+.|||||++.  ...|+.|+||||||+++|||+
T Consensus       164 -iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~  240 (362)
T KOG0192|consen  164 -IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELL  240 (362)
T ss_pred             -eeecccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHH
Confidence             89999999999999998 99999999998754321  2233367999999999999  569999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      ||+.||.......   ...... .        ....+    .++..++..+..|+.+||..||..||++.+++..|+.+.
T Consensus       241 t~~~Pf~~~~~~~---~~~~v~-~--------~~~Rp----~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~  304 (362)
T KOG0192|consen  241 TGEIPFEDLAPVQ---VASAVV-V--------GGLRP----PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM  304 (362)
T ss_pred             HCCCCCCCCCHHH---HHHHHH-h--------cCCCC----CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence            9999998765411   111110 0        01111    122235678999999999999999999999999987544


No 6  
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=4e-47  Score=319.03  Aligned_cols=207  Identities=29%  Similarity=0.449  Sum_probs=172.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +..|++||+.|+|||||++++++..++.+|+|||||.||+|.++|.+++ .+++..+..++.||+.||++||+++   ||
T Consensus        56 L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~---Ii  131 (429)
T KOG0595|consen   56 LLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENN---II  131 (429)
T ss_pred             HHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            4689999999999999999999999999999999999999999997765 7999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCC------CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDAD------YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        82 H~dlkp~Nill~~~------~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      ||||||+|||++.+      -.+||+|||+|+.+..+.   .....+|++.|||||++...+|+.|+|+||+|+|+|+|+
T Consensus       132 HRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l  208 (429)
T KOG0595|consen  132 HRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL  208 (429)
T ss_pred             eccCCcceEEeccCCCCCCCceEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH
Confidence            99999999999765      458999999999986443   345689999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      +|+.||......+....++.               +.......+...+..+.+|+...|+.++.+|-++.+-..+
T Consensus       209 ~g~~Pf~a~t~~eL~~~~~k---------------~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  209 TGKPPFDAETPKELLLYIKK---------------GNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             hCCCCccccCHHHHHHHHhc---------------cccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence            99999986655433221111               1111222233334556688888888888888877776654


No 7  
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00  E-value=3.9e-48  Score=313.48  Aligned_cols=222  Identities=25%  Similarity=0.322  Sum_probs=181.1

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|+++|++|+|+|+|.++++|.....+++|+|||+. ++.+.+.+....++.+.+..++.|++.|+.|+|+++   +||
T Consensus        49 lREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IH  124 (396)
T KOG0593|consen   49 LREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIH  124 (396)
T ss_pred             HHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC---eec
Confidence            5899999999999999999999999999999999976 666667788788999999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||+||||+.+|.+||||||.|+......  ...+..+.|.||+|||.+.+ .+|+..+||||+||++.||++|.+.|
T Consensus       125 RDIKPENILit~~gvvKLCDFGFAR~L~~pg--d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~  202 (396)
T KOG0593|consen  125 RDIKPENILITQNGVVKLCDFGFARTLSAPG--DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLW  202 (396)
T ss_pred             ccCChhheEEecCCcEEeccchhhHhhcCCc--chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCC
Confidence            9999999999999999999999999876422  22345678999999999987 68999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhcc--------ccccccc--cCCccCCCCC---HHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGE--------RRRFYRL--IDPRLEGHFS---IKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      .+..+.+....+......+..        ...|..+  ..+...+...   ...+.-+.+|+++||+.||++|++.++++
T Consensus       203 PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  203 PGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             CCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            998877766555433322211        1111111  1111111111   13355889999999999999999999999


Q ss_pred             HH
Q 021891          229 EA  230 (306)
Q Consensus       229 ~~  230 (306)
                      .|
T Consensus       283 ~H  284 (396)
T KOG0593|consen  283 HH  284 (396)
T ss_pred             cC
Confidence            75


No 8  
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=6.8e-48  Score=309.21  Aligned_cols=212  Identities=26%  Similarity=0.360  Sum_probs=170.0

Q ss_pred             HHHHHHHHhcCCCCcccceee-EEEeCCe-eEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIG-YCIEDDQ-RLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~-~~~~~~~-~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +..|+.+|++|+|||||++|+ .|.+++. ++||||||.+|+|...+..   ..+.+++..+|+++.|++.||..+|+.-
T Consensus        65 ~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~  144 (375)
T KOG0591|consen   65 CVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI  144 (375)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence            467999999999999999999 4444444 8999999999999998853   4567999999999999999999999943


Q ss_pred             CC-CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           77 ER-PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        77 ~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      ++ .|+||||||.|||++.+|.+||+|||+++.+...  .......+||+.||+||.+.+.+|+.|+||||+||++|||+
T Consensus       145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMc  222 (375)
T KOG0591|consen  145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMC  222 (375)
T ss_pred             cccceeeccCcchheEEcCCCceeeccchhHhHhcch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence            22 2999999999999999999999999999986542  33345689999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .-++||.+.+-......+.       + ..     -++++   ..-.+.++..||..|+..||+.||+...++..+
T Consensus       223 aL~~PF~g~n~~~L~~KI~-------q-gd-----~~~~p---~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  223 ALQSPFYGDNLLSLCKKIE-------Q-GD-----YPPLP---DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             hcCCCcccccHHHHHHHHH-------c-CC-----CCCCc---HHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence            9999998762211111110       0 00     01111   145678999999999999999999855555443


No 9  
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.3e-46  Score=317.30  Aligned_cols=216  Identities=30%  Similarity=0.424  Sum_probs=173.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC--eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD--QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|+++|++|+|||||+++|......  .++++|||+++|+|.+++.+.+..+++..+..+.+||++||.|||+++   
T Consensus        61 l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---  137 (313)
T KOG0198|consen   61 LEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---  137 (313)
T ss_pred             HHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            689999999999999999999855544  689999999999999999877658999999999999999999999998   


Q ss_pred             eEeccCCCCCeEEcC-CCcEEEeccCCcccCCC-CCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHh
Q 021891           80 VIYRDFKTSNILLDA-DYNAKLSDFGLAKDGPE-GDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        80 iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ellt  156 (306)
                      |+||||||+|||++. ++.+||+|||++..... ...........||+.|||||++..+ ....++|||||||++.||+|
T Consensus       138 ~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T  217 (313)
T KOG0198|consen  138 IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT  217 (313)
T ss_pred             EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC
Confidence            999999999999999 79999999999987653 1111223347899999999999853 34459999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      |++||...  ...   ..+......          ......++...+.++.+|+.+|+..||++|||+.++|+|.....
T Consensus       218 g~~PW~~~--~~~---~~~~~~ig~----------~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  218 GKPPWSEF--FEE---AEALLLIGR----------EDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             CCCcchhh--cch---HHHHHHHhc----------cCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            99999764  111   111110000          00111344456789999999999999999999999999875433


No 10 
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=2.3e-46  Score=324.94  Aligned_cols=214  Identities=33%  Similarity=0.479  Sum_probs=177.4

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      .|.+|+++|++|+|+|||+++++|..++.++||||||+.|+|.++|.. .+..+...+...++.||++|++||++++   
T Consensus       247 ~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---  323 (468)
T KOG0197|consen  247 AFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---  323 (468)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---
Confidence            378999999999999999999999998899999999999999999986 4667999999999999999999999999   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      +|||||.+.||||+++..+||+|||+|+...+. .........-...|.|||.+..+.|+.|+|||||||+||||+| |+
T Consensus       324 ~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~  402 (468)
T KOG0197|consen  324 YIHRDLAARNILVDEDLVVKISDFGLARLIGDD-EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR  402 (468)
T ss_pred             ccchhhhhhheeeccCceEEEcccccccccCCC-ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC
Confidence            999999999999999999999999999954433 2222222223557999999999999999999999999999999 77


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      .|+.+....+....+          .+.+++..|       ..++..+.+++..||+.+|++|||++.+...|+.+.
T Consensus       403 ~py~~msn~ev~~~l----------e~GyRlp~P-------~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  403 VPYPGMSNEEVLELL----------ERGYRLPRP-------EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             CCCCCCCHHHHHHHH----------hccCcCCCC-------CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            777765433222211          111233333       345789999999999999999999999988876543


No 11 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-46  Score=320.60  Aligned_cols=221  Identities=25%  Similarity=0.323  Sum_probs=180.7

Q ss_pred             HHHHHHHhcCC-CCcccceeeEEEeCC-eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLV-HLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~-H~niv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .||++-|++|+ |||||++.+++.+.+ .+|+|||||+ .+|.++++.+++.|++..+..|+.||++||+|+|.+|   +
T Consensus        56 LREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---f  131 (538)
T KOG0661|consen   56 LREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---F  131 (538)
T ss_pred             HHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---c
Confidence            58999999998 999999999999988 9999999995 6999999999989999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      .|||+||+|||+..+..+||+|||+||.....   ...+..+.|.||+|||++. ...|+.++|||++|||++|+.+-++
T Consensus       132 FHRDlKPENiLi~~~~~iKiaDFGLARev~Sk---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrP  208 (538)
T KOG0661|consen  132 FHRDLKPENILISGNDVIKIADFGLAREVRSK---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRP  208 (538)
T ss_pred             ccccCChhheEecccceeEecccccccccccC---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcc
Confidence            99999999999998999999999999986432   2334567899999999987 5688999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhh-----hhcccccccccc--------CCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          160 SMDKNRPNGEHNLVEWARP-----HLGERRRFYRLI--------DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      .|.+.+..+....+-.+..     .+.+...+...+        ...+..-++ ..+.++.+||.+||.+||++|||+.|
T Consensus       209 LFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~  287 (538)
T KOG0661|consen  209 LFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQ  287 (538)
T ss_pred             cCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHH
Confidence            9999877665444322221     111111111111        111111122 26789999999999999999999999


Q ss_pred             HHHHh
Q 021891          227 VVEAL  231 (306)
Q Consensus       227 ll~~l  231 (306)
                      ++++.
T Consensus       288 al~~p  292 (538)
T KOG0661|consen  288 ALQHP  292 (538)
T ss_pred             HhcCc
Confidence            99975


No 12 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.9e-46  Score=326.64  Aligned_cols=208  Identities=26%  Similarity=0.379  Sum_probs=178.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+|+.++|+|||.+++.|...+.+|+||||++||+|.|.+...  .+++.++..+++.++.||+|||.++   |+
T Consensus       317 ilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~g---Ii  391 (550)
T KOG0578|consen  317 LLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARG---II  391 (550)
T ss_pred             hHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcc---ee
Confidence            468999999999999999999999999999999999999999988654  4899999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||.+|||++.+|.+||+|||++..+.....  .....+||+.|||||++....|+.|+||||||++++||+-|.+||
T Consensus       392 HrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPY  469 (550)
T KOG0578|consen  392 HRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPY  469 (550)
T ss_pred             eeccccceeEeccCCcEEEeeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCc
Confidence            999999999999999999999999988765443  345578999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ...++.....++.    ..           ....-..+...+..+.+|+.+||+.|+++|+++.|||+|-
T Consensus       470 lnE~PlrAlyLIa----~n-----------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp  524 (550)
T KOG0578|consen  470 LNENPLRALYLIA----TN-----------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHP  524 (550)
T ss_pred             cCCChHHHHHHHh----hc-----------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence            8754432222221    10           0011112334578999999999999999999999999974


No 13 
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00  E-value=4e-46  Score=310.04  Aligned_cols=199  Identities=30%  Similarity=0.395  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .++|..||.+++||.||+++-.|++.+++|+|+||+.||.|..+|.+.+ .+++..+..++..|+.||.|||+++   ||
T Consensus        72 ~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~g---Ii  147 (357)
T KOG0598|consen   72 TKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSKG---II  147 (357)
T ss_pred             HHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhCC---ee
Confidence            3689999999999999999999999999999999999999999996554 7999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||+|.+|+++|+|||+++.....+  .....++||+.|||||++.+..|+..+|.||||+++|||++|.+||
T Consensus       148 yRDlKPENILLd~~GHi~LtDFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF  225 (357)
T KOG0598|consen  148 YRDLKPENILLDEQGHIKLTDFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPF  225 (357)
T ss_pred             eccCCHHHeeecCCCcEEEeccccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCC
Confidence            99999999999999999999999998643322  2344589999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  223 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  223 (306)
                      ...+.......+      ...+           ....+.-.+.++++++.++|+.||++|..
T Consensus       226 ~~~~~~~~~~~I------~~~k-----------~~~~p~~ls~~ardll~~LL~rdp~~RLg  270 (357)
T KOG0598|consen  226 YAEDVKKMYDKI------LKGK-----------LPLPPGYLSEEARDLLKKLLKRDPRQRLG  270 (357)
T ss_pred             cCccHHHHHHHH------hcCc-----------CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence            876433221111      1111           01111123578899999999999999964


No 14 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00  E-value=4e-45  Score=290.99  Aligned_cols=221  Identities=24%  Similarity=0.350  Sum_probs=180.6

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|++.|+.++|+||+.++|+|.+.+.+.||+||++ .+|...++.+...++...+..++.++++||+|||++.   |+|
T Consensus        49 lREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlH  124 (318)
T KOG0659|consen   49 LREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILH  124 (318)
T ss_pred             HHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhc
Confidence            589999999999999999999999999999999996 5999999888889999999999999999999999988   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||+|+|++.+|.+||+|||+|+.+.........  .+-|.+|+|||++.| ..|+..+||||+|||+.||+-|.+.|
T Consensus       125 RDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f  202 (318)
T KOG0659|consen  125 RDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF  202 (318)
T ss_pred             ccCCccceEEcCCCcEEeecccchhccCCCCccccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC
Confidence            999999999999999999999999998765544332  256999999999986 57999999999999999999999988


Q ss_pred             CCCCCCCCcchHHhhh--h---hh------ccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWAR--P---HL------GERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~--~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .+.++-+....+-...  +   .|      .+...+.....+.. ...-...+.++.+|+.+||..||.+|+|+.|++++
T Consensus       203 pG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~-~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  203 PGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPL-NNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             CCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcc-ccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            8876655443331111  1   11      11111211111222 22334556788999999999999999999999985


No 15 
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2.2e-45  Score=315.57  Aligned_cols=222  Identities=23%  Similarity=0.280  Sum_probs=177.3

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .+||.||++|+||||+++.+...+.  ..+|+|+|||+. +|.-++...+..|++.+++.++.||+.||+|||+++   |
T Consensus       164 ~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---v  239 (560)
T KOG0600|consen  164 IREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---V  239 (560)
T ss_pred             HHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---e
Confidence            5899999999999999999998876  689999999965 999999888888999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~  159 (306)
                      +|||||.+|||||.+|.+||+|||+|+.+....... .+..+-|.||+|||++.|. .|+.++|+||+||||.||++|++
T Consensus       240 lHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkP  318 (560)
T KOG0600|consen  240 LHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKP  318 (560)
T ss_pred             eeccccccceEEcCCCCEEeccccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCC
Confidence            999999999999999999999999999876655443 3344569999999999865 79999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhh-----hhcccccc--ccccCCccC-----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          160 SMDKNRPNGEHNLVEWARP-----HLGERRRF--YRLIDPRLE-----GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      .|.+....+....+--.-.     .|. ...+  ...+.+...     .+.-...+....+|+..||..||.+|.|+.++
T Consensus       319 I~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~a  397 (560)
T KOG0600|consen  319 ILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSA  397 (560)
T ss_pred             CcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHH
Confidence            9998766554433311100     010 0000  011111110     00112235678899999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      ++.
T Consensus       398 L~s  400 (560)
T KOG0600|consen  398 LQS  400 (560)
T ss_pred             hcC
Confidence            974


No 16 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00  E-value=9.7e-45  Score=314.07  Aligned_cols=207  Identities=26%  Similarity=0.343  Sum_probs=176.2

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..|-+.|.+| .||.|+++|-.|.++..+|+|+||+++|+|.++|.+.+ .|++.....++.+|+.||+|||+.|   ||
T Consensus       121 ~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~G---II  196 (604)
T KOG0592|consen  121 TREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSNG---II  196 (604)
T ss_pred             hHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhcC---ce
Confidence            3677889999 89999999999999999999999999999999997665 7999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-----------eeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-----------HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      ||||||+|||+|.+|++||+|||.|+.+.+....           .....++||..|.+||++.....+..+|||+||||
T Consensus       197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCi  276 (604)
T KOG0592|consen  197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCI  276 (604)
T ss_pred             eccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHH
Confidence            9999999999999999999999999876553322           11144899999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          151 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       151 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      +|+|+.|.+||.+.+..-..+.+...              +-.+    +...++.+.+|+.++|..||.+|+|+++|.+|
T Consensus       277 lyQmlaG~PPFra~NeyliFqkI~~l--------------~y~f----p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  277 LYQMLAGQPPFRAANEYLIFQKIQAL--------------DYEF----PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHHHhcCCCCCccccHHHHHHHHHHh--------------cccC----CCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            99999999999877654332222211              1222    22334788999999999999999999998886


Q ss_pred             h
Q 021891          231 L  231 (306)
Q Consensus       231 l  231 (306)
                      .
T Consensus       339 p  339 (604)
T KOG0592|consen  339 P  339 (604)
T ss_pred             c
Confidence            4


No 17 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2e-44  Score=305.55  Aligned_cols=218  Identities=27%  Similarity=0.370  Sum_probs=177.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|++.|+.++||||++++..|..+..+|+||.||.+||+.+++... ...+++..+..+++++++||.|||.+|   .
T Consensus        71 l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~  147 (516)
T KOG0582|consen   71 LRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---H  147 (516)
T ss_pred             HHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---c
Confidence            689999999999999999999999999999999999999999999754 446999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCC-cceee-ecccccccccCCcchh--cCCCCchhHHHHHHHHHHHHHh
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGD-KTHVS-TRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~~~-~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+.||||+.+|.|||+|||.+..+.+.+ ..... +.+.||++|||||++.  ...|+.|+|||||||...||.+
T Consensus       148 IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~  227 (516)
T KOG0582|consen  148 IHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH  227 (516)
T ss_pred             eecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc
Confidence            999999999999999999999999886654433 22222 5578999999999965  4589999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |..||....+....-.      .+.+...  ...-.....+.....+..+.+++..||++||.+|||+++++++
T Consensus       228 G~aPf~k~pPmkvLl~------tLqn~pp--~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  228 GHAPFSKYPPMKVLLL------TLQNDPP--TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             CCCCcccCChHHHHHH------HhcCCCC--CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            9999988765433211      1111111  0000111122233445689999999999999999999999976


No 18 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.3e-44  Score=314.12  Aligned_cols=209  Identities=26%  Similarity=0.354  Sum_probs=174.6

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|+.+++.++ ||||+++++++.....+++|||||.||+|.+++.+ ..++.+..+..++.|++.|++|||+.+   |
T Consensus        66 i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g---i  141 (370)
T KOG0583|consen   66 IKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG---I  141 (370)
T ss_pred             hHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC---E
Confidence            458999999998 99999999999999999999999999999999988 568999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCC-CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC-CC-chhHHHHHHHHHHHHHhC
Q 021891           81 IYRDFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LT-SRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        81 iH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwslG~il~elltg  157 (306)
                      +||||||+|||++.+ +.+||+|||++....  .........+||+.|+|||++.+.. |+ .++||||+|+++|.|++|
T Consensus       142 ~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G  219 (370)
T KOG0583|consen  142 VHRDLKPENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCG  219 (370)
T ss_pred             eeCCCCHHHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhC
Confidence            999999999999999 999999999999863  1122345679999999999999877 86 789999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHH-HHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG-AQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ..||...........+.      ...-        .    ++... +.++.+|+.+||..||.+|+|+.+++++-+-.
T Consensus       220 ~~PF~d~~~~~l~~ki~------~~~~--------~----~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~  279 (370)
T KOG0583|consen  220 RLPFDDSNVPNLYRKIR------KGEF--------K----IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ  279 (370)
T ss_pred             CCCCCCccHHHHHHHHh------cCCc--------c----CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence            99998733221111100      0000        1    11122 57899999999999999999999999765433


No 19 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=7.9e-45  Score=320.98  Aligned_cols=206  Identities=29%  Similarity=0.409  Sum_probs=176.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .++|+-||+-|.||||+++|++++++.++|+|.||++||.|.+++.+++ ++++..+.++++||+.|+.|||..+   |+
T Consensus        59 IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~---ic  134 (786)
T KOG0588|consen   59 IEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFN---IC  134 (786)
T ss_pred             hhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhc---ce
Confidence            3689999999999999999999999999999999999999999997776 7999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCC-chhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT-SRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+|+|+|..+.+||+|||+|..-..+.   ....-||++.|.|||++.|.+|+ .++||||.|||||.|+||+.|
T Consensus       135 HRDLKpENlLLd~~~nIKIADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LP  211 (786)
T KOG0588|consen  135 HRDLKPENLLLDVKNNIKIADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLP  211 (786)
T ss_pred             eccCCchhhhhhcccCEeeeccceeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCC
Confidence            99999999999999999999999998754432   34456899999999999999985 689999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.+.+.......+.        .+.|          +++...+.++.+||.+||..||.+|.|++||++|..
T Consensus       212 FdDdNir~LLlKV~--------~G~f----------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~  265 (786)
T KOG0588|consen  212 FDDDNIRVLLLKVQ--------RGVF----------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPF  265 (786)
T ss_pred             CCCccHHHHHHHHH--------cCcc----------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence            98543322111111        1111          123345678999999999999999999999999864


No 20 
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00  E-value=1.3e-43  Score=308.17  Aligned_cols=205  Identities=27%  Similarity=0.363  Sum_probs=177.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++|++.|+|||||.++++|++..++|+|+|||.| +|..++...+ .++++.+..++.|++.||.|||+.+   |+
T Consensus        48 l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~r---il  122 (808)
T KOG0597|consen   48 LRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNR---IL  122 (808)
T ss_pred             HHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcC---cc
Confidence            67999999999999999999999999999999999976 9999996554 7999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||+||.|||++.+|.+|+||||+|+....  .+...+...||+.|||||++.+..|+..+|+||||||+|||++|++||
T Consensus       123 hrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF  200 (808)
T KOG0597|consen  123 HRDMKPQNILLEKGGTLKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPF  200 (808)
T ss_pred             cccCCcceeeecCCCceeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence            999999999999999999999999998654  455667788999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ......      ..+....         .++.   .++...+..+..|+..+|.+||..|.|+.+++.|.
T Consensus       201 ~a~si~------~Lv~~I~---------~d~v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  201 YARSIT------QLVKSIL---------KDPV---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP  252 (808)
T ss_pred             hHHHHH------HHHHHHh---------cCCC---CCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence            754221      1111111         1111   13446678999999999999999999999999874


No 21 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00  E-value=5.2e-44  Score=288.66  Aligned_cols=212  Identities=28%  Similarity=0.373  Sum_probs=176.1

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|..+|+.+.||.++++++.|.+.+.+|+||||++||.|..++++.+ ++++..+..++.||+.||+|||+.+   |++
T Consensus        92 ~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~~---iiY  167 (355)
T KOG0616|consen   92 HNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSLD---IIY  167 (355)
T ss_pred             hhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhcC---eee
Confidence            579999999999999999999999999999999999999999996554 8999999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      |||||+|||+|++|.+||+|||.|+.....     .-..|||+.|+|||++....|+.++|.||||+++|||+.|.+||.
T Consensus       168 RDLKPENiLlD~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~  242 (355)
T KOG0616|consen  168 RDLKPENLLLDQNGHIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY  242 (355)
T ss_pred             ccCChHHeeeccCCcEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence            999999999999999999999999986543     345789999999999999999999999999999999999999998


Q ss_pred             CCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhCCCCCCCCCC
Q 021891          163 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-LMSEVVEALKPLPNLKDMA  241 (306)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~ell~~l~~~~~~~~~~  241 (306)
                      ..++....+.+      .....            .++.-.+.++.+|+.++|+.|-.+|. +...=.+.++..+++....
T Consensus       243 ~~~~~~iY~KI------~~~~v------------~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  243 DDNPIQIYEKI------LEGKV------------KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             CCChHHHHHHH------HhCcc------------cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence            87663221111      11111            13444457899999999999999994 3333334444455554443


No 22 
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=9.7e-44  Score=307.52  Aligned_cols=207  Identities=27%  Similarity=0.368  Sum_probs=178.7

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCe-eEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQ-RLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~-~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .+|+.+++++.|||||.+++.|..++. ++|||+||+||+|.+.+.+.. ..++++.+..|+.|++.|+.|||++.   |
T Consensus        51 ~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---i  127 (426)
T KOG0589|consen   51 IQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---V  127 (426)
T ss_pred             HHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---h
Confidence            579999999999999999999999888 999999999999999997654 67999999999999999999999888   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|||||+.|||++.++.|||+|||+|+......  .......||+.||.||++.+.+|+.|+|||||||++|||++-+++
T Consensus       128 LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~a  205 (426)
T KOG0589|consen  128 LHRDLKCANIFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPA  205 (426)
T ss_pred             hcccchhhhhhccccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccc
Confidence            999999999999999999999999999876543  134457899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |...+-......+                 ........+...+.++..||+.||..+|..||++.+++.+.
T Consensus       206 F~a~~m~~Li~ki-----------------~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P  259 (426)
T KOG0589|consen  206 FKASNMSELILKI-----------------NRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP  259 (426)
T ss_pred             cCccchHHHHHHH-----------------hhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence            9875432211111                 11112234556678999999999999999999999999874


No 23 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00  E-value=2.3e-43  Score=289.29  Aligned_cols=222  Identities=23%  Similarity=0.276  Sum_probs=178.7

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .+||.+|.+++|||||.+-.+....  +.+|+|||||+. +|..++....++|...+++.++.|++.||+|||.+.   |
T Consensus       123 LREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---i  198 (419)
T KOG0663|consen  123 LREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---I  198 (419)
T ss_pred             HHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---e
Confidence            6899999999999999999987754  479999999965 999999988889999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~  159 (306)
                      +|||||++|+|++..|.+||+|||+|+.+....+.  .+..+-|.+|+|||++.+ ..|+.++|+||+|||+.||+++++
T Consensus       199 lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~--~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kP  276 (419)
T KOG0663|consen  199 LHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP--YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKP  276 (419)
T ss_pred             EecccchhheeeccCCcEEecccchhhhhcCCccc--CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCC
Confidence            99999999999999999999999999998765332  344567999999999986 479999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhh-----hhccc--------cccccccCCccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCHH
Q 021891          160 SMDKNRPNGEHNLVEWARP-----HLGER--------RRFYRLIDPRLEGHFSIK-GAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      .|.+....+..+.+-....     .|...        ..+.......+...|... .++..++|+..+|..||.+|.|++
T Consensus       277 lf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~  356 (419)
T KOG0663|consen  277 LFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAE  356 (419)
T ss_pred             CCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHH
Confidence            9998766555443321110     00000        111111111222233322 467889999999999999999999


Q ss_pred             HHHHH
Q 021891          226 EVVEA  230 (306)
Q Consensus       226 ell~~  230 (306)
                      |.|+|
T Consensus       357 ~~L~h  361 (419)
T KOG0663|consen  357 DGLKH  361 (419)
T ss_pred             Hhhcc
Confidence            99985


No 24 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.6e-44  Score=304.37  Aligned_cols=206  Identities=27%  Similarity=0.386  Sum_probs=178.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .++|+.+|.+++++||.++|+.+..+..++++||||.||++.+++... ..+.+..+..++++++.||.|||+++   .+
T Consensus        58 iqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~---ki  133 (467)
T KOG0201|consen   58 IQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEK---KI  133 (467)
T ss_pred             HHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcc---ee
Confidence            578999999999999999999999999999999999999999998544 35689999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||+.|||+..+|.+||+|||++........  ....++||+.|||||++.+..|+.|+||||||++.+||++|.+|+
T Consensus       134 HrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~--rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~  211 (467)
T KOG0201|consen  134 HRDIKAANILLSESGDVKLADFGVAGQLTNTVK--RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPH  211 (467)
T ss_pred             cccccccceeEeccCcEEEEecceeeeeechhh--ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCC
Confidence            999999999999999999999999988665433  236789999999999999989999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ....+.-....+             .+...|.+.+    ..+..+.+|+..||.+||+.|||+.++++|
T Consensus       212 s~~hPmrvlflI-------------pk~~PP~L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  212 SKLHPMRVLFLI-------------PKSAPPRLDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cccCcceEEEec-------------cCCCCCcccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            887664322221             1122233333    446789999999999999999999999986


No 25 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1e-43  Score=294.65  Aligned_cols=223  Identities=27%  Similarity=0.345  Sum_probs=173.9

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEe-----CCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAE   77 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~   77 (306)
                      .+|+++|+.++|+||+.+++++..     -+..|+|+|+| +.+|.+.+.. ++.++...+..++.|++.||.|+|+.+ 
T Consensus        69 lRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSAn-  145 (359)
T KOG0660|consen   69 LRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSAN-  145 (359)
T ss_pred             HHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhccc-
Confidence            489999999999999999999876     24789999999 5699888854 446999999999999999999999999 


Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHHHHh
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ellt  156 (306)
                        |+||||||+|++++.+..+||+|||+|+...........+..+.|.+|+|||++. ...|+.+.||||+|||+.||++
T Consensus       146 --ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~  223 (359)
T KOG0660|consen  146 --VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLT  223 (359)
T ss_pred             --ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHc
Confidence              9999999999999999999999999999875432222234566799999999886 5689999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhcc----------cccccccc----CCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGE----------RRRFYRLI----DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      |++.|.+.+.......+......-.+          .....+-.    ...+...++ .....+.+|+.+||..||.+|+
T Consensus       224 gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRi  302 (359)
T KOG0660|consen  224 GKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRI  302 (359)
T ss_pred             CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccC
Confidence            99999987665544433222111000          00000000    011111122 3356889999999999999999


Q ss_pred             CHHHHHHHh
Q 021891          223 LMSEVVEAL  231 (306)
Q Consensus       223 s~~ell~~l  231 (306)
                      |++|+++|.
T Consensus       303 ta~eAL~hP  311 (359)
T KOG0660|consen  303 TAEEALAHP  311 (359)
T ss_pred             CHHHHhcCh
Confidence            999999974


No 26 
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00  E-value=3.6e-42  Score=314.04  Aligned_cols=215  Identities=25%  Similarity=0.314  Sum_probs=172.0

Q ss_pred             HHHHHHHHhcCC-CCcccceee-EEEeC------CeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIG-YCIED------DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~-~~~~~------~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      .++|+++|++|+ |+|||.|+| .....      ..++|+||||.||+|-|++.++ ...|++.++++|+.|+++||.+|
T Consensus        81 v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~m  160 (738)
T KOG1989|consen   81 VKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAM  160 (738)
T ss_pred             HHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH
Confidence            479999999996 999999999 32221      2567999999999999999755 34599999999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCc-ceee------ecccccccccCCcchh---cCCCCchh
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK-THVS------TRVMGTYGYAAPEYVM---TGHLTSRS  142 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~------~~~~gt~~y~aPE~~~---~~~~~~~~  142 (306)
                      |... .+|||||||-+||||+.+|..||||||.++....... ....      -....|+.|+|||++.   +..+++|+
T Consensus       161 H~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKs  239 (738)
T KOG1989|consen  161 HYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKS  239 (738)
T ss_pred             hcCC-CccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchh
Confidence            9987 7799999999999999999999999999975332221 1000      1134699999999985   67899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          143 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       143 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      |||+|||+||.|+....||+.....                    .+++....-.-...++..+.+||..||+.||++||
T Consensus       240 DIWALGclLYkLCy~t~PFe~sg~l--------------------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RP  299 (738)
T KOG1989|consen  240 DIWALGCLLYKLCYFTTPFEESGKL--------------------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERP  299 (738)
T ss_pred             HHHHHHHHHHHHHHhCCCcCcCcce--------------------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCC
Confidence            9999999999999999999865322                    11222221111235688999999999999999999


Q ss_pred             CHHHHHHHhCCCCCC
Q 021891          223 LMSEVVEALKPLPNL  237 (306)
Q Consensus       223 s~~ell~~l~~~~~~  237 (306)
                      ++-+++.++..+...
T Consensus       300 nI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  300 NIYQVLEEIFELANK  314 (738)
T ss_pred             CHHHHHHHHHHHhcC
Confidence            999999988765543


No 27 
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00  E-value=2.6e-43  Score=306.53  Aligned_cols=207  Identities=28%  Similarity=0.454  Sum_probs=176.8

Q ss_pred             HHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR   83 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~   83 (306)
                      -+|+.|++|+|+||+.+.|+|....-+|||||||..|-|...|+.. ..+.......|..+||.|+.|||.+.   ||||
T Consensus       161 TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hK---IIHR  236 (904)
T KOG4721|consen  161 TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHK---IIHR  236 (904)
T ss_pred             hhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhh---Hhhh
Confidence            4688999999999999999999999999999999999999999554 47899999999999999999999988   9999


Q ss_pred             cCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 021891           84 DFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  163 (306)
Q Consensus        84 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  163 (306)
                      |||.-||||+.+..|||+|||-++...+.   .....++||..|||||++...+-++|+||||||||||||+||..||.+
T Consensus       237 DLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkd  313 (904)
T KOG4721|consen  237 DLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKD  313 (904)
T ss_pred             ccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccc
Confidence            99999999999999999999999875443   234568999999999999999999999999999999999999999976


Q ss_pred             CCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          164 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ......    .|.     .+..       .+.-..+..+++.+.-|++.||+..|.+|||+++++.||..
T Consensus       314 VdssAI----IwG-----VGsN-------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  314 VDSSAI----IWG-----VGSN-------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             cchhee----EEe-----ccCC-------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            543221    111     1111       11122345667889999999999999999999999999863


No 28 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00  E-value=1.2e-43  Score=283.97  Aligned_cols=209  Identities=26%  Similarity=0.402  Sum_probs=175.3

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .+|+.||+++ -||+|+++.|+++++..+++|+|.|+.|.|.|++... ..+++.....+++|+++|++|||..+   |+
T Consensus        70 ~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~---IV  145 (411)
T KOG0599|consen   70 RQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARN---IV  145 (411)
T ss_pred             HHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhh---hh
Confidence            5799999999 6999999999999999999999999999999999544 47999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc------CCCCchhHHHHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT------GHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell  155 (306)
                      ||||||+|||++++..+||+|||.++....+.+   ....|||++|.|||.+..      ..|+..+|+|++|+|+|-|+
T Consensus       146 HRDLKpENILlddn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL  222 (411)
T KOG0599|consen  146 HRDLKPENILLDDNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL  222 (411)
T ss_pred             hcccChhheeeccccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence            999999999999999999999999999877654   345799999999999864      36888999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .|.+||......-....+....         +++-.+.     ..+.+.+..+||.+||+.||.+|.|++|+|+|..
T Consensus       223 aGcpPFwHRkQmlMLR~ImeGk---------yqF~spe-----Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpf  285 (411)
T KOG0599|consen  223 AGCPPFWHRKQMLMLRMIMEGK---------YQFRSPE-----WADISATVKDLISRLLQVDPTKRITAKEALAHPF  285 (411)
T ss_pred             cCCCchhHHHHHHHHHHHHhcc---------cccCCcc-----hhhccccHHHHHHHHHeeCchhcccHHHHhcChH
Confidence            9999997543322222221111         1122222     2245678899999999999999999999999753


No 29 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00  E-value=4.4e-42  Score=301.52  Aligned_cols=214  Identities=30%  Similarity=0.470  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCC-eeEEEEEcCCCCCHHHHhhcCC-----------------------------
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRS-----------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~-----------------------------   50 (306)
                      +.+|+++|+++ +||||+++++++...+ .+++||||+++|+|.+++....                             
T Consensus        57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (338)
T cd05102          57 LMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRR  136 (338)
T ss_pred             HHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccc
Confidence            67899999999 8999999999887644 5789999999999999986431                             


Q ss_pred             --------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcE
Q 021891           51 --------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNA   98 (306)
Q Consensus        51 --------------------------------~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~   98 (306)
                                                      ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~  213 (338)
T cd05102         137 IEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVV  213 (338)
T ss_pred             cccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcE
Confidence                                            24778889999999999999999988   9999999999999999999


Q ss_pred             EEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhh
Q 021891           99 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWAR  177 (306)
Q Consensus        99 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~  177 (306)
                      ||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||........  ...   
T Consensus       214 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~---  288 (338)
T cd05102         214 KICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQ---  288 (338)
T ss_pred             EEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHH---
Confidence            9999999986543322222223345678999999998899999999999999999997 9999976432211  000   


Q ss_pred             hhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          178 PHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                       .......      ..    .+...+..+.+|+.+||+.||++|||+.+|++.|+.+
T Consensus       289 -~~~~~~~------~~----~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         289 -RLKDGTR------MR----APENATPEIYRIMLACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             -HHhcCCC------CC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             0001000      01    1112346789999999999999999999999988754


No 30 
>PHA02988 hypothetical protein; Provisional
Probab=100.00  E-value=2.7e-42  Score=295.43  Aligned_cols=209  Identities=21%  Similarity=0.351  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe----CCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC-C
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-A   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~   76 (306)
                      |.+|+++|++++||||+++++++.+    ....++||||+++|+|.+++.+. ..+++.....++.|++.||.|||+. +
T Consensus        65 ~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~  143 (283)
T PHA02988         65 TENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTN  143 (283)
T ss_pred             HHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCC
Confidence            6799999999999999999999877    34789999999999999999654 4789999999999999999999984 6


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc--CCCCchhHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el  154 (306)
                         ++||||||+||+++.++.+||+|||+++......     ....|+..|+|||++.+  ..++.++|||||||++|||
T Consensus       144 ---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el  215 (283)
T PHA02988        144 ---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEI  215 (283)
T ss_pred             ---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHH
Confidence               8899999999999999999999999988653321     23457889999999976  6899999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ++|..||.......   .....   .....      ..    ..+...+..+.+|+.+||+.||++|||+.++++.|+.+
T Consensus       216 ~~g~~Pf~~~~~~~---~~~~i---~~~~~------~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        216 FTGKIPFENLTTKE---IYDLI---INKNN------SL----KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             HHCCCCCCCCCHHH---HHHHH---HhcCC------CC----CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            99999997643221   11110   00000      01    11223467899999999999999999999999988754


Q ss_pred             C
Q 021891          235 P  235 (306)
Q Consensus       235 ~  235 (306)
                      .
T Consensus       280 ~  280 (283)
T PHA02988        280 K  280 (283)
T ss_pred             H
Confidence            3


No 31 
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=8.8e-43  Score=316.92  Aligned_cols=216  Identities=29%  Similarity=0.463  Sum_probs=183.1

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------CC----CCHHHHHHHHHHHHH
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LP----LPWSIRMKIALGAAK   67 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------~~----l~~~~~~~~~~qi~~   67 (306)
                      +|++|+++|..|+|||||+++|+|..++..++|+|||..|||.++|..+.         ..    ++..+...|+.|||.
T Consensus       535 dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAa  614 (774)
T KOG1026|consen  535 DFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAA  614 (774)
T ss_pred             HHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999996431         22    888999999999999


Q ss_pred             HHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHH
Q 021891           68 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  147 (306)
Q Consensus        68 ~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  147 (306)
                      |+.||-++.   +|||||...|+||+++..|||+|||+++.....+.......-.-..+|||||.+..++|+.++||||+
T Consensus       615 GM~YLs~~~---FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~  691 (774)
T KOG1026|consen  615 GMEYLSSHH---FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSF  691 (774)
T ss_pred             HHHHHHhCc---ccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhh
Confidence            999999988   99999999999999999999999999998655554444433344678999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          148 GVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       148 G~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ||+|||+++ |+.||.+....+....+....                 .-..+..++.++++||..||+.+|.+||+++|
T Consensus       692 GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~-----------------lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~e  754 (774)
T KOG1026|consen  692 GVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ-----------------LLSCPENCPTEVYSLMLECWNENPKRRPSFKE  754 (774)
T ss_pred             hhhhhhhhccccCcccccchHHHHHHHHcCC-----------------cccCCCCCCHHHHHHHHHHhhcCcccCCCHHH
Confidence            999999988 888988766544333322111                 12235567889999999999999999999999


Q ss_pred             HHHHhCCCCC
Q 021891          227 VVEALKPLPN  236 (306)
Q Consensus       227 ll~~l~~~~~  236 (306)
                      |-..|+....
T Consensus       755 I~~~L~~~~~  764 (774)
T KOG1026|consen  755 IHSRLQAWAQ  764 (774)
T ss_pred             HHHHHHHHHh
Confidence            9998875543


No 32 
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=1.6e-42  Score=291.07  Aligned_cols=205  Identities=22%  Similarity=0.339  Sum_probs=176.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .++|++||+.|+||||+++|.+|+..+.+.|||||..+|.|.|++.+++ .+++..+..+++||..|+.|+|.++   ++
T Consensus       100 IRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknr---Vv  175 (668)
T KOG0611|consen  100 IRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNR---VV  175 (668)
T ss_pred             HHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhcc---ce
Confidence            4799999999999999999999999999999999999999999997765 7999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCC-CchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~p  160 (306)
                      |||||.+|||+|.|+.+||+|||++-.+.+..   ..+.+||++-|.+||++.|.+| .+.+|.||||+++|-|+.|..|
T Consensus       176 HRDLKLENILLD~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMP  252 (668)
T KOG0611|consen  176 HRDLKLENILLDQNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMP  252 (668)
T ss_pred             ecccchhheeecCCCCeeeeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccc
Confidence            99999999999999999999999998775543   3456899999999999999988 5789999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.+.+.......+..        +   .+..|        ..+.++.-||++||..||++|.|+.+|..|.+
T Consensus       253 FDG~Dhk~lvrQIs~--------G---aYrEP--------~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  253 FDGRDHKRLVRQISR--------G---AYREP--------ETPSDASGLIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             cCCchHHHHHHHhhc--------c---cccCC--------CCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence            987644322111110        0   11111        12357789999999999999999999999875


No 33 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=9.1e-42  Score=311.92  Aligned_cols=209  Identities=26%  Similarity=0.360  Sum_probs=171.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +++|+++|+.++|||||++++++..++..|+||||+++|+|.+++.+.   ...+++..+..++.||+.||.|||+.+  
T Consensus       112 ~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--  189 (478)
T PTZ00267        112 ARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--  189 (478)
T ss_pred             HHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            578999999999999999999999999999999999999999987542   346899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       |+||||||+|||++.++.+||+|||+++..............+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       190 -ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~  268 (478)
T PTZ00267        190 -MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLH  268 (478)
T ss_pred             -EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence             9999999999999999999999999998765433323344567999999999999889999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||.......   ...   .....      ...     .++...+..+.+||.+||+.||++||++.+++.+
T Consensus       269 ~Pf~~~~~~~---~~~---~~~~~------~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        269 RPFKGPSQRE---IMQ---QVLYG------KYD-----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             CCCCCCCHHH---HHH---HHHhC------CCC-----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            9996543211   110   00000      000     1112234688999999999999999999999864


No 34 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-42  Score=303.92  Aligned_cols=219  Identities=26%  Similarity=0.429  Sum_probs=179.1

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .|++|+..|++-+|-||+-+.|+|..... .||+.+|+|.+|+.+|.....+|+..+.+.|++||++|+.|||.++   |
T Consensus       434 aFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---I  509 (678)
T KOG0193|consen  434 AFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---I  509 (678)
T ss_pred             HHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---h
Confidence            38999999999999999999999988776 9999999999999999887778999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc---CCCCchhHHHHHHHHHHHHHhC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~elltg  157 (306)
                      ||||||..|||+.++++|||+|||++................|...|||||++..   .+|++.+||||||||+|||++|
T Consensus       510 IHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg  589 (678)
T KOG0193|consen  510 IHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG  589 (678)
T ss_pred             hhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence            9999999999999999999999999987544433333334567888999999973   5799999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  236 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  236 (306)
                      ..||........    .|.      .++.+-..+..   .....+++++.+|+..||.+++++||.+.+|+..|+.+..
T Consensus       590 ~lPysi~~~dqI----ifm------VGrG~l~pd~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  590 ELPYSIQNRDQI----IFM------VGRGYLMPDLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             cCCcCCCChhhe----EEE------ecccccCccch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            999984332211    111      01111111111   1234567899999999999999999999999997765443


No 35 
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00  E-value=2.3e-41  Score=289.67  Aligned_cols=212  Identities=27%  Similarity=0.488  Sum_probs=173.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAA   66 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi~   66 (306)
                      |.+|++++++++||||+++++++...+..+++|||+++++|.+++....               ..+++..++.++.|++
T Consensus        55 ~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  134 (283)
T cd05048          55 FRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIA  134 (283)
T ss_pred             HHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence            6889999999999999999999999999999999999999999986532               3578899999999999


Q ss_pred             HHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHH
Q 021891           67 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  146 (306)
Q Consensus        67 ~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  146 (306)
                      .||.|||+.+   ++|+||||+||+++.++.++|+|||+++...............++..|+|||.+.+..++.++||||
T Consensus       135 ~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~s  211 (283)
T cd05048         135 AGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWS  211 (283)
T ss_pred             HHHHHHHhCC---eeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHH
Confidence            9999999988   9999999999999999999999999997654333222233345678899999998889999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          147 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       147 lG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      |||++|||++ |..||.+.....   ......    .          ......+...+..+.+|+.+||+.||++||++.
T Consensus       212 lG~il~el~~~g~~p~~~~~~~~---~~~~i~----~----------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~  274 (283)
T cd05048         212 FGVVLWEIFSYGLQPYYGFSNQE---VIEMIR----S----------RQLLPCPEDCPARVYALMIECWNEIPARRPRFK  274 (283)
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHH---HHHHHH----c----------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHH
Confidence            9999999998 999987643321   111100    0          001112234567899999999999999999999


Q ss_pred             HHHHHhCC
Q 021891          226 EVVEALKP  233 (306)
Q Consensus       226 ell~~l~~  233 (306)
                      +|+++|+.
T Consensus       275 ~i~~~l~~  282 (283)
T cd05048         275 DIHTRLRS  282 (283)
T ss_pred             HHHHHHhc
Confidence            99999864


No 36 
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.2e-42  Score=273.03  Aligned_cols=207  Identities=26%  Similarity=0.383  Sum_probs=176.9

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      ++.+|++|-+.|+||||+++|++|.+....|+++||.++|+|...|.. ....+++...+.++.|++.||.|+|..+   
T Consensus        68 qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---  144 (281)
T KOG0580|consen   68 QLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---  144 (281)
T ss_pred             hhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---
Confidence            478999999999999999999999999999999999999999999864 3457999999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      |+||||||+|+|++.+|.+||+|||.+.....    ......+||..|.+||+..+..++.++|+|++|++.||++.|.+
T Consensus       145 VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~----~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~p  220 (281)
T KOG0580|consen  145 VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLP  220 (281)
T ss_pred             cccCCCCHHHhccCCCCCeeccCCCceeecCC----CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999987542    23455789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      ||......+....+...           ++.       ++...+..+.++|.+||.++|.+|.+..|+++|..
T Consensus       221 pFes~~~~etYkrI~k~-----------~~~-------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw  275 (281)
T KOG0580|consen  221 PFESQSHSETYKRIRKV-----------DLK-------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPW  275 (281)
T ss_pred             chhhhhhHHHHHHHHHc-----------ccc-------CCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence            99876522111111100           111       22344678999999999999999999999999864


No 37 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1e-41  Score=290.94  Aligned_cols=214  Identities=27%  Similarity=0.367  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      .++|+.||++|.|||||+++++..+.  +.+|||+|||..|.+.+.  ...+. +++.++++++++++.||+|||.++  
T Consensus       155 v~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~--p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg--  230 (576)
T KOG0585|consen  155 VRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC--PPDKPELSEQQARKYLRDVVLGLEYLHYQG--  230 (576)
T ss_pred             HHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccC--CCCcccccHHHHHHHHHHHHHHHHHHHhcC--
Confidence            46899999999999999999998764  589999999999887653  22334 899999999999999999999999  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCC---CcceeeecccccccccCCcchhcC---C-CCchhHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG---DKTHVSTRVMGTYGYAAPEYVMTG---H-LTSRSDVYSFGVVL  151 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~---~-~~~~~DiwslG~il  151 (306)
                       ||||||||+|+||+.+|++||+|||.+.....+   +.........||+.|+|||...++   . -+.+.||||+|++|
T Consensus       231 -iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTL  309 (576)
T KOG0585|consen  231 -IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTL  309 (576)
T ss_pred             -eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhH
Confidence             999999999999999999999999999765322   111122336899999999998863   2 35789999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |.|+.|+.||.+....+...                .+++..+.-....+..+.+.+||++||++||+.|.+..+|..|+
T Consensus       310 YCllfG~~PF~~~~~~~l~~----------------KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  310 YCLLFGQLPFFDDFELELFD----------------KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             HHhhhccCCcccchHHHHHH----------------HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            99999999998754322211                12222222112224567899999999999999999999999998


Q ss_pred             CCCCC
Q 021891          232 KPLPN  236 (306)
Q Consensus       232 ~~~~~  236 (306)
                      +....
T Consensus       374 wvt~~  378 (576)
T KOG0585|consen  374 WVTRD  378 (576)
T ss_pred             eeccC
Confidence            75554


No 38 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00  E-value=1.6e-41  Score=296.05  Aligned_cols=206  Identities=29%  Similarity=0.353  Sum_probs=169.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++...+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+.+   |+
T Consensus        42 ~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iv  117 (323)
T cd05571          42 TLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD---VV  117 (323)
T ss_pred             HHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eE
Confidence            567999999999999999999999999999999999999999988654 47899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++......  .......||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       118 HrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf  195 (323)
T cd05571         118 YRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (323)
T ss_pred             eCCCCHHHEEECCCCCEEEeeCCCCcccccCC--CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCC
Confidence            99999999999999999999999987532211  1223457899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ........   ...   ....        +.    .++...+.++.+||.+||+.||++||     ++.++++|-
T Consensus       196 ~~~~~~~~---~~~---~~~~--------~~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~  252 (323)
T cd05571         196 YNQDHEKL---FEL---ILME--------EI----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR  252 (323)
T ss_pred             CCCCHHHH---HHH---HHcC--------CC----CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence            75432111   000   0000        01    11223357889999999999999999     799998863


No 39 
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=3.1e-41  Score=283.88  Aligned_cols=221  Identities=27%  Similarity=0.321  Sum_probs=176.5

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.|-+||+.++||-++++|+.|+.++..|+|||||+||+|..+..++ ++.+++..+..++..|+.||+|||..|   ||
T Consensus       125 ~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---iv  201 (459)
T KOG0610|consen  125 QTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IV  201 (459)
T ss_pred             HHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---ee
Confidence            56889999999999999999999999999999999999999988655 567999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCC---------------------------------CCcc-------------
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPE---------------------------------GDKT-------------  115 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~---------------------------------~~~~-------------  115 (306)
                      +|||||+||||.++|++.|+||.++..+..                                 ..+.             
T Consensus       202 YRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p  281 (459)
T KOG0610|consen  202 YRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLP  281 (459)
T ss_pred             eccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccch
Confidence            999999999999999999999998754211                                 0000             


Q ss_pred             --------eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccc
Q 021891          116 --------HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFY  187 (306)
Q Consensus       116 --------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (306)
                              .....++||-.|.|||++.|..-+.++|.|+|||++|||+.|..||.+.+.......+.      .+..   
T Consensus       282 ~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv------~~~l---  352 (459)
T KOG0610|consen  282 ELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIV------GQPL---  352 (459)
T ss_pred             hhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHh------cCCC---
Confidence                    01123679999999999999999999999999999999999999999876543322211      1111   


Q ss_pred             cccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCCCCCCCC
Q 021891          188 RLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMAS  242 (306)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~~~~  242 (306)
                           ...+  ....+..+.+||+++|.+||.+|.....=..++++.+.++.+.+
T Consensus       353 -----~Fp~--~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW  400 (459)
T KOG0610|consen  353 -----KFPE--EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW  400 (459)
T ss_pred             -----cCCC--CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence                 1111  11346789999999999999999984444445555566555543


No 40 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00  E-value=1e-40  Score=288.63  Aligned_cols=218  Identities=27%  Similarity=0.461  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------------------CCCCHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------LPLPWSIRMKIAL   63 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------~~l~~~~~~~~~~   63 (306)
                      |.+|+++|.+++||||+++++++.+.+..++||||+.+++|.+++....                  ..+++..++.++.
T Consensus        66 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  145 (304)
T cd05096          66 FLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVAL  145 (304)
T ss_pred             HHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHH
Confidence            7789999999999999999999999999999999999999999885421                  2467888999999


Q ss_pred             HHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhH
Q 021891           64 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD  143 (306)
Q Consensus        64 qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  143 (306)
                      ||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...............++..|+|||++.+..++.++|
T Consensus       146 ~i~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (304)
T cd05096         146 QIASGMKYLSSLN---FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASD  222 (304)
T ss_pred             HHHHHHHHHHHCC---ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhh
Confidence            9999999999988   9999999999999999999999999998654433322333345578899999998889999999


Q ss_pred             HHHHHHHHHHHHh--CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          144 VYSFGVVLLEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       144 iwslG~il~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ||||||++|||++  +..||.......   ..................       ..+..++..+.+|+.+||+.||++|
T Consensus       223 v~slG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~R  292 (304)
T cd05096         223 VWAFGVTLWEILMLCKEQPYGELTDEQ---VIENAGEFFRDQGRQVYL-------FRPPPCPQGLYELMLQCWSRDCRER  292 (304)
T ss_pred             hHHHHHHHHHHHHccCCCCCCcCCHHH---HHHHHHHHhhhccccccc-------cCCCCCCHHHHHHHHHHccCCchhC
Confidence            9999999999987  456666543221   111111111100000000       0111235688999999999999999


Q ss_pred             CCHHHHHHHhC
Q 021891          222 PLMSEVVEALK  232 (306)
Q Consensus       222 ps~~ell~~l~  232 (306)
                      ||+.+|.+.|+
T Consensus       293 Ps~~~i~~~l~  303 (304)
T cd05096         293 PSFSDIHAFLT  303 (304)
T ss_pred             cCHHHHHHHHh
Confidence            99999998875


No 41 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00  E-value=1.3e-41  Score=294.53  Aligned_cols=209  Identities=26%  Similarity=0.346  Sum_probs=170.0

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      +.|-.||....++.||++|-.|++.+++||||||++||++..+|.+.+ .|++..+..++.+++.|+..||..|   +||
T Consensus       189 ~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~g---yIH  264 (550)
T KOG0605|consen  189 RAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLG---YIH  264 (550)
T ss_pred             HHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcC---ccc
Confidence            568889999999999999999999999999999999999999996665 7999999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCC----------------------CCcce----e-------------------
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPE----------------------GDKTH----V-------------------  117 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~----------------------~~~~~----~-------------------  117 (306)
                      |||||+|+|||..|++||+||||+.-+..                      .+...    .                   
T Consensus       265 RDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~  344 (550)
T KOG0605|consen  265 RDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQL  344 (550)
T ss_pred             ccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhh
Confidence            99999999999999999999999853211                      00000    0                   


Q ss_pred             eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCC
Q 021891          118 STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH  197 (306)
Q Consensus       118 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (306)
                      ....+||+.|+|||++.+..|+..+|.||||||+||||.|.+||....+...-..+...+..+.-         | .   
T Consensus       345 a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f---------P-~---  411 (550)
T KOG0605|consen  345 AYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF---------P-E---  411 (550)
T ss_pred             hhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC---------C-C---
Confidence            01257999999999999999999999999999999999999999988776543333322222111         1 0   


Q ss_pred             CCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 021891          198 FSIKGAQKAAQLAAHCLSRDPKARPL---MSEVVEA  230 (306)
Q Consensus       198 ~~~~~~~~~~~li~~~l~~~p~~Rps---~~ell~~  230 (306)
                       ....+.++.+||.+||. ||++|..   ++||.+|
T Consensus       412 -~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H  445 (550)
T KOG0605|consen  412 -EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH  445 (550)
T ss_pred             -cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence             11224789999999999 9999975   6666654


No 42 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=4.6e-41  Score=294.13  Aligned_cols=221  Identities=23%  Similarity=0.361  Sum_probs=170.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~~~~i   80 (306)
                      |.+|+++|++++||||+++++++..++..++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +   |
T Consensus        50 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~---i  125 (331)
T cd06649          50 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQ---I  125 (331)
T ss_pred             HHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCC---E
Confidence            6789999999999999999999999999999999999999999986543 689999999999999999999985 4   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||++......    ......|+..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       126 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p  201 (331)
T cd06649         126 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP  201 (331)
T ss_pred             EcCCCChhhEEEcCCCcEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998765332    12345689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhcccc--------------------------------ccccccCCccCCCCCHHHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERR--------------------------------RFYRLIDPRLEGHFSIKGAQKAAQ  208 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~  208 (306)
                      |.............  ........                                .+..+.............+.++.+
T Consensus       202 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  279 (331)
T cd06649         202 IPPPDAKELEAIFG--RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQE  279 (331)
T ss_pred             CCCCCHHHHHHHhc--ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHH
Confidence            96543211100000  00000000                                000000000000011124578999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHHhC
Q 021891          209 LAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       209 li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      ||.+||+.||++|||+.+|++|..
T Consensus       280 li~~~L~~~P~~Rpt~~ell~h~~  303 (331)
T cd06649         280 FVNKCLIKNPAERADLKMLMNHTF  303 (331)
T ss_pred             HHHHHccCCcccCCCHHHHhcChH
Confidence            999999999999999999998753


No 43 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00  E-value=1.4e-41  Score=292.25  Aligned_cols=203  Identities=26%  Similarity=0.341  Sum_probs=168.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++.+.+..++||||+++++|.+++.+.+ .+++..+..++.|++.||+|||+.+   ++
T Consensus        48 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---i~  123 (291)
T cd05612          48 VHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKE---IV  123 (291)
T ss_pred             HHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            5789999999999999999999999999999999999999999986554 6899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++.....     .....|++.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       124 H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf  198 (291)
T cd05612         124 YRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPF  198 (291)
T ss_pred             ecCCCHHHeEECCCCCEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999865432     12346899999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~l  231 (306)
                      ..........      ......        .    .++...+..+.+||.+||+.||.+||+     +.++++|.
T Consensus       199 ~~~~~~~~~~------~i~~~~--------~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~  255 (291)
T cd05612         199 FDDNPFGIYE------KILAGK--------L----EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR  255 (291)
T ss_pred             CCCCHHHHHH------HHHhCC--------c----CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence            7643221110      000000        0    111222467899999999999999995     88888764


No 44 
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00  E-value=5.3e-42  Score=270.45  Aligned_cols=211  Identities=23%  Similarity=0.287  Sum_probs=174.5

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      ++++|++|-+.|+|||||++.+.+.+....|+|+|++.|++|..-|.++ ..+++..+..+++||+++|.|+|.++   |
T Consensus        56 ~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~---I  131 (355)
T KOG0033|consen   56 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG---I  131 (355)
T ss_pred             HHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC---c
Confidence            3689999999999999999999999999999999999999998877666 36789999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcC---CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           81 IYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        81 iH~dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                      ||||+||+|+++..   ..-+||+|||+|....++   ..-..+.||++|||||++...+|+..+|||+-|+|+|-|+.|
T Consensus       132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G  208 (355)
T KOG0033|consen  132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG  208 (355)
T ss_pred             eeccCChhheeeeeccCCCceeecccceEEEeCCc---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhC
Confidence            99999999999943   345899999999987632   234567899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .+||.+.......+.+....          -.++++..    ...++++.+|+++||..||.+|.|+.|.|+|.+
T Consensus       209 ~~PF~~~~~~rlye~I~~g~----------yd~~~~~w----~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW  269 (355)
T KOG0033|consen  209 YPPFWDEDQHRLYEQIKAGA----------YDYPSPEW----DTVTPEAKSLIRRMLTVNPKKRITADEALKHPW  269 (355)
T ss_pred             CCCCCCccHHHHHHHHhccc----------cCCCCccc----CcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence            99998743322111111110          11122122    234578999999999999999999999999865


No 45 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00  E-value=6.8e-41  Score=287.59  Aligned_cols=224  Identities=22%  Similarity=0.313  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++.+.+..++||||+.+ +|.+++......+++..+..++.||+.||+|||+.+   |+
T Consensus        50 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---iv  125 (288)
T cd07871          50 AIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---IL  125 (288)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            56899999999999999999999999999999999975 999988766667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++.......  ......|+..|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus       126 H~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~p  203 (288)
T cd07871         126 HRDLKPQNLLINEKGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPM  203 (288)
T ss_pred             cCCCCHHHEEECCCCCEEECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876432221  1233467899999999875 5689999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhh--------hhhccccccccccCCccCCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          161 MDKNRPNGEHNLVEWAR--------PHLGERRRFYRLIDPRLEGH----FSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |...........+....        ........+.....+.....    .....+.++.+||.+||+.||.+|||++|++
T Consensus       204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l  283 (288)
T cd07871         204 FPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL  283 (288)
T ss_pred             CCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence            97654322211111000        00000011111111111000    0112346789999999999999999999999


Q ss_pred             HHh
Q 021891          229 EAL  231 (306)
Q Consensus       229 ~~l  231 (306)
                      +|-
T Consensus       284 ~hp  286 (288)
T cd07871         284 RHS  286 (288)
T ss_pred             cCC
Confidence            863


No 46 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00  E-value=3.4e-41  Score=289.07  Aligned_cols=210  Identities=27%  Similarity=0.362  Sum_probs=170.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++|+||+++++++.+++..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+.+   |
T Consensus        47 ~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i  123 (285)
T cd05631          47 ALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---I  123 (285)
T ss_pred             HHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---E
Confidence            568999999999999999999999999999999999999999887543 346899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||++.......   ......|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       124 iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p  200 (285)
T cd05631         124 VYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP  200 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCC
Confidence            999999999999999999999999998754322   12345689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~l  231 (306)
                      |.............   .....           ....++...+..+.+|+.+||+.||.+||+     ++++++|.
T Consensus       201 f~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~  262 (285)
T cd05631         201 FRKRKERVKREEVD---RRVKE-----------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP  262 (285)
T ss_pred             CCCCCcchhHHHHH---HHhhc-----------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence            98654322111110   00000           001122234568899999999999999997     78888753


No 47 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=100.00  E-value=3.6e-41  Score=289.05  Aligned_cols=225  Identities=21%  Similarity=0.257  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++..++..++||||+++++|..+. +....+++..++.++.|++.||.|||+.+   ++
T Consensus        47 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~  122 (287)
T cd07848          47 TLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKND---IV  122 (287)
T ss_pred             HHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            578999999999999999999999999999999999887665544 44457999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||++......... ......|+..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       123 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf  201 (287)
T cd07848         123 HRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLF  201 (287)
T ss_pred             cCCCCHHHEEEcCCCcEEEeeccCcccccccccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999875432211 123356899999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhh--------hccccccccccCCcc------CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          162 DKNRPNGEHNLVEWARPH--------LGERRRFYRLIDPRL------EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      ...........+......        ......+.....+..      ...+....+..+.+||.+||+.||++|||++++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~  281 (287)
T cd07848         202 PGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC  281 (287)
T ss_pred             CCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence            765432211111100000        000000000000000      001111245679999999999999999999999


Q ss_pred             HHHh
Q 021891          228 VEAL  231 (306)
Q Consensus       228 l~~l  231 (306)
                      ++|-
T Consensus       282 l~hp  285 (287)
T cd07848         282 LNHP  285 (287)
T ss_pred             hcCC
Confidence            9863


No 48 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00  E-value=2.3e-41  Score=295.74  Aligned_cols=203  Identities=26%  Similarity=0.372  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++.+++..++||||+.+++|.+++.+. ..+++..+..++.||+.||.|||+.+   |+
T Consensus        65 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---iv  140 (329)
T PTZ00263         65 VAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKD---II  140 (329)
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            578999999999999999999999999999999999999999998654 46899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||++.++.+||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       141 H~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  215 (329)
T PTZ00263        141 YRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPF  215 (329)
T ss_pred             ecCCCHHHEEECCCCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCC
Confidence            99999999999999999999999998654321     2346899999999999989999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~l  231 (306)
                      .......   ..   .......        ..    ++...+..+.+||.+||+.||.+|++     ++++++|.
T Consensus       216 ~~~~~~~---~~---~~i~~~~--------~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp  272 (329)
T PTZ00263        216 FDDTPFR---IY---EKILAGR--------LK----FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP  272 (329)
T ss_pred             CCCCHHH---HH---HHHhcCC--------cC----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence            7543211   00   0000000        00    11123467889999999999999996     67777753


No 49 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00  E-value=3.2e-41  Score=299.51  Aligned_cols=214  Identities=25%  Similarity=0.403  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------------------------------
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------------------   50 (306)
                      +.+|+++++.+ +|+||+++++++...+..++|||||++|+|.+++....                              
T Consensus        88 ~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (374)
T cd05106          88 LMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYI  167 (374)
T ss_pred             HHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccc
Confidence            57899999999 89999999999999999999999999999999885321                              


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 021891           51 ---------------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNIL   91 (306)
Q Consensus        51 ---------------------------------------~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nil   91 (306)
                                                             ..+++..++.++.||+.||.|||+.+   |+||||||+||+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil  244 (374)
T cd05106         168 RSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVL  244 (374)
T ss_pred             cccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEE
Confidence                                                   24788899999999999999999988   999999999999


Q ss_pred             EcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCc
Q 021891           92 LDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEH  170 (306)
Q Consensus        92 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~  170 (306)
                      ++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|+|++ |..||........ 
T Consensus       245 ~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-  323 (374)
T cd05106         245 LTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-  323 (374)
T ss_pred             EeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-
Confidence            99999999999999986544322222222335667999999988899999999999999999997 9999976432211 


Q ss_pred             chHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          171 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                       .....    ...      ....    .+...+.++.+++.+||+.||++|||+.+|++.|+.+
T Consensus       324 -~~~~~----~~~------~~~~----~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         324 -FYKMV----KRG------YQMS----RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             -HHHHH----Hcc------cCcc----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence             00000    000      0000    1111246889999999999999999999999988653


No 50 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00  E-value=3e-41  Score=293.05  Aligned_cols=206  Identities=32%  Similarity=0.321  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++|++++||||+++++++.+.+..++||||+++|+|.+++.+. ..+++..+..++.||+.||.|||+.+   |+
T Consensus        40 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~  115 (312)
T cd05585          40 TLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFN---VI  115 (312)
T ss_pred             HHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eE
Confidence            567999999999999999999999999999999999999999998654 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       116 HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf  193 (312)
T cd05585         116 YRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPF  193 (312)
T ss_pred             eCCCCHHHeEECCCCcEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCc
Confidence            99999999999999999999999987543221  1233457899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL---MSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~ell~~l  231 (306)
                      .......      .........        .    .++...+..+.+||.+||+.||.+||+   +.+++.|.
T Consensus       194 ~~~~~~~------~~~~~~~~~--------~----~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp  248 (312)
T cd05585         194 YDENVNE------MYRKILQEP--------L----RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHP  248 (312)
T ss_pred             CCCCHHH------HHHHHHcCC--------C----CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCC
Confidence            7543211      111111100        0    112234568899999999999999974   67777753


No 51 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=100.00  E-value=1.6e-40  Score=279.69  Aligned_cols=211  Identities=25%  Similarity=0.391  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++...+..++||||+++++|.+++.+....+++..++.++.|++.||.|||+.+   ++
T Consensus        40 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~  116 (252)
T cd05084          40 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CI  116 (252)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            688999999999999999999999999999999999999999999766667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.+||+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       117 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p  196 (252)
T cd05084         117 HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVP  196 (252)
T ss_pred             ccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876433211111111123456999999998889999999999999999998 8888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |........   ..    ....          ......+...+..+.+|+.+||+.+|++|||+.++++.|+
T Consensus       197 ~~~~~~~~~---~~----~~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         197 YANLSNQQT---RE----AIEQ----------GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ccccCHHHH---HH----HHHc----------CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            864322110   00    0000          0001112233568899999999999999999999999875


No 52 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00  E-value=1.5e-40  Score=282.31  Aligned_cols=211  Identities=24%  Similarity=0.358  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++..++..++||||+++|+|.+++......+++..++.++.|++.||+|||+.+   ++
T Consensus        53 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---ii  129 (266)
T cd05064          53 FLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YV  129 (266)
T ss_pred             HHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            678999999999999999999999999999999999999999999776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.++++|||.+........ .......++..|+|||.+.+..++.++|||||||++||+++ |..|
T Consensus       130 H~dikp~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  208 (266)
T cd05064         130 HKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             eccccHhhEEEcCCCcEEECCCcccccccccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999998765432211 11122345678999999999999999999999999999775 9999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      |........   ....    ...      ....    .+...+..+.+++.+||+.+|.+||++++|++.|..
T Consensus       209 ~~~~~~~~~---~~~~----~~~------~~~~----~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         209 YWDMSGQDV---IKAV----EDG------FRLP----APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             cCcCCHHHH---HHHH----HCC------CCCC----CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            976533211   1110    000      0011    122345688999999999999999999999998754


No 53 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00  E-value=5.2e-41  Score=279.14  Aligned_cols=222  Identities=23%  Similarity=0.285  Sum_probs=171.5

Q ss_pred             HHHHHHHhcCCCCc-ccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHh
Q 021891            3 QAEVNFLGDLVHLN-LVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         3 ~~E~~il~~l~H~n-iv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      .+|+-+|+.|+|+| ||++++++.+.+      .+++|+||+. -+|.+++....   ..++...++.+++||+.||+||
T Consensus        58 iREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~  136 (323)
T KOG0594|consen   58 IREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL  136 (323)
T ss_pred             hHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            58999999999999 999999999877      7899999995 59999997765   4688899999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVL  151 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il  151 (306)
                      |+++   |+||||||+||+|+++|.+||+|||+|+.+.-....  ....++|.+|+|||++.+. .|+..+||||+|||+
T Consensus       137 H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIf  211 (323)
T KOG0594|consen  137 HSHG---ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIF  211 (323)
T ss_pred             HhCC---eecccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHH
Confidence            9999   999999999999999999999999999976543332  3345689999999999876 799999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhh-----hhcccc---ccccccCCcc-CCCCCHH---HHHHHHHHHHHcccCCCC
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARP-----HLGERR---RFYRLIDPRL-EGHFSIK---GAQKAAQLAAHCLSRDPK  219 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~-~~~~~~~---~~~~~~~li~~~l~~~p~  219 (306)
                      +||+++++.|.+....+....+-....     .|....   .+...+.... ...+...   ...+..+++.+||+.+|.
T Consensus       212 aEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~  291 (323)
T KOG0594|consen  212 AEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPA  291 (323)
T ss_pred             HHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcc
Confidence            999999999988766332211110000     000000   0000000000 0111111   124788999999999999


Q ss_pred             CCCCHHHHHHH
Q 021891          220 ARPLMSEVVEA  230 (306)
Q Consensus       220 ~Rps~~ell~~  230 (306)
                      +|.|++.++.|
T Consensus       292 ~R~Sa~~al~h  302 (323)
T KOG0594|consen  292 KRISAKGALTH  302 (323)
T ss_pred             cCcCHHHHhcC
Confidence            99999999986


No 54 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00  E-value=3.7e-41  Score=295.39  Aligned_cols=203  Identities=26%  Similarity=0.293  Sum_probs=168.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++.+.+..++||||+++|+|.+++.+.. .+++..+..++.|++.||.|||+.+   |+
T Consensus        78 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---iv  153 (340)
T PTZ00426         78 VFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLN---IV  153 (340)
T ss_pred             HHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            5689999999999999999999999999999999999999999986544 6899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||++.++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       154 HrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf  228 (340)
T PTZ00426        154 YRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPF  228 (340)
T ss_pred             ccCCCHHHEEECCCCCEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCC
Confidence            9999999999999999999999999865322     22357899999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ........   ..   ......        .    .++...+..+.++|.+||+.||.+|+     +++++++|.
T Consensus       229 ~~~~~~~~---~~---~i~~~~--------~----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp  285 (340)
T PTZ00426        229 YANEPLLI---YQ---KILEGI--------I----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP  285 (340)
T ss_pred             CCCCHHHH---HH---HHhcCC--------C----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence            76432110   00   000000        0    01112346788999999999999995     888888764


No 55 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3.1e-40  Score=294.28  Aligned_cols=224  Identities=20%  Similarity=0.213  Sum_probs=168.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++|++|+||||+++++++..+...++|+|++. ++|..++... ..+++..++.++.||+.||.|||+.+   |+
T Consensus       130 ~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~---Iv  204 (391)
T PHA03212        130 TATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENR---II  204 (391)
T ss_pred             hHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            5789999999999999999999999999999999995 6898888554 36899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       205 HrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~  283 (391)
T PHA03212        205 HRDIKAENIFINHPGDVCLGDFGAACFPVDINA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL  283 (391)
T ss_pred             cCCCChHhEEEcCCCCEEEEeCCcccccccccc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            999999999999999999999999975332211 1223457999999999999889999999999999999999999887


Q ss_pred             CCCCCCCCc----chHHhhhhhhcc---------ccccc-------c--ccCCccCCC--CCHHHHHHHHHHHHHcccCC
Q 021891          162 DKNRPNGEH----NLVEWARPHLGE---------RRRFY-------R--LIDPRLEGH--FSIKGAQKAAQLAAHCLSRD  217 (306)
Q Consensus       162 ~~~~~~~~~----~~~~~~~~~~~~---------~~~~~-------~--~~~~~~~~~--~~~~~~~~~~~li~~~l~~~  217 (306)
                      .........    ..+.........         ...+.       .  ...+.....  .....+.++.+||.+||+.|
T Consensus       284 ~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~d  363 (391)
T PHA03212        284 FEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFD  363 (391)
T ss_pred             CCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCC
Confidence            543221110    000000000000         00000       0  000000000  01134568999999999999


Q ss_pred             CCCCCCHHHHHHHh
Q 021891          218 PKARPLMSEVVEAL  231 (306)
Q Consensus       218 p~~Rps~~ell~~l  231 (306)
                      |.+|||++|++++-
T Consensus       364 P~~Rpta~elL~hp  377 (391)
T PHA03212        364 AHHRPSAEALLDFA  377 (391)
T ss_pred             hhhCCCHHHHhcCh
Confidence            99999999999854


No 56 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00  E-value=2.1e-40  Score=288.94  Aligned_cols=206  Identities=30%  Similarity=0.362  Sum_probs=169.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++...+..|+||||+++|+|.+++.+. ..+++..++.++.||+.||.|||+.+   |+
T Consensus        42 ~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---iv  117 (323)
T cd05595          42 TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD---VV  117 (323)
T ss_pred             HHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            467999999999999999999999999999999999999999888554 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||++.++.+||+|||++........  ......||..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       118 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf  195 (323)
T cd05595         118 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (323)
T ss_pred             ecCCCHHHEEEcCCCCEEecccHHhccccCCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCC
Confidence            999999999999999999999999875322111  123356899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ...........      .....        ..    ++...+..+.+||.+||+.||++|+     ++.++++|-
T Consensus       196 ~~~~~~~~~~~------~~~~~--------~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         196 YNQDHERLFEL------ILMEE--------IR----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             CCCCHHHHHHH------HhcCC--------CC----CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence            75432211000      00000        01    1122356889999999999999998     899998864


No 57 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00  E-value=6.5e-41  Score=297.73  Aligned_cols=213  Identities=27%  Similarity=0.441  Sum_probs=169.8

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------------------------------
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------------------   50 (306)
                      +.+|+++|+.+ +||||++++++|.+.+..++|||||++|+|.+++.+..                              
T Consensus        85 ~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (375)
T cd05104          85 LMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDS  164 (375)
T ss_pred             HHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchh
Confidence            57899999999 89999999999999999999999999999999885432                              


Q ss_pred             --------------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 021891           51 --------------------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFK   86 (306)
Q Consensus        51 --------------------------------------------~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlk   86 (306)
                                                                  ..+++..+..++.||+.||.|||+.+   ++|||||
T Consensus       165 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk  241 (375)
T cd05104         165 LNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLA  241 (375)
T ss_pred             hhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCc
Confidence                                                        24788889999999999999999988   9999999


Q ss_pred             CCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 021891           87 TSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNR  165 (306)
Q Consensus        87 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~  165 (306)
                      |+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus       242 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~  321 (375)
T cd05104         242 ARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP  321 (375)
T ss_pred             hhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999999999987544332222222345667999999999899999999999999999998 888886543


Q ss_pred             CCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          166 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ...  .......    ...   ....       +...+.++.+|+.+||+.||++|||+.+|++.|+.
T Consensus       322 ~~~--~~~~~~~----~~~---~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         322 VDS--KFYKMIK----EGY---RMLS-------PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             chH--HHHHHHH----hCc---cCCC-------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            211  1111111    000   0000       11124688999999999999999999999999874


No 58 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=100.00  E-value=5e-41  Score=294.22  Aligned_cols=211  Identities=23%  Similarity=0.268  Sum_probs=171.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++..++||||+++++++.+.+..|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.+   |+
T Consensus        48 ~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---iv  123 (333)
T cd05600          48 VLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG---YI  123 (333)
T ss_pred             HHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            568999999999999999999999999999999999999999998654 36899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||++.....     ......||..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf  198 (333)
T cd05600         124 HRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPF  198 (333)
T ss_pred             ccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCC
Confidence            999999999999999999999999986533     223457899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ...........+..       ..   ..+............+.++.+||.+||..+|.+||++.+++++.
T Consensus       199 ~~~~~~~~~~~i~~-------~~---~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~  258 (333)
T cd05600         199 SGSTPNETWENLKY-------WK---ETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP  258 (333)
T ss_pred             CCCCHHHHHHHHHh-------cc---ccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence            76543221111100       00   00000000000113357889999999999999999999999874


No 59 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00  E-value=6.5e-41  Score=292.75  Aligned_cols=206  Identities=27%  Similarity=0.338  Sum_probs=169.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++...+..++||||+++|+|.+.+... ..+++..+..++.||+.||.|||+.+   |+
T Consensus        42 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~---iv  117 (328)
T cd05593          42 TLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK---IV  117 (328)
T ss_pred             HHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eE
Confidence            568999999999999999999999999999999999999999888554 46899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       118 HrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf  195 (328)
T cd05593         118 YRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (328)
T ss_pred             ecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCC
Confidence            99999999999999999999999987532211  1123457899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ........      .......        ...    ++...+.++.+||.+||+.||++|+     ++.++++|.
T Consensus       196 ~~~~~~~~------~~~~~~~--------~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  252 (328)
T cd05593         196 YNQDHEKL------FELILME--------DIK----FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS  252 (328)
T ss_pred             CCCCHHHH------HHHhccC--------Ccc----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence            75432111      0000000        011    1222356889999999999999997     899999874


No 60 
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00  E-value=2e-40  Score=285.13  Aligned_cols=215  Identities=28%  Similarity=0.454  Sum_probs=174.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGAA   66 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi~   66 (306)
                      |++|++++++++|+||+++++++...+..++||||+++++|.+++....               ..+++..++.++.||+
T Consensus        54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~  133 (291)
T cd05094          54 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA  133 (291)
T ss_pred             HHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999986432               3478999999999999


Q ss_pred             HHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHH
Q 021891           67 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  146 (306)
Q Consensus        67 ~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  146 (306)
                      .||.|||+++   ++||||||+||+++.++.++|+|||++................++..|+|||++.+..++.++||||
T Consensus       134 ~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  210 (291)
T cd05094         134 SGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS  210 (291)
T ss_pred             HHHHHHHhCC---eeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHH
Confidence            9999999998   9999999999999999999999999997654433222233345678899999999889999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          147 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       147 lG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      |||++|||++ |..||.......   ......    .. .         ........+..+.+++.+||+.+|++|||+.
T Consensus       211 lG~il~el~t~g~~p~~~~~~~~---~~~~~~----~~-~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  273 (291)
T cd05094         211 FGVILWEIFTYGKQPWFQLSNTE---VIECIT----QG-R---------VLERPRVCPKEVYDIMLGCWQREPQQRLNIK  273 (291)
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHH---HHHHHh----CC-C---------CCCCCccCCHHHHHHHHHHcccChhhCcCHH
Confidence            9999999999 999986643321   111100    00 0         0001112356789999999999999999999


Q ss_pred             HHHHHhCCCCC
Q 021891          226 EVVEALKPLPN  236 (306)
Q Consensus       226 ell~~l~~~~~  236 (306)
                      ++++.|+.+..
T Consensus       274 ~v~~~l~~~~~  284 (291)
T cd05094         274 EIYKILHALGK  284 (291)
T ss_pred             HHHHHHHHHHh
Confidence            99999976543


No 61 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00  E-value=2.1e-40  Score=286.63  Aligned_cols=222  Identities=21%  Similarity=0.294  Sum_probs=167.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++.+++..++||||+. ++|.+++......+++..+..++.|++.||.|||+.+   |+
T Consensus        50 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---iv  125 (303)
T cd07869          50 AIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---IL  125 (303)
T ss_pred             HHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            4689999999999999999999999999999999995 6888888776667999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++.......  ......|+..|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus       126 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  203 (303)
T cd07869         126 HRDLKPQNLLISDTGELKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAA  203 (303)
T ss_pred             cCCCCHHHEEECCCCCEEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999875432211  1233567899999999875 4689999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhcc-----c---ccccccc-------CC-ccCCCCC-HHHHHHHHHHHHHcccCCCCCCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGE-----R---RRFYRLI-------DP-RLEGHFS-IKGAQKAAQLAAHCLSRDPKARPL  223 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~-------~~-~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps  223 (306)
                      |.......  ............     .   .......       .+ .....+. ...+..+.+|+.+||+.||++|||
T Consensus       204 f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s  281 (303)
T cd07869         204 FPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS  281 (303)
T ss_pred             CCCCccHH--HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC
Confidence            97643211  111110000000     0   0000000       00 0000000 011356889999999999999999


Q ss_pred             HHHHHHHh
Q 021891          224 MSEVVEAL  231 (306)
Q Consensus       224 ~~ell~~l  231 (306)
                      +.|+++|-
T Consensus       282 ~~~~l~h~  289 (303)
T cd07869         282 AQAALSHE  289 (303)
T ss_pred             HHHHhcCc
Confidence            99999853


No 62 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00  E-value=5.7e-42  Score=284.82  Aligned_cols=220  Identities=24%  Similarity=0.313  Sum_probs=170.8

Q ss_pred             HHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +|++||+.++|||||++.-+|....     ...+||||++. +|.+.+..   .+..++.-.++-+..||+.||.|||+.
T Consensus        66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~  144 (364)
T KOG0658|consen   66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH  144 (364)
T ss_pred             HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence            7999999999999999998887543     23599999975 99998863   356789999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCC-CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~e  153 (306)
                      +   |+||||||.|+|+|.+ |.+||||||.|+....+...   .....|..|+|||.+.+. .|+.+.||||.|||+.|
T Consensus       145 ~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aE  218 (364)
T KOG0658|consen  145 G---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAE  218 (364)
T ss_pred             C---cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHH
Confidence            8   9999999999999976 99999999999987655433   234458899999999864 79999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhhh-----hcc------ccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARPH-----LGE------RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      |+-|++.|.+....+....+......     +..      ...+.++....+...+....+.++.+|+.++|+.+|.+|.
T Consensus       219 Ll~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~  298 (364)
T KOG0658|consen  219 LLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRL  298 (364)
T ss_pred             HhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcC
Confidence            99999999987655443333221110     000      0001111111111124445678999999999999999999


Q ss_pred             CHHHHHHH
Q 021891          223 LMSEVVEA  230 (306)
Q Consensus       223 s~~ell~~  230 (306)
                      ++.|+++|
T Consensus       299 ~~~~~l~h  306 (364)
T KOG0658|consen  299 SALEALAH  306 (364)
T ss_pred             CHHHHhcc
Confidence            99999985


No 63 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=2.1e-40  Score=290.09  Aligned_cols=222  Identities=23%  Similarity=0.364  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE-AERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~~~~i   80 (306)
                      |.+|++++++++|+||++++++|.+++..++||||+++++|.+++.+.. .+++..+..++.|++.||.|||+. +   +
T Consensus        50 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~---i  125 (333)
T cd06650          50 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHK---I  125 (333)
T ss_pred             HHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCC---E
Confidence            6789999999999999999999999999999999999999999986543 689999999999999999999974 5   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||++......    ......|+..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       126 vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  201 (333)
T cd06650         126 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP  201 (333)
T ss_pred             EecCCChhhEEEcCCCCEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            99999999999999999999999998764322    12335689999999999988899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhh-h-------------------hcccc-------cccc-ccCCccCCCCCHHHHHHHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARP-H-------------------LGERR-------RFYR-LIDPRLEGHFSIKGAQKAAQLAAH  212 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~-~-------------------~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~li~~  212 (306)
                      |................. .                   .....       .... ..............+.++.+|+.+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  281 (333)
T cd06650         202 IPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNK  281 (333)
T ss_pred             CCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHH
Confidence            975432111000000000 0                   00000       0000 000000000001134678999999


Q ss_pred             cccCCCCCCCCHHHHHHHh
Q 021891          213 CLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       213 ~l~~~p~~Rps~~ell~~l  231 (306)
                      ||+.||++|||+.|++++.
T Consensus       282 ~L~~~P~~Rpt~~ell~h~  300 (333)
T cd06650         282 CLIKNPAERADLKQLMVHA  300 (333)
T ss_pred             hccCCcccCcCHHHHhhCH
Confidence            9999999999999999864


No 64 
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-40  Score=293.44  Aligned_cols=212  Identities=23%  Similarity=0.365  Sum_probs=177.5

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +|.-|++||..++||+||++++.|..++.++|+.|||.||-.+..+..-+..+.+.++..++.|++.||.|||+++   |
T Consensus        75 DylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---i  151 (1187)
T KOG0579|consen   75 DYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---I  151 (1187)
T ss_pred             hhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---h
Confidence            3677999999999999999999999999999999999999999999888889999999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHHHHHHHHH
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell  155 (306)
                      ||||||+.|||++.+|.++|+|||.+....  ........+.||+.|||||+..     ..+|+.++||||||+.|.||.
T Consensus       152 IHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMA  229 (1187)
T KOG0579|consen  152 IHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMA  229 (1187)
T ss_pred             hhhhccccceEEEecCcEeeecccccccch--hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHh
Confidence            999999999999999999999999986532  2233456689999999999985     458999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .+.+|....++.-....+  ...           -.|.+.  .+...+..+.+|+.+||.+||..||++.+|++|..
T Consensus       230 qiEPPHhelnpMRVllKi--aKS-----------ePPTLl--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf  291 (1187)
T KOG0579|consen  230 QIEPPHHELNPMRVLLKI--AKS-----------EPPTLL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF  291 (1187)
T ss_pred             ccCCCccccchHHHHHHH--hhc-----------CCCccc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence            999998765543221111  110           011111  23345678899999999999999999999999753


No 65 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00  E-value=9.2e-41  Score=291.29  Aligned_cols=206  Identities=29%  Similarity=0.372  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|+++|+.++||||+++++++..++..|+||||+++++|.+++.+.+ .+.+..+..++.||+.||.|||+.+   |+
T Consensus        47 ~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---iv  122 (323)
T cd05584          47 TKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQG---II  122 (323)
T ss_pred             HHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            4689999999999999999999999999999999999999999886544 6888999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++.......  ......||..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       123 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf  200 (323)
T cd05584         123 YRDLKPENILLDAQGHVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF  200 (323)
T ss_pred             cCCCCHHHeEECCCCCEEEeeCcCCeecccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCC
Confidence            999999999999999999999999875432221  223356899999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ........      ........        .    .++...+..+.+||.+||+.||++||     ++.+++++.
T Consensus       201 ~~~~~~~~------~~~~~~~~--------~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~  257 (323)
T cd05584         201 TAENRKKT------IDKILKGK--------L----NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP  257 (323)
T ss_pred             CCCCHHHH------HHHHHcCC--------C----CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence            76432111      00000000        0    11112346789999999999999999     888888864


No 66 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00  E-value=2.4e-40  Score=289.66  Aligned_cols=209  Identities=24%  Similarity=0.263  Sum_probs=178.4

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      ..+|++||++|+ |||||.++++|++....++|||+|.||.|.+.+.+.  .+++..+..++.|++.++.|||+.+   +
T Consensus        82 v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g---v  156 (382)
T KOG0032|consen   82 VRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG---V  156 (382)
T ss_pred             HHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            579999999998 999999999999999999999999999999999777  3999999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCC----CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           81 IYRDFKTSNILLDAD----YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        81 iH~dlkp~Nill~~~----~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                      +||||||+|+|+...    +.+|++|||++.....   .......+||+.|+|||++....|+..+||||+|+++|.|++
T Consensus       157 vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~  233 (382)
T KOG0032|consen  157 VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS  233 (382)
T ss_pred             eeccCCHHHeeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh
Confidence            999999999999543    5799999999998765   224556799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.+||...........+....              ...........+..+.++|.+||..||.+|+|+.++++|.+
T Consensus       234 G~~PF~~~~~~~~~~~i~~~~--------------~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  234 GVPPFWGETEFEIFLAILRGD--------------FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             CCCCCcCCChhHHHHHHHcCC--------------CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence            999998876544332221111              11222223345788999999999999999999999999854


No 67 
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.9e-41  Score=297.36  Aligned_cols=215  Identities=27%  Similarity=0.440  Sum_probs=177.7

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +|.+|++++++++|||||++||++.....+++|||+|+||+|.++|.+....++..+...++.+.+.||+|||+++   +
T Consensus       207 e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~  283 (474)
T KOG0194|consen  207 EFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---C  283 (474)
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---C
Confidence            5789999999999999999999999999999999999999999999888778999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeee-cccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST-RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      +||||.+.|+|++.++.+||+|||+++....   ..... ...-...|+|||.+....|+.++|||||||++||+++ |.
T Consensus       284 IHRDIAARNcL~~~~~~vKISDFGLs~~~~~---~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~  360 (474)
T KOG0194|consen  284 IHRDIAARNCLYSKKGVVKISDFGLSRAGSQ---YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGA  360 (474)
T ss_pred             cchhHhHHHheecCCCeEEeCccccccCCcc---eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCC
Confidence            9999999999999999999999999887431   11111 1123567999999999999999999999999999998 78


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNL  237 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  237 (306)
                      .||.+.........+.                .....-..+...+..+..++.+||..+|++|||+.++.+.++.+...
T Consensus       361 ~Py~g~~~~~v~~kI~----------------~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  361 EPYPGMKNYEVKAKIV----------------KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             CCCCCCCHHHHHHHHH----------------hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence            8998765432211110                00111112224467889999999999999999999999998765543


No 68 
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=3.7e-41  Score=296.65  Aligned_cols=207  Identities=23%  Similarity=0.347  Sum_probs=168.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCe--eEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQ--RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~--~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |..|+.+|+.|+|+||+++|+++.+..+  +.+|+|++.+|+|..|+.+.+ ..+...++.|++||++||.|||++. .+
T Consensus        88 ~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~~-PP  165 (632)
T KOG0584|consen   88 LYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQD-PP  165 (632)
T ss_pred             HHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcCC-CC
Confidence            6789999999999999999999998665  789999999999999996665 7899999999999999999999988 78


Q ss_pred             eEeccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |||||||-+||||+. .|.|||+|+|+|+.....    ......||+.|||||++. ..|++.+||||||+++.||+|+.
T Consensus       166 IIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~e  240 (632)
T KOG0584|consen  166 IIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSE  240 (632)
T ss_pred             ccccccccceEEEcCCcCceeecchhHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhcc
Confidence            999999999999976 499999999999885432    223368999999999987 78999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      -||........  ..+.+..             -..+..+..-...++.+||.+||.. ..+|+|+.|||++-
T Consensus       241 YPYsEC~n~AQ--IYKKV~S-------------GiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~  297 (632)
T KOG0584|consen  241 YPYSECTNPAQ--IYKKVTS-------------GIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDP  297 (632)
T ss_pred             CChhhhCCHHH--HHHHHHc-------------CCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence            99975533211  1111110             0001111111135788999999999 99999999999863


No 69 
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-40  Score=295.07  Aligned_cols=210  Identities=26%  Similarity=0.396  Sum_probs=176.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL--PWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l--~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +..|+.+.++|+|.|||+++|.+-+++.+-|.||-++||||.+++...-+++  .+.++..+.+||++||.|||.+.   
T Consensus       619 LhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---  695 (1226)
T KOG4279|consen  619 LHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---  695 (1226)
T ss_pred             HHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---
Confidence            5689999999999999999999999998889999999999999998887777  88899999999999999999988   


Q ss_pred             eEeccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC--CCCchhHHHHHHHHHHHHHh
Q 021891           80 VIYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        80 iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ellt  156 (306)
                      |||||||-+||||+. .|.+||+|||-++....  -+.++..+.||..|||||++..+  .|+.++|||||||.+.||.|
T Consensus       696 IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMAT  773 (1226)
T KOG4279|consen  696 IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMAT  773 (1226)
T ss_pred             eeeccccCCcEEEeeccceEEecccccchhhcc--CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeecc
Confidence            999999999999964 68999999999987653  23456678999999999999743  78999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |++||.........-.      .    ..++     .....++.+.+.++..+|.+|+..||.+||++.++++..
T Consensus       774 GrPPF~ElgspqAAMF------k----VGmy-----KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp  833 (1226)
T KOG4279|consen  774 GRPPFVELGSPQAAMF------K----VGMY-----KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP  833 (1226)
T ss_pred             CCCCeeecCChhHhhh------h----hcce-----ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence            9999975432211000      0    0111     122345677889999999999999999999999999854


No 70 
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00  E-value=4.3e-41  Score=284.49  Aligned_cols=211  Identities=35%  Similarity=0.578  Sum_probs=165.0

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +|.+|++++++++||||++++|++...+..++|||||++|+|.+++... ...+++..++.|+.||+.||.|||+.+   
T Consensus        47 ~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---  123 (259)
T PF07714_consen   47 EFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---  123 (259)
T ss_dssp             HHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             eeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence            3789999999999999999999999888899999999999999999877 567999999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      ++|++|+++||+++.++.+||+|||++................+...|+|||.+.+..++.++||||||+++|||++ |+
T Consensus       124 iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~  203 (259)
T PF07714_consen  124 IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGK  203 (259)
T ss_dssp             EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999987643333333334456778999999998889999999999999999999 67


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||......   ......    .....      ..    .+...+..+.++|..||..||++|||+.+|++.|
T Consensus       204 ~p~~~~~~~---~~~~~~----~~~~~------~~----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  204 FPFSDYDNE---EIIEKL----KQGQR------LP----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             GTTTTSCHH---HHHHHH----HTTEE------TT----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccccccc---cccccc----ccccc------ce----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            887554221   111111    11111      00    1112346789999999999999999999999875


No 71 
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00  E-value=4.5e-40  Score=281.14  Aligned_cols=211  Identities=29%  Similarity=0.482  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-------------CCCCHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-------------LPLPWSIRMKIALGAAKG   68 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-------------~~l~~~~~~~~~~qi~~~   68 (306)
                      |.+|+++|+.++|+||+++++++......++||||+++++|.+++...+             ..+++..+..++.|++.|
T Consensus        55 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~  134 (280)
T cd05049          55 FEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASG  134 (280)
T ss_pred             HHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999996542             347889999999999999


Q ss_pred             HHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHH
Q 021891           69 LAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  148 (306)
Q Consensus        69 l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  148 (306)
                      |.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||
T Consensus       135 l~~lH~~~---i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  211 (280)
T cd05049         135 MVYLASQH---FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  211 (280)
T ss_pred             HHHHhhCC---eeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHH
Confidence            99999988   999999999999999999999999999764332222222233457789999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          149 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       149 ~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      |++|||++ |..||........   .....    . ..    .     ...+...+..+.+++.+||+.||++||++.|+
T Consensus       212 ~il~e~~~~g~~p~~~~~~~~~---~~~~~----~-~~----~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  274 (280)
T cd05049         212 VVLWEIFTYGKQPWYGLSNEEV---IECIT----Q-GR----L-----LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDI  274 (280)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHH---HHHHH----c-CC----c-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence            99999998 9999875433211   11110    0 00    0     00111235688999999999999999999999


Q ss_pred             HHHhC
Q 021891          228 VEALK  232 (306)
Q Consensus       228 l~~l~  232 (306)
                      ++.|+
T Consensus       275 l~~l~  279 (280)
T cd05049         275 HERLQ  279 (280)
T ss_pred             HHHhh
Confidence            99875


No 72 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=7.2e-40  Score=286.81  Aligned_cols=211  Identities=27%  Similarity=0.353  Sum_probs=168.8

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.+ +|+||+++++++..++..++||||+++|+|.+++.++. .+++..+..++.||+.||.|||+.+   |
T Consensus        51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---i  126 (332)
T cd05614          51 TRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLG---I  126 (332)
T ss_pred             HHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            46799999999 58999999999999999999999999999999986543 6899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~  159 (306)
                      +||||||+|||++.++.+||+|||+++........ ......||..|+|||++.+. .++.++|||||||++|||++|..
T Consensus       127 vHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~  205 (332)
T cd05614         127 VYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGAS  205 (332)
T ss_pred             EecCCCHHHeEECCCCCEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCC
Confidence            99999999999999999999999999865332221 12345789999999999865 47889999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ||.............  ....        ..++..    +...+..+.+++.+||+.||++||     +++++++|.
T Consensus       206 pf~~~~~~~~~~~~~--~~~~--------~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~  268 (332)
T cd05614         206 PFTLEGERNTQSEVS--RRIL--------KCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP  268 (332)
T ss_pred             CCCCCCCCCCHHHHH--HHHh--------cCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence            997543322111110  0000        011111    122356789999999999999999     778888864


No 73 
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=1.1e-39  Score=294.68  Aligned_cols=226  Identities=22%  Similarity=0.240  Sum_probs=169.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++|++|+|+|||++++++..++..++|||++. ++|.+++......+++..++.++.||+.||.|||+.+   |+
T Consensus       207 ~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---Iv  282 (461)
T PHA03211        207 SVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---II  282 (461)
T ss_pred             HHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence            5689999999999999999999999999999999995 6899988776667999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||++.++.+||+|||+++...............||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus       283 HrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        283 HRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             ECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999998754332222233457999999999999999999999999999999999988665


Q ss_pred             CCCCCC-CCc----chHHhhhhhhcccccccc----------------ccCCccC-CCCC--HHHHHHHHHHHHHcccCC
Q 021891          162 DKNRPN-GEH----NLVEWARPHLGERRRFYR----------------LIDPRLE-GHFS--IKGAQKAAQLAAHCLSRD  217 (306)
Q Consensus       162 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~----------------~~~~~~~-~~~~--~~~~~~~~~li~~~l~~~  217 (306)
                      ...... ...    ...............+..                ...+... ..+.  ...+..+.+||.+||+.|
T Consensus       363 f~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~D  442 (461)
T PHA03211        363 FSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFD  442 (461)
T ss_pred             ccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccC
Confidence            432211 110    011111000000000000                0000000 0000  022357889999999999


Q ss_pred             CCCCCCHHHHHHHh
Q 021891          218 PKARPLMSEVVEAL  231 (306)
Q Consensus       218 p~~Rps~~ell~~l  231 (306)
                      |.+|||+.|+++|-
T Consensus       443 P~~RPsa~elL~hp  456 (461)
T PHA03211        443 GARRPSAAELLRLP  456 (461)
T ss_pred             hhhCcCHHHHhhCc
Confidence            99999999999963


No 74 
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.8e-40  Score=285.97  Aligned_cols=207  Identities=22%  Similarity=0.339  Sum_probs=181.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++.|+-++|||||++|++..+...+|||+|+-.+|+|.|+|.++...+.++.+.++++||+.|+.|+|...   +|
T Consensus        64 lfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VV  140 (864)
T KOG4717|consen   64 LFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VV  140 (864)
T ss_pred             HHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hh
Confidence            568999999999999999999999999999999999999999999999889999999999999999999999998   99


Q ss_pred             eccCCCCCeEE-cCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCC-chhHHHHHHHHHHHHHhCCC
Q 021891           82 YRDFKTSNILL-DADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT-SRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        82 H~dlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~elltg~~  159 (306)
                      ||||||+||.+ .+-|-|||+|||++-.+.++.+   .+..+|+..|-|||++.|..|+ +++||||||+|+|-|++|++
T Consensus       141 HRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~  217 (864)
T KOG4717|consen  141 HRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQP  217 (864)
T ss_pred             cccCCcceeEEeeecCceEeeeccccccCCCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCC
Confidence            99999999877 5578999999999988776654   3457899999999999999996 68999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      ||+..++.+....+.-...                  ..+.-.+.++.+||..||..||++|.|.+||..+-+
T Consensus       218 PFqeANDSETLTmImDCKY------------------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W  272 (864)
T KOG4717|consen  218 PFQEANDSETLTMIMDCKY------------------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW  272 (864)
T ss_pred             ccccccchhhhhhhhcccc------------------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence            9998776654443321111                  134456789999999999999999999999997654


No 75 
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=100.00  E-value=3.4e-40  Score=283.23  Aligned_cols=214  Identities=29%  Similarity=0.472  Sum_probs=172.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------------CCCCHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------LPLPWSIRMKIALGAAKGL   69 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------~~l~~~~~~~~~~qi~~~l   69 (306)
                      |.+|++++++++|+||+++++++...+..++||||+++++|.+++....            ..+++..++.++.|++.||
T Consensus        54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL  133 (288)
T cd05093          54 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGM  133 (288)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999986432            2489999999999999999


Q ss_pred             HHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHH
Q 021891           70 AFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV  149 (306)
Q Consensus        70 ~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  149 (306)
                      +|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||
T Consensus       134 ~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~  210 (288)
T cd05093         134 VYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV  210 (288)
T ss_pred             HHHHhCC---eeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHH
Confidence            9999988   9999999999999999999999999998654332222222334577899999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          150 VLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       150 il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      ++|+|++ |..||........   .....    .. ..     ...    +...+..+.+|+.+||+.||.+|||+.+++
T Consensus       211 il~~l~t~g~~p~~~~~~~~~---~~~i~----~~-~~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         211 VLWEIFTYGKQPWYQLSNNEV---IECIT----QG-RV-----LQR----PRTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             HHHHHHhCCCCCCCCCCHHHH---HHHHH----cC-Cc-----CCC----CCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            9999998 8888865432211   11100    00 00     001    112246789999999999999999999999


Q ss_pred             HHhCCCC
Q 021891          229 EALKPLP  235 (306)
Q Consensus       229 ~~l~~~~  235 (306)
                      +.|+.+.
T Consensus       274 ~~l~~~~  280 (288)
T cd05093         274 SLLQNLA  280 (288)
T ss_pred             HHHHHHH
Confidence            9887654


No 76 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00  E-value=4.7e-40  Score=279.11  Aligned_cols=213  Identities=26%  Similarity=0.441  Sum_probs=173.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.++++++||||+++++++...+..++||||+++++|.+++......+++..++.++.|++.||.|||+.+   ++
T Consensus        52 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~  128 (266)
T cd05033          52 FLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YV  128 (266)
T ss_pred             HHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            678999999999999999999999999999999999999999999776667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.++|+|||+++...............++..|+|||.+.+..++.++||||||+++|+|++ |..|
T Consensus       129 H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p  208 (266)
T cd05033         129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             cCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCC
Confidence            999999999999999999999999987653222222222344678999999998899999999999999999998 9888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      |.......   ......    ...   ..       ..+...+..+.+|+.+||+.+|++||++.+++++|+.+
T Consensus       209 ~~~~~~~~---~~~~~~----~~~---~~-------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         209 YWDMSNQD---VIKAVE----DGY---RL-------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCCHHH---HHHHHH----cCC---CC-------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            86543211   111110    000   00       01123356889999999999999999999999998753


No 77 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00  E-value=4.4e-41  Score=292.73  Aligned_cols=201  Identities=28%  Similarity=0.360  Sum_probs=165.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++|++++||||+++++++.+++..|+||||+++++|.+++.+. ..+++..+..++.||+.||.|||+.+   ++
T Consensus        45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~  120 (318)
T cd05582          45 TKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG---II  120 (318)
T ss_pred             HHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            467999999999999999999999999999999999999999998554 46899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||++........  ......|+..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       121 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~  198 (318)
T cd05582         121 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPF  198 (318)
T ss_pred             cCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCC
Confidence            999999999999999999999999876543211  223457899999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ........   ...   .....        .    .++...+..+.+||.+||+.||++||++.+
T Consensus       199 ~~~~~~~~---~~~---i~~~~--------~----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         199 QGKDRKET---MTM---ILKAK--------L----GMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCCHHHH---HHH---HHcCC--------C----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            75432111   100   00000        0    111223567889999999999999999544


No 78 
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00  E-value=9e-40  Score=275.82  Aligned_cols=209  Identities=27%  Similarity=0.447  Sum_probs=169.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++|+.++||||+++++++...+..++||||+++|+|.+++......+++..++.++.|++.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  122 (256)
T cd05114          46 FIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FI  122 (256)
T ss_pred             HHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            678999999999999999999999999999999999999999998765557899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|+|++ |+.|
T Consensus       123 H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p  201 (256)
T cd05114         123 HRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP  201 (256)
T ss_pred             ccccCcceEEEcCCCeEEECCCCCccccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999886533221 11122334567999999988889999999999999999999 8899


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |........   .....    ...   ....+.       ..+..+.+++.+||+.+|++|||+.++++.|
T Consensus       202 ~~~~~~~~~---~~~i~----~~~---~~~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         202 FEKKSNYEV---VEMIS----RGF---RLYRPK-------LASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCHHHH---HHHHH----CCC---CCCCCC-------CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            865432111   11110    000   011111       1245789999999999999999999999876


No 79 
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00  E-value=4.9e-40  Score=280.69  Aligned_cols=211  Identities=25%  Similarity=0.418  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      |.+|+.+++.++|+||+++++++......++||||+++++|.+++.+..         ..+++..+..++.|++.||.||
T Consensus        56 ~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  135 (277)
T cd05062          56 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYL  135 (277)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999986432         2357788999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      |+.+   ++|+||||+||+++.++.++|+|||+++...............++..|+|||++.+..++.++|||||||++|
T Consensus       136 H~~~---~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  212 (277)
T cd05062         136 NANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW  212 (277)
T ss_pred             HHCC---cccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHH
Confidence            9988   9999999999999999999999999987654332222222234577899999999888999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||++ |..||.......   ......    .. .   .  +.    .+...+..+.+++.+||+.||++|||+.|+++.|
T Consensus       213 el~~~~~~p~~~~~~~~---~~~~~~----~~-~---~--~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  275 (277)
T cd05062         213 EIATLAEQPYQGMSNEQ---VLRFVM----EG-G---L--LD----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI  275 (277)
T ss_pred             HHHcCCCCCCCCCCHHH---HHHHHH----cC-C---c--CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHh
Confidence            9999 678886543211   111100    00 0   0  00    1112346789999999999999999999999987


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      +
T Consensus       276 ~  276 (277)
T cd05062         276 K  276 (277)
T ss_pred             h
Confidence            5


No 80 
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=100.00  E-value=7.2e-40  Score=276.49  Aligned_cols=210  Identities=24%  Similarity=0.395  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++...+..++||||+.+++|.+++......+++..++.++.||+.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  122 (256)
T cd05113          46 FIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FI  122 (256)
T ss_pred             HHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            678999999999999999999999888999999999999999999766557899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.+||+|||.++....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       123 H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p  201 (256)
T cd05113         123 HRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP  201 (256)
T ss_pred             ccccCcceEEEcCCCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999876543221 11222345677999999988889999999999999999998 8999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.......   .....    .....      ...    +...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus       202 ~~~~~~~~---~~~~~----~~~~~------~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         202 YERFNNSE---TVEKV----SQGLR------LYR----PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             cCcCCHHH---HHHHH----hcCCC------CCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            86543211   11100    00000      000    1112468899999999999999999999998764


No 81 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00  E-value=5e-40  Score=281.12  Aligned_cols=210  Identities=25%  Similarity=0.362  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +..|+++++.++|+||+++++++..+...++||||+++|+|.+++..   ....+++..+..++.||+.||.|||+.+  
T Consensus        40 ~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--  117 (280)
T cd05608          40 AMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--  117 (280)
T ss_pred             HHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--
Confidence            46799999999999999999999999999999999999999987743   3346899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       |+||||||+||+++.++.+||+|||++........  ......||..|+|||++.+..++.++|||||||++|||++|+
T Consensus       118 -i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~  194 (280)
T cd05608         118 -IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAAR  194 (280)
T ss_pred             -cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence             99999999999999999999999999976543322  123356899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~  230 (306)
                      .||............  ..          ......  ..++...+..+.+++.+||+.||++||     +++++++|
T Consensus       195 ~pf~~~~~~~~~~~~--~~----------~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         195 GPFRARGEKVENKEL--KQ----------RILNDS--VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             CCCCCCCcchhHHHH--HH----------hhcccC--CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            999764332111100  00          000000  012223457889999999999999999     66777764


No 82 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00  E-value=7e-40  Score=277.61  Aligned_cols=212  Identities=23%  Similarity=0.358  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+++++.++|+||+++++++..++..++||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   +
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i  125 (263)
T cd05052          49 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F  125 (263)
T ss_pred             HHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---E
Confidence            678999999999999999999999999999999999999999998654 345899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +||||||+||+++.++.+||+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..
T Consensus       126 ~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~  204 (263)
T cd05052         126 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  204 (263)
T ss_pred             eecccCcceEEEcCCCcEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999999875432211 1112234567999999988899999999999999999998 889


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ||.......   ......          .....    ..+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus       205 p~~~~~~~~---~~~~~~----------~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         205 PYPGIDLSQ---VYELLE----------KGYRM----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCCHHH---HHHHHH----------CCCCC----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            987543211   100000          00111    11222357899999999999999999999999988653


No 83 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00  E-value=5.1e-40  Score=285.81  Aligned_cols=213  Identities=22%  Similarity=0.340  Sum_probs=171.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.+++.++||||+++++++... ..++|+||+++|+|.+++.+....+++..++.++.||+.||+|||+.+   ++
T Consensus        56 ~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ii  131 (316)
T cd05108          56 ILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LV  131 (316)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---ee
Confidence            67899999999999999999998764 578999999999999999877667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       132 H~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p  211 (316)
T cd05108         132 HRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  211 (316)
T ss_pred             ccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999987654333222223344678999999998899999999999999999997 9999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      |........   ...    ......   ..   .    +..++.++.+++.+||..+|++||++.+++..+..+.
T Consensus       212 ~~~~~~~~~---~~~----~~~~~~---~~---~----~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         212 YDGIPASEI---SSI----LEKGER---LP---Q----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             CCCCCHHHH---HHH----HhCCCC---CC---C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            865422111   000    000000   00   0    1112457889999999999999999999999886553


No 84 
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=8.8e-40  Score=292.24  Aligned_cols=225  Identities=23%  Similarity=0.264  Sum_probs=172.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++|++|+||||+++++++......++|||++. ++|.+++ .....+++..++.++.||+.||.|||+.+   |+
T Consensus       133 ~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---iv  207 (392)
T PHA03207        133 PGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRG---II  207 (392)
T ss_pred             HHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            4689999999999999999999999999999999995 6888888 44457999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+|||++.++.++|+|||+++...............||..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       208 HrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf  287 (392)
T PHA03207        208 HRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL  287 (392)
T ss_pred             ccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999998765443333333467899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccc----------------cccccccCCccC--CC-CCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          162 DKNRPNGEHNLVEWARPHLGER----------------RRFYRLIDPRLE--GH-FSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~--~~-~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      .+.........+..........                ..+.....+...  .. .....+.++.++|.+||+.||++||
T Consensus       288 ~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp  367 (392)
T PHA03207        288 FGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP  367 (392)
T ss_pred             CCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC
Confidence            7755433211111111000000                000000000000  00 0011245788999999999999999


Q ss_pred             CHHHHHHHh
Q 021891          223 LMSEVVEAL  231 (306)
Q Consensus       223 s~~ell~~l  231 (306)
                      |+.|++.+.
T Consensus       368 sa~e~l~~p  376 (392)
T PHA03207        368 SAQDILSLP  376 (392)
T ss_pred             CHHHHhhCc
Confidence            999999974


No 85 
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.3e-40  Score=288.92  Aligned_cols=211  Identities=24%  Similarity=0.341  Sum_probs=174.6

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+.+|.+| .|.+||++|||-..++.+|+||||= ..+|...|.++....+...++.+..|++.++.++|.++   |
T Consensus       406 y~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g---I  481 (677)
T KOG0596|consen  406 YRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG---I  481 (677)
T ss_pred             HHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc---e
Confidence            78999999999 5899999999999999999999986 45999999887766665689999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-----------CCCchhHHHHHHH
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-----------HLTSRSDVYSFGV  149 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwslG~  149 (306)
                      ||.||||.|+|+ -.|.+||+|||+|..+............+||..||+||.+...           ..+.++|||||||
T Consensus       482 VHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGC  560 (677)
T KOG0596|consen  482 VHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGC  560 (677)
T ss_pred             eecCCCcccEEE-EeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhh
Confidence            999999999999 5678999999999998887777777889999999999998532           2567999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHH-HHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          150 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA-QKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       150 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |||+|+.|++||.....               ...++..+.+|...-.|+.--. .++.++++.||..||++|||+.|||
T Consensus       561 ILYqMvYgktPf~~~~n---------------~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLL  625 (677)
T KOG0596|consen  561 ILYQMVYGKTPFGQIIN---------------QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELL  625 (677)
T ss_pred             HHHHHHhcCCchHHHHH---------------HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHh
Confidence            99999999999974321               1122334445543333322111 2399999999999999999999999


Q ss_pred             HHhC
Q 021891          229 EALK  232 (306)
Q Consensus       229 ~~l~  232 (306)
                      +|..
T Consensus       626 qhpF  629 (677)
T KOG0596|consen  626 QHPF  629 (677)
T ss_pred             cCcc
Confidence            9753


No 86 
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00  E-value=8.3e-40  Score=276.31  Aligned_cols=212  Identities=23%  Similarity=0.352  Sum_probs=170.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++. .+..++||||+++++|.+++..+...+++..++.++.|++.||.|||+++   ++
T Consensus        42 ~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  117 (257)
T cd05115          42 MMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FV  117 (257)
T ss_pred             HHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---ee
Confidence            678999999999999999999885 45789999999999999999766667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      ||||||+||+++.++.+||+|||++........... .....++..|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       118 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  197 (257)
T cd05115         118 HRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQK  197 (257)
T ss_pred             ecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999976543322111 111223568999999988889999999999999999996 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ||........   ....    ....          ....+...+.++.+++.+||..+|++||++.+|++.|+..
T Consensus       198 p~~~~~~~~~---~~~~----~~~~----------~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         198 PYKKMKGPEV---MSFI----EQGK----------RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CcCcCCHHHH---HHHH----HCCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            9976533211   1110    0000          0111223357889999999999999999999999988753


No 87 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=7.1e-40  Score=280.53  Aligned_cols=212  Identities=26%  Similarity=0.487  Sum_probs=170.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC----------------CCCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR----------------SLPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----------------~~~l~~~~~~~~~~qi   65 (306)
                      |++|+++++.++||||+++++++...+..++||||+++++|.+++..+                ...+++..+..++.|+
T Consensus        54 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i  133 (283)
T cd05090          54 FQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQI  133 (283)
T ss_pred             HHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999998532                1247888999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||
T Consensus       134 ~~al~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  210 (283)
T cd05090         134 AAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIW  210 (283)
T ss_pred             HHHHHHHHhcC---eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhH
Confidence            99999999988   999999999999999999999999999875443322223334456789999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||++ |..||......   .......    ...    .  ..    .+...+..+.+++.+||+.||++||++
T Consensus       211 slG~il~el~~~g~~p~~~~~~~---~~~~~~~----~~~----~--~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~  273 (283)
T cd05090         211 SFGVVLWEIFSFGLQPYYGFSNQ---EVIEMVR----KRQ----L--LP----CSEDCPPRMYSLMTECWQEGPSRRPRF  273 (283)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----cCC----c--CC----CCCCCCHHHHHHHHHHcccCcccCcCH
Confidence            99999999998 88888654321   1111110    000    0  00    111234678999999999999999999


Q ss_pred             HHHHHHhCC
Q 021891          225 SEVVEALKP  233 (306)
Q Consensus       225 ~ell~~l~~  233 (306)
                      .+|+++|..
T Consensus       274 ~~i~~~l~~  282 (283)
T cd05090         274 KDIHTRLRS  282 (283)
T ss_pred             HHHHHHhhc
Confidence            999998864


No 88 
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00  E-value=2.4e-41  Score=274.26  Aligned_cols=210  Identities=25%  Similarity=0.340  Sum_probs=180.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .-+|+.|+++++.|+||++||.+.....+|+|||||..|++.|.++.+++++.+..+..+++..++||+|||...   -+
T Consensus        75 IIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KI  151 (502)
T KOG0574|consen   75 IIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK---KI  151 (502)
T ss_pred             HHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH---HH
Confidence            457999999999999999999999999999999999999999999989999999999999999999999999987   89


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||..|||++.+|..||+|||.|..+.+..  -..+...||+.|||||++..-.|+.++||||||+...||..|++||
T Consensus       152 HRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPY  229 (502)
T KOG0574|consen  152 HRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPY  229 (502)
T ss_pred             HhhcccccEEEcccchhhhhhccccchhhhhH--HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCc
Confidence            99999999999999999999999998765432  2245578999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ....+.-..-.+               ..+|..--.-+...+.++-+++++||-++|++|-|+.++++|.
T Consensus       230 sDIHPMRAIFMI---------------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  230 SDIHPMRAIFMI---------------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT  284 (502)
T ss_pred             ccccccceeEec---------------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence            876543221111               1111111223556678999999999999999999999999874


No 89 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00  E-value=3.7e-40  Score=289.27  Aligned_cols=224  Identities=25%  Similarity=0.329  Sum_probs=164.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +.+|+++++.++||||+++++++....     ..|+|||||. ++|.+++.+. ..+++..+..++.||+.||.|||+.+
T Consensus        46 ~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~  123 (338)
T cd07859          46 ILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTAN  123 (338)
T ss_pred             HHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            578999999999999999999886532     5799999995 6899988554 36899999999999999999999998


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCc-ceeeecccccccccCCcchhc--CCCCchhHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK-THVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~e  153 (306)
                         |+||||||+|||++.++.+||+|||+++....... ........||..|+|||++.+  ..++.++|||||||++|+
T Consensus       124 ---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~e  200 (338)
T cd07859         124 ---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE  200 (338)
T ss_pred             ---eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHH
Confidence               99999999999999999999999999986432221 111234568999999999875  678999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhh--------hhhc--cccccccccCCccCCCCC---HHHHHHHHHHHHHcccCCCCC
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWAR--------PHLG--ERRRFYRLIDPRLEGHFS---IKGAQKAAQLAAHCLSRDPKA  220 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~  220 (306)
                      |++|+.||...........+....        ..+.  ....+...+.......+.   ...+..+.+++.+||+.||++
T Consensus       201 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  280 (338)
T cd07859         201 VLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKD  280 (338)
T ss_pred             HHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCccc
Confidence            999999997643221111000000        0000  000000000000000000   012457889999999999999


Q ss_pred             CCCHHHHHHH
Q 021891          221 RPLMSEVVEA  230 (306)
Q Consensus       221 Rps~~ell~~  230 (306)
                      |||+.|++++
T Consensus       281 Rpt~~e~l~h  290 (338)
T cd07859         281 RPTAEEALAD  290 (338)
T ss_pred             CCCHHHHhcC
Confidence            9999999986


No 90 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00  E-value=1.1e-40  Score=291.09  Aligned_cols=206  Identities=29%  Similarity=0.362  Sum_probs=168.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~i   80 (306)
                      +.+|+++++.++||||+++++++...+..++||||+++|+|.+++.+. ..+++..+..++.||+.||.|||+ .+   |
T Consensus        42 ~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~---i  117 (325)
T cd05594          42 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN---V  117 (325)
T ss_pred             HHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCC---E
Confidence            467899999999999999999999999999999999999999988554 468999999999999999999997 67   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+|||++.++.+||+|||+++.......  ......||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       118 vHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~P  195 (325)
T cd05594         118 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  195 (325)
T ss_pred             EecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCC
Confidence            9999999999999999999999999875332211  12335689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      |...........      ....        ...    ++...+.++.+|+.+||+.||++|+     ++.++++|.
T Consensus       196 f~~~~~~~~~~~------i~~~--------~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  253 (325)
T cd05594         196 FYNQDHEKLFEL------ILME--------EIR----FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK  253 (325)
T ss_pred             CCCCCHHHHHHH------HhcC--------CCC----CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence            975432111000      0000        001    1112346789999999999999996     899999874


No 91 
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00  E-value=8e-40  Score=279.39  Aligned_cols=217  Identities=24%  Similarity=0.332  Sum_probs=172.5

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..|++++++++||||+++++++.++...++||||+++++|.+++... ...+++..+..++.|++.||+|||+.+   ++
T Consensus        41 ~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---iv  117 (277)
T cd05607          41 LLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IV  117 (277)
T ss_pred             HHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence            46999999999999999999999999999999999999999888554 345899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.++|+|||++.......   ......|+..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       118 H~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~  194 (277)
T cd05607         118 YRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPF  194 (277)
T ss_pred             EccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999987654322   123346889999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCCCC
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLK  238 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~  238 (306)
                      .........  ..........      .+..     .....+.++.+|+.+||+.||++||++.|+++++...+.+.
T Consensus       195 ~~~~~~~~~--~~~~~~~~~~------~~~~-----~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~  258 (277)
T cd05607         195 KDHKEKVAK--EELKRRTLED------EVKF-----EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFK  258 (277)
T ss_pred             CCCcchhhH--HHHHHHhhcc------cccc-----ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhc
Confidence            754322111  1111110000      0000     00123567899999999999999999988887766555543


No 92 
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00  E-value=1.2e-39  Score=278.68  Aligned_cols=211  Identities=27%  Similarity=0.445  Sum_probs=169.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC--------------CCCCHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--------------LPLPWSIRMKIALGAAK   67 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--------------~~l~~~~~~~~~~qi~~   67 (306)
                      |.+|+++++.++|+||+++++++...+..++||||+++++|.+++....              ..+++..++.++.|++.
T Consensus        54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~  133 (280)
T cd05092          54 FQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIAS  133 (280)
T ss_pred             HHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHH
Confidence            7889999999999999999999999999999999999999999986542              24889999999999999


Q ss_pred             HHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHH
Q 021891           68 GLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF  147 (306)
Q Consensus        68 ~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  147 (306)
                      ||.|||+.+   ++||||||+||++++++.+||+|||++................++..|+|||.+.+..++.++|||||
T Consensus       134 al~~LH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  210 (280)
T cd05092         134 GMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSF  210 (280)
T ss_pred             HHHHHHHCC---eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHH
Confidence            999999988   99999999999999999999999999876543222222222345678999999998899999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          148 GVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       148 G~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ||++|+|++ |.+||............       ....      ...    .+...+..+.+|+.+||+.||.+||++.+
T Consensus       211 G~il~el~~~g~~p~~~~~~~~~~~~~-------~~~~------~~~----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~  273 (280)
T cd05092         211 GVVLWEIFTYGKQPWYQLSNTEAIECI-------TQGR------ELE----RPRTCPPEVYAIMQGCWQREPQQRMVIKD  273 (280)
T ss_pred             HHHHHHHHcCCCCCCccCCHHHHHHHH-------HcCc------cCC----CCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            999999998 88998654322111000       0000      000    11123467889999999999999999999


Q ss_pred             HHHHhC
Q 021891          227 VVEALK  232 (306)
Q Consensus       227 ll~~l~  232 (306)
                      |++.|+
T Consensus       274 l~~~l~  279 (280)
T cd05092         274 IHSRLQ  279 (280)
T ss_pred             HHHHHh
Confidence            999875


No 93 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00  E-value=5.3e-40  Score=289.95  Aligned_cols=206  Identities=25%  Similarity=0.355  Sum_probs=162.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++.++|+||+++++++...+.+++||||+.+++|.+..     ...+..+..++.||+.||.|||+.+   |+
T Consensus       119 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---iv  190 (353)
T PLN00034        119 ICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRH---IV  190 (353)
T ss_pred             HHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            678999999999999999999999999999999999999986532     3567888899999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-----CCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+|||++.++.+||+|||+++.......  ......||..|+|||++..     ...+.++|||||||++|||++
T Consensus       191 HrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~  268 (353)
T PLN00034        191 HRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL  268 (353)
T ss_pred             ecCCCHHHEEEcCCCCEEEcccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHh
Confidence            999999999999999999999999986543211  1233568999999998743     234568999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |+.||................  ..        ..    .......+.++.+||.+||+.||++|||+.|+++|-
T Consensus       269 g~~pf~~~~~~~~~~~~~~~~--~~--------~~----~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp  329 (353)
T PLN00034        269 GRFPFGVGRQGDWASLMCAIC--MS--------QP----PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHP  329 (353)
T ss_pred             CCCCCCCCCCccHHHHHHHHh--cc--------CC----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            999997432221111110000  00        00    111223457899999999999999999999999864


No 94 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00  E-value=5.4e-40  Score=286.47  Aligned_cols=196  Identities=30%  Similarity=0.364  Sum_probs=159.2

Q ss_pred             HHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 021891            8 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKT   87 (306)
Q Consensus         8 il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp   87 (306)
                      +++.++||||+++++++...+..++||||+++|+|.+++.+. ..+++..+..++.||+.||.|||+.+   |+||||||
T Consensus        49 ~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp  124 (323)
T cd05575          49 LLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKP  124 (323)
T ss_pred             HHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCH
Confidence            567899999999999999999999999999999999988654 47899999999999999999999998   99999999


Q ss_pred             CCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCC
Q 021891           88 SNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  167 (306)
Q Consensus        88 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  167 (306)
                      +|||++.++.+||+|||++.......  .......||..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       125 ~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~  202 (323)
T cd05575         125 ENILLDSQGHVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA  202 (323)
T ss_pred             HHeEECCCCcEEEeccCCCcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH
Confidence            99999999999999999987532221  1233457899999999999989999999999999999999999999764321


Q ss_pred             CCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          168 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      .   .   ........        ...    ....+..+.++|.+||+.||.+||++.+.
T Consensus       203 ~---~---~~~i~~~~--------~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (323)
T cd05575         203 E---M---YDNILNKP--------LRL----KPNISVSARHLLEGLLQKDRTKRLGAKDD  244 (323)
T ss_pred             H---H---HHHHHcCC--------CCC----CCCCCHHHHHHHHHHhhcCHHhCCCCCCC
Confidence            1   1   00000000        011    11225688999999999999999998533


No 95 
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00  E-value=1.4e-39  Score=277.85  Aligned_cols=211  Identities=27%  Similarity=0.401  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------LPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      |.+|+.+++.++|+||+++++++.+.+..++||||+++++|.+++.+..      ..+++..+..++.||+.||.|||+.
T Consensus        56 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  135 (277)
T cd05036          56 FLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN  135 (277)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            6789999999999999999999999999999999999999999986543      2589999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCC---cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      +   ++||||||+||+++.++   .+||+|||+++...............++..|+|||++.+..++.++|||||||++|
T Consensus       136 ~---ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~  212 (277)
T cd05036         136 H---FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLW  212 (277)
T ss_pred             C---EeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHH
Confidence            8   99999999999998754   58999999998753322111111223356799999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||++ |..||........   ....    ....          ....+...+..+.+++.+||+.+|++|||+.+|+++|
T Consensus       213 el~~~g~~pf~~~~~~~~---~~~~----~~~~----------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l  275 (277)
T cd05036         213 EIFSLGYMPYPGRTNQEV---MEFV----TGGG----------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI  275 (277)
T ss_pred             HHHcCCCCCCCCCCHHHH---HHHH----HcCC----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence            9997 8899875433211   1110    0000          0011222356889999999999999999999999988


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      .
T Consensus       276 ~  276 (277)
T cd05036         276 Q  276 (277)
T ss_pred             h
Confidence            5


No 96 
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3e-40  Score=310.40  Aligned_cols=216  Identities=30%  Similarity=0.429  Sum_probs=179.5

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC------CCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR------SLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~------~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      +|.+|..+|+.++|||||+++|++.+....+|++|||.||+|..+|++.      ...+.......++.|||+|+.||++
T Consensus       741 ~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~  820 (1025)
T KOG1095|consen  741 DFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES  820 (1025)
T ss_pred             HHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh
Confidence            5899999999999999999999999999999999999999999999876      5678999999999999999999999


Q ss_pred             CCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHH
Q 021891           75 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  154 (306)
                      ++   +|||||...|+|++....+||+|||+|+.+...+.........-...|||||.+..+.|+.|+|||||||++||+
T Consensus       821 ~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEi  897 (1025)
T KOG1095|consen  821 KH---FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEI  897 (1025)
T ss_pred             CC---CcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHH
Confidence            98   999999999999999999999999999965544433333222334679999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          155 LT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       155 lt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      +| |..||...+..+....       .....   ++-       .+..++..++++|..||+.+|++||++..|++.+..
T Consensus       898 fslG~~PY~~~~n~~v~~~-------~~~gg---RL~-------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  898 FSLGATPYPSRSNFEVLLD-------VLEGG---RLD-------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             HhCCCCCCCCcchHHHHHH-------HHhCC---ccC-------CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence            99 7789877654322110       11111   111       233557899999999999999999999999997665


Q ss_pred             CCC
Q 021891          234 LPN  236 (306)
Q Consensus       234 ~~~  236 (306)
                      +.+
T Consensus       961 i~~  963 (1025)
T KOG1095|consen  961 ISN  963 (1025)
T ss_pred             hhh
Confidence            443


No 97 
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=1.3e-39  Score=278.96  Aligned_cols=212  Identities=24%  Similarity=0.374  Sum_probs=170.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC---------------CCCCCHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGAA   66 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---------------~~~l~~~~~~~~~~qi~   66 (306)
                      |.+|+.+++.++||||+++++++.+.+..++++||+.+++|.+++...               ...+++..+..++.|++
T Consensus        55 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~  134 (283)
T cd05091          55 FKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIA  134 (283)
T ss_pred             HHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999998532               23478889999999999


Q ss_pred             HHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHH
Q 021891           67 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  146 (306)
Q Consensus        67 ~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  146 (306)
                      .||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||
T Consensus       135 ~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  211 (283)
T cd05091         135 AGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWS  211 (283)
T ss_pred             HHHHHHHHcC---ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHH
Confidence            9999999988   9999999999999999999999999988654433222223344577899999998888999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          147 FGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       147 lG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      |||++|||++ |..||.......   ......    ...          ....+...+..+.+|+..||+.+|++||++.
T Consensus       212 lG~~l~el~~~g~~p~~~~~~~~---~~~~i~----~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~  274 (283)
T cd05091         212 YGVVLWEVFSYGLQPYCGYSNQD---VIEMIR----NRQ----------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFK  274 (283)
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHH---HHHHHH----cCC----------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence            9999999998 778886543211   111100    000          0011223457789999999999999999999


Q ss_pred             HHHHHhCC
Q 021891          226 EVVEALKP  233 (306)
Q Consensus       226 ell~~l~~  233 (306)
                      +|++.|+.
T Consensus       275 ~i~~~l~~  282 (283)
T cd05091         275 DIHSRLRT  282 (283)
T ss_pred             HHHHHhhC
Confidence            99998864


No 98 
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00  E-value=1.5e-39  Score=278.02  Aligned_cols=213  Identities=26%  Similarity=0.401  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +..|+.++++++||||+++++++. ....++|+||+++|+|.+++......+++..+..++.||+.||.|||+.+   ++
T Consensus        56 ~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ii  131 (279)
T cd05111          56 ITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MV  131 (279)
T ss_pred             HHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            566778899999999999999875 45678999999999999999776667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus       132 H~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p  211 (279)
T cd05111         132 HRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEP  211 (279)
T ss_pred             ccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999987544333222333456778999999988899999999999999999998 9999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      |........   ....    ....   ....+.       .++..+.+++.+||..||++|||+.|+++.|..+.
T Consensus       212 ~~~~~~~~~---~~~~----~~~~---~~~~~~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         212 YAGMRPHEV---PDLL----EKGE---RLAQPQ-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CCCCCHHHH---HHHH----HCCC---cCCCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            876432211   1110    0100   001111       12357789999999999999999999999886543


No 99 
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00  E-value=1.8e-39  Score=274.26  Aligned_cols=211  Identities=31%  Similarity=0.470  Sum_probs=174.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--------~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      +++|+++++.++|+||+++++++......++||||+++++|.+++...        ...+++..++.++.|++.||.|||
T Consensus        43 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH  122 (262)
T cd00192          43 FLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA  122 (262)
T ss_pred             HHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999999775        467999999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      +.+   ++|+||||+||+++.++.+||+|||.+................++..|+|||.+....++.++|||||||++|+
T Consensus       123 ~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  199 (262)
T cd00192         123 SKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWE  199 (262)
T ss_pred             cCC---cccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHH
Confidence            988   99999999999999999999999999987655432223344567889999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          154 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       154 llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |++ |..||.......   ......    ..          .....+...+.++.+++.+||+.+|.+|||+.+++++|+
T Consensus       200 l~~~g~~p~~~~~~~~---~~~~~~----~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         200 IFTLGATPYPGLSNEE---VLEYLR----KG----------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHhcCCCCCCCCCHHH---HHHHHH----cC----------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            999 589987652211   111100    00          001112233578999999999999999999999999874


No 100
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=100.00  E-value=5.6e-40  Score=282.49  Aligned_cols=213  Identities=28%  Similarity=0.414  Sum_probs=171.1

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC---------------CCCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---------------SLPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---------------~~~l~~~~~~~~~~qi   65 (306)
                      +.+|+++++++ +|+||+++++++..++..++||||+++++|.+++..+               ...+++..++.++.|+
T Consensus        62 ~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  141 (293)
T cd05053          62 LVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQV  141 (293)
T ss_pred             HHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHH
Confidence            56899999999 8999999999999999999999999999999998532               3468899999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||
T Consensus       142 ~~al~~LH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  218 (293)
T cd05053         142 ARGMEFLASKK---CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVW  218 (293)
T ss_pred             HHHHHHHHHCC---ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCccccee
Confidence            99999999988   999999999999999999999999999875443222222223346779999999888999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||++ |..||...........       ....          .....+...+..+.+|+.+||..||++|||+
T Consensus       219 slG~il~el~~~g~~p~~~~~~~~~~~~-------~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  281 (293)
T cd05053         219 SFGVLLWEIFTLGGSPYPGIPVEELFKL-------LKEG----------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTF  281 (293)
T ss_pred             ehhhHHHHHhcCCCCCCCCCCHHHHHHH-------HHcC----------CcCCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence            99999999997 8888865432111110       0000          0001122335688999999999999999999


Q ss_pred             HHHHHHhCCC
Q 021891          225 SEVVEALKPL  234 (306)
Q Consensus       225 ~ell~~l~~~  234 (306)
                      .++++.|+.+
T Consensus       282 ~eil~~l~~~  291 (293)
T cd05053         282 KQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHHh
Confidence            9999998654


No 101
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00  E-value=1.9e-39  Score=280.39  Aligned_cols=213  Identities=26%  Similarity=0.396  Sum_probs=171.7

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |.+|+++++++ +|+||+++++++...+..++||||+.+++|.+++.... ..+++.++..++.|++.||.|||+.+   
T Consensus        85 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---  161 (302)
T cd05055          85 LMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---  161 (302)
T ss_pred             HHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            67899999999 89999999999999999999999999999999986543 34899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      ++|+||||+||+++.++.++|+|||+++...............++..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~  241 (302)
T cd05055         162 CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS  241 (302)
T ss_pred             eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999986544322222223345778999999998889999999999999999998 99


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      .||........  ......    ..      ...    ..+...+..+.+++.+||..+|++|||+.++++.|+.
T Consensus       242 ~p~~~~~~~~~--~~~~~~----~~------~~~----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         242 NPYPGMPVDSK--FYKLIK----EG------YRM----AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             CCcCCCCchHH--HHHHHH----cC------CcC----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            99875432211  111000    00      000    0111224689999999999999999999999998865


No 102
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00  E-value=1.4e-39  Score=274.79  Aligned_cols=209  Identities=25%  Similarity=0.377  Sum_probs=169.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++...+..++||||+++++|.+++..+...+++..++.++.|++.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~  122 (256)
T cd05059          46 FIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FI  122 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            678999999999999999999999999999999999999999999776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..|
T Consensus       123 H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p  201 (256)
T cd05059         123 HRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMP  201 (256)
T ss_pred             cccccHhhEEECCCCcEEECCcccceecccccc-cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCC
Confidence            999999999999999999999999876533211 11112223457999999998899999999999999999999 7888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |........   .....    .      .....    .+...+..+.+++.+||..+|++|||+.++++.|
T Consensus       202 ~~~~~~~~~---~~~~~----~------~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         202 YERFSNSEV---VESVS----A------GYRLY----RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCCHHHH---HHHHH----c------CCcCC----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            875432211   11000    0      00111    1112356899999999999999999999999876


No 103
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00  E-value=9.2e-40  Score=285.65  Aligned_cols=212  Identities=28%  Similarity=0.409  Sum_probs=167.6

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|..++.++ +||||+++++++.+.+..|+|||||++|+|.+++.+. ..+++..+..++.|++.||.|||+.+   +
T Consensus        42 ~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i  117 (329)
T cd05588          42 VQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERG---I  117 (329)
T ss_pred             HHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            56889999998 7999999999999999999999999999999988554 47999999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       118 vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~P  195 (329)
T cd05588         118 IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             EecCCCHHHeEECCCCCEEECcCccccccccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCC
Confidence            999999999999999999999999987532211  122345789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC--cchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 021891          161 MDKNRPNGE--HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL------MSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps------~~ell~~  230 (306)
                      |........  .....+........       ...    ++...+..+.++|.+||+.||.+|+|      +.++++|
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         196 FDIVGMSDNPDQNTEDYLFQVILEK-------QIR----IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             cccccccccccccchHHHHHHHHcC-------CCC----CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            964322211  11111111111000       001    11123467899999999999999997      6777765


No 104
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=100.00  E-value=8.3e-40  Score=285.42  Aligned_cols=203  Identities=26%  Similarity=0.380  Sum_probs=162.3

Q ss_pred             HHHHHHH---hcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            3 QAEVNFL---GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         3 ~~E~~il---~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      .+|++++   +.++||||+++++++.+.+..|+||||+++++|...+..  ..+++..+..++.||+.||.|||+.+   
T Consensus        47 ~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---  121 (324)
T cd05589          47 MCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENK---  121 (324)
T ss_pred             HHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            4555544   567899999999999999999999999999999988744  36899999999999999999999998   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      ++||||||+||+++.++.+||+|||+++......  .......|+..|+|||++.+..++.++|||||||++|+|++|..
T Consensus       122 ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~  199 (324)
T cd05589         122 IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGES  199 (324)
T ss_pred             eEecCCCHHHeEECCCCcEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCC
Confidence            9999999999999999999999999987533221  12234678999999999999899999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  230 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~  230 (306)
                      ||...........      .....        ..    ++...+..+.++|.+||+.||.+||     ++.+++++
T Consensus       200 pf~~~~~~~~~~~------i~~~~--------~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         200 PFPGDDEEEVFDS------IVNDE--------VR----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             CCCCCCHHHHHHH------HHhCC--------CC----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            9976432211100      00000        01    1122356788999999999999999     56677664


No 105
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00  E-value=1e-39  Score=280.50  Aligned_cols=213  Identities=26%  Similarity=0.413  Sum_probs=170.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-----------------------CCCCCHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-----------------------SLPLPWSIR   58 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-----------------------~~~l~~~~~   58 (306)
                      |.+|+++++.++||||+++++.+...+..++|+||+.+++|.+++...                       ...+++..+
T Consensus        50 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  129 (290)
T cd05045          50 LLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDL  129 (290)
T ss_pred             HHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHH
Confidence            678999999999999999999999999999999999999999987532                       134788999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCC
Q 021891           59 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL  138 (306)
Q Consensus        59 ~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  138 (306)
                      +.++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++...............++..|+|||.+.+..+
T Consensus       130 ~~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  206 (290)
T cd05045         130 ISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIY  206 (290)
T ss_pred             HHHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCc
Confidence            999999999999999988   99999999999999999999999999986543322222223345678999999988889


Q ss_pred             CchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCC
Q 021891          139 TSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD  217 (306)
Q Consensus       139 ~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  217 (306)
                      +.++||||||+++++|++ |..||.......   ......    .      ....    ..+...+..+.+++.+||+.+
T Consensus       207 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~----~------~~~~----~~~~~~~~~~~~~i~~cl~~~  269 (290)
T cd05045         207 TTQSDVWSFGVLLWEIVTLGGNPYPGIAPER---LFNLLK----T------GYRM----ERPENCSEEMYNLMLTCWKQE  269 (290)
T ss_pred             chHhHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHh----C------CCCC----CCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999998 999986543211   111100    0      0001    111223568999999999999


Q ss_pred             CCCCCCHHHHHHHhCCC
Q 021891          218 PKARPLMSEVVEALKPL  234 (306)
Q Consensus       218 p~~Rps~~ell~~l~~~  234 (306)
                      |++||++.++++.|+.+
T Consensus       270 P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         270 PDKRPTFADISKELEKM  286 (290)
T ss_pred             cccCCCHHHHHHHHHHH
Confidence            99999999999988754


No 106
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00  E-value=9e-40  Score=284.89  Aligned_cols=195  Identities=28%  Similarity=0.337  Sum_probs=158.0

Q ss_pred             HHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 021891            7 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFK   86 (306)
Q Consensus         7 ~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlk   86 (306)
                      .+++.++||||+++++++.+.+..++||||+++++|.+.+.+. ..+++..+..++.||+.||.|||+.+   |+|||||
T Consensus        48 ~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlk  123 (321)
T cd05603          48 VLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLK  123 (321)
T ss_pred             HHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCC
Confidence            4678899999999999999999999999999999999888544 46899999999999999999999988   9999999


Q ss_pred             CCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Q 021891           87 TSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP  166 (306)
Q Consensus        87 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  166 (306)
                      |+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus       124 p~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  201 (321)
T cd05603         124 PENILLDSQGHVVLTDFGLCKEGVEPE--ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV  201 (321)
T ss_pred             HHHeEECCCCCEEEccCCCCccCCCCC--CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH
Confidence            999999999999999999987532221  122345789999999999988999999999999999999999999976432


Q ss_pred             CCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          167 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      ..   ..   .......        .    .++...+..+.+++.+||+.||.+||++.
T Consensus       202 ~~---~~---~~i~~~~--------~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         202 SQ---MY---DNILHKP--------L----QLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HH---HH---HHHhcCC--------C----CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            11   11   1000000        0    01112346788999999999999999764


No 107
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=2.7e-39  Score=285.64  Aligned_cols=222  Identities=23%  Similarity=0.315  Sum_probs=165.5

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      ..|+.++++++|+||+++++++...+..++|||++. ++|.+++......+++..++.++.||+.||.|||+.+   |+|
T Consensus       105 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH  180 (357)
T PHA03209        105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIH  180 (357)
T ss_pred             HHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eec
Confidence            579999999999999999999999999999999995 5899988777778999999999999999999999998   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      |||||+||+++.++.+||+|||+++......   ......||..|+|||++.+..++.++|||||||++|||+++..++.
T Consensus       181 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        181 RDVKTENIFINDVDQVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             CCCCHHHEEECCCCCEEEecCccccccccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence            9999999999999999999999997532211   1233568999999999999899999999999999999998765554


Q ss_pred             CCCCCCCcchHHhh-------hhhhc-cccccc---------cccC------CccCC---CCCHHHHHHHHHHHHHcccC
Q 021891          163 KNRPNGEHNLVEWA-------RPHLG-ERRRFY---------RLID------PRLEG---HFSIKGAQKAAQLAAHCLSR  216 (306)
Q Consensus       163 ~~~~~~~~~~~~~~-------~~~~~-~~~~~~---------~~~~------~~~~~---~~~~~~~~~~~~li~~~l~~  216 (306)
                      ..............       ..... ....+.         ..++      .....   ......+.++.+||.+||+.
T Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~  337 (357)
T PHA03209        258 EDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTF  337 (357)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcC
Confidence            33222111000000       00000 000000         0000      00000   00012245667899999999


Q ss_pred             CCCCCCCHHHHHHHh
Q 021891          217 DPKARPLMSEVVEAL  231 (306)
Q Consensus       217 ~p~~Rps~~ell~~l  231 (306)
                      ||++|||+.|+++|-
T Consensus       338 dP~~Rpta~e~l~hp  352 (357)
T PHA03209        338 DAAMRPSAEEILNYP  352 (357)
T ss_pred             CcccCcCHHHHhcCc
Confidence            999999999999863


No 108
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00  E-value=5.3e-40  Score=286.08  Aligned_cols=205  Identities=26%  Similarity=0.367  Sum_probs=166.0

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|.+++..+ +||||+++++++.+.+..|+||||+++|+|.+++.+. ..+++..+..++.|++.||.|||+.+   +
T Consensus        42 ~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~---i  117 (320)
T cd05590          42 TMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKG---I  117 (320)
T ss_pred             HHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            45688888776 7999999999999999999999999999999988654 46999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++......  .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       118 vH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~P  195 (320)
T cd05590         118 IYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAP  195 (320)
T ss_pred             EeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCC
Confidence            999999999999999999999999987532221  122345789999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~------~ell~~  230 (306)
                      |........   ...   .....        ..    ++...+.++.+|+.+||+.||++||++      +++++|
T Consensus       196 f~~~~~~~~---~~~---i~~~~--------~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         196 FEAENEDDL---FEA---ILNDE--------VV----YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             CCCCCHHHH---HHH---HhcCC--------CC----CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            976532211   110   00000        00    111235688999999999999999998      666654


No 109
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00  E-value=9.7e-40  Score=291.45  Aligned_cols=214  Identities=23%  Similarity=0.384  Sum_probs=170.7

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------------------------------
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------------------   50 (306)
                      |.+|+++|+++. ||||+++++++.+.+..|+|||||++|+|.+++.++.                              
T Consensus        87 ~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (400)
T cd05105          87 LMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSY  166 (400)
T ss_pred             HHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccch
Confidence            678999999996 9999999999999999999999999999999875421                              


Q ss_pred             -----------------------------------------------------------------CCCCHHHHHHHHHHH
Q 021891           51 -----------------------------------------------------------------LPLPWSIRMKIALGA   65 (306)
Q Consensus        51 -----------------------------------------------------------------~~l~~~~~~~~~~qi   65 (306)
                                                                                       ..+++..+..++.||
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi  246 (400)
T cd05105         167 VILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQV  246 (400)
T ss_pred             hhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHH
Confidence                                                                             247788889999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||
T Consensus       247 ~~aL~~LH~~~---ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  323 (400)
T cd05105         247 ARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW  323 (400)
T ss_pred             HHHHHHHHhCC---eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence            99999999988   999999999999999999999999999865433222222334567789999999988999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||++ |..||........  ...    .....      ....    .+...+..+.+++.+||+.||++|||+
T Consensus       324 SlGvil~ellt~g~~P~~~~~~~~~--~~~----~~~~~------~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~  387 (400)
T cd05105         324 SYGILLWEIFSLGGTPYPGMIVDST--FYN----KIKSG------YRMA----KPDHATQEVYDIMVKCWNSEPEKRPSF  387 (400)
T ss_pred             HHHHHHHHHHHCCCCCCcccchhHH--HHH----HHhcC------CCCC----CCccCCHHHHHHHHHHCccCHhHCcCH
Confidence            99999999997 8899875432111  000    00000      0011    112345788999999999999999999


Q ss_pred             HHHHHHhCCC
Q 021891          225 SEVVEALKPL  234 (306)
Q Consensus       225 ~ell~~l~~~  234 (306)
                      .+|.+.|+.+
T Consensus       388 ~~l~~~l~~l  397 (400)
T cd05105         388 LHLSDIVESL  397 (400)
T ss_pred             HHHHHHHHHH
Confidence            9999988754


No 110
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00  E-value=6.8e-40  Score=292.05  Aligned_cols=212  Identities=24%  Similarity=0.324  Sum_probs=165.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++++++|+||+++++++.+.+.+++|||||++|+|.+++.+.. .+++..+..++.||+.||.|||+.+   |+
T Consensus        48 ~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g---iv  123 (381)
T cd05626          48 VKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG---FI  123 (381)
T ss_pred             HHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            5789999999999999999999999999999999999999999986544 6899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc---------------------------------------------e
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT---------------------------------------------H  116 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------~  116 (306)
                      ||||||+|||++.++.+||+|||+++........                                             .
T Consensus       124 HrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (381)
T cd05626         124 HRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRC  203 (381)
T ss_pred             ecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccc
Confidence            9999999999999999999999997543110000                                             0


Q ss_pred             eeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCC
Q 021891          117 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG  196 (306)
Q Consensus       117 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (306)
                      .....+||..|+|||++.+..++.++|||||||++|||++|..||...........+      ......    .  ... 
T Consensus       204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i------~~~~~~----~--~~~-  270 (381)
T cd05626         204 LAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKV------INWENT----L--HIP-  270 (381)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHH------Hccccc----c--CCC-
Confidence            012356999999999999889999999999999999999999999765432111000      000000    0  000 


Q ss_pred             CCCHHHHHHHHHHHHHcc--cCCCCCCCCHHHHHHHh
Q 021891          197 HFSIKGAQKAAQLAAHCL--SRDPKARPLMSEVVEAL  231 (306)
Q Consensus       197 ~~~~~~~~~~~~li~~~l--~~~p~~Rps~~ell~~l  231 (306)
                       .....+.++.+||.+|+  ..++..|+++.++++|.
T Consensus       271 -~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp  306 (381)
T cd05626         271 -PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHP  306 (381)
T ss_pred             -CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence             01123467889998854  55666699999999864


No 111
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00  E-value=2.7e-39  Score=273.73  Aligned_cols=211  Identities=25%  Similarity=0.378  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|++++++++|+||+++++++...+..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+   +
T Consensus        48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i  124 (261)
T cd05068          48 FLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---Y  124 (261)
T ss_pred             HHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            6789999999999999999999999999999999999999999986543 56899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.+||+|||++........ ........+..|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       125 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~  203 (261)
T cd05068         125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRM  203 (261)
T ss_pred             eeccCCcceEEEcCCCCEEECCcceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999987643211 11111223457999999988899999999999999999999 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ...    .....      ...    ..+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       204 p~~~~~~~~---~~~----~~~~~------~~~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         204 PYPGMTNAE---VLQ----QVDQG------YRM----PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCCCCCHHH---HHH----HHHcC------CCC----CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            986543211   111    00000      000    0111235789999999999999999999999998874


No 112
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=100.00  E-value=6.4e-40  Score=286.28  Aligned_cols=207  Identities=26%  Similarity=0.298  Sum_probs=164.8

Q ss_pred             HHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 021891            7 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFK   86 (306)
Q Consensus         7 ~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlk   86 (306)
                      .+++.++|+||+++++++...+..++||||+++++|.+++... ..+.+..+..++.||+.||.|||+.+   |+|||||
T Consensus        48 ~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlk  123 (325)
T cd05602          48 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLK  123 (325)
T ss_pred             HHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCC
Confidence            3577899999999999999999999999999999999988654 46888999999999999999999998   9999999


Q ss_pred             CCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Q 021891           87 TSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP  166 (306)
Q Consensus        87 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  166 (306)
                      |+||+++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       124 p~Nili~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  201 (325)
T cd05602         124 PENILLDSQGHIVLTDFGLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT  201 (325)
T ss_pred             HHHeEECCCCCEEEccCCCCcccccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH
Confidence            9999999999999999999875432211  22345789999999999999999999999999999999999999975432


Q ss_pred             CCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCCC
Q 021891          167 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNL  237 (306)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  237 (306)
                      ...   ....   ....        ..    +....+..+.+++.+||+.||.+|+++.+.+..+.....+
T Consensus       202 ~~~---~~~i---~~~~--------~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~  254 (325)
T cd05602         202 AEM---YDNI---LNKP--------LQ----LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFF  254 (325)
T ss_pred             HHH---HHHH---HhCC--------cC----CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCccc
Confidence            211   1110   0000        00    1112346789999999999999999987655554444443


No 113
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00  E-value=9.4e-40  Score=289.38  Aligned_cols=211  Identities=25%  Similarity=0.336  Sum_probs=164.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++.+++|+||+++++.+.+....|+|||||++|+|.+++.+. ..+++..+..++.|++.||.|||+.+   |+
T Consensus        48 ~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~g---iv  123 (363)
T cd05628          48 IRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLG---FI  123 (363)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eE
Confidence            568999999999999999999999999999999999999999998654 47999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc---------------------------------eeeeccccccccc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT---------------------------------HVSTRVMGTYGYA  128 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~  128 (306)
                      ||||||+|||++.++.+||+|||+++........                                 ......+||..|+
T Consensus       124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~  203 (363)
T cd05628         124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYI  203 (363)
T ss_pred             ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcccc
Confidence            9999999999999999999999998754321100                                 0012357999999


Q ss_pred             CCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHH
Q 021891          129 APEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ  208 (306)
Q Consensus       129 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (306)
                      |||++.+..++.++|||||||++|||++|..||...........+.      .....  ..+.+.      ...+.++.+
T Consensus       204 aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~------~~~~~--~~~p~~------~~~s~~~~~  269 (363)
T cd05628         204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVM------NWKET--LIFPPE------VPISEKAKD  269 (363)
T ss_pred             CHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH------cCcCc--ccCCCc------CCCCHHHHH
Confidence            9999999999999999999999999999999997654321111100      00000  001110      012467888


Q ss_pred             HHHHccc--CCCCCCCCHHHHHHH
Q 021891          209 LAAHCLS--RDPKARPLMSEVVEA  230 (306)
Q Consensus       209 li~~~l~--~~p~~Rps~~ell~~  230 (306)
                      +|.+|+.  .++..||+++||++|
T Consensus       270 li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         270 LILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHHHcCChhhcCCCCCHHHHhCC
Confidence            8888664  233456899999986


No 114
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00  E-value=7.3e-40  Score=284.73  Aligned_cols=204  Identities=28%  Similarity=0.425  Sum_probs=164.0

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..|..++..+ +||||+++++++..++..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+   |+
T Consensus        43 ~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~---iv  118 (316)
T cd05592          43 MVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKG---II  118 (316)
T ss_pred             HHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence            3566666654 89999999999999999999999999999999886544 6899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       119 H~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf  196 (316)
T cd05592         119 YRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             eCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCC
Confidence            99999999999999999999999997643322  2233467899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-ell~~  230 (306)
                      ........   ..   .....        .+    .++...+.++.+|+.+||+.||.+||++. +++++
T Consensus       197 ~~~~~~~~---~~---~i~~~--------~~----~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05592         197 HGEDEDEL---FD---SILND--------RP----HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH  248 (316)
T ss_pred             CCCCHHHH---HH---HHHcC--------CC----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            76432111   10   00000        01    11222356788999999999999999875 56554


No 115
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00  E-value=8.9e-40  Score=286.00  Aligned_cols=211  Identities=23%  Similarity=0.259  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |++|+++++.++|+||+++++++.+.+..++||||+++++|.+++.+....+++..+..++.|++.||.|||+.+   |+
T Consensus        48 ~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~  124 (330)
T cd05601          48 FEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YV  124 (330)
T ss_pred             HHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            678999999999999999999999999999999999999999999776568999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh------cCCCCchhHHHHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM------TGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~il~ell  155 (306)
                      ||||||+||+++.++.+||+|||++......... ......||..|+|||++.      ...++.++|||||||++|+|+
T Consensus       125 H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~  203 (330)
T cd05601         125 HRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMI  203 (330)
T ss_pred             cccCchHheEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeec
Confidence            9999999999999999999999999875443222 223356899999999986      456789999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +|..||........   .   .... ..........       ....+..+.+|+.+||+ +|.+|||+.++++|.
T Consensus       204 ~g~~Pf~~~~~~~~---~---~~i~-~~~~~~~~~~-------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~  264 (330)
T cd05601         204 YGRSPFHEGTSAKT---Y---NNIM-NFQRFLKFPE-------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP  264 (330)
T ss_pred             cCCCCCCCCCHHHH---H---HHHH-cCCCccCCCC-------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence            99999976432111   0   0000 0000000000       01235678999999998 999999999999864


No 116
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00  E-value=2.6e-39  Score=273.96  Aligned_cols=210  Identities=24%  Similarity=0.356  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++++++||||+++++++.+++..++|+||+++++|.+++.... .+++..+..++.|++.||.|||+.+   ++
T Consensus        51 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~---i~  126 (263)
T cd06625          51 LECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNM---IV  126 (263)
T ss_pred             HHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            5789999999999999999999999999999999999999999886543 6899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+|+||+++.++.++|+|||+++.......... .....|+..|+|||++.+..++.++||||||+++|+|++|+.|
T Consensus       127 H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  206 (263)
T cd06625         127 HRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPP  206 (263)
T ss_pred             cCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876533211111 1234578899999999988899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |........   .   .....          ......++...+..+.+++.+||..+|++|||+.+++++.
T Consensus       207 ~~~~~~~~~---~---~~~~~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         207 WAEFEAMAA---I---FKIAT----------QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             ccccchHHH---H---HHHhc----------cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence            865422110   0   00000          0001112223456889999999999999999999999864


No 117
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=100.00  E-value=1.6e-39  Score=277.41  Aligned_cols=211  Identities=27%  Similarity=0.431  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      |.+|+++++.++|+||+++++++......++||||+++++|.+++....         ..+++..++.++.|++.||.||
T Consensus        56 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  135 (277)
T cd05032          56 FLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL  135 (277)
T ss_pred             HHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999986432         2468889999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      |+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|
T Consensus       136 H~~~---i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (277)
T cd05032         136 AAKK---FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW  212 (277)
T ss_pred             HhCC---ccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence            9988   9999999999999999999999999987654432222223345678899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||++ |..||........   ..+..    ...      ...    .+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus       213 el~t~g~~p~~~~~~~~~---~~~~~----~~~------~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l  275 (277)
T cd05032         213 EMATLAEQPYQGLSNEEV---LKFVI----DGG------HLD----LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL  275 (277)
T ss_pred             HhhccCCCCCccCCHHHH---HHHHh----cCC------CCC----CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence            9998 8888865432211   11111    000      001    1112257889999999999999999999999987


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      +
T Consensus       276 ~  276 (277)
T cd05032         276 K  276 (277)
T ss_pred             c
Confidence            5


No 118
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00  E-value=8.1e-40  Score=281.11  Aligned_cols=222  Identities=23%  Similarity=0.303  Sum_probs=165.0

Q ss_pred             HHHHHHHHhcC---CCCcccceeeEEEe-----CCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDL---VHLNLVKLIGYCIE-----DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l---~H~niv~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      +.+|+++++.+   +||||+++++++..     ....++||||+. ++|.+++... ...+++..++.++.||+.||.||
T Consensus        48 ~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l  126 (290)
T cd07862          48 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL  126 (290)
T ss_pred             HHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45677777766   69999999999863     456899999996 5999988654 34589999999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      |+.+   ++||||||+|||++.++.+||+|||+++.....   .......|+..|+|||++.+..++.++|||||||++|
T Consensus       127 H~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~  200 (290)
T cd07862         127 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA  200 (290)
T ss_pred             HHCC---eeeCCCCHHHEEEcCCCCEEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHH
Confidence            9988   999999999999999999999999999865432   1223456899999999998889999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcchHHhhhh-----hhcccccc-ccccCCcc---CCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 021891          153 EMLTGRRSMDKNRPNGEHNLVEWARP-----HLGERRRF-YRLIDPRL---EGHFSIKGAQKAAQLAAHCLSRDPKARPL  223 (306)
Q Consensus       153 elltg~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps  223 (306)
                      ||++|.+||......+....+.....     .+.....+ ...+.+..   ........+..+.+|+.+||+.||++|||
T Consensus       201 el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s  280 (290)
T cd07862         201 EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS  280 (290)
T ss_pred             HHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC
Confidence            99999999987544322111110000     00000000 00000000   00011123567889999999999999999


Q ss_pred             HHHHHHH
Q 021891          224 MSEVVEA  230 (306)
Q Consensus       224 ~~ell~~  230 (306)
                      +.++++|
T Consensus       281 ~~~~l~h  287 (290)
T cd07862         281 AYSALSH  287 (290)
T ss_pred             HHHHhcC
Confidence            9999975


No 119
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00  E-value=3.2e-39  Score=272.67  Aligned_cols=210  Identities=24%  Similarity=0.343  Sum_probs=167.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.+++.++|+||+++++++. .+..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+   ++
T Consensus        43 ~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~  117 (257)
T cd05116          43 LLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETN---FV  117 (257)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            678999999999999999999875 45779999999999999998654 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      ||||||.||+++.++.+||+|||+++.......... .....++..|+|||.+....++.++|||||||++|||++ |..
T Consensus       118 H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~  197 (257)
T cd05116         118 HRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQK  197 (257)
T ss_pred             ecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987544322111 122234578999999988889999999999999999998 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ......    ...      .+.    .+...+.++.++|.+||+.||++||++.+|.+.|+.
T Consensus       198 p~~~~~~~~---~~~~i~----~~~------~~~----~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         198 PYKGMKGNE---VTQMIE----SGE------RME----CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCCCHHH---HHHHHH----CCC------CCC----CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            997543221   111111    000      011    112235688999999999999999999999998864


No 120
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00  E-value=8.9e-40  Score=290.95  Aligned_cols=211  Identities=24%  Similarity=0.299  Sum_probs=166.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|+++|++++|+||+++++.+.+++.+++|||||++|+|.+++.+.+ .+++..+..++.||+.||.|||+.+   |+
T Consensus        48 ~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~---iv  123 (376)
T cd05598          48 VKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMG---FI  123 (376)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            5789999999999999999999999999999999999999999996554 6899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCC-----------------------------------------cceeeec
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGD-----------------------------------------KTHVSTR  120 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-----------------------------------------~~~~~~~  120 (306)
                      ||||||+|||++.++.+||+|||++..+....                                         .......
T Consensus       124 HrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (376)
T cd05598         124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHS  203 (376)
T ss_pred             eCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccc
Confidence            99999999999999999999999975321000                                         0000113


Q ss_pred             ccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCH
Q 021891          121 VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI  200 (306)
Q Consensus       121 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (306)
                      ..||+.|+|||++.+..++.++|||||||++|||++|..||...........+      . ....   ......    ..
T Consensus       204 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i------~-~~~~---~~~~~~----~~  269 (376)
T cd05598         204 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKV------I-NWET---TLHIPS----QA  269 (376)
T ss_pred             cCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHH------h-ccCc---cccCCC----CC
Confidence            47999999999999989999999999999999999999999765432111100      0 0000   000000    11


Q ss_pred             HHHHHHHHHHHHcccCCCCCCC---CHHHHHHHh
Q 021891          201 KGAQKAAQLAAHCLSRDPKARP---LMSEVVEAL  231 (306)
Q Consensus       201 ~~~~~~~~li~~~l~~~p~~Rp---s~~ell~~l  231 (306)
                      ..+..+.++|.+|+ .+|.+|+   ++.++++|.
T Consensus       270 ~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~  302 (376)
T cd05598         270 KLSREASDLILRLC-CGAEDRLGKNGADEIKAHP  302 (376)
T ss_pred             CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCC
Confidence            23467888999976 5999999   899999874


No 121
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=100.00  E-value=4.5e-40  Score=292.91  Aligned_cols=212  Identities=22%  Similarity=0.285  Sum_probs=165.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++++++||||+++++++.+.+..|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+   |+
T Consensus        48 ~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g---iv  123 (377)
T cd05629          48 VKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG---FI  123 (377)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            578999999999999999999999999999999999999999998654 46899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc---------------------------------------------e
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT---------------------------------------------H  116 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------~  116 (306)
                      ||||||+|||++.++.+||+|||+++.+......                                             .
T Consensus       124 HrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (377)
T cd05629         124 HRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL  203 (377)
T ss_pred             ccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc
Confidence            9999999999999999999999998643211000                                             0


Q ss_pred             eeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCC
Q 021891          117 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG  196 (306)
Q Consensus       117 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (306)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|..||...........+   . .+..  .+ ..  +.   
T Consensus       204 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i---~-~~~~--~~-~~--p~---  271 (377)
T cd05629         204 MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKI---I-NWRE--TL-YF--PD---  271 (377)
T ss_pred             cccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHH---H-ccCC--cc-CC--CC---
Confidence            001246899999999999889999999999999999999999999764332111000   0 0000  00 00  00   


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHHhC
Q 021891          197 HFSIKGAQKAAQLAAHCLSRDPKAR---PLMSEVVEALK  232 (306)
Q Consensus       197 ~~~~~~~~~~~~li~~~l~~~p~~R---ps~~ell~~l~  232 (306)
                        ....+.++.+||.+||. +|.+|   +|+.++++|..
T Consensus       272 --~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~  307 (377)
T cd05629         272 --DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF  307 (377)
T ss_pred             --CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence              01124678899999997 77765   59999998753


No 122
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00  E-value=1.3e-39  Score=283.18  Aligned_cols=205  Identities=28%  Similarity=0.378  Sum_probs=164.8

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +..|..++..+ +||||+++++++.+++..|+||||+.+++|.+++... ..+++..+..++.|++.||+|||+.+   |
T Consensus        42 ~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i  117 (316)
T cd05620          42 TMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKG---I  117 (316)
T ss_pred             HHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            35677777654 8999999999999999999999999999999988654 46899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|||++|..|
T Consensus       118 vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~P  195 (316)
T cd05620         118 IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSP  195 (316)
T ss_pred             EecCCCHHHeEECCCCCEEeCccCCCeecccCC--CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence            999999999999999999999999987532221  123346789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-ell~~  230 (306)
                      |.......   ......           ...+..    +...+.++.+||.+||+.||++||++. ++++|
T Consensus       196 f~~~~~~~---~~~~~~-----------~~~~~~----~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         196 FHGDDEDE---LFESIR-----------VDTPHY----PRWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             CCCCCHHH---HHHHHH-----------hCCCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            97543211   111000           001111    112346788999999999999999974 66654


No 123
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00  E-value=3.5e-39  Score=277.90  Aligned_cols=218  Identities=27%  Similarity=0.425  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----------LPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      |.+|++++++++||||+++++++..++..++||||+++++|.+++.+..          ..+++..++.++.|++.||.|
T Consensus        66 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~  145 (296)
T cd05051          66 FLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRY  145 (296)
T ss_pred             HHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999986543          268999999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  151 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  151 (306)
                      ||+.+   ++|+||||+||+++.++.++|+|||+++...............++..|+|||++.+..++.++|||||||++
T Consensus       146 LH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l  222 (296)
T cd05051         146 LESLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL  222 (296)
T ss_pred             HHHcC---ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHH
Confidence            99988   999999999999999999999999999865443322333344567789999999888899999999999999


Q ss_pred             HHHHh--CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          152 LEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       152 ~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      |||++  +..||.......   ............       ........+...+.++.+++.+||+.||.+|||+.+|++
T Consensus       223 ~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         223 WEILTLCREQPYEHLTDQQ---VIENAGHFFRDD-------GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHhcCCCCCCCCcChHH---HHHHHHhccccc-------cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            99998  667775432211   111111100000       000000111223468999999999999999999999999


Q ss_pred             HhC
Q 021891          230 ALK  232 (306)
Q Consensus       230 ~l~  232 (306)
                      .|+
T Consensus       293 ~L~  295 (296)
T cd05051         293 FLQ  295 (296)
T ss_pred             Hhc
Confidence            885


No 124
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00  E-value=5.6e-40  Score=292.80  Aligned_cols=211  Identities=26%  Similarity=0.314  Sum_probs=165.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++.+++..++|||||++|+|.+++.+. ..+++..+..++.||+.||.|||+.+   |+
T Consensus        48 ~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~---iv  123 (382)
T cd05625          48 VKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMG---FI  123 (382)
T ss_pred             HHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            578999999999999999999999999999999999999999998655 36899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCC---------------------------------------------cce
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGD---------------------------------------------KTH  116 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------~~~  116 (306)
                      ||||||+|||++.+|.+||+|||+++......                                             ...
T Consensus       124 HrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (382)
T cd05625         124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRC  203 (382)
T ss_pred             cCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence            99999999999999999999999975321000                                             000


Q ss_pred             eeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCC
Q 021891          117 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG  196 (306)
Q Consensus       117 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (306)
                      ......||+.|+|||++.+..++.++|||||||++|||++|..||...........      .......   ...+    
T Consensus       204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~------i~~~~~~---~~~p----  270 (382)
T cd05625         204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMK------VINWQTS---LHIP----  270 (382)
T ss_pred             cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHH------HHccCCC---cCCC----
Confidence            01234689999999999998999999999999999999999999976533211000      0000000   0000    


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHh
Q 021891          197 HFSIKGAQKAAQLAAHCLSRDPKARPL---MSEVVEAL  231 (306)
Q Consensus       197 ~~~~~~~~~~~~li~~~l~~~p~~Rps---~~ell~~l  231 (306)
                       .....+.++.++|.+|+ .+|.+|++   +.++++|.
T Consensus       271 -~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp  306 (382)
T cd05625         271 -PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHP  306 (382)
T ss_pred             -CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCC
Confidence             01123467889998876 59999987   88888763


No 125
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00  E-value=2.7e-39  Score=273.62  Aligned_cols=210  Identities=30%  Similarity=0.450  Sum_probs=171.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.++|+||+++++++.+.+..++||||+++++|.+++... +..+++..+..++.|++.||.|||+.+   +
T Consensus        49 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i  125 (261)
T cd05148          49 FQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---S  125 (261)
T ss_pred             HHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            678999999999999999999999999999999999999999999753 456899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.+||+|||++........  ......++..|+|||.+....++.++||||||+++|+|++ |..
T Consensus       126 ~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~  203 (261)
T cd05148         126 IHRDLAARNILVGEDLVCKVADFGLARLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV  203 (261)
T ss_pred             eccccCcceEEEcCCceEEEccccchhhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999977543221  1123345678999999988889999999999999999998 889


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ......    ..      ...    ..+...+..+.+++.+||+.||.+|||+.++++.|+.
T Consensus       204 p~~~~~~~~---~~~~~~----~~------~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         204 PYPGMNNHE---VYDQIT----AG------YRM----PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCcCCHHH---HHHHHH----hC------CcC----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            986543211   111111    00      000    1122335788999999999999999999999999874


No 126
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00  E-value=4.7e-40  Score=291.55  Aligned_cols=211  Identities=24%  Similarity=0.330  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|+++|+.++||||+++++++.+++..|+|||||++|+|.+++...+ .+++..+..++.||+.||.|||+.+   |+
T Consensus        48 ~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~---iv  123 (364)
T cd05599          48 VRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLG---YI  123 (364)
T ss_pred             HHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            5689999999999999999999999999999999999999999986554 6999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce------------------------------------eeecccccc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH------------------------------------VSTRVMGTY  125 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------------~~~~~~gt~  125 (306)
                      ||||||+|||++.++.+||+|||++..........                                    .....+||+
T Consensus       124 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  203 (364)
T cd05599         124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTP  203 (364)
T ss_pred             eccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCc
Confidence            99999999999999999999999987543211000                                    011246899


Q ss_pred             cccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHH
Q 021891          126 GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK  205 (306)
Q Consensus       126 ~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (306)
                      .|+|||++....++.++|||||||++|||++|..||.........   .   ........   ...+   .  ....+..
T Consensus       204 ~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~---~---~i~~~~~~---~~~~---~--~~~~s~~  269 (364)
T cd05599         204 DYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETY---R---KIINWKET---LQFP---D--EVPLSPE  269 (364)
T ss_pred             cccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHH---H---HHHcCCCc---cCCC---C--CCCCCHH
Confidence            999999999889999999999999999999999999765432110   0   00000000   0000   0  0123468


Q ss_pred             HHHHHHHcccCCCCCCCC---HHHHHHHh
Q 021891          206 AAQLAAHCLSRDPKARPL---MSEVVEAL  231 (306)
Q Consensus       206 ~~~li~~~l~~~p~~Rps---~~ell~~l  231 (306)
                      +.+||.+||. +|.+|++   +.++++|.
T Consensus       270 ~~~li~~ll~-~p~~R~~~~~~~~ll~h~  297 (364)
T cd05599         270 AKDLIKRLCC-EAERRLGNNGVNEIKSHP  297 (364)
T ss_pred             HHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence            8899999996 9999997   99998864


No 127
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00  E-value=1.2e-39  Score=283.57  Aligned_cols=206  Identities=27%  Similarity=0.390  Sum_probs=167.4

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|.+++..+ +||||+++++++.+.+..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+   +
T Consensus        42 ~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~---i  117 (318)
T cd05570          42 TMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERG---I  117 (318)
T ss_pred             HHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            45788888888 7999999999999999999999999999999988654 36999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++.......  ......|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       118 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~p  195 (318)
T cd05570         118 IYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSP  195 (318)
T ss_pred             EccCCCHHHeEECCCCcEEecccCCCeecCcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCC
Confidence            9999999999999999999999999875322111  12335689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~ell~~l  231 (306)
                      |........   ..   .....        ...    ++...+..+.+||.+||+.||++|||+     .+++++-
T Consensus       196 f~~~~~~~~---~~---~i~~~--------~~~----~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~  253 (318)
T cd05570         196 FEGDDEDEL---FQ---SILED--------EVR----YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP  253 (318)
T ss_pred             CCCCCHHHH---HH---HHHcC--------CCC----CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence            975432111   10   00000        001    112235688999999999999999999     8888753


No 128
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00  E-value=2.1e-39  Score=283.14  Aligned_cols=212  Identities=30%  Similarity=0.399  Sum_probs=168.5

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+.++.++ +||||+++++++.+.+..|+||||+++++|.+++... ..+++..+..++.||+.||+|||+.+   +
T Consensus        42 ~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---i  117 (327)
T cd05617          42 VQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERG---I  117 (327)
T ss_pred             HHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            56889999888 6999999999999999999999999999999988554 36999999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       118 vHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~p  195 (327)
T cd05617         118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP  195 (327)
T ss_pred             eccCCCHHHEEEeCCCCEEEeccccceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCC
Confidence            999999999999999999999999987532211  122346789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~------~ell~~  230 (306)
                      |.............+........       ...    ++...+..+.+++.+||+.||++|+++      .++++|
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~~~-------~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         196 FDIITDNPDMNTEDYLFQVILEK-------PIR----IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             CCccCCCcccccHHHHHHHHHhC-------CCC----CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            97543332222221111111110       001    112234678899999999999999984      577665


No 129
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=100.00  E-value=2.1e-39  Score=277.95  Aligned_cols=210  Identities=28%  Similarity=0.365  Sum_probs=170.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.++||||+++++++..++..++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+   +
T Consensus        47 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i  123 (285)
T cd05605          47 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---I  123 (285)
T ss_pred             HHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            467999999999999999999999999999999999999999888654 346899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||++++++.++|+|||++........   .....|+..|+|||++.+..++.++||||+||++|||++|..|
T Consensus       124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~p  200 (285)
T cd05605         124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSP  200 (285)
T ss_pred             EecCCCHHHEEECCCCCEEEeeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCC
Confidence            9999999999999999999999999986543221   2234689999999999988899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      |...........+   ......           ....++...+..+.+|+.+||..||++||     ++.+++++.
T Consensus       201 f~~~~~~~~~~~~---~~~~~~-----------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~  262 (285)
T cd05605         201 FRQRKEKVKREEV---ERRVKE-----------DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHP  262 (285)
T ss_pred             CCCCchhhHHHHH---HHHhhh-----------cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCc
Confidence            9764332111111   000000           00112223456789999999999999999     888888763


No 130
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=2.6e-39  Score=279.87  Aligned_cols=215  Identities=25%  Similarity=0.391  Sum_probs=171.6

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      +.+|+++++.+ +||||+++++++......++||||+++++|.+++.+..               ..+++..+..++.||
T Consensus        67 ~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi  146 (304)
T cd05101          67 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQV  146 (304)
T ss_pred             HHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHH
Confidence            67899999999 89999999999999999999999999999999986532               247888899999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||
T Consensus       147 ~~al~~LH~~g---ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  223 (304)
T cd05101         147 ARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  223 (304)
T ss_pred             HHHHHHHHHCC---eeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHH
Confidence            99999999988   999999999999999999999999999876443322222233456789999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      |||+++|+|++ |..||........      .. .......          ...+...+..+.+|+.+||+.+|.+|||+
T Consensus       224 slG~~l~el~~~g~~p~~~~~~~~~------~~-~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~  286 (304)
T cd05101         224 SFGVLMWEIFTLGGSPYPGIPVEEL------FK-LLKEGHR----------MDKPANCTNELYMMMRDCWHAIPSHRPTF  286 (304)
T ss_pred             HHHHHHHHHHcCCCCCcccCCHHHH------HH-HHHcCCc----------CCCCCCCCHHHHHHHHHHcccChhhCCCH
Confidence            99999999998 7788765422111      11 0001000          00112335789999999999999999999


Q ss_pred             HHHHHHhCCCCC
Q 021891          225 SEVVEALKPLPN  236 (306)
Q Consensus       225 ~ell~~l~~~~~  236 (306)
                      .++++.|+.+..
T Consensus       287 ~e~l~~l~~~~~  298 (304)
T cd05101         287 KQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHHHHHHH
Confidence            999999876543


No 131
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=100.00  E-value=2.4e-39  Score=281.44  Aligned_cols=204  Identities=27%  Similarity=0.414  Sum_probs=164.6

Q ss_pred             HHHHHHHhc-CCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGD-LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~-l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..|..+++. ++||||+++++++.+.+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+   ++
T Consensus        43 ~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---iv  118 (316)
T cd05619          43 MVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKG---IV  118 (316)
T ss_pred             HHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eE
Confidence            457777776 49999999999999999999999999999999998654 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.+||+|||+++.......  ......||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       119 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf  196 (316)
T cd05619         119 YRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             eCCCCHHHEEECCCCCEEEccCCcceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence            999999999999999999999999875322211  223457899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS-EVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-ell~~  230 (306)
                      .......   ......           ...+.    ++...+.++.+++.+||+.||++||++. +++++
T Consensus       197 ~~~~~~~---~~~~i~-----------~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05619         197 HGHDEEE---LFQSIR-----------MDNPC----YPRWLTREAKDILVKLFVREPERRLGVKGDIRQH  248 (316)
T ss_pred             CCCCHHH---HHHHHH-----------hCCCC----CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence            7643211   111100           00111    1112346788999999999999999997 66654


No 132
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00  E-value=4.8e-39  Score=273.24  Aligned_cols=211  Identities=28%  Similarity=0.459  Sum_probs=169.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC------CCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR------SLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~------~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      |.+|+++++.++||||+++++++...+..++||||+++++|.+++.+.      ...+++..+..++.|++.||.|||+.
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (269)
T cd05044          46 FLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM  125 (269)
T ss_pred             HHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999999999999998642      23478899999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCC-----cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADY-----NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      +   ++|+||||+||+++.++     .++|+|||++................++..|+|||.+.+..++.++|||||||+
T Consensus       126 ~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  202 (269)
T cd05044         126 H---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVL  202 (269)
T ss_pred             C---cccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHH
Confidence            8   99999999999999887     899999999976543322222223345678999999998899999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      +|+|++ |..||......   ......    ....          ....+...+..+.++|.+||..+|.+||++.++++
T Consensus       203 l~ellt~g~~p~~~~~~~---~~~~~~----~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         203 MWEILTLGQQPYPALNNQ---EVLQHV----TAGG----------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHHcCCCCCcccCHH---HHHHHH----hcCC----------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999998 99998643221   111110    0000          00112234678899999999999999999999999


Q ss_pred             HhC
Q 021891          230 ALK  232 (306)
Q Consensus       230 ~l~  232 (306)
                      .|+
T Consensus       266 ~l~  268 (269)
T cd05044         266 ILQ  268 (269)
T ss_pred             HHh
Confidence            875


No 133
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00  E-value=1e-39  Score=284.48  Aligned_cols=206  Identities=26%  Similarity=0.366  Sum_probs=167.0

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +..|.+++..+ +||||+++++++.+.+..|+||||+++++|.+.+.+. ..+++..+..++.||+.||.|||+.+   |
T Consensus        42 ~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---i  117 (321)
T cd05591          42 TMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHG---V  117 (321)
T ss_pred             HHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            45688888866 8999999999999999999999999999999988654 46899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||++........  ......||..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       118 vHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P  195 (321)
T cd05591         118 IYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPP  195 (321)
T ss_pred             eccCCCHHHeEECCCCCEEEeecccceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCC
Confidence            9999999999999999999999999875432221  22345689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-------LMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-------s~~ell~~l  231 (306)
                      |........   ...   ....     ...       ++...+.++.+++.+||+.||++|+       ++.++++|.
T Consensus       196 f~~~~~~~~---~~~---i~~~-----~~~-------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp  255 (321)
T cd05591         196 FEADNEDDL---FES---ILHD-----DVL-------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP  255 (321)
T ss_pred             CCCCCHHHH---HHH---HHcC-----CCC-------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence            976532211   110   0000     000       1112346889999999999999999       778888753


No 134
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00  E-value=2.9e-39  Score=282.45  Aligned_cols=212  Identities=27%  Similarity=0.399  Sum_probs=166.4

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|+.++.++ +||||+++++++.+.+..++||||+++++|..++.+. ..+++..+..++.||+.||.|||+.+   |
T Consensus        42 ~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~---i  117 (329)
T cd05618          42 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG---I  117 (329)
T ss_pred             HHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            46788888777 8999999999999999999999999999999888554 47999999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       118 vH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~P  195 (329)
T cd05618         118 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             eeCCCCHHHEEECCCCCEEEeeCCccccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCC
Confidence            999999999999999999999999987532211  122345789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC--cchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 021891          161 MDKNRPNGE--HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM------SEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~------~ell~~  230 (306)
                      |........  .....+........       ..    .++...+..+.+||.+||+.||++||++      .++++|
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~i~~~-------~~----~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         196 FDIVGSSDNPDQNTEDYLFQVILEK-------QI----RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             CccCCCcCCcccccHHHHHHHHhcC-------CC----CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            964222111  11111111110000       00    1122335678899999999999999984      677664


No 135
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00  E-value=6.8e-39  Score=271.49  Aligned_cols=202  Identities=25%  Similarity=0.433  Sum_probs=163.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.+++.++||||+++++++..+...++||||+++++|..++.+....+++..++.++.||+.||.|||+.+   ++
T Consensus        51 ~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iv  127 (262)
T cd05077          51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD---LV  127 (262)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC---eE
Confidence            577899999999999999999999999999999999999999988766667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCc-------EEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADYN-------AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        82 H~dlkp~Nill~~~~~-------~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~e  153 (306)
                      ||||||+||+++.++.       ++++|||++......      ....++..|+|||.+. +..++.++|||||||++||
T Consensus       128 H~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~e  201 (262)
T cd05077         128 HGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWE  201 (262)
T ss_pred             CCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHH
Confidence            9999999999987664       899999998754321      2235678899999886 5678999999999999999


Q ss_pred             HH-hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          154 ML-TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       154 ll-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |+ +|..||........   ...    ...  . ....         .....++.+||.+||+.||.+||++.+|++++
T Consensus       202 l~~~~~~p~~~~~~~~~---~~~----~~~--~-~~~~---------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         202 ICYNGEIPLKDKTLAEK---ERF----YEG--Q-CMLV---------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHhCCCCCCCCcchhHH---HHH----Hhc--C-ccCC---------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            98 47777764322111   000    000  0 0000         11245788999999999999999999999876


No 136
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=5.4e-41  Score=293.22  Aligned_cols=204  Identities=28%  Similarity=0.398  Sum_probs=176.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..+|++.|++|+|||++.|.|+|..+...||||||| -||-.|++.-..+++.+-.+..|+.+.+.||.|||+.+   .|
T Consensus        73 IlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~I  148 (948)
T KOG0577|consen   73 ILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RI  148 (948)
T ss_pred             HHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HH
Confidence            468999999999999999999999999999999999 56999999888889999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |||||+.|||+++.|.|||+|||.|....+      .+.++||+.|||||++.   .+.|+.|+|||||||+..||.-.+
T Consensus       149 HRDiKAGNILLse~g~VKLaDFGSAsi~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERk  222 (948)
T KOG0577|consen  149 HRDIKAGNILLSEPGLVKLADFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  222 (948)
T ss_pred             hhhccccceEecCCCeeeeccccchhhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcC
Confidence            999999999999999999999999977543      34688999999999986   578999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +|+...+.......+...             -.|.+.   ..+.+..++.|+..||++-|.+|||.++++.|-
T Consensus       223 PPlFnMNAMSALYHIAQN-------------esPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  223 PPLFNMNAMSALYHIAQN-------------ESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             CCccCchHHHHHHHHHhc-------------CCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence            998876554333222211             112222   335578999999999999999999999999874


No 137
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00  E-value=7.2e-39  Score=269.25  Aligned_cols=210  Identities=28%  Similarity=0.409  Sum_probs=169.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++...+..++||||+++++|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        39 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~  115 (250)
T cd05085          39 FLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CI  115 (250)
T ss_pred             HHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            678999999999999999999999999999999999999999998766667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.+||+|||++........ .......++..|+|||++.+..++.++||||||+++|+|++ |..|
T Consensus       116 H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p  194 (250)
T cd05085         116 HRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCP  194 (250)
T ss_pred             ecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999876433211 11112234567999999988889999999999999999998 8899


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |........   ....    ..      ....    ..+...+..+.+++.+||..+|++||++.++++.|.
T Consensus       195 ~~~~~~~~~---~~~~----~~------~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         195 YPGMTNQQA---REQV----EK------GYRM----SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCCHHHH---HHHH----Hc------CCCC----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            865432111   0000    00      0000    111123568999999999999999999999999875


No 138
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00  E-value=3.8e-39  Score=272.73  Aligned_cols=211  Identities=22%  Similarity=0.361  Sum_probs=171.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+.+++.++|+||+++++++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+   +
T Consensus        48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i  124 (261)
T cd05072          48 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---Y  124 (261)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            678999999999999999999999999999999999999999998653 456889999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +||||||+||+++.++.++|+|||+++....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..
T Consensus       125 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~  203 (261)
T cd05072         125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKI  203 (261)
T ss_pred             eccccchhhEEecCCCcEEECCCccceecCCCce-eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCC
Confidence            9999999999999999999999999987543221 11223345678999999988889999999999999999998 899


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ......    .      ........    ..+.++.+++.+||..+|++|||++++++.|+.
T Consensus       204 p~~~~~~~~---~~~~~~----~------~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         204 PYPGMSNSD---VMSALQ----R------GYRMPRME----NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCHHH---HHHHHH----c------CCCCCCCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            986543211   111110    0      00011111    234678999999999999999999999998864


No 139
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00  E-value=4.6e-39  Score=273.79  Aligned_cols=212  Identities=25%  Similarity=0.413  Sum_probs=166.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC------CeeEEEEEcCCCCCHHHHhhc-----CCCCCCHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED------DQRLLVYEFMPRGSLENHLFR-----RSLPLPWSIRMKIALGAAKGLA   70 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~-----~~~~l~~~~~~~~~~qi~~~l~   70 (306)
                      |.+|+++++.++|+||+++++++...      ...++||||+.+|+|.+++..     ....+++..+..++.|++.||.
T Consensus        47 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  126 (272)
T cd05075          47 FLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME  126 (272)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHH
Confidence            67899999999999999999987542      246899999999999988742     2345899999999999999999


Q ss_pred             HhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           71 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        71 ~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      |||+.+   |+||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||+
T Consensus       127 ~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i  203 (272)
T cd05075         127 YLSSKS---FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT  203 (272)
T ss_pred             HHHHCC---eeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence            999988   99999999999999999999999999987644332221222345678999999998899999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      +|||++ |..||......   .......    ....      ..    .....+..+.++|.+||+.||++|||+.+|++
T Consensus       204 l~el~~~g~~p~~~~~~~---~~~~~~~----~~~~------~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         204 MWEIATRGQTPYPGVENS---EIYDYLR----QGNR------LK----QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             HHHHHcCCCCCCCCCCHH---HHHHHHH----cCCC------CC----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999 78888653221   1111110    1100      00    11123467899999999999999999999999


Q ss_pred             HhCC
Q 021891          230 ALKP  233 (306)
Q Consensus       230 ~l~~  233 (306)
                      .|+.
T Consensus       267 ~l~~  270 (272)
T cd05075         267 ELEK  270 (272)
T ss_pred             HHHh
Confidence            8865


No 140
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00  E-value=1e-39  Score=289.52  Aligned_cols=211  Identities=23%  Similarity=0.286  Sum_probs=168.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++.++||||+++++++.+++..++||||+++|+|.+++...  .+++..+..++.||+.||.|||+.+   |+
T Consensus        90 ~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---iv  164 (370)
T cd05596          90 FWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMG---FI  164 (370)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            568999999999999999999999999999999999999999988543  5889999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC----CCCchhHHHHHHHHHHHHHhC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~elltg  157 (306)
                      ||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+.    .++.++|||||||++|||++|
T Consensus       165 HrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG  243 (370)
T cd05596         165 HRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  243 (370)
T ss_pred             ccCCCHHHEEEcCCCCEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhC
Confidence            999999999999999999999999976543221 122345789999999998643    478999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHhC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEALK  232 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~ell~~l~  232 (306)
                      ..||...........+      ......   .   ....  ....+..+.+||.+||+.+|.+  |+|+.++++|..
T Consensus       244 ~~Pf~~~~~~~~~~~i------~~~~~~---~---~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~  306 (370)
T cd05596         244 DTPFYADSLVGTYSKI------MDHKNS---L---TFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF  306 (370)
T ss_pred             CCCcCCCCHHHHHHHH------HcCCCc---C---CCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence            9999765332110000      000000   0   0000  1123578899999999999988  999999999753


No 141
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00  E-value=4.7e-39  Score=271.21  Aligned_cols=207  Identities=28%  Similarity=0.397  Sum_probs=171.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.++||||+++++++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   +
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i  122 (256)
T cd08529          46 AIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---I  122 (256)
T ss_pred             HHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            678999999999999999999999999999999999999999998764 457899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||||+||+++.++.++|+|||+++.......  ......|+..|+|||+..+..++.++|||||||++++|++|..|
T Consensus       123 ~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  200 (256)
T cd08529         123 LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHP  200 (256)
T ss_pred             ccCCCCcceEEEeCCCCEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999886543322  12334678899999999988899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |.......   ....   ...      . .    ....+...+..+.+++.+||+.+|++||++.+++++
T Consensus       201 ~~~~~~~~---~~~~---~~~------~-~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         201 FDANNQGA---LILK---IIR------G-V----FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CCCCCHHH---HHHH---HHc------C-C----CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            97543211   0100   000      0 0    011122345789999999999999999999999985


No 142
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=100.00  E-value=4.3e-40  Score=290.25  Aligned_cols=211  Identities=29%  Similarity=0.346  Sum_probs=171.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++..++|+||+++++++.+++..++||||+++++|.+++.+. ..+++..++.++.||+.||.|||+.+   ++
T Consensus        48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ii  123 (350)
T cd05573          48 VRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG---FI  123 (350)
T ss_pred             HHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999999999999765 57999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCC---------------------------cceeeecccccccccCCcchh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGD---------------------------KTHVSTRVMGTYGYAAPEYVM  134 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~  134 (306)
                      ||||||+||+++.++.+||+|||++.......                           .........||..|+|||++.
T Consensus       124 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  203 (350)
T cd05573         124 HRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR  203 (350)
T ss_pred             ccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc
Confidence            99999999999999999999999998654332                           001123356899999999999


Q ss_pred             cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcc
Q 021891          135 TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL  214 (306)
Q Consensus       135 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  214 (306)
                      +..++.++|||||||++|||++|..||...........+      ......   ...+.. .    ..+..+.+||.+||
T Consensus       204 ~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i------~~~~~~---~~~p~~-~----~~~~~~~~li~~ll  269 (350)
T cd05573         204 GTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKI------INWKES---LRFPPD-P----PVSPEAIDLICRLL  269 (350)
T ss_pred             CCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHH------hccCCc---ccCCCC-C----CCCHHHHHHHHHHc
Confidence            999999999999999999999999999765422111000      000000   000000 0    13578899999999


Q ss_pred             cCCCCCCCC-HHHHHHHh
Q 021891          215 SRDPKARPL-MSEVVEAL  231 (306)
Q Consensus       215 ~~~p~~Rps-~~ell~~l  231 (306)
                      . ||.+||+ +.++++|.
T Consensus       270 ~-dp~~R~~s~~~ll~hp  286 (350)
T cd05573         270 C-DPEDRLGSFEEIKSHP  286 (350)
T ss_pred             c-ChhhcCCCHHHHhcCC
Confidence            7 9999999 99999874


No 143
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00  E-value=3.9e-39  Score=275.97  Aligned_cols=226  Identities=31%  Similarity=0.452  Sum_probs=170.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |.+|+++|+.++||||+++++++...  ...++||||+++++|.+++...  .+++..++.++.|++.||.|||+.+   
T Consensus        53 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~---  127 (283)
T cd05080          53 WKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQH---  127 (283)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            67899999999999999999988764  3678999999999999998653  5899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce-eeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++||||||+||+++.++.++|+|||+++......... ......++..|+|||.+.+..++.++||||||+++|+|++|.
T Consensus       128 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~  207 (283)
T cd05080         128 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC  207 (283)
T ss_pred             eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998764432211 112233566799999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .||......-. .......... ....+....+.......+...+..+.+++.+||+.+|++|||++++++.|+.+
T Consensus       208 ~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         208 DSKQSPPKKFE-EMIGPKQGQM-TVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCCCCCcchhh-hhhccccccc-chhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            99865332110 0000000000 00000111111111111223457899999999999999999999999988754


No 144
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00  E-value=6.7e-40  Score=258.77  Aligned_cols=217  Identities=25%  Similarity=0.352  Sum_probs=170.8

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      ++|++..++++||||++++++...+.     ..||++.|...|+|.+.+...   +..+++.++..|+.+|+.||++||+
T Consensus        66 ~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~  145 (302)
T KOG2345|consen   66 LREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE  145 (302)
T ss_pred             HHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc
Confidence            68999999999999999999876554     489999999999999998653   4469999999999999999999999


Q ss_pred             CCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceee-------ecccccccccCCcchhc---CCCCchhHH
Q 021891           75 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVS-------TRVMGTYGYAAPEYVMT---GHLTSRSDV  144 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~---~~~~~~~Di  144 (306)
                      .. .++.||||||.||++++.+.++|.|||.++...-.......       .....|..|+|||.+..   ...++++||
T Consensus       146 ~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDI  224 (302)
T KOG2345|consen  146 KE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDI  224 (302)
T ss_pred             cC-CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccch
Confidence            87 57999999999999999999999999999864332111110       11345889999999863   457899999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          145 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       145 wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      |||||++|.|+.|..||...-..+..-.              ....++.+...-....++.+.+||++||+.||.+||++
T Consensus       225 WSLGCtLYa~mf~~sPfe~~~~~GgSla--------------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i  290 (302)
T KOG2345|consen  225 WSLGCTLYAMMFGESPFERIYQQGGSLA--------------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTI  290 (302)
T ss_pred             hhhhHHHHHHHHcCCcchHHhhcCCeEE--------------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCH
Confidence            9999999999999999975433221100              01111122111122357899999999999999999999


Q ss_pred             HHHHHHhCCC
Q 021891          225 SEVVEALKPL  234 (306)
Q Consensus       225 ~ell~~l~~~  234 (306)
                      .+++..+..+
T Consensus       291 ~~ll~~~d~L  300 (302)
T KOG2345|consen  291 PELLSKLDDL  300 (302)
T ss_pred             HHHHHHHHhh
Confidence            9999988654


No 145
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00  E-value=5.3e-39  Score=285.05  Aligned_cols=221  Identities=23%  Similarity=0.311  Sum_probs=172.0

Q ss_pred             HHHHHHHhcCC-C-----CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            3 QAEVNFLGDLV-H-----LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         3 ~~E~~il~~l~-H-----~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.|+.||..|+ |     -|||+++++|...+++|||+|++ +.+|.++++.+. ..++...+..++.||+.||.+||+.
T Consensus       230 ~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l  308 (586)
T KOG0667|consen  230 QIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL  308 (586)
T ss_pred             HHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            57999999996 4     39999999999999999999999 569999998763 5699999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcCC--CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDAD--YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      +   |||+||||+|||+...  ..+||+|||.++......     ...+.+..|+|||++.|.+|+.+.||||||||++|
T Consensus       309 ~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v-----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAE  380 (586)
T KOG0667|consen  309 G---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV-----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAE  380 (586)
T ss_pred             C---eeeccCChhheeeccCCcCceeEEecccccccCCcc-----eeeeeccccccchhhccCCCCCccceeehhhhHHh
Confidence            8   9999999999999653  469999999999754332     24567889999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhh--------hhccccccc---------------------------------cccCC
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARP--------HLGERRRFY---------------------------------RLIDP  192 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~---------------------------------~~~~~  192 (306)
                      |++|.+.|.+.+..+....+.-...        .......+.                                 ....|
T Consensus       381 L~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P  460 (586)
T KOG0667|consen  381 LFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGP  460 (586)
T ss_pred             HhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCC
Confidence            9999999988766554332211110        000000000                                 00001


Q ss_pred             ----ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          193 ----RLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       193 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                          .+...........+.+++++||.+||.+|+|..++++|..
T Consensus       461 ~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpf  504 (586)
T KOG0667|consen  461 PGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPF  504 (586)
T ss_pred             CCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcc
Confidence                0011122234567899999999999999999999999864


No 146
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=2.5e-39  Score=280.35  Aligned_cols=213  Identities=27%  Similarity=0.407  Sum_probs=169.5

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      +.+|+++++.+ +|+||+++++++...+..++||||+++++|.+++..+.               ..+++..+..++.|+
T Consensus        70 ~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  149 (307)
T cd05098          70 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQV  149 (307)
T ss_pred             HHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHH
Confidence            56799999999 79999999999999999999999999999999996532               247889999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||+|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||
T Consensus       150 ~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  226 (307)
T cd05098         150 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  226 (307)
T ss_pred             HHHHHHHHHCC---cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHH
Confidence            99999999988   999999999999999999999999998765432211112222345689999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|+|++ |..||.......   ...    .....          .....+...+.++.+|+.+||..+|.+|||+
T Consensus       227 slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  289 (307)
T cd05098         227 SFGVLLWEIFTLGGSPYPGVPVEE---LFK----LLKEG----------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF  289 (307)
T ss_pred             HHHHHHHHHHcCCCCCCCcCCHHH---HHH----HHHcC----------CCCCCCCcCCHHHHHHHHHHcccChhhCcCH
Confidence            99999999998 888886432211   110    00000          0001122335788999999999999999999


Q ss_pred             HHHHHHhCCC
Q 021891          225 SEVVEALKPL  234 (306)
Q Consensus       225 ~ell~~l~~~  234 (306)
                      .++++.|+.+
T Consensus       290 ~evl~~l~~~  299 (307)
T cd05098         290 KQLVEDLDRI  299 (307)
T ss_pred             HHHHHHHHHH
Confidence            9999998754


No 147
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00  E-value=4.5e-39  Score=274.98  Aligned_cols=213  Identities=21%  Similarity=0.333  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++|+||+++++++.. ...++++||+++|+|.+++..+...+++..+..++.|++.||.|||+.+   ++
T Consensus        56 ~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ii  131 (279)
T cd05109          56 ILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LV  131 (279)
T ss_pred             HHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            6789999999999999999999875 4578999999999999999776667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus       132 H~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  211 (279)
T cd05109         132 HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999987654332222222334678999999988899999999999999999998 8888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      |.......   ...+..    ....      ..    .+...+.++.+++.+||+.||++||++.++++.|+.+.
T Consensus       212 ~~~~~~~~---~~~~~~----~~~~------~~----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         212 YDGIPARE---IPDLLE----KGER------LP----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             CCCCCHHH---HHHHHH----CCCc------CC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            86532211   111110    0000      00    11123567899999999999999999999999876543


No 148
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=9.8e-40  Score=290.31  Aligned_cols=203  Identities=26%  Similarity=0.374  Sum_probs=168.9

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..|.+|+... +||.++.++.+|++++++|+||||+.||++...  .+...|++..+..++..|+.||+|||+++   ||
T Consensus       416 ~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH~~~---II  490 (694)
T KOG0694|consen  416 MCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLHENG---II  490 (694)
T ss_pred             HHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHHhcC---ce
Confidence            4677777777 699999999999999999999999999994332  34457999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||||.+|||+|.+|.+||+|||+++..-..+  ..+.+++||+.|||||++.+..|+.++|.|||||+|||||.|+.||
T Consensus       491 YRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF  568 (694)
T KOG0694|consen  491 YRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF  568 (694)
T ss_pred             eeecchhheEEcccCcEEecccccccccCCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999998744222  2456799999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~ell~~  230 (306)
                      .+.+..+...-+..                .  ...++...+.+..++++++|.+||++|..+     .+|.+|
T Consensus       569 ~gddEee~FdsI~~----------------d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h  624 (694)
T KOG0694|consen  569 PGDDEEEVFDSIVN----------------D--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH  624 (694)
T ss_pred             CCCCHHHHHHHHhc----------------C--CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence            98765433222210                0  112445567899999999999999999854     555543


No 149
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=100.00  E-value=7.5e-39  Score=271.96  Aligned_cols=213  Identities=24%  Similarity=0.404  Sum_probs=171.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++.+.+..++||||+++++|.+++......+++..+..++.|++.||+|||+.+   ++
T Consensus        53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~  129 (268)
T cd05063          53 FLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YV  129 (268)
T ss_pred             HHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999999999999776667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceee-ecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVS-TRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      |+||||+||+++.++.+||+|||++............ .....+..|+|||++.+..++.++|||||||++|||++ |..
T Consensus       130 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~  209 (268)
T cd05063         130 HRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGER  209 (268)
T ss_pred             ccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999765432221111 11223457999999988889999999999999999997 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ||.......   .....    ....     ..+     .....+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       210 p~~~~~~~~---~~~~i----~~~~-----~~~-----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         210 PYWDMSNHE---VMKAI----NDGF-----RLP-----APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCCcCCHHH---HHHHH----hcCC-----CCC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            986543211   11100    0000     000     1112356789999999999999999999999998653


No 150
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00  E-value=4.3e-39  Score=273.96  Aligned_cols=213  Identities=27%  Similarity=0.439  Sum_probs=169.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCe------eEEEEEcCCCCCHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQ------RLLVYEFMPRGSLENHLFRR-----SLPLPWSIRMKIALGAAKGLA   70 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~------~~lv~e~~~~~sL~~~l~~~-----~~~l~~~~~~~~~~qi~~~l~   70 (306)
                      |.+|+++++.++|+||+++++++...+.      .++||||+++++|..++...     ...+++..+..++.|++.||.
T Consensus        48 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~  127 (273)
T cd05035          48 FLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME  127 (273)
T ss_pred             HHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHH
Confidence            6789999999999999999998876554      78999999999999988432     236899999999999999999


Q ss_pred             HhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           71 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        71 ~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      |||+.+   ++||||||+||++++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||+
T Consensus       128 ~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i  204 (273)
T cd05035         128 YLSNRN---FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT  204 (273)
T ss_pred             HHHhCC---eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHH
Confidence            999988   99999999999999999999999999987544332222222334678999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      +|||++ |..||......   .......    ...      ...    .+...+..+.+++.+||+.||++|||+.++++
T Consensus       205 l~el~~~g~~p~~~~~~~---~~~~~~~----~~~------~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~  267 (273)
T cd05035         205 MWEIATRGQTPYPGVENH---EIYDYLR----HGN------RLK----QPEDCLDELYDLMYSCWRADPKDRPTFTKLRE  267 (273)
T ss_pred             HHHHHhCCCCCCCCCCHH---HHHHHHH----cCC------CCC----CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999 88888654321   1111111    000      011    11233568999999999999999999999999


Q ss_pred             HhCCC
Q 021891          230 ALKPL  234 (306)
Q Consensus       230 ~l~~~  234 (306)
                      +|+.+
T Consensus       268 ~l~~~  272 (273)
T cd05035         268 VLENI  272 (273)
T ss_pred             HHHhh
Confidence            98754


No 151
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00  E-value=5.6e-39  Score=281.43  Aligned_cols=214  Identities=29%  Similarity=0.448  Sum_probs=168.6

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeC-CeeEEEEEcCCCCCHHHHhhcCC-----------------------------
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIED-DQRLLVYEFMPRGSLENHLFRRS-----------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~~~-----------------------------   50 (306)
                      +.+|+++++++ +|+||++++++|... ..++++|||+++++|.+++....                             
T Consensus        57 ~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (337)
T cd05054          57 LMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSV  136 (337)
T ss_pred             HHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccC
Confidence            46799999999 899999999988654 56789999999999999885321                             


Q ss_pred             -------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEE
Q 021891           51 -------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAK   99 (306)
Q Consensus        51 -------------------------------~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~k   99 (306)
                                                     ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vk  213 (337)
T cd05054         137 SSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVK  213 (337)
T ss_pred             CccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEE
Confidence                                           25789999999999999999999988   99999999999999999999


Q ss_pred             EeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhh
Q 021891          100 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARP  178 (306)
Q Consensus       100 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~  178 (306)
                      |+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||........  ...    
T Consensus       214 L~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~----  287 (337)
T cd05054         214 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCR----  287 (337)
T ss_pred             EeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHH----
Confidence            999999987543332222233445678999999999999999999999999999998 9999875432211  000    


Q ss_pred             hhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          179 HLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .......      .    ..+...+.++.+++.+||+.+|++||++.||+++|+.+
T Consensus       288 ~~~~~~~------~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         288 RLKEGTR------M----RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             HHhccCC------C----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0001000      0    01112346789999999999999999999999998753


No 152
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=5.8e-39  Score=278.94  Aligned_cols=214  Identities=25%  Similarity=0.407  Sum_probs=169.6

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      +.+|+++++++ +||||+++++++...+..++||||+++|+|.+++....               ..+++..+..++.|+
T Consensus        64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  143 (314)
T cd05099          64 LISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQV  143 (314)
T ss_pred             HHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHH
Confidence            57899999999 69999999999999999999999999999999986532               348889999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||
T Consensus       144 ~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  220 (314)
T cd05099         144 ARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVW  220 (314)
T ss_pred             HHHHHHHHHCC---eeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhh
Confidence            99999999988   999999999999999999999999999865432221111222344679999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|+|++ |..||........   .....    ....      .    ..+...+.++.+++.+||..+|++|||+
T Consensus       221 slG~~l~el~~~g~~p~~~~~~~~~---~~~~~----~~~~------~----~~~~~~~~~l~~li~~cl~~~p~~Rps~  283 (314)
T cd05099         221 SFGILMWEIFTLGGSPYPGIPVEEL---FKLLR----EGHR------M----DKPSNCTHELYMLMRECWHAVPTQRPTF  283 (314)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH----cCCC------C----CCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence            99999999999 8888865432111   11100    0000      0    1112234688899999999999999999


Q ss_pred             HHHHHHhCCCC
Q 021891          225 SEVVEALKPLP  235 (306)
Q Consensus       225 ~ell~~l~~~~  235 (306)
                      .++++.|+.+.
T Consensus       284 ~~ll~~l~~~~  294 (314)
T cd05099         284 KQLVEALDKVL  294 (314)
T ss_pred             HHHHHHHHHHH
Confidence            99999887543


No 153
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00  E-value=4.1e-39  Score=277.73  Aligned_cols=212  Identities=24%  Similarity=0.349  Sum_probs=168.2

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      |.+|+++++++ +||||+++++++...+..++||||+++++|.+++.+..               ..+++..++.++.|+
T Consensus        49 ~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  128 (297)
T cd05089          49 FAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDV  128 (297)
T ss_pred             HHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHH
Confidence            67899999999 79999999999999999999999999999999986432               248889999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||+|||+.+   ++||||||+||+++.++.+||+|||++.......   .......+..|+|||++.+..++.++|||
T Consensus       129 ~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  202 (297)
T cd05089         129 ATGMQYLSEKQ---FIHRDLAARNVLVGENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVW  202 (297)
T ss_pred             HHHHHHHHHCC---cccCcCCcceEEECCCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHH
Confidence            99999999988   9999999999999999999999999986432111   11111234579999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||++ |..||........   ..   . ..      ......    .+...+..+.+|+.+||+.+|.+|||+
T Consensus       203 SlG~il~el~t~g~~pf~~~~~~~~---~~---~-~~------~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~  265 (297)
T cd05089         203 SFGVLLWEIVSLGGTPYCGMTCAEL---YE---K-LP------QGYRME----KPRNCDDEVYELMRQCWRDRPYERPPF  265 (297)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHH---HH---H-Hh------cCCCCC----CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            99999999997 9999965432211   00   0 00      000111    112234678999999999999999999


Q ss_pred             HHHHHHhCCCCC
Q 021891          225 SEVVEALKPLPN  236 (306)
Q Consensus       225 ~ell~~l~~~~~  236 (306)
                      .++++.|+.+..
T Consensus       266 ~~i~~~l~~~~~  277 (297)
T cd05089         266 AQISVQLSRMLE  277 (297)
T ss_pred             HHHHHHHHHHHH
Confidence            999998875544


No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00  E-value=2.6e-39  Score=292.67  Aligned_cols=223  Identities=22%  Similarity=0.327  Sum_probs=163.2

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeC--------CeeEEEEEcCCCCCHHHHhh---cCCCCCCHHHHHHHHHHHHHHHHH
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIED--------DQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~--------~~~~lv~e~~~~~sL~~~l~---~~~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      .+|+.+|+.++||||+++++++...        ..+++||||+++ +|.+++.   .....+++..++.++.||+.||.|
T Consensus       107 ~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~y  185 (440)
T PTZ00036        107 NRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAY  185 (440)
T ss_pred             HHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999987542        246799999975 7777664   234579999999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCC-cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGV  149 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~  149 (306)
                      ||+.+   |+||||||+|||++.++ .+||+|||+++.......   .....||+.|+|||++.+. .|+.++|||||||
T Consensus       186 LH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGv  259 (440)
T PTZ00036        186 IHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGC  259 (440)
T ss_pred             HHHCC---EecCCcCHHHEEEcCCCCceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHH
Confidence            99998   99999999999998664 799999999987543322   2235679999999998754 6899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcchHHhhhhh--hcc----cccc-----ccccCCccCCCCCHHHHHHHHHHHHHcccCCC
Q 021891          150 VLLEMLTGRRSMDKNRPNGEHNLVEWARPH--LGE----RRRF-----YRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  218 (306)
Q Consensus       150 il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (306)
                      ++|||++|.+||.+.........+......  ...    ...+     .......+...++...+.++.+||.+||++||
T Consensus       260 il~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP  339 (440)
T PTZ00036        260 IIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEP  339 (440)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCCh
Confidence            999999999999765432211111100000  000    0000     00000011111222345789999999999999


Q ss_pred             CCCCCHHHHHHHhC
Q 021891          219 KARPLMSEVVEALK  232 (306)
Q Consensus       219 ~~Rps~~ell~~l~  232 (306)
                      .+|||+.|+++|..
T Consensus       340 ~~R~ta~e~l~hp~  353 (440)
T PTZ00036        340 LKRLNPIEALADPF  353 (440)
T ss_pred             hHCcCHHHHhCChh
Confidence            99999999998743


No 155
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00  E-value=5.7e-39  Score=271.08  Aligned_cols=212  Identities=28%  Similarity=0.451  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++. .+..++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+   ++
T Consensus        43 ~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~---i~  117 (257)
T cd05060          43 FLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKH---FV  117 (257)
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcC---ee
Confidence            678999999999999999999876 456899999999999999996654 7899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      |+||||+||+++.++.+||+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|+|++ |..
T Consensus       118 H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~  197 (257)
T cd05060         118 HRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAK  197 (257)
T ss_pred             ccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999987543322211 111223467999999988889999999999999999998 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      ||......   ........    ..   ..   .    .+...+..+.++|.+||..+|++||++.++++.|+...
T Consensus       198 p~~~~~~~---~~~~~~~~----~~---~~---~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         198 PYGEMKGA---EVIAMLES----GE---RL---P----RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CcccCCHH---HHHHHHHc----CC---cC---C----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            98654321   11111110    00   00   0    11123468899999999999999999999999987653


No 156
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00  E-value=1.1e-38  Score=268.25  Aligned_cols=211  Identities=28%  Similarity=0.438  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++.+.+..++||||+++++|.+++......+++..+..++.+++.||.|||+++   ++
T Consensus        39 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~  115 (251)
T cd05041          39 FLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CI  115 (251)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---Ee
Confidence            678999999999999999999999999999999999999999999766667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||||+||+++.++.+||+|||++................++..|+|||.+.+..++.++||||||+++|+|++ |..|
T Consensus       116 h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p  195 (251)
T cd05041         116 HRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTP  195 (251)
T ss_pred             hhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCC
Confidence            999999999999999999999999976542211111112233567999999988889999999999999999999 7888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |...........+       ....   .       ...+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus       196 ~~~~~~~~~~~~~-------~~~~---~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         196 YPGMSNQQTRERI-------ESGY---R-------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CccCCHHHHHHHH-------hcCC---C-------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            8654321111110       0000   0       0112233568999999999999999999999999875


No 157
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00  E-value=1e-38  Score=272.07  Aligned_cols=203  Identities=24%  Similarity=0.439  Sum_probs=163.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.++++++||||+++++++.+....++||||+++++|..++.+....+++..+..++.||+.||+|||+.+   |+
T Consensus        63 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ii  139 (274)
T cd05076          63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN---LV  139 (274)
T ss_pred             HHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC---cc
Confidence            678899999999999999999999999999999999999999998766667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCC-------cEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADY-------NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        82 H~dlkp~Nill~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~e  153 (306)
                      ||||||+||+++..+       .+|++|||++......      ....++..|+|||.+.+ ..++.++|||||||++||
T Consensus       140 H~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~e  213 (274)
T cd05076         140 HGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLE  213 (274)
T ss_pred             CCCCCcccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHH
Confidence            999999999997643       4899999988653221      12346778999998875 568999999999999999


Q ss_pred             HH-hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          154 ML-TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       154 ll-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |+ +|..||..........   ..    ....        ....    .....+.++|.+||+.+|++|||+.+++++|.
T Consensus       214 l~~~g~~p~~~~~~~~~~~---~~----~~~~--------~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         214 ICFDGEVPLKERTPSEKER---FY----EKKH--------RLPE----PSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHhCCCCCccccChHHHHH---HH----Hhcc--------CCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            85 6888887543322111   00    0000        0001    11347889999999999999999999999873


No 158
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=100.00  E-value=2.5e-38  Score=272.60  Aligned_cols=218  Identities=26%  Similarity=0.451  Sum_probs=168.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-----------CCCCHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-----------LPLPWSIRMKIALGAAKGLA   70 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----------~~l~~~~~~~~~~qi~~~l~   70 (306)
                      |.+|++++++++|+||+++++++...+..++||||+.+++|.+++....           ..+++..++.++.|++.||.
T Consensus        64 ~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~  143 (295)
T cd05097          64 FLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMK  143 (295)
T ss_pred             HHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999885432           23688899999999999999


Q ss_pred             HhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           71 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        71 ~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      |||+.+   ++|+||||+||+++.++.+||+|||++................++..|+|||++.+..++.++|||||||+
T Consensus       144 ~lH~~~---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~  220 (295)
T cd05097         144 YLASLN---FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVT  220 (295)
T ss_pred             HHHhcC---eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHH
Confidence            999988   99999999999999999999999999976543332222233345678999999988889999999999999


Q ss_pred             HHHHHh--CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          151 LLEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       151 l~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      +|+|++  +..||.......   .+............  ... .    ..+...+..+.+|+.+||+.||++|||+.+|+
T Consensus       221 l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~--~~~-~----~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~  290 (295)
T cd05097         221 LWEMFTLCKEQPYSLLSDEQ---VIENTGEFFRNQGR--QIY-L----SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH  290 (295)
T ss_pred             HHHHHHcCCCCCCcccChHH---HHHHHHHhhhhccc--ccc-C----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            999998  556766533211   11111100100000  000 0    00112346899999999999999999999999


Q ss_pred             HHhC
Q 021891          229 EALK  232 (306)
Q Consensus       229 ~~l~  232 (306)
                      +.|+
T Consensus       291 ~~l~  294 (295)
T cd05097         291 HFLR  294 (295)
T ss_pred             HHHh
Confidence            9885


No 159
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=100.00  E-value=1.1e-38  Score=269.00  Aligned_cols=210  Identities=24%  Similarity=0.348  Sum_probs=173.1

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +|.+|++++++++|+||+++++++.+....++++||+.+++|.+++......+++..++.++.|++.||.|||+.+   +
T Consensus        44 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i  120 (256)
T cd06612          44 EIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---K  120 (256)
T ss_pred             HHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            3789999999999999999999999999999999999999999999766678999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||+|+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++||||||+++|+|++|..|
T Consensus       121 ~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p  198 (256)
T cd06612         121 IHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPP  198 (256)
T ss_pred             ccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999987544321  22334578899999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |............       .      ....+  ....+...+..+.++|.+||+.||++|||+.+++++
T Consensus       199 ~~~~~~~~~~~~~-------~------~~~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         199 YSDIHPMRAIFMI-------P------NKPPP--TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             CCCcchhhhhhhh-------c------cCCCC--CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            9754332111000       0      00000  001122345688999999999999999999999985


No 160
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00  E-value=6.2e-39  Score=275.37  Aligned_cols=211  Identities=27%  Similarity=0.467  Sum_probs=168.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------------CCCCHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------------LPLPWSIRMK   60 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------------~~l~~~~~~~   60 (306)
                      |.+|++++++++||||+++++++.+++..++||||+++++|.+++....                     ..+++..++.
T Consensus        55 ~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  134 (288)
T cd05050          55 FQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLC  134 (288)
T ss_pred             HHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHH
Confidence            6789999999999999999999999999999999999999999986421                     2478889999


Q ss_pred             HHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCc
Q 021891           61 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS  140 (306)
Q Consensus        61 ~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  140 (306)
                      ++.|++.||.|||+.+   ++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.
T Consensus       135 ~~~~i~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  211 (288)
T cd05050         135 IAKQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTT  211 (288)
T ss_pred             HHHHHHHHHHHHHhCC---eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCc
Confidence            9999999999999988   9999999999999999999999999987643322211122233466799999998889999


Q ss_pred             hhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCC
Q 021891          141 RSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK  219 (306)
Q Consensus       141 ~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  219 (306)
                      ++|||||||++|+|++ |..||.......   .....    ....    ..      ..+...+..+.+|+.+||+.+|.
T Consensus       212 ~~Dv~slG~il~el~~~~~~p~~~~~~~~---~~~~~----~~~~----~~------~~~~~~~~~l~~li~~~l~~~p~  274 (288)
T cd05050         212 ESDVWAYGVVLWEIFSYGMQPYYGMAHEE---VIYYV----RDGN----VL------SCPDNCPLELYNLMRLCWSKLPS  274 (288)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----hcCC----CC------CCCCCCCHHHHHHHHHHcccCcc
Confidence            9999999999999997 778886543211   11100    0000    00      01112356889999999999999


Q ss_pred             CCCCHHHHHHHhC
Q 021891          220 ARPLMSEVVEALK  232 (306)
Q Consensus       220 ~Rps~~ell~~l~  232 (306)
                      +|||+.|+++.|+
T Consensus       275 ~Rpt~~el~~~l~  287 (288)
T cd05050         275 DRPSFASINRILQ  287 (288)
T ss_pred             cCCCHHHHHHHhh
Confidence            9999999999886


No 161
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00  E-value=5.5e-39  Score=280.35  Aligned_cols=212  Identities=28%  Similarity=0.340  Sum_probs=167.1

Q ss_pred             HHHH-HHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            4 AEVN-FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         4 ~E~~-il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      +|.. +++.++||||+++++++..++..++||||+++++|..++.+. ..+++..+..++.||+.||.|||+.+   |+|
T Consensus        44 ~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~g---ivH  119 (325)
T cd05604          44 AERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSIN---IVY  119 (325)
T ss_pred             HHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eee
Confidence            4443 577899999999999999999999999999999999888544 47899999999999999999999988   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      |||||+|||++.++.+||+|||+++......  .......||..|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       120 ~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~  197 (325)
T cd05604         120 RDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFY  197 (325)
T ss_pred             cCCCHHHeEECCCCCEEEeecCCcccCCCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCC
Confidence            9999999999999999999999987532211  12234578999999999999999999999999999999999999997


Q ss_pred             CCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCCCCC
Q 021891          163 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD  239 (306)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~  239 (306)
                      .......   .   .......    ..+.        ...+..+.+++.+||+.+|.+||++.+.++.+...+.+..
T Consensus       198 ~~~~~~~---~---~~~~~~~----~~~~--------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         198 CRDVAEM---Y---DNILHKP----LVLR--------PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             CCCHHHH---H---HHHHcCC----ccCC--------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence            6432211   0   0000000    0011        1234678899999999999999988755555555555443


No 162
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00  E-value=6.3e-39  Score=272.84  Aligned_cols=210  Identities=25%  Similarity=0.385  Sum_probs=166.6

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      |.+|+++++++ +||||+++++++...+..++||||+++++|.+++....               ..+++..+..++.|+
T Consensus        42 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i  121 (270)
T cd05047          42 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV  121 (270)
T ss_pred             HHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHH
Confidence            56899999999 89999999999999999999999999999999986432               247899999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||+|||+.+   ++||||||+||+++.++.+||+|||++.......   .......+..|+|||++....++.++|||
T Consensus       122 ~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~  195 (270)
T cd05047         122 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVW  195 (270)
T ss_pred             HHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCCccccchhh---hccCCCCccccCChHHHccCCCCchhhHH
Confidence            99999999988   9999999999999999999999999986422111   11112235679999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||++ |..||........   ...    ....      ...    ..+...+..+.+|+.+||..||.+|||+
T Consensus       196 slG~il~el~~~g~~pf~~~~~~~~---~~~----~~~~------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~  258 (270)
T cd05047         196 SYGVLLWEIVSLGGTPYCGMTCAEL---YEK----LPQG------YRL----EKPLNCDDEVYDLMRQCWREKPYERPSF  258 (270)
T ss_pred             HHHHHHHHHHcCCCCCccccCHHHH---HHH----HhCC------CCC----CCCCcCCHHHHHHHHHHcccChhhCCCH
Confidence            99999999997 9999865322111   100    0000      000    1111234678999999999999999999


Q ss_pred             HHHHHHhCCC
Q 021891          225 SEVVEALKPL  234 (306)
Q Consensus       225 ~ell~~l~~~  234 (306)
                      .++++.|+.+
T Consensus       259 ~~il~~l~~~  268 (270)
T cd05047         259 AQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHHh
Confidence            9999998654


No 163
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=100.00  E-value=5.8e-39  Score=284.53  Aligned_cols=211  Identities=23%  Similarity=0.268  Sum_probs=166.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++||||+++++++.+++..|+|||||++|+|.+++...  .+++..+..++.||+.||+|||+.+   |+
T Consensus        90 ~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~---Iv  164 (370)
T cd05621          90 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMG---LI  164 (370)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            568999999999999999999999999999999999999999998543  5899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC----CCCchhHHHHHHHHHHHHHhC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~elltg  157 (306)
                      ||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+.    .++.++|||||||++|+|++|
T Consensus       165 HrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G  243 (370)
T cd05621         165 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG  243 (370)
T ss_pred             ecCCCHHHEEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhC
Confidence            999999999999999999999999987543221 122345799999999998754    378899999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHhC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEALK  232 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~ell~~l~  232 (306)
                      ..||...........      .......      ....  .....+..+.+++.+||+.++.+  |+++.|+++|..
T Consensus       244 ~~Pf~~~~~~~~~~~------i~~~~~~------~~~p--~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~  306 (370)
T cd05621         244 DTPFYADSLVGTYSK------IMDHKNS------LNFP--EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF  306 (370)
T ss_pred             CCCCCCCCHHHHHHH------HHhCCcc------cCCC--CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence            999976532111000      0000000      0000  01123567889999999855544  889999999743


No 164
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00  E-value=7.8e-39  Score=270.14  Aligned_cols=211  Identities=27%  Similarity=0.410  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|++++++++|+||+++++++.. ...++||||+++++|.+.+.+.. ..+++..++.++.|++.||.|||+.+   +
T Consensus        43 ~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i  118 (257)
T cd05040          43 FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---F  118 (257)
T ss_pred             HHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            6789999999999999999999988 88999999999999999997654 57899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce-eeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      +|+||||+||+++.++.+||+|||++.......... ......++..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~  198 (257)
T cd05040         119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGE  198 (257)
T ss_pred             cccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCC
Confidence            999999999999999999999999998765432211 1223456788999999988899999999999999999998 99


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .||........   ......   ...   .       ...+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       199 ~p~~~~~~~~~---~~~~~~---~~~---~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         199 EPWAGLSGSQI---LKKIDK---EGE---R-------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCCCCCCHHHH---HHHHHh---cCC---c-------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            99865432211   111000   000   0       0011123568999999999999999999999999874


No 165
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=100.00  E-value=6.6e-39  Score=270.93  Aligned_cols=203  Identities=22%  Similarity=0.395  Sum_probs=163.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.+++.++||||+++++++..++..++||||+++|+|.+++..+...+++..+..++.||+.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ii  122 (258)
T cd05078          46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG---LT  122 (258)
T ss_pred             HHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999999999999776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCc--------EEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADYN--------AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        82 H~dlkp~Nill~~~~~--------~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  152 (306)
                      ||||||+||+++.++.        ++++|||++......      ....++..|+|||++.+ ..++.++|||||||++|
T Consensus       123 H~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~  196 (258)
T cd05078         123 HGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLW  196 (258)
T ss_pred             cCCCccceEEEecccccccCCCceEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHH
Confidence            9999999999987664        699999998654321      22457888999999976 45799999999999999


Q ss_pred             HHHhCC-CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLTGR-RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +|++|. .||........   ..    ......        .    ++.....++.+|+.+||+.||++|||++++++.|
T Consensus       197 ~l~~g~~~~~~~~~~~~~---~~----~~~~~~--------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         197 EIFSGGDKPLSALDSQKK---LQ----FYEDRH--------Q----LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHcCCCCChhhccHHHH---HH----HHHccc--------c----CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            999985 55543221110   00    000000        0    1111235789999999999999999999999976


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      +
T Consensus       258 ~  258 (258)
T cd05078         258 N  258 (258)
T ss_pred             C
Confidence            3


No 166
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00  E-value=1.6e-38  Score=273.96  Aligned_cols=218  Identities=25%  Similarity=0.454  Sum_probs=169.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----------LPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      |.+|+++++.++|+||+++++++...+..++||||+++++|.+++....          ..+++..+..++.|++.||.|
T Consensus        66 ~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~  145 (296)
T cd05095          66 FLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKY  145 (296)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999986532          246778999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  151 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  151 (306)
                      ||+.+   ++|+||||+||+++.++.++|+|||+++...............++..|+|||...+..++.++|||||||++
T Consensus       146 lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l  222 (296)
T cd05095         146 LSSLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL  222 (296)
T ss_pred             HHHCC---eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH
Confidence            99988   999999999999999999999999999865433222222223446789999998888899999999999999


Q ss_pred             HHHHh--CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          152 LEMLT--GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       152 ~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      |||++  |..||........   +............  ....+     .+..++..+.+|+.+||+.||++||++.+|++
T Consensus       223 ~el~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         223 WEILTLCKEQPYSQLSDEQV---IENTGEFFRDQGR--QVYLP-----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHhCCCCCccccChHHH---HHHHHHHHhhccc--cccCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99998  6678765433211   1111000000000  00000     01123468899999999999999999999999


Q ss_pred             HhC
Q 021891          230 ALK  232 (306)
Q Consensus       230 ~l~  232 (306)
                      .|+
T Consensus       293 ~l~  295 (296)
T cd05095         293 TLL  295 (296)
T ss_pred             HHh
Confidence            875


No 167
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00  E-value=1.2e-38  Score=270.46  Aligned_cols=214  Identities=23%  Similarity=0.330  Sum_probs=172.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      |.+|+++++.++||||+++++++.+.+..++|+||+++++|.+++..   ....+++..++.++.|++.||.|||+.+  
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--  126 (267)
T cd08228          49 CVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--  126 (267)
T ss_pred             HHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--
Confidence            67899999999999999999999999999999999999999988743   3345899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ++|+||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++||||||+++|+|++|.
T Consensus       127 -i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~  203 (267)
T cd08228         127 -VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             -eeCCCCCHHHEEEcCCCCEEECccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCC
Confidence             99999999999999999999999999886543221  122346788999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .||.......    ..+.... .      ....+.   ......+..+.+++.+||+.+|++||++.++++.++.+
T Consensus       204 ~p~~~~~~~~----~~~~~~~-~------~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         204 SPFYGDKMNL----FSLCQKI-E------QCDYPP---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCCccccccH----HHHHHHH-h------cCCCCC---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            9986532211    1111100 0      000111   11223457899999999999999999999999998765


No 168
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00  E-value=1.4e-38  Score=276.90  Aligned_cols=225  Identities=21%  Similarity=0.303  Sum_probs=161.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe--CCeeEEEEEcCCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~--------~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      +.+|+++|++++||||+++++++..  +...++||||+. ++|.+++...        ...+++..+..++.||+.||.|
T Consensus        45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~  123 (317)
T cd07868          45 ACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY  123 (317)
T ss_pred             HHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999864  456889999995 5888877432        2358999999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEE----cCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhc-CCCCchhHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILL----DADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVY  145 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  145 (306)
                      ||+.+   |+||||||+|||+    +.++.+||+|||+++........ .......||..|+|||++.+ ..++.++|||
T Consensus       124 LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (317)
T cd07868         124 LHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  200 (317)
T ss_pred             HHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHH
Confidence            99998   9999999999999    45678999999999875432211 11234578999999999876 4689999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCcc------hHHhhhhhh--------cccc------ccccccCCccC---------C
Q 021891          146 SFGVVLLEMLTGRRSMDKNRPNGEHN------LVEWARPHL--------GERR------RFYRLIDPRLE---------G  196 (306)
Q Consensus       146 slG~il~elltg~~pf~~~~~~~~~~------~~~~~~~~~--------~~~~------~~~~~~~~~~~---------~  196 (306)
                      |+||++|+|++|.+||..........      .........        ....      ...........         .
T Consensus       201 slG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (317)
T cd07868         201 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYME  280 (317)
T ss_pred             HHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHH
Confidence            99999999999999997544321100      000000000        0000      00000000000         0


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          197 HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       197 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .........+.+||.+||+.||.+|||++|+++|
T Consensus       281 ~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h  314 (317)
T cd07868         281 KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  314 (317)
T ss_pred             hcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0000113468899999999999999999999986


No 169
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00  E-value=7.7e-39  Score=272.08  Aligned_cols=213  Identities=24%  Similarity=0.396  Sum_probs=170.6

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +|.+|++++++++||||+++++++.+++..++||||+++++|.+++......+++..++.++.|++.||.|||+.+   +
T Consensus        51 ~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~  127 (269)
T cd05065          51 DFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---Y  127 (269)
T ss_pred             HHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---E
Confidence            3778999999999999999999999999999999999999999999776667899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeec-c--cccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR-V--MGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-  156 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~-~--~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-  156 (306)
                      +|+||||+||+++.++.+||+|||++.............. .  ..+..|+|||.+.+..++.++|||||||++|||++ 
T Consensus       128 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~  207 (269)
T cd05065         128 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY  207 (269)
T ss_pred             eecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcC
Confidence            9999999999999999999999999876543222111111 1  12457999999998899999999999999999886 


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      |..||.......   ...+...          .....    .+...+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       208 g~~p~~~~~~~~---~~~~i~~----------~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         208 GERPYWDMSNQD---VINAIEQ----------DYRLP----PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             CCCCCCCCCHHH---HHHHHHc----------CCcCC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            999986543221   1111110          00000    111235678899999999999999999999998764


No 170
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00  E-value=1.2e-38  Score=270.61  Aligned_cols=212  Identities=24%  Similarity=0.399  Sum_probs=171.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.++++++||||+++++++.+++..++||||+++++|.+++.+....+++..+..++.|++.||.|||+.+   ++
T Consensus        52 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~  128 (267)
T cd05066          52 FLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YV  128 (267)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            678999999999999999999999999999999999999999999776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      ||||||+||+++.++.++|+|||++........... .....++..|+|||.+.+..++.++|+|||||++|++++ |..
T Consensus       129 h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~  208 (267)
T cd05066         129 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER  208 (267)
T ss_pred             ehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCC
Confidence            999999999999999999999999987644322111 111223567999999998889999999999999999886 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||........   .....    ...      ...    .+...+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       209 p~~~~~~~~~---~~~~~----~~~------~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         209 PYWEMSNQDV---IKAIE----EGY------RLP----APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             CcccCCHHHH---HHHHh----CCC------cCC----CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence            9876533211   11110    000      000    111235678999999999999999999999998864


No 171
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00  E-value=4.5e-39  Score=294.55  Aligned_cols=209  Identities=26%  Similarity=0.316  Sum_probs=168.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC--------eeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD--------QRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLA   70 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~--------~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~   70 (306)
                      +++|+.++..++|+||+++++.+...+        .+++||||+++|+|.+++..+   ...+++..+..++.|++.||.
T Consensus        78 ~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~  157 (496)
T PTZ00283         78 AQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVH  157 (496)
T ss_pred             HHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence            578999999999999999988775432        368999999999999988643   346899999999999999999


Q ss_pred             HhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           71 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        71 ~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      |||+.+   |+||||||+|||++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||+
T Consensus       158 ~lH~~~---IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvi  234 (496)
T PTZ00283        158 HVHSKH---MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVL  234 (496)
T ss_pred             HHHhCC---EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHH
Confidence            999988   99999999999999999999999999987544333333345679999999999999899999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          151 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       151 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      +|||++|..||.......      ........      ...     .++...+.++.+|+.+||+.||.+||++.+++++
T Consensus       235 lyeLltG~~Pf~~~~~~~------~~~~~~~~------~~~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        235 LYELLTLKRPFDGENMEE------VMHKTLAG------RYD-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHCCCCCCCCCHHH------HHHHHhcC------CCC-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            999999999997542211      11110000      000     1122335789999999999999999999999976


No 172
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00  E-value=1.9e-38  Score=268.38  Aligned_cols=211  Identities=27%  Similarity=0.378  Sum_probs=171.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++.+.+..+++|||+++++|.+++......+++..++.++.|++.||.|||+.+   ++
T Consensus        47 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~  123 (262)
T cd06613          47 IQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KI  123 (262)
T ss_pred             HHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ce
Confidence            678999999999999999999999999999999999999999998776567999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC---CCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||+|+||+++.++.+||+|||++.......  .......++..|+|||.+.+.   .++.++|||||||++|+|++|.
T Consensus       124 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~  201 (262)
T cd06613         124 HRDIKGANILLTEDGDVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQ  201 (262)
T ss_pred             ecCCChhhEEECCCCCEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCC
Confidence            99999999999999999999999987654321  122335678899999998776   8899999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||............  .      ..   . +.+.. .......+.++.+++.+||..+|.+|||+.+++.+
T Consensus       202 ~p~~~~~~~~~~~~~--~------~~---~-~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         202 PPMFDLHPMRALFLI--S------KS---N-FPPPK-LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             CCCCCCCHHHHHHHH--H------hc---c-CCCcc-ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            999754322111000  0      00   0 00000 01123456789999999999999999999999875


No 173
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00  E-value=1.1e-38  Score=278.78  Aligned_cols=225  Identities=20%  Similarity=0.238  Sum_probs=166.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|+++++.++||||+++++++..++..++||||+++++|.+++..+ ...+++..++.++.|++.||.|||+.+   +
T Consensus        46 ~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---i  122 (327)
T cd08227          46 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---Y  122 (327)
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---E
Confidence            567999999999999999999999999999999999999999998654 345899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce-----eeecccccccccCCcchhc--CCCCchhHHHHHHHHHHH
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~e  153 (306)
                      +||||||+||+++.++.++++||+............     ......++..|+|||++.+  ..++.++|||||||++||
T Consensus       123 iH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~e  202 (327)
T cd08227         123 VHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE  202 (327)
T ss_pred             ecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHH
Confidence            999999999999999999999998654432111100     0112346778999999875  468999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhhhhcc---------------------cccccc---------ccCCccCCCCCHHHH
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARPHLGE---------------------RRRFYR---------LIDPRLEGHFSIKGA  203 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~---------~~~~~~~~~~~~~~~  203 (306)
                      |++|..||........  ...........                     ...+..         ..............+
T Consensus       203 l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (327)
T cd08227         203 LANGHVPFKDMPATQM--LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFS  280 (327)
T ss_pred             HHHCCCCCCCcchhHH--HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccC
Confidence            9999999975332110  00000000000                     000000         000000011222345


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          204 QKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       204 ~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ..+.+|+.+||+.||++|||+++++++.
T Consensus       281 ~~~~~li~~~l~~dP~~Rpt~~ell~~p  308 (327)
T cd08227         281 PHFHHFVEQCLQRNPDARPSASTLLNHS  308 (327)
T ss_pred             HHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence            6899999999999999999999999864


No 174
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00  E-value=1.6e-38  Score=269.66  Aligned_cols=214  Identities=25%  Similarity=0.344  Sum_probs=172.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      |.+|+++++.++|+||+++++++..++..++||||+++++|.+++..   ....+++..++.++.||+.||.|||+.+  
T Consensus        49 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--  126 (267)
T cd08229          49 CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--  126 (267)
T ss_pred             HHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--
Confidence            67899999999999999999999999999999999999999998853   2346899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ++|+||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++||||||+++|+|++|.
T Consensus       127 -i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~  203 (267)
T cd08229         127 -VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             -eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCC
Confidence             99999999999999999999999999876543221  123356888999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .||....... .......          .....+..   .....+..+.+++.+||..||++|||+.+|++.++.+
T Consensus       204 ~p~~~~~~~~-~~~~~~~----------~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         204 SPFYGDKMNL-YSLCKKI----------EQCDYPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCcccccchH-HHHhhhh----------hcCCCCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            9986532210 0000000          00001111   1123457899999999999999999999999987654


No 175
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00  E-value=1.9e-38  Score=274.93  Aligned_cols=220  Identities=25%  Similarity=0.377  Sum_probs=170.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~i   80 (306)
                      +.+|++++++++||||+++++++.+++..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+ .+   +
T Consensus        46 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~---i  121 (308)
T cd06615          46 IIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHK---I  121 (308)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---E
Confidence            578999999999999999999999999999999999999999998655 468999999999999999999997 46   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||||+||+++.++.+||+|||++.......    .....|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p  197 (308)
T cd06615         122 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYP  197 (308)
T ss_pred             EECCCChHHEEEecCCcEEEccCCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987643321    2345688999999999888899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhcccc-------------------c-cccc---cCCccCCCCCHHHHHHHHHHHHHcccCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERR-------------------R-FYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRD  217 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~  217 (306)
                      |.......................                   . ....   ..+...   ....+.++.+|+.+||..|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~  274 (308)
T cd06615         198 IPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKN  274 (308)
T ss_pred             CCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCC
Confidence            865432211111100000000000                   0 0000   000000   0013567899999999999


Q ss_pred             CCCCCCHHHHHHHhC
Q 021891          218 PKARPLMSEVVEALK  232 (306)
Q Consensus       218 p~~Rps~~ell~~l~  232 (306)
                      |++|||+.+++++..
T Consensus       275 P~~Rpt~~~ll~~~~  289 (308)
T cd06615         275 PKERADLKELTKHPF  289 (308)
T ss_pred             hhhCcCHHHHhcChh
Confidence            999999999998754


No 176
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00  E-value=5.8e-39  Score=280.14  Aligned_cols=199  Identities=27%  Similarity=0.372  Sum_probs=160.8

Q ss_pred             HHHHHHHHhcCCCC-cccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~-niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +..|++++..++|+ +|+++++++.+.+..|+||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+   |
T Consensus        47 ~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~---i  122 (324)
T cd05587          47 TMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKG---I  122 (324)
T ss_pred             HHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            45788899999765 58889999999999999999999999999886543 6899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+|||++.++.+||+|||++........  ......||..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       123 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p  200 (324)
T cd05587         123 IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP  200 (324)
T ss_pred             EecCCCHHHeEEcCCCCEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence            9999999999999999999999999875322211  22345789999999999998999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      |........   ....   ...        ..    .++...+..+.+++.+||+.||.+|++.
T Consensus       201 f~~~~~~~~---~~~i---~~~--------~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         201 FDGEDEDEL---FQSI---MEH--------NV----SYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCCHHHH---HHHH---HcC--------CC----CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            975432111   1100   000        01    1112235678999999999999999976


No 177
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00  E-value=1.6e-38  Score=270.25  Aligned_cols=215  Identities=27%  Similarity=0.388  Sum_probs=165.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----LPLPWSIRMKIALGAAKGLAFLHEEAE   77 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~~   77 (306)
                      |.+|+.++++++||||+++++++.+....++||||+++|+|.+++....    ...++..+..++.|++.||.|||+.+ 
T Consensus        42 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-  120 (269)
T cd05087          42 FLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-  120 (269)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence            6789999999999999999999999999999999999999999986432    24567788899999999999999988 


Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-------CCCchhHHHHHHHH
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-------HLTSRSDVYSFGVV  150 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslG~i  150 (306)
                        ++|+||||+||+++.++.+||+|||++................++..|+|||++.+.       .++.++||||||++
T Consensus       121 --i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  198 (269)
T cd05087         121 --FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVT  198 (269)
T ss_pred             --EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHH
Confidence              999999999999999999999999999764433222222335577889999998632       35789999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      +|||++ |..||........   ......     ........+...    ...+..+.+++..|+ .+|++|||+++|++
T Consensus       199 l~el~~~g~~p~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         199 IWELFELGSQPYRHLSDEQV---LTYTVR-----EQQLKLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHhCCCCCCCCCChHHH---HHHHhh-----cccCCCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            999996 9999965432211   111000     000111122211    122456889999999 68999999999998


Q ss_pred             HhC
Q 021891          230 ALK  232 (306)
Q Consensus       230 ~l~  232 (306)
                      .|.
T Consensus       266 ~l~  268 (269)
T cd05087         266 LLS  268 (269)
T ss_pred             Hhc
Confidence            764


No 178
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=8.3e-39  Score=280.32  Aligned_cols=215  Identities=26%  Similarity=0.394  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      |.+|+++++++ +|+||+++++++...+..++||||+++++|.+++.++.               ..+++..+..++.|+
T Consensus        64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  143 (334)
T cd05100          64 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQV  143 (334)
T ss_pred             HHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHH
Confidence            67899999999 89999999999999999999999999999999986532               247888999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++|||
T Consensus       144 ~~al~~LH~~g---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  220 (334)
T cd05100         144 ARGMEYLASQK---CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  220 (334)
T ss_pred             HHHHHHHHHCC---eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhH
Confidence            99999999988   999999999999999999999999999865433222222223345679999999988999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||++ |..||........      ... .....          ....+...+..+.+++.+||+.+|++|||+
T Consensus       221 slG~il~el~~~g~~p~~~~~~~~~------~~~-~~~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~  283 (334)
T cd05100         221 SFGVLLWEIFTLGGSPYPGIPVEEL------FKL-LKEGH----------RMDKPANCTHELYMIMRECWHAVPSQRPTF  283 (334)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCHHHH------HHH-HHcCC----------CCCCCCCCCHHHHHHHHHHcccChhhCcCH
Confidence            99999999998 7888865432111      100 00000          001112234688999999999999999999


Q ss_pred             HHHHHHhCCCCC
Q 021891          225 SEVVEALKPLPN  236 (306)
Q Consensus       225 ~ell~~l~~~~~  236 (306)
                      .++++.|+.+..
T Consensus       284 ~ell~~l~~~~~  295 (334)
T cd05100         284 KQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHHHHHHhh
Confidence            999999976654


No 179
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00  E-value=1.1e-38  Score=276.54  Aligned_cols=224  Identities=23%  Similarity=0.336  Sum_probs=169.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++..++..++||||+++ +|.+++......+++..+..++.||+.||.|||+.+   |+
T Consensus        51 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---iv  126 (309)
T cd07872          51 AIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VL  126 (309)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            56899999999999999999999999999999999965 898888776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus       127 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~p  204 (309)
T cd07872         127 HRDLKPQNLLINERGELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPL  204 (309)
T ss_pred             cCCCCHHHEEECCCCCEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876433221  1223457889999999865 4689999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhh--------hhhccccccccccCCccCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          161 MDKNRPNGEHNLVEWAR--------PHLGERRRFYRLIDPRLEG----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |......+....+....        ........+...-.+....    ......+.++.+||.+||+.||.+|||+.|++
T Consensus       205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l  284 (309)
T cd07872         205 FPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAM  284 (309)
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHh
Confidence            97654432211111100        0000000000000000000    00112356789999999999999999999999


Q ss_pred             HHh
Q 021891          229 EAL  231 (306)
Q Consensus       229 ~~l  231 (306)
                      ++.
T Consensus       285 ~h~  287 (309)
T cd07872         285 KHA  287 (309)
T ss_pred             cCh
Confidence            854


No 180
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00  E-value=1.3e-38  Score=270.69  Aligned_cols=214  Identities=29%  Similarity=0.412  Sum_probs=163.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----LPLPWSIRMKIALGAAKGLAFLHEEAE   77 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~~   77 (306)
                      |.+|+++++.++|+||+++++.+.+....++||||+++|+|.+++....    ...++..+..++.||+.||+|||+.+ 
T Consensus        42 ~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-  120 (269)
T cd05042          42 FLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-  120 (269)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-
Confidence            6789999999999999999999999999999999999999999986543    23467888999999999999999988 


Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-------CCCCchhHHHHHHHH
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-------GHLTSRSDVYSFGVV  150 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~i  150 (306)
                        |+||||||+||+++.++.+||+|||++................++..|+|||++..       ..++.++|||||||+
T Consensus       121 --ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~  198 (269)
T cd05042         121 --FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVT  198 (269)
T ss_pred             --EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHH
Confidence              99999999999999999999999999876433222222223345677999998753       356889999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      +|||++ |..||.......   ....   ....  .......+..    ....+..+.+++..|| .||++|||+++|++
T Consensus       199 l~el~~~~~~p~~~~~~~~---~~~~---~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         199 MWELFTAADQPYPDLSDEQ---VLKQ---VVRE--QDIKLPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHhCCCCCCCcCCHHH---HHHH---Hhhc--cCccCCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            999999 777886543211   1100   0000  0001112222    2233467778999998 59999999999998


Q ss_pred             Hh
Q 021891          230 AL  231 (306)
Q Consensus       230 ~l  231 (306)
                      .|
T Consensus       266 ~l  267 (269)
T cd05042         266 LL  267 (269)
T ss_pred             Hh
Confidence            76


No 181
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00  E-value=7.1e-39  Score=277.04  Aligned_cols=210  Identities=25%  Similarity=0.385  Sum_probs=167.3

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALGA   65 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~qi   65 (306)
                      |.+|++++.++ +|+||+++++++.+++..++||||+++++|.+++.+..               ..+++..++.++.|+
T Consensus        54 ~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  133 (303)
T cd05088          54 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV  133 (303)
T ss_pred             HHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHH
Confidence            67899999999 89999999999999999999999999999999986432               257899999999999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +.||+|||+.+   ++||||||+||+++.++.+||+|||++.......   ......++..|+|||++.+..++.++|||
T Consensus       134 ~~al~~LH~~g---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  207 (303)
T cd05088         134 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVW  207 (303)
T ss_pred             HHHHHHHHhCC---ccccccchheEEecCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccch
Confidence            99999999988   9999999999999999999999999986422111   11112335679999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          146 SFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       146 slG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ||||++|||+| |..||........   ...    ....      ...    ..+...+..+.+|+.+||+.+|++||++
T Consensus       208 slG~il~ellt~g~~p~~~~~~~~~---~~~----~~~~------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~  270 (303)
T cd05088         208 SYGVLLWEIVSLGGTPYCGMTCAEL---YEK----LPQG------YRL----EKPLNCDDEVYDLMRQCWREKPYERPSF  270 (303)
T ss_pred             hhhhHHHHHHhcCCCCcccCChHHH---HHH----HhcC------CcC----CCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            99999999998 9999865432211   100    0000      000    0111234678999999999999999999


Q ss_pred             HHHHHHhCCC
Q 021891          225 SEVVEALKPL  234 (306)
Q Consensus       225 ~ell~~l~~~  234 (306)
                      .++++.|+.+
T Consensus       271 ~~il~~l~~~  280 (303)
T cd05088         271 AQILVSLNRM  280 (303)
T ss_pred             HHHHHHHHHH
Confidence            9999988654


No 182
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00  E-value=2.4e-39  Score=283.26  Aligned_cols=205  Identities=27%  Similarity=0.303  Sum_probs=160.5

Q ss_pred             HHHHHHHhcC---CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            3 QAEVNFLGDL---VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         3 ~~E~~il~~l---~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      .+|..++..+   .||||+++++++.+.+..|+||||+++|+|.+++.+. ..+++..+..++.||+.||+|||+.+   
T Consensus        41 ~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~---  116 (330)
T cd05586          41 IGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYD---  116 (330)
T ss_pred             HHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            3456666655   6999999999999999999999999999999988654 46899999999999999999999998   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||||||+|||++.++.+||+|||++........  ......||..|+|||++.+. .++.++|||||||++|+|++|.
T Consensus       117 ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~  194 (330)
T cd05586         117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGW  194 (330)
T ss_pred             eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCC
Confidence            99999999999999999999999999875332221  22345789999999998754 5899999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC----CHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----s~~ell~~  230 (306)
                      .||...........+      ....        ..+..   ...+..+.+|+.+||+.||.+||    ++.++++|
T Consensus       195 ~Pf~~~~~~~~~~~i------~~~~--------~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         195 SPFYAEDTQQMYRNI------AFGK--------VRFPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             CCCCCCCHHHHHHHH------HcCC--------CCCCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence            999764321110000      0000        00000   01246788999999999999998    46666654


No 183
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00  E-value=2e-38  Score=271.45  Aligned_cols=211  Identities=25%  Similarity=0.381  Sum_probs=169.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++.++|+||+++++++..++..++||||+++++|..++.+....+++..+..++.|++.||.|||+.+   ++
T Consensus        49 ~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~  125 (282)
T cd06643          49 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---II  125 (282)
T ss_pred             HHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999999999988665567999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+||+++.++.+||+|||++.......  .......++..|+|||++.     +..++.++|||||||++|+|++
T Consensus       126 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~  203 (282)
T cd06643         126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQ  203 (282)
T ss_pred             ecCCCcccEEEccCCCEEEccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHcc
Confidence            99999999999999999999999987643221  1223356889999999974     3457889999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.+||........  ......    .       ..+..  ..+...+..+.+||.+||+.||.+||++.+++++..
T Consensus       204 g~~p~~~~~~~~~--~~~~~~----~-------~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         204 IEPPHHELNPMRV--LLKIAK----S-------EPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             CCCCccccCHHHH--HHHHhh----c-------CCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence            9999875432111  010000    0       00000  011223568899999999999999999999998653


No 184
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00  E-value=2.2e-38  Score=272.04  Aligned_cols=212  Identities=25%  Similarity=0.413  Sum_probs=168.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      |.+|+.+++.++|+||+++++++.+.+..++||||+++|+|.+++.+..         ..++...+..++.|++.||.||
T Consensus        56 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  135 (288)
T cd05061          56 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL  135 (288)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999999996421         2356778899999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      |+.+   ++||||||+||+++.++.++|+|||+++...............++..|+|||.+.+..++.++|||||||++|
T Consensus       136 H~~~---i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~  212 (288)
T cd05061         136 NAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW  212 (288)
T ss_pred             HhCC---CcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHH
Confidence            9988   9999999999999999999999999988654332222222234567899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||++ |..||.......   ......    ....      .    ..+...+..+.+++.+||+.||++|||+.++++.|
T Consensus       213 el~~~~~~p~~~~~~~~---~~~~~~----~~~~------~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l  275 (288)
T cd05061         213 EITSLAEQPYQGLSNEQ---VLKFVM----DGGY------L----DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL  275 (288)
T ss_pred             HHHhCCCCCCCCCCHHH---HHHHHH----cCCC------C----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            9998 678886532211   111100    0000      0    01112346899999999999999999999999988


Q ss_pred             CC
Q 021891          232 KP  233 (306)
Q Consensus       232 ~~  233 (306)
                      +.
T Consensus       276 ~~  277 (288)
T cd05061         276 KD  277 (288)
T ss_pred             Hh
Confidence            75


No 185
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00  E-value=2e-38  Score=267.58  Aligned_cols=207  Identities=27%  Similarity=0.407  Sum_probs=166.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEE-eCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCI-EDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |.+|+.++++++|+||+++++++. .++..++||||+++++|.+++.++. ..+++..++.++.|++.||+|||+.+   
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---  122 (256)
T cd05082          46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---  122 (256)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            678999999999999999999765 4567899999999999999987654 34889999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      ++||||||+||+++.++.+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~  197 (256)
T cd05082         123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  197 (256)
T ss_pred             EeccccchheEEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999987643221     12234567999999988889999999999999999998 88


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      .||.......   ......    .      ...+.    .....+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       198 ~p~~~~~~~~---~~~~~~----~------~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         198 VPYPRIPLKD---VVPRVE----K------GYKMD----APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCCCHHH---HHHHHh----c------CCCCC----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            8886432211   111100    0      00111    112235688999999999999999999999998864


No 186
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00  E-value=2e-38  Score=267.56  Aligned_cols=210  Identities=29%  Similarity=0.489  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++......++||||+++++|.+++......+++..++.++.|++.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~  122 (256)
T cd05112          46 FIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VI  122 (256)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            678999999999999999999999999999999999999999999766667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.++|+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       123 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  201 (256)
T cd05112         123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTP  201 (256)
T ss_pred             ccccccceEEEcCCCeEEECCCcceeecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999876533211 11122334668999999988889999999999999999998 8999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.......   ....    ....   .....+.       ..+..+.+|+.+||+.+|++|||+.++++.|.
T Consensus       202 ~~~~~~~~---~~~~----~~~~---~~~~~~~-------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         202 YENRSNSE---VVET----INAG---FRLYKPR-------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCcCCHHH---HHHH----HhCC---CCCCCCC-------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            86533211   1110    0000   0111111       12468999999999999999999999999863


No 187
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00  E-value=2.3e-38  Score=270.61  Aligned_cols=212  Identities=24%  Similarity=0.371  Sum_probs=171.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++.. ...++||||+++|+|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        56 ~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~  131 (279)
T cd05057          56 ILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LV  131 (279)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EE
Confidence            6789999999999999999999987 7889999999999999999876667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.+||+|||+++...............++..|+|||.+....++.++|||||||++||+++ |..|
T Consensus       132 H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  211 (279)
T cd05057         132 HRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999987654332222222233567999999988889999999999999999998 9999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      |...........       ......   ..       .+...+..+.+++.+||..||++||++.++++.|..+
T Consensus       212 ~~~~~~~~~~~~-------~~~~~~---~~-------~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         212 YEGIPAVEIPDL-------LEKGER---LP-------QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             CCCCCHHHHHHH-------HhCCCC---CC-------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            876432211110       000000   00       0111235788999999999999999999999988754


No 188
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00  E-value=2e-38  Score=271.64  Aligned_cols=226  Identities=25%  Similarity=0.348  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |.+|++++++++||||+++++++...  ...++||||+++++|.+++.+....+++..++.++.|++.||.|||+.+   
T Consensus        52 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---  128 (284)
T cd05081          52 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---  128 (284)
T ss_pred             HHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            67899999999999999999987543  4688999999999999999766557899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++||||||+||+++.++.+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++|.
T Consensus       129 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~  208 (284)
T cd05081         129 YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYS  208 (284)
T ss_pred             ceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999987644322211 11122345699999998888999999999999999999987


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhc---cccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLG---ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .++......-    .........   ....+...+............+..+.+|+.+||..+|++|||+.+|++.|+.+
T Consensus       209 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         209 DKSCSPPAEF----MRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CcCCCcchhh----hhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            7654321100    000000000   00000000000000001122346899999999999999999999999998754


No 189
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00  E-value=2.1e-38  Score=268.25  Aligned_cols=213  Identities=25%  Similarity=0.405  Sum_probs=165.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe-CCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+.+++.++||||+++++++.. ++..++||||+.+++|.+++.+....+++..+..++.|++.||.|||+.+   +
T Consensus        43 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i  119 (262)
T cd05058          43 FLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK---F  119 (262)
T ss_pred             HHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            5689999999999999999998764 55678999999999999999766556788888999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc--eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC-
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG-  157 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-  157 (306)
                      +||||||+||+++.++.+||+|||+++........  .......++..|+|||.+.+..++.++|||||||++|||++| 
T Consensus       120 ~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~  199 (262)
T cd05058         120 VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  199 (262)
T ss_pred             cccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999764332111  111223456789999999888899999999999999999995 


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .+||......   ......   .. .      ......    ...+..+.+++.+||..+|++||++.++++.|+.+
T Consensus       200 ~~~~~~~~~~---~~~~~~---~~-~------~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         200 APPYPDVDSF---DITVYL---LQ-G------RRLLQP----EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CCCCCCCCHH---HHHHHH---hc-C------CCCCCC----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            5556443211   111111   00 0      001111    12246789999999999999999999999988643


No 190
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=2.2e-38  Score=268.99  Aligned_cols=211  Identities=24%  Similarity=0.356  Sum_probs=167.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|+.++++++||||+++++++..++..++||||+++++|.+++.++ ..+++..+..++.|++.||.|||+.+   |+
T Consensus        53 ~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~  128 (267)
T cd06646          53 IQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKG---KM  128 (267)
T ss_pred             HHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            578999999999999999999999999999999999999999988654 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ||||||+||+++.++.++|+|||++........  ......|+..|+|||.+.   ...++.++|||||||++|||++|.
T Consensus       129 H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~  206 (267)
T cd06646         129 HRDIKGANILLTDNGDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQ  206 (267)
T ss_pred             ccCCCHHHEEECCCCCEEECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCC
Confidence            999999999999999999999999986532211  122346788999999874   345788999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||............        ....   ...+...  .....+..+.+++.+||+.+|++|||+++++++|
T Consensus       207 ~p~~~~~~~~~~~~~--------~~~~---~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         207 PPMFDLHPMRALFLM--------SKSN---FQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             CCccccchhhhheee--------ecCC---CCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            998654322111000        0000   0001110  0112356889999999999999999999999876


No 191
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00  E-value=1.6e-38  Score=269.68  Aligned_cols=208  Identities=25%  Similarity=0.408  Sum_probs=169.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++++++||||+++++++...+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   ++
T Consensus        53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~---iv  128 (267)
T cd06628          53 LAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRG---II  128 (267)
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcC---cc
Confidence            678999999999999999999999999999999999999999999654 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCc----ceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK----THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                      |+||+|+||+++.++.++|+|||+++.......    ........|+..|+|||.+.+..++.++|||||||++|+|++|
T Consensus       129 H~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g  208 (267)
T cd06628         129 HRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG  208 (267)
T ss_pred             cccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC
Confidence            999999999999999999999999887642211    1111234578899999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ..||.......   .+.  .  .      .....+.    .+...+..+.++|.+||+.||.+||++.+++++
T Consensus       209 ~~p~~~~~~~~---~~~--~--~------~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         209 KHPFPDCTQLQ---AIF--K--I------GENASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             CCCCCCccHHH---HHH--H--H------hccCCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            99997542211   000  0  0      0011111    222345788999999999999999999999975


No 192
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00  E-value=2.3e-38  Score=267.10  Aligned_cols=208  Identities=25%  Similarity=0.363  Sum_probs=171.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++|+||+++++++.+.+..++||||+++++|.+++.+. ...+++..+..++.|++.||.|||+.+   +
T Consensus        46 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i  122 (256)
T cd08221          46 ALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---I  122 (256)
T ss_pred             HHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            678999999999999999999999999999999999999999999765 456899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||+|+||+++.++.+||+|||++........  ......|+..|+|||++.+..++.++||||||+++|+|++|..|
T Consensus       123 ~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08221         123 LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRT  200 (256)
T ss_pred             cccCCChHhEEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999976543321  22345688999999999888899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |........      ......  ..    ..+     .....+.++.+++.+||+.+|++||++.++++++
T Consensus       201 ~~~~~~~~~------~~~~~~--~~----~~~-----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         201 FDATNPLNL------VVKIVQ--GN----YTP-----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CCCCCHHHH------HHHHHc--CC----CCC-----CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            865432111      000000  00    000     1123356789999999999999999999999875


No 193
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00  E-value=8.8e-39  Score=283.57  Aligned_cols=211  Identities=23%  Similarity=0.252  Sum_probs=165.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++.+++..++|||||++|+|.+++...  .+++..+..++.||+.||.|||+.+   |+
T Consensus        90 ~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---iv  164 (371)
T cd05622          90 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG---FI  164 (371)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence            568999999999999999999999999999999999999999988543  4889999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC----CCCchhHHHHHHHHHHHHHhC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~elltg  157 (306)
                      ||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+.    .++.++|||||||++|||++|
T Consensus       165 HrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G  243 (371)
T cd05622         165 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  243 (371)
T ss_pred             eCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhC
Confidence            999999999999999999999999987543221 122345799999999998754    378999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHhC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEALK  232 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~ell~~l~  232 (306)
                      ..||...........      ....... ....       .....+..+.++|.+||..++.+  |+++.++++|..
T Consensus       244 ~~Pf~~~~~~~~~~~------i~~~~~~-~~~~-------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~  306 (371)
T cd05622         244 DTPFYADSLVGTYSK------IMNHKNS-LTFP-------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF  306 (371)
T ss_pred             CCCCCCCCHHHHHHH------HHcCCCc-ccCC-------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence            999976432111000      0000000 0000       01123568889999999844433  789999998763


No 194
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00  E-value=1.4e-38  Score=272.64  Aligned_cols=218  Identities=28%  Similarity=0.430  Sum_probs=169.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |.+|+++++.++||||+++++++...  ...++||||+++++|.+++.+....+++..+..++.|++.||.|||+.+   
T Consensus        53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---  129 (284)
T cd05079          53 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---  129 (284)
T ss_pred             HHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            67899999999999999999998875  5688999999999999998766557899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++||||||+||+++.++.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|+++.
T Consensus       130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~  209 (284)
T cd05079         130 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC  209 (284)
T ss_pred             eeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCC
Confidence            999999999999999999999999999876443221 1122345677899999998888999999999999999999987


Q ss_pred             CCCCCCCCC---------CCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          159 RSMDKNRPN---------GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       159 ~pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      .|+......         ......... .......      ...    .....+..+.+|+.+||+.||++|||+.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         210 DSESSPMTLFLKMIGPTHGQMTVTRLV-RVLEEGK------RLP----RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             CCCccccchhhhhcccccccccHHHHH-HHHHcCc------cCC----CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            654321110         000000000 0000000      000    11123578999999999999999999999999


Q ss_pred             HhCC
Q 021891          230 ALKP  233 (306)
Q Consensus       230 ~l~~  233 (306)
                      .++.
T Consensus       279 ~l~~  282 (284)
T cd05079         279 GFEA  282 (284)
T ss_pred             HHHh
Confidence            8864


No 195
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00  E-value=2.9e-39  Score=285.97  Aligned_cols=210  Identities=26%  Similarity=0.349  Sum_probs=165.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++.+++|+||+++++.+.+.+..|+|||||++|+|.+++.+. ..+++..+..++.|++.||.|||+.+   |+
T Consensus        48 ~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~g---iv  123 (360)
T cd05627          48 IRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLG---FI  123 (360)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            567999999999999999999999999999999999999999998654 36899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc---------------------------------eeeeccccccccc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT---------------------------------HVSTRVMGTYGYA  128 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~  128 (306)
                      ||||||+||+++.++.+||+|||++.........                                 ......+||..|+
T Consensus       124 HrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  203 (360)
T cd05627         124 HRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYI  203 (360)
T ss_pred             ccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcccc
Confidence            9999999999999999999999998754321100                                 0011346899999


Q ss_pred             CCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHH
Q 021891          129 APEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ  208 (306)
Q Consensus       129 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (306)
                      |||++.+..++.++|||||||++|||++|..||...........+      ......  ..+.+.      ...+.++.+
T Consensus       204 APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i------~~~~~~--~~~p~~------~~~s~~~~~  269 (360)
T cd05627         204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKV------MNWKET--LVFPPE------VPISEKAKD  269 (360)
T ss_pred             CHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHH------HcCCCc--eecCCC------CCCCHHHHH
Confidence            999999999999999999999999999999999765432211110      000000  001110      012467889


Q ss_pred             HHHHcccCCCCCCCC---HHHHHHH
Q 021891          209 LAAHCLSRDPKARPL---MSEVVEA  230 (306)
Q Consensus       209 li~~~l~~~p~~Rps---~~ell~~  230 (306)
                      ||.+|+ .||.+|++   +.++++|
T Consensus       270 li~~l~-~~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         270 LILRFC-TDSENRIGSNGVEEIKSH  293 (360)
T ss_pred             HHHHhc-cChhhcCCCCCHHHHhcC
Confidence            999977 49999985   6777765


No 196
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00  E-value=1e-38  Score=283.74  Aligned_cols=224  Identities=24%  Similarity=0.316  Sum_probs=167.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +.+|+++|+.++|+||+++++++...+     ..|+||||+. ++|.+.+... ..+++..+..++.||+.||.|||+.+
T Consensus        46 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~  123 (372)
T cd07853          46 VFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAG  123 (372)
T ss_pred             HHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            568999999999999999999998776     7899999996 5888877544 47999999999999999999999998


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell  155 (306)
                         ++||||||+||+++.++.+||+|||+++........ ......++..|+|||++.+. .++.++|||||||++|||+
T Consensus       124 ---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~  199 (372)
T cd07853         124 ---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELL  199 (372)
T ss_pred             ---eeCCCCChHHEEECCCCCEEeccccceeecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHH
Confidence               999999999999999999999999999865432211 12334578899999998864 5799999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhh---------hhcc-ccccc-cccCCc-cC--CCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARP---------HLGE-RRRFY-RLIDPR-LE--GHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~---------~~~~-~~~~~-~~~~~~-~~--~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      +|+.||...........+.....         .... ...+. ....+. ..  .......+.++.+||.+||+.||++|
T Consensus       200 ~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R  279 (372)
T cd07853         200 GRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKR  279 (372)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhC
Confidence            99999976543322111110000         0000 00000 000000 00  00111235688999999999999999


Q ss_pred             CCHHHHHHHh
Q 021891          222 PLMSEVVEAL  231 (306)
Q Consensus       222 ps~~ell~~l  231 (306)
                      ||+.|+++|.
T Consensus       280 ~t~~e~l~hp  289 (372)
T cd07853         280 ISAADALAHP  289 (372)
T ss_pred             cCHHHHhcCH
Confidence            9999999874


No 197
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00  E-value=2.4e-38  Score=266.91  Aligned_cols=207  Identities=22%  Similarity=0.307  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.++|+||+++++.+.+++..++||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   +
T Consensus        45 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i  121 (255)
T cd08219          45 SRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---V  121 (255)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---c
Confidence            568999999999999999999999999999999999999999988653 456899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|+||||+++|+|++|..|
T Consensus       122 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         122 LHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP  199 (255)
T ss_pred             ccCCCCcceEEECCCCcEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCC
Confidence            9999999999999999999999999876543221  12335688899999999888899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |........   .   ......  .    .     ...+...+..+.+|+.+||+.||++|||+.+++..
T Consensus       200 ~~~~~~~~~---~---~~~~~~--~----~-----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         200 FQANSWKNL---I---LKVCQG--S----Y-----KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCCCHHHH---H---HHHhcC--C----C-----CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            975422111   0   000000  0    0     01122235678899999999999999999999874


No 198
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00  E-value=6.1e-38  Score=264.86  Aligned_cols=202  Identities=25%  Similarity=0.431  Sum_probs=163.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++.. ...++||||+++++|.+++......+++..+..++.||+.||.|||+.+   ++
T Consensus        48 ~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~  123 (259)
T cd05037          48 FFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK---LV  123 (259)
T ss_pred             HHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---ee
Confidence            6789999999999999999999988 7789999999999999999766557899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCC-------cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC--CCCchhHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADY-------NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLL  152 (306)
Q Consensus        82 H~dlkp~Nill~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~  152 (306)
                      ||||||+||+++.++       .+||+|||++.....      .....++..|+|||++.+.  .++.++|||||||++|
T Consensus       124 H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~  197 (259)
T cd05037         124 HGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLL  197 (259)
T ss_pred             cccCccceEEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHH
Confidence            999999999999887       799999999986433      1223456789999998876  7899999999999999


Q ss_pred             HHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +|++ |..||........   ..+..    ...   ....         .....+.+++.+||..+|.+|||+.++++.|
T Consensus       198 ~l~~~~~~p~~~~~~~~~---~~~~~----~~~---~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         198 EICSNGEEPLSTLSSSEK---ERFYQ----DQH---RLPM---------PDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHhCCCCCcccCCchhH---HHHHh----cCC---CCCC---------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            9999 4677755432111   11100    000   0000         0116888999999999999999999999876


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      .
T Consensus       259 ~  259 (259)
T cd05037         259 N  259 (259)
T ss_pred             C
Confidence            3


No 199
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00  E-value=5.3e-38  Score=265.99  Aligned_cols=210  Identities=25%  Similarity=0.384  Sum_probs=168.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |++|+++++.++|+||+++++++. .+..++||||+++++|.+++.+. ...+++..+..++.|++.||.|||+.+   +
T Consensus        48 ~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i  123 (262)
T cd05071          48 FLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y  123 (262)
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            688999999999999999999875 45689999999999999999753 345899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.++|+|||.++........ ......++..|+|||+..+..++.++|||||||++|+|++ |..
T Consensus       124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~  202 (262)
T cd05071         124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  202 (262)
T ss_pred             cccccCcccEEEcCCCcEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            99999999999999999999999999765433221 1222345678999999988889999999999999999999 788


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||........   ...    ....      ...    ......+..+.+|+.+||+.||++||++.++++.|+.
T Consensus       203 p~~~~~~~~~---~~~----~~~~------~~~----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         203 PYPGMVNREV---LDQ----VERG------YRM----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CCCCCChHHH---HHH----HhcC------CCC----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            8865432111   100    0000      000    1122345788999999999999999999999998864


No 200
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=100.00  E-value=1.3e-38  Score=273.07  Aligned_cols=210  Identities=30%  Similarity=0.392  Sum_probs=169.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+.++++++|+||+++++.+.+.+..++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+   +
T Consensus        47 ~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i  123 (285)
T cd05630          47 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---I  123 (285)
T ss_pred             HHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---E
Confidence            467999999999999999999999999999999999999999988543 346899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.++|+|||++........   .....|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~P  200 (285)
T cd05630         124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP  200 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876433221   1234689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHh
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  231 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~l  231 (306)
                      |..............   ....       ...    .+....+..+.+|+.+||+.||++|||     ++|+++|.
T Consensus       201 f~~~~~~~~~~~~~~---~~~~-------~~~----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~  262 (285)
T cd05630         201 FQQRKKKIKREEVER---LVKE-------VQE----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP  262 (285)
T ss_pred             CCCCCccchHHHHHh---hhhh-------hhh----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence            976432211111100   0000       000    111223467899999999999999999     88998753


No 201
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00  E-value=6.4e-38  Score=265.16  Aligned_cols=210  Identities=27%  Similarity=0.383  Sum_probs=167.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+++++.++|+||+++++++. .+..++||||+.+++|.+++... ...+++..+..++.|++.||.|||+.+   +
T Consensus        48 ~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i  123 (260)
T cd05069          48 FLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---Y  123 (260)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---E
Confidence            678999999999999999999875 45688999999999999999654 345889999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||++++++.++|+|||+++........ ......++..|+|||...+..++.++||||||+++|+|++ |..
T Consensus       124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~  202 (260)
T cd05069         124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV  202 (260)
T ss_pred             eecccCcceEEEcCCCeEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999765432211 1122345678999999988889999999999999999999 888


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||........   .....    .      .....    .+...+..+.+++.+||..||++||+++++++.|+.
T Consensus       203 p~~~~~~~~~---~~~~~----~------~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         203 PYPGMVNREV---LEQVE----R------GYRMP----CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCCCCCHHHH---HHHHH----c------CCCCC----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            9875432111   11100    0      00011    112335789999999999999999999999998864


No 202
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00  E-value=8.6e-39  Score=278.92  Aligned_cols=199  Identities=24%  Similarity=0.329  Sum_probs=161.2

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +..|..++..+ .|++|+++++++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+   |
T Consensus        47 ~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---i  122 (323)
T cd05616          47 TMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKG---I  122 (323)
T ss_pred             HHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---E
Confidence            34577777777 68999999999999999999999999999999886543 6899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+|||++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       123 vHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~P  200 (323)
T cd05616         123 IYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP  200 (323)
T ss_pred             EecCCCHHHeEECCCCcEEEccCCCceecCCCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCC
Confidence            9999999999999999999999999875432211  22345789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      |........   .....   ..        ..    .++...+.++.+++.+||+.||.+|+++
T Consensus       201 f~~~~~~~~---~~~i~---~~--------~~----~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         201 FEGEDEDEL---FQSIM---EH--------NV----AYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCCHHHH---HHHHH---hC--------CC----CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            976432211   11000   00        00    1122335788999999999999999985


No 203
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=100.00  E-value=4.5e-38  Score=265.43  Aligned_cols=207  Identities=29%  Similarity=0.487  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+.+++.++|+||+++++++.+.+..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+   +
T Consensus        47 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i  123 (256)
T cd05039          47 FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---F  123 (256)
T ss_pred             HHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            6789999999999999999999998899999999999999999986553 36899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.+||+|||+++......     ....++..|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       124 ~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~  198 (256)
T cd05039         124 VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  198 (256)
T ss_pred             cchhcccceEEEeCCCCEEEccccccccccccc-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999998753221     12234567999999988889999999999999999997 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ...    .....      ...    ..+...+..+.++|.+||..+|++|||+.++++.|+.
T Consensus       199 p~~~~~~~~---~~~----~~~~~------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         199 PYPRIPLKD---VVP----HVEKG------YRM----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCCCCCHHH---HHH----HHhcC------CCC----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            886542211   110    00000      000    1112235788999999999999999999999998864


No 204
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00  E-value=1.6e-38  Score=274.78  Aligned_cols=212  Identities=23%  Similarity=0.383  Sum_probs=169.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.+++.++||||+++++++... ..++|+||+++|+|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        56 ~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iv  131 (303)
T cd05110          56 FMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LV  131 (303)
T ss_pred             HHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---ee
Confidence            67899999999999999999998754 567899999999999999776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus       132 H~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p  211 (303)
T cd05110         132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP  211 (303)
T ss_pred             ccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987644332222223345678999999988899999999999999999997 8888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      |.......   ...+.    .....   ..   .    +...+..+.+++.+||..+|++||++.++++.|+.+
T Consensus       212 ~~~~~~~~---~~~~~----~~~~~---~~---~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         212 YDGIPTRE---IPDLL----EKGER---LP---Q----PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             CCCCCHHH---HHHHH----HCCCC---CC---C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            86542211   11111    01000   00   0    111245788999999999999999999999988754


No 205
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00  E-value=3.5e-38  Score=269.52  Aligned_cols=209  Identities=24%  Similarity=0.376  Sum_probs=166.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++...+..++||||+++++|..+.     .+++..+..++.|++.||.|||+.+   ++
T Consensus        46 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~  117 (279)
T cd06619          46 IMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLK---IL  117 (279)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            678999999999999999999999999999999999999997542     4788899999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||||+||+++.++.++|+|||++......    ......|+..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       118 H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf  193 (279)
T cd06619         118 HRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPY  193 (279)
T ss_pred             eCCCCHHHEEECCCCCEEEeeCCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999999999765332    123357899999999999889999999999999999999999999


Q ss_pred             CCCCCCCCcc-hHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          162 DKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       162 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .......... ...........       ..+...   ....+.++.+++.+||+.+|++||++++++++..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         194 PQIQKNQGSLMPLQLLQCIVDE-------DPPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF  255 (279)
T ss_pred             hhhcccccccchHHHHHHHhcc-------CCCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence            7543222111 01110000000       001100   1123467899999999999999999999998754


No 206
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=2.4e-38  Score=268.71  Aligned_cols=210  Identities=25%  Similarity=0.389  Sum_probs=167.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|+.+++.++||||+++++++...+..++||||+++++|.+++...+ .+++..++.++.|++.||.|||+.+   ++
T Consensus        53 ~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~  128 (267)
T cd06645          53 VQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKG---KM  128 (267)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            5789999999999999999999999999999999999999999886544 7899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||||+||+++.++.++|+|||++......  ........|+..|+|||++.   ...++.++|||||||++|+|++|.
T Consensus       129 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~  206 (267)
T cd06645         129 HRDIKGANILLTDNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQ  206 (267)
T ss_pred             cCCCCHHHEEECCCCCEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCC
Confidence            9999999999999999999999998764322  11223456899999999874   456889999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||.............  .      .   ....+....  ....+..+.++|.+||+.+|++|||+.+|+++
T Consensus       207 ~p~~~~~~~~~~~~~~--~------~---~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         207 PPMFDLHPMRALFLMT--K------S---NFQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CCcccccchhhHHhhh--c------c---CCCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            9986543221110000  0      0   000011100  01224578899999999999999999999976


No 207
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00  E-value=2.9e-38  Score=270.57  Aligned_cols=222  Identities=21%  Similarity=0.255  Sum_probs=166.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++.+.+..++|+||+. ++|.+++......+++..++.++.||++||.|||+.+   ++
T Consensus        46 ~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~  121 (284)
T cd07839          46 ALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VL  121 (284)
T ss_pred             hhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            5689999999999999999999999999999999996 5888887665667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++.......  ......++..|+|||++.+. .++.++|||||||++|+|++|..|
T Consensus       122 H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p  199 (284)
T cd07839         122 HRDLKPQNLLINKNGELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  199 (284)
T ss_pred             cCCCCHHHEEEcCCCcEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999976533221  12234568899999998764 478999999999999999999988


Q ss_pred             CCCCCCCCCcchHHhhhh-----------hhccccccc--cccCCccC-CCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          161 MDKNRPNGEHNLVEWARP-----------HLGERRRFY--RLIDPRLE-GHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      |........  .......           .........  ........ .......+.++.+||.+||+.||.+|||+.+
T Consensus       200 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~  277 (284)
T cd07839         200 LFPGNDVDD--QLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE  277 (284)
T ss_pred             CcCCCCHHH--HHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHH
Confidence            654322110  0000000           000000000  00000000 0011123578899999999999999999999


Q ss_pred             HHHHh
Q 021891          227 VVEAL  231 (306)
Q Consensus       227 ll~~l  231 (306)
                      +++|.
T Consensus       278 il~h~  282 (284)
T cd07839         278 ALQHP  282 (284)
T ss_pred             HhcCC
Confidence            99863


No 208
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00  E-value=4.9e-38  Score=265.84  Aligned_cols=210  Identities=26%  Similarity=0.402  Sum_probs=167.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|++++++++|+||+++++++. ....++||||+++++|.+++... ...+++..++.++.|++.||.|||+.+   +
T Consensus        48 ~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i  123 (260)
T cd05070          48 FLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---Y  123 (260)
T ss_pred             HHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            679999999999999999999875 45689999999999999998654 345899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +||||||+||+++.++.++|+|||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~  202 (260)
T cd05070         124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV  202 (260)
T ss_pred             ccCCCccceEEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999765432211 1122335667999999988889999999999999999999 888


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ......    ..      ...    ..+...+..+.+|+.+||..+|++|||+.++.+.|+.
T Consensus       203 p~~~~~~~~---~~~~~~----~~------~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         203 PYPGMNNRE---VLEQVE----RG------YRM----PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCCHHH---HHHHHH----cC------CCC----CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            886543211   111110    00      001    1122335689999999999999999999999998864


No 209
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=100.00  E-value=5e-38  Score=268.64  Aligned_cols=213  Identities=25%  Similarity=0.413  Sum_probs=170.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe-CCeeEEEEEcCCCCCHHHHhhcCC-------CCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRS-------LPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~-------~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      +.+|+++++.++|+||+++++++.. +...++++||+++++|.+++....       ..+++..++.++.|++.||.|||
T Consensus        55 ~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH  134 (280)
T cd05043          55 LLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH  134 (280)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999998776 467899999999999999986532       45899999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      +.+   ++|+||||+||+++.++.+||+|||+++.+.............++..|+|||++.+..++.++|||||||++||
T Consensus       135 ~~~---i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e  211 (280)
T cd05043         135 KRG---VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWE  211 (280)
T ss_pred             HCC---EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHH
Confidence            988   99999999999999999999999999986544332222223345678999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          154 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       154 llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      +++ |..||.......   ...+..    ...      ...    .....+..+.+++.+||..||++|||+.++++.|+
T Consensus       212 l~~~g~~p~~~~~~~~---~~~~~~----~~~------~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  274 (280)
T cd05043         212 LMTLGQTPYVEIDPFE---MAAYLK----DGY------RLA----QPINCPDELFAVMACCWALDPEERPSFSQLVQCLT  274 (280)
T ss_pred             HhcCCCCCcCcCCHHH---HHHHHH----cCC------CCC----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence            999 999997543221   111111    000      000    11123467899999999999999999999999886


Q ss_pred             CC
Q 021891          233 PL  234 (306)
Q Consensus       233 ~~  234 (306)
                      .+
T Consensus       275 ~~  276 (280)
T cd05043         275 DF  276 (280)
T ss_pred             HH
Confidence            54


No 210
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00  E-value=2.4e-38  Score=282.42  Aligned_cols=214  Identities=24%  Similarity=0.382  Sum_probs=169.2

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC------------------------------
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS------------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------------------------------   50 (306)
                      |.+|+++|.++. ||||+++++++...+..++|||||.+|+|.+++.+..                              
T Consensus        87 ~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (401)
T cd05107          87 LMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKS  166 (401)
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccccccccc
Confidence            578999999997 9999999999999999999999999999999985432                              


Q ss_pred             -------------------------------------------------------------------CCCCHHHHHHHHH
Q 021891           51 -------------------------------------------------------------------LPLPWSIRMKIAL   63 (306)
Q Consensus        51 -------------------------------------------------------------------~~l~~~~~~~~~~   63 (306)
                                                                                         ..+++..+..++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  246 (401)
T cd05107         167 HVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSY  246 (401)
T ss_pred             chhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHH
Confidence                                                                               1356778889999


Q ss_pred             HHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhH
Q 021891           64 GAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD  143 (306)
Q Consensus        64 qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  143 (306)
                      |++.||.|||+.+   ++||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|
T Consensus       247 qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         247 QVANGMEFLASKN---CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             HHHHHHHHHhcCC---cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            9999999999988   9999999999999999999999999998653322211222345678899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          144 VYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       144 iwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      ||||||++|||++ |..||.........      ........      .+.    .+...+.++.+|+.+||..+|.+||
T Consensus       324 vwslGvil~e~l~~g~~P~~~~~~~~~~------~~~~~~~~------~~~----~p~~~~~~l~~li~~cl~~~P~~RP  387 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPELPMNEQF------YNAIKRGY------RMA----KPAHASDEIYEIMQKCWEEKFEIRP  387 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCchHHH------HHHHHcCC------CCC----CCCCCCHHHHHHHHHHcCCChhHCc
Confidence            9999999999998 88888654321110      00000000      001    1112356899999999999999999


Q ss_pred             CHHHHHHHhCCC
Q 021891          223 LMSEVVEALKPL  234 (306)
Q Consensus       223 s~~ell~~l~~~  234 (306)
                      ++++|++.|+.+
T Consensus       388 s~~ell~~L~~~  399 (401)
T cd05107         388 DFSQLVHLVGDL  399 (401)
T ss_pred             CHHHHHHHHHHH
Confidence            999999998753


No 211
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00  E-value=8.3e-38  Score=265.68  Aligned_cols=215  Identities=21%  Similarity=0.337  Sum_probs=163.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      |.+|+.+++.++||||+++++++.+....++||||+++|+|.+++.+.   ....++..+..++.||+.||.|||+.+  
T Consensus        42 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--  119 (268)
T cd05086          42 FLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--  119 (268)
T ss_pred             HHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--
Confidence            678999999999999999999999999999999999999999998654   234677788899999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-------CCCCchhHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-------GHLTSRSDVYSFGVVL  151 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il  151 (306)
                       ++||||||+||+++.++.++|+|||++................++..|+|||++..       ..++.++|||||||++
T Consensus       120 -i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l  198 (268)
T cd05086         120 -FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL  198 (268)
T ss_pred             -eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHH
Confidence             99999999999999999999999999864322211122234567889999998743       2457899999999999


Q ss_pred             HHHHhC-CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          152 LEMLTG-RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       152 ~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |||+++ ..||.......   ...   ....  .......++.....    .+..+.+++..|| .+|++||++.+|++.
T Consensus       199 ~el~~~~~~p~~~~~~~~---~~~---~~~~--~~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~  265 (268)
T cd05086         199 WELFENAAQPYSHLSDRE---VLN---HVIK--DQQVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRL  265 (268)
T ss_pred             HHHHhCCCCCCCCCCHHH---HHH---HHHh--hcccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence            999974 66775432211   111   0110  11112223332222    3467888999999 689999999999987


Q ss_pred             hC
Q 021891          231 LK  232 (306)
Q Consensus       231 l~  232 (306)
                      |.
T Consensus       266 l~  267 (268)
T cd05086         266 LT  267 (268)
T ss_pred             hc
Confidence            63


No 212
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00  E-value=8.9e-38  Score=265.01  Aligned_cols=214  Identities=24%  Similarity=0.363  Sum_probs=172.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +.+|++++++++|+||+++++++...+..++||||+++++|.+++..   ....+++..++.++.|++.||.|||+.+  
T Consensus        49 ~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--  126 (267)
T cd08224          49 CLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--  126 (267)
T ss_pred             HHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            67899999999999999999999999999999999999999998853   2445899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ++|+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++|||||||++|+|++|.
T Consensus       127 -i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~  203 (267)
T cd08224         127 -IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ  203 (267)
T ss_pred             -EecCCcChhhEEECCCCcEEEeccceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCC
Confidence             99999999999999999999999999876533221  122346788999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .||......    ......... .     ... +..   .....+..+.++|.+||..+|++|||+.+|++.|+.+
T Consensus       204 ~p~~~~~~~----~~~~~~~~~-~-----~~~-~~~---~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         204 SPFYGDKMN----LYSLCKKIE-K-----CDY-PPL---PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CCcccCCcc----HHHHHhhhh-c-----CCC-CCC---ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            998654311    111100000 0     000 000   0113456889999999999999999999999988754


No 213
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=5.1e-38  Score=270.76  Aligned_cols=207  Identities=23%  Similarity=0.325  Sum_probs=168.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++|+||+++++++..+...++||||+++++|.+++.+.  .+++..+..++.|++.||.|||+.+   ++
T Consensus        64 ~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~g---i~  138 (296)
T cd06654          64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VI  138 (296)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            568999999999999999999999999999999999999999988543  5789999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||||+||+++.++.+||+|||++........  ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||
T Consensus       139 H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf  216 (296)
T cd06654         139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (296)
T ss_pred             cCCCCHHHEEEcCCCCEEECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876433221  122346788999999998888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ..........  .    .....       .+.  ...+...+..+.+++.+||..+|++|||+.+++++
T Consensus       217 ~~~~~~~~~~--~----~~~~~-------~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         217 LNENPLRALY--L----IATNG-------TPE--LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CCCCHHHhHH--H----HhcCC-------CCC--CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            7543311100  0    00000       000  01122345678999999999999999999999985


No 214
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00  E-value=1.1e-37  Score=272.84  Aligned_cols=214  Identities=20%  Similarity=0.248  Sum_probs=166.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |++|+.+++.++|+||+++++++.+++..|+||||+++|+|.+++.+....+++..+..++.||+.||+|||+.+   |+
T Consensus        48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iv  124 (331)
T cd05597          48 FREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YV  124 (331)
T ss_pred             HHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eE
Confidence            678999999999999999999999999999999999999999999766667999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-----CCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+|||++.++.+||+|||++........ .......||+.|+|||++..     ..++.++|||||||++|+|++
T Consensus       125 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~  203 (331)
T cd05597         125 HRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             ECCCCHHHEEECCCCCEEEEECCceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence            999999999999999999999999876543222 11223468999999999863     457889999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHhC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEALK  232 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~ell~~l~  232 (306)
                      |+.||........      ..........+ . +.+.     ....+..+.++|.+||..++++  |+++.++++|..
T Consensus       204 g~~Pf~~~~~~~~------~~~i~~~~~~~-~-~~~~-----~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~  268 (331)
T cd05597         204 GETPFYAESLVET------YGKIMNHKEHF-Q-FPPD-----VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF  268 (331)
T ss_pred             CCCCCCCCCHHHH------HHHHHcCCCcc-c-CCCc-----cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence            9999975432111      00000000000 0 0010     0123567889999988654443  789999999743


No 215
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=4.9e-40  Score=308.64  Aligned_cols=209  Identities=30%  Similarity=0.422  Sum_probs=171.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..+|.++|..|+|||+|++||+-.+.+..+|.||||.+|+|.+++ +.+.-.++.....+..|++.|+.|||+.|   ||
T Consensus      1281 i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll-~~gri~dE~vt~vyt~qll~gla~LH~~g---IV 1356 (1509)
T KOG4645|consen 1281 IAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLL-EHGRIEDEMVTRVYTKQLLEGLAYLHEHG---IV 1356 (1509)
T ss_pred             hHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHH-HhcchhhhhHHHHHHHHHHHHHHHHHhcC---ce
Confidence            578999999999999999999999999999999999999999988 44445777777889999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCc--ceeeecccccccccCCcchhcC---CCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+||+++.+|.+|++|||.|........  ....+..+||+.|||||++.+.   .-..++||||||||+.||+|
T Consensus      1357 HRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~t 1436 (1509)
T KOG4645|consen 1357 HRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMAT 1436 (1509)
T ss_pred             ecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeec
Confidence            999999999999999999999999987655421  1222457899999999999753   45678999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhh-hhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARP-HLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |+.||...+.+       |... +.+-      ...|    .++...+.+..++|..||+.||++|+++.||+++=
T Consensus      1437 GkrPW~~~dne-------~aIMy~V~~------gh~P----q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1437 GKRPWAELDNE-------WAIMYHVAA------GHKP----QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             CCCchhhccch-------hHHHhHHhc------cCCC----CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence            99999764331       1111 1111      1112    23444678899999999999999999999999863


No 216
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00  E-value=4e-38  Score=273.99  Aligned_cols=226  Identities=22%  Similarity=0.323  Sum_probs=161.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe--CCeeEEEEEcCCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRR--------SLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~--------~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      +.+|+++|++++||||+++++++..  +...++||||+. ++|.+++...        ...+++..++.++.||+.||.|
T Consensus        45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~  123 (317)
T cd07867          45 ACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHY  123 (317)
T ss_pred             HHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999998854  457899999996 4887776421        2358899999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEE----cCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhc-CCCCchhHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILL----DADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVY  145 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  145 (306)
                      ||+.+   ++||||||+||++    +.++.+||+|||+++........ .......||..|+|||++.+ ..++.++|||
T Consensus       124 lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (317)
T cd07867         124 LHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  200 (317)
T ss_pred             HHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHH
Confidence            99988   9999999999999    56678999999999875433221 11233568999999999876 4589999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCcc------hHHhhhhhhc--------c---cccc---cccc------CCcc---CC
Q 021891          146 SFGVVLLEMLTGRRSMDKNRPNGEHN------LVEWARPHLG--------E---RRRF---YRLI------DPRL---EG  196 (306)
Q Consensus       146 slG~il~elltg~~pf~~~~~~~~~~------~~~~~~~~~~--------~---~~~~---~~~~------~~~~---~~  196 (306)
                      ||||++|||+||.+||..........      ..........        .   ...+   ....      ....   ..
T Consensus       201 SlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (317)
T cd07867         201 AIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYME  280 (317)
T ss_pred             hHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhh
Confidence            99999999999999997543221100      0000000000        0   0000   0000      0000   00


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          197 HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       197 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .........+.+|+.+||+.||.+|||+.|+++|.
T Consensus       281 ~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp  315 (317)
T cd07867         281 KHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP  315 (317)
T ss_pred             cccCCCChHHHHHHHHHhccCcccccCHHHHhcCC
Confidence            00111235688999999999999999999999863


No 217
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00  E-value=2.4e-38  Score=270.87  Aligned_cols=229  Identities=26%  Similarity=0.354  Sum_probs=172.8

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEe--CCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +|++|+++++.++|+||+++++++..  ....++||||+++++|.+++......+++..+..++.|++.||.|||+.+  
T Consensus        52 ~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--  129 (284)
T cd05038          52 DFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--  129 (284)
T ss_pred             HHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            37899999999999999999999887  55789999999999999999776657999999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee-eecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV-STRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                       ++|+||||+||+++.++.++|+|||++........... .....++..|+|||.+.+..++.++|||||||+++||++|
T Consensus       130 -i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg  208 (284)
T cd05038         130 -YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTY  208 (284)
T ss_pred             -eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeecc
Confidence             99999999999999999999999999987653322211 1123345679999999888899999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ..|+............. .... .....+...+........+..++..+.+|+.+||+.+|++|||+.||++.|+.+
T Consensus       209 ~~p~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         209 GDPSQSPPAEFLRMIGI-AQGQ-MIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CCCcccccchhcccccc-cccc-ccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            99886532211100000 0000 000000000000001111123346899999999999999999999999998754


No 218
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00  E-value=3.8e-38  Score=267.99  Aligned_cols=212  Identities=24%  Similarity=0.356  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++.+ +..++||||+++++|.+++.+....+++..++.++.|++.||.|||+.+   ++
T Consensus        54 ~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~  129 (270)
T cd05056          54 FLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FV  129 (270)
T ss_pred             HHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            6789999999999999999998875 4578999999999999999776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |+||||+||+++.++.++|+|||+++....... .......++..|+|||.+....++.++||||||+++|||++ |..|
T Consensus       130 H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         130 HRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             ccccChheEEEecCCCeEEccCceeeecccccc-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999876544321 11222234567999999988889999999999999999986 9999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      |...........+       ....      ...    .+...+..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus       209 f~~~~~~~~~~~~-------~~~~------~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         209 FQGVKNNDVIGRI-------ENGE------RLP----MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             CCCCCHHHHHHHH-------HcCC------cCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9765332111110       0000      001    11223568999999999999999999999999887543


No 219
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00  E-value=4.7e-38  Score=269.38  Aligned_cols=223  Identities=21%  Similarity=0.251  Sum_probs=165.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++||||+++++++.+++..++||||+. ++|.+++...  +..+++..++.++.||+.||.|||+.+   
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---  121 (285)
T cd07861          46 AIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---  121 (285)
T ss_pred             HHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            5789999999999999999999999999999999997 5898887543  256899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||||+||+++.++.++|+|||++........  ......++..|+|||++.+. .++.++|||||||++|+|++|+
T Consensus       122 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~  199 (285)
T cd07861         122 VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK  199 (285)
T ss_pred             eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence            99999999999999999999999999876433211  12234568899999988654 5789999999999999999999


Q ss_pred             CCCCCCCCCCCcchH-Hhh----hhhhc---cccccccccCC---ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          159 RSMDKNRPNGEHNLV-EWA----RPHLG---ERRRFYRLIDP---RLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~-~~~----~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      .||............ ...    ...+.   ....+......   ..........+.++.++|.+||+.||.+|||+.+|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~l  279 (285)
T cd07861         200 PLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA  279 (285)
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence            999764321110000 000    00000   00000000000   00000011235678899999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      +.+
T Consensus       280 l~~  282 (285)
T cd07861         280 LNH  282 (285)
T ss_pred             hcC
Confidence            975


No 220
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00  E-value=5.5e-38  Score=271.22  Aligned_cols=225  Identities=22%  Similarity=0.305  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++..++..++||||+. ++|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        51 ~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~  126 (301)
T cd07873          51 AIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VL  126 (301)
T ss_pred             HHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            5689999999999999999999999999999999996 5999988776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||||+||+++.++.+||+|||++........  ......++..|+|||++.+ ..++.++|||||||++|+|++|.+|
T Consensus       127 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~  204 (301)
T cd07873         127 HRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPL  204 (301)
T ss_pred             CCCCCHHHEEECCCCcEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999976433221  1223356889999999875 4578999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhh--------hhhccccccccccCCccCC----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          161 MDKNRPNGEHNLVEWAR--------PHLGERRRFYRLIDPRLEG----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |...........+....        ........+...-.+....    ......+..+.+||.+||+.||.+|||+.|++
T Consensus       205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil  284 (301)
T cd07873         205 FPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM  284 (301)
T ss_pred             CCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence            97654321110000000        0000000000000000000    01112356788999999999999999999999


Q ss_pred             HHhC
Q 021891          229 EALK  232 (306)
Q Consensus       229 ~~l~  232 (306)
                      +|..
T Consensus       285 ~h~~  288 (301)
T cd07873         285 KHPY  288 (301)
T ss_pred             cCcc
Confidence            8643


No 221
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=100.00  E-value=6.4e-38  Score=267.59  Aligned_cols=206  Identities=24%  Similarity=0.373  Sum_probs=169.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++..++..++||||+++++|.+++..  ..+++..+..++.|++.||.|||+.+   ++
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---iv  123 (277)
T cd06642          49 IQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER---KI  123 (277)
T ss_pred             HHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---ee
Confidence            67899999999999999999999999999999999999999998854  36899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       124 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~  201 (277)
T cd06642         124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN  201 (277)
T ss_pred             ccCCChheEEEeCCCCEEEccccccccccCcch--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999976543221  122345788999999999888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ...........       ..      ....+    ......+..+.+++.+||+.+|++||++.+++++.
T Consensus       202 ~~~~~~~~~~~-------~~------~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  254 (277)
T cd06642         202 SDLHPMRVLFL-------IP------KNSPP----TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK  254 (277)
T ss_pred             cccchhhHHhh-------hh------cCCCC----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence            65432211100       00      00011    11223456789999999999999999999999864


No 222
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=5.9e-38  Score=277.57  Aligned_cols=221  Identities=24%  Similarity=0.297  Sum_probs=163.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+.+++.++||||+++++++...+      ..|+||||+.+ +|.+.+..   .+++..+..++.|++.||.|||+.
T Consensus        67 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~  142 (359)
T cd07876          67 AYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSA  142 (359)
T ss_pred             HHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhC
Confidence            568999999999999999999987543      47999999965 67766632   478999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      +   |+||||||+||+++.++.+||+|||+++......   ......||..|+|||++.+..++.++|||||||++|+|+
T Consensus       143 ~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  216 (359)
T cd07876         143 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV  216 (359)
T ss_pred             C---cccCCCCHHHEEECCCCCEEEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHH
Confidence            8   9999999999999999999999999997643221   123356899999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchH------------Hh----hhhhhcccccc-----ccccCCcc---CCCCCHHHHHHHHHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLV------------EW----ARPHLGERRRF-----YRLIDPRL---EGHFSIKGAQKAAQLAA  211 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~------------~~----~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~li~  211 (306)
                      +|..||............            ..    ...........     .+......   ........+..+.+||.
T Consensus       217 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  296 (359)
T cd07876         217 KGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLS  296 (359)
T ss_pred             hCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHH
Confidence            999999865322110000            00    00000000000     00000000   00011122467899999


Q ss_pred             HcccCCCCCCCCHHHHHHHhC
Q 021891          212 HCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       212 ~~l~~~p~~Rps~~ell~~l~  232 (306)
                      +||+.||++|||+.|+++|..
T Consensus       297 ~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         297 KMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             HHhccCcccCCCHHHHhcCch
Confidence            999999999999999999753


No 223
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00  E-value=1.9e-37  Score=264.74  Aligned_cols=207  Identities=24%  Similarity=0.341  Sum_probs=172.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++++.|+||+++++++.+++..++||||+++++|.+++..  ..+++..+..++.|++.||.|||+.+   ++
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---iv  123 (277)
T cd06640          49 IQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEK---KI  123 (277)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            67899999999999999999999999999999999999999998854  35889999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++........  ......++..|+|||++.+..++.++|+|||||++|||++|..||
T Consensus       124 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~  201 (277)
T cd06640         124 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN  201 (277)
T ss_pred             CcCCChhhEEEcCCCCEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCC
Confidence            999999999999999999999999976543221  223345788899999998888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      ...........+                 ............+..+.+++.+||+.+|++||++.+++++..
T Consensus       202 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  255 (277)
T cd06640         202 SDMHPMRVLFLI-----------------PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF  255 (277)
T ss_pred             CCcChHhHhhhh-----------------hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence            754332111100                 001112233456778999999999999999999999998743


No 224
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00  E-value=4.4e-38  Score=275.42  Aligned_cols=213  Identities=20%  Similarity=0.258  Sum_probs=167.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |++|+.++..++|+||+++++++.+.+..++||||+++|+|.+++.+....+++..+..++.||+.||.|||+.+   |+
T Consensus        48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ii  124 (332)
T cd05623          48 FREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YV  124 (332)
T ss_pred             HHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eE
Confidence            678999999999999999999999999999999999999999999776667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+||+++.++.+||+|||++........ .......||+.|+|||++.     ...++.++|||||||++|||++
T Consensus       125 HrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~  203 (332)
T cd05623         125 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY  203 (332)
T ss_pred             ecCCCHHHEEECCCCCEEEeecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc
Confidence            999999999999999999999999876433221 2223357899999999986     3468899999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~ell~~l  231 (306)
                      |+.||........   .   .........+ . + +.    .....+.++.+|+.+||..++++  |+++.++++|-
T Consensus       204 g~~Pf~~~~~~~~---~---~~i~~~~~~~-~-~-p~----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~  267 (332)
T cd05623         204 GETPFYAESLVET---Y---GKIMNHKERF-Q-F-PA----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP  267 (332)
T ss_pred             CCCCCCCCCHHHH---H---HHHhCCCccc-c-C-CC----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence            9999975432111   0   0000000000 0 0 00    01123578899999999765544  68999999873


No 225
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00  E-value=4.7e-38  Score=269.59  Aligned_cols=209  Identities=28%  Similarity=0.372  Sum_probs=167.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++|+.++|+||+++++++..++..++||||+.+++|.+++... ...+++..+..++.|++.||.|||+.+   |
T Consensus        47 ~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i  123 (285)
T cd05632          47 ALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---T  123 (285)
T ss_pred             HHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            567999999999999999999999999999999999999999888654 346999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.++|+|||++........   .....|+..|+|||++.+..++.++|+|||||++|+|++|..|
T Consensus       124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P  200 (285)
T cd05632         124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP  200 (285)
T ss_pred             eecCCCHHHEEECCCCCEEEecCCcceecCCCCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876433211   1234689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~  230 (306)
                      |...........+.   ......       .    ..+....+..+.+|+.+||+.||++||+     +.+++++
T Consensus       201 ~~~~~~~~~~~~~~---~~~~~~-------~----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         201 FRGRKEKVKREEVD---RRVLET-------E----EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             CCCCCHHHHHHHHH---Hhhhcc-------c----cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            97543221111110   000000       0    0112223467889999999999999999     5566654


No 226
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00  E-value=1.3e-37  Score=267.81  Aligned_cols=209  Identities=25%  Similarity=0.386  Sum_probs=167.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++.++|+||+++++++..++..++||||+++++|..++.+....+++..+..++.|++.||.|||+.+   ++
T Consensus        56 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~  132 (292)
T cd06644          56 YMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---II  132 (292)
T ss_pred             HHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---ee
Confidence            678999999999999999999999999999999999999999888766667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+||+++.++.++|+|||++......  ........++..|+|||++.     ...++.++|||||||++|+|++
T Consensus       133 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~  210 (292)
T cd06644         133 HRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ  210 (292)
T ss_pred             ecCCCcceEEEcCCCCEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhc
Confidence            9999999999999999999999998753322  11123346788999999985     3457889999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |..||........  ....    .       ....+..  ..+...+.++.++|.+||+.||++||++.+++++
T Consensus       211 g~~p~~~~~~~~~--~~~~----~-------~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         211 IEPPHHELNPMRV--LLKI----A-------KSEPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             CCCCCccccHHHH--HHHH----h-------cCCCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            9999865432110  0000    0       0000000  0112234678899999999999999999999985


No 227
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=1.1e-37  Score=295.80  Aligned_cols=209  Identities=23%  Similarity=0.359  Sum_probs=162.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      |.+|+.+|++|+|||||+++++|...  ..+||||||+++++|.++|...   ...+++..++.|+.||+.||.|||+.+
T Consensus        59 ~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g  138 (1021)
T PTZ00266         59 LVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLK  138 (1021)
T ss_pred             HHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            67899999999999999999988653  5689999999999999998643   346999999999999999999999843


Q ss_pred             C----CCeEeccCCCCCeEEcC-----------------CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc
Q 021891           77 E----RPVIYRDFKTSNILLDA-----------------DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT  135 (306)
Q Consensus        77 ~----~~iiH~dlkp~Nill~~-----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  135 (306)
                      .    .+|+||||||+||||+.                 .+.+||+|||++.......   ......||+.|+|||++.+
T Consensus       139 ~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~g  215 (1021)
T PTZ00266        139 DGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLH  215 (1021)
T ss_pred             cccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhc
Confidence            1    33999999999999964                 2358999999998654322   1234568999999999864


Q ss_pred             --CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHc
Q 021891          136 --GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC  213 (306)
Q Consensus       136 --~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  213 (306)
                        ..++.++||||||||+|+|++|..||.......  .++    ..+...      .....     ...+.++.+||..|
T Consensus       216 e~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~--qli----~~lk~~------p~lpi-----~~~S~eL~dLI~~~  278 (1021)
T PTZ00266        216 ETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS--QLI----SELKRG------PDLPI-----KGKSKELNILIKNL  278 (1021)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH--HHH----HHHhcC------CCCCc-----CCCCHHHHHHHHHH
Confidence              458899999999999999999999997543211  111    011000      00000     11246889999999


Q ss_pred             ccCCCCCCCCHHHHHHH
Q 021891          214 LSRDPKARPLMSEVVEA  230 (306)
Q Consensus       214 l~~~p~~Rps~~ell~~  230 (306)
                      |..+|.+||++.+++.+
T Consensus       279 L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        279 LNLSAKERPSALQCLGY  295 (1021)
T ss_pred             hcCChhHCcCHHHHhcc
Confidence            99999999999999964


No 228
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00  E-value=1.1e-37  Score=262.99  Aligned_cols=209  Identities=32%  Similarity=0.498  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.++|+||+++++++.+.+..++||||+++++|.+++...... +++..++.++.|++.||.|||+.+   +
T Consensus        48 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~  124 (258)
T smart00219       48 FLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---F  124 (258)
T ss_pred             HHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---e
Confidence            678999999999999999999999999999999999999999998765433 899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.++|+|||++............ ...++..|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       125 ~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~  203 (258)
T smart00219      125 IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGES  203 (258)
T ss_pred             eecccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876543222211 2336788999999988889999999999999999998 778


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||.......   ......    ...   .   .    ......+.++.+++.+||..||++|||+.++++.|
T Consensus       204 p~~~~~~~~---~~~~~~----~~~---~---~----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      204 PYPGMSNEE---VLEYLK----KGY---R---L----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCCCCHHH---HHHHHh----cCC---C---C----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            876532211   111100    000   0   0    01112457899999999999999999999999864


No 229
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00  E-value=7.7e-38  Score=264.66  Aligned_cols=211  Identities=27%  Similarity=0.407  Sum_probs=170.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++|+||+++++++......++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+   +
T Consensus        48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i  124 (261)
T cd05034          48 FLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---Y  124 (261)
T ss_pred             HHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            6789999999999999999999998889999999999999999997653 56899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.+||+|||++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |+.
T Consensus       125 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~  203 (261)
T cd05034         125 IHRDLAARNILVGENLVCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRV  203 (261)
T ss_pred             ccCCcchheEEEcCCCCEEECccccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987654321 111122234567999999998889999999999999999998 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||.......   ......    .      ......    +...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus       204 p~~~~~~~~---~~~~~~----~------~~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         204 PYPGMTNRE---VLEQVE----R------GYRMPR----PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCHHH---HHHHHH----c------CCCCCC----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            986543211   111100    0      000011    11225688999999999999999999999998764


No 230
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00  E-value=4.9e-38  Score=266.51  Aligned_cols=210  Identities=30%  Similarity=0.479  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +++|++++++++|+||+++++++.+.+..++|+||+++++|.+++.+.. .+++..+..++.|++.||+|||+.+   ++
T Consensus        49 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---i~  124 (265)
T cd06631          49 LQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNC---VV  124 (265)
T ss_pred             HHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            6789999999999999999999999999999999999999999996543 6899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCC----cceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                      |+||+|+||+++.++.++|+|||++.......    .........|+..|+|||++.+..++.++|||||||++|+|++|
T Consensus       125 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g  204 (265)
T cd06631         125 HRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATG  204 (265)
T ss_pred             cCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhC
Confidence            99999999999999999999999987642211    11112234688899999999988899999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ..||.........     ..  ....    ....+..    +...+..+.++|.+||+.+|.+||++.+++++
T Consensus       205 ~~p~~~~~~~~~~-----~~--~~~~----~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         205 KPPLASMDRLAAM-----FY--IGAH----RGLMPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             CCccccCChHHHH-----HH--hhhc----cCCCCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            9999654221110     00  0000    0001111    22235678999999999999999999999875


No 231
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00  E-value=3.7e-38  Score=278.48  Aligned_cols=221  Identities=24%  Similarity=0.289  Sum_probs=163.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+.+++.++||||+++++++....      ..++||||+++ +|.+.+..   .+++..+..++.|++.||.|||+.
T Consensus        63 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~  138 (355)
T cd07874          63 AYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA  138 (355)
T ss_pred             HHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC
Confidence            467999999999999999999886543      57999999965 77776632   478999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      +   |+||||||+||+++.++.+||+|||+++......   ......||..|+|||++.+..++.++|||||||++|+|+
T Consensus       139 g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~  212 (355)
T cd07874         139 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV  212 (355)
T ss_pred             C---cccCCCChHHEEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence            8   9999999999999999999999999998653321   223456899999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHH----------------hhhhhhccccccc-----cccCCcc---CCCCCHHHHHHHHHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLVE----------------WARPHLGERRRFY-----RLIDPRL---EGHFSIKGAQKAAQLAA  211 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~li~  211 (306)
                      +|..||.............                .............     .......   ........+..+.+||.
T Consensus       213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  292 (355)
T cd07874         213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS  292 (355)
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHH
Confidence            9999997643221100000                0000000000000     0000000   00111123467899999


Q ss_pred             HcccCCCCCCCCHHHHHHHhC
Q 021891          212 HCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       212 ~~l~~~p~~Rps~~ell~~l~  232 (306)
                      +||+.||++|||+.|+++|..
T Consensus       293 ~mL~~dP~~Rps~~ell~hp~  313 (355)
T cd07874         293 KMLVIDPAKRISVDEALQHPY  313 (355)
T ss_pred             HHhcCCchhcCCHHHHhcCcc
Confidence            999999999999999999743


No 232
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00  E-value=3.9e-38  Score=270.34  Aligned_cols=222  Identities=25%  Similarity=0.296  Sum_probs=163.3

Q ss_pred             HHHHHHHHhcC---CCCcccceeeEEEeC-----CeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDL---VHLNLVKLIGYCIED-----DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l---~H~niv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      +.+|+++++.+   +||||+++++++...     ...++||||+. ++|.+++... ...+++..+..++.|++.||.||
T Consensus        46 ~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l  124 (288)
T cd07863          46 TVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFL  124 (288)
T ss_pred             HHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            35678777765   799999999988652     45799999997 4898888654 34589999999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      |+.+   ++||||||+||+++.++.+||+|||+++.......   .....|+..|+|||++.+..++.++|||||||++|
T Consensus       125 H~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~  198 (288)
T cd07863         125 HANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA  198 (288)
T ss_pred             HhCC---eecCCCCHHHEEECCCCCEEECccCccccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHH
Confidence            9998   99999999999999999999999999986543221   22346788999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcchHHhhh-----hhhcccccc-ccccCCc---cCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 021891          153 EMLTGRRSMDKNRPNGEHNLVEWAR-----PHLGERRRF-YRLIDPR---LEGHFSIKGAQKAAQLAAHCLSRDPKARPL  223 (306)
Q Consensus       153 elltg~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  223 (306)
                      +|++|.+||...........+....     ..+...... ...+.+.   .........+..+.+|+.+||+.||++|||
T Consensus       199 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  278 (288)
T cd07863         199 EMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS  278 (288)
T ss_pred             HHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC
Confidence            9999999997543322111110000     000000000 0000000   000111234567899999999999999999


Q ss_pred             HHHHHHH
Q 021891          224 MSEVVEA  230 (306)
Q Consensus       224 ~~ell~~  230 (306)
                      +.|++.|
T Consensus       279 ~~~~l~h  285 (288)
T cd07863         279 AFRALQH  285 (288)
T ss_pred             HHHHhcC
Confidence            9999976


No 233
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00  E-value=7.3e-39  Score=279.46  Aligned_cols=220  Identities=27%  Similarity=0.448  Sum_probs=180.4

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCC-CHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL-PWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l-~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +|.+|+++|.+|+|||||+++|+|..++.+++|+||++.|+|.+++.++..+. ..+.-..++.||+.||+||.+.+   
T Consensus       581 ~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---  657 (807)
T KOG1094|consen  581 DFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---  657 (807)
T ss_pred             HHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---
Confidence            48999999999999999999999999999999999999999999998774333 55666789999999999999998   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh--C
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT--G  157 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g  157 (306)
                      +|||||.+.|+|++.++++||+|||+++.+..++........+-..+|||+|.+.-++++.++|||+||+++||+++  .
T Consensus       658 fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~  737 (807)
T KOG1094|consen  658 FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCR  737 (807)
T ss_pred             hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHh
Confidence            99999999999999999999999999998766666666656666789999999999999999999999999999755  6


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ..||.......   .++.....+.....       ...-..+..++..+.++|.+||..+-++|||++++..+|..
T Consensus       738 e~Py~~lt~e~---vven~~~~~~~~~~-------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  738 EQPYSQLTDEQ---VVENAGEFFRDQGR-------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             hCchhhhhHHH---HHHhhhhhcCCCCc-------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            67887654332   22222222211111       11112234557899999999999999999999999988764


No 234
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00  E-value=9e-38  Score=266.23  Aligned_cols=207  Identities=27%  Similarity=0.398  Sum_probs=170.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++.++...++|+||+++++|.+++...  .+++..++.++.|++.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~---i~  120 (274)
T cd06609          46 IQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG---KI  120 (274)
T ss_pred             HHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            678999999999999999999999999999999999999999998654  7899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||+++......  .......++..|+|||.+.+..++.++|||||||++|+|++|..||
T Consensus       121 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~  198 (274)
T cd06609         121 HRDIKAANILLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPL  198 (274)
T ss_pred             cCCCCHHHEEECCCCCEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            99999999999999999999999998764332  1223456788999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ...........   ..          ....+.....   ..+..+.+++.+||..+|++|||+++++++-
T Consensus       199 ~~~~~~~~~~~---~~----------~~~~~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~  252 (274)
T cd06609         199 SDLHPMRVLFL---IP----------KNNPPSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKHK  252 (274)
T ss_pred             ccCchHHHHHH---hh----------hcCCCCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhCh
Confidence            75432111000   00          0011111111   1356789999999999999999999999853


No 235
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00  E-value=4.8e-38  Score=268.73  Aligned_cols=210  Identities=25%  Similarity=0.381  Sum_probs=169.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++..+...++||||+++++|.+++.+....+++..++.++.|++.||.|||+.+   ++
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~  125 (280)
T cd06611          49 FMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VI  125 (280)
T ss_pred             HHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            678999999999999999999999999999999999999999999776667999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ellt  156 (306)
                      |+||||+||+++.++.++|+|||++........  ......|+..|+|||++.     ...++.++|||||||++|+|++
T Consensus       126 h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~  203 (280)
T cd06611         126 HRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQ  203 (280)
T ss_pred             cCCCChhhEEECCCCCEEEccCccchhhccccc--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHh
Confidence            999999999999999999999999876433211  223356888999999975     3457789999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |..||........  ....     ..      ...+..  ..+...+.++.+++.+||+.+|.+||++.+++++-
T Consensus       204 g~~p~~~~~~~~~--~~~~-----~~------~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  263 (280)
T cd06611         204 MEPPHHELNPMRV--LLKI-----LK------SEPPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHP  263 (280)
T ss_pred             CCCCcccCCHHHH--HHHH-----hc------CCCCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcCh
Confidence            9999975432111  0000     00      000000  01112346788999999999999999999999863


No 236
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=1.4e-37  Score=266.42  Aligned_cols=214  Identities=26%  Similarity=0.437  Sum_probs=171.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~i   80 (306)
                      |.+|+++++.++||||+++++++...+..++||||+++++|.+++.+. ..+++..+..++.+++.||.|||+ .+   +
T Consensus        50 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~---i  125 (284)
T cd06620          50 ILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHR---I  125 (284)
T ss_pred             HHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcC---e
Confidence            678999999999999999999999999999999999999999988554 468999999999999999999997 46   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||||+||+++.++.++|+|||++......    ......|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       126 ~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p  201 (284)
T cd06620         126 MHRDIKPSNILVNSRGQIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP  201 (284)
T ss_pred             eccCCCHHHEEECCCCcEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998654222    12235689999999999888899999999999999999999999


Q ss_pred             CCCCCCCCC-----cchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          161 MDKNRPNGE-----HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       161 f~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      |........     .............       ..+...   ....+..+.+|+.+||+.||++|||+.|++++..-
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         202 FAFSNIDDDGQDDPMGILDLLQQIVQE-------PPPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             CcccchhhhhhhhhhHHHHHHHHHhhc-------cCCCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            986543211     1111111111100       001110   11245678999999999999999999999997543


No 237
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=5.1e-38  Score=278.44  Aligned_cols=221  Identities=23%  Similarity=0.278  Sum_probs=163.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+.+++.++||||+++++++...      ...|+||||+++ +|.+.+..   .+++..+..++.|++.||.|||+.
T Consensus        70 ~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~  145 (364)
T cd07875          70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA  145 (364)
T ss_pred             HHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhC
Confidence            56899999999999999999987643      357999999964 78777742   478999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      +   |+||||||+||+++.++.+||+|||+++......   ......||..|+|||++.+..++.++|||||||++|+|+
T Consensus       146 ~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  219 (364)
T cd07875         146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI  219 (364)
T ss_pred             C---eecCCCCHHHEEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHH
Confidence            8   9999999999999999999999999998653321   123356899999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHh------------h----hhhhccccccc-----cccCC---ccCCCCCHHHHHHHHHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLVEW------------A----RPHLGERRRFY-----RLIDP---RLEGHFSIKGAQKAAQLAA  211 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~------------~----~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~li~  211 (306)
                      +|+.||...........+..            .    .........+.     .....   .............+.+||.
T Consensus       220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~  299 (364)
T cd07875         220 KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS  299 (364)
T ss_pred             hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHH
Confidence            99999976543211110000            0    00000000000     00000   0000111122457899999


Q ss_pred             HcccCCCCCCCCHHHHHHHhC
Q 021891          212 HCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       212 ~~l~~~p~~Rps~~ell~~l~  232 (306)
                      +||+.||.+|||+.++++|..
T Consensus       300 ~mL~~dP~~R~t~~e~L~hp~  320 (364)
T cd07875         300 KMLVIDASKRISVDEALQHPY  320 (364)
T ss_pred             HhcCcCcccCCCHHHHhcCcc
Confidence            999999999999999998743


No 238
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=9.5e-38  Score=286.53  Aligned_cols=225  Identities=19%  Similarity=0.224  Sum_probs=163.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS----LPLPWSIRMKIALGAAKGLAFLHEEAE   77 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~~   77 (306)
                      |++|+++|++++|+|||++++++...+..|+|++++. ++|.+++....    .......+..++.||+.||.|||+.+ 
T Consensus       210 ~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-  287 (501)
T PHA03210        210 LENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-  287 (501)
T ss_pred             HHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-
Confidence            6789999999999999999999999999999999995 57777765432    22345677889999999999999988 


Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                        |+||||||+|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|
T Consensus       288 --IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~  364 (501)
T PHA03210        288 --LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSH  364 (501)
T ss_pred             --eecCCCCHHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence              99999999999999999999999999987644322 122345789999999999999999999999999999999998


Q ss_pred             CCC-CCCCCCCCCcchHHhhhhhhcccc-------ccccccCCc----cCCCC-----CHHHHHHHHHHHHHcccCCCCC
Q 021891          158 RRS-MDKNRPNGEHNLVEWARPHLGERR-------RFYRLIDPR----LEGHF-----SIKGAQKAAQLAAHCLSRDPKA  220 (306)
Q Consensus       158 ~~p-f~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~-----~~~~~~~~~~li~~~l~~~p~~  220 (306)
                      ..+ +.......................       .+...++..    ....+     ....+.++.++|.+||+.||.+
T Consensus       365 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~  444 (501)
T PHA03210        365 DFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHL  444 (501)
T ss_pred             CCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCccc
Confidence            754 433222111111111110000000       000000000    00000     0012356788999999999999


Q ss_pred             CCCHHHHHHHh
Q 021891          221 RPLMSEVVEAL  231 (306)
Q Consensus       221 Rps~~ell~~l  231 (306)
                      |||+.|++++.
T Consensus       445 Rpsa~elL~hp  455 (501)
T PHA03210        445 RPGAAELLALP  455 (501)
T ss_pred             CcCHHHHhhCh
Confidence            99999999864


No 239
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00  E-value=1e-38  Score=259.71  Aligned_cols=224  Identities=24%  Similarity=0.315  Sum_probs=167.7

Q ss_pred             HHHHHHhcCCCCcccceeeEEEe-CCeeEEEEEcCCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFR----RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~----~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +|+.+++.|+||||+.+..+|.. +...++++||++. +|...|.-    ..+.++...+..++.||+.|+.|||++-  
T Consensus        76 REiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--  152 (438)
T KOG0666|consen   76 REIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--  152 (438)
T ss_pred             HHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--
Confidence            79999999999999999999988 7789999999976 89888853    2356999999999999999999999977  


Q ss_pred             CeEeccCCCCCeEEcCC----CcEEEeccCCcccCCCCCcce-eeecccccccccCCcchhcC-CCCchhHHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDAD----YNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLL  152 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~  152 (306)
                       |+||||||.||++..+    |.|||+|||+++.+...-... .....+-|.+|+|||++.|. .|+.+.|||++|||+.
T Consensus       153 -vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfa  231 (438)
T KOG0666|consen  153 -VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFA  231 (438)
T ss_pred             -eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHH
Confidence             9999999999999877    999999999999876654443 23446679999999999864 7999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcc------hHHhhhhhh-----ccccccccc---------cCCccCCCCC--------HHHHH
Q 021891          153 EMLTGRRSMDKNRPNGEHN------LVEWARPHL-----GERRRFYRL---------IDPRLEGHFS--------IKGAQ  204 (306)
Q Consensus       153 elltg~~pf~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~---------~~~~~~~~~~--------~~~~~  204 (306)
                      ||+|..+.|.+........      .+......+     ..+..+..+         +........+        ..-++
T Consensus       232 ElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~  311 (438)
T KOG0666|consen  232 ELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDP  311 (438)
T ss_pred             HHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCc
Confidence            9999999887643322111      000000000     000000000         0000000000        00123


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          205 KAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ...+|+.+||+.||.+|.|+++.+++.
T Consensus       312 ~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  312 SALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             hHHHHHHHHhccCchhhccHHHHhccc
Confidence            478999999999999999999999875


No 240
>PTZ00284 protein kinase; Provisional
Probab=100.00  E-value=6.2e-38  Score=286.37  Aligned_cols=222  Identities=18%  Similarity=0.249  Sum_probs=161.1

Q ss_pred             HHHHHHHHhcCCCC------cccceeeEEEeC-CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            2 WQAEVNFLGDLVHL------NLVKLIGYCIED-DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         2 ~~~E~~il~~l~H~------niv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      ++.|+++++.++|.      +|+++++++... ++.|+|||++ +++|.+++.+. ..+++..+..++.||+.||.|||+
T Consensus       172 ~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~  249 (467)
T PTZ00284        172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHT  249 (467)
T ss_pred             HHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            45688888877554      588899988764 4789999998 67899888655 369999999999999999999997


Q ss_pred             -CCCCCeEeccCCCCCeEEcCCC----------------cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC
Q 021891           75 -EAERPVIYRDFKTSNILLDADY----------------NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH  137 (306)
Q Consensus        75 -~~~~~iiH~dlkp~Nill~~~~----------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  137 (306)
                       .+   |+||||||+|||++.++                .+||+|||.+.....     ......||..|+|||++.+..
T Consensus       250 ~~g---IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~  321 (467)
T PTZ00284        250 ELH---LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLG  321 (467)
T ss_pred             cCC---eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCC
Confidence             47   99999999999998765                499999998864322     123467899999999999999


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhh----hc-------------cccccccccCCccC-----
Q 021891          138 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH----LG-------------ERRRFYRLIDPRLE-----  195 (306)
Q Consensus       138 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~----~~-------------~~~~~~~~~~~~~~-----  195 (306)
                      |+.++|||||||++|||++|+.||......+....+......    +.             ....+....++...     
T Consensus       322 ~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (467)
T PTZ00284        322 WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIAR  401 (467)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhc
Confidence            999999999999999999999999765432221111110000    00             00000000000000     


Q ss_pred             --CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          196 --GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       196 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                        ..........+.+||.+||++||++|||++|+++|..-
T Consensus       402 ~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~  441 (467)
T PTZ00284        402 ARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV  441 (467)
T ss_pred             ccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence              00001123568899999999999999999999997543


No 241
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=100.00  E-value=1.2e-37  Score=264.48  Aligned_cols=212  Identities=23%  Similarity=0.395  Sum_probs=170.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |++|+++++.++|+||+++++++.+.+..++|+||+.+++|.+++.+. ..+++..+..++.|++.||.|||+.+   ++
T Consensus        50 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~---i~  125 (268)
T cd06630          50 LRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ---II  125 (268)
T ss_pred             HHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            678999999999999999999999999999999999999999998654 36899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCC-cEEEeccCCcccCCCCCc--ceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADY-NAKLSDFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||+|+||+++.++ .+||+|||++........  ........|+..|+|||.+.+..++.++|||||||++++|++|.
T Consensus       126 H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~  205 (268)
T cd06630         126 HRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK  205 (268)
T ss_pred             cCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCC
Confidence            999999999998776 599999999877543211  11123356788999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||...........+..             ..........+...+.++.+++.+||..+|++||++.+++++
T Consensus       206 ~p~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         206 PPWNAEKHSNHLALIFK-------------IASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             CCCCCCCCcchHHHHHH-------------HhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            99965432211111100             000001112333456789999999999999999999999975


No 242
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00  E-value=2.8e-38  Score=255.89  Aligned_cols=214  Identities=23%  Similarity=0.266  Sum_probs=170.3

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEe----CCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIE----DDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      ++|+++.-.. .|||||+++++|+.    .+-+.+|||.++||.|...+..++ +.+++.++..|++||..|+.|||+.+
T Consensus       102 RrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n  181 (400)
T KOG0604|consen  102 RREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN  181 (400)
T ss_pred             HhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence            5788887777 69999999998874    245679999999999999997764 56999999999999999999999999


Q ss_pred             CCCeEeccCCCCCeEEcC---CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                         |.||||||+|+|...   |..+||+|||.|+......   .....+-|+.|.|||++....|+..+|+||+|+++|-
T Consensus       182 ---IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYI  255 (400)
T KOG0604|consen  182 ---IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI  255 (400)
T ss_pred             ---hhhccCChhheeeecCCCCcceEecccccccccCCCc---cccCCcccccccCHHHhCchhcCCCCCccchhHHHHH
Confidence               999999999999954   5578999999998754322   2334567999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |++|.+||..........-+....     +...+.+.++.     ....++...++|+++|..+|.+|.|+.++++|.+
T Consensus       256 lLCGyPPFYS~hg~aispgMk~rI-----~~gqy~FP~pE-----Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpw  324 (400)
T KOG0604|consen  256 LLCGYPPFYSNHGLAISPGMKRRI-----RTGQYEFPEPE-----WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPW  324 (400)
T ss_pred             hhcCCCcccccCCccCChhHHhHh-----hccCccCCChh-----HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence            999999998654322111111000     00112222222     2356889999999999999999999999999865


No 243
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00  E-value=1.3e-37  Score=262.68  Aligned_cols=207  Identities=24%  Similarity=0.350  Sum_probs=167.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe-CCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++|+||+++++.+.. +...++||||+++++|.+.+... ...+++.+++.++.|++.||.+||+.+   
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---  122 (257)
T cd08223          46 AEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---  122 (257)
T ss_pred             HHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            5789999999999999999998764 44678999999999999998764 446899999999999999999999998   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      ++|+||||+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|||||||++++|++|..
T Consensus       123 i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08223         123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKH  200 (257)
T ss_pred             eeccCCCchhEEEecCCcEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999876533211  2233567889999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ||......      .........      .. +    ..+...+..+.+++.+||+.||++|||+.+++++
T Consensus       201 ~~~~~~~~------~~~~~~~~~------~~-~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         201 AFNAKDMN------SLVYRIIEG------KL-P----PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCCCCCHH------HHHHHHHhc------CC-C----CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            98643211      111100000      00 0    1122345789999999999999999999999986


No 244
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00  E-value=1.4e-37  Score=262.97  Aligned_cols=210  Identities=26%  Similarity=0.388  Sum_probs=168.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|++++++++|+||+++++++. .+..++||||+.+++|.+++... +..+++..+..++.|++.||+|||+.+   +
T Consensus        48 ~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i  123 (260)
T cd05067          48 FLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---Y  123 (260)
T ss_pred             HHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---e
Confidence            678999999999999999999874 56789999999999999988653 456899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.++|+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |..
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~  202 (260)
T cd05067         124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRI  202 (260)
T ss_pred             ecccccHHhEEEcCCCCEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999976543221 11222345678999999988889999999999999999999 999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||........   ....    ..      .....    .+...+.++.+++.+||+.+|++|||++++++.|+.
T Consensus       203 p~~~~~~~~~---~~~~----~~------~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         203 PYPGMTNPEV---IQNL----ER------GYRMP----RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCChHHH---HHHH----Hc------CCCCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            9975432111   1100    00      00011    111234689999999999999999999999998864


No 245
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00  E-value=5.5e-38  Score=273.76  Aligned_cols=199  Identities=24%  Similarity=0.329  Sum_probs=160.5

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +..|.+++..+. |++|+++++++.+.+..|+||||+++|+|.+++.+. ..+++..+..++.||+.||.|||+.+   +
T Consensus        47 ~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~---i  122 (323)
T cd05615          47 TMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRG---I  122 (323)
T ss_pred             HHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            457888888885 577889999999999999999999999999988554 36999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +||||||+||+++.++.+||+|||+++.......  ......||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       123 vHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p  200 (323)
T cd05615         123 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP  200 (323)
T ss_pred             eccCCCHHHeEECCCCCEEEeccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCC
Confidence            9999999999999999999999999875432211  22345689999999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      |........   .....   ..        ..    .++...+.++.+++.+||+.+|.+|++.
T Consensus       201 f~~~~~~~~---~~~i~---~~--------~~----~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         201 FDGEDEDEL---FQSIM---EH--------NV----SYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             CCCCCHHHH---HHHHH---hC--------CC----CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            976432111   11000   00        00    1112234678999999999999999975


No 246
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=1.4e-37  Score=268.12  Aligned_cols=208  Identities=24%  Similarity=0.362  Sum_probs=169.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++...+..++|+||+++++|.+++...  .+++.++..++.|++.||.|||+.+   ++
T Consensus        63 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~---i~  137 (296)
T cd06655          63 IINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQ---VI  137 (296)
T ss_pred             HHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            578999999999999999999999999999999999999999988543  5899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||||+||+++.++.+||+|||++........  ......|+..|+|||.+.+..++.++|||||||++|+|++|..||
T Consensus       138 H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf  215 (296)
T cd06655         138 HRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (296)
T ss_pred             cCCCCHHHEEECCCCCEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876543221  122346788999999998888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ...........   ..   ....       +..  ..+...+..+.++|.+||..||.+|||+.+++++-
T Consensus       216 ~~~~~~~~~~~---~~---~~~~-------~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~  270 (296)
T cd06655         216 LNENPLRALYL---IA---TNGT-------PEL--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP  270 (296)
T ss_pred             CCCCHHHHHHH---HH---hcCC-------ccc--CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence            76433211100   00   0000       000  01122346788999999999999999999999853


No 247
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00  E-value=2.4e-37  Score=262.80  Aligned_cols=210  Identities=24%  Similarity=0.374  Sum_probs=166.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL--PWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l--~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |.+|+++++.++|+||+++++++..++..++|+||+++++|.+++......+  ++..+..++.||+.||.|||+.+   
T Consensus        52 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---  128 (268)
T cd06624          52 LHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---  128 (268)
T ss_pred             HHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---
Confidence            6789999999999999999999999999999999999999999997654445  88889999999999999999988   


Q ss_pred             eEeccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC--CCCchhHHHHHHHHHHHHHh
Q 021891           80 VIYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        80 iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ellt  156 (306)
                      |+||||||+||+++. ++.++|+|||++........  ......|+..|+|||++...  .++.++||||||+++|+|++
T Consensus       129 i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~  206 (268)
T cd06624         129 IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT  206 (268)
T ss_pred             EeecCCCHHHEEEcCCCCeEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh
Confidence            999999999999976 67999999999876533221  12234578899999998654  47899999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |..||........   ..+.....       . ..+    .++...+.++.+++.+||+.+|.+|||+.+++++.
T Consensus       207 g~~p~~~~~~~~~---~~~~~~~~-------~-~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  266 (268)
T cd06624         207 GKPPFIELGEPQA---AMFKVGMF-------K-IHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP  266 (268)
T ss_pred             CCCCCccccChhh---hHhhhhhh-------c-cCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence            9999865322111   00000000       0 011    12223456889999999999999999999999863


No 248
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00  E-value=1.2e-37  Score=266.93  Aligned_cols=223  Identities=26%  Similarity=0.318  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++......++||||+++++|..++.. ...+++..+..++.|++.||.|||+.+   ++
T Consensus        47 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~  122 (286)
T cd07847          47 ALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHN---CI  122 (286)
T ss_pred             HHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ce
Confidence            56899999999999999999999999999999999998888776643 346899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||||+||+++.++.++|+|||++........  ......++..|+|||.+.+ ..++.++||||||+++|+|++|..|
T Consensus       123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p  200 (286)
T cd07847         123 HRDVKPENILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL  200 (286)
T ss_pred             ecCCChhhEEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987644322  1223457888999999875 4678999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhh-c------cccccc-cccCCccCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHL-G------ERRRFY-RLIDPRLEGH-----FSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~-~------~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      |......+....+....... .      ....+. ....+.....     .....+..+.+|+.+||+.+|++|||+.|+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  280 (286)
T cd07847         201 WPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL  280 (286)
T ss_pred             CCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH
Confidence            97654322111110000000 0      000000 0000000000     001235678999999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      +.+
T Consensus       281 l~~  283 (286)
T cd07847         281 LEH  283 (286)
T ss_pred             hcC
Confidence            975


No 249
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00  E-value=1.2e-37  Score=265.17  Aligned_cols=208  Identities=28%  Similarity=0.380  Sum_probs=164.7

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeC------CeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIED------DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      +.+|+.+++++ +|+||+++++++...      ...++||||+++++|.+++... ...+++..+..++.|++.||.|||
T Consensus        49 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH  128 (272)
T cd06637          49 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH  128 (272)
T ss_pred             HHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            57899999998 799999999998763      4689999999999999998764 346899999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFG  148 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG  148 (306)
                      +.+   ++|+||||+||+++.++.++|+|||++........  ......|+..|+|||++.     ...++.++||||||
T Consensus       129 ~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  203 (272)
T cd06637         129 QHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG  203 (272)
T ss_pred             HCC---CccCCCCHHHEEECCCCCEEEccCCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence            988   99999999999999999999999999876433211  223456889999999986     34688899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          149 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       149 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |++|||++|..||.........     ....   ..     .....   .....+..+.+|+.+||..||.+|||+.+++
T Consensus       204 v~l~el~~g~~p~~~~~~~~~~-----~~~~---~~-----~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il  267 (272)
T cd06637         204 ITAIEMAEGAPPLCDMHPMRAL-----FLIP---RN-----PAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLM  267 (272)
T ss_pred             HHHHHHHhCCCCccccCHHHHH-----HHHh---cC-----CCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            9999999999999654321110     0000   00     00000   1112346789999999999999999999999


Q ss_pred             HH
Q 021891          229 EA  230 (306)
Q Consensus       229 ~~  230 (306)
                      ++
T Consensus       268 ~~  269 (272)
T cd06637         268 KH  269 (272)
T ss_pred             hC
Confidence            85


No 250
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00  E-value=1.7e-37  Score=264.17  Aligned_cols=214  Identities=27%  Similarity=0.463  Sum_probs=169.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++|+||+++++++...+..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+   ++
T Consensus        55 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~  130 (272)
T cd06629          55 LRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKG---IL  130 (272)
T ss_pred             HHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---ee
Confidence            567999999999999999999999999999999999999999998665 47899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC--CCchhHHHHHHHHHHHHHhCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~elltg~~  159 (306)
                      |+||+|+||+++.++.++|+|||++................|+..|+|||.+....  ++.++|+||||+++|+|++|..
T Consensus       131 H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~  210 (272)
T cd06629         131 HRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR  210 (272)
T ss_pred             ecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCC
Confidence            99999999999999999999999997654322222223356788999999987654  7899999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||.......     ....  ....     ..............+..+.+++.+||..+|++|||+.+++++.
T Consensus       211 p~~~~~~~~-----~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  270 (272)
T cd06629         211 PWSDEEAIA-----AMFK--LGNK-----RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHP  270 (272)
T ss_pred             CCcCcchHH-----HHHH--hhcc-----ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence            986432211     0000  0000     0011111112223457899999999999999999999999863


No 251
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00  E-value=2e-37  Score=262.07  Aligned_cols=210  Identities=26%  Similarity=0.400  Sum_probs=168.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+++++.++|+||+++++++.+ ...++||||+++++|.+++.+. ...+++..+..++.|++.||.|||+.+   +
T Consensus        48 ~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i  123 (260)
T cd05073          48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---Y  123 (260)
T ss_pred             HHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            6789999999999999999999887 7789999999999999999653 446788999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +|+||||+||+++.++.+||+|||++........ .......++..|+|||++....++.++|+|||||++|+|++ |..
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~  202 (260)
T cd05073         124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI  202 (260)
T ss_pred             cccccCcceEEEcCCCcEEECCCcceeeccCCCc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999976543221 12222345677999999988889999999999999999999 899


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||........   .....    ..      ....    .....+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       203 p~~~~~~~~~---~~~~~----~~------~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         203 PYPGMSNPEV---IRALE----RG------YRMP----RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCCCCCHHHH---HHHHh----CC------CCCC----CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9875432111   11100    00      0000    111234678999999999999999999999998864


No 252
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=100.00  E-value=7e-38  Score=275.45  Aligned_cols=219  Identities=22%  Similarity=0.304  Sum_probs=161.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+++|++++|+||+++++++...      ...+++++++ +++|.+++..  ..+++..+..++.||+.||.|||+.
T Consensus        61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~  137 (343)
T cd07878          61 TYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSA  137 (343)
T ss_pred             HHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            56899999999999999999987643      3568999998 7799887743  3599999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                      +   |+||||||+||+++.++.+||+|||+++.....     .....||..|+|||++.+ ..++.++|||||||++|+|
T Consensus       138 ~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  209 (343)
T cd07878         138 G---IIHRDLKPSNVAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL  209 (343)
T ss_pred             C---eecccCChhhEEECCCCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHH
Confidence            8   999999999999999999999999999865432     223468999999999876 5789999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhh--------hhh--ccccccccccCCccC---CCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWAR--------PHL--GERRRFYRLIDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|..||...........+....        ...  .....+...+.....   .......+..+.+|+.+||+.||++|
T Consensus       210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R  289 (343)
T cd07878         210 LKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKR  289 (343)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhC
Confidence            99999997643211110000000        000  000000000000000   00000123467899999999999999


Q ss_pred             CCHHHHHHHh
Q 021891          222 PLMSEVVEAL  231 (306)
Q Consensus       222 ps~~ell~~l  231 (306)
                      ||+.|+++|-
T Consensus       290 ~s~~ell~hp  299 (343)
T cd07878         290 ISASEALAHP  299 (343)
T ss_pred             CCHHHHhcCc
Confidence            9999999864


No 253
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00  E-value=1.6e-37  Score=264.74  Aligned_cols=211  Identities=25%  Similarity=0.409  Sum_probs=168.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC--------CCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--------LPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--------~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      |.+|++++++++|+||+++++++.+.+..++||||+++++|.+++....        ..+++..+..++.|++.||.|||
T Consensus        55 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH  134 (275)
T cd05046          55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS  134 (275)
T ss_pred             HHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh
Confidence            7889999999999999999999999899999999999999999986543        15899999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      +.+   ++||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|+
T Consensus       135 ~~~---i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  210 (275)
T cd05046         135 NAR---FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWE  210 (275)
T ss_pred             hcC---cccCcCccceEEEeCCCcEEEcccccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHH
Confidence            988   99999999999999999999999999875432211 11223345677999999988888999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          154 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       154 llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |++ |..||.......   ......    . ....        .......+..+.+++.+||+.+|.+|||+.++++.|.
T Consensus       211 l~~~~~~p~~~~~~~~---~~~~~~----~-~~~~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         211 VFTQGELPFYGLSDEE---VLNRLQ----A-GKLE--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHhCCCCCccccchHH---HHHHHH----c-CCcC--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            999 778886433211   111100    0 0000        0011123468899999999999999999999999875


No 254
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00  E-value=9.4e-38  Score=264.66  Aligned_cols=211  Identities=30%  Similarity=0.427  Sum_probs=170.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~i   80 (306)
                      +.+|++++++++||||+++++++...+..++|+||+++++|.+++......+++..+..++.|++.||.|||+ .+   +
T Consensus        46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i  122 (265)
T cd06605          46 ILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---I  122 (265)
T ss_pred             HHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---e
Confidence            6789999999999999999999999999999999999999999997665689999999999999999999999 88   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||||+||+++.++.++|+|||.+........    ....++..|+|||.+.+..++.++||||||+++|+|++|..|
T Consensus       123 ~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  198 (265)
T cd06605         123 IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP  198 (265)
T ss_pred             ecCCCCHHHEEECCCCCEEEeecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876432211    125678899999999988999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |......... ..........       ...+...   ....+..+.++|.+||..||++|||+.+++.+
T Consensus       199 ~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         199 YPPENDPPDG-IFELLQYIVN-------EPPPRLP---SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             CCcccccccc-HHHHHHHHhc-------CCCCCCC---hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            9754321111 1111111000       0001111   11145779999999999999999999999985


No 255
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=1.2e-37  Score=267.14  Aligned_cols=209  Identities=26%  Similarity=0.419  Sum_probs=167.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhc-CCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHE-EAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~   78 (306)
                      |.+|++++++++|+||+++++.+...+..++||||+++++|..++...  ...+++..+..++.|++.||.|||+ .+  
T Consensus        46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--  123 (286)
T cd06622          46 IIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--  123 (286)
T ss_pred             HHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--
Confidence            678999999999999999999999999999999999999999988653  2368999999999999999999996 46  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC------CCCchhHHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG------HLTSRSDVYSFGVVLL  152 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~  152 (306)
                       ++|+||||+||+++.++.+||+|||++.......    .....++..|+|||.+.+.      .++.++|||||||++|
T Consensus       124 -i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~  198 (286)
T cd06622         124 -IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL  198 (286)
T ss_pred             -EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence             9999999999999999999999999987653221    2234578899999998643      3588999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +|++|..||.............             .... ......+...+.++.+||.+||+.+|++||++.+++++.
T Consensus       199 ~l~~g~~pf~~~~~~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~  263 (286)
T cd06622         199 EMALGRYPYPPETYANIFAQLS-------------AIVD-GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP  263 (286)
T ss_pred             HHHhCCCCCCCcchhhHHHHHH-------------HHhh-cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence            9999999996543211111100             0000 001112233567889999999999999999999999864


No 256
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=2.5e-37  Score=266.63  Aligned_cols=207  Identities=23%  Similarity=0.342  Sum_probs=168.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++|+||+++++++..++..++||||+++++|.+++.+.  .+++..+..++.|++.||.|||+.+   ++
T Consensus        63 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~---i~  137 (297)
T cd06656          63 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQ---VI  137 (297)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            568999999999999999999999999999999999999999998543  5789999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++|||||||++|+|++|..||
T Consensus       138 H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf  215 (297)
T cd06656         138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (297)
T ss_pred             cCCCCHHHEEECCCCCEEECcCccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876543221  122346788999999999888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .............      ...       .+.  ...+...+..+.+|+.+||+.+|++||++.+++++
T Consensus       216 ~~~~~~~~~~~~~------~~~-------~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         216 LNENPLRALYLIA------TNG-------TPE--LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CCCCcchheeeec------cCC-------CCC--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            7643322111000      000       000  00122335678899999999999999999999985


No 257
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00  E-value=9.8e-38  Score=274.34  Aligned_cols=211  Identities=25%  Similarity=0.403  Sum_probs=179.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |..|+-+|++++|||||+++|+|.+. ..|||||+++-|.|..++..+...++......++.||..||.|||+..   +|
T Consensus       438 flqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fV  513 (974)
T KOG4257|consen  438 FLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR---FV  513 (974)
T ss_pred             HHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc---hh
Confidence            78999999999999999999999754 689999999999999999998888999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      ||||...|||+.....+||+|||+++...+....... ...-...|||||-+....++.++|||.||+++||++. |..|
T Consensus       514 HRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkP  592 (974)
T KOG4257|consen  514 HRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKP  592 (974)
T ss_pred             hhhhhhhheeecCcceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCc
Confidence            9999999999999999999999999998776544333 2233567999999999999999999999999999865 8899


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      |.+....+..-.++       ++.          .-..+..++..++.|+.+||.++|.+||.+.+|...|..+
T Consensus       593 fqgvkNsDVI~~iE-------nGe----------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv  649 (974)
T KOG4257|consen  593 FQGVKNSDVIGHIE-------NGE----------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV  649 (974)
T ss_pred             cccccccceEEEec-------CCC----------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence            98876554432221       111          1123445678999999999999999999999999887543


No 258
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00  E-value=1.2e-37  Score=272.65  Aligned_cols=213  Identities=20%  Similarity=0.254  Sum_probs=167.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.++..++|+||+++++++.+++..|+||||+++|+|.+++.+....+++..+..++.|++.||.|||+.+   |+
T Consensus        48 ~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---ii  124 (331)
T cd05624          48 FREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YV  124 (331)
T ss_pred             HHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678899999999999999999999999999999999999999999775567999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-----CCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+||+++.++.+||+|||++........ .......||..|+|||++.+     ..++.++|||||||++|+|++
T Consensus       125 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~  203 (331)
T cd05624         125 HRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             eccCchHHEEEcCCCCEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhh
Confidence            999999999999999999999999976543322 12233568999999999875     467899999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA--RPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~ell~~l  231 (306)
                      |+.||........   ..   .......+   .   ..... ....+..+.+++.+||..++.+  |++++++++|.
T Consensus       204 g~~Pf~~~~~~~~---~~---~i~~~~~~---~---~~p~~-~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~  267 (331)
T cd05624         204 GETPFYAESLVET---YG---KIMNHEER---F---QFPSH-ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA  267 (331)
T ss_pred             CCCCccCCCHHHH---HH---HHHcCCCc---c---cCCCc-cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence            9999975432111   00   00000000   0   00000 1123568899999999876554  46888888764


No 259
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00  E-value=3.8e-37  Score=267.47  Aligned_cols=225  Identities=22%  Similarity=0.299  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|+++++.++|+||+++++++.+.+..+++|||+++++|.+++.+. ...+++..+..++.|++.||.|||+.+   |
T Consensus        46 ~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---i  122 (314)
T cd08216          46 LQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---F  122 (314)
T ss_pred             HHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            678999999999999999999999999999999999999999998754 446899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-----eeeecccccccccCCcchhc--CCCCchhHHHHHHHHHHH
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~e  153 (306)
                      +||||||+||+++.++.+||+|||.+.........     .......++..|+|||++.+  ..++.++|||||||++|+
T Consensus       123 vH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~e  202 (314)
T cd08216         123 IHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACE  202 (314)
T ss_pred             ecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHH
Confidence            99999999999999999999999988754322111     11123456778999999875  458899999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhhhhc---cc-------ccccc----ccC----CccCCCCCHHHHHHHHHHHHHccc
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARPHLG---ER-------RRFYR----LID----PRLEGHFSIKGAQKAAQLAAHCLS  215 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~----~~~----~~~~~~~~~~~~~~~~~li~~~l~  215 (306)
                      |++|..||........  ..........   ..       .....    ...    ...........+.++.+|+.+||+
T Consensus       203 l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  280 (314)
T cd08216         203 LANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQ  280 (314)
T ss_pred             HHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhh
Confidence            9999999976432211  0000000000   00       00000    000    001111233456789999999999


Q ss_pred             CCCCCCCCHHHHHHHh
Q 021891          216 RDPKARPLMSEVVEAL  231 (306)
Q Consensus       216 ~~p~~Rps~~ell~~l  231 (306)
                      .||++|||+.+++++.
T Consensus       281 ~~P~~Rpt~~~ll~~p  296 (314)
T cd08216         281 RDPESRPSASQLLNHS  296 (314)
T ss_pred             cCCCcCcCHHHHhcCc
Confidence            9999999999999864


No 260
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00  E-value=1.3e-37  Score=266.60  Aligned_cols=222  Identities=24%  Similarity=0.318  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++......++||||+ +++|.+++......+++..++.++.||+.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  121 (286)
T cd07832          46 ALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IM  121 (286)
T ss_pred             HHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999 99999998766677999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||||+||+++.++.++|+|||++........ .......|+..|+|||++.+. .++.++|||||||++|+|++|.++
T Consensus       122 H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~  200 (286)
T cd07832         122 HRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPL  200 (286)
T ss_pred             cCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcC
Confidence            999999999999999999999999987644321 112234678899999998654 468999999999999999999888


Q ss_pred             CCCCCCCCCcchHHhhhhhhccc-----c------ccccccCCcc----CCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGER-----R------RFYRLIDPRL----EGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      |........   ...........     .      .......+..    ........+..+.+++.+||+.||++|||++
T Consensus       201 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  277 (286)
T cd07832         201 FPGENDIEQ---LAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAA  277 (286)
T ss_pred             cCCCCHHHH---HHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHH
Confidence            865432111   11111000000     0      0000000000    0001112347899999999999999999999


Q ss_pred             HHHHHh
Q 021891          226 EVVEAL  231 (306)
Q Consensus       226 ell~~l  231 (306)
                      ++++|.
T Consensus       278 ~~l~h~  283 (286)
T cd07832         278 EALRHP  283 (286)
T ss_pred             HHhhCc
Confidence            999863


No 261
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00  E-value=3e-37  Score=261.89  Aligned_cols=209  Identities=24%  Similarity=0.358  Sum_probs=164.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++||||+++++++.+.  +..++++||+++++|.+++.... .+++..++.++.|++.||.|||+.+   
T Consensus        51 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~---  126 (266)
T cd06651          51 LECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM---  126 (266)
T ss_pred             HHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            57899999999999999999988763  57889999999999999986544 5899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||||+||+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++|.
T Consensus       127 i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~  206 (266)
T cd06651         127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK  206 (266)
T ss_pred             eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCC
Confidence            999999999999999999999999998764321111 1112345788999999999888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||.......   .+   .....      ....    ..++...+..+.+++ +||..+|++||+++||++|-
T Consensus       207 ~pf~~~~~~~---~~---~~~~~------~~~~----~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp  262 (266)
T cd06651         207 PPWAEYEAMA---AI---FKIAT------QPTN----PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHP  262 (266)
T ss_pred             CCccccchHH---HH---HHHhc------CCCC----CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence            9997542211   00   00000      0001    122233456677888 68889999999999999863


No 262
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=100.00  E-value=2.5e-37  Score=265.81  Aligned_cols=221  Identities=24%  Similarity=0.330  Sum_probs=164.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++.+++..++||||+.+ +|.+++.+....+++..++.++.|+++||.|||+.+   ++
T Consensus        50 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~  125 (291)
T cd07844          50 AIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VL  125 (291)
T ss_pred             HHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            46799999999999999999999999999999999974 999988776667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+||+++.++.+||+|||+++........  .....++..|+|||++.+ ..++.++||||+|+++|+|++|..|
T Consensus       126 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~  203 (291)
T cd07844         126 HRDLKPQNLLISERGELKLADFGLARAKSVPSKT--YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPL  203 (291)
T ss_pred             cccCCHHHEEEcCCCCEEECccccccccCCCCcc--ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999998754322111  122346788999999875 4589999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhcc--cc------c---cc----cccC-CccCCCC-CHHHHHHHHHHHHHcccCCCCCCCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGE--RR------R---FY----RLID-PRLEGHF-SIKGAQKAAQLAAHCLSRDPKARPL  223 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~--~~------~---~~----~~~~-~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps  223 (306)
                      |........  ...........  ..      .   ..    .... ....... .......+.+++.+||+.+|++|||
T Consensus       204 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps  281 (291)
T cd07844         204 FPGSTDVED--QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS  281 (291)
T ss_pred             CCCCccHHH--HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC
Confidence            965431110  00000000000  00      0   00    0000 0000000 0001267889999999999999999


Q ss_pred             HHHHHHH
Q 021891          224 MSEVVEA  230 (306)
Q Consensus       224 ~~ell~~  230 (306)
                      +.+++++
T Consensus       282 ~~e~l~~  288 (291)
T cd07844         282 AAEAMKH  288 (291)
T ss_pred             HHHHhcC
Confidence            9999875


No 263
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.9e-38  Score=278.85  Aligned_cols=213  Identities=23%  Similarity=0.372  Sum_probs=174.5

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      ||..|+.+|+.++|||+|+++|+|..+..+|||+|||..|+|.++|.+.++ .++.-....++-||..|++||..++   
T Consensus       309 EFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---  385 (1157)
T KOG4278|consen  309 EFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---  385 (1157)
T ss_pred             HHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---
Confidence            699999999999999999999999999999999999999999999987643 4666777899999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      +|||||...|+|+.++..+|++|||+++.+.... ........-...|.|||-+....++.|+|||+||++|||+.| |.
T Consensus       386 FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGM  464 (1157)
T KOG4278|consen  386 FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGM  464 (1157)
T ss_pred             hhhhhhhhhhccccccceEEeeccchhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999875532 222211122457999999999999999999999999999988 77


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .||.+......                 +.++.....-+-+..++..+++|++.||+++|.+||++.|+-+.++.+
T Consensus       465 sPYPGidlSqV-----------------Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  465 SPYPGIDLSQV-----------------YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             CCCCCccHHHH-----------------HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            88876432111                 112222222222345678999999999999999999999999877643


No 264
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=100.00  E-value=1.8e-37  Score=266.11  Aligned_cols=224  Identities=26%  Similarity=0.341  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++..++..++||||++++.+..+. .....+++..++.++.||+.||.|||..+   ++
T Consensus        47 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~  122 (288)
T cd07833          47 ALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLE-ASPGGLPPDAVRSYIWQLLQAIAYCHSHN---II  122 (288)
T ss_pred             HHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999886666554 44456899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+|+||+++.++.+||+|||++......... ......++..|+|||++.+. .++.++||||||+++|+|++|..|
T Consensus       123 H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  201 (288)
T cd07833         123 HRDIKPENILVSESGVLKLCDFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPL  201 (288)
T ss_pred             cCCCCHHHeEECCCCCEEEEeeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876543321 12335678899999999887 889999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhh--------ccccccc--cccCCc----cCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHL--------GERRRFY--RLIDPR----LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      |......+............        .....+.  +..+..    ....++...+.++.+||.+||..+|++|||+++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  281 (288)
T cd07833         202 FPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE  281 (288)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHH
Confidence            97543221111100000000        0000000  000000    000112223678999999999999999999999


Q ss_pred             HHHH
Q 021891          227 VVEA  230 (306)
Q Consensus       227 ll~~  230 (306)
                      ++++
T Consensus       282 il~~  285 (288)
T cd07833         282 LLQH  285 (288)
T ss_pred             HhcC
Confidence            9875


No 265
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00  E-value=3.5e-37  Score=259.72  Aligned_cols=206  Identities=30%  Similarity=0.453  Sum_probs=165.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |.+|+.+++.++||||+++++++..+ ..++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+.+   +
T Consensus        46 ~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~  121 (254)
T cd05083          46 FLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---L  121 (254)
T ss_pred             HHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            67899999999999999999998654 5799999999999999997553 35899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +||||||+||+++.++.+||+|||++.......     .....+..|+|||.+.+..++.++|+|||||++|+|++ |..
T Consensus       122 ~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~  196 (254)
T cd05083         122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRA  196 (254)
T ss_pred             eccccCcceEEEcCCCcEEECCCccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999987643211     11233567999999988889999999999999999998 899


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      ||........   ...    .....   .   ..    .....+..+.+++.+||+.+|++||++.++++.|+.
T Consensus       197 p~~~~~~~~~---~~~----~~~~~---~---~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         197 PYPKMSLKEV---KEC----VEKGY---R---ME----PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCccCCHHHH---HHH----HhCCC---C---CC----CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            9875432211   110    00000   0   00    111235688899999999999999999999998753


No 266
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00  E-value=8e-38  Score=264.17  Aligned_cols=212  Identities=30%  Similarity=0.473  Sum_probs=168.4

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|+.++++++|+||+++++++.+.+..++||||+.+++|.+++. ....+++..++.++.|++.||.+||+.+   ++|
T Consensus        46 ~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H  121 (260)
T PF00069_consen   46 IREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKG---IVH  121 (260)
T ss_dssp             HHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred             hhhhhcccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc---ccc
Confidence            358999999999999999999999999999999999999999997 3346899999999999999999999998   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      +||||+||+++.++.++|+|||.+.....  .........++..|+|||++. +..++.++||||||+++|+|++|..||
T Consensus       122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~  199 (260)
T PF00069_consen  122 RDIKPENILLDENGEVKLIDFGSSVKLSE--NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPF  199 (260)
T ss_dssp             SSBSGGGEEESTTSEEEESSGTTTEESTS--TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSS
T ss_pred             ccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999976411  122334467899999999998 788999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .................   .  ........      .......+.+++.+||+.||++|||+.+++++.
T Consensus       200 ~~~~~~~~~~~~~~~~~---~--~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~  258 (260)
T PF00069_consen  200 EESNSDDQLEIIEKILK---R--PLPSSSQQ------SREKSEELRDLIKKMLSKDPEQRPSAEELLKHP  258 (260)
T ss_dssp             TTSSHHHHHHHHHHHHH---T--HHHHHTTS------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred             ccccchhhhhhhhhccc---c--cccccccc------cchhHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence            86511111111110000   0  00000000      000127899999999999999999999999853


No 267
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00  E-value=2.5e-37  Score=265.75  Aligned_cols=202  Identities=29%  Similarity=0.400  Sum_probs=167.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++.+.+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   ++
T Consensus        48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~---i~  123 (290)
T cd05580          48 VLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD---IV  123 (290)
T ss_pred             HHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            568999999999999999999999999999999999999999998655 47899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.+||+|||++......     .....|+..|+|||.+.+..++.++||||||+++|+|++|..||
T Consensus       124 H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  198 (290)
T cd05580         124 YRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPF  198 (290)
T ss_pred             cCCCCHHHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999875443     23346889999999998888899999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~  230 (306)
                      .......   ....   ....        ...    ++...+..+.+++.+||+.||.+|+     +++|++++
T Consensus       199 ~~~~~~~---~~~~---~~~~--------~~~----~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         199 FDDNPIQ---IYEK---ILEG--------KVR----FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             CCCCHHH---HHHH---HhcC--------Ccc----CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence            7543110   0000   0000        001    1112256889999999999999999     77777765


No 268
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00  E-value=1.1e-37  Score=268.12  Aligned_cols=207  Identities=26%  Similarity=0.392  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++|+||+++++.+...+..++||||+++++|.+++..  ..+++..++.++.||+.||.|||+.+   ++
T Consensus        66 ~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~---iv  140 (292)
T cd06658          66 LFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG---VI  140 (292)
T ss_pred             HHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---Ee
Confidence            67899999999999999999999999999999999999999998743  25899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++||||||+++|||++|..||
T Consensus       141 H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~  218 (292)
T cd06658         141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY  218 (292)
T ss_pred             ecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876433221  122346788999999998888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ........   .....          ....+....  ....+..+.+++.+||..||.+|||+++++++
T Consensus       219 ~~~~~~~~---~~~~~----------~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         219 FNEPPLQA---MRRIR----------DNLPPRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             CCCCHHHH---HHHHH----------hcCCCcccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            75432111   00000          011111111  11234678899999999999999999999985


No 269
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00  E-value=2.1e-37  Score=272.27  Aligned_cols=214  Identities=30%  Similarity=0.429  Sum_probs=165.1

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeC-CeeEEEEEcCCCCCHHHHhhcCC-----------------------------
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIED-DQRLLVYEFMPRGSLENHLFRRS-----------------------------   50 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~~~-----------------------------   50 (306)
                      +.+|+++|.++ +|+||+++++++... ...++|||||++|+|.+++....                             
T Consensus        57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (343)
T cd05103          57 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKR  136 (343)
T ss_pred             HHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhh
Confidence            56899999999 689999999988654 46789999999999999885421                             


Q ss_pred             -------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEc
Q 021891           51 -------------------------------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLD   93 (306)
Q Consensus        51 -------------------------------------~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~   93 (306)
                                                           ..+++..+..++.|++.||.|||+.+   ++||||||+||+++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~  213 (343)
T cd05103         137 RLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS  213 (343)
T ss_pred             hccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEc
Confidence                                                 23677888999999999999999988   99999999999999


Q ss_pred             CCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcch
Q 021891           94 ADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNL  172 (306)
Q Consensus        94 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~  172 (306)
                      .++.+||+|||++................++..|+|||.+.+..++.++||||||+++|+|++ |..||........  .
T Consensus       214 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~  291 (343)
T cd05103         214 ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--F  291 (343)
T ss_pred             CCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--H
Confidence            999999999999986533222111222345677999999988899999999999999999997 8888865422110  0


Q ss_pred             HHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          173 VEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      ..    .......      ...    +...+..+.+++..||+.||++|||+.+|+++|+.+
T Consensus       292 ~~----~~~~~~~------~~~----~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         292 CR----RLKEGTR------MRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             HH----HHhccCC------CCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            00    0001000      000    111235789999999999999999999999998754


No 270
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00  E-value=4.5e-38  Score=267.36  Aligned_cols=203  Identities=28%  Similarity=0.377  Sum_probs=172.1

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .+|-+||++++.+.||.+--.|++.+.+|+|+..|+||+|.-+|.+.+ ..|++..+..++.+|+.||++||..+   ||
T Consensus       233 LnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iV  309 (591)
T KOG0986|consen  233 LNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IV  309 (591)
T ss_pred             hHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---ee
Confidence            689999999999999999888999999999999999999999998764 46999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      +|||||+|||+|+.|+++|+|+|+|..+..+..   ....+||.+|||||++..+.|+...|.|||||++|||+.|..||
T Consensus       310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPF  386 (591)
T KOG0986|consen  310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPF  386 (591)
T ss_pred             eccCChhheeeccCCCeEeeccceEEecCCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCch
Confidence            999999999999999999999999998876543   33448999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      ..........-++...            .  ....+++...++++.+|.+.+|++||.+|...+
T Consensus       387 r~~KeKvk~eEvdrr~------------~--~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  387 RQRKEKVKREEVDRRT------------L--EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             hhhhhhhhHHHHHHHH------------h--cchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence            7654433221111110            0  111234556678999999999999999997544


No 271
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=100.00  E-value=4.4e-37  Score=260.67  Aligned_cols=213  Identities=28%  Similarity=0.408  Sum_probs=171.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|+++++.++|+||+++++.+...+..++|||++++++|.+++...  ...+++..+..++.|++.||.|||+.+   
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---  122 (267)
T cd06610          46 LRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---  122 (267)
T ss_pred             HHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            678999999999999999999999999999999999999999999654  246899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce--eeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHh
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ellt  156 (306)
                      ++|+||+|+||++++++.++|+|||++..........  ......|+..|+|||++... .++.++|+|||||++++|++
T Consensus       123 i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~  202 (267)
T cd06610         123 QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT  202 (267)
T ss_pred             eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh
Confidence            9999999999999999999999999987755433221  22345688999999998866 78999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH-FSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |..||........  .......   .        .+..... .....+..+.+++.+||+.||++|||+.+|++|
T Consensus       203 g~~p~~~~~~~~~--~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         203 GAAPYSKYPPMKV--LMLTLQN---D--------PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             CCCCccccChhhh--HHHHhcC---C--------CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            9999975433211  1111000   0        0001000 012345788999999999999999999999986


No 272
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00  E-value=3.5e-37  Score=260.81  Aligned_cols=208  Identities=25%  Similarity=0.333  Sum_probs=169.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++.++||||+++++++.+++..++||||+++++|.+++.+. ..+++..+..++.||+.||.|||+.+   ++
T Consensus        40 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~---~~  115 (262)
T cd05572          40 IFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRG---II  115 (262)
T ss_pred             HHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCC---cc
Confidence            678999999999999999999999999999999999999999998654 35899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++.......   ......|+..|++||.+.+..++.++|+||||+++|+|++|..||
T Consensus       116 h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  192 (262)
T cd05572         116 YRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPF  192 (262)
T ss_pred             cCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCc
Confidence            99999999999999999999999998764432   122346788999999998888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~  230 (306)
                      ....... ....   ....          .......++...+..+.++|.+||+.+|++||+     +.|++++
T Consensus       193 ~~~~~~~-~~~~---~~~~----------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         193 GEDDEDP-MEIY---NDIL----------KGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             CCCCCCH-HHHH---HHHh----------ccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            7654311 1111   0000          000001112222578999999999999999999     7787774


No 273
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00  E-value=4.7e-37  Score=267.18  Aligned_cols=210  Identities=27%  Similarity=0.307  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++.++|+||+++++++...+..++||||+.+++|.+++.+. ...+++..+..++.|++.||.|||+.+   +
T Consensus        48 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i  124 (316)
T cd05574          48 VLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---I  124 (316)
T ss_pred             HHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            578999999999999999999999999999999999999999998654 356899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc---------------------------eeeecccccccccCCcch
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT---------------------------HVSTRVMGTYGYAAPEYV  133 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~  133 (306)
                      +|+||||+||+++.++.++|+|||++.........                           .......|+..|+|||++
T Consensus       125 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~  204 (316)
T cd05574         125 VYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVI  204 (316)
T ss_pred             eccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHH
Confidence            99999999999999999999999998754322110                           011234678899999999


Q ss_pred             hcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHc
Q 021891          134 MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC  213 (306)
Q Consensus       134 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  213 (306)
                      .+..++.++||||||+++|+|++|..||...........      ......        ...  .....+..+.+++.+|
T Consensus       205 ~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~------~~~~~~--------~~~--~~~~~~~~~~~li~~~  268 (316)
T cd05574         205 SGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSN------ILKKEV--------TFP--GSPPVSSSARDLIRKL  268 (316)
T ss_pred             cCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHH------HhcCCc--------cCC--CccccCHHHHHHHHHH
Confidence            988899999999999999999999999975432211000      000000        000  0111467899999999


Q ss_pred             ccCCCCCCCC----HHHHHHH
Q 021891          214 LSRDPKARPL----MSEVVEA  230 (306)
Q Consensus       214 l~~~p~~Rps----~~ell~~  230 (306)
                      |+.||++|||    +.+++++
T Consensus       269 l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         269 LVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             ccCCHhHCCCchhhHHHHHcC
Confidence            9999999999    7777764


No 274
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00  E-value=1.6e-37  Score=267.74  Aligned_cols=208  Identities=24%  Similarity=0.381  Sum_probs=168.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++||||+++++++..++..++||||+++++|.+++..  ..+++..++.++.|++.||.|||+.+   ++
T Consensus        65 ~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---iv  139 (297)
T cd06659          65 LFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQG---VI  139 (297)
T ss_pred             HHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            56899999999999999999999999999999999999999997744  35899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||||+||+++.++.+||+|||++........  ......|+..|+|||++.+..++.++|||||||++|||++|..||
T Consensus       140 H~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~  217 (297)
T cd06659         140 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPY  217 (297)
T ss_pred             cCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999875433211  123356889999999998888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ........   .....    ..      ..+..  ......+..+.+++.+||+.+|++||++.+++++-
T Consensus       218 ~~~~~~~~---~~~~~----~~------~~~~~--~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~  272 (297)
T cd06659         218 FSDSPVQA---MKRLR----DS------PPPKL--KNAHKISPVLRDFLERMLTREPQERATAQELLDHP  272 (297)
T ss_pred             CCCCHHHH---HHHHh----cc------CCCCc--cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence            75432111   11000    00      00000  00112246788999999999999999999999963


No 275
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00  E-value=5.4e-37  Score=289.90  Aligned_cols=214  Identities=21%  Similarity=0.317  Sum_probs=166.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC----------CCCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR----------SLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----------~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      |.+|++++++++||||+++++++.+++..++||||++|++|.+++...          ...+++..+..++.||+.||+|
T Consensus        49 flrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~y  128 (932)
T PRK13184         49 FLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEY  128 (932)
T ss_pred             HHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999988531          1235667788999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCc----------------ceeeecccccccccCCcchhc
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK----------------THVSTRVMGTYGYAAPEYVMT  135 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~  135 (306)
                      ||+.+   |+||||||+||+++.++.+||+|||+++.......                ........||+.|+|||++.+
T Consensus       129 LHs~G---IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g  205 (932)
T PRK13184        129 VHSKG---VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG  205 (932)
T ss_pred             HHHCC---ccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC
Confidence            99988   99999999999999999999999999986521100                011123568999999999999


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHccc
Q 021891          136 GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS  215 (306)
Q Consensus       136 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  215 (306)
                      ..++.++|||||||++|||+||..||.........    .. .         ...++.... .....+..+.+++.+||+
T Consensus       206 ~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~----~~-~---------~i~~P~~~~-p~~~iP~~L~~LI~rcL~  270 (932)
T PRK13184        206 VPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS----YR-D---------VILSPIEVA-PYREIPPFLSQIAMKALA  270 (932)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh----hh-h---------hccChhhcc-ccccCCHHHHHHHHHHcc
Confidence            99999999999999999999999999763321110    00 0         000000000 011234678899999999


Q ss_pred             CCCCCCC-CHHHHHHHhCC
Q 021891          216 RDPKARP-LMSEVVEALKP  233 (306)
Q Consensus       216 ~~p~~Rp-s~~ell~~l~~  233 (306)
                      .||++|+ +++++++.|+.
T Consensus       271 ~DP~kR~ss~eeLl~~Le~  289 (932)
T PRK13184        271 VDPAERYSSVQELKQDLEP  289 (932)
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999997 56667666543


No 276
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00  E-value=3.7e-37  Score=264.97  Aligned_cols=223  Identities=25%  Similarity=0.343  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++||||+++++++...  +..++||||+. ++|.+++......+++..++.++.||+.||.|||+.+   
T Consensus        51 ~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---  126 (293)
T cd07843          51 SLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---  126 (293)
T ss_pred             HHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            46799999999999999999999887  88999999997 4999988766657999999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||||+||+++.++.+||+|||++........  ......++..|+|||.+.+. .++.++||||||+++|+|++|.
T Consensus       127 i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  204 (293)
T cd07843         127 ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK  204 (293)
T ss_pred             eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999987544321  11234568889999988754 4689999999999999999999


Q ss_pred             CCCCCCCCCCCcchHH----------hhhh-hhc--cccccccccCCccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCH
Q 021891          159 RSMDKNRPNGEHNLVE----------WARP-HLG--ERRRFYRLIDPRLEGHFSIK-GAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~----------~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      .||...........+.          |... ...  ....+.......+...++.. .++.+.++|.+||+.||++|||+
T Consensus       205 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~  284 (293)
T cd07843         205 PLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA  284 (293)
T ss_pred             CCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH
Confidence            9997654322111100          0000 000  00000000011111112211 35678999999999999999999


Q ss_pred             HHHHHH
Q 021891          225 SEVVEA  230 (306)
Q Consensus       225 ~ell~~  230 (306)
                      .|++++
T Consensus       285 ~ell~~  290 (293)
T cd07843         285 EDALKH  290 (293)
T ss_pred             HHHhcC
Confidence            999975


No 277
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00  E-value=4e-37  Score=263.82  Aligned_cols=210  Identities=28%  Similarity=0.373  Sum_probs=163.9

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEE-----eCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~-----~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      +.+|+.+++.+ +|+||+++++++.     .++..++||||+++++|.+++..   ....+++..+..++.|++.||.||
T Consensus        61 ~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  140 (286)
T cd06638          61 IEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL  140 (286)
T ss_pred             HHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH
Confidence            57899999999 7999999999874     34578999999999999998753   334689999999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-----CCCCchhHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSF  147 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Diwsl  147 (306)
                      |+.+   ++||||||+||+++.++.+||+|||+++.......  ......|+..|+|||++..     ..++.++|||||
T Consensus       141 H~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  215 (286)
T cd06638         141 HVNK---TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL  215 (286)
T ss_pred             HhCC---ccccCCCHHhEEECCCCCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence            9988   99999999999999999999999999876543211  1223468899999998753     457889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          148 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       148 G~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      ||++|+|++|+.||.........  ..     ... ........+       ...+..+.+||.+||+.||++|||+.|+
T Consensus       216 Gvi~~el~~g~~p~~~~~~~~~~--~~-----~~~-~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~el  280 (286)
T cd06638         216 GITAIELGDGDPPLADLHPMRAL--FK-----IPR-NPPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDL  280 (286)
T ss_pred             HHHHHHHhcCCCCCCCCchhHHH--hh-----ccc-cCCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHH
Confidence            99999999999998754322110  00     000 000001111       1124578999999999999999999999


Q ss_pred             HHHh
Q 021891          228 VEAL  231 (306)
Q Consensus       228 l~~l  231 (306)
                      ++++
T Consensus       281 l~~~  284 (286)
T cd06638         281 LQHV  284 (286)
T ss_pred             hhcc
Confidence            9875


No 278
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=100.00  E-value=1.3e-36  Score=260.92  Aligned_cols=216  Identities=26%  Similarity=0.344  Sum_probs=168.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      |.+|++++++++||||+++++++.+.  +.+++||||+++++|.+++..   ....+++..+..++.|++.||.|||+.+
T Consensus        46 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~  125 (287)
T cd06621          46 ILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK  125 (287)
T ss_pred             HHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67899999999999999999988654  468999999999999887643   3456899999999999999999999988


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                         ++|+||+|+||+++.++.++|+|||++.......    .....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus       126 ---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~  198 (287)
T cd06621         126 ---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQ  198 (287)
T ss_pred             ---cccCCCCHHHEEEecCCeEEEeeccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence               9999999999999999999999999987643221    123457888999999988899999999999999999999


Q ss_pred             CCCCCCCCCCC--CCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          157 GRRSMDKNRPN--GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       157 g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |..||......  .......+...   . .. .. +.....  .....+..+.+++.+||+.+|.+|||+.|++++-.
T Consensus       199 g~~p~~~~~~~~~~~~~~~~~~~~---~-~~-~~-~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~  268 (287)
T cd06621         199 NRFPFPPEGEPPLGPIELLSYIVN---M-PN-PE-LKDEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW  268 (287)
T ss_pred             CCCCCCcccCCCCChHHHHHHHhc---C-Cc-hh-hccCCC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence            99999765331  11111111111   0 00 00 000000  01123578899999999999999999999999654


No 279
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=100.00  E-value=5.2e-37  Score=262.00  Aligned_cols=209  Identities=28%  Similarity=0.383  Sum_probs=167.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++|++++||||+++++++...+..|+||||+++++|.+++.+.. ..+++..+..++.|++.||.|||+.+   +
T Consensus        40 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i  116 (277)
T cd05577          40 ALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---I  116 (277)
T ss_pred             HHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            4679999999999999999999999999999999999999999986643 36899999999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||+|+||+++.++.++|+|||++.......   ......++..|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       117 ~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p  193 (277)
T cd05577         117 VYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSP  193 (277)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCC
Confidence            999999999999999999999999987654321   12234567889999999888899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~  230 (306)
                      |...........+.  .....            .....+...+..+.++|.+||+.||.+||     ++.++++|
T Consensus       194 ~~~~~~~~~~~~~~--~~~~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         194 FRQRKEKVEKEELK--RRTLE------------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             CCCCcccccHHHHH--hcccc------------ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            97654321111110  00000            00111222357889999999999999999     55556653


No 280
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00  E-value=5.5e-37  Score=259.59  Aligned_cols=207  Identities=25%  Similarity=0.338  Sum_probs=168.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe--CCeeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhh---
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLH---   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH---   73 (306)
                      +.+|++++++++|+||+++++++..  ....+++|||+++++|.+++...   ...+++..++.++.|++.||.|||   
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  125 (265)
T cd08217          46 LVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRS  125 (265)
T ss_pred             HHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCc
Confidence            5679999999999999999998764  34678999999999999998653   457899999999999999999999   


Q ss_pred             --cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHH
Q 021891           74 --EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  151 (306)
Q Consensus        74 --~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  151 (306)
                        +.+   ++|+||||+||+++.++.+||+|||++........  ......|+..|+|||.+.+..++.++|+||||+++
T Consensus       126 ~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il  200 (265)
T cd08217         126 DPGNT---VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLI  200 (265)
T ss_pred             cccCc---ceecCCCHHHEEEecCCCEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHH
Confidence              666   99999999999999999999999999987654322  12234688999999999888899999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ++|++|..||......   .......    .          .....++...+..+.+++.+||+.+|++||++.+|+++
T Consensus       201 ~~l~~g~~p~~~~~~~---~~~~~~~----~----------~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         201 YELCALSPPFTARNQL---QLASKIK----E----------GKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHCCCcccCcCHH---HHHHHHh----c----------CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            9999999999764311   1111100    0          00111222345789999999999999999999999986


No 281
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=100.00  E-value=1e-36  Score=262.80  Aligned_cols=223  Identities=24%  Similarity=0.313  Sum_probs=167.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++.+.+..++||||+ +++|.+++......+++..++.++.||++||.|||+.+   ++
T Consensus        49 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~  124 (298)
T cd07841          49 ALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---IL  124 (298)
T ss_pred             HHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            457999999999999999999999999999999999 88999999665547999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||||+||+++.++.++|+|||+++.......  ......++..|+|||.+.+ ..++.++|||||||++|+|++|.++
T Consensus       125 H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~  202 (298)
T cd07841         125 HRDLKPNNLLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPF  202 (298)
T ss_pred             ecCCChhhEEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcc
Confidence            999999999999999999999999987544321  1222346778999998864 4678999999999999999999888


Q ss_pred             CCCCCCCCCcchHHhhh--h---hhccccccccccC-----CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWAR--P---HLGERRRFYRLID-----PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |................  .   .+...........     +..........+..+.++|.+||+.||++|||+.|++++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         203 LPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            76543321110000000  0   0000000000000     000000112235788999999999999999999999985


No 282
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=100.00  E-value=5.1e-37  Score=258.77  Aligned_cols=206  Identities=27%  Similarity=0.371  Sum_probs=167.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |++|+++|+.++||||+++++.+..++..++||||+++++|.+++.+. ...+++..++.++.|++.||.|||+.+   +
T Consensus        46 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i  122 (256)
T cd08220          46 AQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---I  122 (256)
T ss_pred             HHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            678999999999999999999999999999999999999999999764 345899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCC-CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      +|+||+|+||+++.+ +.+||+|||.+........   .....|+..|+|||.+.+..++.++||||||+++|+|++|..
T Consensus       123 ~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~  199 (256)
T cd08220         123 LHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKR  199 (256)
T ss_pred             ecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCC
Confidence            999999999999865 4689999999987543321   223467889999999988888999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ||........   ......     ..     ...    .+...+..+.+++.+||+.+|++|||+.|++++
T Consensus       200 ~~~~~~~~~~---~~~~~~-----~~-----~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         200 AFEAANLPAL---VLKIMS-----GT-----FAP----ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CcccCchHHH---HHHHHh-----cC-----CCC----CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            9865432211   110000     00     000    111235688999999999999999999999986


No 283
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00  E-value=4e-37  Score=263.84  Aligned_cols=207  Identities=27%  Similarity=0.403  Sum_probs=168.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++|+||+++++++...+..++|+||+++++|.+++..  ..+++..+..++.|++.||+|||+.+   ++
T Consensus        63 ~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---i~  137 (285)
T cd06648          63 LFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG---VI  137 (285)
T ss_pred             HHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            56899999999999999999999999999999999999999999866  46899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||+|+||+++.++.++|+|||.+........  ......|+..|+|||.+.+..++.++||||||+++|+|++|..||
T Consensus       138 H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~  215 (285)
T cd06648         138 HRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPY  215 (285)
T ss_pred             cCCCChhhEEEcCCCcEEEcccccchhhccCCc--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999998875433211  122346889999999998888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ........   .....          ....+...  .....+..+.+++.+||+.+|++|||+.+++++
T Consensus       216 ~~~~~~~~---~~~~~----------~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         216 FNEPPLQA---MKRIR----------DNLPPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             cCCCHHHH---HHHHH----------hcCCCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            65432111   11000          00001110  011234689999999999999999999999985


No 284
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00  E-value=3.1e-37  Score=260.25  Aligned_cols=207  Identities=23%  Similarity=0.359  Sum_probs=169.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++|+||+++++++...+..++||||+.+++|.+++... ...+++..+..++.|++.||.|||+.+   +
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i  122 (256)
T cd08218          46 SRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---I  122 (256)
T ss_pred             HHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---E
Confidence            678999999999999999999999999999999999999999988654 346899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||+|+||+++.++.++|+|||++........  ......|+..|+|||++.+..++.++|+|||||++++|++|..|
T Consensus       123 ~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08218         123 LHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHA  200 (256)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999976543221  12234578889999999888899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |.......      ........      . .+    ..+...+.++.++|.+||+.+|++||++.+++++
T Consensus       201 ~~~~~~~~------~~~~~~~~------~-~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         201 FEAGNMKN------LVLKIIRG------S-YP----PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             ccCCCHHH------HHHHHhcC------C-CC----CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            86532211      11000000      0 00    1122335688999999999999999999999986


No 285
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00  E-value=4.2e-37  Score=266.21  Aligned_cols=210  Identities=23%  Similarity=0.283  Sum_probs=164.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++.+..++..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   ++
T Consensus        48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~  123 (305)
T cd05609          48 VFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYG---IV  123 (305)
T ss_pred             HHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            568999999999999999999999999999999999999999999655 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCc-------------ceeeecccccccccCCcchhcCCCCchhHHHHHH
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK-------------THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG  148 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  148 (306)
                      ||||||+||+++.++.+||+|||+++.......             ........|+..|+|||.+.+..++.++||||||
T Consensus       124 H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  203 (305)
T cd05609         124 HRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMG  203 (305)
T ss_pred             ccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHH
Confidence            999999999999999999999999864211100             0011124578889999999888899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH---H
Q 021891          149 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM---S  225 (306)
Q Consensus       149 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---~  225 (306)
                      |++|||++|..||.+.....   ..   ......     ....+...    ...+..+.++|.+||+.||++||++   .
T Consensus       204 ~vl~el~~g~~pf~~~~~~~---~~---~~~~~~-----~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~  268 (305)
T cd05609         204 IILYEFLVGCVPFFGDTPEE---LF---GQVISD-----DIEWPEGD----EALPADAQDLISRLLRQNPLERLGTGGAF  268 (305)
T ss_pred             HHHHHHHhCCCCCCCCCHHH---HH---HHHHhc-----ccCCCCcc----ccCCHHHHHHHHHHhccChhhccCccCHH
Confidence            99999999999997543211   11   000000     00001110    1235678999999999999999985   5


Q ss_pred             HHHHH
Q 021891          226 EVVEA  230 (306)
Q Consensus       226 ell~~  230 (306)
                      +++++
T Consensus       269 ~ll~~  273 (305)
T cd05609         269 EVKQH  273 (305)
T ss_pred             HHHhC
Confidence            55554


No 286
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00  E-value=5.5e-39  Score=288.30  Aligned_cols=215  Identities=25%  Similarity=0.407  Sum_probs=180.7

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +|+.|+.||.+++||||+++.|+....+..+||+|||+.|+|+.+|+++...|...+...+++.|+.|+.||-+.+   +
T Consensus       676 dFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---Y  752 (996)
T KOG0196|consen  676 DFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---Y  752 (996)
T ss_pred             hhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---c
Confidence            5899999999999999999999999999999999999999999999999888999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GR  158 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~  158 (306)
                      |||||.+.|||++.+-.+|++|||+++.+.+.... .......-..+|.|||.+...+++.++||||+|+++||.++ |.
T Consensus       753 VHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE  832 (996)
T KOG0196|consen  753 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  832 (996)
T ss_pred             hhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence            99999999999999999999999999987554322 11122222568999999999999999999999999999766 88


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      .||-.....+.   +..+.       .-+++.       -+.+++..|.+|+..||++|..+||.+.+|+..|.++.
T Consensus       833 RPYWdmSNQdV---IkaIe-------~gyRLP-------pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI  892 (996)
T KOG0196|consen  833 RPYWDMSNQDV---IKAIE-------QGYRLP-------PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI  892 (996)
T ss_pred             CcccccchHHH---HHHHH-------hccCCC-------CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence            89876544322   22111       111222       23456789999999999999999999999999987654


No 287
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00  E-value=9.3e-37  Score=258.71  Aligned_cols=209  Identities=22%  Similarity=0.312  Sum_probs=165.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++|+||+++++++.+.  ..+++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+   
T Consensus        51 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---  126 (265)
T cd06652          51 LECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNM---  126 (265)
T ss_pred             HHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            57799999999999999999998764  4678999999999999998654 35889999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||||+||+++.++.++|+|||+++........ .......|+..|+|||++.+..++.++|||||||++|+|++|.
T Consensus       127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~  206 (265)
T cd06652         127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK  206 (265)
T ss_pred             EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCC
Confidence            999999999999999999999999998764321111 1122345788999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||.......     .....           .........+...+..+.+++.+||. +|++||++++++++.
T Consensus       207 ~p~~~~~~~~-----~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~  262 (265)
T cd06652         207 PPWAEFEAMA-----AIFKI-----------ATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT  262 (265)
T ss_pred             CCCCccchHH-----HHHHH-----------hcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence            9996432111     00000           00001112334456788899999994 999999999999863


No 288
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00  E-value=6.5e-37  Score=258.32  Aligned_cols=206  Identities=28%  Similarity=0.440  Sum_probs=168.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+++++.++|+||+++++++...+..++|+||+++++|.+++.+.. .+++..+..++.|++.||.|||+.+   ++
T Consensus        49 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~  124 (258)
T cd06632          49 LEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN---TV  124 (258)
T ss_pred             HHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            6789999999999999999999999999999999999999999986543 6899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC-CCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+|+||+++.++.+||+|||++.......   ......|+..|+|||.+.... ++.++|+|||||++|+|++|..|
T Consensus       125 H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~p  201 (258)
T cd06632         125 HRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPP  201 (258)
T ss_pred             cCCCCHHHEEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999987654322   223456888999999987666 89999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |........  ...  ..   ....     .+    ..+...+..+.+++.+||+.+|++||++.+++.+
T Consensus       202 f~~~~~~~~--~~~--~~---~~~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         202 WSQLEGVAA--VFK--IG---RSKE-----LP----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             cccCcHHHH--HHH--HH---hccc-----CC----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            975431110  000  00   0000     01    1112235688899999999999999999999975


No 289
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00  E-value=9e-37  Score=259.82  Aligned_cols=213  Identities=23%  Similarity=0.422  Sum_probs=165.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRR-----SLPLPWSIRMKIALGAAKGLA   70 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~-----~~~l~~~~~~~~~~qi~~~l~   70 (306)
                      +.+|++++++++||||+++++++...+      ..+++++|+.+|+|.+++...     ...+++..++.++.|++.||+
T Consensus        48 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~  127 (273)
T cd05074          48 FLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGME  127 (273)
T ss_pred             HHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Confidence            678999999999999999999886542      247889999999998887432     224788999999999999999


Q ss_pred             HhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHH
Q 021891           71 FLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV  150 (306)
Q Consensus        71 ~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  150 (306)
                      |||+.+   ++||||||+||+++.++.+||+|||+++...............++..|++||.+....++.++|||||||+
T Consensus       128 ~lH~~~---i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~i  204 (273)
T cd05074         128 YLSSKN---FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVT  204 (273)
T ss_pred             HHHhCC---EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHH
Confidence            999988   99999999999999999999999999987543322222223345677999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      +|+|++ |..||.......   ...+..    ....      ..    .+...+..+.+++.+||+.+|++|||+.++++
T Consensus       205 l~el~~~g~~p~~~~~~~~---~~~~~~----~~~~------~~----~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         205 MWEIMTRGQTPYAGVENSE---IYNYLI----KGNR------LK----QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             HHHHhhCCCCCCCCCCHHH---HHHHHH----cCCc------CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999 888886542211   111110    0000      00    11123468999999999999999999999999


Q ss_pred             HhCCC
Q 021891          230 ALKPL  234 (306)
Q Consensus       230 ~l~~~  234 (306)
                      .|+.+
T Consensus       268 ~l~~~  272 (273)
T cd05074         268 QLELI  272 (273)
T ss_pred             HHHhh
Confidence            98753


No 290
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00  E-value=5.7e-37  Score=260.96  Aligned_cols=209  Identities=29%  Similarity=0.400  Sum_probs=164.9

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      |++|+++++++ +|+||+++++++....      ..++||||+++++|.+++...   ...+++..++.++.|++.||.|
T Consensus        49 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~  128 (275)
T cd06608          49 IKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY  128 (275)
T ss_pred             HHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            67899999999 7999999999997644      489999999999999988542   3578999999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-----CCCCchhHHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYS  146 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Diws  146 (306)
                      ||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......|+..|+|||++..     ..++.++||||
T Consensus       129 lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s  203 (275)
T cd06608         129 LHENK---VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWS  203 (275)
T ss_pred             HhcCC---cccCCCCHHHEEEccCCeEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHH
Confidence            99988   9999999999999999999999999987643322  12233568889999998753     34678999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          147 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       147 lG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      |||++|+|++|..||........  ...    ..       ....+..  ..+...+..+.+||.+||..||++|||+.+
T Consensus       204 lG~il~~l~~g~~p~~~~~~~~~--~~~----~~-------~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~  268 (275)
T cd06608         204 LGITAIELADGKPPLCDMHPMRA--LFK----IP-------RNPPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEE  268 (275)
T ss_pred             hHHHHHHHHhCCCCccccchHHH--HHH----hh-------ccCCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHH
Confidence            99999999999999964322111  000    00       0000111  111234578999999999999999999999


Q ss_pred             HHHH
Q 021891          227 VVEA  230 (306)
Q Consensus       227 ll~~  230 (306)
                      ++++
T Consensus       269 ll~~  272 (275)
T cd06608         269 LLEH  272 (275)
T ss_pred             HhcC
Confidence            9985


No 291
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00  E-value=8.6e-37  Score=266.91  Aligned_cols=225  Identities=21%  Similarity=0.257  Sum_probs=166.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |++|+.+++.++||||++++++|..++..++||||+.+++|.+++.+. ...+++..+..++.|++.||+|||+.+   +
T Consensus        46 ~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i  122 (328)
T cd08226          46 LQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---Y  122 (328)
T ss_pred             HHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            678999999999999999999999999999999999999999988654 345899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce-----eeecccccccccCCcchhc--CCCCchhHHHHHHHHHHH
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMT--GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~e  153 (306)
                      +||||||+||+++.++.++++||+.+..........     ......++..|+|||++.+  ..++.++|||||||++|+
T Consensus       123 vHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~e  202 (328)
T cd08226         123 IHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACE  202 (328)
T ss_pred             ecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHH
Confidence            999999999999999999999998654322111100     0011234567999999876  357899999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhh----------------hhc-ccccc--------------ccccCCccCCCCCHHH
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARP----------------HLG-ERRRF--------------YRLIDPRLEGHFSIKG  202 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~----------------~~~-~~~~~--------------~~~~~~~~~~~~~~~~  202 (306)
                      |++|..||.........  ......                ... .....              .......+........
T Consensus       203 l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (328)
T cd08226         203 LATGRVPFQDMLRTQML--LQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTF  280 (328)
T ss_pred             HHhCCCCCCCcChHHHH--HHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhh
Confidence            99999999764321110  000000                000 00000              0000111111223345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          203 AQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       203 ~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +..+.+|+.+||+.||++|||+.+++++.
T Consensus       281 ~~~~~~li~~~l~~dP~~Rpta~e~l~~~  309 (328)
T cd08226         281 SPAFQNLVELCLQQDPEKRPSASSLLSHA  309 (328)
T ss_pred             hHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence            67899999999999999999999999864


No 292
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00  E-value=4.5e-37  Score=262.99  Aligned_cols=208  Identities=29%  Similarity=0.389  Sum_probs=164.0

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEe------CCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIE------DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~------~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      ++.|+.+++++ +|+||+++++++..      .+..++||||+++++|.+++... ...+++..++.++.||+.||.|||
T Consensus        59 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  138 (282)
T cd06636          59 IKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH  138 (282)
T ss_pred             HHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            57889999998 79999999999853      45789999999999999988653 345889999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFG  148 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG  148 (306)
                      +.+   ++|+||||+||+++.++.++|+|||++........  ......|+..|+|||++.     ...++.++||||||
T Consensus       139 ~~~---ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG  213 (282)
T cd06636         139 AHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG  213 (282)
T ss_pred             HCC---cccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence            988   99999999999999999999999999876432111  123356888999999875     34678899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          149 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       149 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |++|+|++|..||............             .....+..   .....+..+.+||.+||+.||.+|||+.||+
T Consensus       214 ~~l~el~~g~~p~~~~~~~~~~~~~-------------~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell  277 (282)
T cd06636         214 ITAIEMAEGAPPLCDMHPMRALFLI-------------PRNPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLL  277 (282)
T ss_pred             HHHHHHHhCCCCccccCHHhhhhhH-------------hhCCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence            9999999999999654322111100             00000111   1112456899999999999999999999998


Q ss_pred             HH
Q 021891          229 EA  230 (306)
Q Consensus       229 ~~  230 (306)
                      ++
T Consensus       278 ~~  279 (282)
T cd06636         278 KH  279 (282)
T ss_pred             cC
Confidence            75


No 293
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.3e-37  Score=276.58  Aligned_cols=209  Identities=25%  Similarity=0.384  Sum_probs=174.9

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +|.+|+.+|-+|+|+|++++||+..+ ....+|||+++.|||.+.|.+ ....|.......++.|||.||.||.+++   
T Consensus       157 dflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---  232 (1039)
T KOG0199|consen  157 DFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---  232 (1039)
T ss_pred             HHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---
Confidence            48999999999999999999999887 678899999999999999987 4556889999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeec-ccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-C
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-G  157 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g  157 (306)
                      +|||||...|+++.....|||+|||+.+.+...+....... ..-...|+|||.+....++.++|||++|+++|||+| |
T Consensus       233 lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyG  312 (1039)
T KOG0199|consen  233 LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYG  312 (1039)
T ss_pred             hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccC
Confidence            99999999999999999999999999998776554443332 223557999999999999999999999999999998 6


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ..||.+......+..                 +|....-.-+..++++++++++.||..+|.+|||+..|.+.
T Consensus       313 EePW~G~~g~qIL~~-----------------iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  313 EEPWVGCRGIQILKN-----------------IDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             CCCCCCCCHHHHHHh-----------------ccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            789987654322222                 22111112244678999999999999999999999999744


No 294
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00  E-value=2.5e-36  Score=256.61  Aligned_cols=209  Identities=24%  Similarity=0.390  Sum_probs=167.5

Q ss_pred             HHHHHHHHhc-CCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhc-CC
Q 021891            2 WQAEVNFLGD-LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHE-EA   76 (306)
Q Consensus         2 ~~~E~~il~~-l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~-~~   76 (306)
                      +.+|++++.+ ++|+||+++++++.+++..++||||+++++|.+++..   ....+++..++.++.|++.||.|||+ .+
T Consensus        55 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  134 (269)
T cd08528          55 IVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR  134 (269)
T ss_pred             HHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc
Confidence            4568887765 7999999999999999999999999999999988743   34568999999999999999999996 56


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                         ++|+||+|+||+++.++.++|+|||.+.......   ......|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus       135 ---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~  208 (269)
T cd08528         135 ---IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT  208 (269)
T ss_pred             ---eeecCCCHHHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence               9999999999999999999999999998754432   2334568889999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |..||........   ..   ... .     ....+..    ....+..+.+++.+||+.||++||++.|+.++++
T Consensus       209 g~~p~~~~~~~~~---~~---~~~-~-----~~~~~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         209 LQPPFYSTNMLSL---AT---KIV-E-----AVYEPLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CCCcccccCHHHH---HH---HHh-h-----ccCCcCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            9999864322111   00   000 0     0000100    1123468899999999999999999999999875


No 295
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=1.9e-37  Score=272.82  Aligned_cols=206  Identities=23%  Similarity=0.316  Sum_probs=174.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++|+.|+|||||+++.+......+|+||||+.+|.+.+++.+++ ...+..+..++.|+..|++|||+++   |+
T Consensus       102 ~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~---iv  177 (596)
T KOG0586|consen  102 LGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKN---IV  177 (596)
T ss_pred             HHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcc---ee
Confidence            4689999999999999999999999999999999999999999998877 4555899999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCC-CchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~p  160 (306)
                      |||||++|||++.+..+||+|||++..+..+   ......+|++.|.|||++.+..| .+.+|+||+|+++|-|+.|..|
T Consensus       178 HrdLk~eNilL~~~mnikIaDfgfS~~~~~~---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLP  254 (596)
T KOG0586|consen  178 HRDLKAENILLDENMNIKIADFGFSTFFDYG---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLP  254 (596)
T ss_pred             ccccchhhcccccccceeeeccccceeeccc---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccc
Confidence            9999999999999999999999999887543   34566899999999999998877 5799999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |.+..-.+......      ...-            .++...+.++.++|.++|..+|.+|++++++.++-+
T Consensus       255 FDG~~lk~Lr~rvl------~gk~------------rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W  308 (596)
T KOG0586|consen  255 FDGQNLKELRPRVL------RGKY------------RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW  308 (596)
T ss_pred             cCCcccccccchhe------eeee------------cccceeechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence            98765443221110      0000            112233567889999999999999999999998644


No 296
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00  E-value=5.9e-37  Score=262.71  Aligned_cols=223  Identities=27%  Similarity=0.321  Sum_probs=166.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++..++..++||||+++++|.++.... ..+++..++.++.||+.||.|||+.+   ++
T Consensus        47 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~  122 (286)
T cd07846          47 AMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHN---II  122 (286)
T ss_pred             HHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            578999999999999999999999999999999999998888876443 45899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+|+||+++.++.++|+|||++........  ......++..|+|||++.+ ..++.++||||||+++|||++|.+|
T Consensus       123 h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~  200 (286)
T cd07846         123 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPL  200 (286)
T ss_pred             ccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999876543321  1223457889999999875 4578899999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhcc--------ccccccccCCccCC-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGE--------RRRFYRLIDPRLEG-----HFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      |...........+.........        .........+....     ......+..+.+|+.+||+.+|++||++.++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i  280 (286)
T cd07846         201 FPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL  280 (286)
T ss_pred             CCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH
Confidence            8654321110000000000000        00000000000000     0011235789999999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      +++
T Consensus       281 l~~  283 (286)
T cd07846         281 LHH  283 (286)
T ss_pred             hcC
Confidence            985


No 297
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00  E-value=4e-37  Score=259.88  Aligned_cols=207  Identities=25%  Similarity=0.329  Sum_probs=170.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++||||+++++++.+++..++|+||+.+++|.+++... ..+++..+..++.|+++||.|||+.+   ++
T Consensus        47 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~---i~  122 (258)
T cd05578          47 VLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG---II  122 (258)
T ss_pred             HHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            578999999999999999999999999999999999999999999665 47899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++.......   ......|+..|+|||++.+..++.++|+||||+++|+|++|..||
T Consensus       123 h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  199 (258)
T cd05578         123 HRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY  199 (258)
T ss_pred             ccCCCHHHeEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCC
Confidence            99999999999999999999999988754332   123356788999999998888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH--HHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM--SEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--~ell~~  230 (306)
                      ...........    ......           .....+...+..+.++|.+||+.||.+||++  +|++++
T Consensus       200 ~~~~~~~~~~~----~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         200 RGHSRTIRDQI----RAKQET-----------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             CCCCccHHHHH----HHHhcc-----------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence            86543211111    100000           0111222345789999999999999999999  777653


No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00  E-value=1.9e-36  Score=262.32  Aligned_cols=205  Identities=29%  Similarity=0.403  Sum_probs=166.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++||||+++++++.+++..++||||+. |+|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        62 ~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~  137 (307)
T cd06607          62 IIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RI  137 (307)
T ss_pred             HHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ce
Confidence            5789999999999999999999999999999999996 5888877665567999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||+|+||+++.++.++|+|||++......      ....++..|+|||++.   ...++.++||||||+++|||++|.
T Consensus       138 H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~  211 (307)
T cd06607         138 HRDIKAGNILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (307)
T ss_pred             ecCCCcccEEECCCCCEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCC
Confidence            9999999999999999999999998764322      2345788899999874   456889999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .||..........       .....      ..+..   .....+..+.+++.+||..+|++||++.+++.+..
T Consensus       212 ~p~~~~~~~~~~~-------~~~~~------~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  269 (307)
T cd06607         212 PPLFNMNAMSALY-------HIAQN------DSPTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF  269 (307)
T ss_pred             CCCCCccHHHHHH-------HHhcC------CCCCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence            9986543211100       00000      00111   11234578999999999999999999999998653


No 299
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00  E-value=1.1e-36  Score=260.29  Aligned_cols=200  Identities=26%  Similarity=0.334  Sum_probs=159.9

Q ss_pred             HhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 021891            9 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTS   88 (306)
Q Consensus         9 l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~   88 (306)
                      +....||||+.+++++...+..++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+   ++||||||+
T Consensus        51 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~  126 (279)
T cd05633          51 VSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPA  126 (279)
T ss_pred             HhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHH
Confidence            334479999999999999999999999999999999886544 6999999999999999999999998   999999999


Q ss_pred             CeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCC
Q 021891           89 NILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN  167 (306)
Q Consensus        89 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  167 (306)
                      ||+++.++.++|+|||++.......    .....|+..|+|||.+. +..++.++||||+||++|+|++|..||......
T Consensus       127 Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  202 (279)
T cd05633         127 NILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK  202 (279)
T ss_pred             HEEECCCCCEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc
Confidence            9999999999999999987543321    12346899999999986 456899999999999999999999999765332


Q ss_pred             CCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          168 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      .......   ...        ...    ..++...+.++.++|.+||..||.+||     |++++++|.
T Consensus       203 ~~~~~~~---~~~--------~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~  256 (279)
T cd05633         203 DKHEIDR---MTL--------TVN----VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV  256 (279)
T ss_pred             CHHHHHH---Hhh--------cCC----cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence            2111100   000        001    112223457889999999999999999     599998864


No 300
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00  E-value=1.9e-36  Score=258.47  Aligned_cols=206  Identities=26%  Similarity=0.391  Sum_probs=166.8

Q ss_pred             HHHHHHHHhcCC---CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLV---HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~---H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +++|++++++++   ||||+++++++..+...++||||+++++|.+++...  .+++..++.++.|++.||.|||+.+  
T Consensus        46 ~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~--  121 (277)
T cd06917          46 IQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG--  121 (277)
T ss_pred             HHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            678999999996   999999999999999999999999999999988543  6899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg  157 (306)
                       ++|+||+|+||+++.++.++|+|||++........  ......|+..|+|||.+.+ ..++.++|+|||||++|+|++|
T Consensus       122 -i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g  198 (277)
T cd06917         122 -VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG  198 (277)
T ss_pred             -cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhC
Confidence             99999999999999999999999999987654331  1233468889999998874 4578999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ..||............       .      ....+.+...   ..+.++.+++.+||+.||++||++.+++.+
T Consensus       199 ~~p~~~~~~~~~~~~~-------~------~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         199 NPPYSDVDAFRAMMLI-------P------KSKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             CCCCCCCChhhhhhcc-------c------cCCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            9999754322111000       0      0001111111   134688999999999999999999999985


No 301
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00  E-value=2.2e-36  Score=259.90  Aligned_cols=223  Identities=22%  Similarity=0.287  Sum_probs=164.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++..++..++||||+. ++|.+.+......+++..+..++.|++.||.|||+.+   ++
T Consensus        50 ~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~  125 (291)
T cd07870          50 AIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---IL  125 (291)
T ss_pred             HHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            5689999999999999999999999999999999995 6887777665556888999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||||+||+++.++.+||+|||+++.......  ......++..|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus       126 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  203 (291)
T cd07870         126 HRDLKPQNLLISYLGELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPA  203 (291)
T ss_pred             cCCCChHHEEEcCCCcEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876432211  1223456889999999875 4578999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhh---------hcccccc-ccccCCccCCCC-----CHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          161 MDKNRPNGEHNLVEWARPH---------LGERRRF-YRLIDPRLEGHF-----SIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      |.............+....         ....... ............     ....+..+.+++.+||..||.+|||+.
T Consensus       204 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~  283 (291)
T cd07870         204 FPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQ  283 (291)
T ss_pred             CCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHH
Confidence            9754432110000000000         0000000 000000000000     001145788999999999999999999


Q ss_pred             HHHHH
Q 021891          226 EVVEA  230 (306)
Q Consensus       226 ell~~  230 (306)
                      |++.|
T Consensus       284 ~~l~h  288 (291)
T cd07870         284 DALLH  288 (291)
T ss_pred             HHhcC
Confidence            99875


No 302
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00  E-value=2.5e-36  Score=255.61  Aligned_cols=209  Identities=26%  Similarity=0.373  Sum_probs=171.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~i   80 (306)
                      |.+|++++.+++|+||+++++++...+..++||||+++++|.+++... ..+++..++.++.|++.||.|||+ .+   +
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~---~  121 (264)
T cd06623          46 LLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH---I  121 (264)
T ss_pred             HHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC---C
Confidence            678999999999999999999999999999999999999999999665 478999999999999999999999 88   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+||+|+||+++.++.++|+|||++.........  .....++..|+|||.+.+..++.++|+||||+++|+|++|..|
T Consensus       122 ~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p  199 (264)
T cd06623         122 IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFP  199 (264)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCccceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999998875432221  1234578899999999888899999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK-GAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |................          ....+.    .+.. .+..+.++|.+||..+|++|||+.+++++
T Consensus       200 ~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         200 FLPPGQPSFFELMQAIC----------DGPPPS----LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CccccccCHHHHHHHHh----------cCCCCC----CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            97654311111111111          000011    1112 45789999999999999999999999985


No 303
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00  E-value=1.5e-36  Score=260.32  Aligned_cols=210  Identities=27%  Similarity=0.400  Sum_probs=170.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++...+..++|+||+++++|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        62 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~  138 (286)
T cd06614          62 IINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VI  138 (286)
T ss_pred             HHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            678999999999999999999999999999999999999999999776557999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++........  ......++..|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~  216 (286)
T cd06614         139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY  216 (286)
T ss_pred             eCCCChhhEEEcCCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999876433211  122345788999999998888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ..........  ...     . ..    . +...  .....+..+.++|.+||+.+|.+|||+.+++++.
T Consensus       217 ~~~~~~~~~~--~~~-----~-~~----~-~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  271 (286)
T cd06614         217 LREPPLRALF--LIT-----T-KG----I-PPLK--NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP  271 (286)
T ss_pred             CCCCHHHHHH--HHH-----h-cC----C-CCCc--chhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence            6543221100  000     0 00    0 0000  0112356889999999999999999999999853


No 304
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00  E-value=3e-36  Score=259.39  Aligned_cols=207  Identities=25%  Similarity=0.365  Sum_probs=168.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+.+++.++||||+++++++...+..++|+||+++++|.+++.+.  .+++..+..++.|++.||.|||+.+   ++
T Consensus        63 ~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~g---i~  137 (293)
T cd06647          63 IINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ---VI  137 (293)
T ss_pred             HHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC---Ee
Confidence            578999999999999999999999999999999999999999998653  4789999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||||+||+++.++.++|+|||++........  ......|+..|+|||.+....++.++||||||+++|+|++|..||
T Consensus       138 H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf  215 (293)
T cd06647         138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (293)
T ss_pred             eccCCHHHEEEcCCCCEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999998876543322  223346788999999998888999999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .............      ...       .+..  ......+..+.+++.+||..+|++||++.+++.|
T Consensus       216 ~~~~~~~~~~~~~------~~~-------~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         216 LNENPLRALYLIA------TNG-------TPEL--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             CCCChhhheeehh------cCC-------CCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            7654322111000      000       0000  0122235678899999999999999999999986


No 305
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00  E-value=2.8e-36  Score=254.19  Aligned_cols=211  Identities=27%  Similarity=0.397  Sum_probs=172.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++|+||+++++++...  +..++|+||+++++|.+++.+.. .+++..++.++.|++.||.|||+.+   
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~---  121 (260)
T cd06606          46 LEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG---  121 (260)
T ss_pred             HHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            67899999999999999999999988  88999999999999999987655 8999999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      ++|+||+|+||+++.++.++|+|||.+................++..|+|||.+.+..++.++||||||+++++|++|..
T Consensus       122 ~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  201 (260)
T cd06606         122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP  201 (260)
T ss_pred             ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999987654432111234567889999999988889999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ||.....     .......          ..........+...+..+.+++.+||+.||++||++.+++++-
T Consensus       202 p~~~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~  258 (260)
T cd06606         202 PWSELGN-----PMAALYK----------IGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHP  258 (260)
T ss_pred             CCCCCCc-----hHHHHHh----------ccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence            9976541     0000000          0000111112223367899999999999999999999999863


No 306
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00  E-value=3.6e-36  Score=256.83  Aligned_cols=205  Identities=25%  Similarity=0.387  Sum_probs=168.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++++++++||||+++++++..++..++||||+++++|.+++...  .+++..+..++.|++.|+.|||+.+   ++
T Consensus        49 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~  123 (277)
T cd06641          49 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEK---KI  123 (277)
T ss_pred             HHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCC---ee
Confidence            678999999999999999999999999999999999999999988543  5899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+..++.++|+|||||++|+|++|..||
T Consensus       124 h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~  201 (277)
T cd06641         124 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPH  201 (277)
T ss_pred             cCCCCHHhEEECCCCCEEEeecccceecccchh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999876543221  122346788999999998888899999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ........   ...    ....      ..+    .+....+..+.+++.+||+.+|.+||++.+++++
T Consensus       202 ~~~~~~~~---~~~----~~~~------~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         202 SELHPMKV---LFL----IPKN------NPP----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CccchHHH---HHH----HhcC------CCC----CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            65332110   000    0000      001    1122335678899999999999999999999996


No 307
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=100.00  E-value=2.6e-36  Score=253.33  Aligned_cols=208  Identities=26%  Similarity=0.401  Sum_probs=171.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++..+...++++||+++++|.+++......+++..+..++.|++.||.+||..+   ++
T Consensus        44 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~  120 (253)
T cd05122          44 IINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---II  120 (253)
T ss_pred             HHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---Ee
Confidence            678999999999999999999999999999999999999999998776567999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||.+........   .....++..|+|||.+.+..++.++||||||+++|+|++|..||
T Consensus       121 h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  197 (253)
T cd05122         121 HRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY  197 (253)
T ss_pred             cCCCCHHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987654322   23456788999999998888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ............   .   .  ........       ....+..+.++|.+||+.||++|||+.+++++
T Consensus       198 ~~~~~~~~~~~~---~---~--~~~~~~~~-------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         198 SELPPMKALFKI---A---T--NGPPGLRN-------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             CCCchHHHHHHH---H---h--cCCCCcCc-------ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            754321111000   0   0  00000000       11124679999999999999999999999976


No 308
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=100.00  E-value=9.3e-37  Score=261.27  Aligned_cols=220  Identities=25%  Similarity=0.357  Sum_probs=164.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++||||+++++++.+.+..++||||+. ++|.+++... ...+++..++.++.|++.||+|||+.+   +
T Consensus        46 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i  121 (284)
T cd07860          46 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---V  121 (284)
T ss_pred             HHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            6789999999999999999999999999999999996 5898888543 456899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC-CCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~  159 (306)
                      +|+||+|+||+++.++.+||+|||++.........  .....++..|+|||++.+.. ++.++|||||||++|+|+||+.
T Consensus       122 ~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~  199 (284)
T cd07860         122 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA  199 (284)
T ss_pred             ecCCCCHHHEEECCCCCEEEeeccchhhcccCccc--cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999999999999998765332211  12234678899999887644 6889999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhh----------hcc----ccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          160 SMDKNRPNGEHNLVEWARPH----------LGE----RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      ||........  ........          ...    ...+........ .......+..+.++|.+||+.||.+|||+.
T Consensus       200 p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  276 (284)
T cd07860         200 LFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAK  276 (284)
T ss_pred             CCCCCCHHHH--HHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHH
Confidence            9975432111  00000000          000    000000000000 000112346788999999999999999999


Q ss_pred             HHHHH
Q 021891          226 EVVEA  230 (306)
Q Consensus       226 ell~~  230 (306)
                      +++++
T Consensus       277 ~~l~~  281 (284)
T cd07860         277 AALAH  281 (284)
T ss_pred             HHhcC
Confidence            99975


No 309
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00  E-value=1.9e-36  Score=262.50  Aligned_cols=225  Identities=24%  Similarity=0.314  Sum_probs=164.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC--------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD--------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~--------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      +.+|++++++++||||+++++++...+        ..++||||+. ++|.+.+......+++..++.++.||+.||.|||
T Consensus        58 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  136 (310)
T cd07865          58 ALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH  136 (310)
T ss_pred             HHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            357999999999999999999987654        4599999996 5888888766667999999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc--eeeecccccccccCCcchhcC-CCCchhHHHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVV  150 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~i  150 (306)
                      +.+   ++|+||||+||+++.++.+||+|||++.........  .......++..|+|||++.+. .++.++||||||++
T Consensus       137 ~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~  213 (310)
T cd07865         137 RNK---ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI  213 (310)
T ss_pred             HCC---eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence            988   999999999999999999999999999765432221  112234578889999988654 47889999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcchHHhhhhhhc-----cccc---cccccCCc-cCCCC-----CHHHHHHHHHHHHHcccC
Q 021891          151 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-----ERRR---FYRLIDPR-LEGHF-----SIKGAQKAAQLAAHCLSR  216 (306)
Q Consensus       151 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~-~~~~~-----~~~~~~~~~~li~~~l~~  216 (306)
                      +|+|++|..||...........+........     ....   +.....+. .....     ....+..+.+||.+||..
T Consensus       214 l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~  293 (310)
T cd07865         214 MAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVL  293 (310)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcC
Confidence            9999999999976543221111111100000     0000   00000000 00000     001135678999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 021891          217 DPKARPLMSEVVEA  230 (306)
Q Consensus       217 ~p~~Rps~~ell~~  230 (306)
                      ||.+|||+.++++|
T Consensus       294 ~P~~R~t~~e~l~h  307 (310)
T cd07865         294 DPAKRIDADTALNH  307 (310)
T ss_pred             ChhhccCHHHHhcC
Confidence            99999999999986


No 310
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=100.00  E-value=3.3e-36  Score=261.70  Aligned_cols=225  Identities=23%  Similarity=0.293  Sum_probs=165.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRR----SLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|++++++++||||+++++++.+.  +..++||||+++ +|.+.+...    ...+++..++.++.|++.||.|||+.
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  127 (316)
T cd07842          49 ACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN  127 (316)
T ss_pred             HHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999988  789999999965 777766422    23689999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcC----CCcEEEeccCCcccCCCCCc-ceeeecccccccccCCcchhc-CCCCchhHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDA----DYNAKLSDFGLAKDGPEGDK-THVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGV  149 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~----~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~  149 (306)
                      +   ++||||||+||+++.    ++.+||+|||+++....... ........++..|+|||++.+ ..++.++|||||||
T Consensus       128 ~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~  204 (316)
T cd07842         128 W---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGC  204 (316)
T ss_pred             C---EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHH
Confidence            8   999999999999999    89999999999987543322 112233467889999998875 46899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcc------hHHhhhhhhc-----------ccccccc---ccC-CccC-CC----CCH--H
Q 021891          150 VLLEMLTGRRSMDKNRPNGEHN------LVEWARPHLG-----------ERRRFYR---LID-PRLE-GH----FSI--K  201 (306)
Q Consensus       150 il~elltg~~pf~~~~~~~~~~------~~~~~~~~~~-----------~~~~~~~---~~~-~~~~-~~----~~~--~  201 (306)
                      ++|+|++|.+||..........      ........+.           ....+..   ... .... ..    +..  .
T Consensus       205 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (316)
T cd07842         205 IFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKK  284 (316)
T ss_pred             HHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccC
Confidence            9999999999997654432100      0000000000           0000000   000 0000 00    000  2


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          202 GAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       202 ~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .+..+.+++.+||+.||++|||+.|++++
T Consensus       285 ~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         285 PDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            34578999999999999999999999986


No 311
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00  E-value=2.5e-36  Score=259.57  Aligned_cols=209  Identities=29%  Similarity=0.377  Sum_probs=163.4

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeC-----CeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIED-----DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      +.+|+.+++++ +||||+++++++...     +..++||||+++++|.+++..   ....+++..++.++.|++.||.||
T Consensus        65 ~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l  144 (291)
T cd06639          65 IEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL  144 (291)
T ss_pred             HHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            56799999999 899999999998754     358999999999999998753   345689999999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-----CCCchhHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-----HLTSRSDVYSF  147 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Diwsl  147 (306)
                      |+.+   ++|+||||+||+++.++.+||+|||++........  ......|+..|+|||.+...     .++.++|||||
T Consensus       145 H~~~---ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl  219 (291)
T cd06639         145 HNNR---IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL  219 (291)
T ss_pred             HhCC---eeccCCCHHHEEEcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHH
Confidence            9988   99999999999999999999999999876543221  12234678899999987643     36889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          148 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       148 G~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      ||++|+|++|+.||........  ...+.     . .......+       +......+.+||.+||+.+|++||++.++
T Consensus       220 Gvi~~el~~g~~p~~~~~~~~~--~~~~~-----~-~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~i  284 (291)
T cd06639         220 GITAIELGDGDPPLFDMHPVKT--LFKIP-----R-NPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHL  284 (291)
T ss_pred             HHHHHHHhhCCCCCCCCcHHHH--HHHHh-----c-CCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHH
Confidence            9999999999999975432111  10000     0 00000011       11234578999999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      ++|
T Consensus       285 l~~  287 (291)
T cd06639         285 LEH  287 (291)
T ss_pred             hcC
Confidence            986


No 312
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00  E-value=6.6e-36  Score=260.08  Aligned_cols=209  Identities=27%  Similarity=0.384  Sum_probs=168.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+|++++++++.+++..++||||+.+ +|.+.+......+++..+..++.|++.||.|||+.+   ++
T Consensus        72 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~  147 (317)
T cd06635          72 IIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MI  147 (317)
T ss_pred             HHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            56899999999999999999999999999999999964 888887666667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||+|+||+++.++.++|+|||++.....      .....|+..|+|||++.   ...++.++|||||||++|+|++|.
T Consensus       148 H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~  221 (317)
T cd06635         148 HRDIKAGNILLTEPGQVKLADFGSASIASP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  221 (317)
T ss_pred             cCCCCcccEEECCCCCEEEecCCCccccCC------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC
Confidence            999999999999999999999999875432      12346788999999974   456889999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  236 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  236 (306)
                      .||...........  +.    ...       .+.   ......+..+.+++.+||+.+|.+||++.++++++.....
T Consensus       222 ~p~~~~~~~~~~~~--~~----~~~-------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         222 PPLFNMNAMSALYH--IA----QNE-------SPT---LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             CCCCCccHHHHHHH--HH----hcc-------CCC---CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence            99865422111000  00    000       000   0111234678999999999999999999999998765443


No 313
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00  E-value=1.6e-36  Score=259.50  Aligned_cols=220  Identities=25%  Similarity=0.335  Sum_probs=170.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++.+++..++|+||+++ +|.+++......+++..+..++.|++.||.|||+.+   ++
T Consensus        45 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~  120 (283)
T cd05118          45 ALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---IL  120 (283)
T ss_pred             HHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            56899999999999999999999999999999999965 898888776668999999999999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||||+||+++.++.++|+|||.+........  ......++..|+|||.+.+. .++.++||||||+++|+|++|+.|
T Consensus       121 H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~  198 (283)
T cd05118         121 HRDLKPENLLINTEGVLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPL  198 (283)
T ss_pred             ecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999977644321  12234578889999998876 789999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhcc-----cccccc--------cc--CCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGE-----RRRFYR--------LI--DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--------~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      |......+.....   ......     ...+..        ..  ............+.++.++|.+||+.||.+||++.
T Consensus       199 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~  275 (283)
T cd05118         199 FPGKSEIDQLFKI---FRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAE  275 (283)
T ss_pred             CCCCCHHHHHHHH---HHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHH
Confidence            9765432211110   000000     000000        00  00000111223567899999999999999999999


Q ss_pred             HHHHH
Q 021891          226 EVVEA  230 (306)
Q Consensus       226 ell~~  230 (306)
                      +++.+
T Consensus       276 ~ll~~  280 (283)
T cd05118         276 QALAH  280 (283)
T ss_pred             HHhhC
Confidence            99985


No 314
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00  E-value=3.5e-36  Score=257.34  Aligned_cols=217  Identities=24%  Similarity=0.314  Sum_probs=164.1

Q ss_pred             HHHHHHHhcCC-CCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            3 QAEVNFLGDLV-HLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         3 ~~E~~il~~l~-H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      .+|+.++.++. |+||+++++++.+.  +..++||||+. ++|.+.+......+++..++.++.|++.||.|||+.+   
T Consensus        45 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---  120 (282)
T cd07831          45 LREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---  120 (282)
T ss_pred             HHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            46888899885 99999999999987  88999999996 5888888765567999999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++||||+|+||+++. +.+||+|||+++.......   .....++..|+|||++. +..++.++|||||||++|||++|.
T Consensus       121 i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~  196 (282)
T cd07831         121 IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLF  196 (282)
T ss_pred             ceecccCHHHEEEcC-CCeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCC
Confidence            999999999999999 9999999999986543221   12245788999999765 456788999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccc-c------ccccccCCccC-------CCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGER-R------RFYRLIDPRLE-------GHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      .||......+.   ........... .      ......+....       .......+..+.+||.+||+.+|++||++
T Consensus       197 ~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  273 (282)
T cd07831         197 PLFPGTNELDQ---IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITA  273 (282)
T ss_pred             cCCCCCCHHHH---HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCH
Confidence            99976543221   11111000000 0      00000000000       00112346789999999999999999999


Q ss_pred             HHHHHH
Q 021891          225 SEVVEA  230 (306)
Q Consensus       225 ~ell~~  230 (306)
                      .+++++
T Consensus       274 ~~~l~~  279 (282)
T cd07831         274 KQALRH  279 (282)
T ss_pred             HHHhhC
Confidence            999986


No 315
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00  E-value=4.8e-37  Score=271.58  Aligned_cols=202  Identities=26%  Similarity=0.272  Sum_probs=165.1

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .+|+.++... +|+||+++.+.+.++.+.|+|||.+.|+-|.+.+....  .....+..|+++|+.|+.|||++|   ++
T Consensus       363 ~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~g---vv  437 (612)
T KOG0603|consen  363 QDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQG---VV  437 (612)
T ss_pred             ccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcC---ee
Confidence            4566666555 89999999999999999999999999998888875543  233777889999999999999999   99


Q ss_pred             eccCCCCCeEE-cCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILL-DADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      ||||||+|||+ +..|.++|+|||.++.....     ....+-|..|.|||++...+|++++|+||||++||+|++|+.|
T Consensus       438 hRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp  512 (612)
T KOG0603|consen  438 HRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTL  512 (612)
T ss_pred             ecCCChhheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCc
Confidence            99999999999 68899999999999876543     2223457889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      |.......  +..              .   ....+.+....+..+.+|+.+||+.||.+|+++.++..|-..
T Consensus       513 ~~~~P~~~--ei~--------------~---~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  513 FAAHPAGI--EIH--------------T---RIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             cccCCchH--HHH--------------H---hhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            97654330  000              0   011122234557899999999999999999999999987654


No 316
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00  E-value=2.2e-36  Score=255.01  Aligned_cols=207  Identities=22%  Similarity=0.366  Sum_probs=167.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +++|+++++.++|+||+++++.+......++|+||+++++|.+++.+.. ..+++..+..++.|++.||.|||+.+   +
T Consensus        46 ~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i  122 (257)
T cd08225          46 SKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---I  122 (257)
T ss_pred             HHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            5789999999999999999999999999999999999999999986543 35899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCC-cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      +|+||||+||+++.++ .+||+|||.+........  ......|+..|+|||+..+..++.++|+||||+++++|++|..
T Consensus       123 ~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08225         123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH  200 (257)
T ss_pred             ccccCCHHHEEEcCCCCeEEecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999998886 469999999876543221  1223457889999999988889999999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ||......      .........      ...     ......+.++.+++.+||..+|++|||+.+++++
T Consensus       201 p~~~~~~~------~~~~~~~~~------~~~-----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         201 PFEGNNLH------QLVLKICQG------YFA-----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCCCccHH------HHHHHHhcc------cCC-----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            98654321      111111100      000     0111234679999999999999999999999986


No 317
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00  E-value=2.8e-36  Score=261.50  Aligned_cols=224  Identities=25%  Similarity=0.302  Sum_probs=165.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++|+||+++++++...  +..++||||+. ++|.+++......+++..++.++.|++.||.|||+.+   
T Consensus        53 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---  128 (309)
T cd07845          53 SLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---  128 (309)
T ss_pred             hhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            45799999999999999999998765  46899999996 4898888766567999999999999999999999998   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++||||||+||+++.++.+||+|||++.........  .....++..|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus       129 i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~  206 (309)
T cd07845         129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK  206 (309)
T ss_pred             eecCCCCHHHEEECCCCCEEECccceeeecCCccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999875433211  122345778999999875 56799999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhh--------hhccccccccc-cCCccCCCC---CHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARP--------HLGERRRFYRL-IDPRLEGHF---SIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      +||...........+.....        ........... .........   ....+..+.++|.+||+.||++|||+.+
T Consensus       207 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~  286 (309)
T cd07845         207 PLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEE  286 (309)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence            99976543222111110000        00000000000 000000000   0113567889999999999999999999


Q ss_pred             HHHHh
Q 021891          227 VVEAL  231 (306)
Q Consensus       227 ll~~l  231 (306)
                      +++|.
T Consensus       287 il~h~  291 (309)
T cd07845         287 ALESS  291 (309)
T ss_pred             HhcCh
Confidence            99864


No 318
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00  E-value=2.8e-36  Score=254.17  Aligned_cols=206  Identities=24%  Similarity=0.331  Sum_probs=170.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +.+|++++++++|+||+++++++.+....++||||+++++|.+++.+.   ...+++..++.++.|++.||.|||+.+  
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--  123 (256)
T cd08530          46 AVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--  123 (256)
T ss_pred             HHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--
Confidence            568999999999999999999999999999999999999999988652   346899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ++|+||+|+||+++.++.+||+|||++......    ......++..|++||.+.+..++.++|+||||+++|+|++|.
T Consensus       124 -i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~  198 (256)
T cd08530         124 -ILHRDLKSANILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA  198 (256)
T ss_pred             -cccCCCCcceEEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCC
Confidence             999999999999999999999999999876543    122345788999999999888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||.......   .....              ........+...+.++.+++.+||+.+|++||++.+++++.
T Consensus       199 ~p~~~~~~~~---~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p  254 (256)
T cd08530         199 PPFEARSMQD---LRYKV--------------QRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP  254 (256)
T ss_pred             CCCCCCCHHH---HHHHH--------------hcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence            9997543211   00000              00011112224567899999999999999999999999863


No 319
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00  E-value=3.5e-36  Score=265.64  Aligned_cols=220  Identities=23%  Similarity=0.275  Sum_probs=164.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+++++.++|+||+++++++...      ...++||||+. ++|.+.+...   +++..+..++.|++.||.|||+.
T Consensus        62 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~  137 (353)
T cd07850          62 AYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSA  137 (353)
T ss_pred             HHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhC
Confidence            45799999999999999999988654      35799999995 5888877543   88999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      +   ++||||||+||+++.++.+||+|||+++.......   .....++..|+|||++.+..++.++|||||||++|+|+
T Consensus       138 g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~  211 (353)
T cd07850         138 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI  211 (353)
T ss_pred             C---eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHH
Confidence            8   99999999999999999999999999987543221   22345788999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchH------------Hhhh----hhhccc-----cccccccCCc----cCCCCCHHHHHHHHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLV------------EWAR----PHLGER-----RRFYRLIDPR----LEGHFSIKGAQKAAQLA  210 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~------------~~~~----~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~li  210 (306)
                      +|..||...........+            ....    ......     ..+.......    .........+..+.++|
T Consensus       212 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  291 (353)
T cd07850         212 RGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLL  291 (353)
T ss_pred             HCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHH
Confidence            999999754321110000            0000    000000     0000111000    00001123456789999


Q ss_pred             HHcccCCCCCCCCHHHHHHHh
Q 021891          211 AHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       211 ~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .+||+.||++|||+.|++++-
T Consensus       292 ~~~L~~dP~~R~t~~eiL~~~  312 (353)
T cd07850         292 SKMLVIDPEKRISVDDALQHP  312 (353)
T ss_pred             HHHcCCChhhCcCHHHHhcCh
Confidence            999999999999999999864


No 320
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00  E-value=5.6e-36  Score=253.55  Aligned_cols=211  Identities=30%  Similarity=0.440  Sum_probs=168.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++...+..++|+||+++++|.+++... ..+++..++.++.|++.||.|||+.+   ++
T Consensus        46 ~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~  121 (264)
T cd06626          46 IADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG---IV  121 (264)
T ss_pred             HHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            678999999999999999999999999999999999999999998654 35889999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCccee--eecccccccccCCcchhcCC---CCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHV--STRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~ellt  156 (306)
                      |+||+|+||+++.++.+||+|||++...........  .....++..|+|||++.+..   ++.++||||||+++|+|++
T Consensus       122 H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~  201 (264)
T cd06626         122 HRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT  201 (264)
T ss_pred             cCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh
Confidence            999999999999999999999999987544322111  11345788999999998765   8899999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |..||.......   ...+.... .        ..+....  ....+..+.+++.+||+.+|.+|||+.+++.+
T Consensus       202 g~~pf~~~~~~~---~~~~~~~~-~--------~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         202 GKRPWSELDNEF---QIMFHVGA-G--------HKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             CCCCccCCcchH---HHHHHHhc-C--------CCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            999997543111   11110000 0        0111111  11225678899999999999999999999875


No 321
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00  E-value=2.8e-36  Score=258.19  Aligned_cols=221  Identities=23%  Similarity=0.306  Sum_probs=165.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++|+||+++++++.+.+..++||||++ ++|.+++.... ..+++..++.++.|++.||.|||+.+   +
T Consensus        45 ~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~  120 (283)
T cd07835          45 AIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---V  120 (283)
T ss_pred             HHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            5689999999999999999999999999999999995 68999886543 46899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~  159 (306)
                      +|+||+|+||+++.++.++|+|||++.........  .....++..|+|||++.+. .++.++||||||+++|+|++|+.
T Consensus       121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  198 (283)
T cd07835         121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRP  198 (283)
T ss_pred             eCCCCCHHHEEEcCCCcEEEeecccccccCCCccc--cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999764332111  1223467889999987654 57899999999999999999999


Q ss_pred             CCCCCCCCCCcchHHhhhhh----------hccccccccccC---CccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          160 SMDKNRPNGEHNLVEWARPH----------LGERRRFYRLID---PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ||........  ........          ......+...+.   ...........+..+.++|.+||+.||.+|||++|
T Consensus       199 pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  276 (283)
T cd07835         199 LFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKA  276 (283)
T ss_pred             CCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence            9976433211  00000000          000000000000   00000111123467889999999999999999999


Q ss_pred             HHHH
Q 021891          227 VVEA  230 (306)
Q Consensus       227 ll~~  230 (306)
                      ++++
T Consensus       277 il~~  280 (283)
T cd07835         277 ALQH  280 (283)
T ss_pred             HhcC
Confidence            9975


No 322
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00  E-value=4.3e-36  Score=258.23  Aligned_cols=207  Identities=26%  Similarity=0.386  Sum_probs=167.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|+.+++.++|+||+++++++..++..++||||+++++|.+++...  .+++..+..++.|++.||+|||+.+   ++
T Consensus        64 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~g---iv  138 (292)
T cd06657          64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQG---VI  138 (292)
T ss_pred             HHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            678999999999999999999999999999999999999999977433  5899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++.......  .......|+..|+|||.+.+..++.++|+||+|+++|+|++|..||
T Consensus       139 H~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~  216 (292)
T cd06657         139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  216 (292)
T ss_pred             cCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999987643321  1123356788999999998888899999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ........   ......          ........  ....+..+.+++.+||+.+|.+||++.+++++
T Consensus       217 ~~~~~~~~---~~~~~~----------~~~~~~~~--~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         217 FNEPPLKA---MKMIRD----------NLPPKLKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             CCCCHHHH---HHHHHh----------hCCcccCC--cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            75432111   110000          00111000  01224578899999999999999999999985


No 323
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00  E-value=4.1e-36  Score=257.81  Aligned_cols=211  Identities=28%  Similarity=0.365  Sum_probs=162.7

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHh---h-cCCCCCCHHHHHHHHHHHHHHHHHhhcC-
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---F-RRSLPLPWSIRMKIALGAAKGLAFLHEE-   75 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l---~-~~~~~l~~~~~~~~~~qi~~~l~~LH~~-   75 (306)
                      +.+|+.++.++. |+||+++++++..++..+++|||+. ++|.++.   . .....+++..+..++.|++.||+|||+. 
T Consensus        49 ~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~  127 (288)
T cd06616          49 LLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL  127 (288)
T ss_pred             HHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            678999999995 9999999999999999999999995 4665543   2 2235799999999999999999999974 


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC---CCCchhHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLL  152 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~  152 (306)
                      +   ++||||||+||+++.++.+||+|||+++.......   .....|+..|+|||++.+.   .++.++|||||||++|
T Consensus       128 ~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  201 (288)
T cd06616         128 K---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY  201 (288)
T ss_pred             C---eeccCCCHHHEEEccCCcEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHH
Confidence            6   99999999999999999999999999976533211   1233578899999998765   6899999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +|++|+.||.....     .........       ....+..........+..+.+|+.+||+.||++|||+.+|+++-
T Consensus       202 el~~g~~p~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~  268 (288)
T cd06616         202 EVATGKFPYPKWNS-----VFDQLTQVV-------KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP  268 (288)
T ss_pred             HHHhCCCCchhcch-----HHHHHhhhc-------CCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            99999999975431     111000000       00011111111123457899999999999999999999999863


No 324
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=100.00  E-value=4.8e-36  Score=252.68  Aligned_cols=207  Identities=26%  Similarity=0.386  Sum_probs=171.0

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +.+|++++++++|+|++++++.+...+..++|+||+++++|.+++.+.   ...+++..+..++.|++.||.|||+.+  
T Consensus        46 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--  123 (258)
T cd08215          46 ALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--  123 (258)
T ss_pred             HHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            578999999999999999999999999999999999999999999765   367999999999999999999999998  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ++|+||+|+||+++.++.++|+|||.+.......  .......|+..|+|||...+..++.++|+||+|+++++|++|.
T Consensus       124 -~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~  200 (258)
T cd08215         124 -ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLK  200 (258)
T ss_pred             -EecccCChHHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCC
Confidence             9999999999999999999999999998754432  1233356888999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||.......   .   .......      . .+.    .+...+..+.+++.+||..+|++|||+.+++++
T Consensus       201 ~p~~~~~~~~---~---~~~~~~~------~-~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         201 HPFEGENLLE---L---ALKILKG------Q-YPP----IPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCCcHHH---H---HHHHhcC------C-CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            9986543211   1   1000000      0 011    111335688999999999999999999999985


No 325
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00  E-value=4.8e-36  Score=253.57  Aligned_cols=203  Identities=26%  Similarity=0.326  Sum_probs=159.5

Q ss_pred             HHHHH-HhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            4 AEVNF-LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         4 ~E~~i-l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .|..+ ...++|+||+++++++..++..++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+   ++|
T Consensus        45 ~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H  120 (260)
T cd05611          45 AERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRG---IIH  120 (260)
T ss_pred             HHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eec
Confidence            34443 44558999999999999999999999999999999998654 36899999999999999999999988   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      +||+|+||+++.++.++|+|||++.....      .....|+..|+|||.+.+..++.++||||||+++|+|++|..||.
T Consensus       121 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  194 (260)
T cd05611         121 RDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFH  194 (260)
T ss_pred             CCCCHHHeEECCCCcEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCC
Confidence            99999999999999999999999875432      223457889999999988889999999999999999999999996


Q ss_pred             CCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH---HHHHHH
Q 021891          163 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM---SEVVEA  230 (306)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---~ell~~  230 (306)
                      .......   ..  . .......        .........+..+.+++.+||+.||++||++   .|++.|
T Consensus       195 ~~~~~~~---~~--~-~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         195 AETPDAV---FD--N-ILSRRIN--------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             CCCHHHH---HH--H-HHhcccC--------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            5432111   00  0 0000000        0011111235789999999999999999966   465554


No 326
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00  E-value=1.5e-35  Score=251.65  Aligned_cols=194  Identities=22%  Similarity=0.280  Sum_probs=158.5

Q ss_pred             CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE
Q 021891           13 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL   92 (306)
Q Consensus        13 ~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill   92 (306)
                      +|+||+++++++...+..++||||+++++|.+++..+. .+++..+..++.|++.||.|||+.+   ++||||||+||++
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~  142 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLY  142 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEE
Confidence            79999999999999999999999999999999986654 7999999999999999999999998   9999999999999


Q ss_pred             cCCC-cEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 021891           93 DADY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN  171 (306)
Q Consensus        93 ~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~  171 (306)
                      +.++ .++|+|||+++.....      ....|+..|+|||++.+..++.++||||||+++|+|++|..||....... ..
T Consensus       143 ~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~  215 (267)
T PHA03390        143 DRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LD  215 (267)
T ss_pred             eCCCCeEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hh
Confidence            9988 9999999998765322      12357889999999998899999999999999999999999997443221 11


Q ss_pred             hHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 021891          172 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-MSEVVEA  230 (306)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-~~ell~~  230 (306)
                      ...+.... ..            ........+..+.++|.+||+.+|.+||+ ++++++|
T Consensus       216 ~~~~~~~~-~~------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        216 LESLLKRQ-QK------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             HHHHHHhh-cc------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            11111100 00            00111234578999999999999999996 6999975


No 327
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00  E-value=2e-36  Score=256.17  Aligned_cols=208  Identities=27%  Similarity=0.370  Sum_probs=166.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++.+..++..|+||||+.+++|.+++.+.+ .+++..++.++.||+.||.|||+.+   ++
T Consensus        40 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~---i~  115 (265)
T cd05579          40 VLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG---II  115 (265)
T ss_pred             HHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC---ee
Confidence            5789999999999999999999999999999999999999999986654 7899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCc------ceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK------THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      |+||+|+||+++.++.++|+|||++........      ........++..|+|||......++.++||||||+++|+|+
T Consensus       116 H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~  195 (265)
T cd05579         116 HRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL  195 (265)
T ss_pred             cCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence            999999999999999999999999876433211      11223345788899999998888999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH---HHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM---SEVVE  229 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---~ell~  229 (306)
                      +|..||...........      .....      ...  ....  ..+..+.+++.+||+.+|++|||+   .++++
T Consensus       196 ~g~~p~~~~~~~~~~~~------~~~~~------~~~--~~~~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         196 VGIPPFHGETPEEIFQN------ILNGK------IEW--PEDV--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             hCCCCCCCCCHHHHHHH------HhcCC------cCC--Cccc--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            99999975432211000      00000      000  0000  125788999999999999999999   65555


No 328
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00  E-value=9.9e-36  Score=252.33  Aligned_cols=209  Identities=22%  Similarity=0.300  Sum_probs=166.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      |++|++++++++|+||+++++++.+.  +.+++|+||+++++|.+++.... .+++..+..++.|++.||.|||+.+   
T Consensus        51 ~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~---  126 (264)
T cd06653          51 LECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM---  126 (264)
T ss_pred             HHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            67899999999999999999998764  46889999999999999986544 5889999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCc-ceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK-THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||||+||+++.++.++|+|||+++....... ........|+..|+|||++.+..++.++|+|||||++|+|++|.
T Consensus       127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  206 (264)
T cd06653         127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEK  206 (264)
T ss_pred             EecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999986532111 11112346788999999998888999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||........   .   ...          ........++...+..+.+++.+||+ +|..||++.+++.|.
T Consensus       207 ~p~~~~~~~~~---~---~~~----------~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~  262 (264)
T cd06653         207 PPWAEYEAMAA---I---FKI----------ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP  262 (264)
T ss_pred             CCCCccCHHHH---H---HHH----------HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence            99965322110   0   000          00011112233445789999999999 579999999998864


No 329
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00  E-value=6.7e-36  Score=255.32  Aligned_cols=202  Identities=25%  Similarity=0.324  Sum_probs=161.5

Q ss_pred             HHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 021891            7 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFK   86 (306)
Q Consensus         7 ~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlk   86 (306)
                      ++++...||||+++++++...+..++||||+.|++|.+++... ..+++..+..++.|++.||.|||+.+   ++|||||
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~  124 (278)
T cd05606          49 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLK  124 (278)
T ss_pred             HHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCC
Confidence            3445568999999999999999999999999999999988554 47999999999999999999999988   9999999


Q ss_pred             CCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 021891           87 TSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRSMDKNR  165 (306)
Q Consensus        87 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~pf~~~~  165 (306)
                      |+||+++.++.++|+|||++.......    .....|+..|+|||++.++ .++.++||||+||++|+|++|..||....
T Consensus       125 p~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~  200 (278)
T cd05606         125 PANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  200 (278)
T ss_pred             HHHEEECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999987653321    2234689999999998744 68999999999999999999999997653


Q ss_pred             CCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 021891          166 PNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEAL  231 (306)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~l  231 (306)
                      ..........   .        ......    ++...+..+.+++.+||..+|.+||     ++.+++++.
T Consensus       201 ~~~~~~~~~~---~--------~~~~~~----~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~  256 (278)
T cd05606         201 TKDKHEIDRM---T--------LTMAVE----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP  256 (278)
T ss_pred             ccchHHHHHH---h--------hccCCC----CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence            3221111000   0        000111    1222357899999999999999999     999998753


No 330
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=100.00  E-value=7.6e-36  Score=255.57  Aligned_cols=223  Identities=22%  Similarity=0.305  Sum_probs=166.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++|+||+++++++.+.+..++||||+++ +|.+++....  ..+++..+..++.|++.||.|||+.+   
T Consensus        45 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---  120 (284)
T cd07836          45 AIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---  120 (284)
T ss_pred             HHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            46799999999999999999999999999999999975 8888886543  46899999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||||+||+++.++.++|+|||++........  ......++..|++||++.+ ..++.++|||||||++|+|++|.
T Consensus       121 i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~  198 (284)
T cd07836         121 VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR  198 (284)
T ss_pred             eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999976433211  1123456888999998865 45789999999999999999999


Q ss_pred             CCCCCCCCCCCcchHH-hh-------hhhhccccccccccCC---ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          159 RSMDKNRPNGEHNLVE-WA-------RPHLGERRRFYRLIDP---RLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      .||......+....+. ..       ...+.....+......   .....+....+..+.+++.+||+.||.+||++.++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~  278 (284)
T cd07836         199 PLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA  278 (284)
T ss_pred             CCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH
Confidence            9997654322111100 00       0000000000000000   00001111235678999999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      +++
T Consensus       279 l~~  281 (284)
T cd07836         279 LQH  281 (284)
T ss_pred             hcC
Confidence            975


No 331
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=8.3e-37  Score=242.12  Aligned_cols=226  Identities=25%  Similarity=0.317  Sum_probs=172.6

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeC--------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIED--------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~--------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      .+|+++|..|+|+|++.+++.|...        ..+|+||++|+. +|..++.....+++...+.+++.++..||.|+|.
T Consensus        64 lreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr  142 (376)
T KOG0669|consen   64 LREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR  142 (376)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999988753        358999999965 9999998887889999999999999999999999


Q ss_pred             CCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce--eeecccccccccCCcchhc-CCCCchhHHHHHHHHH
Q 021891           75 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH--VSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVL  151 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  151 (306)
                      ..   |+|||+|++|+||+.+|.+||+|||+++.+.......  ..+..+-|.+|++||.+.| ..|+.+.|||+.|||+
T Consensus       143 ~k---ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCim  219 (376)
T KOG0669|consen  143 NK---ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIM  219 (376)
T ss_pred             hh---HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHH
Confidence            88   9999999999999999999999999998765432221  1123445999999999986 5799999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhhh-----hccccc--ccccc-CCccCCCC---------CHHHHHHHHHHHHHcc
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARPH-----LGERRR--FYRLI-DPRLEGHF---------SIKGAQKAAQLAAHCL  214 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~-~~~~~~~~---------~~~~~~~~~~li~~~l  214 (306)
                      .||+|+.+.++++........+...-..     |.+...  +++.+ .+.+....         +-.-.++..+|+.++|
T Consensus       220 aeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll  299 (376)
T KOG0669|consen  220 AEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLL  299 (376)
T ss_pred             HHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHh
Confidence            9999999999887655444333322211     111100  11111 00011000         0001247889999999


Q ss_pred             cCCCCCCCCHHHHHHHhC
Q 021891          215 SRDPKARPLMSEVVEALK  232 (306)
Q Consensus       215 ~~~p~~Rps~~ell~~l~  232 (306)
                      ..||.+|+++.+++.|-.
T Consensus       300 ~~DP~kR~~ad~alnh~~  317 (376)
T KOG0669|consen  300 KLDPTKRIDADQALNHDF  317 (376)
T ss_pred             ccCcccCcchHhhhchhh
Confidence            999999999999998753


No 332
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00  E-value=1.9e-35  Score=256.80  Aligned_cols=204  Identities=28%  Similarity=0.419  Sum_probs=164.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+|++++++++.+.+..++||||+. ++|.+.+......+++..+..++.|++.||.|||+.+   ++
T Consensus        68 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~  143 (313)
T cd06633          68 IIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MI  143 (313)
T ss_pred             HHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ee
Confidence            5689999999999999999999999999999999996 5888888766667999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |+||+|+||+++.++.+||+|||++.....      .....|+..|+|||++.   ...++.++|||||||++|+|++|.
T Consensus       144 H~dl~p~nili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~  217 (313)
T cd06633         144 HRDIKAGNILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  217 (313)
T ss_pred             cCCCChhhEEECCCCCEEEeecCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Confidence            999999999999999999999999864321      22356788999999984   456889999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .||.............      .  ..     .+..   .....+..+.+|+.+||+.+|.+||++.+++.+-
T Consensus       218 ~p~~~~~~~~~~~~~~------~--~~-----~~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~  274 (313)
T cd06633         218 PPLFNMNAMSALYHIA------Q--ND-----SPTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHD  274 (313)
T ss_pred             CCCCCCChHHHHHHHH------h--cC-----CCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            9987653321111000      0  00     0000   0112235688999999999999999999999863


No 333
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00  E-value=1.2e-35  Score=257.46  Aligned_cols=208  Identities=28%  Similarity=0.388  Sum_probs=166.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+|++++++++......++||||+. |+|.+.+......+++..+..++.|++.||.|||+.+   ++
T Consensus        62 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~  137 (308)
T cd06634          62 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MI  137 (308)
T ss_pred             HHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence            5689999999999999999999999999999999996 5888877665667899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      ||||+|+||+++.++.++|+|||++......      ....|+..|+|||.+.   ...++.++|||||||++|+|++|.
T Consensus       138 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~  211 (308)
T cd06634         138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (308)
T ss_pred             cCCCCHHhEEECCCCcEEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCC
Confidence            9999999999999999999999998764321      2345788999999975   356788999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLP  235 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  235 (306)
                      .||..........       .... .     ..+..   .....+..+.+||.+||+.+|++||++.+++++.....
T Consensus       212 ~p~~~~~~~~~~~-------~~~~-~-----~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         212 PPLFNMNAMSALY-------HIAQ-N-----ESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             CCCccccHHHHHH-------HHhh-c-----CCCCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            9986542211100       0000 0     00100   11133567899999999999999999999999865443


No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00  E-value=6.5e-36  Score=262.31  Aligned_cols=223  Identities=28%  Similarity=0.337  Sum_probs=164.5

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +.+|+.+++++ +|+||+++++++...  ...++||||+. ++|.+++...  .+++..++.++.||+.||.|||+.+  
T Consensus        53 ~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~--  127 (337)
T cd07852          53 TFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGN--  127 (337)
T ss_pred             hhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--
Confidence            56799999999 999999999998654  36899999996 5999988554  6889999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc---eeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT---HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                       ++|+||||+||+++.++.+||+|||++.........   .......|+..|+|||.+.+ ..++.++||||||+++|+|
T Consensus       128 -i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el  206 (337)
T cd07852         128 -VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEM  206 (337)
T ss_pred             -eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHH
Confidence             999999999999999999999999999875443221   12233568899999998764 4678999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhh--------hh--ccccccccccCC---ccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARP--------HL--GERRRFYRLIDP---RLEGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|+.||...........+.....        .+  .....+......   ..........+..+.++|.+||+.||++|
T Consensus       207 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R  286 (337)
T cd07852         207 LLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKR  286 (337)
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccc
Confidence            999999975433221111000000        00  000000000000   00000111135788999999999999999


Q ss_pred             CCHHHHHHH
Q 021891          222 PLMSEVVEA  230 (306)
Q Consensus       222 ps~~ell~~  230 (306)
                      ||+.+++++
T Consensus       287 ps~~~il~~  295 (337)
T cd07852         287 LTAEEALEH  295 (337)
T ss_pred             cCHHHHhhC
Confidence            999999985


No 335
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00  E-value=7.4e-36  Score=257.02  Aligned_cols=223  Identities=22%  Similarity=0.297  Sum_probs=162.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++|+||+++++++.+.+..++||||++ ++|.+++... ...+++..++.++.||+.||+|||+.+   +
T Consensus        48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i  123 (294)
T PLN00009         48 AIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---V  123 (294)
T ss_pred             HHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            5789999999999999999999999999999999996 5888877554 334688899999999999999999988   9


Q ss_pred             EeccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCC
Q 021891           81 IYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        81 iH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~  158 (306)
                      +|+||+|+||+++. ++.+||+|||++........  ......++..|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus       124 ~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~  201 (294)
T PLN00009        124 LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK  201 (294)
T ss_pred             eCCCCCcceEEEECCCCEEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            99999999999985 56799999999976433211  1122356889999998875 45789999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhh-h-h---hhc---ccccccccc---CCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWA-R-P---HLG---ERRRFYRLI---DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~-~-~---~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      .||......+........ . .   .+.   ....+....   ............+..+.+++.+||+.+|++||++.++
T Consensus       202 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~  281 (294)
T PLN00009        202 PLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA  281 (294)
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH
Confidence            999764332111100000 0 0   000   000000000   0000000011234678999999999999999999999


Q ss_pred             HHH
Q 021891          228 VEA  230 (306)
Q Consensus       228 l~~  230 (306)
                      +++
T Consensus       282 l~~  284 (294)
T PLN00009        282 LEH  284 (294)
T ss_pred             hcC
Confidence            984


No 336
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00  E-value=6.4e-36  Score=249.54  Aligned_cols=198  Identities=22%  Similarity=0.249  Sum_probs=158.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|...+....||||+++++++.+.+..++||||+++++|.+++.+.. .+++..+..++.|++.||.|||+.+   ++
T Consensus        32 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~---i~  107 (237)
T cd05576          32 YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREG---IV  107 (237)
T ss_pred             hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            3456666666789999999999999999999999999999999986543 5899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      ||||||+||+++.++.++++|||.+......     .....++..|+|||.+.+..++.++||||+|+++|||++|..|+
T Consensus       108 H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~  182 (237)
T cd05576         108 CRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLV  182 (237)
T ss_pred             ccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchh
Confidence            9999999999999999999999987654332     12234567899999998888999999999999999999999887


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM-----SEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~ell~~  230 (306)
                      ........            .      ...    ...+...+..+.++|.+||+.||++||++     +++++|
T Consensus       183 ~~~~~~~~------------~------~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  234 (237)
T cd05576         183 ECHPSGIN------------T------HTT----LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH  234 (237)
T ss_pred             hcCchhcc------------c------ccc----cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence            53211100            0      000    01112234678999999999999999986     666654


No 337
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00  E-value=6.3e-36  Score=256.23  Aligned_cols=224  Identities=24%  Similarity=0.285  Sum_probs=167.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|++++++++|+||+++++++...  +..++||||++ ++|.+++......+++..++.++.||+.||+|||+.+   
T Consensus        45 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---  120 (287)
T cd07840          45 AIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---  120 (287)
T ss_pred             HHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---
Confidence            56899999999999999999999988  88999999997 4999988766567999999999999999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~  158 (306)
                      ++|+||+|+||+++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++||||||+++|+|++|.
T Consensus       121 ~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~  199 (287)
T cd07840         121 ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK  199 (287)
T ss_pred             ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999876443211 1223356788999998764 46789999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhh--hcccccccc-----cc------CCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPH--LGERRRFYR-----LI------DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      .||...........+......  ......+..     ..      .......+...++..+.+++.+||..+|.+||++.
T Consensus       200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~  279 (287)
T cd07840         200 PIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD  279 (287)
T ss_pred             CCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            999765432111110000000  000000000     00      00000011111267889999999999999999999


Q ss_pred             HHHHH
Q 021891          226 EVVEA  230 (306)
Q Consensus       226 ell~~  230 (306)
                      +++++
T Consensus       280 ~~l~~  284 (287)
T cd07840         280 QALQH  284 (287)
T ss_pred             HHhhC
Confidence            99975


No 338
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00  E-value=7.8e-36  Score=255.35  Aligned_cols=207  Identities=26%  Similarity=0.396  Sum_probs=159.6

Q ss_pred             HHHHHH-HhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcC-CC
Q 021891            3 QAEVNF-LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEE-AE   77 (306)
Q Consensus         3 ~~E~~i-l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~-~~   77 (306)
                      ..|+.+ ++.++||||+++++++..++..++||||++ ++|.+++..   ....+++..++.++.||+.||.|||++ + 
T Consensus        47 ~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-  124 (283)
T cd06617          47 LMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-  124 (283)
T ss_pred             HHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-
Confidence            345554 666799999999999999999999999996 688877643   334689999999999999999999986 7 


Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc----CCCCchhHHHHHHHHHHH
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e  153 (306)
                        ++||||||+||+++.++.+||+|||++.......   ......|+..|+|||++.+    ..++.++|+|||||++|+
T Consensus       125 --i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~  199 (283)
T cd06617         125 --VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE  199 (283)
T ss_pred             --eecCCCCHHHEEECCCCCEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence              9999999999999999999999999998653321   1223457889999998864    456889999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      |++|..||......  .......   ..       ...+...   ....+.++.++|.+||..+|++||++.+++++-
T Consensus       200 l~~g~~p~~~~~~~--~~~~~~~---~~-------~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  262 (283)
T cd06617         200 LATGRFPYDSWKTP--FQQLKQV---VE-------EPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP  262 (283)
T ss_pred             HHhCCCCCCccccC--HHHHHHH---Hh-------cCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            99999998643211  0111000   00       0001110   112357899999999999999999999999853


No 339
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00  E-value=1.1e-35  Score=256.01  Aligned_cols=221  Identities=21%  Similarity=0.283  Sum_probs=162.4

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCe-----eEEEEEcCCCCCHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQ-----RLLVYEFMPRGSLENHLFRR----SLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~-----~~lv~e~~~~~sL~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      +.+|+.+++.+. |+||+++++++...+.     .|+||||+++ +|.+++...    ...+++..++.++.||+.||.|
T Consensus        47 ~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~  125 (295)
T cd07837          47 ALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAH  125 (295)
T ss_pred             HHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence            578999999995 6999999999987665     8999999975 898887543    2458999999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGV  149 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~  149 (306)
                      ||+.+   ++||||||+||+++. ++.+||+|||++.........  .....++..|+|||++.+ ..++.++||||||+
T Consensus       126 LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~  200 (295)
T cd07837         126 CHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGC  200 (295)
T ss_pred             HHHCC---eeecCCChHHEEEecCCCeEEEeecccceecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHH
Confidence            99988   999999999999998 889999999998765332111  122346788999998865 46799999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcchHHhhhhh-hccc---------cccccc--cCCccCCCCCHHHHHHHHHHHHHcccCC
Q 021891          150 VLLEMLTGRRSMDKNRPNGEHNLVEWARPH-LGER---------RRFYRL--IDPRLEGHFSIKGAQKAAQLAAHCLSRD  217 (306)
Q Consensus       150 il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~  217 (306)
                      ++|+|++|..||.........  ....... ....         ......  ..+..........+..+.++|.+||..|
T Consensus       201 ~l~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  278 (295)
T cd07837         201 IFAEMSRKQPLFPGDSELQQL--LHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYD  278 (295)
T ss_pred             HHHHHHcCCCCCCCCCHHHHH--HHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCC
Confidence            999999999999764322111  0000000 0000         000000  0000000011124577899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 021891          218 PKARPLMSEVVEA  230 (306)
Q Consensus       218 p~~Rps~~ell~~  230 (306)
                      |.+||++.|++.+
T Consensus       279 P~~R~~~~eil~~  291 (295)
T cd07837         279 PAKRISAKAALTH  291 (295)
T ss_pred             hhhcCCHHHHhcC
Confidence            9999999999985


No 340
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00  E-value=3.4e-35  Score=290.36  Aligned_cols=221  Identities=32%  Similarity=0.546  Sum_probs=173.0

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|++++++++|||||+++++|.+.+..++||||+++|+|.+++.    .+++..+..++.|++.||+|||.....+|+|
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH  806 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVV  806 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeec
Confidence            467999999999999999999999999999999999999999984    3789999999999999999999553344999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      |||||+||+++.++..++. ||.......      .....|+..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus       807 ~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~  879 (968)
T PLN00113        807 GNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD  879 (968)
T ss_pred             CCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence            9999999999998888775 665543211      112357899999999999899999999999999999999999995


Q ss_pred             CCCCCCCcchHHhhhhhhccccccccccCCccCC--CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCC
Q 021891          163 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEG--HFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPN  236 (306)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  236 (306)
                      .... .......|....... ......+++....  ........++.+++.+||+.||++|||+.|+++.|+.+..
T Consensus       880 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        880 AEFG-VHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             cccC-CCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            4322 223344444432211 1222334444322  2344556678999999999999999999999999976543


No 341
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=4.5e-36  Score=245.24  Aligned_cols=219  Identities=26%  Similarity=0.308  Sum_probs=169.4

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .+|++++.++ .|+||++++++|+++..+|||||.|.||+|..+|.++. .|++..+..+..+|+.||.|||.+|   |.
T Consensus       123 fREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kg---IA  198 (463)
T KOG0607|consen  123 FREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLHTKG---IA  198 (463)
T ss_pred             HHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcC---cc
Confidence            5899999999 69999999999999999999999999999999996654 7999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCc---EEEeccCCcccCCCC-----CcceeeecccccccccCCcchh-----cCCCCchhHHHHHH
Q 021891           82 YRDFKTSNILLDADYN---AKLSDFGLAKDGPEG-----DKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFG  148 (306)
Q Consensus        82 H~dlkp~Nill~~~~~---~kl~Dfg~a~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG  148 (306)
                      ||||||+|||....+.   +|||||.+..-....     ..+......+|+..|||||+..     ...|+.++|.||||
T Consensus       199 HRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLG  278 (463)
T KOG0607|consen  199 HRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLG  278 (463)
T ss_pred             cccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHH
Confidence            9999999999976654   699999987542211     1111223467899999999874     23689999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCC--------cchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCC
Q 021891          149 VVLLEMLTGRRSMDKNRPNGE--------HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA  220 (306)
Q Consensus       149 ~il~elltg~~pf~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  220 (306)
                      +|+|-|++|.+||.+.-..+.        ..........+.++  -+++.+..     ....+.+..+++.++|..|+.+
T Consensus       279 vIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG--kYeFPdkd-----WahIS~eakdlisnLlvrda~~  351 (463)
T KOG0607|consen  279 VILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG--KYEFPDKD-----WAHISSEAKDLISNLLVRDAKQ  351 (463)
T ss_pred             HHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc--CCcCChhh-----hHHhhHHHHHHHHHHHhccHHh
Confidence            999999999999987543221        00111111111111  11222221     2245778999999999999999


Q ss_pred             CCCHHHHHHHhC
Q 021891          221 RPLMSEVVEALK  232 (306)
Q Consensus       221 Rps~~ell~~l~  232 (306)
                      |.++.++++|.+
T Consensus       352 rlsa~~vlnhPw  363 (463)
T KOG0607|consen  352 RLSAAQVLNHPW  363 (463)
T ss_pred             hhhhhhccCCcc
Confidence            999999998654


No 342
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=100.00  E-value=1.8e-35  Score=248.81  Aligned_cols=206  Identities=29%  Similarity=0.450  Sum_probs=169.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+|++++++++.+.+..++||||+++++|.+++... ..+++..++.++.|++.||.|||+.+   ++
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~---i~  121 (254)
T cd06627          46 IMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG---VI  121 (254)
T ss_pred             HHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC---cc
Confidence            678999999999999999999999999999999999999999998655 47999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++.........  .....++..|+|||...+..++.++|||+||+++|+|++|..||
T Consensus       122 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~  199 (254)
T cd06627         122 HRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY  199 (254)
T ss_pred             cCCCCHHHEEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999876543321  23346788999999998878899999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .......    ..+.. ..   .     ..+.    ++...+..+.+++.+||..+|++|||+.+++.+
T Consensus       200 ~~~~~~~----~~~~~-~~---~-----~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         200 YDLNPMA----ALFRI-VQ---D-----DHPP----LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             CCccHHH----HHHHH-hc---c-----CCCC----CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            7543110    00100 00   0     0011    122235688999999999999999999999864


No 343
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-36  Score=243.23  Aligned_cols=200  Identities=30%  Similarity=0.439  Sum_probs=161.1

Q ss_pred             CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE
Q 021891           13 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILL   92 (306)
Q Consensus        13 ~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill   92 (306)
                      ..|.||+.+|+|..+...++.||.| +..++.++.+-.+++++..+-++...+++||.||.++..  |+|||+||+|||+
T Consensus       149 dcpyIV~c~GyFi~n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILl  225 (391)
T KOG0983|consen  149 DCPYIVQCFGYFITNTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILL  225 (391)
T ss_pred             CCCeeeeeeeEEeeCchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEE
Confidence            4699999999999999999999999 456777776667789999999999999999999987643  9999999999999


Q ss_pred             cCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 021891           93 DADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE  169 (306)
Q Consensus        93 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  169 (306)
                      |+.|.+||||||++-.+.+..   ......|.+.|||||-+.   ...|+..+||||||+.++||.||+.||.+....  
T Consensus       226 De~GniKlCDFGIsGrlvdSk---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--  300 (391)
T KOG0983|consen  226 DERGNIKLCDFGISGRLVDSK---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--  300 (391)
T ss_pred             ccCCCEEeecccccceeeccc---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--
Confidence            999999999999998765532   334567899999999986   347899999999999999999999999875321  


Q ss_pred             cchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          170 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      ......+..          -..|.+....  ..+.++.+|+..||++|+.+||...++++|-.
T Consensus       301 Fe~ltkvln----------~ePP~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F  351 (391)
T KOG0983|consen  301 FEVLTKVLN----------EEPPLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF  351 (391)
T ss_pred             HHHHHHHHh----------cCCCCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence            112211111          1112222222  14689999999999999999999999998743


No 344
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-36  Score=248.75  Aligned_cols=203  Identities=28%  Similarity=0.355  Sum_probs=169.8

Q ss_pred             HHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR   83 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~   83 (306)
                      -|-++|+..+||.+..+.-.|+..+.+|+||||+.||.|.-++.+ ...+++.....+...|+.||.|||+++   ||+|
T Consensus       217 TE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~---ivYR  292 (516)
T KOG0690|consen  217 TENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRN---IVYR  292 (516)
T ss_pred             hHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCC---eeee
Confidence            466789999999999888889999999999999999999999854 457999999999999999999999988   9999


Q ss_pred             cCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 021891           84 DFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  163 (306)
Q Consensus        84 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  163 (306)
                      |||.+|+++|.+|++||+|||+++.--..  ......+|||+.|.|||++....|+.++|.|.+|+++|||++|+.||..
T Consensus       293 DlKLENLlLDkDGHIKitDFGLCKE~I~~--g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn  370 (516)
T KOG0690|consen  293 DLKLENLLLDKDGHIKITDFGLCKEEIKY--GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN  370 (516)
T ss_pred             echhhhheeccCCceEeeecccchhcccc--cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence            99999999999999999999999863222  1234568999999999999999999999999999999999999999987


Q ss_pred             CCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 021891          164 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  230 (306)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~  230 (306)
                      ........++..      +            .-.++...++++..|+.-+|.+||++|.     .+.||.++
T Consensus       371 ~dh~kLFeLIl~------e------------d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  371 KDHEKLFELILM------E------------DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             cchhHHHHHHHh------h------------hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence            654332222211      1            0124445567899999999999999994     46666654


No 345
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00  E-value=8e-35  Score=250.65  Aligned_cols=210  Identities=17%  Similarity=0.175  Sum_probs=156.3

Q ss_pred             HHHhcCCCCcccceeeEEEeCC----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            7 NFLGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         7 ~il~~l~H~niv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      ..+..+.|+||+++++++....    ..+++++++. .++.+.+... ...++..+..++.|++.||.|||+.+   ++|
T Consensus        75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH  149 (294)
T PHA02882         75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHG---ISH  149 (294)
T ss_pred             HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence            4456679999999999876544    3478888874 4777766443 34678889999999999999999988   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-----eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                      |||||+|||++.++.++|+|||+++........     .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       150 rDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g  229 (294)
T PHA02882        150 GDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI  229 (294)
T ss_pred             CCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999865432211     112234689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ..||............  ......     .++......   ....+..+.+++..|++.+|++||++.++++.+
T Consensus       230 ~~P~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        230 KLPWKGFGHNGNLIHA--AKCDFI-----KRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             CCCCCccccchHHHHH--hHHHHH-----HHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            9999866332211110  000000     000000000   011247899999999999999999999999865


No 346
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00  E-value=2.8e-35  Score=258.06  Aligned_cols=226  Identities=23%  Similarity=0.292  Sum_probs=166.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++++..++..++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+   ++
T Consensus        67 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~---i~  141 (335)
T PTZ00024         67 TLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWY---FM  141 (335)
T ss_pred             HHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            5689999999999999999999999999999999996 5999988544 46899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCC------------cceeeecccccccccCCcchhcC-CCCchhHHHHHH
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGD------------KTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFG  148 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG  148 (306)
                      |+||+|+||+++.++.++|+|||++.......            .........++..|+|||.+.+. .++.++||||||
T Consensus       142 H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  221 (335)
T PTZ00024        142 HRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVG  221 (335)
T ss_pred             cccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHH
Confidence            99999999999999999999999987654110            00111223467889999998764 478999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcchHHhhhh-----hhcccccc--ccccCCccCC---CCCHHHHHHHHHHHHHcccCCC
Q 021891          149 VVLLEMLTGRRSMDKNRPNGEHNLVEWARP-----HLGERRRF--YRLIDPRLEG---HFSIKGAQKAAQLAAHCLSRDP  218 (306)
Q Consensus       149 ~il~elltg~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p  218 (306)
                      |++|+|++|..||...........+.....     .+.....+  ..........   ......+.++.++|.+||+.+|
T Consensus       222 ~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  301 (335)
T PTZ00024        222 CIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNP  301 (335)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCc
Confidence            999999999999976543221110000000     00000000  0000000000   0011225678899999999999


Q ss_pred             CCCCCHHHHHHHhC
Q 021891          219 KARPLMSEVVEALK  232 (306)
Q Consensus       219 ~~Rps~~ell~~l~  232 (306)
                      ++|||+.+++.+..
T Consensus       302 ~~R~s~~~~l~~~~  315 (335)
T PTZ00024        302 LERISAKEALKHEY  315 (335)
T ss_pred             hhccCHHHHhcCcc
Confidence            99999999998654


No 347
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=100.00  E-value=7.4e-36  Score=261.66  Aligned_cols=226  Identities=22%  Similarity=0.296  Sum_probs=165.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe----CCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAE   77 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~   77 (306)
                      +.+|+.+|++++||||+++++++..    ....++||||+. ++|.+++... ..+++..+..++.||+.||.|||+.+ 
T Consensus        51 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~-  127 (334)
T cd07855          51 TLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSAN-  127 (334)
T ss_pred             HHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC-
Confidence            5679999999999999999998764    346899999995 5899888554 45999999999999999999999988 


Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc--eeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                        ++||||||+||+++.++.+||+|||++.........  .......|+..|+|||.+.+ ..++.++|||||||++|+|
T Consensus       128 --ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el  205 (334)
T cd07855         128 --VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEM  205 (334)
T ss_pred             --eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHH
Confidence              999999999999999999999999998765332211  11223468889999999865 4689999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhhh-----h--ccccccccc---cCCccC---CCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARPH-----L--GERRRFYRL---IDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|..||...........+......     .  .......+.   ......   ..+....+.++.++|.+||+.+|.+|
T Consensus       206 ~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  285 (334)
T cd07855         206 LGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEER  285 (334)
T ss_pred             HcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhC
Confidence            9999999764332111000000000     0  000000000   000000   00111235789999999999999999


Q ss_pred             CCHHHHHHHhC
Q 021891          222 PLMSEVVEALK  232 (306)
Q Consensus       222 ps~~ell~~l~  232 (306)
                      ||+.+++++..
T Consensus       286 pt~~~~l~~~~  296 (334)
T cd07855         286 ITVEQALQHPF  296 (334)
T ss_pred             cCHHHHHhChh
Confidence            99999999653


No 348
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=100.00  E-value=1.8e-35  Score=256.47  Aligned_cols=224  Identities=27%  Similarity=0.317  Sum_probs=163.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC--------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD--------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~--------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      +.+|+++++.++|+||+++++++....        .+++||||+.+ +|...+......+++..+..++.|+++||.|||
T Consensus        54 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH  132 (311)
T cd07866          54 ALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH  132 (311)
T ss_pred             HHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999876543        46999999964 788777666667999999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce---------eeecccccccccCCcchhc-CCCCchhH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH---------VSTRVMGTYGYAAPEYVMT-GHLTSRSD  143 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~D  143 (306)
                      +.+   ++|+||||+||+++.++.++|+|||+++.........         ......++..|+|||.+.+ ..++.++|
T Consensus       133 ~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  209 (311)
T cd07866         133 ENH---ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD  209 (311)
T ss_pred             hCC---eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence            998   9999999999999999999999999997654322111         1122456788999998865 45899999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhh-----hhcccccccc--------ccCCccCCCCCHHHHHHHHHHH
Q 021891          144 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP-----HLGERRRFYR--------LIDPRLEGHFSIKGAQKAAQLA  210 (306)
Q Consensus       144 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~li  210 (306)
                      ||||||++|+|++|.+||.+.........+.....     .+........        ...+.....+ ......+.++|
T Consensus       210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i  288 (311)
T cd07866         210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDLL  288 (311)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHHH
Confidence            99999999999999999976543221111100000     0000000000        0000000000 11235788999


Q ss_pred             HHcccCCCCCCCCHHHHHHH
Q 021891          211 AHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       211 ~~~l~~~p~~Rps~~ell~~  230 (306)
                      .+||+.||.+|||+.+++.+
T Consensus       289 ~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         289 SKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHcccCcccCcCHHHHhcC
Confidence            99999999999999999975


No 349
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00  E-value=2.3e-35  Score=258.75  Aligned_cols=220  Identities=23%  Similarity=0.316  Sum_probs=161.9

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +.+|+.++++++|+||+++++++....     ..++|+||+. ++|.+++..  ..+++..++.++.|++.||.|||+.+
T Consensus        50 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~  126 (336)
T cd07849          50 TLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSAN  126 (336)
T ss_pred             HHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            567999999999999999999876543     5799999996 588887743  36899999999999999999999998


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcce-eeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                         ++||||||+||+++.++.+||+|||++.......... ......|+..|+|||.+.+ ..++.++|||||||++|+|
T Consensus       127 ---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el  203 (336)
T cd07849         127 ---VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEM  203 (336)
T ss_pred             ---eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence               9999999999999999999999999987654322111 1123467899999998754 5689999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhhhhcc-------------ccccccccCCccCCC---CCHHHHHHHHHHHHHcccCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARPHLGE-------------RRRFYRLIDPRLEGH---FSIKGAQKAAQLAAHCLSRDP  218 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p  218 (306)
                      ++|+.||........   ..........             ...............   .....+..+.+++.+||+.+|
T Consensus       204 ~~G~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  280 (336)
T cd07849         204 LSNRPLFPGKDYLHQ---LNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNP  280 (336)
T ss_pred             HhCCCCCCCCCHHHH---HHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCCh
Confidence            999999965432110   0000000000             000000000000000   001224678999999999999


Q ss_pred             CCCCCHHHHHHH
Q 021891          219 KARPLMSEVVEA  230 (306)
Q Consensus       219 ~~Rps~~ell~~  230 (306)
                      ++|||+.+++++
T Consensus       281 ~~Rpt~~e~l~h  292 (336)
T cd07849         281 HKRITVEEALAH  292 (336)
T ss_pred             hhCcCHHHHhcC
Confidence            999999999997


No 350
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-36  Score=261.88  Aligned_cols=206  Identities=24%  Similarity=0.309  Sum_probs=176.9

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      -.|-+||.++..|.||++|--|.+++..|++||-|-||.|...+..++ .|++.+...++..+++|++|||+++   ||+
T Consensus       468 ~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k~---iIY  543 (732)
T KOG0614|consen  468 FSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRKG---IIY  543 (732)
T ss_pred             HhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhcC---cee
Confidence            357889999999999999999999999999999999999999996665 7999999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      |||||+|++++.+|-+||.|||.|+....+.++.   .++||+.|.|||++....-+.++|.||||+++|||++|.+||.
T Consensus       544 RDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTw---TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs  620 (732)
T KOG0614|consen  544 RDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTW---TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS  620 (732)
T ss_pred             ccCChhheeeccCCceEEeehhhHHHhccCCcee---eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence            9999999999999999999999999987665543   5799999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHHh
Q 021891          163 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL-----MSEVVEAL  231 (306)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~l  231 (306)
                      +.++....+.+.....                ...++........+||++++..+|.+|..     +.+|.+|-
T Consensus       621 ~~dpmktYn~ILkGid----------------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~  678 (732)
T KOG0614|consen  621 GVDPMKTYNLILKGID----------------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR  678 (732)
T ss_pred             CCchHHHHHHHHhhhh----------------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence            8876544333321111                12344555678899999999999999974     55555543


No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=5.4e-35  Score=251.19  Aligned_cols=210  Identities=28%  Similarity=0.358  Sum_probs=165.1

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++++ +|+||+++++++..+...++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   +
T Consensus        51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---i  126 (290)
T cd05613          51 TRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG---I  126 (290)
T ss_pred             HHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            56799999999 6999999999999999999999999999999998655 36889999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC--CCCchhHHHHHHHHHHHHHhCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~  158 (306)
                      +||||+|+||+++.++.+||+|||++......... ......|+..|+|||.+.+.  .++.++||||||+++|+|++|.
T Consensus       127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~  205 (290)
T cd05613         127 IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGA  205 (290)
T ss_pred             eccCCCHHHeEECCCCCEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999765432211 12235688899999998753  4678999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP-----LMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~ell~~  230 (306)
                      .||........  ...........        .+.    ++...+..+.+++.+||+.||++||     ++.+++++
T Consensus       206 ~p~~~~~~~~~--~~~~~~~~~~~--------~~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         206 SPFTVDGEKNS--QAEISRRILKS--------EPP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             CCCCcCCcccc--HHHHHHHhhcc--------CCC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            99864322211  11111111000        011    1222356788999999999999997     77777764


No 352
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00  E-value=1.4e-35  Score=253.24  Aligned_cols=207  Identities=27%  Similarity=0.352  Sum_probs=169.5

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|+++++++. |+||+++++++..++..++||||+.+++|.+++.+.. .+++..++.++.|++.||.|||+.+   +
T Consensus        48 ~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~---~  123 (280)
T cd05581          48 VKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKG---I  123 (280)
T ss_pred             HHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            578899999998 9999999999999999999999999999999996654 7999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc------------------eeeecccccccccCCcchhcCCCCchh
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT------------------HVSTRVMGTYGYAAPEYVMTGHLTSRS  142 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~  142 (306)
                      +|+||+|+||+++.++.++|+|||++.........                  .......++..|+|||+..+..++.++
T Consensus       124 ~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  203 (280)
T cd05581         124 IHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSS  203 (280)
T ss_pred             eecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhh
Confidence            99999999999999999999999998865433211                  122334578899999999888899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          143 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       143 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      ||||||++++++++|..||........   ....   ..            ....++...++.+.+++.+||+.+|.+||
T Consensus       204 Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~---~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~  265 (280)
T cd05581         204 DLWALGCIIYQMLTGKPPFRGSNEYLT---FQKI---LK------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRL  265 (280)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCccHHHH---HHHH---Hh------------cCCCCCCccCHHHHHHHHHHhcCCHhhCC
Confidence            999999999999999999976542110   0000   00            00111222357889999999999999999


Q ss_pred             CH----HHHHHH
Q 021891          223 LM----SEVVEA  230 (306)
Q Consensus       223 s~----~ell~~  230 (306)
                      |+    +++++|
T Consensus       266 ~~~~~~~~ll~~  277 (280)
T cd05581         266 GVNEGYDELKAH  277 (280)
T ss_pred             CcccCHHHHhcC
Confidence            99    888875


No 353
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00  E-value=3.2e-35  Score=253.91  Aligned_cols=223  Identities=26%  Similarity=0.316  Sum_probs=164.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC----------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD----------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~----------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~   71 (306)
                      +.+|++++++++||||+++++++.+..          .+++|+||+++ +|.+.+......+++..+..++.|++.||.|
T Consensus        53 ~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~  131 (302)
T cd07864          53 AIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNY  131 (302)
T ss_pred             HHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            568999999999999999999987655          78999999975 7878776665679999999999999999999


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHH
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVV  150 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  150 (306)
                      ||+.+   ++|+||||+||+++.++.+||+|||++......... ......++..|+|||++.+ ..++.++|||||||+
T Consensus       132 LH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~  207 (302)
T cd07864         132 CHKKN---FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI  207 (302)
T ss_pred             HHhCC---eecCCCCHHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence            99988   999999999999999999999999999875443221 1122345778999998864 457899999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcchHHhhhhhh--ccccccccc-----cC------CccCCCCCHHHHHHHHHHHHHcccCC
Q 021891          151 LLEMLTGRRSMDKNRPNGEHNLVEWARPHL--GERRRFYRL-----ID------PRLEGHFSIKGAQKAAQLAAHCLSRD  217 (306)
Q Consensus       151 l~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~li~~~l~~~  217 (306)
                      +++|++|++||...........+.......  .....+...     .+      ......+. ..+..+.+++.+||+.|
T Consensus       208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~  286 (302)
T cd07864         208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFS-FIPTPALDLLDHMLTLD  286 (302)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcC-CCCHHHHHHHHHHccCC
Confidence            999999999997543321111111000000  000000000     00      00000011 13568899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 021891          218 PKARPLMSEVVEA  230 (306)
Q Consensus       218 p~~Rps~~ell~~  230 (306)
                      |.+|||+.+++.+
T Consensus       287 P~~Rp~~~~il~~  299 (302)
T cd07864         287 PSKRCTAEEALNS  299 (302)
T ss_pred             hhhCCCHHHHhcC
Confidence            9999999999975


No 354
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00  E-value=2.7e-35  Score=248.96  Aligned_cols=206  Identities=22%  Similarity=0.313  Sum_probs=166.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +.+|+++++.++||||+++++++.+.+..++||||+++++|.+++..   ....+++..++.++.|++.||.|||+.+  
T Consensus        49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--  126 (260)
T cd08222          49 ANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--  126 (260)
T ss_pred             HHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--
Confidence            45788999999999999999999999999999999999999998853   3456899999999999999999999988  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  158 (306)
                       ++|+||+|+||+++. +.++|+|||++........  ......|+..|+|||.+.+..++.++|+||||+++|+|++|.
T Consensus       127 -i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~  202 (260)
T cd08222         127 -ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLA  202 (260)
T ss_pred             -ccccCCChhheEeec-CCEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence             999999999999975 5799999999876543221  223355788999999998888899999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||.....      ........       ....+    ..+...+.++.++|.+||+.+|++||++.+++++
T Consensus       203 ~~~~~~~~------~~~~~~~~-------~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         203 HAFEGQNF------LSVVLRIV-------EGPTP----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             CCCCCccH------HHHHHHHH-------cCCCC----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            99864321      11111000       00011    1233456789999999999999999999999986


No 355
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=6.4e-36  Score=226.05  Aligned_cols=222  Identities=23%  Similarity=0.271  Sum_probs=173.1

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|+-+|+.|+|.|||+++++...++.+-+|+||| ..+|+.+...-+..++.+.+..++.|++.||.|+|+++   +.|
T Consensus        49 lreicllkelkhknivrl~dvlhsdkkltlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlh  124 (292)
T KOG0662|consen   49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLH  124 (292)
T ss_pred             HHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhh
Confidence            58999999999999999999999999999999999 56999999877788999999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHh-CCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT-GRRS  160 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ellt-g~~p  160 (306)
                      |||||.|++|+.+|.+|++|||+++.+.-..  .+....+-|.+|++|.++.+. -|+...|+||.|||+.|+.. |.+.
T Consensus       125 rdlkpqnllin~ngelkladfglarafgipv--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl  202 (292)
T KOG0662|consen  125 RDLKPQNLLINRNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_pred             ccCCcceEEeccCCcEEecccchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence            9999999999999999999999999865432  233445669999999999875 58999999999999999987 6666


Q ss_pred             CCCCCCCCCcchHHhhhhhh--ccccccccccCCccCCCC---------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHL--GERRRFYRLIDPRLEGHF---------SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      |.+.+..+....+-+.....  .++..+..+.|-.....+         -......-++|+.++|.-+|..|.++++.++
T Consensus       203 fpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  203 FPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            77665544433332222111  111122222221111111         1122345579999999999999999999998


Q ss_pred             H
Q 021891          230 A  230 (306)
Q Consensus       230 ~  230 (306)
                      +
T Consensus       283 h  283 (292)
T KOG0662|consen  283 H  283 (292)
T ss_pred             C
Confidence            5


No 356
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00  E-value=1.3e-35  Score=259.68  Aligned_cols=225  Identities=24%  Similarity=0.308  Sum_probs=168.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      |.+|++++++++|+||+++++++...+     ..|+||||++ ++|.+++.+.. .+++..++.++.|++.||.|||+.+
T Consensus        46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~g  123 (330)
T cd07834          46 ILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSAN  123 (330)
T ss_pred             HHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999998775     7899999997 58998886544 7999999999999999999999998


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el  154 (306)
                         ++|+||||+||+++.++.++|+|||++......... .......++..|+|||++.+. .++.++||||||+++|+|
T Consensus       124 ---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l  200 (330)
T cd07834         124 ---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAEL  200 (330)
T ss_pred             ---eecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHH
Confidence               999999999999999999999999999876543210 112334578899999999877 889999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhhhhc-------ccccccccc---CCcc---CCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARPHLG-------ERRRFYRLI---DPRL---EGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|..||...........+........       ........+   ....   ........+..+.++|.+||+.+|++|
T Consensus       201 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  280 (330)
T cd07834         201 LTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKR  280 (330)
T ss_pred             HcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhC
Confidence            999999976543211111000000000       000000000   0000   000111235688999999999999999


Q ss_pred             CCHHHHHHHh
Q 021891          222 PLMSEVVEAL  231 (306)
Q Consensus       222 ps~~ell~~l  231 (306)
                      ||+.+++++.
T Consensus       281 pt~~~ll~~~  290 (330)
T cd07834         281 ITADEALAHP  290 (330)
T ss_pred             CCHHHHHhCc
Confidence            9999999863


No 357
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=100.00  E-value=4.1e-35  Score=246.27  Aligned_cols=205  Identities=31%  Similarity=0.390  Sum_probs=167.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++++++|+||+++++.+..++..++||||+++++|.+++.... .+++..++.++.|++.||.|||+.+   ++
T Consensus        40 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~---~~  115 (250)
T cd05123          40 TLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG---II  115 (250)
T ss_pred             HHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC---ce
Confidence            5789999999999999999999999999999999999999999986553 6899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+..++.++|+||||+++|+|++|..||
T Consensus       116 H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~  193 (250)
T cd05123         116 YRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPF  193 (250)
T ss_pred             ecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999987754321  1223456788999999998888899999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH---HHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM---SEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---~ell~~  230 (306)
                      ......   .......   ..        ..    .++...+..+.+++.+||..||++||++   ++++++
T Consensus       194 ~~~~~~---~~~~~~~---~~--------~~----~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~  247 (250)
T cd05123         194 YAEDRK---EIYEKIL---KD--------PL----RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH  247 (250)
T ss_pred             CCCCHH---HHHHHHh---cC--------CC----CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence            654321   1111000   00        00    1122225788999999999999999999   666654


No 358
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00  E-value=6.8e-35  Score=250.30  Aligned_cols=212  Identities=28%  Similarity=0.353  Sum_probs=166.3

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++.++ +|+||+++++.+..++..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+   +
T Consensus        51 ~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---~  126 (288)
T cd05583          51 TRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG---I  126 (288)
T ss_pred             HHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC---e
Confidence            56899999999 6999999999999999999999999999999998654 46899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC--CCchhHHHHHHHHHHHHHhCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~elltg~  158 (306)
                      +|+||||+||+++.++.++|+|||+++....... .......|+..|+|||.+.+..  .+.++||||||+++|+|++|.
T Consensus       127 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~  205 (288)
T cd05583         127 IYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA  205 (288)
T ss_pred             eccCCCHHHeEECCCCCEEEEECccccccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC
Confidence            9999999999999999999999999876543321 1122346788999999987654  788999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      .||........  ...........        .+.    .+...+..+.+++.+||+.||++|||+.++.+.|+
T Consensus       206 ~p~~~~~~~~~--~~~~~~~~~~~--------~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         206 SPFTVDGEQNS--QSEISRRILKS--------KPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             CCcccCcccch--HHHHHHHHHcc--------CCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            99964322111  11111111100        011    11223467889999999999999999777766544


No 359
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00  E-value=6.7e-35  Score=255.89  Aligned_cols=221  Identities=24%  Similarity=0.334  Sum_probs=163.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC-----CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED-----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +.+|+.+++.++|+||+++++++...     ...++|+||+. ++|.+++... ..+++..+..++.|++.||.|||+.+
T Consensus        51 ~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~  128 (337)
T cd07858          51 TLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN  128 (337)
T ss_pred             HHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45799999999999999999988654     35799999995 6898888654 47999999999999999999999988


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell  155 (306)
                         ++||||||+||+++.++.+||+|||++.......  .......++..|+|||.+.. ..++.++|||||||++|+|+
T Consensus       129 ---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  203 (337)
T cd07858         129 ---VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL  203 (337)
T ss_pred             ---EecCCCCHHHEEEcCCCCEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence               9999999999999999999999999998754322  11233457889999998864 46899999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhh--------hh--cccccccc----ccCCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARP--------HL--GERRRFYR----LIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      +|..||...........+.....        ..  ........    ...+... ......+..+.++|.+||+.+|++|
T Consensus       204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R  282 (337)
T cd07858         204 GRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKR  282 (337)
T ss_pred             cCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhc
Confidence            99999975432110000000000        00  00000000    0000000 0111245778999999999999999


Q ss_pred             CCHHHHHHH
Q 021891          222 PLMSEVVEA  230 (306)
Q Consensus       222 ps~~ell~~  230 (306)
                      ||++++++|
T Consensus       283 ps~~ell~h  291 (337)
T cd07858         283 ITVEEALAH  291 (337)
T ss_pred             cCHHHHHcC
Confidence            999999997


No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=100.00  E-value=3.1e-35  Score=251.38  Aligned_cols=222  Identities=26%  Similarity=0.355  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++.+.+..++||||++ ++|.+++.+....+++..+..++.|++.||.|||+.+   ++
T Consensus        45 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~  120 (282)
T cd07829          45 ALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---IL  120 (282)
T ss_pred             HHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            5679999999999999999999999999999999997 5999999776557999999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+|+||+++.++.++|+|||++........  ......++..|+|||.+.+. .++.++|||||||+++||++|..|
T Consensus       121 H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~  198 (282)
T cd07829         121 HRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPL  198 (282)
T ss_pred             cCCCChheEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876543222  12223457789999998766 789999999999999999999999


Q ss_pred             CCCCCCCCCcchHHhh--------hhhhccc----cccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          161 MDKNRPNGEHNLVEWA--------RPHLGER----RRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      |...........+...        .......    ..+...........+ ...+..+.++|.+||..||++||++.+++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l  277 (282)
T cd07829         199 FPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEAL  277 (282)
T ss_pred             CCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence            9764422111100000        0000000    000000000000001 11256899999999999999999999999


Q ss_pred             HH
Q 021891          229 EA  230 (306)
Q Consensus       229 ~~  230 (306)
                      .+
T Consensus       278 ~~  279 (282)
T cd07829         278 KH  279 (282)
T ss_pred             hC
Confidence            85


No 361
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00  E-value=1.3e-34  Score=248.22  Aligned_cols=221  Identities=24%  Similarity=0.300  Sum_probs=164.9

Q ss_pred             HHHHHHHHhcC---CCCcccceeeEEEeCCe-----eEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDL---VHLNLVKLIGYCIEDDQ-----RLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l---~H~niv~~~~~~~~~~~-----~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      +.+|+.+++++   +|+||+++++++...+.     .+++|||+. ++|.+++.... ..+++..++.++.|++.||.||
T Consensus        45 ~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L  123 (287)
T cd07838          45 TLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL  123 (287)
T ss_pred             HHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45687777666   69999999999998776     899999996 48998886543 3689999999999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           73 HEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                      |+.+   ++|+||+|+||+++.++.+||+|||++........   .....++..|+|||.+.+..++.++|||||||++|
T Consensus       124 H~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~  197 (287)
T cd07838         124 HSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFA  197 (287)
T ss_pred             HHCC---eeeccCChhhEEEccCCCEEEeccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHH
Confidence            9988   99999999999999999999999999977543321   12234688899999999888999999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCcchHHhhhh-----hhcc-----ccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          153 EMLTGRRSMDKNRPNGEHNLVEWARP-----HLGE-----RRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       153 elltg~~pf~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      +|++|.+||......+....+.....     .+..     ...+...... .........+..+.++|.+||+.||.+||
T Consensus       198 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  276 (287)
T cd07838         198 ELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR-SFKSFVPEICEEGLDLLKKMLTFNPHKRI  276 (287)
T ss_pred             HHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccccccc-chhhhhhhhhHHHHHHHHHHhccCCccCC
Confidence            99999999876443221110000000     0000     0000000000 00111223457889999999999999999


Q ss_pred             CHHHHHHH
Q 021891          223 LMSEVVEA  230 (306)
Q Consensus       223 s~~ell~~  230 (306)
                      ++.+++++
T Consensus       277 ~~~~il~~  284 (287)
T cd07838         277 SAFEALQH  284 (287)
T ss_pred             CHHHHhcC
Confidence            99999975


No 362
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00  E-value=5e-35  Score=261.12  Aligned_cols=223  Identities=26%  Similarity=0.311  Sum_probs=168.6

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~--~~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      -+|+++|++|+|+|||+++|+-++..      ...+|||||.||||...+.+  +...+++..+..++.++..||.|||+
T Consensus        59 ~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE  138 (732)
T KOG4250|consen   59 CREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE  138 (732)
T ss_pred             HHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47999999999999999999765443      45799999999999999965  35679999999999999999999999


Q ss_pred             CCCCCeEeccCCCCCeEEc--CCCc--EEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHH
Q 021891           75 EAERPVIYRDFKTSNILLD--ADYN--AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGV  149 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~--~~~~--~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~  149 (306)
                      ++   |+||||||.||++-  .+|+  -||+|||.|+...++.   ....++||..|.+||++. .+.|+..+|.|||||
T Consensus       139 n~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gv  212 (732)
T KOG4250|consen  139 NG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGV  212 (732)
T ss_pred             cC---ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhh
Confidence            88   99999999999993  3343  5999999999887654   456789999999999998 488999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccc-----------cccccccCCccCCCCCHHHHHHHHHHHHHcccCCC
Q 021891          150 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER-----------RRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP  218 (306)
Q Consensus       150 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (306)
                      ++|+.+||..||...........+.|....-...           ..+..-..-.............+-.++..+|..+|
T Consensus       213 tlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~  292 (732)
T KOG4250|consen  213 TLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNP  292 (732)
T ss_pred             HHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhH
Confidence            9999999999997543332212222222111000           00000000111233445556677788999999999


Q ss_pred             CCCC--CHHHHHHHh
Q 021891          219 KARP--LMSEVVEAL  231 (306)
Q Consensus       219 ~~Rp--s~~ell~~l  231 (306)
                      .+|.  .+.+..+.+
T Consensus       293 ~~~~~~~~~~~Fa~~  307 (732)
T KOG4250|consen  293 RKRGHEGFDRFFAEV  307 (732)
T ss_pred             HHhCCCCcchHHHHH
Confidence            9998  655555544


No 363
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00  E-value=1.2e-34  Score=253.76  Aligned_cols=225  Identities=24%  Similarity=0.299  Sum_probs=161.7

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeC----CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +.+|+++++++ +||||+++++++...    ...++++||+. ++|.+.+... ..+++..++.++.||+.||.|||+.+
T Consensus        48 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g  125 (332)
T cd07857          48 ALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSAN  125 (332)
T ss_pred             HHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            46799999999 599999999975432    45789999995 6899888543 47899999999999999999999998


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc--eeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~e  153 (306)
                         ++||||||+||+++.++.+||+|||+++........  .......|+..|+|||.+.+ ..++.++|||||||++|+
T Consensus       126 ---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~  202 (332)
T cd07857         126 ---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAE  202 (332)
T ss_pred             ---cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHH
Confidence               999999999999999999999999999865432211  11223568899999998765 468999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhh--------hhhcc--cccccccc---CCccCCCCCHHHHHHHHHHHHHcccCCCCC
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWAR--------PHLGE--RRRFYRLI---DPRLEGHFSIKGAQKAAQLAAHCLSRDPKA  220 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  220 (306)
                      |++|.+||...........+....        .....  ...+....   ............+..+.+|+.+||+.||.+
T Consensus       203 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  282 (332)
T cd07857         203 LLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTK  282 (332)
T ss_pred             HHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCccc
Confidence            999999997643211110000000        00000  00000000   000000000112467899999999999999


Q ss_pred             CCCHHHHHHHh
Q 021891          221 RPLMSEVVEAL  231 (306)
Q Consensus       221 Rps~~ell~~l  231 (306)
                      |||+.+++++-
T Consensus       283 R~t~~~ll~~~  293 (332)
T cd07857         283 RISVEEALEHP  293 (332)
T ss_pred             CCCHHHHhcCh
Confidence            99999998753


No 364
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00  E-value=6.5e-35  Score=251.43  Aligned_cols=210  Identities=30%  Similarity=0.432  Sum_probs=161.1

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCC
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~   79 (306)
                      +.+|+.++..+ .|+||+++++++.+....++||||+. ++|.+++......+++..+..++.|++.||.|||+ .+   
T Consensus        60 ~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---  135 (296)
T cd06618          60 ILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG---  135 (296)
T ss_pred             HHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---
Confidence            34567666666 59999999999999999999999995 58888776655579999999999999999999997 46   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCC----CCchhHHHHHHHHHHHHH
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH----LTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~ell  155 (306)
                      ++||||+|+||+++.++.+||+|||++........   .....++..|+|||.+.+..    ++.++||||||+++|+|+
T Consensus       136 i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~  212 (296)
T cd06618         136 VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA  212 (296)
T ss_pred             EecCCCcHHHEEEcCCCCEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH
Confidence            99999999999999999999999999876543221   12235678899999987543    788999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      +|+.||......  .......   ....       .+....  ....+..+.+|+.+||..||.+||++.+++++..
T Consensus       213 ~g~~p~~~~~~~--~~~~~~~---~~~~-------~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~  275 (296)
T cd06618         213 TGQFPYKNCKTE--FEVLTKI---LQEE-------PPSLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF  275 (296)
T ss_pred             hCCCCCCcchhH--HHHHHHH---hcCC-------CCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence            999999653211  0111100   0000       000000  0123467899999999999999999999998743


No 365
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00  E-value=1.6e-34  Score=247.30  Aligned_cols=220  Identities=26%  Similarity=0.355  Sum_probs=165.4

Q ss_pred             HHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .+|+..+++++ |+||+++++++.+++..++||||+ +++|.+++.... ..+++..+..++.|++.+|.|||+.+   +
T Consensus        45 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i  120 (283)
T cd07830          45 LREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---F  120 (283)
T ss_pred             HHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---c
Confidence            46889999998 999999999999999999999999 779999886653 57899999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh-cCCCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~  159 (306)
                      +|+||+|+||+++.++.++|+|||++........   .....++..|+|||++. ...++.++|+||||+++++|++|..
T Consensus       121 ~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~  197 (283)
T cd07830         121 FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRP  197 (283)
T ss_pred             ccCCCChhhEEEcCCCCEEEeecccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCC
Confidence            9999999999999999999999999976543221   12345788899999875 4567899999999999999999999


Q ss_pred             CCCCCCCCCCcchHH----------hhhhhhccccccccccCCcc---CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          160 SMDKNRPNGEHNLVE----------WARPHLGERRRFYRLIDPRL---EGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       160 pf~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ||.............          |..... ........+....   ........+..+.++|.+||+.+|++|||+.|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~e  276 (283)
T cd07830         198 LFPGSSEIDQLYKICSVLGTPTKQDWPEGYK-LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQ  276 (283)
T ss_pred             ccCCCChHHHHHHHHHhcCCCChhhhhhHhh-hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHH
Confidence            997654322111000          000000 0000000000000   00000111467999999999999999999999


Q ss_pred             HHHH
Q 021891          227 VVEA  230 (306)
Q Consensus       227 ll~~  230 (306)
                      ++.+
T Consensus       277 i~~~  280 (283)
T cd07830         277 ALQH  280 (283)
T ss_pred             HhhC
Confidence            9875


No 366
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-34  Score=270.39  Aligned_cols=213  Identities=30%  Similarity=0.477  Sum_probs=172.7

Q ss_pred             CHHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHH
Q 021891            1 MWQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------------LPLPWSIRMKIALG   64 (306)
Q Consensus         1 ~~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------~~l~~~~~~~~~~q   64 (306)
                      +|..|+++|+.+ +|+||+.++|+|...+..++|+|||..|+|.+++.++.               ..+.......++.|
T Consensus       347 ~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~Q  426 (609)
T KOG0200|consen  347 DLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQ  426 (609)
T ss_pred             HHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHH
Confidence            368899999999 79999999999999999999999999999999997665               34888999999999


Q ss_pred             HHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccc--cccccCCcchhcCCCCchh
Q 021891           65 AAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMG--TYGYAAPEYVMTGHLTSRS  142 (306)
Q Consensus        65 i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~  142 (306)
                      |+.|++||++..   ++||||...|||+..+..+||+|||+++........... ...|  ...|||||.+....|+.++
T Consensus       427 Ia~GMe~L~~~~---~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~-~~~~~LP~kWmApEsl~~~~ft~kS  502 (609)
T KOG0200|consen  427 IANGMEYLASVP---CVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTK-SSAGTLPVKWMAPESLFDRVFTSKS  502 (609)
T ss_pred             HHHHHHHHhhCC---ccchhhhhhhEEecCCCEEEEccccceeccCCCCceEec-CCCCccceeecCHHHhccCcccccc
Confidence            999999999988   999999999999999999999999999975544333212 1122  3459999999999999999


Q ss_pred             HHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          143 DVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       143 DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ||||||+++|||+| |..||.+.....  .+.+    .+..+.   +       -..+..++.+++++++.||+.+|++|
T Consensus       503 DVWSfGI~L~EifsLG~~PYp~~~~~~--~l~~----~l~~G~---r-------~~~P~~c~~eiY~iM~~CW~~~p~~R  566 (609)
T KOG0200|consen  503 DVWSFGILLWEIFTLGGTPYPGIPPTE--ELLE----FLKEGN---R-------MEQPEHCSDEIYDLMKSCWNADPEDR  566 (609)
T ss_pred             hhhHHHHHHHHHhhCCCCCCCCCCcHH--HHHH----HHhcCC---C-------CCCCCCCCHHHHHHHHHHhCCCcccC
Confidence            99999999999998 778887632111  1111    111111   1       12233446789999999999999999


Q ss_pred             CCHHHHHHHhCC
Q 021891          222 PLMSEVVEALKP  233 (306)
Q Consensus       222 ps~~ell~~l~~  233 (306)
                      |++.++.+.+..
T Consensus       567 P~F~~~~~~~~~  578 (609)
T KOG0200|consen  567 PTFSECVEFFEK  578 (609)
T ss_pred             CCHHHHHHHHHH
Confidence            999999998876


No 367
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-34  Score=263.93  Aligned_cols=211  Identities=28%  Similarity=0.348  Sum_probs=174.7

Q ss_pred             CHHHHHHHHhcC-CCCcccceeeEEEe-----CCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            1 MWQAEVNFLGDL-VHLNLVKLIGYCIE-----DDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         1 ~~~~E~~il~~l-~H~niv~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      |.+.|++||+.+ .|||++.+|++|..     ++.+|||||||.|||..|++..- +..+.|+.+..|++.++.||.+||
T Consensus        61 EiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH  140 (953)
T KOG0587|consen   61 EIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH  140 (953)
T ss_pred             HHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence            356788899988 79999999999875     45899999999999999998643 567999999999999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-----CCCchhHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-----HLTSRSDVYSFG  148 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG  148 (306)
                      ...   ++|||||-.|||++.++.|||+|||++...+..  ....+...||+.|||||++...     .|+..+|+||||
T Consensus       141 ~nk---viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG  215 (953)
T KOG0587|consen  141 NNK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG  215 (953)
T ss_pred             hcc---eeeecccCceEEEeccCcEEEeeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhcc
Confidence            988   999999999999999999999999999876532  3345567899999999999743     477899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 021891          149 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV  228 (306)
Q Consensus       149 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  228 (306)
                      ++..||.-|.+|+....+.-..-.               ..-+|...-.-+...++++.++|..||.+|..+||++.+++
T Consensus       216 ITaIEladG~PPl~DmHPmraLF~---------------IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll  280 (953)
T KOG0587|consen  216 ITAIEMAEGAPPLCDMHPMRALFL---------------IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELL  280 (953)
T ss_pred             ceeehhcCCCCCccCcchhhhhcc---------------CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhc
Confidence            999999999999987655322111               11122222233566789999999999999999999999999


Q ss_pred             HHh
Q 021891          229 EAL  231 (306)
Q Consensus       229 ~~l  231 (306)
                      +|.
T Consensus       281 ~hp  283 (953)
T KOG0587|consen  281 KHP  283 (953)
T ss_pred             cCC
Confidence            864


No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00  E-value=1.3e-34  Score=254.59  Aligned_cols=217  Identities=24%  Similarity=0.345  Sum_probs=159.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+++++.++|+||+++++++....      ..++|+||+. .+|...+   +..+++..+..++.|++.||+|||+.
T Consensus        61 ~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~  136 (342)
T cd07879          61 AYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSA  136 (342)
T ss_pred             HHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            568999999999999999999987543      4689999995 4777765   23589999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                      +   ++||||||+||+++.++.+||+|||+++.....     .....++..|+|||++.+ ..++.++|||||||++|||
T Consensus       137 ~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el  208 (342)
T cd07879         137 G---IIHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEM  208 (342)
T ss_pred             C---cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHH
Confidence            8   999999999999999999999999998764322     123456888999999875 4689999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhh--------hhhcc--ccccccccCCccCCCC---CHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWAR--------PHLGE--RRRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|+.||...........+....        .....  ...............+   ....+..+.+||.+||+.||++|
T Consensus       209 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  288 (342)
T cd07879         209 LTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKR  288 (342)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhC
Confidence            99999997643211110000000        00000  0000000000000000   01134578899999999999999


Q ss_pred             CCHHHHHHH
Q 021891          222 PLMSEVVEA  230 (306)
Q Consensus       222 ps~~ell~~  230 (306)
                      |++.+++.|
T Consensus       289 ~~~~e~l~h  297 (342)
T cd07879         289 LTATEALEH  297 (342)
T ss_pred             cCHHHHhcC
Confidence            999999986


No 369
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-35  Score=247.39  Aligned_cols=220  Identities=21%  Similarity=0.260  Sum_probs=166.5

Q ss_pred             HHHHHHHhcCCC--C----cccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            3 QAEVNFLGDLVH--L----NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         3 ~~E~~il~~l~H--~----niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +-|+++|+++.+  |    -+|++.++|.-.++.|||+|.+ |-|+.+++.++ ..+++...+..++.|++++++|||+.
T Consensus       133 ~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~  211 (415)
T KOG0671|consen  133 LIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL  211 (415)
T ss_pred             HHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc
Confidence            358899999933  3    3788889999999999999999 56999999775 46799999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcC--------------------CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc
Q 021891           76 AERPVIYRDFKTSNILLDA--------------------DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT  135 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~--------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  135 (306)
                      +   ++|-||||+|||+-+                    +..++|+|||.|+......     ...+.|..|+|||++.+
T Consensus       212 k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLg  283 (415)
T KOG0671|consen  212 K---LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILG  283 (415)
T ss_pred             c---eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheec
Confidence            8   999999999999931                    2348999999998744332     34567899999999999


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccc------------------------cccccccC
Q 021891          136 GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGER------------------------RRFYRLID  191 (306)
Q Consensus       136 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~  191 (306)
                      -+++..+||||+||||+|+.||...|+.....+....++.........                        +......+
T Consensus       284 LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~  363 (415)
T KOG0671|consen  284 LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFE  363 (415)
T ss_pred             cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhc
Confidence            999999999999999999999999998765443322222221111000                        00000000


Q ss_pred             CccC----CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          192 PRLE----GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       192 ~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +...    -.....+..++++|+++||..||.+|+|+.|++.|.
T Consensus       364 ~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~Hp  407 (415)
T KOG0671|consen  364 PCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHP  407 (415)
T ss_pred             CCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCH
Confidence            0000    011223456899999999999999999999999863


No 370
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00  E-value=5.8e-35  Score=256.87  Aligned_cols=219  Identities=24%  Similarity=0.316  Sum_probs=163.3

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCe------eEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQ------RLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~------~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+.++++++|+||+++++++...+.      .++|+||+ +++|.+++..  ..+++..++.++.|++.||.|||+.
T Consensus        61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~  137 (343)
T cd07851          61 TYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSA  137 (343)
T ss_pred             HHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4579999999999999999998876654      89999999 6799998854  3689999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                      +   ++|+||||+||+++.++.++|+|||++......     .....++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus       138 g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~el  209 (343)
T cd07851         138 G---IIHRDLKPSNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL  209 (343)
T ss_pred             C---eecCCCCHHHeEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHH
Confidence            8   999999999999999999999999999875432     223457888999999865 4678999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhh----hh------ccccccccccCCccCCCC---CHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARP----HL------GERRRFYRLIDPRLEGHF---SIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|..||...........+.....    .+      .....+...+.......+   ....+..+.++|.+||+.||++|
T Consensus       210 ltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~R  289 (343)
T cd07851         210 LTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKR  289 (343)
T ss_pred             HhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhC
Confidence            999999975433211110000000    00      000000000000000000   01125789999999999999999


Q ss_pred             CCHHHHHHHh
Q 021891          222 PLMSEVVEAL  231 (306)
Q Consensus       222 ps~~ell~~l  231 (306)
                      ||+.+|+++-
T Consensus       290 pt~~ell~h~  299 (343)
T cd07851         290 ITAAEALAHP  299 (343)
T ss_pred             CCHHHHhcCC
Confidence            9999999864


No 371
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00  E-value=1.9e-34  Score=253.51  Aligned_cols=224  Identities=22%  Similarity=0.292  Sum_probs=159.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--------------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--------------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK   67 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--------------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~   67 (306)
                      +.+|++++++++||||+++++++...              ...++||||++ ++|.+++...  .+++..++.++.||+.
T Consensus        49 ~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~  125 (342)
T cd07854          49 ALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLR  125 (342)
T ss_pred             HHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHH
Confidence            57899999999999999999876654              35789999996 5898887543  5899999999999999


Q ss_pred             HHHHhhcCCCCCeEeccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhc-CCCCchhHH
Q 021891           68 GLAFLHEEAERPVIYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMT-GHLTSRSDV  144 (306)
Q Consensus        68 ~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  144 (306)
                      ||.|||+.+   ++||||||+||+++. ++.+||+|||+++........ .......++..|+|||++.+ ..++.++||
T Consensus       126 aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  202 (342)
T cd07854         126 GLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM  202 (342)
T ss_pred             HHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhH
Confidence            999999988   999999999999974 567899999999764322111 11122357888999998754 568899999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhc--cccccccc----cC-CccCC-----CCCHHHHHHHHHHHHH
Q 021891          145 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG--ERRRFYRL----ID-PRLEG-----HFSIKGAQKAAQLAAH  212 (306)
Q Consensus       145 wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~-~~~~~-----~~~~~~~~~~~~li~~  212 (306)
                      |||||++|+|++|+.||....................  ....+...    .. .....     ......+.++.+|+.+
T Consensus       203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  282 (342)
T cd07854         203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ  282 (342)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence            9999999999999999976543221111000000000  00000000    00 00000     0011234678899999


Q ss_pred             cccCCCCCCCCHHHHHHHh
Q 021891          213 CLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       213 ~l~~~p~~Rps~~ell~~l  231 (306)
                      ||+.||.+|||+.+++++-
T Consensus       283 ~L~~dP~~R~t~~ell~h~  301 (342)
T cd07854         283 ILTFNPMDRLTAEEALMHP  301 (342)
T ss_pred             HhCCCchhccCHHHHhCCC
Confidence            9999999999999999863


No 372
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00  E-value=6.5e-34  Score=248.59  Aligned_cols=219  Identities=25%  Similarity=0.341  Sum_probs=161.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEe-CCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +.+|++++++++||||+++++++.. .+..++|+||+ +++|.+++...  .+++..+..++.|+++||.|||+.+   +
T Consensus        56 ~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~---i  129 (328)
T cd07856          56 TYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAG---V  129 (328)
T ss_pred             HHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence            5689999999999999999999876 55789999999 56898887533  5788899999999999999999998   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~  159 (306)
                      +||||+|+||+++.++.++|+|||++......     .....++..|+|||.+.+ ..++.++|||||||++|+|++|..
T Consensus       130 iH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~  204 (328)
T cd07856         130 VHRDLKPSNILINENCDLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKP  204 (328)
T ss_pred             ccCCCCHHHEeECCCCCEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999998754321     123456788999998765 578999999999999999999999


Q ss_pred             CCCCCCCCCCcchHH---------hhhhhh-ccccccccccCCccC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          160 SMDKNRPNGEHNLVE---------WARPHL-GERRRFYRLIDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       160 pf~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ||...........+.         +..... .....+.........   .......+..+.++|.+||+.+|++|||+.+
T Consensus       205 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~e  284 (328)
T cd07856         205 LFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAE  284 (328)
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            997543211100000         000000 000000000000000   0000113468899999999999999999999


Q ss_pred             HHHHh
Q 021891          227 VVEAL  231 (306)
Q Consensus       227 ll~~l  231 (306)
                      ++.+-
T Consensus       285 ll~~~  289 (328)
T cd07856         285 ALAHP  289 (328)
T ss_pred             HhcCC
Confidence            99874


No 373
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00  E-value=3.5e-34  Score=252.06  Aligned_cols=219  Identities=23%  Similarity=0.330  Sum_probs=160.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|++++++++|+||+++++++...      ...+++++++ +++|.+++...  .+++..++.++.|++.||.|||+.
T Consensus        63 ~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~  139 (345)
T cd07877          63 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA  139 (345)
T ss_pred             HHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            56799999999999999999988643      3467888887 77998877443  589999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                      +   ++||||||+||+++.++.+||+|||+++.....     .....++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus       140 ~---ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el  211 (345)
T cd07877         140 D---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL  211 (345)
T ss_pred             C---eeecCCChHHEEEcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHH
Confidence            8   999999999999999999999999998764322     223467889999998876 5688999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhh--------hhhcc--ccccccccCCccC---CCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWAR--------PHLGE--RRRFYRLIDPRLE---GHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|..||...........+....        .....  ...+...+.....   .......+.++.+||.+||+.||.+|
T Consensus       212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  291 (345)
T cd07877         212 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR  291 (345)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhc
Confidence            99999996543221111000000        00000  0000000000000   00000124678999999999999999


Q ss_pred             CCHHHHHHHh
Q 021891          222 PLMSEVVEAL  231 (306)
Q Consensus       222 ps~~ell~~l  231 (306)
                      |++.+++.+-
T Consensus       292 ~t~~e~l~h~  301 (345)
T cd07877         292 ITAAQALAHA  301 (345)
T ss_pred             CCHHHHhcCh
Confidence            9999999864


No 374
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.6e-34  Score=244.26  Aligned_cols=213  Identities=24%  Similarity=0.353  Sum_probs=166.2

Q ss_pred             HHHHHHhcCCCCcccceeeEEE-eCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCI-EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      +|.+|.+.|+||-||++|++|. +.+.+|-|+|||+|.+|+-+|+.+ +.+++..+..|+.||+.||.||.+.. .+|||
T Consensus       516 REyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEik-pPIIH  593 (775)
T KOG1151|consen  516 REYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIK-PPIIH  593 (775)
T ss_pred             HHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccC-CCeee
Confidence            7899999999999999999986 456789999999999999988655 47999999999999999999999877 78999


Q ss_pred             ccCCCCCeEEcC---CCcEEEeccCCcccCCCCCcc-----eeeecccccccccCCcchhcC----CCCchhHHHHHHHH
Q 021891           83 RDFKTSNILLDA---DYNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTG----HLTSRSDVYSFGVV  150 (306)
Q Consensus        83 ~dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~i  150 (306)
                      -||||.|||+-.   -|.+||+|||+++.+.+....     .......||.||++||++.-+    .++.|+||||+|+|
T Consensus       594 YDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVI  673 (775)
T KOG1151|consen  594 YDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVI  673 (775)
T ss_pred             eccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehh
Confidence            999999999943   477999999999987654332     233457899999999998633    56889999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          151 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       151 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      +|..+.|+.||..+.....  .+..  ..+-...   +.--|..     .-.+.++.+||++||++.-++|....++..+
T Consensus       674 FyQClYGrKPFGhnqsQQd--ILqe--NTIlkAt---EVqFP~K-----PvVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  674 FYQCLYGRKPFGHNQSQQD--ILQE--NTILKAT---EVQFPPK-----PVVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             hhhhhccCCCCCCchhHHH--HHhh--hchhcce---eccCCCC-----CccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence            9999999999986543211  0000  0000000   0000100     1224688899999999999999998888764


No 375
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00  E-value=2.7e-34  Score=252.55  Aligned_cols=218  Identities=22%  Similarity=0.302  Sum_probs=161.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      +.+|+++|++++|+||+++++++..+.      ..++||||+ +++|.+++..  ..+++..+..++.|++.||.|||+.
T Consensus        61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~  137 (343)
T cd07880          61 AYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA  137 (343)
T ss_pred             HHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            568999999999999999999987654      358999999 6799988754  3689999999999999999999998


Q ss_pred             CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHH
Q 021891           76 AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el  154 (306)
                      +   |+||||||+||+++.++.++|+|||++......     .....++..|+|||.+.+ ..++.++|+|||||++|+|
T Consensus       138 g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l  209 (343)
T cd07880         138 G---IIHRDLKPGNLAVNEDCELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEM  209 (343)
T ss_pred             C---eecCCCCHHHEEEcCCCCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            8   999999999999999999999999999865332     123456889999999875 4688999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchH-H--------hhhhhh-ccccccccccCCc---cCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLV-E--------WARPHL-GERRRFYRLIDPR---LEGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~-~--------~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                      ++|..||...........+ .        +..... .....+...+...   .........+..+.++|.+||+.||++|
T Consensus       210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  289 (343)
T cd07880         210 LTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESR  289 (343)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhC
Confidence            9999999754321110000 0        000000 0000000000000   0000111234578899999999999999


Q ss_pred             CCHHHHHHH
Q 021891          222 PLMSEVVEA  230 (306)
Q Consensus       222 ps~~ell~~  230 (306)
                      ||+.+++++
T Consensus       290 ~t~~~~l~~  298 (343)
T cd07880         290 ITAAEALAH  298 (343)
T ss_pred             CCHHHHhcC
Confidence            999999975


No 376
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00  E-value=8.2e-35  Score=237.77  Aligned_cols=219  Identities=23%  Similarity=0.306  Sum_probs=167.0

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCC------eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDD------QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      .+|+.++..++|+||++++.+|.-.+      ..|+|||+|. .+|...+.   -.++-..+..++.|++.|+.|||+.+
T Consensus        63 ~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~  138 (369)
T KOG0665|consen   63 YRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVIL---MELDHETISYILYQMLCGIKHLHSAG  138 (369)
T ss_pred             hhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcc
Confidence            47999999999999999999987543      5699999995 59999886   35788999999999999999999999


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                         |+||||||+||++..++.+||.|||+|+.....   ...+..+.|..|+|||++.+-.|.+.+||||+||++.||++
T Consensus       139 ---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~  212 (369)
T KOG0665|consen  139 ---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELIL  212 (369)
T ss_pred             ---eeecccCcccceecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhh
Confidence               999999999999999999999999999874332   34455678899999999998889999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHH----------------hhhhhhccc-----cccccccCC-ccCC--CCCHHHHHHHHHHHHH
Q 021891          157 GRRSMDKNRPNGEHNLVE----------------WARPHLGER-----RRFYRLIDP-RLEG--HFSIKGAQKAAQLAAH  212 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~----------------~~~~~~~~~-----~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~  212 (306)
                      |...|.+...-+.-..+.                .++......     ..+.+.+.. .+..  +.+......+.+++.+
T Consensus       213 ~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~  292 (369)
T KOG0665|consen  213 GTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSK  292 (369)
T ss_pred             ceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHH
Confidence            999988643322111110                000000000     111111111 1111  1112234678999999


Q ss_pred             cccCCCCCCCCHHHHHHHh
Q 021891          213 CLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       213 ~l~~~p~~Rps~~ell~~l  231 (306)
                      ||..||++|.|++++|.|.
T Consensus       293 MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  293 MLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             hhccChhhcccHHHHhcCC
Confidence            9999999999999999974


No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00  E-value=1.4e-33  Score=266.61  Aligned_cols=102  Identities=28%  Similarity=0.333  Sum_probs=95.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|+||+++++++...+..|+||||+.+++|.+++... ..+++..++.++.||+.||.|||..+   |+
T Consensus        51 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~g---Ii  126 (669)
T cd05610          51 VQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHG---II  126 (669)
T ss_pred             HHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EE
Confidence            678999999999999999999999999999999999999999998654 36899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAK  107 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~  107 (306)
                      ||||||+|||++.++.+||+|||+++
T Consensus       127 HrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610         127 HRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999999999999999999886


No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.1e-34  Score=241.82  Aligned_cols=194  Identities=26%  Similarity=0.387  Sum_probs=162.2

Q ss_pred             HHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 021891            5 EVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR   83 (306)
Q Consensus         5 E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~   83 (306)
                      |-++|.-. +-|.+++++.+|++-+.+|+||||+.||+|.-++.+-+ ++.+..+..++..|+.||-+||+++   ||+|
T Consensus       399 EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~kg---IiYR  474 (683)
T KOG0696|consen  399 EKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSKG---IIYR  474 (683)
T ss_pred             hhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcCC---eeee
Confidence            44555444 45788999999999999999999999999999886655 6889999999999999999999999   9999


Q ss_pred             cCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 021891           84 DFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDK  163 (306)
Q Consensus        84 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  163 (306)
                      |||.+||+++.+|++||+|||+++.-...+.  .+..++||+.|+|||++...+|+.++|.||+|++||||+.|++||.+
T Consensus       475 DLKLDNvmLd~eGHiKi~DFGmcKEni~~~~--TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  475 DLKLDNVMLDSEGHIKIADFGMCKENIFDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             eccccceEeccCCceEeeecccccccccCCc--ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999999986433322  34568999999999999999999999999999999999999999998


Q ss_pred             CCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          164 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      .+..+....+.                +  ..-.++...+.++.++++..|.++|.+|.
T Consensus       553 eDE~elF~aI~----------------e--hnvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  553 EDEDELFQAIM----------------E--HNVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             CCHHHHHHHHH----------------H--ccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence            65543221111                0  01124556678999999999999999995


No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00  E-value=2.6e-33  Score=233.55  Aligned_cols=208  Identities=31%  Similarity=0.399  Sum_probs=168.4

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.+|++.+++++|+||+++++++......++++||+.+++|.+++.... .+++..++.++.+++.++.+||+.+   ++
T Consensus        34 ~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~---i~  109 (244)
T smart00220       34 ILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNG---II  109 (244)
T ss_pred             HHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcC---ee
Confidence            6789999999999999999999999999999999999999999986544 3899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |+||+|+||+++.++.++|+|||.+.......   ......++..|++||...+..++.++|||+||+++++|++|..||
T Consensus       110 h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~  186 (244)
T smart00220      110 HRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPF  186 (244)
T ss_pred             cCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999998764432   223456788999999998888999999999999999999999998


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .......  .......   ...      ....   ......+.++.+++.+||..+|++||++.+++++
T Consensus       187 ~~~~~~~--~~~~~~~---~~~------~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      187 PGDDQLL--ELFKKIG---KPK------PPFP---PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             CCCCcHH--HHHHHHh---ccC------CCCc---cccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence            6531111  1111000   000      0000   0000034688999999999999999999999974


No 380
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=5.2e-34  Score=265.24  Aligned_cols=210  Identities=22%  Similarity=0.258  Sum_probs=171.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |..|-.+|..-+.+-|++++-.|.+++++|+||||++||+|-.++.+.. ++++..+..++..|+.||.-||+.|   +|
T Consensus       122 F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mg---yV  197 (1317)
T KOG0612|consen  122 FREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMG---YV  197 (1317)
T ss_pred             HHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcc---ce
Confidence            6788889988889999999999999999999999999999999998877 8999999999999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh----c-CCCCchhHHHHHHHHHHHHHh
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM----T-GHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||||+|||+|..|++||+|||.+-.+...+.. .....+|||.|++||++.    + +.|+..+|.||+||++|||+.
T Consensus       198 HRDiKPDNvLld~~GHikLADFGsClkm~~dG~V-~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMly  276 (1317)
T KOG0612|consen  198 HRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV-RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLY  276 (1317)
T ss_pred             eccCCcceeEecccCcEeeccchhHHhcCCCCcE-EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHc
Confidence            9999999999999999999999998776654433 344568999999999996    3 578999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHh
Q 021891          157 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL---MSEVVEAL  231 (306)
Q Consensus       157 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~ell~~l  231 (306)
                      |..||....-.+....+.       .-+....+.     .  ..+.+.++.+||.+.+ -+|+.|..   ++++..|.
T Consensus       277 G~TPFYadslveTY~KIm-------~hk~~l~FP-----~--~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~Hp  339 (1317)
T KOG0612|consen  277 GETPFYADSLVETYGKIM-------NHKESLSFP-----D--ETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHP  339 (1317)
T ss_pred             CCCcchHHHHHHHHHHHh-------chhhhcCCC-----c--ccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCc
Confidence            999997643221111110       000000111     0  1235789999999988 47888887   88888865


No 381
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.5e-32  Score=242.27  Aligned_cols=201  Identities=26%  Similarity=0.365  Sum_probs=161.6

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      +.|-.||..-+.+-||++|-.|.+++.+|+||+|++||++..+|.+.+ -|++..+..++..+..|+++.|..|   +||
T Consensus       677 KAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG---FIH  752 (1034)
T KOG0608|consen  677 KAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG---FIH  752 (1034)
T ss_pred             hhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc---cee
Confidence            578899999999999999999999999999999999999999998776 6899999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCccc---------CCCCCcce-------------------------------eeeccc
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKD---------GPEGDKTH-------------------------------VSTRVM  122 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~---------~~~~~~~~-------------------------------~~~~~~  122 (306)
                      |||||+|||||.+|++||+||||++-         +..++...                               .....+
T Consensus       753 RDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslv  832 (1034)
T KOG0608|consen  753 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLV  832 (1034)
T ss_pred             cccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhc
Confidence            99999999999999999999999852         11110000                               011257


Q ss_pred             ccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHH
Q 021891          123 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG  202 (306)
Q Consensus       123 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (306)
                      ||..|+|||++....|+..+|.||.|+|||||+.|++||....+.+....+...+          ..++-....    +.
T Consensus       833 gt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~----------~~l~~~~~~----~l  898 (1034)
T KOG0608|consen  833 GTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWR----------NFLHIPYQG----NL  898 (1034)
T ss_pred             CCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehh----------hcccccccc----cc
Confidence            9999999999999999999999999999999999999999887766543332211          122222222    33


Q ss_pred             HHHHHHHHHHcccCCCCCCC
Q 021891          203 AQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       203 ~~~~~~li~~~l~~~p~~Rp  222 (306)
                      +.++.+||.+++ -+++.|.
T Consensus       899 s~e~~~li~kLc-~sad~RL  917 (1034)
T KOG0608|consen  899 SKEALDLIQKLC-CSADSRL  917 (1034)
T ss_pred             CHHHHHHHHHHh-cChhhhh
Confidence            567778887754 3567775


No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00  E-value=9e-35  Score=232.07  Aligned_cols=212  Identities=26%  Similarity=0.311  Sum_probs=161.5

Q ss_pred             HHHHHHHHh-cCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLG-DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR----RSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~-~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      |+.|.+... .=+.||||++||.+..++..|+.||+| ..||+.+...    ....+++..+-.+....+.||.||.+.-
T Consensus       109 ll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l  187 (361)
T KOG1006|consen  109 LLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL  187 (361)
T ss_pred             HHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh
Confidence            455555433 346899999999999999999999999 4588776532    3456999999999999999999998754


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh--cCCCCchhHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~el  154 (306)
                      .  |||||+||+|||++..|.+||||||++-.+.+.   ...+...|...|||||-+.  +..|+.++||||||+++||+
T Consensus       188 k--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~Ev  262 (361)
T KOG1006|consen  188 K--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEV  262 (361)
T ss_pred             h--hhhccCChhheEEecCCCEeeecccchHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeee
Confidence            3  999999999999999999999999999775432   2234457888999999986  34699999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      .||..|+.++..     +.+.......  +....+..+    .-....+..+..+|..||.+|...||...+++++
T Consensus       263 AtG~fPyr~w~s-----vfeql~~Vv~--gdpp~l~~~----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  263 ATGNFPYRKWDS-----VFEQLCQVVI--GDPPILLFD----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             ecCCCCcchHHH-----HHHHHHHHHc--CCCCeecCc----ccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            999999987643     1111111110  010111111    1123356789999999999999999999999874


No 383
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00  E-value=4.8e-34  Score=247.06  Aligned_cols=210  Identities=23%  Similarity=0.268  Sum_probs=171.4

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      ++++|+.||+++.||.||.+...|++.+..+.|||.+.|.=|.-.+.....++++..-..++.||+.||.|||.++   |
T Consensus       609 qlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---I  685 (888)
T KOG4236|consen  609 QLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---I  685 (888)
T ss_pred             HHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---e
Confidence            3789999999999999999999999999999999999654444444455668999999999999999999999999   9


Q ss_pred             EeccCCCCCeEEcCC---CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           81 IYRDFKTSNILLDAD---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        81 iH~dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                      +|+||||+|||+...   -.+||||||.|+.+....   -....+||+.|.|||++..+.|+..-|+||+|+|+|.-++|
T Consensus       686 vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSG  762 (888)
T KOG4236|consen  686 VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSG  762 (888)
T ss_pred             eeccCCchheeeccCCCCCceeeccccceeecchhh---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecc
Confidence            999999999999654   468999999999976533   24457899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      -.||....+..  +.+..+          .-+..+..    ..+.+..+++||..+|+..-.+|.|.++.+.|.+
T Consensus       763 TFPFNEdEdIn--dQIQNA----------aFMyPp~P----W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W  821 (888)
T KOG4236|consen  763 TFPFNEDEDIN--DQIQNA----------AFMYPPNP----WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW  821 (888)
T ss_pred             cccCCCccchh--HHhhcc----------ccccCCCc----hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence            99997543221  111110          01122222    2345678999999999999999999999998754


No 384
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-33  Score=255.88  Aligned_cols=208  Identities=27%  Similarity=0.382  Sum_probs=161.3

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCH---HHHHHHHHHHHHHHHHhhcCCCC
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~---~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      ++|+++|+.- +|||||++|+.-.+....||..|.|. .+|.+++.........   ...+.++.|+++||++||+.+  
T Consensus       550 ~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--  626 (903)
T KOG1027|consen  550 QREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--  626 (903)
T ss_pred             HHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--
Confidence            6899999988 79999999999888999999999995 5999999774211111   345778999999999999988  


Q ss_pred             CeEeccCCCCCeEEcC---C--CcEEEeccCCcccCCCCCcc-eeeecccccccccCCcchhcCCCCchhHHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDA---D--YNAKLSDFGLAKDGPEGDKT-HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL  152 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~---~--~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  152 (306)
                       ||||||||.||||+.   +  .+++|+|||+++....+... .......||.+|+|||++....-..++|||||||++|
T Consensus       627 -iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfy  705 (903)
T KOG1027|consen  627 -IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFY  705 (903)
T ss_pred             -cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEE
Confidence             999999999999976   3  46899999999987654332 2234567999999999999888888999999999999


Q ss_pred             HHHhC-CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          153 EMLTG-RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       153 elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +.++| ..||......+..-+        .....+..+. +        ....++.+||.+|+..+|..||++.+|+.|.
T Consensus       706 YvltgG~HpFGd~~~R~~NIl--------~~~~~L~~L~-~--------~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HP  768 (903)
T KOG1027|consen  706 YVLTGGSHPFGDSLERQANIL--------TGNYTLVHLE-P--------LPDCEAKDLISRMLNPDPQLRPSATDVLNHP  768 (903)
T ss_pred             EEecCCccCCCchHHhhhhhh--------cCccceeeec-c--------CchHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence            99886 799986533211000        0000000000 0        0011788999999999999999999999874


No 385
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.9e-33  Score=254.04  Aligned_cols=211  Identities=26%  Similarity=0.352  Sum_probs=179.5

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      +|.+|+-+|.+|+|||+++++++|.... +.||++|+++|+|.|+++.+...+-....+.|..||++||.|||.+.   +
T Consensus       744 e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---l  819 (1177)
T KOG1025|consen  744 ELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---L  819 (1177)
T ss_pred             HHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---h
Confidence            5789999999999999999999998776 88999999999999999988888999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRR  159 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~  159 (306)
                      +||||...||||..-..+||.|||+++...............-.+.|||-|.+....|+.++||||||+.+||++| |..
T Consensus       820 VHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~  899 (1177)
T KOG1025|consen  820 VHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAK  899 (1177)
T ss_pred             hhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCC
Confidence            9999999999999999999999999998776655544444444667999999999999999999999999999887 889


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |+.+....+..+..+..       .   +       -..+..++.+++.++.+||..|++.||+++++...+.
T Consensus       900 Py~gi~~~eI~dlle~g-------e---R-------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs  955 (1177)
T KOG1025|consen  900 PYDGIPAEEIPDLLEKG-------E---R-------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFS  955 (1177)
T ss_pred             ccCCCCHHHhhHHHhcc-------c---c-------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence            98876554443332211       1   1       1233456789999999999999999999999998764


No 386
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.98  E-value=6.3e-33  Score=267.96  Aligned_cols=201  Identities=19%  Similarity=0.226  Sum_probs=145.4

Q ss_pred             HhcCCC-CcccceeeEE-------EeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            9 LGDLVH-LNLVKLIGYC-------IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         9 l~~l~H-~niv~~~~~~-------~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .+.++| .||++++++|       ...+.+++++||+ +++|.+++......+++..++.++.||+.||.|||+++   |
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---I  101 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG---I  101 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            345677 6888999987       3334677889988 56999999766667999999999999999999999988   9


Q ss_pred             EeccCCCCCeEEcCC-------------------CcEEEeccCCcccCCCCCc--------------ceeeecccccccc
Q 021891           81 IYRDFKTSNILLDAD-------------------YNAKLSDFGLAKDGPEGDK--------------THVSTRVMGTYGY  127 (306)
Q Consensus        81 iH~dlkp~Nill~~~-------------------~~~kl~Dfg~a~~~~~~~~--------------~~~~~~~~gt~~y  127 (306)
                      +||||||+||||+..                   +.+|++|||+++.......              ........||+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            999999999999653                   4456666666653211000              0001124578899


Q ss_pred             cCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHH
Q 021891          128 AAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA  207 (306)
Q Consensus       128 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (306)
                      ||||++.+..|+.++|||||||++|||++|.+|+.....     ......    .     ....+...     .......
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~-----~~~~~~~  242 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TMSSLR----H-----RVLPPQIL-----LNWPKEA  242 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HHHHHH----H-----hhcChhhh-----hcCHHHH
Confidence            999999999999999999999999999998887643210     000000    0     01111111     1123456


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          208 QLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       208 ~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      +++.+||+.+|.+||++.|++++..
T Consensus       243 ~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        243 SFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             HHHHHhCCCChhhCcChHHHhhchh
Confidence            8899999999999999999998653


No 387
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97  E-value=1.8e-31  Score=228.39  Aligned_cols=228  Identities=29%  Similarity=0.420  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcC--CCCcccceeeEEEeCC----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDL--VHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l--~H~niv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      |++|-+|.+..  +|+||+++++.-+...    .++||++|-+.|+|.++|..+  .++|.....++..++.||+|||+.
T Consensus       249 ~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee  326 (534)
T KOG3653|consen  249 FQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEE  326 (534)
T ss_pred             HHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhccc
Confidence            77888888764  8999999999877665    789999999999999999766  489999999999999999999987


Q ss_pred             CC------CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCC-----chhH
Q 021891           76 AE------RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLT-----SRSD  143 (306)
Q Consensus        76 ~~------~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-----~~~D  143 (306)
                      -+      .+|+|||||..||||..++++.|+|||+|..+..+.........+||.+|||||++.+. .+.     ...|
T Consensus       327 ~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~D  406 (534)
T KOG3653|consen  327 LPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRID  406 (534)
T ss_pred             CCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHH
Confidence            53      35999999999999999999999999999987765444334457899999999999764 222     3699


Q ss_pred             HHHHHHHHHHHHhCCCCCC-CCCCCCCcch---------HHhhhhhhccccccccccCCccCCCC-CHHHHHHHHHHHHH
Q 021891          144 VYSFGVVLLEMLTGRRSMD-KNRPNGEHNL---------VEWARPHLGERRRFYRLIDPRLEGHF-SIKGAQKAAQLAAH  212 (306)
Q Consensus       144 iwslG~il~elltg~~pf~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  212 (306)
                      |||+|.|+|||++...-+. +..+......         .+..+.....     +...|.+...+ .......+.+.+..
T Consensus       407 vYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~-----kK~RP~~p~~W~~h~~~~~l~et~Ee  481 (534)
T KOG3653|consen  407 VYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVR-----KKQRPKIPDAWRKHAGMAVLCETIEE  481 (534)
T ss_pred             HHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHh-----hccCCCChhhhhcCccHHHHHHHHHH
Confidence            9999999999999655443 1111111100         1100000000     01111111111 01335678999999


Q ss_pred             cccCCCCCCCCHHHHHHHhCCCCC
Q 021891          213 CLSRDPKARPLMSEVVEALKPLPN  236 (306)
Q Consensus       213 ~l~~~p~~Rps~~ell~~l~~~~~  236 (306)
                      ||..|++.|.|+.=+-+.+..+..
T Consensus       482 CWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  482 CWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             HcCCchhhhhhhHHHHHHHHHHhc
Confidence            999999999998887777665544


No 388
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.2e-33  Score=226.67  Aligned_cols=225  Identities=21%  Similarity=0.301  Sum_probs=168.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~   76 (306)
                      +-+|+++|..++|.|++..++...-..     .+|.|+|++.. +|.+.|.. .+.++...++-++.||+.||.|||+.+
T Consensus        99 vFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-DLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~  176 (449)
T KOG0664|consen   99 VFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-DLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTAN  176 (449)
T ss_pred             HHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-hhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcc
Confidence            468999999999999999998765432     46789999954 88887754 457999999999999999999999999


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHH
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell  155 (306)
                         |.||||||.|+|++.|..+||||||+++.-...+... .+..+-|..|+|||++.| ..|+.++||||+|||+.||+
T Consensus       177 ---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELL  252 (449)
T KOG0664|consen  177 ---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELL  252 (449)
T ss_pred             ---hhhccCCCccEEeccCceEEecccccccccchhhhhh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHH
Confidence               9999999999999999999999999999755443333 334456889999999986 47999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhh--------ccccc---ccccc-CCccCC--CC--CHHHHHHHHHHHHHcccCCCC
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHL--------GERRR---FYRLI-DPRLEG--HF--SIKGAQKAAQLAAHCLSRDPK  219 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~-~~~~~~--~~--~~~~~~~~~~li~~~l~~~p~  219 (306)
                      ..+..|+...+....+++.-....-        -++.+   +.... .|...-  .+  +.....+...++.++|..||+
T Consensus       253 gRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~d  332 (449)
T KOG0664|consen  253 QRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPD  332 (449)
T ss_pred             hhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCc
Confidence            9999998877665554443221100        00000   00000 000000  00  112234677899999999999


Q ss_pred             CCCCHHHHHHHhC
Q 021891          220 ARPLMSEVVEALK  232 (306)
Q Consensus       220 ~Rps~~ell~~l~  232 (306)
                      +|.+..+.+.++-
T Consensus       333 kris~~~A~~~~~  345 (449)
T KOG0664|consen  333 KRISVEEALQHRY  345 (449)
T ss_pred             ccccHhhhccccc
Confidence            9999999998763


No 389
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.2e-31  Score=220.97  Aligned_cols=203  Identities=28%  Similarity=0.407  Sum_probs=159.9

Q ss_pred             HHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            4 AEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         4 ~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      -|-.+..+- +||.+|-+..+|.++..+++|.||++||+|.-++.+ .++++++.+..+...|..||.|||+.|   ||+
T Consensus       299 tek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rg---iiy  374 (593)
T KOG0695|consen  299 TEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERG---IIY  374 (593)
T ss_pred             hhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcC---eee
Confidence            344555555 799999999999999999999999999999888844 457999999999999999999999999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD  162 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  162 (306)
                      ||||.+|+|+|..|.+||+|+|+++.-...  ...+..++||+.|.|||++.+..|...+|.|+||++++||+.|+.||.
T Consensus       375 rdlkldnvlldaeghikltdygmcke~l~~--gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  375 RDLKLDNVLLDAEGHIKLTDYGMCKEGLGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             eeccccceEEccCCceeecccchhhcCCCC--CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            999999999999999999999999863322  223456899999999999999999999999999999999999999997


Q ss_pred             CCCCCC-CcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 021891          163 KNRPNG-EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL  223 (306)
Q Consensus       163 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  223 (306)
                      -..-.+ ..+...+....+-++         .+  .++...+-.+..+++.-|.+||.+|..
T Consensus       453 ivgm~n~d~ntedylfqvilek---------qi--riprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  453 IVGMDNPDMNTEDYLFQVILEK---------QI--RIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             eecCCCcccchhHHHHHHHhhh---------cc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence            432211 122222222211111         11  112223445668899999999999953


No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97  E-value=2.1e-31  Score=208.69  Aligned_cols=215  Identities=19%  Similarity=0.268  Sum_probs=165.0

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeC--CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      .++|++||..|. ||||++++++..+.  ....+|+||++..+...+.    ..++.-.+..++.+++.||.|||+.|  
T Consensus        79 IkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~G--  152 (338)
T KOG0668|consen   79 IKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMG--  152 (338)
T ss_pred             HHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcC--
Confidence            479999999996 99999999998875  4678999999988877765    35778889999999999999999999  


Q ss_pred             CeEeccCCCCCeEEcCC-CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHh
Q 021891           79 PVIYRDFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt  156 (306)
                       |+|||+||.|++||.. ..++|+|+|+|..+..+....   ..+.+..|.-||++.. ..|+.+-|+|||||++..|++
T Consensus       153 -ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn---VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miF  228 (338)
T KOG0668|consen  153 -IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF  228 (338)
T ss_pred             -cccccCCcceeeechhhceeeeeecchHhhcCCCceee---eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHh
Confidence             9999999999999865 569999999999876654332   2345778899999874 578999999999999999999


Q ss_pred             CCCCCCCCCCCCCc-chHHhhh-----------hhh------------ccccccccccCCccCCCCCHHHHHHHHHHHHH
Q 021891          157 GRRSMDKNRPNGEH-NLVEWAR-----------PHL------------GERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH  212 (306)
Q Consensus       157 g~~pf~~~~~~~~~-~~~~~~~-----------~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  212 (306)
                      .+.||.....+... ..+..+.           ..+            ..++.+..++.+....    -.+.++.+|+.+
T Consensus       229 rkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~h----l~~peaiDlldk  304 (338)
T KOG0668|consen  229 RKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQH----LVSPEAIDLLDK  304 (338)
T ss_pred             ccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccc----cCChHHHHHHHH
Confidence            99999766554321 1111110           000            1112222222222111    124688999999


Q ss_pred             cccCCCCCCCCHHHHHHH
Q 021891          213 CLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       213 ~l~~~p~~Rps~~ell~~  230 (306)
                      +|..|..+|+|++|+++|
T Consensus       305 lLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  305 LLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHhhccccccchHHHhcC
Confidence            999999999999999985


No 391
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97  E-value=2.6e-32  Score=235.84  Aligned_cols=221  Identities=23%  Similarity=0.260  Sum_probs=170.1

Q ss_pred             HHHHHHHhcCCC------CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            3 QAEVNFLGDLVH------LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         3 ~~E~~il~~l~H------~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      +.|++||++|+.      -|+++++-.|...+++|||+|-+ .-+|.+.|.+.+  ..|....+..++.|++.||..|-.
T Consensus       476 l~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~  554 (752)
T KOG0670|consen  476 LKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK  554 (752)
T ss_pred             hHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh
Confidence            579999999953      38999999999999999999999 569999997654  457888999999999999999999


Q ss_pred             CCCCCeEeccCCCCCeEEcCC-CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           75 EAERPVIYRDFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      .+   |+|.||||+|||+++. ..+||||||.|........+    ...-+..|+|||++.|..|+...|+||+||+|||
T Consensus       555 c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYE  627 (752)
T KOG0670|consen  555 CG---VLHADIKPDNILVNESKNILKLCDFGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYE  627 (752)
T ss_pred             cC---eeecccCccceEeccCcceeeeccCcccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEE
Confidence            88   9999999999999875 56799999999876544322    2234667999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcchHHhhh---------------hhhcccccc----------------ccccCC------ccCC
Q 021891          154 MLTGRRSMDKNRPNGEHNLVEWAR---------------PHLGERRRF----------------YRLIDP------RLEG  196 (306)
Q Consensus       154 lltg~~pf~~~~~~~~~~~~~~~~---------------~~~~~~~~~----------------~~~~~~------~~~~  196 (306)
                      |.||+..|.+...+.++.+..-..               .++.....|                ...+.|      .+..
T Consensus       628 lYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~  707 (752)
T KOG0670|consen  628 LYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIA  707 (752)
T ss_pred             eeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhc
Confidence            999999999876654433221111               111111111                011111      0000


Q ss_pred             --CC---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          197 --HF---SIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       197 --~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                        .+   ......++.+|+.+||..||++|.|..++|+|.
T Consensus       708 ~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~Hp  747 (752)
T KOG0670|consen  708 VQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHP  747 (752)
T ss_pred             cCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCC
Confidence              01   223456889999999999999999999999874


No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97  E-value=1.5e-31  Score=206.39  Aligned_cols=156  Identities=27%  Similarity=0.366  Sum_probs=132.3

Q ss_pred             HHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            3 QAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF---RRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         3 ~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~---~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      .+|+.+.... ..|.+|.+||........++.||.|. .||+.+..   +.+..+++..+-+++..++.||.|||++-+ 
T Consensus        92 L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~-  169 (282)
T KOG0984|consen   92 LMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS-  169 (282)
T ss_pred             HHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh-
Confidence            4566654444 68999999999999999999999994 58877653   457789999999999999999999999754 


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc----CCCCchhHHHHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEM  154 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el  154 (306)
                       ++|||+||+||||+.+|++|+||||++-.+.+..   ..+...|...|||||.+..    ..|+-|+||||||+.++||
T Consensus       170 -vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiEl  245 (282)
T KOG0984|consen  170 -VIHRDVKPSNILINYDGQVKICDFGISGYLVDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEM  245 (282)
T ss_pred             -hhhccCCcceEEEccCCcEEEcccccceeehhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhh
Confidence             9999999999999999999999999998765432   2233568889999999863    4799999999999999999


Q ss_pred             HhCCCCCCCC
Q 021891          155 LTGRRSMDKN  164 (306)
Q Consensus       155 ltg~~pf~~~  164 (306)
                      .+++.||..+
T Consensus       246 A~lr~PY~~w  255 (282)
T KOG0984|consen  246 AILRFPYESW  255 (282)
T ss_pred             hhcccccccc
Confidence            9999999765


No 393
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97  E-value=5.4e-31  Score=246.93  Aligned_cols=183  Identities=28%  Similarity=0.431  Sum_probs=134.3

Q ss_pred             eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           29 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        29 ~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .+||=||||+...|.+++.++...-.....|.++++|++||.|+|+.|   +|||||||.|||++.++.|||+|||+|+.
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchh
Confidence            357889999987777777655422257888999999999999999999   99999999999999999999999999986


Q ss_pred             CC------C----------CCcceeeecccccccccCCcchhcC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 021891          109 GP------E----------GDKTHVSTRVMGTYGYAAPEYVMTG---HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE  169 (306)
Q Consensus       109 ~~------~----------~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  169 (306)
                      ..      +          +......+..+||.-|+|||++.+.   .|+.|+|+||||+|+|||+.   ||...  .+.
T Consensus       747 ~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MER  821 (1351)
T KOG1035|consen  747 LKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MER  821 (1351)
T ss_pred             hhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch--HHH
Confidence            11      0          1111133557899999999999754   59999999999999999985   35432  111


Q ss_pred             cchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          170 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ...+...+     ...+    ...  ..+.......-..+|.+|++.||.+|||+.|+|+.
T Consensus       822 a~iL~~LR-----~g~i----P~~--~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  822 ASILTNLR-----KGSI----PEP--ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             HHHHHhcc-----cCCC----CCC--cccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence            11111111     0000    000  11222333456789999999999999999999974


No 394
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.97  E-value=2.1e-30  Score=206.33  Aligned_cols=166  Identities=25%  Similarity=0.240  Sum_probs=126.2

Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeee
Q 021891           40 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVST  119 (306)
Q Consensus        40 ~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~  119 (306)
                      |+|.+++..++..+++..++.++.||+.||.|||+.+         ||+||+++.++.+|+  ||+++......      
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~------   63 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ------   63 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc------
Confidence            6899999876777999999999999999999999854         999999999999999  99987653321      


Q ss_pred             cccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCC
Q 021891          120 RVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS  199 (306)
Q Consensus       120 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (306)
                       ..||+.|+|||++.+..++.++|||||||++|||++|..||.......  ............       ..+.. ....
T Consensus        64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~-------~~~~~-~~~~  132 (176)
T smart00750       64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPA-------DDPRD-RSNL  132 (176)
T ss_pred             -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhcc-------CCccc-cccH
Confidence             257899999999999999999999999999999999999996542211  111111100000       00000 0011


Q ss_pred             HHHHH--HHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          200 IKGAQ--KAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       200 ~~~~~--~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                      .....  .+.+++.+||..||++||++.++++++..
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            22233  68999999999999999999999998753


No 395
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97  E-value=9.1e-31  Score=219.43  Aligned_cols=211  Identities=25%  Similarity=0.333  Sum_probs=171.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC-CeeEEEEEcCCCCCHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED-DQRLLVYEFMPRGSLENHLFR-------RSLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~-------~~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      |..|.-+|..+.|||+..+.+++.++ ...+.++.++..|+|+.++..       ..+.++..+...++.|++.|++|||
T Consensus       334 ~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh  413 (563)
T KOG1024|consen  334 LLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH  413 (563)
T ss_pred             HHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH
Confidence            56777788889999999999988764 467888999999999999972       2345777788899999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      +.+   +||.||...|++|++.-.+||+|=.+++..-+.+..-..........||++|.+....|+.++||||||+++||
T Consensus       414 ~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWE  490 (563)
T KOG1024|consen  414 NHG---VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWE  490 (563)
T ss_pred             hcC---cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHH
Confidence            999   99999999999999999999999999988655544333333344667999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          154 MLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       154 llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      |+| |+.|+...++.+....+.       ++.          .-..+..++++++.++.-||...|++||+++++..-|.
T Consensus       491 Lmtlg~~PyaeIDPfEm~~ylk-------dGy----------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  491 LMTLGKLPYAEIDPFEMEHYLK-------DGY----------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS  553 (563)
T ss_pred             HHhcCCCCccccCHHHHHHHHh-------ccc----------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            988 788887665544322221       111          11234457899999999999999999999999998774


No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=2.7e-30  Score=221.87  Aligned_cols=223  Identities=21%  Similarity=0.277  Sum_probs=165.6

Q ss_pred             HHHHHHHhcCC-----C---CcccceeeEEEeC----CeeEEEEEcCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHH
Q 021891            3 QAEVNFLGDLV-----H---LNLVKLIGYCIED----DQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGL   69 (306)
Q Consensus         3 ~~E~~il~~l~-----H---~niv~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l   69 (306)
                      ..||++|+++.     |   .+||+++++|...    .++|+|+|++ |.+|..+|... .+.++...++.|++||+.||
T Consensus       122 lDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GL  200 (590)
T KOG1290|consen  122 LDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGL  200 (590)
T ss_pred             HHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHH
Confidence            47999999982     3   3799999999874    4899999999 66888888654 56799999999999999999


Q ss_pred             HHhhcCCCCCeEeccCCCCCeEEc--------------------------------------------------------
Q 021891           70 AFLHEEAERPVIYRDFKTSNILLD--------------------------------------------------------   93 (306)
Q Consensus        70 ~~LH~~~~~~iiH~dlkp~Nill~--------------------------------------------------------   93 (306)
                      .|||.+..  |||-||||+|||+.                                                        
T Consensus       201 dYLH~ecg--IIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~  278 (590)
T KOG1290|consen  201 DYLHRECG--IIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLK  278 (590)
T ss_pred             HHHHHhcC--ccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHh
Confidence            99998754  99999999999994                                                        


Q ss_pred             ----------------------------------------------------------CC--------------------
Q 021891           94 ----------------------------------------------------------AD--------------------   95 (306)
Q Consensus        94 ----------------------------------------------------------~~--------------------   95 (306)
                                                                                .+                    
T Consensus       279 r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~  358 (590)
T KOG1290|consen  279 RQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSA  358 (590)
T ss_pred             hhhhhhhhhhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccc
Confidence                                                                      00                    


Q ss_pred             --------------------------------CcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhH
Q 021891           96 --------------------------------YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD  143 (306)
Q Consensus        96 --------------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  143 (306)
                                                      -++||+|||-|++....     .+....|..|+|||++.+..|+..+|
T Consensus       359 t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~kh-----FT~DIQTRQYRapEVllGsgY~~~AD  433 (590)
T KOG1290|consen  359 TPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKH-----FTEDIQTRQYRAPEVLLGSGYSTSAD  433 (590)
T ss_pred             ccccccccCcCCccccccccccCCCCCCCccceeEEEeeccchhhhhhh-----hchhhhhhhccCcceeecCCCCCchh
Confidence                                            01577777777664322     12235688999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCC---CcchHHhhh------------------hhhccccccccccCCccC-------
Q 021891          144 VYSFGVVLLEMLTGRRSMDKNRPNG---EHNLVEWAR------------------PHLGERRRFYRLIDPRLE-------  195 (306)
Q Consensus       144 iwslG~il~elltg~~pf~~~~~~~---~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~-------  195 (306)
                      |||++|++|||+||...|......+   ....+....                  ..+...+.+..+-.-...       
T Consensus       434 iWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~  513 (590)
T KOG1290|consen  434 IWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLI  513 (590)
T ss_pred             HHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHH
Confidence            9999999999999998886533222   111111111                  111112222111111111       


Q ss_pred             --CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCC
Q 021891          196 --GHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKP  233 (306)
Q Consensus       196 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  233 (306)
                        -.++.+.+.++.+|+.-||+.+|++|||+.++++|.+-
T Consensus       514 eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwL  553 (590)
T KOG1290|consen  514 EKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWL  553 (590)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccc
Confidence              13677889999999999999999999999999998653


No 397
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=2.1e-30  Score=220.31  Aligned_cols=226  Identities=27%  Similarity=0.360  Sum_probs=169.7

Q ss_pred             HHHHHHHHhcC--CCCcccceeeEEEeCC----eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDL--VHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l--~H~niv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      |.+|.+|.+.+  +|+||+.+++.-..++    .+|||++|-+.|||.|+|.+  ..++.+...+++..+|.||++||..
T Consensus       250 WfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~e  327 (513)
T KOG2052|consen  250 WFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHME  327 (513)
T ss_pred             hhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHH
Confidence            67899999875  9999999999765543    67899999999999999966  3689999999999999999999964


Q ss_pred             -----CCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCc--ceeeecccccccccCCcchhcC----CC--Cchh
Q 021891           76 -----AERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVMTG----HL--TSRS  142 (306)
Q Consensus        76 -----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~----~~--~~~~  142 (306)
                           |+..|.|||||..||||.++|.+-|+|+|+|........  ....+..+||.+|||||++...    .+  -..+
T Consensus       328 I~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~A  407 (513)
T KOG2052|consen  328 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRA  407 (513)
T ss_pred             HhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHH
Confidence                 445699999999999999999999999999987544321  1223457899999999998642    22  2369


Q ss_pred             HHHHHHHHHHHHHhC----------CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCC-CCHHHHHHHHHHHH
Q 021891          143 DVYSFGVVLLEMLTG----------RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH-FSIKGAQKAAQLAA  211 (306)
Q Consensus       143 DiwslG~il~elltg----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~  211 (306)
                      ||||||.++||++-.          +.||.+..+.+...-..   ...-..    +.+.|.+... .+.+.-..+.+||+
T Consensus       408 DIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeM---rkVVCv----~~~RP~ipnrW~s~~~l~~m~klMk  480 (513)
T KOG2052|consen  408 DIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEM---RKVVCV----QKLRPNIPNRWKSDPALRVMAKLMK  480 (513)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHH---hcceee----cccCCCCCcccccCHHHHHHHHHHH
Confidence            999999999999863          46776655443311100   000011    1122222222 23345567889999


Q ss_pred             HcccCCCCCCCCHHHHHHHhCCCCC
Q 021891          212 HCLSRDPKARPLMSEVVEALKPLPN  236 (306)
Q Consensus       212 ~~l~~~p~~Rps~~ell~~l~~~~~  236 (306)
                      .||..||.-|.|+-.|.+.|..+.+
T Consensus       481 eCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  481 ECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HhhcCCchhhhHHHHHHHHHHHHhc
Confidence            9999999999999999998876654


No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97  E-value=3.2e-30  Score=238.54  Aligned_cols=200  Identities=21%  Similarity=0.256  Sum_probs=132.9

Q ss_pred             EeCCeeEEEEEcCCCCCHHHHhhcCCCC-------------------CCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 021891           25 IEDDQRLLVYEFMPRGSLENHLFRRSLP-------------------LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF   85 (306)
Q Consensus        25 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~-------------------l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dl   85 (306)
                      ......++|+||+.+++|.+++......                   .....+..++.||+.||.|||+.+   |+||||
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDL  281 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDV  281 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcC
Confidence            3456789999999999999988654311                   123456789999999999999988   999999


Q ss_pred             CCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC----------------------CCCchh
Q 021891           86 KTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG----------------------HLTSRS  142 (306)
Q Consensus        86 kp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~  142 (306)
                      ||+|||++. ++.+||+|||+++....... .......+++.|+|||.+...                      .++.++
T Consensus       282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        282 KPQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             CHHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            999999986 58999999999986543222 223446789999999976422                      234567


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCC----C--CHHHHHHHHHHHHHcccC
Q 021891          143 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH----F--SIKGAQKAAQLAAHCLSR  216 (306)
Q Consensus       143 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~li~~~l~~  216 (306)
                      |||||||++|||+++..++....    ................+.....+.....    +  .........+||.+||+.
T Consensus       361 DVwSlGviL~el~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~  436 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNLRSDSNL----IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF  436 (566)
T ss_pred             ccHHHHHHHHHHHhCcCCCchHH----HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence            99999999999998765533210    0000000000000000001111110000    0  000123456899999999


Q ss_pred             CCCCCCCHHHHHHHhC
Q 021891          217 DPKARPLMSEVVEALK  232 (306)
Q Consensus       217 ~p~~Rps~~ell~~l~  232 (306)
                      ||.+|||+.++++|..
T Consensus       437 dP~kR~ta~e~L~Hpf  452 (566)
T PLN03225        437 KGRQRISAKAALAHPY  452 (566)
T ss_pred             CcccCCCHHHHhCCcC
Confidence            9999999999999754


No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97  E-value=3.4e-29  Score=203.86  Aligned_cols=176  Identities=35%  Similarity=0.549  Sum_probs=155.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++.++.++|++|+++++++......++++|++.+++|.+++......+++..++.++.+++.+|.+||+.+   ++
T Consensus        38 ~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~  114 (215)
T cd00180          38 LLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG---II  114 (215)
T ss_pred             HHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            679999999999999999999999989999999999989999998765456899999999999999999999998   99


Q ss_pred             eccCCCCCeEEcC-CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC-CCCchhHHHHHHHHHHHHHhCCC
Q 021891           82 YRDFKTSNILLDA-DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGRR  159 (306)
Q Consensus        82 H~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg~~  159 (306)
                      |+||+|.||+++. ++.++|+|||.+........  ......+...|++||..... .++.++|+|++|+++++|     
T Consensus       115 H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----  187 (215)
T cd00180         115 HRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----  187 (215)
T ss_pred             ccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----
Confidence            9999999999999 89999999999987544321  12234567889999998876 888999999999999999     


Q ss_pred             CCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          160 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       160 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                                                                  ..+.+++.+|++.||++||++.++++++
T Consensus       188 --------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 --------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             --------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                                        2566999999999999999999998754


No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96  E-value=3.3e-29  Score=226.73  Aligned_cols=214  Identities=20%  Similarity=0.266  Sum_probs=149.3

Q ss_pred             HHHHHHhcCCCCcc-----cceeeEEEe--------CCeeEEEEEcCCCCCHHHHhhcCC--------------------
Q 021891            4 AEVNFLGDLVHLNL-----VKLIGYCIE--------DDQRLLVYEFMPRGSLENHLFRRS--------------------   50 (306)
Q Consensus         4 ~E~~il~~l~H~ni-----v~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~~~--------------------   50 (306)
                      .|+.++.+++|.++     ++++++|..        .+..++||||+++++|.+++....                    
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            46777778876654     677777653        356899999999999999885321                    


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccc
Q 021891           51 ---LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY  127 (306)
Q Consensus        51 ---~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y  127 (306)
                         ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++........ ......+++.|
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y  376 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRY  376 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcce
Confidence               12456788899999999999999988   999999999999999999999999999764332211 11123347899


Q ss_pred             cCCcchhcCC--------------------C--CchhHHHHHHHHHHHHHhCCC-CCCCCCCCCC------cchHHhhhh
Q 021891          128 AAPEYVMTGH--------------------L--TSRSDVYSFGVVLLEMLTGRR-SMDKNRPNGE------HNLVEWARP  178 (306)
Q Consensus       128 ~aPE~~~~~~--------------------~--~~~~DiwslG~il~elltg~~-pf~~~~~~~~------~~~~~~~~~  178 (306)
                      +|||.+....                    |  ..+.||||+||++|+|++|.. ||........      .....|...
T Consensus       377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~  456 (507)
T PLN03224        377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY  456 (507)
T ss_pred             eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence            9999875322                    1  235799999999999999875 6643221110      001111110


Q ss_pred             hhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCC---CCCCCHHHHHHHhC
Q 021891          179 HLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP---KARPLMSEVVEALK  232 (306)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rps~~ell~~l~  232 (306)
                      . ..      ..+-    ......+....+|+.+||..+|   .+|+|+.|+++|..
T Consensus       457 ~-~~------~~~~----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~  502 (507)
T PLN03224        457 K-GQ------KYDF----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF  502 (507)
T ss_pred             c-cc------CCCc----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence            0 00      0000    0112235788999999999876   68999999999754


No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96  E-value=5.7e-31  Score=233.40  Aligned_cols=210  Identities=24%  Similarity=0.347  Sum_probs=169.6

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      .++|+-+++..+|||||.|++.+...+.+++.||||.||+|.+.. .-..++++.++...++..+.||.|||+.+   -+
T Consensus        59 iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy-~~TgplselqiayvcRetl~gl~ylhs~g---k~  134 (829)
T KOG0576|consen   59 IQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIY-HVTGPLSELQIAYVCRETLQGLKYLHSQG---KI  134 (829)
T ss_pred             cccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccccee-eecccchhHHHHHHHhhhhccchhhhcCC---cc
Confidence            367888999999999999999999999999999999999999965 34458999999999999999999999999   89


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchh---cCCCCchhHHHHHHHHHHHHHhCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~  158 (306)
                      |||||-.||++++.|.+|++|||.+..+....  -....+.||+.|||||+..   .+.|..++|||++|+...|+--.+
T Consensus       135 hRdiKGanilltd~gDvklaDfgvsaqitati--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLq  212 (829)
T KOG0576|consen  135 HRDIKGANILLTDEGDVKLADFGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQ  212 (829)
T ss_pred             cccccccceeecccCceeecccCchhhhhhhh--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcC
Confidence            99999999999999999999999998765432  2345588999999999874   568999999999999999999888


Q ss_pred             CCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          159 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       159 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      +|.....+.....++.        .    ..+++....+ .-..++.+.+|++.+|.++|++|||++.++.|
T Consensus       213 pplfdlhpmr~l~LmT--------k----S~~qpp~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  213 PPLFDLHPMRALFLMT--------K----SGFQPPTLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             CcccccchHHHHHHhh--------c----cCCCCCcccC-CccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence            8866544332211111        0    1111111111 11235678899999999999999999998875


No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.6e-30  Score=205.81  Aligned_cols=211  Identities=25%  Similarity=0.358  Sum_probs=153.7

Q ss_pred             CHHHHHHHHhcC-CCCcccceeeE-EEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            1 MWQAEVNFLGDL-VHLNLVKLIGY-CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         1 ~~~~E~~il~~l-~H~niv~~~~~-~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +|.+|+.---.| .|.||+.-|++ |++.+.+++++||++.|+|...+...  .+-+..-..++.|+++|+.|+|+++  
T Consensus        66 dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fMHskn--  141 (378)
T KOG1345|consen   66 DFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFMHSKN--  141 (378)
T ss_pred             HHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHhhccc--
Confidence            477777766666 58899987764 67778888999999999999988654  4788888999999999999999999  


Q ss_pred             CeEeccCCCCCeEEcC--CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhc---C--CCCchhHHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDA--DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT---G--HLTSRSDVYSFGVVL  151 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~~DiwslG~il  151 (306)
                       +||||||.+||||-.  .-++||||||+.+.....     ......+..|.+||....   +  ...+.+|||.||+++
T Consensus       142 -lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~  215 (378)
T KOG1345|consen  142 -LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIF  215 (378)
T ss_pred             -hhhcccccceEEEecCCccEEEeeecccccccCce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeee
Confidence             999999999999932  347999999998864321     222234567999998753   2  346789999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHH
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR---PLMSEVV  228 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R---ps~~ell  228 (306)
                      |.++||..||+.....+. ....|..  +..+.      .+.....+. ..++.+..+.++-|..++++|   .++....
T Consensus       216 f~cltG~~PWQka~~~d~-~Y~~~~~--w~~rk------~~~~P~~F~-~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  216 FYCLTGKFPWQKASIMDK-PYWEWEQ--WLKRK------NPALPKKFN-PFSEKALRLFKKSLTPRFKDRCKIWTAKKMR  285 (378)
T ss_pred             eeeecCCCcchhhhccCc-hHHHHHH--Hhccc------CccCchhhc-ccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence            999999999985544333 2222222  21111      112222221 235678899999999999999   4444444


Q ss_pred             HHh
Q 021891          229 EAL  231 (306)
Q Consensus       229 ~~l  231 (306)
                      ..+
T Consensus       286 k~~  288 (378)
T KOG1345|consen  286 KCL  288 (378)
T ss_pred             HHH
Confidence            433


No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96  E-value=1.1e-29  Score=221.95  Aligned_cols=151  Identities=25%  Similarity=0.359  Sum_probs=134.4

Q ss_pred             HHHHHHhcCC---CCcccceeeEEEeCCeeEEEEEcCC-CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            4 AEVNFLGDLV---HLNLVKLIGYCIEDDQRLLVYEFMP-RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         4 ~E~~il~~l~---H~niv~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      .|++||..|+   |+||++++++|++++.+||+||--. |-+|.++|..+ ..+++..+..|++||+.|+++||+.+   
T Consensus       615 ~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~~---  690 (772)
T KOG1152|consen  615 SEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQG---  690 (772)
T ss_pred             hhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhccccccccC---
Confidence            5999999997   9999999999999999999999753 34999999554 47999999999999999999999999   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCC-CchhHHHHHHHHHHHHHhCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL-TSRSDVYSFGVVLLEMLTGR  158 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~  158 (306)
                      |||||||-+||.++.+|.+||+|||.+.....+    .-..++||..|.|||++.|..| ...-|||+||+++|-++...
T Consensus       691 ivhrdikdenvivd~~g~~klidfgsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyke  766 (772)
T KOG1152|consen  691 IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKE  766 (772)
T ss_pred             ceecccccccEEEecCCeEEEeeccchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEecc
Confidence            999999999999999999999999999875333    2345789999999999999888 55689999999999999888


Q ss_pred             CCCC
Q 021891          159 RSMD  162 (306)
Q Consensus       159 ~pf~  162 (306)
                      .||.
T Consensus       767 npyy  770 (772)
T KOG1152|consen  767 NPYY  770 (772)
T ss_pred             CCCc
Confidence            8875


No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94  E-value=1.4e-26  Score=191.00  Aligned_cols=158  Identities=31%  Similarity=0.380  Sum_probs=138.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++.++.++|+|++++++++......++++|++++++|.+++......+++..+..++.+++.++.+||+.+   ++
T Consensus        44 ~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~  120 (225)
T smart00221       44 FLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IV  120 (225)
T ss_pred             HHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence            678999999999999999999999999999999999999999998665433899999999999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcch-hcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-MTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+|.||+++.++.++|+|||.+........ .......++..|++||.+ ....++.++|+|+||+++++|++|+.|
T Consensus       121 h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~p  199 (225)
T smart00221      121 HRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEP  199 (225)
T ss_pred             cCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            999999999999999999999999987654320 012334677889999998 666788899999999999999999999


Q ss_pred             CCC
Q 021891          161 MDK  163 (306)
Q Consensus       161 f~~  163 (306)
                      |..
T Consensus       200 f~~  202 (225)
T smart00221      200 FSG  202 (225)
T ss_pred             ccc
Confidence            965


No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94  E-value=7.1e-27  Score=197.86  Aligned_cols=223  Identities=24%  Similarity=0.281  Sum_probs=162.0

Q ss_pred             HHHHHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      ..+|+++|..+ -+.||+++.+++..++..++|+||++.....++..    .++...+..+++.++.||.++|.+|   |
T Consensus        81 i~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~G---I  153 (418)
T KOG1167|consen   81 ILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNG---I  153 (418)
T ss_pred             HHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccC---c
Confidence            36899999999 68999999999999999999999999999988873    4678899999999999999999999   9


Q ss_pred             EeccCCCCCeEEcC-CCcEEEeccCCcccCCCC------------------------------------------Cccee
Q 021891           81 IYRDFKTSNILLDA-DYNAKLSDFGLAKDGPEG------------------------------------------DKTHV  117 (306)
Q Consensus        81 iH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~------------------------------------------~~~~~  117 (306)
                      |||||||+|++.+. .+.-.|.|||+|......                                          .....
T Consensus       154 vHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~  233 (418)
T KOG1167|consen  154 VHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSE  233 (418)
T ss_pred             cccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccce
Confidence            99999999999975 467789999998721100                                          00000


Q ss_pred             eecccccccccCCcchhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCC-cchHH---------hhhhhhcc----
Q 021891          118 STRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE-HNLVE---------WARPHLGE----  182 (306)
Q Consensus       118 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~---------~~~~~~~~----  182 (306)
                      .-...||++|+|||++.. ...+.++||||.|+|+.-++++..||........ ...+.         ......+.    
T Consensus       234 ~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~  313 (418)
T KOG1167|consen  234 RANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLW  313 (418)
T ss_pred             ecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeee
Confidence            112569999999999974 5678999999999999999999999876433211 10000         00000000    


Q ss_pred             ----------c-cccccc----cCC-----ccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          183 ----------R-RRFYRL----IDP-----RLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       183 ----------~-~~~~~~----~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                                . ..+...    +.+     ..........+..+++|+.+||+.||.+|.|+++.|+|.
T Consensus       314 ~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp  382 (418)
T KOG1167|consen  314 QKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP  382 (418)
T ss_pred             ccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence                      0 000000    101     011111222345789999999999999999999999864


No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93  E-value=3.3e-27  Score=218.07  Aligned_cols=213  Identities=20%  Similarity=0.210  Sum_probs=166.6

Q ss_pred             HHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR   83 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~   83 (306)
                      .|+-+-..|+|+|++..+..+.+.....-+||||++ +|..++... ..+....+-.++.|++.||.|+|+.|   +.||
T Consensus       370 sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahr  444 (601)
T KOG0590|consen  370 SEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMG---LAHR  444 (601)
T ss_pred             hheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcC---ceec
Confidence            355566678999999888877776666666999999 999998665 36888899999999999999999999   9999


Q ss_pred             cCCCCCeEEcCCCcEEEeccCCcccCCCCCcc--eeeecccccccccCCcchhcCCCCc-hhHHHHHHHHHHHHHhCCCC
Q 021891           84 DFKTSNILLDADYNAKLSDFGLAKDGPEGDKT--HVSTRVMGTYGYAAPEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        84 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~elltg~~p  160 (306)
                      |||++|+++..+|.+||+|||.+.........  ......+|+..|+|||++.+..|++ ..||||.|++++.|.+|+.|
T Consensus       445 dlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~  524 (601)
T KOG0590|consen  445 DLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFP  524 (601)
T ss_pred             cCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCc
Confidence            99999999999999999999999876544333  4556688999999999999999976 69999999999999999999


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      |......+......       ....  ..-...-........+...+.+|.+||+.||.+|.|+++|++.
T Consensus       525 Wk~a~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  525 WKVAKKSDNSFKTN-------NYSD--QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             cccccccccchhhh-------cccc--ccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence            97654443321000       0000  0000001112334456788899999999999999999999984


No 407
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.91  E-value=7.7e-24  Score=187.74  Aligned_cols=218  Identities=25%  Similarity=0.397  Sum_probs=167.9

Q ss_pred             HhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe-EeccCCC
Q 021891            9 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV-IYRDFKT   87 (306)
Q Consensus         9 l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i-iH~dlkp   87 (306)
                      |+++.|.|+.+++|.+.++...++|.+||..|+|.|.+......+++.....++++|+.||.|||+..   | .|+.|+.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP---IGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc---ceeeeeecc
Confidence            56889999999999999999999999999999999999888888999999999999999999999866   4 9999999


Q ss_pred             CCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcC---C----CCchhHHHHHHHHHHHHHhCCCC
Q 021891           88 SNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG---H----LTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        88 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~----~~~~~DiwslG~il~elltg~~p  160 (306)
                      .|++++....+||+|||+.................-..-|.|||.+.+.   .    .+.+.||||+|++++|+++.+.|
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            9999999999999999998776431111111222235569999999753   1    46679999999999999999999


Q ss_pred             CCCCCCCCCc-chHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCCCCC
Q 021891          161 MDKNRPNGEH-NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNL  237 (306)
Q Consensus       161 f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  237 (306)
                      |......... ..+.....      .....+.|.+....  +...++..++..||..+|.+||+++++-..++.+...
T Consensus       158 ~~~~~~~~~~~eii~~~~~------~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKK------GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             cccccccCChHHHHHHHHh------cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            9875443332 22222111      01112222222111  3344789999999999999999999999988766553


No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90  E-value=1.6e-22  Score=175.65  Aligned_cols=220  Identities=31%  Similarity=0.427  Sum_probs=167.3

Q ss_pred             HHHHHHHHhcCCCC-cccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            2 WQAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~-niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      |.+|+.+++.+.|+ +|+++++++......+++++++.+++|.+++....  ..+....+..++.|++.++.|+|+.+  
T Consensus        44 ~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--  121 (384)
T COG0515          44 FLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--  121 (384)
T ss_pred             HHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            67899999999988 79999999977777899999999999997775544  26899999999999999999999999  


Q ss_pred             CeEeccCCCCCeEEcCCC-cEEEeccCCcccCCCCCcce----eeecccccccccCCcchhc---CCCCchhHHHHHHHH
Q 021891           79 PVIYRDFKTSNILLDADY-NAKLSDFGLAKDGPEGDKTH----VSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVV  150 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~i  150 (306)
                       ++|||+||+||+++..+ .++++|||.++.........    ......|+..|+|||.+.+   ..++...|+|++|++
T Consensus       122 -~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~  200 (384)
T COG0515         122 -IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGIT  200 (384)
T ss_pred             -eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHH
Confidence             99999999999999988 79999999998654433221    2355789999999999987   578999999999999


Q ss_pred             HHHHHhCCCCCCCCCCC-CCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          151 LLEMLTGRRSMDKNRPN-GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       151 l~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      ++++++|..||...... .............   ..   .................+.+++..|+..+|..|.+..+...
T Consensus       201 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         201 LYELLTGLPPFEGEKNSSATSQTLKIILELP---TP---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             HHHHHhCCCCCCCCCccccHHHHHHHHHhcC---Cc---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            99999999997654431 0011111111000   00   00000110000122357889999999999999998888776


Q ss_pred             H
Q 021891          230 A  230 (306)
Q Consensus       230 ~  230 (306)
                      .
T Consensus       275 ~  275 (384)
T COG0515         275 H  275 (384)
T ss_pred             c
Confidence            4


No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90  E-value=3.9e-24  Score=172.16  Aligned_cols=208  Identities=22%  Similarity=0.347  Sum_probs=161.2

Q ss_pred             CHHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +|..|.--|+.+.||||+.+++.|....++.++..||+.|||...+.+.. ...+..++.+++.+++.|++|||+..+ -
T Consensus       233 dfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep-~  311 (448)
T KOG0195|consen  233 DFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEP-M  311 (448)
T ss_pred             hhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcch-h
Confidence            47778888888999999999999999999999999999999999997653 347888999999999999999999873 2


Q ss_pred             eEeccCCCCCeEEcCCCcEEEe--ccCCcccCCCCCcceeeecccccccccCCcchhcCCC---CchhHHHHHHHHHHHH
Q 021891           80 VIYRDFKTSNILLDADYNAKLS--DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL---TSRSDVYSFGVVLLEM  154 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslG~il~el  154 (306)
                      |..-.|....++||++.+.+|.  |--.+..         .....-.+.||+||.++..+-   -.++|+|||++++|||
T Consensus       312 ipr~~lns~hvmidedltarismad~kfsfq---------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel  382 (448)
T KOG0195|consen  312 IPRFYLNSKHVMIDEDLTARISMADTKFSFQ---------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWEL  382 (448)
T ss_pred             hhhhhcccceEEecchhhhheecccceeeee---------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHh
Confidence            4445688999999998777663  3222111         122334778999999986543   3589999999999999


Q ss_pred             HhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhCCC
Q 021891          155 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL  234 (306)
Q Consensus       155 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  234 (306)
                      .|...||....+.+.--.+.                -..+.-.++...+..+.+|+.-|+..||.+||.+..++-.|+.+
T Consensus       383 ~trevpfadlspmecgmkia----------------leglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  383 NTREVPFADLSPMECGMKIA----------------LEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             hccccccccCCchhhhhhhh----------------hccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            99999998876654322211                01112223444567889999999999999999999998877654


No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90  E-value=1.3e-22  Score=176.54  Aligned_cols=215  Identities=23%  Similarity=0.238  Sum_probs=164.6

Q ss_pred             HHHHHHHHhcCCC----CcccceeeEE-EeCCeeEEEEEcCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            2 WQAEVNFLGDLVH----LNLVKLIGYC-IEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         2 ~~~E~~il~~l~H----~niv~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      ++.|..++..+..    +++..+++.+ ..+...|+||+.+ |.+|.++..... +.++..++..++.|++.+|++||+.
T Consensus        63 l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   63 LKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             chhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            6789999999973    6899999999 4777889999999 789999886554 7899999999999999999999999


Q ss_pred             CCCCeEeccCCCCCeEEcCC-----CcEEEeccCCcc--cCCCCCcc---ee---eecccccccccCCcchhcCCCCchh
Q 021891           76 AERPVIYRDFKTSNILLDAD-----YNAKLSDFGLAK--DGPEGDKT---HV---STRVMGTYGYAAPEYVMTGHLTSRS  142 (306)
Q Consensus        76 ~~~~iiH~dlkp~Nill~~~-----~~~kl~Dfg~a~--~~~~~~~~---~~---~~~~~gt~~y~aPE~~~~~~~~~~~  142 (306)
                      |   ++||||||+|+.+...     ..+.|.|||+++  .+......   ..   ...+.||..|+++.++.+...+.+.
T Consensus       142 G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~D  218 (322)
T KOG1164|consen  142 G---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRD  218 (322)
T ss_pred             C---cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCch
Confidence            9   9999999999999765     468999999999  43222211   11   1235699999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCC
Q 021891          143 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP  222 (306)
Q Consensus       143 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (306)
                      |+||++.++.+++.|..||..................        .....     +....+..+.++...+-..+..++|
T Consensus       219 Dles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~P  285 (322)
T KOG1164|consen  219 DLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK--------LLTDR-----FGDLKPEEFAKILEYIDSLDYEDKP  285 (322)
T ss_pred             hhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh--------hcccc-----ccCCChHHHHHHHHHhhccCCcCCC
Confidence            9999999999999999999665433221111110000        00000     1112245677777777789999999


Q ss_pred             CHHHHHHHhCC
Q 021891          223 LMSEVVEALKP  233 (306)
Q Consensus       223 s~~ell~~l~~  233 (306)
                      ....+...++.
T Consensus       286 dy~~~~~~l~~  296 (322)
T KOG1164|consen  286 DYEKLAELLKD  296 (322)
T ss_pred             CHHHHHHHHHH
Confidence            99999887653


No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88  E-value=3.3e-22  Score=165.10  Aligned_cols=217  Identities=18%  Similarity=0.201  Sum_probs=172.4

Q ss_pred             CHHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +++.|.+..+.|. .++|..+|-+...+.+-.||+|++ |.||.|++.-.++.|+..++..++.|++.-++|+|++.   
T Consensus        69 QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---  144 (449)
T KOG1165|consen   69 QLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---  144 (449)
T ss_pred             hHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---
Confidence            4788999999995 589999998888888888999999 78999999888889999999999999999999999999   


Q ss_pred             eEeccCCCCCeEEcCC-----CcEEEeccCCcccCCCCCcce-----eeecccccccccCCcchhcCCCCchhHHHHHHH
Q 021891           80 VIYRDFKTSNILLDAD-----YNAKLSDFGLAKDGPEGDKTH-----VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV  149 (306)
Q Consensus        80 iiH~dlkp~Nill~~~-----~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  149 (306)
                      +|+|||||+|+||...     ..+.|+|||+|+.+.+..+..     ......||.+||+-..+.+.+.+...|+-|||-
T Consensus       145 LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGH  224 (449)
T KOG1165|consen  145 LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGH  224 (449)
T ss_pred             eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhh
Confidence            9999999999999643     458999999999887654332     234567999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 021891          150 VLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE  229 (306)
Q Consensus       150 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~  229 (306)
                      ++++.+-|..||++..........+    .+++.++..      -...+....+.++...+...-..+..+-|..+-+..
T Consensus       225 vFmYFLRGsLPWQGLKA~tnK~kYe----KIGe~Kr~T------~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~  294 (449)
T KOG1165|consen  225 VFMYFLRGSLPWQGLKADTNKEKYE----KIGETKRST------PIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRK  294 (449)
T ss_pred             hhhhhccCCCccccccCcchHHHHH----HhccccccC------CHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            9999999999999876554433222    222222110      011122234677888888888888888898776655


Q ss_pred             Hh
Q 021891          230 AL  231 (306)
Q Consensus       230 ~l  231 (306)
                      .+
T Consensus       295 Lf  296 (449)
T KOG1165|consen  295 LF  296 (449)
T ss_pred             HH
Confidence            43


No 412
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87  E-value=1.3e-21  Score=165.34  Aligned_cols=197  Identities=21%  Similarity=0.257  Sum_probs=140.3

Q ss_pred             CCCcccceeeEEEeC---------------------------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHH
Q 021891           13 VHLNLVKLIGYCIED---------------------------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA   65 (306)
Q Consensus        13 ~H~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi   65 (306)
                      +|||||++.++|.+.                           ..+|+||.-.. .+|..++..+.  .+.....-++.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHH
Confidence            799999999887642                           36789999885 59999996654  5667778899999


Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEc--CCC--cEEEeccCCcccCCCCCc--c--eeeecccccccccCCcchhcCC
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLD--ADY--NAKLSDFGLAKDGPEGDK--T--HVSTRVMGTYGYAAPEYVMTGH  137 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~--~~~--~~kl~Dfg~a~~~~~~~~--~--~~~~~~~gt~~y~aPE~~~~~~  137 (306)
                      ++|+.|||.++   |.|||||.+|||+.  +++  .+.|+|||.+-......-  .  ......-|...-||||+....+
T Consensus       351 LEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P  427 (598)
T KOG4158|consen  351 LEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP  427 (598)
T ss_pred             HHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence            99999999999   99999999999993  333  478999997643221100  0  0011234566789999986321


Q ss_pred             ------CCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHH
Q 021891          138 ------LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA  211 (306)
Q Consensus       138 ------~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  211 (306)
                            --.|+|.|+.|.+.||+++...||.+..... .....+....           -|    .++..++..+.+|+.
T Consensus       428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L~~r~Yqe~q-----------LP----alp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-LDTRTYQESQ-----------LP----ALPSRVPPVARQLVF  491 (598)
T ss_pred             CCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-echhhhhhhh-----------CC----CCcccCChHHHHHHH
Confidence                  1358999999999999999999998732211 1111111111           11    234455678899999


Q ss_pred             HcccCCCCCCCCHHHHHHHh
Q 021891          212 HCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       212 ~~l~~~p~~Rps~~ell~~l  231 (306)
                      .+|+.||.+|++..=....|
T Consensus       492 ~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHhcCCccccCCccHHHhHH
Confidence            99999999999876555544


No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86  E-value=9.7e-23  Score=190.36  Aligned_cols=208  Identities=22%  Similarity=0.266  Sum_probs=149.7

Q ss_pred             HHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 021891            5 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD   84 (306)
Q Consensus         5 E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~d   84 (306)
                      |++ ...++|||++.+.-+...++..|||-+|.. .+|.|.+..+. .+...+.+.|+.|++.||..+|+.|   |+|+|
T Consensus        72 ~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk-hnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~g---VcHGD  145 (1431)
T KOG1240|consen   72 EIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK-HNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLG---VCHGD  145 (1431)
T ss_pred             HHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh-hhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcC---ccccc
Confidence            344 445699999999998888889999999995 49999997664 5777888899999999999999999   99999


Q ss_pred             CCCCCeEEcCCCcEEEeccCCcccC-CCCCcce----eeecccccccccCCcchhcC----------C-CCchhHHHHHH
Q 021891           85 FKTSNILLDADYNAKLSDFGLAKDG-PEGDKTH----VSTRVMGTYGYAAPEYVMTG----------H-LTSRSDVYSFG  148 (306)
Q Consensus        85 lkp~Nill~~~~~~kl~Dfg~a~~~-~~~~~~~----~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwslG  148 (306)
                      ||.+||||+.-+.+.|+||..-+.. .+.+...    --..-..-.+|.|||-+...          . .+++-||||+|
T Consensus       146 IKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~G  225 (1431)
T KOG1240|consen  146 IKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAG  225 (1431)
T ss_pred             cccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhh
Confidence            9999999999999999999876532 1111111    01111122369999987531          2 56789999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          149 VVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       149 ~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                      |+++||++ |+++|.-.      ++..+............+.+           ....++.||..|++.||.+|.|+++.
T Consensus       226 CViaELf~Eg~PlF~LS------QL~aYr~~~~~~~e~~Le~I-----------ed~~~Rnlil~Mi~rdPs~RlSAedy  288 (1431)
T KOG1240|consen  226 CVIAELFLEGRPLFTLS------QLLAYRSGNADDPEQLLEKI-----------EDVSLRNLILSMIQRDPSKRLSAEDY  288 (1431)
T ss_pred             HHHHHHHhcCCCcccHH------HHHhHhccCccCHHHHHHhC-----------cCccHHHHHHHHHccCchhccCHHHH
Confidence            99999988 57777521      12222221111111111111           12367799999999999999999999


Q ss_pred             HHHhCCCC
Q 021891          228 VEALKPLP  235 (306)
Q Consensus       228 l~~l~~~~  235 (306)
                      |+.-.+..
T Consensus       289 L~~yrG~~  296 (1431)
T KOG1240|consen  289 LQKYRGLV  296 (1431)
T ss_pred             HHhhhccc
Confidence            99765544


No 414
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.86  E-value=6.6e-23  Score=178.94  Aligned_cols=173  Identities=25%  Similarity=0.404  Sum_probs=130.5

Q ss_pred             eeEEEEEcCCCCCHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCc
Q 021891           29 QRLLVYEFMPRGSLENHLFRR--SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA  106 (306)
Q Consensus        29 ~~~lv~e~~~~~sL~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  106 (306)
                      .+||.|++|...+|.+.|.++  ....++.....++.|++.|+.|   ++   .+|+|+||.||+...+..+||+|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence            578999999999999999644  3457888899999999999999   56   999999999999999999999999999


Q ss_pred             ccCCCCC----cceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhc
Q 021891          107 KDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLG  181 (306)
Q Consensus       107 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~  181 (306)
                      .......    .....+...||.+||+||.+.+..|+.|+||||||+|++|++. -...|.......          .+.
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~----------d~r  473 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLT----------DIR  473 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhh----------hhh
Confidence            8765543    1223445789999999999999999999999999999999998 233222110000          000


Q ss_pred             cccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 021891          182 ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEV  227 (306)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el  227 (306)
                           ...+++....++     ..-..|+.+++...|.+||++.+.
T Consensus       474 -----~g~ip~~~~~d~-----p~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  474 -----DGIIPPEFLQDY-----PEEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             -----cCCCChHHhhcC-----cHHHHHHHHhcCCCcccCchHHHH
Confidence                 011222222222     234589999999999999955444


No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86  E-value=1.4e-21  Score=154.87  Aligned_cols=218  Identities=19%  Similarity=0.161  Sum_probs=170.5

Q ss_pred             CHHHHHHHHhcCCC-CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            1 MWQAEVNFLGDLVH-LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         1 ~~~~E~~il~~l~H-~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      ++..|.++.+.|++ ..|..+..+..+...-.+||+++ |.||.+++.-..+.++..++.-++-|++.-++|+|.++   
T Consensus        56 qL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---  131 (341)
T KOG1163|consen   56 QLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---  131 (341)
T ss_pred             chhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---
Confidence            35678999999976 57778888888888889999999 78999988666778999999999999999999999999   


Q ss_pred             eEeccCCCCCeEEcCC---CcEEEeccCCcccCCCCCcc-----eeeecccccccccCCcchhcCCCCchhHHHHHHHHH
Q 021891           80 VIYRDFKTSNILLDAD---YNAKLSDFGLAKDGPEGDKT-----HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL  151 (306)
Q Consensus        80 iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  151 (306)
                      ++||||||+|+|..-+   ..+.++|||+|+.+.+....     .......||..|.+-....+.+.+...|+-|+|.++
T Consensus       132 fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvL  211 (341)
T KOG1163|consen  132 FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVL  211 (341)
T ss_pred             cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhccee
Confidence            9999999999999644   46899999999887554322     223446899999999888888899999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      .++.-|..||++.......+..+.......          ....+.+....|.++.-.+..|-..--++-|...-+.+..
T Consensus       212 mYfnrG~LPWQglka~tk~QKyEkI~EkK~----------s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF  281 (341)
T KOG1163|consen  212 MYFNRGSLPWQGLKAATKKQKYEKISEKKM----------STPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF  281 (341)
T ss_pred             eeeecCCCcccccchhhHHHHHHHHHHhhc----------CCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence            999999999998876655444332221100          0001112223356788899999999999999877766654


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      .
T Consensus       282 r  282 (341)
T KOG1163|consen  282 R  282 (341)
T ss_pred             H
Confidence            4


No 416
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85  E-value=1.3e-21  Score=173.97  Aligned_cols=188  Identities=29%  Similarity=0.363  Sum_probs=156.8

Q ss_pred             HHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            3 QAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      ..|..++..++ ||.+|++.-.++.+...++++++..+|.|...+.+.. .+.+..+..+...++.+++++|+.+   ++
T Consensus        44 ~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l~---ii  119 (612)
T KOG0603|consen   44 KQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKLG---IA  119 (612)
T ss_pred             ccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchhH---HH
Confidence            35778888886 9999999999999999999999999999998885554 6788888889999999999999999   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM  161 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  161 (306)
                      |||+|++||+++.+|++++.|||+++........      +||..|||||++.  .....+|.||||+++|||+||-.||
T Consensus       120 yrd~k~enilld~~Ghi~~tdfglske~v~~~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf  191 (612)
T KOG0603|consen  120 YRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPF  191 (612)
T ss_pred             HhcccccceeecccCccccCCchhhhHhHhhhhc------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCC
Confidence            9999999999999999999999999875443221      8999999999997  5688999999999999999999999


Q ss_pred             CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 021891          162 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM  224 (306)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (306)
                      ...       ...             .+..  ..-.++...+..+.+++..++..+|.+|...
T Consensus       192 ~~~-------~~~-------------~Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  192 GGD-------TMK-------------RILK--AELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             chH-------HHH-------------HHhh--hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            761       110             0000  1112455667788999999999999999744


No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84  E-value=2.1e-20  Score=148.84  Aligned_cols=149  Identities=19%  Similarity=0.147  Sum_probs=113.9

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |++|+++|++|. |++|++++++    +..+++|||+.|.+|...+..       . ...++.|++.+|.++|+.|   |
T Consensus        48 ~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~-------~-~~~~~~qi~~~L~~lH~~G---I  112 (218)
T PRK12274         48 ARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR-------G-DLAYFRAARRLLQQLHRCG---V  112 (218)
T ss_pred             HHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh-------h-hHHHHHHHHHHHHHHHHCc---C
Confidence            689999999995 5889999986    356999999999998764311       1 1357889999999999999   9


Q ss_pred             EeccC-CCCCeEEcCCCcEEEeccCCcccCCCCCcc---ee--------eecccccccccCCcchhcC-CCC-chhHHHH
Q 021891           81 IYRDF-KTSNILLDADYNAKLSDFGLAKDGPEGDKT---HV--------STRVMGTYGYAAPEYVMTG-HLT-SRSDVYS  146 (306)
Q Consensus        81 iH~dl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---~~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~Diws  146 (306)
                      +|||| ||+||+++.+|.++|+|||++.........   ..        ......++.|+.|+..... ..+ ...+.++
T Consensus       113 vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~  192 (218)
T PRK12274        113 AHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFA  192 (218)
T ss_pred             ccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHH
Confidence            99999 799999999999999999999865433210   00        1112357778888765432 334 5678889


Q ss_pred             HHHHHHHHHhCCCCCCCCC
Q 021891          147 FGVVLLEMLTGRRSMDKNR  165 (306)
Q Consensus       147 lG~il~elltg~~pf~~~~  165 (306)
                      .|+.+|.++|+..++....
T Consensus       193 ~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        193 TGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             hcchHHHHHhccCCccccC
Confidence            9999999999998765443


No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.84  E-value=7.7e-21  Score=165.57  Aligned_cols=119  Identities=19%  Similarity=0.135  Sum_probs=94.4

Q ss_pred             HHHHHHHHhcCCCCcccc-eeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLVK-LIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~-~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |++|+++|++|+|+||+. ++++    +..|+|||||+|++|.. +...    .   ...++.|++.||.|||+.+   |
T Consensus        68 ~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~-~~~~----~---~~~~~~~i~~aL~~lH~~g---I  132 (365)
T PRK09188         68 AAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVPLHL-ARPH----G---DPAWFRSAHRALRDLHRAG---I  132 (365)
T ss_pred             HHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCCHHH-hCcc----c---hHHHHHHHHHHHHHHHHCC---C
Confidence            789999999999999985 5442    46799999999999973 2111    1   1467899999999999988   9


Q ss_pred             EeccC-CCCCeEEcCCCcEEEeccCCcccCCCCCccee------eecccccccccCCcchhc
Q 021891           81 IYRDF-KTSNILLDADYNAKLSDFGLAKDGPEGDKTHV------STRVMGTYGYAAPEYVMT  135 (306)
Q Consensus        81 iH~dl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~  135 (306)
                      +|||| ||+|||++.++.+||+|||+++.+........      .....++..|+|||.+..
T Consensus       133 iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        133 THNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             eeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            99999 99999999999999999999987654321111      134567888999999863


No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81  E-value=2.4e-20  Score=151.54  Aligned_cols=128  Identities=10%  Similarity=0.179  Sum_probs=101.5

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeC--------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIED--------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~--------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      |++|++.+.+|.|++|..+.+++...        +..++||||++|.+|.+..     .+++    ....+++.+|..+|
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH  152 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLH  152 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHH
Confidence            68999999999999999999986643        3478999999999998863     2333    24569999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHH
Q 021891           74 EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE  153 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  153 (306)
                      ..+   ++|||+||+||+++.+| ++|+|||............              .++....|+.++|+|+||+.+..
T Consensus       153 ~~g---i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~di~~lg~~~~~  214 (232)
T PRK10359        153 QHG---MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNEIKDLGYYLLI  214 (232)
T ss_pred             HcC---CccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH--------------HHHHHhHhcccccccceeEeehH
Confidence            999   99999999999999988 9999999887643211100              03345567789999999999876


Q ss_pred             HHh
Q 021891          154 MLT  156 (306)
Q Consensus       154 llt  156 (306)
                      +..
T Consensus       215 ~~~  217 (232)
T PRK10359        215 YKK  217 (232)
T ss_pred             HHH
Confidence            653


No 420
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81  E-value=7.4e-20  Score=153.09  Aligned_cols=161  Identities=22%  Similarity=0.321  Sum_probs=108.2

Q ss_pred             eEEEEEcCCCCCHHHHhhc---CCC---CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEecc
Q 021891           30 RLLVYEFMPRGSLENHLFR---RSL---PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDF  103 (306)
Q Consensus        30 ~~lv~e~~~~~sL~~~l~~---~~~---~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  103 (306)
                      .+++|+-+. ++|.+++..   ...   .+....+..+..|++..+++||+.|   ++|+||+|+|++++.+|.++|+||
T Consensus       114 ~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G~v~Lg~F  189 (288)
T PF14531_consen  114 RFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDGGVFLGDF  189 (288)
T ss_dssp             EEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS-EEE--G
T ss_pred             hhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCCCEEEcCh
Confidence            467888884 599887642   221   2334455677799999999999999   999999999999999999999999


Q ss_pred             CCcccCCCCCcceeeecccccccccCCcchhcC--------CCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHh
Q 021891          104 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG--------HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW  175 (306)
Q Consensus       104 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~  175 (306)
                      +.......    .... ...+..|.+||.....        .++.+.|.|+||+++|.|+++..||...........   
T Consensus       190 ~~~~r~g~----~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---  261 (288)
T PF14531_consen  190 SSLVRAGT----RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---  261 (288)
T ss_dssp             GGEEETTE----EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---
T ss_pred             HHHeecCc----eeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---
Confidence            98876432    1121 2345779999977532        478899999999999999999999986533222111   


Q ss_pred             hhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCC
Q 021891          176 ARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR  221 (306)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (306)
                                        ....+. ..++.+..||..+|+.||.+|
T Consensus       262 ------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 ------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             ------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             ------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence                              112234 668899999999999999988


No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.76  E-value=3.8e-18  Score=138.16  Aligned_cols=99  Identities=15%  Similarity=0.126  Sum_probs=80.7

Q ss_pred             HHHHHHHHhcC-----CCCcccceeeEEEeCC---eeE-EEEEc--CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHH-
Q 021891            2 WQAEVNFLGDL-----VHLNLVKLIGYCIEDD---QRL-LVYEF--MPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL-   69 (306)
Q Consensus         2 ~~~E~~il~~l-----~H~niv~~~~~~~~~~---~~~-lv~e~--~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l-   69 (306)
                      +.+|++++++|     +||||+++||+++++.   ..+ +|+||  +.+++|.+++.+.  .+++.  ..++.|++.++ 
T Consensus        43 ~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~  118 (210)
T PRK10345         43 IRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLK  118 (210)
T ss_pred             HHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHH
Confidence            67999999999     5799999999999874   333 78999  5578999999553  36655  35678888887 


Q ss_pred             HHhhcCCCCCeEeccCCCCCeEEcCC----CcEEEeccCCcc
Q 021891           70 AFLHEEAERPVIYRDFKTSNILLDAD----YNAKLSDFGLAK  107 (306)
Q Consensus        70 ~~LH~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~  107 (306)
                      +|||+++   |+||||||+||+++.+    +.++|+||+.+.
T Consensus       119 ~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        119 RYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             HHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            9999999   9999999999999743    479999965443


No 422
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.75  E-value=4.5e-18  Score=136.43  Aligned_cols=99  Identities=18%  Similarity=0.202  Sum_probs=80.5

Q ss_pred             HHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEe
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL-HEEAERPVIY   82 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~L-H~~~~~~iiH   82 (306)
                      +|+++|.+|.++++.....+.. . ..+|||||++|++|...+.+. ..++...+..++.|++.+|.++ |+.+   |+|
T Consensus        68 ~E~~~l~~l~~~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiH  141 (190)
T cd05147          68 KEMRNLKRLVTAGIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCR---LVH  141 (190)
T ss_pred             HHHHHHHHHHHCCCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence            4999999999888754443322 2 238999999988776554333 4689999999999999999999 6888   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      |||||+||+++ ++.++|+|||++...
T Consensus       142 rDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         142 ADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCCCHHHEEEE-CCcEEEEEccccccC
Confidence            99999999998 578999999999754


No 423
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.74  E-value=9.7e-19  Score=163.56  Aligned_cols=139  Identities=26%  Similarity=0.362  Sum_probs=107.4

Q ss_pred             HHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcc-------------eeeecccccccccCCcc
Q 021891           66 AKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKT-------------HVSTRVMGTYGYAAPEY  132 (306)
Q Consensus        66 ~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~  132 (306)
                      +.+++|||+.+   |+|||+||+|++|..-|++|++|||+++.......+             ....+.+||+.|+|||+
T Consensus       153 vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV  229 (1205)
T KOG0606|consen  153 VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV  229 (1205)
T ss_pred             hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence            67899999998   999999999999999999999999998753221111             11234689999999999


Q ss_pred             hhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHH
Q 021891          133 VMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH  212 (306)
Q Consensus       133 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  212 (306)
                      +....|...+|.|++|+|+||.+-|..||.+..+.+...........+.      +-         ....+.++.++|.+
T Consensus       230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp------E~---------dea~p~Ea~dli~~  294 (1205)
T KOG0606|consen  230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP------EE---------DEALPPEAQDLIEQ  294 (1205)
T ss_pred             hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc------cc---------CcCCCHHHHHHHHH
Confidence            9999999999999999999999999999998766543322211111111      11         11234688999999


Q ss_pred             cccCCCCCCC
Q 021891          213 CLSRDPKARP  222 (306)
Q Consensus       213 ~l~~~p~~Rp  222 (306)
                      +|+.+|..|-
T Consensus       295 LL~qnp~~Rl  304 (1205)
T KOG0606|consen  295 LLRQNPLCRL  304 (1205)
T ss_pred             HHHhChHhhc
Confidence            9999999995


No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.73  E-value=1.5e-17  Score=133.79  Aligned_cols=101  Identities=17%  Similarity=0.159  Sum_probs=82.2

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeE
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAERPVI   81 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~~ii   81 (306)
                      ++|++.+.++.|++|.....+...  ..++||||++|+++....... ..++...+..++.|++.+|.++|+ .+   |+
T Consensus        67 ~~E~~~l~~l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-~~~~~~~~~~i~~~l~~~l~~lH~~~g---iv  140 (190)
T cd05145          67 EKEFRNLKRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-VPLEEEEAEELYEQVVEQMRRLYQEAG---LV  140 (190)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhh-ccCCHHHHHHHHHHHHHHHHHHHHhCC---Ee
Confidence            578999999999988654444333  248999999887554432222 357888999999999999999999 88   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCcccCC
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKDGP  110 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~  110 (306)
                      ||||||+||+++ ++.++|+|||+++...
T Consensus       141 HrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         141 HGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             cCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            999999999998 8899999999998654


No 425
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72  E-value=6.4e-19  Score=163.27  Aligned_cols=210  Identities=28%  Similarity=0.319  Sum_probs=163.5

Q ss_pred             HHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCCCeE
Q 021891            5 EVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLH-EEAERPVI   81 (306)
Q Consensus         5 E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l-~~~~~~l~~~~~~~~~~qi~~~l~~LH-~~~~~~ii   81 (306)
                      |..+-+.+. |+|++.+++.....+..+++++|..|+++.+.+ .......+...+..++.|+..++.|+| ..+   +.
T Consensus        70 e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~  146 (601)
T KOG0590|consen   70 ETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VT  146 (601)
T ss_pred             cccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cc
Confidence            555556665 999999999999999999999999999999988 443336777888899999999999999 877   99


Q ss_pred             eccCCCCCeEEcCCC-cEEEeccCCcccCCC-CCcceeeecccc-cccccCCcchhcC-CCCchhHHHHHHHHHHHHHhC
Q 021891           82 YRDFKTSNILLDADY-NAKLSDFGLAKDGPE-GDKTHVSTRVMG-TYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        82 H~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwslG~il~elltg  157 (306)
                      ||||||+|.+++..+ .++++|||+|..+.. .+........+| ++.|+|||...+. ...+..|+||.|+++.-+++|
T Consensus       147 h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g  226 (601)
T KOG0590|consen  147 HRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTG  226 (601)
T ss_pred             cCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccC
Confidence            999999999999999 999999999998776 444444556778 9999999999875 457889999999999999999


Q ss_pred             CCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          158 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       158 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ..|+......... ...|....    ..+    .    ............+++.+++..+|..|.+.+++-..
T Consensus       227 ~~p~~~~~~~~~~-~~~~~~~~----~~~----~----~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  227 ELPWDFPSRKDGR-YSSWKSNK----GRF----T----QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             CCCcccccccccc-ceeecccc----ccc----c----cCccccCChhhhhcccccccCCchhcccccccccc
Confidence            9998765443311 01111100    000    0    01112234577899999999999999998888764


No 426
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.71  E-value=1.1e-17  Score=138.42  Aligned_cols=201  Identities=22%  Similarity=0.272  Sum_probs=141.4

Q ss_pred             HHhcCCCCcccceeeEEEeCC-----eeEEEEEcCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            8 FLGDLVHLNLVKLIGYCIEDD-----QRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         8 il~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      -|-++.|.|||+++.|+.+.+     ...+++||+..|+|..+|++   +.+.+....-.+|+-||+.||.|||+.. .+
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-Pp  198 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-PP  198 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-Cc
Confidence            455778999999999987654     46789999999999999965   3456777888899999999999999987 78


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCCC---CcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG---DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                      |+|+++..+.|++..+|-+|++- +........   ..........+.++|.+||.-.....+.++|||+||.+..+|..
T Consensus       199 iihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             cccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            99999999999999999999853 211111000   00011122356788999998766677889999999999999988


Q ss_pred             CCCCC-CCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          157 GRRSM-DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       157 g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      +..-- ...........+.....         .+-+.            .-++++.+|++..|..||++++++-|.
T Consensus       278 lEiq~tnseS~~~~ee~ia~~i~---------~len~------------lqr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  278 LEIQSTNSESKVEVEENIANVII---------GLENG------------LQRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             heeccCCCcceeehhhhhhhhee---------eccCc------------cccCcCcccccCCCCCCcchhhhhcCc
Confidence            76421 11111111111100000         00011            113688999999999999999999764


No 427
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68  E-value=2.3e-16  Score=149.85  Aligned_cols=149  Identities=19%  Similarity=0.178  Sum_probs=122.0

Q ss_pred             HHHhcCC---CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 021891            7 NFLGDLV---HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR   83 (306)
Q Consensus         7 ~il~~l~---H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~   83 (306)
                      +++.+|+   -+-|..+...+.-.+.-+||+||.+.|+|.+++- ..+.+++..++.+..|++..|+.||..+   |||+
T Consensus       743 q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHg  818 (974)
T KOG1166|consen  743 QVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHG  818 (974)
T ss_pred             HHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecc
Confidence            4555665   2345556666666788899999999999999984 5667999999999999999999999999   9999


Q ss_pred             cCCCCCeEEcC-------CCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           84 DFKTSNILLDA-------DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        84 dlkp~Nill~~-------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                      ||||+|++|..       .-.++|+|||.+-.+.--.....-...++|-.+-.+|+..|..++..+|.|.|+.+++-|++
T Consensus       819 DiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLF  898 (974)
T KOG1166|consen  819 DIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLF  898 (974)
T ss_pred             cCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHH
Confidence            99999999942       34589999999865432222223445678889999999999999999999999999999999


Q ss_pred             CCC
Q 021891          157 GRR  159 (306)
Q Consensus       157 g~~  159 (306)
                      |+.
T Consensus       899 G~y  901 (974)
T KOG1166|consen  899 GKY  901 (974)
T ss_pred             HHH
Confidence            964


No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.64  E-value=1.2e-15  Score=124.98  Aligned_cols=98  Identities=19%  Similarity=0.292  Sum_probs=87.1

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++..+.|++|.....++...+..++||||++|++|.+.+....    . .+..++.+++.+|.++|..+   ++
T Consensus        46 ~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~---i~  117 (211)
T PRK14879         46 TRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG---II  117 (211)
T ss_pred             HHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC---cc
Confidence            5689999999999999887777777888899999999999999885432    2 78899999999999999988   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      |+|++|.||+++ ++.++|+|||.+..
T Consensus       118 H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        118 HGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             cCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999999999 78899999999865


No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62  E-value=1.4e-15  Score=141.16  Aligned_cols=94  Identities=23%  Similarity=0.332  Sum_probs=85.2

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|+++++.++|++|+..+.++.+....++||||+++++|.+++.         ....++.+++.+|.+||+.+   ++
T Consensus       383 ~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g---ii  450 (535)
T PRK09605        383 TRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG---IV  450 (535)
T ss_pred             HHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC---Cc
Confidence            6789999999999999988887777778899999999999999884         35678999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ||||||+||++ .++.++|+|||+++.
T Consensus       451 HrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        451 HGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             cCCCChHHEEE-ECCcEEEEeCccccc
Confidence            99999999999 678899999999876


No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62  E-value=1.7e-15  Score=122.77  Aligned_cols=95  Identities=22%  Similarity=0.330  Sum_probs=81.7

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      +.+|++++..+.|+++.....++...+..++||||++|++|.+.+.....        .++.+++.+|.+||+.+   ++
T Consensus        44 ~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g---i~  112 (199)
T TIGR03724        44 TRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG---IV  112 (199)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC---ee
Confidence            46799999999998776655566667778999999999999998754321        78999999999999998   99


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      |+|++|+||+++ ++.++++|||++..
T Consensus       113 H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724       113 HGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             cCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999999999 88999999999875


No 431
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.60  E-value=4.8e-15  Score=123.13  Aligned_cols=99  Identities=24%  Similarity=0.199  Sum_probs=80.3

Q ss_pred             HHHHHHHHhcCCCCcc--cceeeEEEeCCe----eEEEEEcCCC-CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            2 WQAEVNFLGDLVHLNL--VKLIGYCIEDDQ----RLLVYEFMPR-GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         2 ~~~E~~il~~l~H~ni--v~~~~~~~~~~~----~~lv~e~~~~-~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      +++|++++.+|.|++|  ++.+++......    .++|||+++| .+|.+++...  .+++..    +.+|+.+|.+||.
T Consensus        87 ~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~~l~~lH~  160 (239)
T PRK01723         87 AFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQLIARFHD  160 (239)
T ss_pred             HHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHHHHHHHHH
Confidence            4679999999998875  677776544322    3599999997 6999887543  355443    5789999999999


Q ss_pred             CCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           75 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      .|   |+||||||+|||++.++.++|+|||.++..
T Consensus       161 ~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        161 AG---VYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             CC---CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            99   999999999999999999999999998763


No 432
>smart00090 RIO RIO-like kinase.
Probab=99.57  E-value=7.2e-15  Score=121.87  Aligned_cols=100  Identities=19%  Similarity=0.207  Sum_probs=78.8

Q ss_pred             HHHHHHHHhcCCCCc--ccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +++|+++++++.+.+  +.+++++   . ..++||||++|++|....... ..+....+..++.|++.+|.+||..+.  
T Consensus        97 ~~~E~~~L~~L~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~--  169 (237)
T smart00090       97 AEKEFRNLQRLYEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGE--  169 (237)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEe---c-CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCC--
Confidence            468999999997632  3444442   2 358999999998887654333 346666778999999999999998653  


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      ++||||||+||+++ ++.++|+|||.+...
T Consensus       170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      170 LVHGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            99999999999999 889999999998754


No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54  E-value=1.4e-14  Score=129.22  Aligned_cols=204  Identities=25%  Similarity=0.306  Sum_probs=155.0

Q ss_pred             HHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCCC
Q 021891            5 EVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK----GLAFLHEEAERP   79 (306)
Q Consensus         5 E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~----~l~~LH~~~~~~   79 (306)
                      |+.....+ .|+|.++.+..+...+..|+-+|+| +.+|..+.......++...++..+.+...    ||.++|+.+   
T Consensus       167 ~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---  242 (524)
T KOG0601|consen  167 EFLSHHKIDSHENPVRDSPAWEGSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---  242 (524)
T ss_pred             hhhcccccCccccccccCcccccCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc---
Confidence            44444455 5899999999999999999999999 57999998877777899999999999999    999999988   


Q ss_pred             eEeccCCCCCeEEcCC-CcEEEeccCCcccCCCCCcc---eeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHH
Q 021891           80 VIYRDFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKT---HVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML  155 (306)
Q Consensus        80 iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  155 (306)
                      ++|-|+||.||+...+ ..++++|||+...+......   .......|...|++||... .-++.+.|||++|.++.+-.
T Consensus       243 ~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~  321 (524)
T KOG0601|consen  243 IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAI  321 (524)
T ss_pred             ccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhH
Confidence            9999999999999999 88999999999887665422   2222336778899999875 46789999999999999999


Q ss_pred             hCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          156 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       156 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      ++..........      .|.     +...   ..   +..++....+..+...+..|++.+|..|++++.+.++
T Consensus       322 l~~~~~~~g~~~------~W~-----~~r~---~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  322 LGSHLPSVGKNS------SWS-----QLRQ---GY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             hhcccccCCCCC------Ccc-----cccc---cc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            987665432111      010     0000   00   1111222223456669999999999999999888764


No 434
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.52  E-value=3.1e-14  Score=115.33  Aligned_cols=96  Identities=18%  Similarity=0.106  Sum_probs=77.9

Q ss_pred             HHHHHHHHhcCCCCc--ccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +++|+.++..+.|++  +...++    ....++||||++|++|.+....       .....++.+++.++.++|..+   
T Consensus        80 ~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~g---  145 (198)
T cd05144          80 AQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHG---  145 (198)
T ss_pred             HHHHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCC---
Confidence            467889999998874  445544    2455899999999998775421       335678899999999999988   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGPE  111 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  111 (306)
                      ++|+||||+||+++.++.++|+|||++.....
T Consensus       146 i~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         146 IIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             CCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            99999999999999999999999999976543


No 435
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.51  E-value=8.1e-14  Score=125.84  Aligned_cols=143  Identities=17%  Similarity=0.216  Sum_probs=113.3

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      ++-++-|+.|+||||++|++.++.++..|||+|-+  ..|..++.+.+    ...+..-+.||+.||.|||..++  ++|
T Consensus        57 ~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~----~~~v~~Gl~qIl~AL~FL~~d~~--lvH  128 (690)
T KOG1243|consen   57 KRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG----KEEVCLGLFQILAALSFLNDDCN--LVH  128 (690)
T ss_pred             HHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH----HHHHHHHHHHHHHHHHHHhccCC--eee
Confidence            46678899999999999999999999999999998  57888875543    67777789999999999986554  999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG  157 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg  157 (306)
                      ++|.-..|+|+..|..||++|.++........  ......--..|..|+.+....  ...|.|.|||++++++.|
T Consensus       129 gNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  129 GNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             ccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence            99999999999999999999998876443322  111112223466777553322  467999999999999998


No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.48  E-value=1.3e-13  Score=106.14  Aligned_cols=99  Identities=24%  Similarity=0.211  Sum_probs=85.4

Q ss_pred             HHHHHHHHhcCCC--CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            2 WQAEVNFLGDLVH--LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         2 ~~~E~~il~~l~H--~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      +.+|+.+++.+.|  .+++++++++...+..+++|||+.++.+..+        +......++.+++.+|.++|.....+
T Consensus        38 ~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~  109 (155)
T cd05120          38 REREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLV  109 (155)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceE
Confidence            6889999999976  5899999988887889999999988777654        55666788999999999999864334


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ++|+||+|+||++++.+.+++.|||.++.
T Consensus       110 i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120         110 LCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EEecCCCcceEEEECCcEEEEEecccccC
Confidence            99999999999999989999999999865


No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.33  E-value=1.3e-12  Score=123.09  Aligned_cols=192  Identities=23%  Similarity=0.240  Sum_probs=139.3

Q ss_pred             CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcC
Q 021891           15 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA   94 (306)
Q Consensus        15 ~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~   94 (306)
                      |-+++..--+.-....++|++|+.+++|...+...+ ..+.+-....+..+..+++|||+..   +.|+|++|.|+++..
T Consensus       864 P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~  939 (1205)
T KOG0606|consen  864 PAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAY  939 (1205)
T ss_pred             CceecccCCCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccch---hhcccccccchhhcc
Confidence            444433333344567899999999999999886554 4566666667777889999999977   899999999999999


Q ss_pred             CCcEEEeccCCcccCCCC---------------------C--------cceeeecccccccccCCcchhcCCCCchhHHH
Q 021891           95 DYNAKLSDFGLAKDGPEG---------------------D--------KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY  145 (306)
Q Consensus        95 ~~~~kl~Dfg~a~~~~~~---------------------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  145 (306)
                      +|..+++|||........                     .        .........||..|.+||...+..-...+|.|
T Consensus       940 ~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~ 1019 (1205)
T KOG0606|consen  940 DGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWW 1019 (1205)
T ss_pred             cCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhh
Confidence            999999999843221100                     0        00112235689999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 021891          146 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMS  225 (306)
Q Consensus       146 slG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (306)
                      ++|++++|.++|.+||...........+......+               ..-+...+..+.+++...+..++.+|-.+.
T Consensus      1020 ~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~---------------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1020 SSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPW---------------PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCC---------------CCCccccChhhhhhhhhhhccCchhccCcc
Confidence            99999999999999998765543322211111111               111233456788999999999999998766


No 438
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.33  E-value=3.8e-12  Score=102.07  Aligned_cols=98  Identities=20%  Similarity=0.171  Sum_probs=71.0

Q ss_pred             HHHHHHHhcCCCCc--ccceeeEEEeCCeeEEEEEcCCCCCHHHH-hhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCC
Q 021891            3 QAEVNFLGDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGSLENH-LFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAER   78 (306)
Q Consensus         3 ~~E~~il~~l~H~n--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~-l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~   78 (306)
                      +.|.+.+.++.+..  +.+.+++    ...++||||++++.+... +....  .. ..+..++.+++.++.++|. .+  
T Consensus        65 ~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~--  135 (187)
T cd05119          65 EKEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAG--  135 (187)
T ss_pred             HHHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccC--
Confidence            35666666664433  4455543    246899999998543211 11111  11 6678899999999999999 88  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE  111 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  111 (306)
                       ++|+||||+||+++ ++.++|+|||.+.....
T Consensus       136 -ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         136 -LVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             -cCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence             99999999999999 89999999999976433


No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.26  E-value=3e-11  Score=96.38  Aligned_cols=99  Identities=13%  Similarity=0.134  Sum_probs=75.2

Q ss_pred             HHHHHHHhcCCC--CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCC
Q 021891            3 QAEVNFLGDLVH--LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL-HEEAERP   79 (306)
Q Consensus         3 ~~E~~il~~l~H--~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~L-H~~~~~~   79 (306)
                      ++|++.|+++..  -++.+.+++    ..-+|||||+.++.+..-..+. ..++......+..+++.+|..| |..+   
T Consensus        74 ~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-~~~~~~~~~~i~~~i~~~l~~l~H~~g---  145 (197)
T cd05146          74 EKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-AKLNDEEMKNAYYQVLSMMKQLYKECN---  145 (197)
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-cccCHHHHHHHHHHHHHHHHHHHHhCC---
Confidence            489999999953  567777765    4568899999765442211111 1355566778889999999999 8888   


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCcccCC
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKDGP  110 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  110 (306)
                      ++|+||++.||+++ ++.+.|+|||.+....
T Consensus       146 lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         146 LVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             eecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            99999999999996 4679999999887653


No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23  E-value=2.3e-11  Score=95.84  Aligned_cols=95  Identities=22%  Similarity=0.118  Sum_probs=71.7

Q ss_pred             HHHHHHHHhcCCCCccc-ceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CC
Q 021891            2 WQAEVNFLGDLVHLNLV-KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA--ER   78 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv-~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--~~   78 (306)
                      +++|+++++.+.+.+++ +++.+.  ....++||||++|.++.+.-         .....++.+++.+|..||+.+  ..
T Consensus        39 ~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~  107 (170)
T cd05151          39 RENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTED---------FSDPENLEKIAKLLKKLHSSPLPDL  107 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccccc---------ccCHHHHHHHHHHHHHHhCCCCCCc
Confidence            67899999999765554 565543  33458999999998876530         111345678999999999976  12


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .++|+|++|.||+++ ++.++++|||.+..
T Consensus       108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             eeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            249999999999998 67899999998764


No 441
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21  E-value=7.2e-11  Score=91.34  Aligned_cols=94  Identities=24%  Similarity=0.347  Sum_probs=75.5

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      .+|++++.++.--.|..-+=+..+.+...|+|||++|..|++.+...        ...++..+-.-+.-||..+   |+|
T Consensus        47 ~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g---ivH  115 (204)
T COG3642          47 RREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAG---IVH  115 (204)
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC---eec
Confidence            57999999986655554444456677788999999999999888554        2456677777788899999   999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      +||.++||+++..+ +.++|||++..
T Consensus       116 GDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         116 GDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             CCCccceEEEeCCc-EEEEECCcccc
Confidence            99999999997765 88999999875


No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.19  E-value=5e-11  Score=107.57  Aligned_cols=105  Identities=19%  Similarity=0.132  Sum_probs=73.5

Q ss_pred             CHHHHHHHHhcCC----CCcccceeeEEE-eCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHH-HHHHhhc
Q 021891            1 MWQAEVNFLGDLV----HLNLVKLIGYCI-EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK-GLAFLHE   74 (306)
Q Consensus         1 ~~~~E~~il~~l~----H~niv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~-~l~~LH~   74 (306)
                      +|.+|++.+.++.    |.+-+.+-.++. .....++||||++|++|.+.........+   ...++.+++. .+..+|.
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLR  275 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHh
Confidence            3677888777762    333233322222 23456899999999999887643221222   2345555555 4678898


Q ss_pred             CCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCC
Q 021891           75 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPE  111 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  111 (306)
                      .|   ++|+|+||.||+++.++.++++|||++.....
T Consensus       276 ~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 DG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CC---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            88   99999999999999999999999999977543


No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18  E-value=1.6e-11  Score=109.86  Aligned_cols=198  Identities=22%  Similarity=0.164  Sum_probs=141.5

Q ss_pred             HHHHHhcC-CCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 021891            5 EVNFLGDL-VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYR   83 (306)
Q Consensus         5 E~~il~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~   83 (306)
                      |+.+...+ .|.+++.++..+...++.|+=-|||.++++...+ .-...+++..++.+..|++.++.++|+..   ++|+
T Consensus       315 ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~  390 (524)
T KOG0601|consen  315 EVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHL  390 (524)
T ss_pred             hhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchh---hhcc
Confidence            45555555 6889999888888788888999999999887766 22335788899999999999999999988   9999


Q ss_pred             cCCCCCeEEcCC-CcEEEeccCCcccCCCCCcceeeeccccccccc--CCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           84 DFKTSNILLDAD-YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA--APEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        84 dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      |+||+||++..+ +..+++|||..+.+.....     ...+.-++.  +++......+..++|++|||.-+.+..++...
T Consensus       391 d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~-----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l  465 (524)
T KOG0601|consen  391 DVKPSNILISNDGFFSKLGDFGCWTRLAFSSG-----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL  465 (524)
T ss_pred             cccccceeeccchhhhhccccccccccceecc-----cccccccccccchhhccccccccccccccccccccccccCccc
Confidence            999999999886 7789999998865322111     112223344  45444566788999999999999999998653


Q ss_pred             CCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhC
Q 021891          161 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK  232 (306)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~  232 (306)
                      -.....        |        ..+..-.-+.    .+ ....++..+.+.++..++..||++.++..+.+
T Consensus       466 s~~~~~--------~--------~~i~~~~~p~----~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  466 SESGVQ--------S--------LTIRSGDTPN----LP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             Cccccc--------c--------eeeecccccC----CC-chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence            222110        0        0000000011    11 11267788999999999999999998877654


No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.09  E-value=1.6e-09  Score=95.88  Aligned_cols=180  Identities=16%  Similarity=0.244  Sum_probs=129.7

Q ss_pred             HHHHhcCCCCcccceeeEEEe----CCeeEEEEEcCCCC-CHHHHhhcC--------------CCCCCHHHHHHHHHHHH
Q 021891            6 VNFLGDLVHLNLVKLIGYCIE----DDQRLLVYEFMPRG-SLENHLFRR--------------SLPLPWSIRMKIALGAA   66 (306)
Q Consensus         6 ~~il~~l~H~niv~~~~~~~~----~~~~~lv~e~~~~~-sL~~~l~~~--------------~~~l~~~~~~~~~~qi~   66 (306)
                      +++++++.|.|||++.++|..    +..+++|++|.++. +|.++....              +...+++.+|.++.|+.
T Consensus       324 ve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLt  403 (655)
T KOG3741|consen  324 VEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLT  403 (655)
T ss_pred             HHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHH
Confidence            678999999999999998873    34678999998864 888766432              23578899999999999


Q ss_pred             HHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHH
Q 021891           67 KGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS  146 (306)
Q Consensus        67 ~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  146 (306)
                      .||.++|+.|   +.-+-|.+.+|+++.+.+++|...|+.........                |.+.   --.+-|.=.
T Consensus       404 aaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~----------------~~le---~~Qq~D~~~  461 (655)
T KOG3741|consen  404 AALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT----------------EPLE---SQQQNDLRD  461 (655)
T ss_pred             HHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCCCC----------------cchh---HHhhhhHHH
Confidence            9999999999   88899999999999998999988887655433210                1121   134678889


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 021891          147 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE  226 (306)
Q Consensus       147 lG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  226 (306)
                      ||.+++.|.||..--... ...    ....                  ........+.++++++......++++ -++.+
T Consensus       462 lG~ll~aLAt~~~ns~~~-d~~----~~s~------------------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~  517 (655)
T KOG3741|consen  462 LGLLLLALATGTENSNRT-DST----QSSH------------------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQD  517 (655)
T ss_pred             HHHHHHHHhhcccccccc-cch----HHHH------------------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHH
Confidence            999999999985421000 000    0000                  00112244678888888888888887 67777


Q ss_pred             HHHHh
Q 021891          227 VVEAL  231 (306)
Q Consensus       227 ll~~l  231 (306)
                      ++.++
T Consensus       518 llp~~  522 (655)
T KOG3741|consen  518 LLPMI  522 (655)
T ss_pred             HHHHH
Confidence            77653


No 445
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.09  E-value=1.1e-09  Score=92.17  Aligned_cols=104  Identities=15%  Similarity=0.131  Sum_probs=81.4

Q ss_pred             HHHHHHHHhcCCCCcc--cceeeEEEe-----CCeeEEEEEcCCCC-CHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHh
Q 021891            2 WQAEVNFLGDLVHLNL--VKLIGYCIE-----DDQRLLVYEFMPRG-SLENHLFRR-SLPLPWSIRMKIALGAAKGLAFL   72 (306)
Q Consensus         2 ~~~E~~il~~l~H~ni--v~~~~~~~~-----~~~~~lv~e~~~~~-sL~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~L   72 (306)
                      +.+|.+.+..|..-+|  ++.+++++.     ....+||||++++. +|.+++... ....+......++.+++..+.-|
T Consensus        75 a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L  154 (268)
T PRK15123         75 ADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM  154 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            5689998888854443  455666543     23468999999876 899987532 23456677889999999999999


Q ss_pred             hcCCCCCeEeccCCCCCeEEcC-------CCcEEEeccCCccc
Q 021891           73 HEEAERPVIYRDFKTSNILLDA-------DYNAKLSDFGLAKD  108 (306)
Q Consensus        73 H~~~~~~iiH~dlkp~Nill~~-------~~~~kl~Dfg~a~~  108 (306)
                      |..|   |+|+||+++|||++.       ++.+.|+||+.++.
T Consensus       155 H~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        155 HAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            9999   999999999999975       46789999998854


No 446
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.04  E-value=9.8e-11  Score=106.62  Aligned_cols=161  Identities=21%  Similarity=0.278  Sum_probs=109.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeec-------cccccc
Q 021891           54 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTR-------VMGTYG  126 (306)
Q Consensus        54 ~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~-------~~gt~~  126 (306)
                      ..+....=+.+++.|+.|+|..-.  +||++|.|++|.++.++.+||+.|+.+..............       ..-...
T Consensus        97 aTe~~f~nl~~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~  174 (700)
T KOG2137|consen   97 ATEDGFANLGNVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLN  174 (700)
T ss_pred             cccHhhhhhhcccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcc
Confidence            334445556677899999998643  99999999999999999999999998866444221111111       123457


Q ss_pred             ccCCcchhcCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHH
Q 021891          127 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK  205 (306)
Q Consensus       127 y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (306)
                      |.|||++.+..-+.++|+||+|+++|.+.. |+.-+........   ....           ...+..-...++...+.+
T Consensus       175 f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~---~~~~-----------~~~~~~~~~~~s~~~p~e  240 (700)
T KOG2137|consen  175 FLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS---YSFS-----------RNLLNAGAFGYSNNLPSE  240 (700)
T ss_pred             cccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcch---hhhh-----------hcccccccccccccCcHH
Confidence            999999998888899999999999999984 4444433211110   0000           001111111223455788


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHH
Q 021891          206 AAQLAAHCLSRDPKARPLMSEVVEA  230 (306)
Q Consensus       206 ~~~li~~~l~~~p~~Rps~~ell~~  230 (306)
                      +.+=+.+++..+..-||++.++...
T Consensus       241 l~~~l~k~l~~~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  241 LRESLKKLLNGDSAVRPTLDLLLSI  265 (700)
T ss_pred             HHHHHHHHhcCCcccCcchhhhhcc
Confidence            9999999999999999988777653


No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.01  E-value=1.7e-09  Score=83.49  Aligned_cols=103  Identities=22%  Similarity=0.243  Sum_probs=78.1

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCC-CCHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR-GSLENHLFRRSLP-LPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      ++|+++|.++.--.|.--.-++.+...-.|+|||++| .++.+++...... ........++..|-+.+.-||.++   +
T Consensus        58 ~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---i  134 (229)
T KOG3087|consen   58 KQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---I  134 (229)
T ss_pred             HHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---e
Confidence            6789999888655555444455666777899999976 3888888654322 333333788999999999999999   9


Q ss_pred             EeccCCCCCeEEcCCC-c--EEEeccCCccc
Q 021891           81 IYRDFKTSNILLDADY-N--AKLSDFGLAKD  108 (306)
Q Consensus        81 iH~dlkp~Nill~~~~-~--~kl~Dfg~a~~  108 (306)
                      +|+||..+||++..++ .  +.++|||++..
T Consensus       135 iHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  135 IHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ecccccccceEEecCCCcCceEEEeecchhc
Confidence            9999999999996544 2  48999999865


No 448
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.98  E-value=4.3e-09  Score=85.61  Aligned_cols=104  Identities=24%  Similarity=0.227  Sum_probs=83.5

Q ss_pred             HHHHHHHHhcCCCC--cccceeeEEEeCC----eeEEEEEcCCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            2 WQAEVNFLGDLVHL--NLVKLIGYCIEDD----QRLLVYEFMPRG-SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         2 ~~~E~~il~~l~H~--niv~~~~~~~~~~----~~~lv~e~~~~~-sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      ..+|.+.+..|..-  .+.+.+++.....    ..+||+|++++. +|.+++..... .+......++.+++..+.-||.
T Consensus        58 a~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~lH~  136 (206)
T PF06293_consen   58 AKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKLHD  136 (206)
T ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHHHH
Confidence            35788888888543  3456777766533    347999999874 89998865332 6777788999999999999999


Q ss_pred             CCCCCeEeccCCCCCeEEcCCC---cEEEeccCCcccC
Q 021891           75 EAERPVIYRDFKTSNILLDADY---NAKLSDFGLAKDG  109 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~  109 (306)
                      .|   |+|+|+++.|||++.++   .+.++||+.++..
T Consensus       137 ~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  137 AG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             Cc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            99   99999999999998887   8999999987653


No 449
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.95  E-value=2.4e-08  Score=86.53  Aligned_cols=195  Identities=16%  Similarity=0.179  Sum_probs=126.6

Q ss_pred             eEEEEEcCCCC-CHHHHhh-----cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEecc
Q 021891           30 RLLVYEFMPRG-SLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDF  103 (306)
Q Consensus        30 ~~lv~e~~~~~-sL~~~l~-----~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df  103 (306)
                      ..++|..+.+. ...+++.     +......|......++.++.+.+-||+.|   .+-+|++++|+|+++++.+.|.|-
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcc
Confidence            56788888765 2233221     11234789999999999999999999999   999999999999999999999985


Q ss_pred             CCcccCCCCCcceeeecccccccccCCcchh-----cCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCCCCCc----c-h
Q 021891          104 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTSRSDVYSFGVVLLEMLTG-RRSMDKNRPNGEH----N-L  172 (306)
Q Consensus       104 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~elltg-~~pf~~~~~~~~~----~-~  172 (306)
                      ........+   ......+|...|.+||.-.     +..-+...|.|.||+++|+++.| ..||.+.......    + -
T Consensus       162 Dsfqi~~ng---~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~  238 (637)
T COG4248         162 DSFQINANG---TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD  238 (637)
T ss_pred             cceeeccCC---ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence            544333221   1122346888999999754     33456789999999999999887 8999764322111    0 1


Q ss_pred             HHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccC--CCCCCCCHHHHHHHhC
Q 021891          173 VEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR--DPKARPLMSEVVEALK  232 (306)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~--~p~~Rps~~ell~~l~  232 (306)
                      +.......... .......+.....+ ...+.++..|..+|+..  ++.-|||++..+..|.
T Consensus       239 Ia~g~f~ya~~-~~~g~~p~P~~~P~-~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~  298 (637)
T COG4248         239 IAHGRFAYASD-QRRGLKPPPRSIPL-SMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD  298 (637)
T ss_pred             hhcceeeechh-ccCCCCCCCCCCCh-hhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence            11111000000 10111112111111 23456788899999854  3678999988776654


No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.93  E-value=5.3e-09  Score=85.99  Aligned_cols=106  Identities=23%  Similarity=0.260  Sum_probs=81.8

Q ss_pred             CHHHHHHHHhcCCCC--cccceeeEEEeCC---eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 021891            1 MWQAEVNFLGDLVHL--NLVKLIGYCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE   75 (306)
Q Consensus         1 ~~~~E~~il~~l~H~--niv~~~~~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~   75 (306)
                      ++++|+++++.+.+.  ++.+++.+.....   ..++||||++|.++.+.+..  ..++......++.+++.+|..||+.
T Consensus        41 ~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~  118 (223)
T cd05154          41 DVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSV  118 (223)
T ss_pred             cHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCC
Confidence            368999999999764  4577887766542   56899999999888775532  2467777778888888888888853


Q ss_pred             C-----------------------------------------------------CCCeEeccCCCCCeEEcC--CCcEEE
Q 021891           76 A-----------------------------------------------------ERPVIYRDFKTSNILLDA--DYNAKL  100 (306)
Q Consensus        76 ~-----------------------------------------------------~~~iiH~dlkp~Nill~~--~~~~kl  100 (306)
                      .                                                     ...++|+|+++.||+++.  ++.+.|
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~i  198 (223)
T cd05154         119 DPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAV  198 (223)
T ss_pred             ChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEE
Confidence            1                                                     123799999999999988  667899


Q ss_pred             eccCCccc
Q 021891          101 SDFGLAKD  108 (306)
Q Consensus       101 ~Dfg~a~~  108 (306)
                      +||+.+..
T Consensus       199 ID~e~~~~  206 (223)
T cd05154         199 LDWELATL  206 (223)
T ss_pred             Eecccccc
Confidence            99998864


No 451
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.92  E-value=3.8e-09  Score=96.85  Aligned_cols=101  Identities=13%  Similarity=0.036  Sum_probs=68.0

Q ss_pred             HHHHHHHHhcCC----CCcccceeeEEEe-CCeeEEEEEcCCCCCHHHHh--hcCCC---CCCHHHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLV----HLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHL--FRRSL---PLPWSIRMKIALGAAKGLAF   71 (306)
Q Consensus         2 ~~~E~~il~~l~----H~niv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l--~~~~~---~l~~~~~~~~~~qi~~~l~~   71 (306)
                      |.+|+..+.++.    +.+.+.+-.++.+ ....+|||||+.|+.+.+.-  .+.+.   .+....+..++.|++     
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-----  277 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-----  277 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-----
Confidence            566776666652    4444444444332 34568999999999998742  22221   233444445555554     


Q ss_pred             hhcCCCCCeEeccCCCCCeEEcCCC----cEEEeccCCcccCCCC
Q 021891           72 LHEEAERPVIYRDFKTSNILLDADY----NAKLSDFGLAKDGPEG  112 (306)
Q Consensus        72 LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~a~~~~~~  112 (306)
                        ..|   ++|+|+||.||+++.+|    .++++|||++......
T Consensus       278 --~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        278 --RDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             --hCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence              356   99999999999999888    9999999999876543


No 452
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.89  E-value=5e-09  Score=83.28  Aligned_cols=98  Identities=21%  Similarity=0.233  Sum_probs=65.5

Q ss_pred             HHHHHHHHhcCCCC--cccceeeEEEeCCeeEEEEEcCC--CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH-hhcCC
Q 021891            2 WQAEVNFLGDLVHL--NLVKLIGYCIEDDQRLLVYEFMP--RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF-LHEEA   76 (306)
Q Consensus         2 ~~~E~~il~~l~H~--niv~~~~~~~~~~~~~lv~e~~~--~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~-LH~~~   76 (306)
                      .++|++.|.++..-  ++.+.+++.    .-+|||||++  |..+..+....   ++.+....++.+++..+.. +|..|
T Consensus        55 ~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~g  127 (188)
T PF01163_consen   55 AKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAG  127 (188)
T ss_dssp             HHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcC
Confidence            36899999999765  567777653    3479999998  55554433211   1234456677777775555 57888


Q ss_pred             CCCeEeccCCCCCeEEcCCCcEEEeccCCcccCC
Q 021891           77 ERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGP  110 (306)
Q Consensus        77 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  110 (306)
                         ++|+||.+.||+++.+ .+.|+|||.+....
T Consensus       128 ---ivHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  128 ---IVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             ---EEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             ---ceecCCChhhEEeecc-eEEEEecCcceecC
Confidence               9999999999999877 89999999887643


No 453
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.73  E-value=4.7e-07  Score=72.29  Aligned_cols=102  Identities=28%  Similarity=0.270  Sum_probs=82.5

Q ss_pred             HHHHHHHhcCCC-CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021891            3 QAEVNFLGDLVH-LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF--RRSLPLPWSIRMKIALGAAKGLAFLHEEAERP   79 (306)
Q Consensus         3 ~~E~~il~~l~H-~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~--~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~   79 (306)
                      .+|.-+|+.+.+ +++.+++|+|    ..++|.||...+++...-.  ..-...+|..+.+++.++++.+.+|+......
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            468889999976 6999999999    3477999998776643210  11124689999999999999999999865555


Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      +.-.|++++|+-++++|++|++|...+..
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcch
Confidence            89999999999999999999999987654


No 454
>PRK09902 hypothetical protein; Provisional
Probab=98.67  E-value=2.6e-07  Score=74.13  Aligned_cols=104  Identities=16%  Similarity=0.099  Sum_probs=79.7

Q ss_pred             HHHHHHHHhcCCC--CcccceeeEEEeC----CeeEEEEEcCCC-CCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhh
Q 021891            2 WQAEVNFLGDLVH--LNLVKLIGYCIED----DQRLLVYEFMPR-GSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLH   73 (306)
Q Consensus         2 ~~~E~~il~~l~H--~niv~~~~~~~~~----~~~~lv~e~~~~-~sL~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~LH   73 (306)
                      |.+|+..|.+|..  -.+.+........    ...+||+|-++| .+|.+.+.+.. .+.+......++.+++..+.-||
T Consensus        66 f~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH  145 (216)
T PRK09902         66 IVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH  145 (216)
T ss_pred             HHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH
Confidence            7899999999953  2344555222221    135799997753 48988875542 35677888899999999999999


Q ss_pred             cCCCCCeEeccCCCCCeEEcCCCc--EEEeccCCccc
Q 021891           74 EEAERPVIYRDFKTSNILLDADYN--AKLSDFGLAKD  108 (306)
Q Consensus        74 ~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~  108 (306)
                      ..+   +.|+|+.+.||+++.+|.  ++++||.-++.
T Consensus       146 ~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        146 SVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            999   999999999999987777  89999987765


No 455
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.62  E-value=7.5e-09  Score=93.83  Aligned_cols=149  Identities=20%  Similarity=0.185  Sum_probs=113.9

Q ss_pred             HHHHHHHhcCCCCc-ccceeeEEEeCCeeEEEEEcCCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRG-SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H~n-iv~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .-++++|.+++||| .+.+++-+..++..+++++++.++ +-..........+..-+...+.+.-+.++++||+..   -
T Consensus       281 rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~  357 (829)
T KOG0576|consen  281 RLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY---K  357 (829)
T ss_pred             HHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc---c
Confidence            45789999999999 778888777788899999999877 222222111122444455667777888999999965   5


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS  160 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  160 (306)
                      +|+|    ||+..+ +..+.+||+....+....   ......+++.|+|||+.....+..+.|+|++|.-..+|.-|.+|
T Consensus       358 ~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  358 VHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP  429 (829)
T ss_pred             cCcc----cccccc-cccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence            8998    776654 678999999988765443   34456789999999999999999999999999877788777776


Q ss_pred             CC
Q 021891          161 MD  162 (306)
Q Consensus       161 f~  162 (306)
                      -.
T Consensus       430 r~  431 (829)
T KOG0576|consen  430 RS  431 (829)
T ss_pred             CC
Confidence            54


No 456
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.49  E-value=6.2e-07  Score=86.78  Aligned_cols=196  Identities=20%  Similarity=0.238  Sum_probs=138.7

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCee----EEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQR----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAER   78 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~----~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~   78 (306)
                      +-|++.+..+.|+|++.++.|.......    .+..++|..-++...+.. -..++.++...+..++.+||.|+|+..  
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~--  306 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLS--  306 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhc--
Confidence            4577788889999999999987765433    355678888888887744 347899999999999999999999986  


Q ss_pred             CeEeccCCCC---CeEEcCCCcEEEe--ccCCcccCCCCCcceeeecccccccccCCcchhcCCCCc--hhHHHHHHHHH
Q 021891           79 PVIYRDFKTS---NILLDADYNAKLS--DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVL  151 (306)
Q Consensus        79 ~iiH~dlkp~---Nill~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~DiwslG~il  151 (306)
                       ..|.-|..+   +.-.+..+.+.++  ||+.+....+.....   ...-...|.++|......+..  ..|+|.+|...
T Consensus       307 -l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~  382 (1351)
T KOG1035|consen  307 -LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL  382 (1351)
T ss_pred             -cceeEEecccccccccCccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence             667666665   5555666777777  998887765443221   122344578888877655544  47999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHhhhhhhccccccccccCCccCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 021891          152 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL  231 (306)
Q Consensus       152 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l  231 (306)
                      ..+..|..+-......                   ..+.+.        .......+...+|+.-+.++|+++.+++.+.
T Consensus       383 ~~~~~~~~i~~~~~~~-------------------~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  383 LQLSQGEDISEKSAVP-------------------VSLLDV--------LSTSELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhhhcCcccccccch-------------------hhhhcc--------ccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence            9998876542211000                   000110        0111567889999999999999999999875


Q ss_pred             C
Q 021891          232 K  232 (306)
Q Consensus       232 ~  232 (306)
                      .
T Consensus       436 f  436 (1351)
T KOG1035|consen  436 F  436 (1351)
T ss_pred             h
Confidence            3


No 457
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.40  E-value=1e-06  Score=72.63  Aligned_cols=94  Identities=18%  Similarity=0.131  Sum_probs=68.5

Q ss_pred             HHHHHHHhcCCCC--cccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVHL--NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H~--niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      ++|++.|..|.-.  .|.+-+++    +.-++|||+++|-.|...-      ++.+....++..|+.-+.-+-..|   +
T Consensus       157 ~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~G---i  223 (304)
T COG0478         157 EREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRRG---I  223 (304)
T ss_pred             HHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHcC---c
Confidence            6899999999654  77787775    3447899999886665432      123334444555555555444667   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      +|+|+.+-||+++++|.+.++||--+...
T Consensus       224 VHGDlSefNIlV~~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         224 VHGDLSEFNILVTEDGDIVVIDWPQAVPI  252 (304)
T ss_pred             cccCCchheEEEecCCCEEEEeCcccccC
Confidence            99999999999999999999999766543


No 458
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.38  E-value=2.5e-06  Score=68.86  Aligned_cols=67  Identities=15%  Similarity=0.165  Sum_probs=52.5

Q ss_pred             eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           29 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        29 ~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..++||||++|..|.+..     .+++    .+...+.+++.-||..|   +.|+|.+|.|++++.++ ++++||+..+.
T Consensus       117 ~~~ll~EYIeG~~l~d~~-----~i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~k~~  183 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIE-----DIDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQGKRM  183 (229)
T ss_pred             EEEEEEEEecCeecccch-----hcCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECccccc
Confidence            456899999998887653     1232    24456778899999999   99999999999998655 89999986653


No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.24  E-value=1.2e-05  Score=66.30  Aligned_cols=106  Identities=15%  Similarity=0.145  Sum_probs=62.7

Q ss_pred             HHHHHHHHhcCCCCc--ccceeeEEEeCCeeEEEEEcCCCCC-HHHHh--------------hc-----CC---CCCCHH
Q 021891            2 WQAEVNFLGDLVHLN--LVKLIGYCIEDDQRLLVYEFMPRGS-LENHL--------------FR-----RS---LPLPWS   56 (306)
Q Consensus         2 ~~~E~~il~~l~H~n--iv~~~~~~~~~~~~~lv~e~~~~~s-L~~~l--------------~~-----~~---~~l~~~   56 (306)
                      .++|.++++.+..-.  +.+.+++....+...+|||+++|.+ +...+              .+     +.   ......
T Consensus        39 i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~  118 (226)
T TIGR02172        39 IKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQ  118 (226)
T ss_pred             HHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHH
Confidence            468999999986443  4688888888888889999998863 21111              00     00   011111


Q ss_pred             HH-HHHHH----------HHHH-HHHHhhcC-CCCCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           57 IR-MKIAL----------GAAK-GLAFLHEE-AERPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        57 ~~-~~~~~----------qi~~-~l~~LH~~-~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .. ..+..          .+.. ...+|... ....++|+|+.|.||++++++ +.|+||+.+..
T Consensus       119 ~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       119 SYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             HHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            00 00000          0001 11222211 123478999999999999888 99999998754


No 460
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.20  E-value=1.2e-05  Score=67.18  Aligned_cols=107  Identities=20%  Similarity=0.142  Sum_probs=64.7

Q ss_pred             HHHHHHHHhcCC-CCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhh-------------------cC---CCCCCHH--
Q 021891            2 WQAEVNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF-------------------RR---SLPLPWS--   56 (306)
Q Consensus         2 ~~~E~~il~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~-------------------~~---~~~l~~~--   56 (306)
                      +.+|+++++.+. +--+.+++++....+..++|||+++|.+|.....                   .-   ...+...  
T Consensus        38 ~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~  117 (244)
T cd05150          38 LEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLD  117 (244)
T ss_pred             hHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHH
Confidence            578999999884 4345678888777667899999999987764321                   00   0011100  


Q ss_pred             HHHHH-----------------------HHHHHHHHHHhh-cCCCCCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           57 IRMKI-----------------------ALGAAKGLAFLH-EEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        57 ~~~~~-----------------------~~qi~~~l~~LH-~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .....                       ..++...|.... ......++|+|+.|.||++++++.+.|+||+.+..
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         118 RRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             HHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            00000                       111111111111 01123389999999999999987788999987753


No 461
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.20  E-value=5.5e-06  Score=75.83  Aligned_cols=106  Identities=16%  Similarity=0.110  Sum_probs=70.9

Q ss_pred             CHHHHHHHHhcCC-----CCcccceeeEE-EeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc
Q 021891            1 MWQAEVNFLGDLV-----HLNLVKLIGYC-IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE   74 (306)
Q Consensus         1 ~~~~E~~il~~l~-----H~niv~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~   74 (306)
                      +|.+|...+.++.     .++ +++=.++ +-.....|+|||+.|-.+.+...-....++...+.....++.--  .+-.
T Consensus       207 Dy~~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~--q~~~  283 (517)
T COG0661         207 DYRREAANAERFRENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLR--QLLR  283 (517)
T ss_pred             CHHHHHHHHHHHHHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHH--HHHh
Confidence            4677888777762     233 2222222 22456689999999998888753333456655554444443322  2222


Q ss_pred             CCCCCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCC
Q 021891           75 EAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEG  112 (306)
Q Consensus        75 ~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  112 (306)
                      .|   +.|.|.+|.||+++.+|.+.+.|||+.......
T Consensus       284 dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         284 DG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             cC---ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence            45   999999999999999999999999999876553


No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.07  E-value=1.2e-05  Score=73.49  Aligned_cols=104  Identities=15%  Similarity=0.073  Sum_probs=70.5

Q ss_pred             CHHHHHHHHhcC----CCCc------ccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 021891            1 MWQAEVNFLGDL----VHLN------LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA   70 (306)
Q Consensus         1 ~~~~E~~il~~l----~H~n------iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~   70 (306)
                      +|.+|++-..++    .|-+      |.++|-.+  .....|+||||+|..+.|+-.-....++...+..-+.+...-+-
T Consensus       240 DF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qI  317 (538)
T KOG1235|consen  240 DFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQI  317 (538)
T ss_pred             chHHHHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence            366677655443    4544      45555433  34678999999998776654333334666666665555554444


Q ss_pred             HhhcCCCCCeEeccCCCCCeEEcC----CCcEEEeccCCcccCCC
Q 021891           71 FLHEEAERPVIYRDFKTSNILLDA----DYNAKLSDFGLAKDGPE  111 (306)
Q Consensus        71 ~LH~~~~~~iiH~dlkp~Nill~~----~~~~kl~Dfg~a~~~~~  111 (306)
                      +.|  |   ++|+|=+|.||+++.    ++.+.+.|||+......
T Consensus       318 f~~--G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  318 FKT--G---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             Hhc--C---CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            444  4   999999999999984    67899999999987544


No 463
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=98.04  E-value=5.1e-05  Score=60.97  Aligned_cols=92  Identities=18%  Similarity=0.210  Sum_probs=67.0

Q ss_pred             HHHHHHHHhcCC------CCcccceeeEEEeCCeeEEEEEcCCC------CCHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 021891            2 WQAEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPR------GSLENHLFRRSLPLPWSIRMKIALGAAKGL   69 (306)
Q Consensus         2 ~~~E~~il~~l~------H~niv~~~~~~~~~~~~~lv~e~~~~------~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l   69 (306)
                      +.+|+.-..++.      +.+|.++||+.+++....+|+|.+.+      .+|.+++.+.  .++. .....+.++.   
T Consensus        58 ~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~~~~~L~~f~---  131 (199)
T PF10707_consen   58 NRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG--GLTE-ELRQALDEFK---  131 (199)
T ss_pred             HHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC--CccH-HHHHHHHHHH---
Confidence            566777666665      78999999999999999999998654      2788888544  3555 4444444444   


Q ss_pred             HHhhcCCCCCeEeccCCCCCeEEcCCC----cEEEec
Q 021891           70 AFLHEEAERPVIYRDFKTSNILLDADY----NAKLSD  102 (306)
Q Consensus        70 ~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~D  102 (306)
                      .||-..+   |+.+||+|.||++..+.    .+.|+|
T Consensus       132 ~~l~~~~---Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  132 RYLLDHH---IVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             HHHHHcC---CeecCCCcccEEEEecCCCceEEEEEe
Confidence            5555556   99999999999995432    467776


No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.87  E-value=6.4e-05  Score=62.47  Aligned_cols=30  Identities=20%  Similarity=0.233  Sum_probs=25.5

Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .++|+|+.+.||+++.++..-|+||+.+..
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            389999999999998776567999998754


No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.84  E-value=0.0001  Score=72.33  Aligned_cols=41  Identities=17%  Similarity=0.337  Sum_probs=32.3

Q ss_pred             HHHHHHHHhcCC-CCcc--cceeeEEEeC---CeeEEEEEcCCCCCH
Q 021891            2 WQAEVNFLGDLV-HLNL--VKLIGYCIED---DQRLLVYEFMPRGSL   42 (306)
Q Consensus         2 ~~~E~~il~~l~-H~ni--v~~~~~~~~~---~~~~lv~e~~~~~sL   42 (306)
                      +.+|+++|+.|. |.+|  .+++.+|.+.   +..|+||||++|..+
T Consensus        85 ~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~  131 (822)
T PLN02876         85 VEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             HHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence            679999999995 6665  7888887764   467899999988643


No 466
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.77  E-value=0.00012  Score=59.92  Aligned_cols=98  Identities=19%  Similarity=0.206  Sum_probs=67.3

Q ss_pred             HHHHHHHhcCC--CCcccceeeEEEeCCeeEEEEEcCCCCCH-HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCC
Q 021891            3 QAEVNFLGDLV--HLNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE-EAER   78 (306)
Q Consensus         3 ~~E~~il~~l~--H~niv~~~~~~~~~~~~~lv~e~~~~~sL-~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~~~   78 (306)
                      .+|+.-|+++.  +-.+.+-+++.    +-.|||||+....+ .-.|.  ...+.......+..++++.+.-|-. .+  
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~--  187 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAG--  187 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcC--
Confidence            46888888874  33445555543    34789999955311 01111  1123333567778888888887776 66  


Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccCC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDGP  110 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  110 (306)
                       +||+||..-|||+. ++.+.|+|||-|....
T Consensus       188 -LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         188 -LVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             -cccccchhhheEEE-CCeEEEEECccccccC
Confidence             99999999999998 8889999999887643


No 467
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.68  E-value=5.1e-06  Score=82.74  Aligned_cols=156  Identities=14%  Similarity=0.009  Sum_probs=114.1

Q ss_pred             HHHHHHhcCCCCcccceeeEEEe--CCeeEEEEEcCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHhhcCCC-
Q 021891            4 AEVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLHEEAE-   77 (306)
Q Consensus         4 ~E~~il~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~~-   77 (306)
                      .|...+++..|+++...+.-...  ....+.+++|+.+|.+.+.|.+..   ..+...-+.....+.+.+..-+|+..+ 
T Consensus      1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnl 1357 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNL 1357 (2724)
T ss_pred             hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccC
Confidence            44455666789998877765543  335689999999999999987643   234555555555554666666555432 


Q ss_pred             -CCeEeccCCCCCeEEcCCCcEEEeccCCcccCCCCCcceeeecccccccccCCcchhcCCCCchhHHHHHHHHHHHHHh
Q 021891           78 -RPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT  156 (306)
Q Consensus        78 -~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  156 (306)
                       .-.+|++||+-|.+|..+-.+|++++|+.+...+.  ........+++-|+.+++...-.++.++|+|..|+-+|+..-
T Consensus      1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~--~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV--LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD 1435 (2724)
T ss_pred             CccchhhhhhhhccceecCCcccccccccccccCch--HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence             33789999999999999999999999999832221  111233556778899998888889999999999999999988


Q ss_pred             CCCCC
Q 021891          157 GRRSM  161 (306)
Q Consensus       157 g~~pf  161 (306)
                      |..+|
T Consensus      1436 ~n~~f 1440 (2724)
T KOG1826|consen 1436 GNAYF 1440 (2724)
T ss_pred             ccHHH
Confidence            87665


No 468
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.57  E-value=7.5e-05  Score=67.12  Aligned_cols=45  Identities=24%  Similarity=0.345  Sum_probs=36.0

Q ss_pred             HHHHHhcCCCCcccceeeEEEeCC-eeEEEEEcCCCCCHHHHhhcCC
Q 021891            5 EVNFLGDLVHLNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRS   50 (306)
Q Consensus         5 E~~il~~l~H~niv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~   50 (306)
                      .+++++.+.|+|...++++.+... ...+|||++ +.||.+.+..+.
T Consensus        32 r~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~   77 (725)
T KOG1093|consen   32 RFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN   77 (725)
T ss_pred             hhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc
Confidence            467888999999999999877543 456889999 569999886554


No 469
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.41  E-value=0.00068  Score=55.85  Aligned_cols=106  Identities=20%  Similarity=0.209  Sum_probs=55.5

Q ss_pred             HHHHHHHHhcCCCC--cccceeeEEEe---CCeeEEEEEcCCCCCHHH----------------Hhh---cC---CCCCC
Q 021891            2 WQAEVNFLGDLVHL--NLVKLIGYCIE---DDQRLLVYEFMPRGSLEN----------------HLF---RR---SLPLP   54 (306)
Q Consensus         2 ~~~E~~il~~l~H~--niv~~~~~~~~---~~~~~lv~e~~~~~sL~~----------------~l~---~~---~~~l~   54 (306)
                      +.+|..+++.|...  .+.+++.+...   ....+++|++++|..+..                .+.   +.   ...+.
T Consensus        37 ~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~  116 (239)
T PF01636_consen   37 LRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFA  116 (239)
T ss_dssp             HHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHT
T ss_pred             HHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhcccccccccccc
Confidence            46788888888533  35677765433   335689999999988777                110   01   01111


Q ss_pred             HHH---------HHHH------------HHHHHH-HHHHhhc----CCCCCeEeccCCCCCeEEc-CCCcEEEeccCCcc
Q 021891           55 WSI---------RMKI------------ALGAAK-GLAFLHE----EAERPVIYRDFKTSNILLD-ADYNAKLSDFGLAK  107 (306)
Q Consensus        55 ~~~---------~~~~------------~~qi~~-~l~~LH~----~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~  107 (306)
                      ...         ....            ...+.. .+..++.    .....++|+|+.+.||+++ .++.+-|+||+.+.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  117 DWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             cccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            100         0000            111222 2333332    1223499999999999999 66777899998764


No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.41  E-value=0.0011  Score=54.98  Aligned_cols=30  Identities=20%  Similarity=0.286  Sum_probs=26.4

Q ss_pred             CeEeccCCCCCeEEcC-CCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDA-DYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~  108 (306)
                      .++|+|+.+.||+++. ++.+.|+||..+..
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            4999999999999998 57899999988754


No 471
>PRK10593 hypothetical protein; Provisional
Probab=97.40  E-value=0.0015  Score=56.29  Aligned_cols=42  Identities=19%  Similarity=0.192  Sum_probs=33.0

Q ss_pred             CHHHHHHHHhcCCC---CcccceeeEEEeC---CeeEEEEEcCCCCCH
Q 021891            1 MWQAEVNFLGDLVH---LNLVKLIGYCIED---DQRLLVYEFMPRGSL   42 (306)
Q Consensus         1 ~~~~E~~il~~l~H---~niv~~~~~~~~~---~~~~lv~e~~~~~sL   42 (306)
                      +|.+|++.|+.|.-   -.+.++++++...   +..+||||+++|+++
T Consensus        53 ~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         53 VAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             HHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence            47899999999943   3678899887653   568999999998754


No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.39  E-value=0.00096  Score=56.16  Aligned_cols=29  Identities=24%  Similarity=0.321  Sum_probs=25.7

Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .++|+|+.|.||+++.++ +.|+||+.+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            389999999999999877 78999998865


No 473
>PLN02236 choline kinase
Probab=96.74  E-value=0.0081  Score=52.91  Aligned_cols=30  Identities=20%  Similarity=0.304  Sum_probs=26.0

Q ss_pred             CeEeccCCCCCeEEcC-CCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDA-DYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~  108 (306)
                      .++|+|+++.||++++ ++.+.++||..+..
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            4899999999999976 46799999988754


No 474
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.72  E-value=0.0088  Score=51.62  Aligned_cols=31  Identities=23%  Similarity=0.467  Sum_probs=28.0

Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      .++|+|+++.|++++.++-+-+.||+++..-
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            4899999999999999888999999998763


No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.64  E-value=0.011  Score=50.72  Aligned_cols=31  Identities=35%  Similarity=0.408  Sum_probs=26.8

Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..++|+|++|.||+++.++.+.|.||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            3499999999999999887778999988754


No 476
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.27  E-value=0.017  Score=50.66  Aligned_cols=30  Identities=17%  Similarity=0.255  Sum_probs=25.9

Q ss_pred             CeEeccCCCCCeEEcC-CCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDA-DYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~  108 (306)
                      .++|+|+.+.||++++ ++.++++||..|..
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            3799999999999975 57899999998854


No 477
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.19  E-value=0.02  Score=46.54  Aligned_cols=86  Identities=15%  Similarity=0.084  Sum_probs=53.8

Q ss_pred             HHHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 021891            2 WQAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVI   81 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~ii   81 (306)
                      |.++++++.++.  .|+++..  ...-.+.++.|.|-....          ...    .++..=+++|.-.|+.. ...+
T Consensus       105 y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~i----------~~~----N~i~agi~~L~~fH~~~-~~~l  165 (308)
T PF07387_consen  105 YFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIKI----------NFS----NFITAGIKDLMDFHSEN-QHCL  165 (308)
T ss_pred             hhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCccc----------chh----HHHHHhHHHHHHhhccC-CCee
Confidence            445566665553  2455542  123355688898843211          111    11111136778889655 4599


Q ss_pred             eccCCCCCeEEcCCCcEEEeccCCc
Q 021891           82 YRDFKTSNILLDADYNAKLSDFGLA  106 (306)
Q Consensus        82 H~dlkp~Nill~~~~~~kl~Dfg~a  106 (306)
                      |+|..|+||+.|..|.+||.|-+..
T Consensus       166 HGD~np~NiM~D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  166 HGDCNPDNIMCDKFGYLKLVDPVCL  190 (308)
T ss_pred             cCCCChhheeecCCCCEEecChhhh
Confidence            9999999999999999999996643


No 478
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.18  E-value=0.095  Score=42.92  Aligned_cols=43  Identities=33%  Similarity=0.539  Sum_probs=34.8

Q ss_pred             CHHHHHHHHhcCCC---CcccceeeEEEeCCeeEEEEEcCCCCCHH
Q 021891            1 MWQAEVNFLGDLVH---LNLVKLIGYCIEDDQRLLVYEFMPRGSLE   43 (306)
Q Consensus         1 ~~~~E~~il~~l~H---~niv~~~~~~~~~~~~~lv~e~~~~~sL~   43 (306)
                      +|..|+.-|..|.-   -+|.+++.+..+.++.|+||||++-+.+.
T Consensus        54 ~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          54 MFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             HHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            47788887777743   46778999999999999999999886655


No 479
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.11  E-value=0.032  Score=48.69  Aligned_cols=73  Identities=19%  Similarity=0.187  Sum_probs=55.4

Q ss_pred             eeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           29 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        29 ~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..|++|++- |++|.- +    +...++++..++.+.+..+.-+..+-  +.-|||+.-.||+|+ +|.+.|+||-+++.
T Consensus       300 y~yl~~kdh-gt~is~-i----k~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         300 YLYLHFKDH-GTPISI-I----KADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             EEEEEEecC-Cceeee-e----ecccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeeeeec
Confidence            456777775 445432 2    12457888889998888777776654  388999999999999 99999999999985


Q ss_pred             CC
Q 021891          109 GP  110 (306)
Q Consensus       109 ~~  110 (306)
                      ..
T Consensus       371 ~~  372 (488)
T COG5072         371 SY  372 (488)
T ss_pred             cc
Confidence            43


No 480
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.06  E-value=0.01  Score=50.99  Aligned_cols=93  Identities=19%  Similarity=0.174  Sum_probs=62.8

Q ss_pred             HHHHHHHhcCCC--CcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            3 QAEVNFLGDLVH--LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         3 ~~E~~il~~l~H--~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      .+|+..|+.|.-  --|.+.+++.    .-++|||++.|-.|...-.    ..+..++..-+..   -+--|-.+|   +
T Consensus       158 ~kEfafmkaL~e~gfpVPkpiD~~----RH~Vvmelv~g~Pl~~v~~----v~d~~~ly~~lm~---~Iv~la~~G---l  223 (465)
T KOG2268|consen  158 TKEFAFMKALYERGFPVPKPIDHN----RHCVVMELVDGYPLRQVRH----VEDPPTLYDDLMG---LIVRLANHG---L  223 (465)
T ss_pred             HHHHHHHHHHHHcCCCCCCccccc----ceeeHHHhhcccceeeeee----cCChHHHHHHHHH---HHHHHHHcC---c
Confidence            478888888843  2355666654    3478999998877765321    1233333333332   334455566   9


Q ss_pred             EeccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           81 IYRDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        81 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      ||+|..-=||++++++.++++||--....
T Consensus       224 IHgDFNEFNimv~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  224 IHGDFNEFNIMVKDDDKIVVIDFPQMVST  252 (465)
T ss_pred             eecccchheeEEecCCCEEEeechHhhcc
Confidence            99999999999999999999999765443


No 481
>PTZ00384 choline kinase; Provisional
Probab=95.76  E-value=0.045  Score=48.87  Aligned_cols=29  Identities=24%  Similarity=0.084  Sum_probs=24.0

Q ss_pred             CeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..+|.|+-+.||+.+. +.+.++||..|..
T Consensus       228 VfCHNDL~~gNIL~~~-~~l~lID~EYA~~  256 (383)
T PTZ00384        228 LFCHNDLFFTNILDFN-QGIYFIDFDFAGF  256 (383)
T ss_pred             eeeeccCCcccEEecC-CCEEEEEeccccC
Confidence            4899999999999755 4599999988753


No 482
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.73  E-value=0.051  Score=42.56  Aligned_cols=91  Identities=15%  Similarity=0.153  Sum_probs=62.1

Q ss_pred             HHHHHHHHhcCCCCccc-ceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 021891            2 WQAEVNFLGDLVHLNLV-KLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV   80 (306)
Q Consensus         2 ~~~E~~il~~l~H~niv-~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~i   80 (306)
                      |+.|+++|..++--++- ++|.|..+    ++.|||+.|-.|.+.....    +-.    -+..+++.-.-|-..|   |
T Consensus        62 l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~L~~~~~~~----~rk----~l~~vlE~a~~LD~~G---I  126 (201)
T COG2112          62 LEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRPLGKLEIGG----DRK----HLLRVLEKAYKLDRLG---I  126 (201)
T ss_pred             HHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcchhhhhhcc----cHH----HHHHHHHHHHHHHHhc---c
Confidence            67899999999877765 56665432    4559999988888765321    222    2334555545555666   8


Q ss_pred             EeccCCC--CCeEEcCCCcEEEeccCCccc
Q 021891           81 IYRDFKT--SNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        81 iH~dlkp--~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      -|..|.-  .||++. ++.+.|+||..|+.
T Consensus       127 ~H~El~~~~k~vlv~-~~~~~iIDFd~At~  155 (201)
T COG2112         127 EHGELSRPWKNVLVN-DRDVYIIDFDSATF  155 (201)
T ss_pred             chhhhcCCceeEEec-CCcEEEEEccchhh
Confidence            8888874  456664 44899999999874


No 483
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=95.69  E-value=0.028  Score=48.47  Aligned_cols=31  Identities=29%  Similarity=0.230  Sum_probs=27.0

Q ss_pred             CCeEeccCCCCCeEEcCC----CcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDAD----YNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~  108 (306)
                      ..++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            458999999999999875    8899999998753


No 484
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.44  E-value=0.061  Score=47.16  Aligned_cols=101  Identities=16%  Similarity=0.151  Sum_probs=67.9

Q ss_pred             HHHHHHHhcCCCCcccceeeEEEeCCeeEEEEEcCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 021891            3 QAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY   82 (306)
Q Consensus         3 ~~E~~il~~l~H~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~~~~iiH   82 (306)
                      +.|++-|++|....|.----+..  ..-.|||+|+.....-.-. -+...++...+..+-.|++.-+.-|.....  +||
T Consensus       214 EKE~RNLkRl~~aGIP~PePIlL--k~hVLVM~FlGrdgw~aPk-LKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~--LVH  288 (520)
T KOG2270|consen  214 EKEMRNLKRLNNAGIPCPEPILL--KNHVLVMEFLGRDGWAAPK-LKDASLSTSKARELYQQCVRIMRRLYQKCR--LVH  288 (520)
T ss_pred             HHHHHHHHHHHhcCCCCCCceee--ecceEeeeeccCCCCcCcc-cccccCChHHHHHHHHHHHHHHHHHHHHhc--eec
Confidence            46888888887766442221111  1236899999543221111 112346777788888888888888876543  999


Q ss_pred             ccCCCCCeEEcCCCcEEEeccCCcccC
Q 021891           83 RDFKTSNILLDADYNAKLSDFGLAKDG  109 (306)
Q Consensus        83 ~dlkp~Nill~~~~~~kl~Dfg~a~~~  109 (306)
                      .||.--|+|+ .+|.+.|+|.+-+...
T Consensus       289 ADLSEfN~Ly-hdG~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  289 ADLSEFNLLY-HDGKLYIIDVSQSVEH  314 (520)
T ss_pred             cchhhhhheE-ECCEEEEEEccccccC
Confidence            9999999999 5678999998877653


No 485
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.35  E-value=0.014  Score=46.28  Aligned_cols=28  Identities=25%  Similarity=0.318  Sum_probs=25.4

Q ss_pred             eEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           80 VIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      .+|+|+.|.|++++++| ++|+||+.+..
T Consensus        79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            79999999999998877 88999999865


No 486
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=95.33  E-value=0.038  Score=46.84  Aligned_cols=49  Identities=18%  Similarity=0.097  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           59 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        59 ~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ...+..+-.++.-.+... .-++|+|+.|+|++.++.+.++|+||..|..
T Consensus       135 ~~~~~~l~~~l~~~~~~~-~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         135 RKKLKELRRALEEVPKDD-LVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             HHHHHHHHHHhhhcCCCc-eeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            334555555555555541 2389999999999999989999999998865


No 487
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=95.23  E-value=0.031  Score=48.36  Aligned_cols=31  Identities=35%  Similarity=0.412  Sum_probs=27.1

Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..++|+|+++.||+++.++.+.|+||+.+..
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            4599999999999999888778999998754


No 488
>PRK05231 homoserine kinase; Provisional
Probab=95.13  E-value=0.049  Score=47.36  Aligned_cols=31  Identities=32%  Similarity=0.421  Sum_probs=26.2

Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..+||+|+++.||+++.+...-|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            4599999999999998766568999998754


No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.79  E-value=0.071  Score=46.13  Aligned_cols=30  Identities=27%  Similarity=0.344  Sum_probs=25.3

Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..++|+|+++.||+++. +.+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            34899999999999987 6688999987653


No 490
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=94.62  E-value=0.02  Score=46.57  Aligned_cols=30  Identities=33%  Similarity=0.403  Sum_probs=21.2

Q ss_pred             CeEeccCCCCCeEE-cCCCcEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILL-DADYNAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill-~~~~~~kl~Dfg~a~~  108 (306)
                      .++|+||.+.||++ +.++.++++||..+..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            38999999999999 8889999999998753


No 491
>PF13095 FTA2:  Kinetochore Sim4 complex subunit FTA2
Probab=94.62  E-value=0.17  Score=40.70  Aligned_cols=83  Identities=30%  Similarity=0.434  Sum_probs=55.4

Q ss_pred             HHHHHHHHhcC---CCCcc--cceeeEEEeC------------------CeeEEEEEcCCCCCHHHHhhcCCCCCCHHHH
Q 021891            2 WQAEVNFLGDL---VHLNL--VKLIGYCIED------------------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIR   58 (306)
Q Consensus         2 ~~~E~~il~~l---~H~ni--v~~~~~~~~~------------------~~~~lv~e~~~~~sL~~~l~~~~~~l~~~~~   58 (306)
                      |-.|-+-..+|   .+.++  |+++||..-.                  ....||.||++...          .+.... 
T Consensus       101 F~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~-  169 (207)
T PF13095_consen  101 FNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRD-  169 (207)
T ss_pred             HHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhH-
Confidence            44555544444   45566  8899887432                  12357888776543          122233 


Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEcCCCcEEEeccCCc
Q 021891           59 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLA  106 (306)
Q Consensus        59 ~~~~~qi~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a  106 (306)
                         +.++..-|..+|..+   |+-+|+++.|..   +  =||+|||.+
T Consensus       170 ---~~~~~~dl~~~~k~g---I~~~Dv~~~ny~---~--G~lvDfs~~  206 (207)
T PF13095_consen  170 ---IPQMLRDLKILHKLG---IVPRDVKPRNYR---G--GKLVDFSSS  206 (207)
T ss_pred             ---HHHHHHHHHHHHHCC---eeeccCcccccc---C--CEEEecccC
Confidence               456777788999999   999999999986   2  378899864


No 492
>PHA03111 Ser/Thr kinase; Provisional
Probab=94.47  E-value=0.06  Score=46.42  Aligned_cols=80  Identities=18%  Similarity=0.104  Sum_probs=45.4

Q ss_pred             eeEEEEEcCCCCCHHHH----hhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC-CCCeEeccCCCCCeEEcCCC-------
Q 021891           29 QRLLVYEFMPRGSLENH----LFRRSLPLPWSIRMKIALGAAKGLAFLHEEA-ERPVIYRDFKTSNILLDADY-------   96 (306)
Q Consensus        29 ~~~lv~e~~~~~sL~~~----l~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-~~~iiH~dlkp~Nill~~~~-------   96 (306)
                      .-.+|+.++.+ +-.+.    ..+.+-.--.+-++.++.||+.-.-..-+.. ....+|.||||+|||+-+..       
T Consensus       249 GnIIIfPLArc-Sadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~  327 (444)
T PHA03111        249 GNIIIFPLARC-SADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITL  327 (444)
T ss_pred             CcEEEEehhhc-ccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEE
Confidence            34577887643 22221    1122322234567788888865442332211 12389999999999994332       


Q ss_pred             -----------cEEEeccCCcccC
Q 021891           97 -----------NAKLSDFGLAKDG  109 (306)
Q Consensus        97 -----------~~kl~Dfg~a~~~  109 (306)
                                 .++|.||.+++..
T Consensus       328 ~~~~~vF~Epi~~~LnDFDfSqv~  351 (444)
T PHA03111        328 KDATYVFNEPIKACLNDFDFSQVA  351 (444)
T ss_pred             CCeEEEeccchhhhhcccCHHHHc
Confidence                       2567777777653


No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=93.87  E-value=0.16  Score=44.38  Aligned_cols=29  Identities=31%  Similarity=0.468  Sum_probs=25.5

Q ss_pred             eEeccCCCCCeEEcCCCc-EEEeccCCccc
Q 021891           80 VIYRDFKTSNILLDADYN-AKLSDFGLAKD  108 (306)
Q Consensus        80 iiH~dlkp~Nill~~~~~-~kl~Dfg~a~~  108 (306)
                      +||+|+.|.||+++.+.. +.+.||+-+..
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            899999999999998874 88999997653


No 494
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=93.87  E-value=0.088  Score=45.64  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=44.4

Q ss_pred             EEEEEcCCCCCHHHH---hh-cCCCCCCHHHHHHHHHHHHHHHHH--hhcC-CCCCeEeccCCCCCeEEcCCC-------
Q 021891           31 LLVYEFMPRGSLENH---LF-RRSLPLPWSIRMKIALGAAKGLAF--LHEE-AERPVIYRDFKTSNILLDADY-------   96 (306)
Q Consensus        31 ~lv~e~~~~~sL~~~---l~-~~~~~l~~~~~~~~~~qi~~~l~~--LH~~-~~~~iiH~dlkp~Nill~~~~-------   96 (306)
                      .+|+.++.+ +-.+.   .. +.+-..-.+-++.++.||+.  -|  .-+. +....+|.||||+|||+-+..       
T Consensus       247 IIIfPLA~~-Sadkv~~~~~~e~GF~s~~~YvkfifLQiaL--LyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~  323 (434)
T PF05445_consen  247 IIIFPLARC-SADKVTESNAAELGFKSNVEYVKFIFLQIAL--LYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKF  323 (434)
T ss_pred             EEEEehhhc-chhhcCHHHHHhcCchhHHHHHHHHHHHHHH--HHeeeecCCCcceeeecccCcCcEEEecCCCceEEEE
Confidence            478887643 32221   11 12222334566778888854  44  2222 112389999999999994321       


Q ss_pred             -----------cEEEeccCCcccC
Q 021891           97 -----------NAKLSDFGLAKDG  109 (306)
Q Consensus        97 -----------~~kl~Dfg~a~~~  109 (306)
                                 .++|.||.+++..
T Consensus       324 ~~~~~vF~Epi~~~LnDFDfSqv~  347 (434)
T PF05445_consen  324 GNRNYVFKEPIRCCLNDFDFSQVA  347 (434)
T ss_pred             CCeEEEecccceeeecccCHHHhc
Confidence                       2678888888764


No 495
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=93.66  E-value=0.2  Score=40.21  Aligned_cols=30  Identities=27%  Similarity=0.326  Sum_probs=25.1

Q ss_pred             CeEeccCCCCCeEEcCCC-----cEEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDADY-----NAKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~-----~~kl~Dfg~a~~  108 (306)
                      .++|+|+.+.||++..++     .+.+.||..++.
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            489999999999997543     589999988764


No 496
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=93.23  E-value=0.14  Score=44.40  Aligned_cols=31  Identities=16%  Similarity=0.170  Sum_probs=27.7

Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..++|+|+.+.|++++.++.+.++||..+..
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            3499999999999999999999999988765


No 497
>PF03881 Fructosamin_kin:  Fructosamine kinase;  InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=92.80  E-value=0.091  Score=44.97  Aligned_cols=40  Identities=30%  Similarity=0.517  Sum_probs=26.4

Q ss_pred             CHHHHHHHHhcCC--C-CcccceeeEEEeCCeeEEEEEcCCCC
Q 021891            1 MWQAEVNFLGDLV--H-LNLVKLIGYCIEDDQRLLVYEFMPRG   40 (306)
Q Consensus         1 ~~~~E~~il~~l~--H-~niv~~~~~~~~~~~~~lv~e~~~~~   40 (306)
                      +|+.|++-|+.|.  . -.+.+++++....+..+|||||++.+
T Consensus        55 ~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   55 MFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             HHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             HHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            4788999999883  3 35779999988888889999998766


No 498
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=92.78  E-value=0.096  Score=44.62  Aligned_cols=30  Identities=30%  Similarity=0.401  Sum_probs=25.1

Q ss_pred             CeEeccCCCCCeEEcCCCc-EEEeccCCccc
Q 021891           79 PVIYRDFKTSNILLDADYN-AKLSDFGLAKD  108 (306)
Q Consensus        79 ~iiH~dlkp~Nill~~~~~-~kl~Dfg~a~~  108 (306)
                      .++|+|+++.||+++.++. .-|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            3899999999999987555 46999998764


No 499
>PRK06148 hypothetical protein; Provisional
Probab=92.11  E-value=0.33  Score=49.18  Aligned_cols=31  Identities=45%  Similarity=0.493  Sum_probs=25.9

Q ss_pred             CCeEeccCCCCCeEEcCCC--cEE-EeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADY--NAK-LSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~--~~k-l~Dfg~a~~  108 (306)
                      ..+||+|+++.||+++.++  .+. |+|||-+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            4499999999999998775  554 999998764


No 500
>PRK11768 serine/threonine protein kinase; Provisional
Probab=90.33  E-value=0.51  Score=41.24  Aligned_cols=29  Identities=24%  Similarity=0.241  Sum_probs=23.8

Q ss_pred             CCeEeccCCCCCeEEcCCCcEEEeccCCccc
Q 021891           78 RPVIYRDFKTSNILLDADYNAKLSDFGLAKD  108 (306)
Q Consensus        78 ~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~  108 (306)
                      ..+||+|+.+.||+++ + .+.|+||+-+..
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~  224 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARM  224 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence            3489999999999995 4 578899997753


Done!