Query 021892
Match_columns 306
No_of_seqs 311 out of 927
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:53:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmw_A Uncharacterized protein 99.9 6E-24 2.1E-28 180.4 4.9 105 106-233 5-110 (150)
2 2xcm_C SGT1-like protein, cyto 99.9 1.7E-22 6E-27 156.6 9.9 91 104-194 1-91 (92)
3 1ejf_A Progesterone receptor P 99.9 6.2E-23 2.1E-27 168.9 7.0 103 107-232 5-109 (125)
4 1wh0_A Ubiquitin carboxyl-term 99.9 5.3E-22 1.8E-26 165.3 9.5 92 104-195 18-122 (134)
5 1rl1_A Suppressor of G2 allele 99.8 2.5E-21 8.6E-26 156.3 9.6 95 103-197 7-101 (114)
6 1x5m_A Calcyclin-binding prote 99.8 1E-20 3.5E-25 156.1 12.6 92 105-196 20-116 (127)
7 2cg9_X CO-chaperone protein SB 99.8 2.8E-22 9.6E-27 167.0 1.4 104 106-232 7-126 (134)
8 2o30_A Nuclear movement protei 99.8 3.6E-19 1.2E-23 147.5 9.5 86 106-195 5-91 (131)
9 1wgv_A KIAA1068 protein; CS do 99.7 7.5E-18 2.6E-22 138.3 11.2 91 106-196 20-113 (124)
10 2jtt_C Calcyclin-binding prote 99.7 4.6E-19 1.6E-23 112.9 1.5 33 243-275 3-35 (35)
11 2rh0_A NUDC domain-containing 99.7 3.8E-16 1.3E-20 133.2 10.5 86 105-194 13-103 (157)
12 1wfi_A Nuclear distribution ge 99.6 8.4E-16 2.9E-20 127.1 11.3 88 106-196 8-100 (131)
13 3qor_A Nuclear migration prote 99.6 2.1E-15 7.2E-20 123.2 10.2 89 106-197 17-110 (121)
14 3gla_A Low molecular weight he 98.1 3.7E-05 1.3E-09 59.6 11.0 79 106-184 5-98 (100)
15 4fei_A Heat shock protein-rela 97.9 0.0001 3.5E-09 57.5 11.2 80 106-185 7-96 (102)
16 3rkv_A Putative peptidylprolyl 97.9 8.4E-06 2.9E-10 66.4 4.5 52 1-52 96-148 (162)
17 3aab_A Putative uncharacterize 97.8 0.00015 5E-09 58.5 10.3 80 106-185 25-117 (123)
18 2hr2_A Hypothetical protein; a 97.8 4.5E-06 1.5E-10 70.9 0.6 49 4-52 104-152 (159)
19 2k8q_A Protein SHQ1; beta-sand 97.8 3E-05 1E-09 63.8 5.5 83 106-193 4-92 (134)
20 3eud_A Protein SHQ1; CS domain 97.6 0.00044 1.5E-08 55.2 10.0 82 106-192 18-105 (115)
21 1gme_A Heat shock protein 16.9 97.6 0.00044 1.5E-08 57.9 9.9 80 106-185 44-139 (151)
22 2wj5_A Heat shock protein beta 97.5 0.00042 1.4E-08 54.0 8.9 77 108-184 4-89 (101)
23 4gco_A Protein STI-1; structur 97.5 8.5E-05 2.9E-09 58.9 4.3 44 2-45 81-124 (126)
24 4eld_A MJ16.5-P1, small heat s 97.5 0.00079 2.7E-08 56.7 10.2 78 108-185 59-152 (161)
25 3l1e_A Alpha-crystallin A chai 97.3 0.0014 4.7E-08 51.5 9.3 78 108-185 5-91 (106)
26 3upv_A Heat shock protein STI1 97.2 0.00017 6E-09 55.7 2.9 48 2-49 72-125 (126)
27 3q9p_A Heat shock protein beta 97.1 0.0038 1.3E-07 46.9 9.7 73 111-183 3-84 (85)
28 3sz7_A HSC70 cochaperone (SGT) 97.1 0.0007 2.4E-08 54.9 5.8 51 2-52 79-131 (164)
29 2fbn_A 70 kDa peptidylprolyl i 97.0 0.00075 2.6E-08 56.5 5.1 52 1-52 121-172 (198)
30 2y1y_A Alpha-crystallin B chai 96.9 0.0022 7.7E-08 48.7 7.1 73 112-184 3-84 (90)
31 1ihg_A Cyclophilin 40; ppiase 96.9 0.00081 2.8E-08 63.4 5.3 52 1-52 306-357 (370)
32 2vgx_A Chaperone SYCD; alterna 96.9 0.00086 2.9E-08 54.4 4.7 51 2-52 89-139 (148)
33 1kt0_A FKBP51, 51 kDa FK506-bi 96.8 0.001 3.5E-08 64.3 5.3 52 1-52 350-401 (457)
34 2xcb_A PCRH, regulatory protei 96.8 0.00093 3.2E-08 53.1 4.0 51 2-52 86-136 (142)
35 4gco_A Protein STI-1; structur 96.7 0.0015 5.3E-08 51.4 4.3 49 2-50 13-61 (126)
36 2if4_A ATFKBP42; FKBP-like, al 96.6 0.00079 2.7E-08 62.3 2.7 51 1-51 263-313 (338)
37 2klr_A Alpha-crystallin B chai 96.6 0.0046 1.6E-07 53.0 7.2 78 108-185 66-152 (175)
38 1p5q_A FKBP52, FK506-binding p 96.5 0.0023 7.9E-08 59.0 5.2 52 1-52 229-280 (336)
39 2l6j_A TPR repeat-containing p 96.5 0.004 1.4E-07 46.0 5.6 34 2-35 38-71 (111)
40 4gcn_A Protein STI-1; structur 96.5 0.0016 5.5E-08 51.2 3.5 44 2-46 83-126 (127)
41 3ma5_A Tetratricopeptide repea 96.5 0.0027 9.4E-08 47.6 4.5 49 1-49 6-54 (100)
42 4gcn_A Protein STI-1; structur 96.4 0.0026 8.9E-08 50.0 4.3 47 2-48 8-54 (127)
43 3q49_B STIP1 homology and U bo 96.4 0.0019 6.6E-08 49.8 3.3 50 2-51 77-131 (137)
44 1elr_A TPR2A-domain of HOP; HO 96.4 0.004 1.4E-07 46.7 5.0 50 2-52 79-128 (131)
45 3vtx_A MAMA; tetratricopeptide 96.3 0.0029 1E-07 51.6 4.2 46 1-46 4-49 (184)
46 2dba_A Smooth muscle cell asso 96.3 0.0036 1.2E-07 48.4 4.2 42 3-44 100-141 (148)
47 1pc2_A Mitochondria fission pr 96.2 0.0052 1.8E-07 51.6 5.1 51 2-52 71-121 (152)
48 2bol_A TSP36, small heat shock 96.2 0.017 5.9E-07 53.9 9.0 81 106-186 99-191 (314)
49 1na3_A Designed protein CTPR2; 96.2 0.0069 2.3E-07 43.0 5.0 41 3-43 10-50 (91)
50 1zu2_A Mitochondrial import re 96.1 0.004 1.4E-07 52.6 3.9 51 1-51 79-140 (158)
51 2kc7_A BFR218_protein; tetratr 96.1 0.0051 1.7E-07 45.0 4.1 38 4-41 37-74 (99)
52 2l6j_A TPR repeat-containing p 96.0 0.0063 2.2E-07 44.8 4.4 48 2-49 4-51 (111)
53 3k9i_A BH0479 protein; putativ 96.0 0.007 2.4E-07 46.2 4.8 50 2-51 27-76 (117)
54 1hxi_A PEX5, peroxisome target 96.0 0.0082 2.8E-07 46.7 5.3 50 1-50 50-99 (121)
55 1elw_A TPR1-domain of HOP; HOP 96.0 0.0072 2.5E-07 44.3 4.5 42 3-44 39-80 (118)
56 3gyz_A Chaperone protein IPGC; 96.0 0.0062 2.1E-07 50.1 4.4 44 2-45 70-113 (151)
57 2vyi_A SGTA protein; chaperone 96.0 0.0074 2.5E-07 45.0 4.5 46 3-48 81-126 (131)
58 4ga2_A E3 SUMO-protein ligase 95.9 0.0081 2.8E-07 48.4 5.0 44 2-45 65-108 (150)
59 3upv_A Heat shock protein STI1 95.9 0.0075 2.6E-07 46.2 4.4 39 2-40 38-76 (126)
60 2lni_A Stress-induced-phosphop 95.9 0.0075 2.6E-07 45.5 4.3 35 3-37 51-85 (133)
61 3k9i_A BH0479 protein; putativ 95.9 0.0046 1.6E-07 47.2 3.1 45 2-46 61-105 (117)
62 2v5f_A Prolyl 4-hydroxylase su 95.8 0.011 3.9E-07 45.0 5.2 51 2-52 46-96 (104)
63 2xcb_A PCRH, regulatory protei 95.7 0.0096 3.3E-07 47.1 4.5 45 2-46 52-96 (142)
64 1a17_A Serine/threonine protei 95.7 0.012 4.1E-07 46.3 5.1 49 2-50 81-129 (166)
65 2vgx_A Chaperone SYCD; alterna 95.5 0.012 4.2E-07 47.4 4.5 45 2-46 55-99 (148)
66 4ga2_A E3 SUMO-protein ligase 95.5 0.0099 3.4E-07 47.9 3.7 49 2-50 31-79 (150)
67 3sz7_A HSC70 cochaperone (SGT) 95.4 0.014 4.8E-07 47.0 4.4 45 2-46 45-89 (164)
68 2kat_A Uncharacterized protein 95.3 0.023 7.8E-07 42.8 5.0 44 2-45 19-62 (115)
69 2xev_A YBGF; tetratricopeptide 95.2 0.02 6.8E-07 43.4 4.6 44 3-46 40-86 (129)
70 1nzn_A CGI-135 protein, fissio 95.2 0.023 7.9E-07 46.1 5.1 49 3-51 75-123 (126)
71 2xev_A YBGF; tetratricopeptide 95.2 0.018 6.3E-07 43.5 4.3 35 2-36 2-36 (129)
72 3gyz_A Chaperone protein IPGC; 95.2 0.013 4.6E-07 48.0 3.7 48 2-49 36-83 (151)
73 2kck_A TPR repeat; tetratricop 95.2 0.023 7.8E-07 41.2 4.6 34 3-36 7-40 (112)
74 1na3_A Designed protein CTPR2; 95.1 0.022 7.4E-07 40.3 4.3 45 2-46 43-87 (91)
75 3q49_B STIP1 homology and U bo 95.1 0.021 7.2E-07 43.7 4.4 41 3-43 44-84 (137)
76 2kck_A TPR repeat; tetratricop 95.1 0.029 1E-06 40.6 5.0 44 2-45 40-85 (112)
77 3rkv_A Putative peptidylprolyl 94.9 0.017 5.7E-07 46.4 3.5 48 2-49 63-110 (162)
78 3o48_A Mitochondria fission 1 94.8 0.04 1.4E-06 45.2 5.5 50 3-52 79-128 (134)
79 2e2e_A Formate-dependent nitri 94.6 0.044 1.5E-06 44.2 5.4 46 2-47 115-160 (177)
80 1y8m_A FIS1; mitochondria, unk 94.6 0.052 1.8E-06 45.0 5.7 50 3-52 78-127 (144)
81 3vtx_A MAMA; tetratricopeptide 94.4 0.036 1.2E-06 44.9 4.4 48 2-49 107-154 (184)
82 1na0_A Designed protein CTPR3; 94.4 0.052 1.8E-06 39.8 5.0 35 3-37 44-78 (125)
83 1elw_A TPR1-domain of HOP; HOP 94.4 0.051 1.7E-06 39.6 4.8 47 2-48 4-50 (118)
84 4i17_A Hypothetical protein; T 94.3 0.039 1.3E-06 46.4 4.4 48 2-49 7-55 (228)
85 2lni_A Stress-induced-phosphop 94.2 0.051 1.8E-06 40.7 4.6 40 3-42 17-56 (133)
86 1wao_1 Serine/threonine protei 94.2 0.042 1.4E-06 53.3 5.1 50 2-51 74-123 (477)
87 2kc7_A BFR218_protein; tetratr 94.1 0.054 1.8E-06 39.3 4.4 45 5-49 3-48 (99)
88 2dba_A Smooth muscle cell asso 94.1 0.06 2E-06 41.2 4.8 40 3-42 66-105 (148)
89 3ma5_A Tetratricopeptide repea 94.0 0.015 5.1E-07 43.4 1.2 50 2-52 41-90 (100)
90 1elr_A TPR2A-domain of HOP; HO 93.9 0.069 2.4E-06 39.6 4.8 45 2-46 4-48 (131)
91 3urz_A Uncharacterized protein 93.6 0.054 1.8E-06 45.7 4.1 42 2-43 88-129 (208)
92 2e2e_A Formate-dependent nitri 93.5 0.05 1.7E-06 43.9 3.5 44 2-45 44-87 (177)
93 2kat_A Uncharacterized protein 93.4 0.064 2.2E-06 40.2 3.8 51 2-52 53-105 (115)
94 2y4t_A DNAJ homolog subfamily 93.4 0.097 3.3E-06 48.2 5.7 51 2-52 329-379 (450)
95 4i17_A Hypothetical protein; T 93.3 0.077 2.6E-06 44.6 4.5 37 2-38 76-112 (228)
96 2vyi_A SGTA protein; chaperone 93.3 0.092 3.2E-06 38.8 4.4 34 3-36 47-80 (131)
97 2fbn_A 70 kDa peptidylprolyl i 93.2 0.09 3.1E-06 43.5 4.8 47 3-49 89-135 (198)
98 2pl2_A Hypothetical conserved 93.2 0.088 3E-06 44.6 4.8 48 1-48 4-51 (217)
99 2hr2_A Hypothetical protein; a 93.1 0.036 1.2E-06 46.7 2.1 37 3-41 58-101 (159)
100 3urz_A Uncharacterized protein 93.1 0.078 2.7E-06 44.6 4.2 42 8-49 60-101 (208)
101 1a17_A Serine/threonine protei 93.1 0.095 3.2E-06 40.9 4.4 44 2-45 47-90 (166)
102 2c2l_A CHIP, carboxy terminus 93.1 0.044 1.5E-06 48.8 2.7 34 2-35 72-105 (281)
103 2pl2_A Hypothetical conserved 93.0 0.11 3.6E-06 44.1 5.0 49 1-49 38-86 (217)
104 1hxi_A PEX5, peroxisome target 92.9 0.093 3.2E-06 40.5 4.1 45 4-48 19-63 (121)
105 4abn_A Tetratricopeptide repea 92.8 0.11 3.6E-06 50.1 5.3 51 1-51 257-307 (474)
106 1hh8_A P67PHOX, NCF-2, neutrop 92.6 0.13 4.3E-06 42.4 4.8 35 2-36 71-105 (213)
107 3bee_A Putative YFRE protein; 92.6 0.17 5.8E-06 38.0 5.1 36 1-36 42-77 (93)
108 1hh8_A P67PHOX, NCF-2, neutrop 92.6 0.11 3.9E-06 42.7 4.4 43 2-44 37-79 (213)
109 3hym_B Cell division cycle pro 92.2 0.1 3.5E-06 45.4 3.9 42 4-45 238-279 (330)
110 1na0_A Designed protein CTPR3; 92.0 0.16 5.6E-06 37.0 4.3 44 2-45 9-52 (125)
111 3qky_A Outer membrane assembly 92.0 0.16 5.6E-06 43.6 4.9 46 2-47 15-63 (261)
112 2fo7_A Synthetic consensus TPR 91.9 0.19 6.4E-06 37.0 4.6 37 2-38 1-37 (136)
113 3u4t_A TPR repeat-containing p 91.9 0.14 4.7E-06 43.6 4.3 46 1-46 2-47 (272)
114 1kt0_A FKBP51, 51 kDa FK506-bi 91.8 0.12 4.2E-06 49.5 4.2 45 2-46 317-361 (457)
115 1xnf_A Lipoprotein NLPI; TPR, 91.8 0.15 5E-06 43.3 4.3 44 2-45 111-154 (275)
116 1ihg_A Cyclophilin 40; ppiase 91.7 0.16 5.4E-06 47.5 4.8 48 2-49 273-320 (370)
117 3uq3_A Heat shock protein STI1 91.5 0.17 5.9E-06 42.2 4.4 43 3-45 174-216 (258)
118 2yhc_A BAMD, UPF0169 lipoprote 91.3 0.23 7.9E-06 42.0 5.1 35 3-37 42-76 (225)
119 1p5q_A FKBP52, FK506-binding p 91.3 0.16 5.5E-06 46.5 4.3 45 2-46 196-240 (336)
120 2c2l_A CHIP, carboxy terminus 91.3 0.18 6.1E-06 44.8 4.4 35 3-37 39-73 (281)
121 1xnf_A Lipoprotein NLPI; TPR, 90.7 0.23 8E-06 42.0 4.5 34 3-36 78-111 (275)
122 3u4t_A TPR repeat-containing p 90.6 0.24 8.2E-06 42.1 4.5 44 2-45 74-117 (272)
123 2pzi_A Probable serine/threoni 90.6 0.21 7.3E-06 50.4 4.8 48 2-49 467-514 (681)
124 2if4_A ATFKBP42; FKBP-like, al 90.6 0.15 5.1E-06 46.8 3.3 44 3-46 231-274 (338)
125 3as5_A MAMA; tetratricopeptide 90.2 0.3 1E-05 38.2 4.4 42 3-44 111-152 (186)
126 3qky_A Outer membrane assembly 90.2 0.27 9.3E-06 42.2 4.5 51 2-52 185-248 (261)
127 2h6f_A Protein farnesyltransfe 90.1 0.16 5.5E-06 47.9 3.2 34 3-36 132-166 (382)
128 2bol_A TSP36, small heat shock 90.1 0.98 3.4E-05 41.9 8.5 71 113-183 231-313 (314)
129 2h6f_A Protein farnesyltransfe 89.7 0.32 1.1E-05 45.8 5.0 34 3-36 98-131 (382)
130 3uq3_A Heat shock protein STI1 89.7 0.3 1E-05 40.7 4.3 46 2-47 139-184 (258)
131 2r5s_A Uncharacterized protein 89.5 0.49 1.7E-05 38.2 5.4 35 2-36 108-142 (176)
132 3ieg_A DNAJ homolog subfamily 89.3 0.31 1E-05 42.6 4.2 37 2-38 3-39 (359)
133 4eqf_A PEX5-related protein; a 89.1 0.41 1.4E-05 42.8 5.0 48 2-49 247-294 (365)
134 1wao_1 Serine/threonine protei 89.0 0.42 1.4E-05 46.1 5.3 44 2-45 40-83 (477)
135 3hym_B Cell division cycle pro 89.0 0.43 1.5E-05 41.3 4.9 44 2-45 270-313 (330)
136 3mkr_A Coatomer subunit epsilo 89.0 0.35 1.2E-05 43.2 4.4 38 2-39 200-237 (291)
137 3as5_A MAMA; tetratricopeptide 88.7 0.55 1.9E-05 36.6 5.0 35 3-37 43-77 (186)
138 2fo7_A Synthetic consensus TPR 88.6 0.5 1.7E-05 34.5 4.4 32 4-35 37-68 (136)
139 4gyw_A UDP-N-acetylglucosamine 88.5 0.34 1.2E-05 49.8 4.4 48 2-49 111-158 (723)
140 4gyw_A UDP-N-acetylglucosamine 88.5 0.34 1.2E-05 49.8 4.4 45 1-45 76-120 (723)
141 2vq2_A PILW, putative fimbrial 88.4 0.41 1.4E-05 38.9 4.1 44 2-45 8-51 (225)
142 1fch_A Peroxisomal targeting s 88.3 0.42 1.4E-05 42.4 4.4 36 3-38 99-134 (368)
143 3fp2_A TPR repeat-containing p 88.1 0.45 1.5E-05 44.6 4.8 47 2-48 59-105 (537)
144 1zu2_A Mitochondrial import re 88.1 0.18 6E-06 42.3 1.7 37 1-37 35-81 (158)
145 2yhc_A BAMD, UPF0169 lipoprote 88.0 0.47 1.6E-05 40.1 4.4 35 2-36 4-38 (225)
146 2r5s_A Uncharacterized protein 87.9 0.28 9.5E-06 39.7 2.8 37 2-39 40-76 (176)
147 2vq2_A PILW, putative fimbrial 87.8 0.49 1.7E-05 38.4 4.3 44 2-45 42-85 (225)
148 2q7f_A YRRB protein; TPR, prot 87.8 0.48 1.6E-05 39.2 4.3 44 2-45 57-100 (243)
149 4abn_A Tetratricopeptide repea 87.8 0.46 1.6E-05 45.6 4.6 46 2-50 137-182 (474)
150 4eqf_A PEX5-related protein; a 87.6 0.44 1.5E-05 42.6 4.2 41 3-43 66-106 (365)
151 3ieg_A DNAJ homolog subfamily 87.1 0.62 2.1E-05 40.6 4.8 44 2-45 37-80 (359)
152 2q7f_A YRRB protein; TPR, prot 87.0 0.47 1.6E-05 39.2 3.7 34 4-37 161-194 (243)
153 1fch_A Peroxisomal targeting s 86.9 0.68 2.3E-05 41.0 5.0 44 2-45 251-294 (368)
154 2gw1_A Mitochondrial precursor 86.7 0.52 1.8E-05 43.7 4.2 34 3-36 40-73 (514)
155 2ho1_A Type 4 fimbrial biogene 86.6 0.61 2.1E-05 39.0 4.3 37 3-39 72-108 (252)
156 3cv0_A Peroxisome targeting si 86.5 0.6 2E-05 40.3 4.3 37 2-38 55-91 (327)
157 1qqe_A Vesicular transport pro 86.5 0.33 1.1E-05 43.0 2.6 33 4-36 201-233 (292)
158 1w3b_A UDP-N-acetylglucosamine 86.2 0.71 2.4E-05 41.7 4.8 38 2-39 67-104 (388)
159 2vsy_A XCC0866; transferase, g 86.1 0.59 2E-05 45.3 4.4 48 2-49 91-138 (568)
160 2vsy_A XCC0866; transferase, g 86.0 0.61 2.1E-05 45.2 4.4 45 2-46 57-101 (568)
161 2ho1_A Type 4 fimbrial biogene 85.8 0.9 3.1E-05 37.9 5.0 33 4-36 143-175 (252)
162 2gw1_A Mitochondrial precursor 85.6 0.75 2.6E-05 42.6 4.7 43 2-45 6-48 (514)
163 3fp2_A TPR repeat-containing p 84.7 0.43 1.5E-05 44.8 2.6 49 2-50 25-73 (537)
164 2y4t_A DNAJ homolog subfamily 84.7 0.81 2.8E-05 41.8 4.4 37 2-38 60-96 (450)
165 3cv0_A Peroxisome targeting si 84.7 0.87 3E-05 39.2 4.4 44 2-45 206-249 (327)
166 3qou_A Protein YBBN; thioredox 84.5 1.1 3.6E-05 39.7 5.0 35 2-36 219-253 (287)
167 2pzi_A Probable serine/threoni 83.7 0.75 2.6E-05 46.3 4.1 45 2-46 433-477 (681)
168 3sf4_A G-protein-signaling mod 82.9 0.87 3E-05 40.6 3.8 36 2-37 9-44 (406)
169 2v5f_A Prolyl 4-hydroxylase su 81.9 1.3 4.3E-05 33.2 3.8 31 2-32 5-35 (104)
170 1qqe_A Vesicular transport pro 81.9 1.3 4.6E-05 38.9 4.6 36 2-37 158-193 (292)
171 4f3v_A ESX-1 secretion system 81.3 0.97 3.3E-05 41.2 3.5 31 4-34 210-240 (282)
172 1ouv_A Conserved hypothetical 81.2 1.4 4.8E-05 37.6 4.4 30 1-30 5-34 (273)
173 3bee_A Putative YFRE protein; 80.9 1.8 6E-05 32.2 4.3 47 1-47 5-54 (93)
174 3q15_A PSP28, response regulat 80.7 0.99 3.4E-05 41.0 3.3 33 2-34 141-173 (378)
175 4g1t_A Interferon-induced prot 80.7 1.6 5.4E-05 40.3 4.7 50 2-51 136-187 (472)
176 3ro3_A PINS homolog, G-protein 80.2 0.83 2.8E-05 34.5 2.2 31 3-33 10-40 (164)
177 1w3b_A UDP-N-acetylglucosamine 79.9 2.1 7.2E-05 38.5 5.2 35 3-37 238-272 (388)
178 2ond_A Cleavage stimulation fa 79.5 2.5 8.5E-05 37.3 5.5 47 2-49 99-145 (308)
179 3edt_B KLC 2, kinesin light ch 79.5 1.1 3.7E-05 37.5 3.0 30 2-31 127-156 (283)
180 3ulq_A Response regulator aspa 79.1 1.2 4E-05 40.4 3.3 34 2-35 143-176 (383)
181 3ro2_A PINS homolog, G-protein 79.1 1.4 4.8E-05 37.6 3.6 35 3-37 6-40 (338)
182 3ro3_A PINS homolog, G-protein 78.9 0.96 3.3E-05 34.1 2.2 31 2-32 89-119 (164)
183 4a1s_A PINS, partner of inscut 77.7 2.3 8E-05 38.3 4.8 36 2-37 48-83 (411)
184 3rjv_A Putative SEL1 repeat pr 77.3 1.3 4.5E-05 37.1 2.8 32 1-32 17-48 (212)
185 4g1t_A Interferon-induced prot 76.7 2.1 7.1E-05 39.5 4.2 45 2-46 247-291 (472)
186 3qou_A Protein YBBN; thioredox 76.5 2.1 7.2E-05 37.7 4.1 43 3-45 118-160 (287)
187 3ffl_A Anaphase-promoting comp 74.6 2.5 8.6E-05 35.7 3.8 51 2-52 63-138 (167)
188 2xpi_A Anaphase-promoting comp 74.0 2.4 8.4E-05 40.3 4.1 44 2-45 516-559 (597)
189 1b89_A Protein (clathrin heavy 73.9 3 0.0001 40.5 4.7 43 3-52 149-191 (449)
190 2ifu_A Gamma-SNAP; membrane fu 73.4 1.9 6.4E-05 38.2 2.9 32 3-35 196-227 (307)
191 2qfc_A PLCR protein; TPR, HTH, 73.4 1.5 5.2E-05 38.4 2.2 30 3-32 197-226 (293)
192 2qfc_A PLCR protein; TPR, HTH, 73.1 2.1 7.1E-05 37.5 3.1 35 2-36 155-192 (293)
193 3u3w_A Transcriptional activat 72.1 1.7 5.8E-05 38.1 2.2 32 2-33 196-227 (293)
194 1klx_A Cysteine rich protein B 71.6 2.4 8.2E-05 33.2 2.9 33 1-33 56-92 (138)
195 3mkr_A Coatomer subunit epsilo 71.5 3.7 0.00013 36.3 4.4 35 2-36 130-164 (291)
196 3edt_B KLC 2, kinesin light ch 71.2 3.8 0.00013 34.0 4.2 31 2-32 43-73 (283)
197 3q15_A PSP28, response regulat 70.5 2.3 8E-05 38.5 2.9 28 3-30 223-250 (378)
198 3ulq_A Response regulator aspa 70.5 2.8 9.5E-05 37.9 3.4 29 3-31 225-253 (383)
199 3nf1_A KLC 1, kinesin light ch 70.1 2.6 8.9E-05 35.8 3.0 30 2-31 153-182 (311)
200 3gw4_A Uncharacterized protein 68.8 2.3 7.9E-05 33.9 2.2 30 2-31 66-95 (203)
201 2ifu_A Gamma-SNAP; membrane fu 67.6 2.4 8.2E-05 37.5 2.2 34 2-35 155-188 (307)
202 3u3w_A Transcriptional activat 67.2 2.5 8.5E-05 36.9 2.2 28 3-30 156-183 (293)
203 1ouv_A Conserved hypothetical 66.5 3.5 0.00012 35.1 3.0 32 2-33 182-217 (273)
204 3rjv_A Putative SEL1 repeat pr 66.4 3.9 0.00013 34.1 3.2 33 2-34 85-121 (212)
205 3n71_A Histone lysine methyltr 66.3 7.1 0.00024 38.0 5.5 49 2-50 393-449 (490)
206 3gw4_A Uncharacterized protein 65.4 2.8 9.5E-05 33.4 2.0 31 2-32 107-137 (203)
207 2w2u_A Hypothetical P60 katani 65.0 11 0.00038 27.8 5.1 50 2-51 19-75 (83)
208 2xpi_A Anaphase-promoting comp 62.2 8.5 0.00029 36.4 5.1 34 3-36 374-407 (597)
209 2v6y_A AAA family ATPase, P60 61.6 14 0.00049 27.1 5.2 51 2-52 11-68 (83)
210 3ro2_A PINS homolog, G-protein 61.4 4.8 0.00016 34.1 2.9 33 2-34 83-115 (338)
211 3nf1_A KLC 1, kinesin light ch 60.5 8.1 0.00028 32.6 4.2 30 2-31 69-98 (311)
212 1wfd_A Hypothetical protein 15 60.0 12 0.0004 28.1 4.6 50 2-51 15-71 (93)
213 3sf4_A G-protein-signaling mod 59.7 4.1 0.00014 36.1 2.2 29 3-31 48-76 (406)
214 4a1s_A PINS, partner of inscut 59.5 4.3 0.00015 36.4 2.4 30 2-31 126-155 (411)
215 2ond_A Cleavage stimulation fa 58.9 12 0.0004 32.8 5.1 46 2-47 203-250 (308)
216 2ooe_A Cleavage stimulation fa 57.9 11 0.00039 35.7 5.2 46 2-48 321-366 (530)
217 3qwp_A SET and MYND domain-con 57.4 4.5 0.00016 38.6 2.2 29 2-30 371-399 (429)
218 2oo2_A Hypothetical protein AF 56.1 5.3 0.00018 30.0 1.9 29 1-29 34-62 (86)
219 2pmr_A Uncharacterized protein 55.7 5.4 0.00018 30.0 1.9 29 1-29 38-66 (87)
220 2vkj_A TM1634; membrane protei 55.7 16 0.00054 27.8 4.4 46 5-50 56-104 (106)
221 4f3v_A ESX-1 secretion system 54.8 13 0.00043 33.7 4.7 29 3-31 172-200 (282)
222 2v6x_A Vacuolar protein sortin 54.6 17 0.00058 26.5 4.6 50 2-51 13-69 (85)
223 3mv2_B Coatomer subunit epsilo 54.1 16 0.00055 33.5 5.3 48 4-51 102-149 (310)
224 3ly7_A Transcriptional activat 53.7 8.2 0.00028 36.5 3.3 31 3-33 278-308 (372)
225 2xm6_A Protein corresponding t 53.7 6.2 0.00021 37.1 2.5 33 2-34 399-435 (490)
226 4a5x_A MITD1, MIT domain-conta 52.1 20 0.00067 26.5 4.6 49 3-51 17-72 (86)
227 2ooe_A Cleavage stimulation fa 50.0 19 0.00065 34.1 5.3 45 2-49 46-90 (530)
228 3dra_A Protein farnesyltransfe 49.3 11 0.00037 34.3 3.3 42 2-45 67-110 (306)
229 2cpt_A SKD1 protein, vacuolar 47.7 24 0.00081 27.7 4.6 30 2-31 18-47 (117)
230 3e4b_A ALGK; tetratricopeptide 46.4 17 0.00058 34.1 4.3 36 2-37 176-214 (452)
231 3qww_A SET and MYND domain-con 44.5 27 0.00093 33.2 5.4 50 2-51 340-394 (433)
232 1xi4_A Clathrin heavy chain; a 43.6 17 0.00058 40.6 4.2 47 2-49 1134-1180(1630)
233 1sz9_A PCF11 protein; RNA poly 42.4 16 0.00054 29.7 2.9 25 247-271 85-109 (144)
234 2cwy_A Hypothetical protein TT 40.2 15 0.00052 27.6 2.3 29 5-33 4-32 (94)
235 2rpa_A Katanin P60 ATPase-cont 39.3 38 0.0013 24.7 4.3 47 5-52 15-68 (78)
236 1hz4_A MALT regulatory protein 37.2 17 0.00059 32.1 2.6 32 3-34 136-167 (373)
237 3r9m_A BRO1 domain-containing 36.7 15 0.00052 34.4 2.2 30 2-31 253-282 (376)
238 4b4t_Q 26S proteasome regulato 36.6 16 0.00056 32.8 2.4 30 3-32 176-205 (434)
239 2xm6_A Protein corresponding t 35.8 20 0.0007 33.5 3.0 29 3-31 76-108 (490)
240 1dce_A Protein (RAB geranylger 35.2 24 0.00084 34.6 3.5 35 2-36 63-107 (567)
241 4b4t_Q 26S proteasome regulato 34.8 15 0.00053 33.0 1.9 31 3-33 56-86 (434)
242 1xi4_A Clathrin heavy chain; a 33.7 32 0.0011 38.5 4.3 41 2-49 1221-1261(1630)
243 2crb_A Nuclear receptor bindin 32.7 24 0.00081 26.9 2.2 26 4-29 17-42 (97)
244 3n71_A Histone lysine methyltr 32.5 54 0.0019 31.7 5.5 49 2-50 351-404 (490)
245 3ly7_A Transcriptional activat 32.4 23 0.00078 33.5 2.6 37 2-38 310-346 (372)
246 3clj_A Protein NRD1; CTD-inter 31.0 25 0.00085 29.2 2.3 23 247-269 100-122 (157)
247 3u64_A Protein TP_0956; tetrat 30.0 28 0.00096 31.9 2.7 33 3-35 200-237 (301)
248 3rau_A Tyrosine-protein phosph 29.7 24 0.00081 33.0 2.2 30 2-31 252-281 (363)
249 3c3r_A Programmed cell death 6 28.7 25 0.00085 33.0 2.2 51 2-52 275-332 (380)
250 3e4b_A ALGK; tetratricopeptide 28.1 42 0.0014 31.4 3.7 30 3-32 319-352 (452)
251 3qwp_A SET and MYND domain-con 28.1 68 0.0023 30.2 5.2 50 2-51 329-383 (429)
252 4b4t_R RPN7, 26S proteasome re 27.7 27 0.00091 33.1 2.3 51 2-52 131-182 (429)
253 1b89_A Protein (clathrin heavy 26.4 16 0.00054 35.5 0.4 26 3-28 123-148 (449)
254 1dce_A Protein (RAB geranylger 26.2 37 0.0013 33.3 3.1 33 3-35 108-142 (567)
255 1hz4_A MALT regulatory protein 26.0 41 0.0014 29.6 3.1 33 3-35 15-47 (373)
256 3dra_A Protein farnesyltransfe 25.4 41 0.0014 30.3 3.0 37 2-38 180-222 (306)
257 3u64_A Protein TP_0956; tetrat 24.9 69 0.0024 29.3 4.4 47 3-49 240-288 (301)
258 2ijq_A Hypothetical protein; s 24.4 38 0.0013 28.1 2.3 32 4-35 34-65 (161)
259 3q7a_A Farnesyltransferase alp 24.1 95 0.0032 28.7 5.3 41 2-44 88-129 (349)
260 1zb1_A BRO1 protein; AIP1, BRO 22.9 28 0.00096 32.7 1.4 29 2-30 257-285 (392)
261 3t5x_A PCI domain-containing p 22.4 78 0.0027 26.8 4.1 31 5-35 17-47 (203)
262 3may_A RV0203, possible export 21.9 55 0.0019 25.1 2.6 32 247-278 31-62 (101)
263 2p58_C Putative type III secre 21.7 69 0.0024 24.9 3.1 39 8-51 46-84 (116)
264 4gns_B Protein CSD3, chitin bi 20.2 41 0.0014 34.7 2.0 13 248-264 586-598 (754)
265 2xs1_A Programmed cell death 6 20.2 44 0.0015 34.0 2.2 51 2-52 260-317 (704)
No 1
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.89 E-value=6e-24 Score=180.36 Aligned_cols=105 Identities=25% Similarity=0.356 Sum_probs=91.2
Q ss_pred CCeeeecCCCeEEEEEEecCCCCCccEEEee-ccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCCEEEEEEEeCC
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 184 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~-~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~KIEI~L~K~~ 184 (306)
++|+||||.+.|+|+|+++++ ++++|+|+ +++|+|++...+|..|.|.|+||++|+|+ |+|+|++++|+|+|+|++
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEECC
Confidence 479999999999999999987 68999999 78999998756678899999999999999 999999999999999999
Q ss_pred CCCCCceeeccCcccCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHHH
Q 021892 185 PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQV 233 (306)
Q Consensus 185 ~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yPss~~~~~DWdK~~~e~ 233 (306)
+.+|++|++... ..+.|. ++|||+|..|.
T Consensus 82 ~~~W~rL~k~~~---------------K~~~~l-----k~Dwdkw~ded 110 (150)
T 2kmw_A 82 RSWWTRLLKSEE---------------KPAPYI-----KVDWNKWCDED 110 (150)
T ss_dssp SSCCSCSBSCCS---------------SCCTTE-----EECSSSSCCSS
T ss_pred CCcCcccccCCc---------------ccCccc-----cccchhcCCch
Confidence 999999997532 113332 67999998653
No 2
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.88 E-value=1.7e-22 Score=156.64 Aligned_cols=91 Identities=77% Similarity=1.247 Sum_probs=85.2
Q ss_pred CCCCeeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCCEEEEEEEeC
Q 021892 104 PKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKA 183 (306)
Q Consensus 104 ~k~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~KIEI~L~K~ 183 (306)
+++||+||||.+.|+|+|+++|+.++++.|+|++++|+|++...++..|.++++||++|+|++|++++.+++|+|+|+|+
T Consensus 1 ~~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 1 AKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp CCSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred CCccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence 36799999999999999999999999999999999999998766677899999999999999999999999999999999
Q ss_pred CCCCCCceeec
Q 021892 184 EPIQWSSLEFS 194 (306)
Q Consensus 184 ~~~~W~~L~~~ 194 (306)
++++|++|++.
T Consensus 81 ~~~~W~~L~~~ 91 (92)
T 2xcm_C 81 DIITWASLEHG 91 (92)
T ss_dssp SSCCCSCSBTT
T ss_pred CCCcchhcccC
Confidence 98999999853
No 3
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.87 E-value=6.2e-23 Score=168.93 Aligned_cols=103 Identities=18% Similarity=0.268 Sum_probs=89.9
Q ss_pred CeeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEc-CCCceEEEcccccccccCCCceEEEeCCEEEEEEEeCCC
Q 021892 107 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDV-PGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 185 (306)
Q Consensus 107 r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~-~~~~~y~~~l~L~~~I~pe~s~~kv~~~KIEI~L~K~~~ 185 (306)
+|+||||.+.|+|+|+++++ +++.|+|++++|+|++.. .+|..|.+.++||++|+|++|+|+|.+++|+|+|+|+++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 79999999999999999986 799999999999999875 467789999999999999999999999999999999986
Q ss_pred -CCCCceeeccCcccCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 021892 186 -IQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 232 (306)
Q Consensus 186 -~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yPss~~~~~DWdK~~~e 232 (306)
.+|++|++... ++.+ -++|||||.+|
T Consensus 83 ~~~W~rL~~~~~----------------K~~~-----lk~D~dkw~de 109 (125)
T 1ejf_A 83 GQSWPRLTKERA----------------KLNW-----LSVDFNNWKDW 109 (125)
T ss_dssp TCCCSSSBSSCC----------------CCTT-----EEECTTTCCCC
T ss_pred CCCCCceecCCC----------------cccc-----ccCChHHhCCc
Confidence 59999997632 1222 26799999864
No 4
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.86 E-value=5.3e-22 Score=165.33 Aligned_cols=92 Identities=26% Similarity=0.481 Sum_probs=85.6
Q ss_pred CCCCeeeecC-CCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCCCc------------eEEEcccccccccCCCceEE
Q 021892 104 PKYRHEFYQK-PEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE------------AYHFQPRLFGKIIPAKCRYE 170 (306)
Q Consensus 104 ~k~r~dWyQt-~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~~~------------~y~~~l~L~~~I~pe~s~~k 170 (306)
..+||+|||| .+.|+|+|+++++.++++.|+|++++|+|.+...++. .|.|+++||++|+|++|+|+
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence 3689999999 9999999999999999999999999999999766554 79999999999999999999
Q ss_pred EeCCEEEEEEEeCCCCCCCceeecc
Q 021892 171 VLSTKVEIRLAKAEPIQWSSLEFSK 195 (306)
Q Consensus 171 v~~~KIEI~L~K~~~~~W~~L~~~~ 195 (306)
|.+++|+|+|+|+++.+|++|+...
T Consensus 98 v~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp ECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred EeCCEEEEEEEECCCCccccccccC
Confidence 9999999999999989999999764
No 5
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.85 E-value=2.5e-21 Score=156.27 Aligned_cols=95 Identities=35% Similarity=0.652 Sum_probs=86.8
Q ss_pred CCCCCeeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCCEEEEEEEe
Q 021892 103 RPKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAK 182 (306)
Q Consensus 103 ~~k~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~KIEI~L~K 182 (306)
.+.+||+||||.+.|+|+|+++|+.++++.|+|++++|+|++...++..|.+.++||++|+|++|+|++.+++|+|+|+|
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEEEEc
Confidence 35789999999999999999999999999999999999999886667889999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCc
Q 021892 183 AEPIQWSSLEFSKGA 197 (306)
Q Consensus 183 ~~~~~W~~L~~~~~~ 197 (306)
+++.+|++|++.+..
T Consensus 87 ~~~~~W~~L~~~~~~ 101 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDV 101 (114)
T ss_dssp SSCCCCSSSBTTC--
T ss_pred CCCCcCccccccCCc
Confidence 998999999976543
No 6
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=1e-20 Score=156.05 Aligned_cols=92 Identities=20% Similarity=0.229 Sum_probs=84.7
Q ss_pred CCCeeeecCCCeEEEEEEecCC---CCCccEEEeeccEEEEEEEcCCCceEEEcc-cccccccCCCceEEEeCCEEEEEE
Q 021892 105 KYRHEFYQKPEEVVVTVFAKGI---PAKNVTVDFGEQILSVSIDVPGEEAYHFQP-RLFGKIIPAKCRYEVLSTKVEIRL 180 (306)
Q Consensus 105 k~r~dWyQt~~~V~ItI~~k~v---~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l-~L~~~I~pe~s~~kv~~~KIEI~L 180 (306)
..||+||||.+.|+|+|+++++ +++++.|+|++++|+|.+...++..|.|++ +||++|+|++|+|+|.+++|+|+|
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L 99 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILC 99 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEEE
Confidence 4499999999999999999998 789999999999999999776778999999 599999999999999999999999
Q ss_pred EeCCCC-CCCceeeccC
Q 021892 181 AKAEPI-QWSSLEFSKG 196 (306)
Q Consensus 181 ~K~~~~-~W~~L~~~~~ 196 (306)
+|+++. +|++|+..+.
T Consensus 100 ~K~~~~~~W~~L~~~~~ 116 (127)
T 1x5m_A 100 RKKVENTRWDYLTQVEK 116 (127)
T ss_dssp ECSSSSCCCSSSBHHHH
T ss_pred EECCCCCCCCccccccc
Confidence 999875 9999997643
No 7
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.8e-22 Score=167.03 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=84.2
Q ss_pred CCeeeecCCCe-------EEEEEEecCCCCCccEEEeeccEEEEEEEcCC------CceEEEcccccccccCCCceEEEe
Q 021892 106 YRHEFYQKPEE-------VVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG------EEAYHFQPRLFGKIIPAKCRYEVL 172 (306)
Q Consensus 106 ~r~dWyQt~~~-------V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~------~~~y~~~l~L~~~I~pe~s~~kv~ 172 (306)
++|.||||.+. |+|+|+++++ .++.|+|++++|+|++...+ +..|.+.|+||++|+|++|++++.
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~ 84 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA 84 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC
Confidence 47999999988 9999999987 58999999999999876543 468999999999999999999999
Q ss_pred CCE-EEEEEEeCC--CCCCCceeeccCcccCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 021892 173 STK-VEIRLAKAE--PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 232 (306)
Q Consensus 173 ~~K-IEI~L~K~~--~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~yPss~~~~~DWdK~~~e 232 (306)
+++ |+|+|+|++ ..+|++|++... ++.| -++|||||.+|
T Consensus 85 ~~~~vei~L~K~~~~~~~W~rL~k~~~----------------K~~~-----lk~D~dkw~dE 126 (134)
T 2cg9_X 85 NGQHYFLKLYKKDLESEYWPRLTKEKV----------------KYPY-----IKTDFDKWVDA 126 (134)
T ss_dssp CC--CEEEEEECSSSSCCCSCSSSSCC----------------CCSS-----EEECTTTCCCS
T ss_pred CCEEEEEEEEECCCCCCCCCceecCCC----------------ccCc-----ccCCchhcCCc
Confidence 999 999999998 479999997632 1222 26799999864
No 8
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.78 E-value=3.6e-19 Score=147.54 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=74.7
Q ss_pred CCeeeecCCCeEEEEEEe-cCCCCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCCEEEEEEEeCC
Q 021892 106 YRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 184 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~-k~v~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~KIEI~L~K~~ 184 (306)
.+|.|+||.+.|+|+|++ ++++.+++.|+|++++|+|.+. |.+ .+.++||++|+|++|+|++.+++|+|+|.|+.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEEEEECC
Confidence 479999999999999998 6888999999999999999874 445 78899999999999999999999999999996
Q ss_pred CCCCCceeecc
Q 021892 185 PIQWSSLEFSK 195 (306)
Q Consensus 185 ~~~W~~L~~~~ 195 (306)
..+|++|.+.+
T Consensus 81 ~~~W~~L~~~~ 91 (131)
T 2o30_A 81 NEWWDSLLVGS 91 (131)
T ss_dssp CCCCSCSBC--
T ss_pred CCCCccccCCC
Confidence 68999998653
No 9
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.74 E-value=7.5e-18 Score=138.27 Aligned_cols=91 Identities=18% Similarity=0.196 Sum_probs=82.1
Q ss_pred CCeeeecCCCeEEEEEEec-CC-CCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCCE-EEEEEEe
Q 021892 106 YRHEFYQKPEEVVVTVFAK-GI-PAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 182 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k-~v-~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~K-IEI~L~K 182 (306)
.+|.|+||.+.|+|+|.++ ++ +.+++.|+|++++|+|.+...++..|.+.++||++|+|++|+|++.+++ |+|+|+|
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K 99 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSK 99 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECB
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEE
Confidence 4899999999999999986 66 7899999999999999987555667889999999999999999999887 9999999
Q ss_pred CCCCCCCceeeccC
Q 021892 183 AEPIQWSSLEFSKG 196 (306)
Q Consensus 183 ~~~~~W~~L~~~~~ 196 (306)
++..+|++|.+.+.
T Consensus 100 ~~~~~W~~L~~~~~ 113 (124)
T 1wgv_A 100 VGEYWWNAILEGEE 113 (124)
T ss_dssp SSSCCCSCSBTTSC
T ss_pred CCCCCCcCcccCCC
Confidence 98899999997654
No 10
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.73 E-value=4.6e-19 Score=112.92 Aligned_cols=33 Identities=33% Similarity=0.668 Sum_probs=29.9
Q ss_pred cchHHHHHHHHHHhCCCCHHHHHHHHHhhhhcC
Q 021892 243 DGDAALNKFFQEIYADADEDTRRAMKKSFVESN 275 (306)
Q Consensus 243 eg~a~l~~~fq~iY~~adddtkRAM~KSf~ES~ 275 (306)
+|+++||+|||+||++|||||||||||||+|||
T Consensus 3 dp~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 3 GSSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp --CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred ChhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 456789999999999999999999999999997
No 11
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.65 E-value=3.8e-16 Score=133.24 Aligned_cols=86 Identities=23% Similarity=0.367 Sum_probs=76.7
Q ss_pred CCCeeeecCCCeEEEEEEec-CCCCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCCE-EEEEEEe
Q 021892 105 KYRHEFYQKPEEVVVTVFAK-GIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAK 182 (306)
Q Consensus 105 k~r~dWyQt~~~V~ItI~~k-~v~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~K-IEI~L~K 182 (306)
..+|.|+||.+.|+|+|.++ ++..++|.|+|++++|+|.+. |.. .+.++||++|+|++|+|+|.+++ |+|+|.|
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K 88 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTK 88 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEEB
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEEEE
Confidence 45899999999999999985 788899999999999999875 334 58889999999999999999987 9999999
Q ss_pred CCC---CCCCceeec
Q 021892 183 AEP---IQWSSLEFS 194 (306)
Q Consensus 183 ~~~---~~W~~L~~~ 194 (306)
++. .+|++|.+.
T Consensus 89 ~~~~~~~~W~~L~k~ 103 (157)
T 2rh0_A 89 TKRDAANCWTSLLES 103 (157)
T ss_dssp SSCSTTCCCSEEETT
T ss_pred cCCCcCCcChhhhcC
Confidence 885 799999864
No 12
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.65 E-value=8.4e-16 Score=127.10 Aligned_cols=88 Identities=18% Similarity=0.242 Sum_probs=78.4
Q ss_pred CCeeeecCCCeEEEEEEec-C--CCCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCC-EEEEEEE
Q 021892 106 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 181 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k-~--v~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~-KIEI~L~ 181 (306)
.+|.|+||.+.|+|+|.++ + ++.+++.|+|++++|+|.+. |..+.+.++||++|+|++|+|++.++ .|+|+|+
T Consensus 8 ~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~ 84 (131)
T 1wfi_A 8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLE 84 (131)
T ss_dssp CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEEEEE
Confidence 3799999999999999987 5 78899999999999999874 34577899999999999999999997 6999999
Q ss_pred eCCC-CCCCceeeccC
Q 021892 182 KAEP-IQWSSLEFSKG 196 (306)
Q Consensus 182 K~~~-~~W~~L~~~~~ 196 (306)
|++. .+|++|.+.+.
T Consensus 85 K~~~~~~W~~L~~~~~ 100 (131)
T 1wfi_A 85 KINKMEWWNRLVTSDP 100 (131)
T ss_dssp BSSSCCCCSCSBSSCC
T ss_pred ECCCCCCChhhhcCCC
Confidence 9987 59999997643
No 13
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.61 E-value=2.1e-15 Score=123.23 Aligned_cols=89 Identities=18% Similarity=0.228 Sum_probs=78.6
Q ss_pred CCeeeecCCCeEEEEEEec-C--CCCCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCCceEEEeCC-EEEEEEE
Q 021892 106 YRHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLA 181 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k-~--v~~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~s~~kv~~~-KIEI~L~ 181 (306)
.+|.|+||.+.|+|+|.++ + ++.+++.|+|.+++|+|.++ |..|.+.++||++|+|++|+|++.++ +|+|+|.
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~ 93 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTVHLE 93 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEE
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEEEEE
Confidence 3799999999999999986 4 78899999999999998875 34678899999999999999999986 9999999
Q ss_pred eCCC-CCCCceeeccCc
Q 021892 182 KAEP-IQWSSLEFSKGA 197 (306)
Q Consensus 182 K~~~-~~W~~L~~~~~~ 197 (306)
|.+. .+|++|...+..
T Consensus 94 K~~~~~~W~~L~~~~~~ 110 (121)
T 3qor_A 94 KINKMEWWSRLVSSDPE 110 (121)
T ss_dssp BSSSSCCCSCSBTTSCC
T ss_pred ECCCCCCChhhhcCCCC
Confidence 9977 699999876543
No 14
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.08 E-value=3.7e-05 Score=59.58 Aligned_cols=79 Identities=18% Similarity=0.164 Sum_probs=67.5
Q ss_pred CCeeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCC-----C----------ceEEEcccccccccCCCceEE
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRYE 170 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~-----~----------~~y~~~l~L~~~I~pe~s~~k 170 (306)
++++++++++.+.|.+.++|+.++++.|.+.++.|.|+..... + ..|.-.+.|-..|+++..+.+
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~ 84 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAA 84 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEE
Confidence 3689999999999999999999999999999999999875321 1 136667889999999999999
Q ss_pred EeCCEEEEEEEeCC
Q 021892 171 VLSTKVEIRLAKAE 184 (306)
Q Consensus 171 v~~~KIEI~L~K~~ 184 (306)
...+-++|+|.|..
T Consensus 85 ~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 85 GRNGVLEIRIPKRP 98 (100)
T ss_dssp EETTEEEEEEEBC-
T ss_pred EeCCEEEEEEecCC
Confidence 99999999999975
No 15
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=97.94 E-value=0.0001 Score=57.53 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=68.8
Q ss_pred CCeeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCCC----------ceEEEcccccccccCCCceEEEeCCE
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGE----------EAYHFQPRLFGKIIPAKCRYEVLSTK 175 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~~----------~~y~~~l~L~~~I~pe~s~~kv~~~K 175 (306)
+.++|+++++.+.|.+.++|+.++++.|.+.++.|.|+...... ..|.-.+.|-..|+++..+.++...-
T Consensus 7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~Gv 86 (102)
T 4fei_A 7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGV 86 (102)
T ss_dssp CCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTE
T ss_pred CcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCE
Confidence 36899999999999999999999999999999999998653211 14666788999999999999999999
Q ss_pred EEEEEEeCCC
Q 021892 176 VEIRLAKAEP 185 (306)
Q Consensus 176 IEI~L~K~~~ 185 (306)
++|+|.|..+
T Consensus 87 L~I~lpK~~~ 96 (102)
T 4fei_A 87 LTVRFEKLRP 96 (102)
T ss_dssp EEEEEEBSSC
T ss_pred EEEEEEccCc
Confidence 9999999754
No 16
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.90 E-value=8.4e-06 Score=66.43 Aligned_cols=52 Identities=25% Similarity=0.218 Sum_probs=49.2
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc-hHHHHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEERIAEE 52 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~-~~~~wi~k~~~~l~~~ 52 (306)
++++|||+|.+|+.+++|+.|+.+|++|.+++|++. .+...+..|..++...
T Consensus 96 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 96 NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999998 8999999999999876
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=97.80 E-value=0.00015 Score=58.50 Aligned_cols=80 Identities=13% Similarity=0.035 Sum_probs=68.7
Q ss_pred CCeeeecCCCeEEEEEEecCCCCCccEEEeec-cEEEEEEEcCCC---c--------eEEEcccccccccCCCc-eEEEe
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGE-QILSVSIDVPGE---E--------AYHFQPRLFGKIIPAKC-RYEVL 172 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~-~~l~v~i~~~~~---~--------~y~~~l~L~~~I~pe~s-~~kv~ 172 (306)
+.++++++++.+.|.+.++|+.++++.|.+.+ +.|.|+...... . .|.-.+.|-..|+++.. +.+..
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~ 104 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYE 104 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEE
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEc
Confidence 36899999999999999999999999999999 999999864321 1 46667889999999998 88889
Q ss_pred CCEEEEEEEeCCC
Q 021892 173 STKVEIRLAKAEP 185 (306)
Q Consensus 173 ~~KIEI~L~K~~~ 185 (306)
.+-+.|+|.|...
T Consensus 105 ~GvL~I~lPK~~~ 117 (123)
T 3aab_A 105 NGVLTIRIPIAGT 117 (123)
T ss_dssp TTEEEEEEEGGGE
T ss_pred CCEEEEEEEcCCC
Confidence 9999999998653
No 18
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.76 E-value=4.5e-06 Score=70.89 Aligned_cols=49 Identities=16% Similarity=0.005 Sum_probs=46.3
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
||||+|++|..|++|++|+.+|++|.+++|.|..+...+..++.+++.+
T Consensus 104 ~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 104 AVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred HHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 3399999999999999999999999999999999999999999998876
No 19
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.76 E-value=3e-05 Score=63.82 Aligned_cols=83 Identities=16% Similarity=0.311 Sum_probs=70.7
Q ss_pred CCeeeecCCCeEEEEEEecCCC--CCccEEEeeccEEEEEEEcCCCceEEEcccccccc-cCCC--ceEEEeCCEEEEEE
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKI-IPAK--CRYEVLSTKVEIRL 180 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~--~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I-~pe~--s~~kv~~~KIEI~L 180 (306)
++|.=.|++++|+|.|.++.+. ..++.+.+.++.|.|++. .|.|.|.|-|+| +.+. ++|......+.|+|
T Consensus 4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtL 78 (134)
T 2k8q_A 4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKV 78 (134)
T ss_dssp SEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEECCSSCEECCSSCEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEecCCCeeecCCCcceeEeccCCEEEEEE
Confidence 3788899999999999999988 789999999998888753 799999999999 5554 46666778999999
Q ss_pred EeCCC-CCCCceee
Q 021892 181 AKAEP-IQWSSLEF 193 (306)
Q Consensus 181 ~K~~~-~~W~~L~~ 193 (306)
.|..+ .+++.|.-
T Consensus 79 pK~~~Ge~F~dLD~ 92 (134)
T 2k8q_A 79 AKLNKNEYFEDLDL 92 (134)
T ss_dssp EESSTTCCCSSTTC
T ss_pred eCCCCCCCCCCccc
Confidence 99886 68999863
No 20
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00044 Score=55.19 Aligned_cols=82 Identities=17% Similarity=0.331 Sum_probs=69.9
Q ss_pred CCeeeecCCCeEEEEEEecCCC--CCccEEEeeccEEEEEEEcCCCceEEEcccccccccCCC---ceEEEeCCEEEEEE
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAK---CRYEVLSTKVEIRL 180 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~--~e~v~V~f~~~~l~v~i~~~~~~~y~~~l~L~~~I~pe~---s~~kv~~~KIEI~L 180 (306)
++|.=.|+++.|+|.|.++.+. ..++.+.+.++.+.|.+. +|.|.|.|-++|.-++ ++|.+....+.|+|
T Consensus 18 P~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~l 92 (115)
T 3eud_A 18 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKV 92 (115)
T ss_dssp CCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEEECSSCEECSTTCEEEEETTTTEEEEEE
T ss_pred CcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEEecCcceecCCCcceEEeCCCcEEEEEE
Confidence 3788999999999999999876 678999999999988874 7999999999995433 47888889999999
Q ss_pred EeCCC-CCCCcee
Q 021892 181 AKAEP-IQWSSLE 192 (306)
Q Consensus 181 ~K~~~-~~W~~L~ 192 (306)
.|..+ +..+.|.
T Consensus 93 pK~~~GE~F~dLD 105 (115)
T 3eud_A 93 AKLNKNEYFEDLD 105 (115)
T ss_dssp EESSTTCCCCCTT
T ss_pred cCCcCCCcCCCcc
Confidence 99886 5677774
No 21
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.56 E-value=0.00044 Score=57.86 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=67.0
Q ss_pred CCeeeecCCCeEEEEEEecCCCCCccEEEee-ccEEEEEEEcCC-----C----------ceEEEcccccccccCCCceE
Q 021892 106 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRY 169 (306)
Q Consensus 106 ~r~dWyQt~~~V~ItI~~k~v~~e~v~V~f~-~~~l~v~i~~~~-----~----------~~y~~~l~L~~~I~pe~s~~ 169 (306)
++++|+++++.+.|.+.++|+.+++|.|.+. ++.|.|+..... + ..|.-.+.|-..|+++..+.
T Consensus 44 p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 123 (151)
T 1gme_A 44 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123 (151)
T ss_dssp GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEE
Confidence 4689999999999999999999999999994 679999874321 1 13566778999999999888
Q ss_pred EEeCCEEEEEEEeCCC
Q 021892 170 EVLSTKVEIRLAKAEP 185 (306)
Q Consensus 170 kv~~~KIEI~L~K~~~ 185 (306)
+....-++|+|.|...
T Consensus 124 ~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 124 GLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEETTEEEEEEECCCC
T ss_pred EEECCEEEEEEEccCc
Confidence 8999999999999653
No 22
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.54 E-value=0.00042 Score=54.01 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=65.8
Q ss_pred eeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcC---CC-----ceEEEcccccccccCCCceEEE-eCCEEEE
Q 021892 108 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 178 (306)
Q Consensus 108 ~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~---~~-----~~y~~~l~L~~~I~pe~s~~kv-~~~KIEI 178 (306)
.+++++++.+.|.+.++|+.++++.|.+.++.|.|+.... ++ ..|.-.+.|-..|+++..+-++ ...-+.|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 5899999999999999999999999999999999987532 11 2366678899999999999999 6889999
Q ss_pred EEEeCC
Q 021892 179 RLAKAE 184 (306)
Q Consensus 179 ~L~K~~ 184 (306)
+|.|..
T Consensus 84 ~lPK~~ 89 (101)
T 2wj5_A 84 QATPAS 89 (101)
T ss_dssp EECBCC
T ss_pred EEECCC
Confidence 999864
No 23
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.48 E-value=8.5e-05 Score=58.90 Aligned_cols=44 Identities=25% Similarity=0.475 Sum_probs=34.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+++|.+|+.+++|++|+.+|+++.+++|++..+...+..|
T Consensus 81 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 81 IKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 56788888888888888888888888888888877776666655
No 24
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.45 E-value=0.00079 Score=56.73 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=67.2
Q ss_pred eeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCC-----C-----------ceEEEcccccccccCCCceEEE
Q 021892 108 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E-----------EAYHFQPRLFGKIIPAKCRYEV 171 (306)
Q Consensus 108 ~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~-----~-----------~~y~~~l~L~~~I~pe~s~~kv 171 (306)
++++++++.+.|.+.++|+.+++|.|.+.++.|.|+..... + ..|.-.+.|-..|+++..+.+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 89999999999999999999999999999999999875322 1 1455667899999999988888
Q ss_pred eCCEEEEEEEeCCC
Q 021892 172 LSTKVEIRLAKAEP 185 (306)
Q Consensus 172 ~~~KIEI~L~K~~~ 185 (306)
..+-++|+|.|.+.
T Consensus 139 ~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 139 ENGVLSVILPKAES 152 (161)
T ss_dssp ETTEEEEEEEBCGG
T ss_pred ECCEEEEEEEcCCC
Confidence 99999999999653
No 25
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.30 E-value=0.0014 Score=51.54 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=66.1
Q ss_pred eeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcC---CC-----ceEEEcccccccccCCCceEEE-eCCEEEE
Q 021892 108 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 178 (306)
Q Consensus 108 ~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~---~~-----~~y~~~l~L~~~I~pe~s~~kv-~~~KIEI 178 (306)
-+++++++.+.|.+.++|+.++++.|.+.++.|.|+.... ++ ..|.-.+.|-..|+++..+-.+ ...-+.|
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I 84 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTF 84 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEE
Confidence 4789999999999999999999999999999999987421 11 2366678899999999999999 6889999
Q ss_pred EEEeCCC
Q 021892 179 RLAKAEP 185 (306)
Q Consensus 179 ~L~K~~~ 185 (306)
+|.|..+
T Consensus 85 ~~PK~~~ 91 (106)
T 3l1e_A 85 SGPKIPS 91 (106)
T ss_dssp EEEBCCC
T ss_pred EEEccCc
Confidence 9999754
No 26
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.00017 Score=55.67 Aligned_cols=48 Identities=25% Similarity=0.359 Sum_probs=32.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC------CCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA------PGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~------~~d~~~~~wi~k~~~~l 49 (306)
+.+|+++|.+|+.+++|+.|+.+|+++.+++ |.+..+..++.+|..+|
T Consensus 72 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 72 VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 4566777777777777777777777777777 66666666666665543
No 27
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.12 E-value=0.0038 Score=46.93 Aligned_cols=73 Identities=7% Similarity=0.096 Sum_probs=61.8
Q ss_pred ecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcCC-----C---ceEEEcccccccccCCCceEEEe-CCEEEEEEE
Q 021892 111 YQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E---EAYHFQPRLFGKIIPAKCRYEVL-STKVEIRLA 181 (306)
Q Consensus 111 yQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~-----~---~~y~~~l~L~~~I~pe~s~~kv~-~~KIEI~L~ 181 (306)
.++++.+.|.+-++|+.+++|.|.+.++.|.|+..... + ..|.-.+.|-..|+++..+-++. ..-+.|+|-
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 46788999999999999999999999999999875321 1 25777789999999999999998 889999998
Q ss_pred eC
Q 021892 182 KA 183 (306)
Q Consensus 182 K~ 183 (306)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 84
No 28
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.09 E-value=0.0007 Score=54.89 Aligned_cols=51 Identities=27% Similarity=0.366 Sum_probs=47.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch--HHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR--FTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~--~~~wi~k~~~~l~~~ 52 (306)
+.+|+++|.+|+.+++|+.|+.+|+++.+++|++.. +...+..+..++...
T Consensus 79 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 79 SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999888 888899999888886
No 29
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.97 E-value=0.00075 Score=56.46 Aligned_cols=52 Identities=31% Similarity=0.355 Sum_probs=48.6
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
++.+||++|.+|+.+++|+.|+.+|+++.+++|.+..+...+..|...+...
T Consensus 121 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 121 NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999988776
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=96.94 E-value=0.0022 Score=48.65 Aligned_cols=73 Identities=11% Similarity=0.154 Sum_probs=58.3
Q ss_pred cCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcC---CC-----ceEEEcccccccccCCCceEEE-eCCEEEEEEEe
Q 021892 112 QKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEIRLAK 182 (306)
Q Consensus 112 Qt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~---~~-----~~y~~~l~L~~~I~pe~s~~kv-~~~KIEI~L~K 182 (306)
++++.+.|++.++|+.+++|.|.+.++.|.|+.... ++ ..|.-.+.|-..|+++..+.++ ...-+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 467789999999999999999999999999987531 11 1366678899999999988899 78899999988
Q ss_pred CC
Q 021892 183 AE 184 (306)
Q Consensus 183 ~~ 184 (306)
..
T Consensus 83 ~~ 84 (90)
T 2y1y_A 83 KQ 84 (90)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 31
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.91 E-value=0.00081 Score=63.42 Aligned_cols=52 Identities=27% Similarity=0.459 Sum_probs=48.4
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+++||||+|.+|+.+++|++|+.+|++|.+++|.+..+...+..+...+...
T Consensus 306 ~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 306 NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999998888765
No 32
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.90 E-value=0.00086 Score=54.38 Aligned_cols=51 Identities=14% Similarity=0.146 Sum_probs=43.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+||.+|.+|+.+++|++|+.+|+++.+++|+++.+..+..++...|...
T Consensus 89 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 139 (148)
T 2vgx_A 89 PRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAI 139 (148)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHH
Confidence 567888899999999999999999999998888888888888888888775
No 33
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.83 E-value=0.001 Score=64.28 Aligned_cols=52 Identities=25% Similarity=0.405 Sum_probs=43.1
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+++||||+|.+|+++++|+.|+.+|++|.+++|++..+...+..|...+...
T Consensus 350 ~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 350 NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998888888887777653
No 34
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.79 E-value=0.00093 Score=53.11 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=35.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+||.+|.+|+.+++|+.|+.+|+++.+++|.++....+..++...|+..
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 86 PRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 346677777777777777777777777777777666666666666666553
No 35
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.65 E-value=0.0015 Score=51.43 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=38.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~ 50 (306)
|.+|+.+|.+||..|+|+.|+.+|++|.+++|.+..+-..+..|-..+.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~ 61 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLM 61 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhc
Confidence 5678888888888888888888888888888888776666665554443
No 36
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.61 E-value=0.00079 Score=62.33 Aligned_cols=51 Identities=22% Similarity=0.334 Sum_probs=28.2
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+++||||+|.+|+.+++|+.|+.+|++|.+++|++..+...+..|...+..
T Consensus 263 ~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~ 313 (338)
T 2if4_A 263 NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKA 313 (338)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999998888888887655544
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.61 E-value=0.0046 Score=53.00 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=62.7
Q ss_pred eeeecCCCeEEEEEEecCCCCCccEEEeeccEEEEEEEcC---CC-----ceEEEcccccccccCCCceEEE-eCCEEEE
Q 021892 108 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 178 (306)
Q Consensus 108 ~dWyQt~~~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~---~~-----~~y~~~l~L~~~I~pe~s~~kv-~~~KIEI 178 (306)
.+++++++.+.|.+.++|+.+++|.|.+.++.|.|+.... ++ ..|.-.+.|-..|+++..+-++ ..+-+.|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 5899999999999999999999999999999999987532 11 1356677899999999999999 5889999
Q ss_pred EEEeCCC
Q 021892 179 RLAKAEP 185 (306)
Q Consensus 179 ~L~K~~~ 185 (306)
+|.|...
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999653
No 38
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.52 E-value=0.0023 Score=59.03 Aligned_cols=52 Identities=21% Similarity=0.410 Sum_probs=45.4
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
++++||++|.+|+.+++|+.|+.+|++|.+++|++..+...+..|...+...
T Consensus 229 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 229 NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999988877777776665553
No 39
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.004 Score=45.96 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=26.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|++
T Consensus 38 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 38 PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 4567778888888888888888888888887776
No 40
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.51 E-value=0.0016 Score=51.22 Aligned_cols=44 Identities=23% Similarity=0.175 Sum_probs=36.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+++|+|+|.+|..+++|+.|+.+|+++.++.|+ +.+..-+..++
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~le 126 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKELE 126 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHhC
Confidence 579999999999999999999999999998875 44555555543
No 41
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.47 E-value=0.0027 Score=47.59 Aligned_cols=49 Identities=14% Similarity=0.047 Sum_probs=40.0
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
++.++|.+|.+|+.+++|+.|+.+|+++.+++|++...-..+..|-..+
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 54 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERL 54 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 3568999999999999999999999999999999877655555554433
No 42
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.43 E-value=0.0026 Score=49.98 Aligned_cols=47 Identities=23% Similarity=0.224 Sum_probs=38.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
|.|+..+|.+||..++|+.|+.+|++|.+++|++..+-.-+..|-..
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~ 54 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE 54 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH
Confidence 56888999999999999999999999999999987655545444333
No 43
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.39 E-value=0.0019 Score=49.78 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=31.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCC-----CchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPG-----DSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~-----d~~~~~wi~k~~~~l~~ 51 (306)
+.+++++|.+|+.+++|+.|+.+|+++.+++|+ +..+...+..+..++..
T Consensus 77 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 77 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666666666666666666665 55566666666555543
No 44
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.39 E-value=0.004 Score=46.66 Aligned_cols=50 Identities=22% Similarity=0.249 Sum_probs=45.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+|+++|.+|+.+++|+.|..+|+++.++.| +..+...+..|...+...
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999998 688889999998887764
No 45
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.34 E-value=0.0029 Score=51.57 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=39.0
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
++.+||++|.+|+.+|+|+.|+.+|++|.+++|++...-..+..|-
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 49 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTY 49 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999999876555554443
No 46
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.26 E-value=0.0036 Score=48.37 Aligned_cols=42 Identities=29% Similarity=0.488 Sum_probs=20.3
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 44 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k 44 (306)
.+++++|.+|+.+++|+.|..+|+++.+++|++..+..++.+
T Consensus 100 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 141 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRN 141 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 344455555555555555555555555555544444444333
No 47
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.21 E-value=0.0052 Score=51.55 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=46.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
..|+|-.|++||.+++|+.|+.+|+++.+++|.+..-..-+..++.++.+.
T Consensus 71 rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~kd 121 (152)
T 1pc2_A 71 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKD 121 (152)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999988888888888888775
No 48
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.18 E-value=0.017 Score=53.87 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=69.3
Q ss_pred CCeeeecCCC----eEEEEEEecCCCCCccEEEeeccEEEEEEEcCC----C---ceEEEcccccccccCCCceEEEe-C
Q 021892 106 YRHEFYQKPE----EVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG----E---EAYHFQPRLFGKIIPAKCRYEVL-S 173 (306)
Q Consensus 106 ~r~dWyQt~~----~V~ItI~~k~v~~e~v~V~f~~~~l~v~i~~~~----~---~~y~~~l~L~~~I~pe~s~~kv~-~ 173 (306)
+..|.|.+++ .+.|++-++|+.+++|.|.+.++.|+|+..... + ..|.-.+.|-..|+++..+-++. .
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n 178 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTD 178 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCC
Confidence 4678899999 899999999999999999999999999875321 1 25777889999999999999999 8
Q ss_pred CEEEEEEEeCCCC
Q 021892 174 TKVEIRLAKAEPI 186 (306)
Q Consensus 174 ~KIEI~L~K~~~~ 186 (306)
+-+.|+|.|..+.
T Consensus 179 GVL~I~lPK~~~~ 191 (314)
T 2bol_A 179 DVLVIEAPVNEPN 191 (314)
T ss_dssp SEEEEEEEBSSCC
T ss_pred CEEEEEEeccCcc
Confidence 8999999997653
No 49
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.16 E-value=0.0069 Score=43.03 Aligned_cols=41 Identities=20% Similarity=0.279 Sum_probs=27.3
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 43 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~ 43 (306)
.+++..|.+|+.+++|+.|+..|+++.+++|.+..+-..+.
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 50 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLG 50 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 46677777777777777777777777777776654433333
No 50
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.11 E-value=0.004 Score=52.55 Aligned_cols=51 Identities=10% Similarity=0.239 Sum_probs=43.7
Q ss_pred Chhhhhhhhhhhhccc-----------cHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 1 MSKAYWRKATACMKLE-----------EYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~-----------~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
++.|||.+|+||+.++ +|+.|+.+|++|.+++|++.....-+..+.+..+-
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el 140 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQL 140 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHH
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhc
Confidence 3579999999999985 99999999999999999998887777777665544
No 51
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.09 E-value=0.0051 Score=45.03 Aligned_cols=38 Identities=21% Similarity=0.331 Sum_probs=34.4
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHH
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 41 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~w 41 (306)
+|+.+|.+|+.+++|+.|+.+|+++.+++|++.....+
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 74 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR 74 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 89999999999999999999999999999998876644
No 52
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.0063 Score=44.83 Aligned_cols=48 Identities=8% Similarity=-0.030 Sum_probs=40.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+++.+|.+++.+++|+.|+..|+++.+++|.+..+-..+..|-..+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 51 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKL 51 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999877655555554433
No 53
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.04 E-value=0.007 Score=46.19 Aligned_cols=50 Identities=16% Similarity=0.259 Sum_probs=40.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|++..+-..+..|-..+..
T Consensus 27 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 76 (117)
T 3k9i_A 27 AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGR 76 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999987777776666554443
No 54
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.04 E-value=0.0082 Score=46.69 Aligned_cols=50 Identities=16% Similarity=0.105 Sum_probs=39.0
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~ 50 (306)
++.+|+.+|.+|+.+++|+.|+.+|+++.+++|++...-..+..|-..+.
T Consensus 50 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 50 REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 35688999999999999999999999999999988765555555544443
No 55
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.99 E-value=0.0072 Score=44.31 Aligned_cols=42 Identities=19% Similarity=0.096 Sum_probs=24.3
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 44 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k 44 (306)
.+++.+|.+|+.+++|+.|...|+++.+++|.+..+-..+..
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 455666666666666666666666666666655444333333
No 56
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.97 E-value=0.0062 Score=50.07 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=23.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+.+++|++|+.+|++|.+++|++...-..+..|
T Consensus 70 ~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~ 113 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQC 113 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHH
Confidence 34555555555555555555555555555555555444433333
No 57
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.96 E-value=0.0074 Score=45.02 Aligned_cols=46 Identities=26% Similarity=0.291 Sum_probs=28.4
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
.+++++|.+|+.+++|+.|...|+++.+++|.+..+...+..|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 81 KAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 4566666666666666666666666666666665555555554443
No 58
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.94 E-value=0.0081 Score=48.41 Aligned_cols=44 Identities=18% Similarity=0.074 Sum_probs=30.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|++...-..+..+
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 108 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAEL 108 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45677777777777777777777777777777766544444443
No 59
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.0075 Score=46.16 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=23.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 40 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~ 40 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|++...-.
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 76 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 345666666666666666666666666666666544333
No 60
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.88 E-value=0.0075 Score=45.50 Aligned_cols=35 Identities=29% Similarity=0.300 Sum_probs=20.3
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
.+++.+|.+|+.+++|+.|+..|+++.+++|.+..
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 85 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIK 85 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchH
Confidence 45555666666666666666666666665555443
No 61
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=95.87 E-value=0.0046 Score=47.23 Aligned_cols=45 Identities=16% Similarity=0.011 Sum_probs=39.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+++.+|.+|+.+++|++|+..|+++..+.|+++.+......+.
T Consensus 61 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 61 QALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 568999999999999999999999999999999988776655443
No 62
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.84 E-value=0.011 Score=44.97 Aligned_cols=51 Identities=20% Similarity=0.112 Sum_probs=42.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+|+..|.+||.+++|+.|+..++++.+++|++..+..=+...+..+...
T Consensus 46 ~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~~~~~~ 96 (104)
T 2v5f_A 46 VSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMAKE 96 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHHHHHhc
Confidence 357889999999999999999999999999999988755555555555543
No 63
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.75 E-value=0.0096 Score=47.05 Aligned_cols=45 Identities=22% Similarity=0.317 Sum_probs=31.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++..++|++..+-..+..|-
T Consensus 52 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 52 ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 456777777777778888888888777777777766555554443
No 64
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.74 E-value=0.012 Score=46.29 Aligned_cols=49 Identities=24% Similarity=0.412 Sum_probs=41.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~ 50 (306)
+.+++++|.+|+.+++|+.|...|+++.+++|.+..+...+..+...+.
T Consensus 81 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 129 (166)
T 1a17_A 81 IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK 129 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999998887766777755443
No 65
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.53 E-value=0.012 Score=47.37 Aligned_cols=45 Identities=20% Similarity=0.301 Sum_probs=33.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.+|+.+++|++|+.+|+++..++|++...-..+..|-
T Consensus 55 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 99 (148)
T 2vgx_A 55 SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECL 99 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 457778888888888888888888888888887776555554443
No 66
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.46 E-value=0.0099 Score=47.87 Aligned_cols=49 Identities=16% Similarity=0.053 Sum_probs=41.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~ 50 (306)
+.++|..|.+|+.+++|+.|..+|+++.+++|++...-..+..|-..+.
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999877666666655443
No 67
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.41 E-value=0.014 Score=46.96 Aligned_cols=45 Identities=16% Similarity=0.019 Sum_probs=36.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+...-..+..|-
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 89 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 568899999999999999999999999999998866544444443
No 68
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.26 E-value=0.023 Score=42.81 Aligned_cols=44 Identities=11% Similarity=0.090 Sum_probs=32.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++..++|.+...-..+..|
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~ 62 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKT 62 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 45778888888888888888888888888888776544444444
No 69
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.25 E-value=0.02 Score=43.38 Aligned_cols=44 Identities=9% Similarity=0.044 Sum_probs=28.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCC---chHHHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGD---SRFTNLIKECE 46 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d---~~~~~wi~k~~ 46 (306)
.++|++|.+|+.+++|+.|...|+++..+.|++ ...-.++..|-
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~ 86 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQ 86 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHH
Confidence 567777777777777777777777777777766 33344444443
No 70
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.22 E-value=0.023 Score=46.12 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=43.9
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
.++|=.|++||++++|..|+.+++...+.+|.+.....-...++.++.+
T Consensus 75 d~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 75 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 4788899999999999999999999999999998888888888777765
No 71
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.20 E-value=0.018 Score=43.55 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=21.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+.++|.+|.+++..++|+.|...|+++.+..|++.
T Consensus 2 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~ 36 (129)
T 2xev_A 2 ARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGV 36 (129)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc
Confidence 44566666666666666666666666666666655
No 72
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.20 E-value=0.013 Score=48.00 Aligned_cols=48 Identities=8% Similarity=-0.103 Sum_probs=39.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.++|.+|.+|+.+++|++|...|+++..++|.+..+-.-+..|-..+
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~ 83 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIK 83 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999887655555554333
No 73
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.17 E-value=0.023 Score=41.22 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=17.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
.+++.+|.+++.+++|+.|+..|+++.+++|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 40 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEES 40 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH
Confidence 4455555555555555555555555555555443
No 74
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.14 E-value=0.022 Score=40.29 Aligned_cols=45 Identities=18% Similarity=0.324 Sum_probs=38.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|.+......+..+.
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999877665555543
No 75
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.11 E-value=0.021 Score=43.70 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=24.3
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 43 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~ 43 (306)
.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+...-..+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 45666666666666666666666666666666544333333
No 76
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.08 E-value=0.029 Score=40.58 Aligned_cols=44 Identities=20% Similarity=0.167 Sum_probs=36.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCC--CchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~--d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|. +..+-..+..|
T Consensus 40 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~ 85 (112)
T 2kck_A 40 SKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADA 85 (112)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHH
Confidence 467899999999999999999999999999998 65544444444
No 77
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=94.92 E-value=0.017 Score=46.42 Aligned_cols=48 Identities=4% Similarity=-0.039 Sum_probs=39.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+...-..+..|-..+
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 110 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAA 110 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999876555555554443
No 78
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=94.82 E-value=0.04 Score=45.16 Aligned_cols=50 Identities=22% Similarity=0.323 Sum_probs=45.6
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
.++|=.+++||++|+|..|+.+.+.+.++.|.+.....-...++.++.+.
T Consensus 79 d~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 79 ECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKE 128 (134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHhh
Confidence 46788999999999999999999999999999999888888888888764
No 79
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=94.64 E-value=0.044 Score=44.25 Aligned_cols=46 Identities=17% Similarity=0.087 Sum_probs=36.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 47 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~ 47 (306)
..+++.+|.+|+.+++|+.|...|+++.+++|.+......+..+..
T Consensus 115 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 115 ITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 4678888999999999999999999999998888766655555543
No 80
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.59 E-value=0.052 Score=45.00 Aligned_cols=50 Identities=22% Similarity=0.323 Sum_probs=45.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
.++|=.+++||++++|..|+.+.+...+.+|.+.....-...++.++.+.
T Consensus 78 dcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~kd 127 (144)
T 1y8m_A 78 ECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKE 127 (144)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999999998888888888888775
No 81
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.45 E-value=0.036 Score=44.87 Aligned_cols=48 Identities=27% Similarity=0.240 Sum_probs=38.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
..+++.+|.+|+.+++|+.|+.+|+++.+++|.+..+-..+..|-..+
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~ 154 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGK 154 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHC
Confidence 457889999999999999999999999999998876655555554433
No 82
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.44 E-value=0.052 Score=39.84 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=24.2
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
.+++..|.+|+.+++|+.|+..|+++..+.|.+..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 78 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 78 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH
Confidence 45667777777777777777777777777666544
No 83
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.40 E-value=0.051 Score=39.56 Aligned_cols=47 Identities=9% Similarity=0.104 Sum_probs=39.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
+.+++..|.+++..++|+.|...|+++..+.|.+..+-..+..|-..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 50 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK 50 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999887665555555443
No 84
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.28 E-value=0.039 Score=46.42 Aligned_cols=48 Identities=15% Similarity=0.152 Sum_probs=36.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCC-CCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAP-GDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~-~d~~~~~wi~k~~~~l 49 (306)
+.++|.+|.+|+.+++|+.|+..|+++.+++| .+..+-.++..|-..+
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 55 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNI 55 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHh
Confidence 45788888888888888888888888888888 7776666655554433
No 85
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=94.24 E-value=0.051 Score=40.67 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=25.6
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 42 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi 42 (306)
.+|+.+|.+|+.+++|+.|...|+++..++|.+..+-..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 56 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNR 56 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 4666677777777777777777777776666654443333
No 86
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=94.21 E-value=0.042 Score=53.25 Aligned_cols=50 Identities=24% Similarity=0.415 Sum_probs=44.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+.+|+++|.+|+.+++|++|+.+|++|.+++|++......+..|...+..
T Consensus 74 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 123 (477)
T 1wao_1 74 IKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQ 123 (477)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999888888888655544
No 87
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.12 E-value=0.054 Score=39.29 Aligned_cols=45 Identities=16% Similarity=0.123 Sum_probs=37.9
Q ss_pred hhhhhhhhhccccHHHHHHHHHHhhccCCCCch-HHHHHHHHHHHH
Q 021892 5 YWRKATACMKLEEYETAKVALEKGASLAPGDSR-FTNLIKECEERI 49 (306)
Q Consensus 5 ~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~-~~~wi~k~~~~l 49 (306)
.|++|.+++.+++|+.|+..|+++.+++|.+.. +-..+..|-..+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~ 48 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKL 48 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc
Confidence 688999999999999999999999999999877 656665554444
No 88
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.07 E-value=0.06 Score=41.23 Aligned_cols=40 Identities=23% Similarity=0.256 Sum_probs=24.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLI 42 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi 42 (306)
.+++.+|.+|+.+++|+.|+.+|+++.+++|.+..+-..+
T Consensus 66 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 66 VLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4566666666666666666666666666666654433333
No 89
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=94.04 E-value=0.015 Score=43.41 Aligned_cols=50 Identities=12% Similarity=0.185 Sum_probs=37.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+|+.+|.+|+.+++|++|+.+|++|.++.+...... -...+...|...
T Consensus 41 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~-~~~~l~~~l~~~ 90 (100)
T 3ma5_A 41 VGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK-DLSELQDAKLKA 90 (100)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh-HHHHHHHHHHHc
Confidence 56899999999999999999999999999977543322 233334444443
No 90
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.94 E-value=0.069 Score=39.58 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=35.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+..|.+|+..++|+.|...|+++..++|.+..+-..+..|-
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 48 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVY 48 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 467889999999999999999999999999888765544444443
No 91
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=93.63 E-value=0.054 Score=45.67 Aligned_cols=42 Identities=12% Similarity=-0.081 Sum_probs=34.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 43 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~ 43 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|++...-.-+-
T Consensus 88 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg 129 (208)
T 3urz_A 88 VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLG 129 (208)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 568899999999999999999999999999998876444333
No 92
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.51 E-value=0.05 Score=43.89 Aligned_cols=44 Identities=9% Similarity=0.132 Sum_probs=33.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|..+|+++.+++|.+..+-..+..+
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 87 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATV 87 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 45788888888888888888888888888888776554444444
No 93
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=93.42 E-value=0.064 Score=40.24 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=38.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCC--CchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~--d~~~~~wi~k~~~~l~~~ 52 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.++.|. +......+...-..|...
T Consensus 53 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 53 SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhccc
Confidence 568999999999999999999999999999874 334444444444444443
No 94
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=93.36 E-value=0.097 Score=48.18 Aligned_cols=51 Identities=16% Similarity=0.193 Sum_probs=46.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+|+.+|.+|+.+++|+.|..+|+++.+++|++..+...+..+...+...
T Consensus 329 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 379 (450)
T 2y4t_A 329 VNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS 379 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc
Confidence 568999999999999999999999999999999999988888887777664
No 95
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=93.28 E-value=0.077 Score=44.55 Aligned_cols=37 Identities=22% Similarity=0.403 Sum_probs=26.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
+.+|+++|.+|+.+++|+.|+..|+++.+++|++..+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 3567777777777777777777777777777776654
No 96
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=93.26 E-value=0.092 Score=38.76 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
.+++.+|.+|+.+++|+.|+..|+++..+.|.+.
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 80 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYS 80 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCH
Confidence 3455555555555555555555555555555543
No 97
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=93.24 E-value=0.09 Score=43.46 Aligned_cols=47 Identities=13% Similarity=0.022 Sum_probs=39.2
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+...-..+..|-..+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 135 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYF 135 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 68999999999999999999999999999998876555555554333
No 98
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=93.24 E-value=0.088 Score=44.63 Aligned_cols=48 Identities=15% Similarity=0.185 Sum_probs=39.3
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
++.+++.+|.+++..++|++|+..|+++.+++|++...-..+..+-..
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 51 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLK 51 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999887766666655443
No 99
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=93.11 E-value=0.036 Score=46.66 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=33.1
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhcc-------CCCCchHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASL-------APGDSRFTNL 41 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~-------~~~d~~~~~w 41 (306)
.+|+-+|.++..|++|++|+.+|.+|.++ +|++ ..-|
T Consensus 58 ~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~--~~A~ 101 (159)
T 2hr2_A 58 FCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE--GKLW 101 (159)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH--HHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch--HHHH
Confidence 48999999999999999999999999999 9965 3455
No 100
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=93.09 E-value=0.078 Score=44.64 Aligned_cols=42 Identities=19% Similarity=0.094 Sum_probs=36.0
Q ss_pred hhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 8 KATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 8 ~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+|.+|+.+++|+.|+.+|+++.+++|++...-..+..+-..+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 101 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCR 101 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999987666666554443
No 101
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=93.06 E-value=0.095 Score=40.90 Aligned_cols=44 Identities=14% Similarity=0.002 Sum_probs=29.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++..++|.+..+-..+..|
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~ 90 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 35667777777777777777777777777777665444333333
No 102
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.06 E-value=0.044 Score=48.80 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=29.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
+.+|+++|.+|+.+++|++|+.+|+++.+++|++
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 5688888888888888888888888888888765
No 103
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=93.01 E-value=0.11 Score=44.13 Aligned_cols=49 Identities=14% Similarity=-0.024 Sum_probs=41.1
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
++.+|+.+|.+|+.+++|++|+..|+++.+++|++...-..+..+-..+
T Consensus 38 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 38 DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999877665555554444
No 104
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=92.90 E-value=0.093 Score=40.49 Aligned_cols=45 Identities=13% Similarity=0.107 Sum_probs=38.0
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
.+|.+|.+++..++|+.|+..|+++.+++|++...-..+..|-..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 63 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE 63 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999987765555555443
No 105
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=92.84 E-value=0.11 Score=50.06 Aligned_cols=51 Identities=18% Similarity=0.094 Sum_probs=43.3
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
++.+|+.+|.+|+.+++|++|+.+|++|.+++|++......+..+...+..
T Consensus 257 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~ 307 (474)
T 4abn_A 257 NPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSR 307 (474)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999998766666666555554
No 106
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.63 E-value=0.13 Score=42.39 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=26.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.++.|.+.
T Consensus 71 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 71 AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 45677777777777777777777777777777655
No 107
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.60 E-value=0.17 Score=38.02 Aligned_cols=36 Identities=8% Similarity=-0.201 Sum_probs=29.2
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+..|++-.|.++|..++|+.|..++++..+.+|.++
T Consensus 42 ~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 42 NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 356778888888888888888888888888888743
No 108
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.58 E-value=0.11 Score=42.70 Aligned_cols=43 Identities=9% Similarity=-0.053 Sum_probs=35.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 44 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k 44 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+...-.-+..
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 5689999999999999999999999999999987654333333
No 109
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.24 E-value=0.1 Score=45.40 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=21.0
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+++.+|.+|+.+++|+.|+..|+++.+++|.+..+-..+..+
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 279 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYI 279 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHH
Confidence 455555555555555555555555555555544443333333
No 110
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=92.00 E-value=0.16 Score=37.01 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=36.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++..|.+|+..++|+.|+..|+++..+.|.+..+-..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 52 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 52 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHH
Confidence 46899999999999999999999999999999876544444433
No 111
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=91.99 E-value=0.16 Score=43.60 Aligned_cols=46 Identities=7% Similarity=0.033 Sum_probs=34.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCC---chHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD---SRFTNLIKECEE 47 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d---~~~~~wi~k~~~ 47 (306)
+.++|.+|.+++..++|+.|...|+++.+..|.+ ...-.++..|-.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~ 63 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY 63 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 4678888888888888888888888888888877 444445544433
No 112
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=91.92 E-value=0.19 Score=36.96 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=30.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
+.+|+..|.+|+..++|+.|+..|+++.++.|.+...
T Consensus 1 a~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 37 (136)
T 2fo7_A 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA 37 (136)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CcHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhH
Confidence 3578888999999999999999999888888876543
No 113
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.92 E-value=0.14 Score=43.58 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=35.9
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
|..+++++|.+|+..++|+.|+..|+++.+++|.+..+-..+..|-
T Consensus 2 n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~ 47 (272)
T 3u4t_A 2 NDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCY 47 (272)
T ss_dssp ---CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4578899999999999999999999999999998876555444443
No 114
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=91.81 E-value=0.12 Score=49.51 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=37.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.||+++++|+.|+.+|++|.+++|++...-..+..|-
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~ 361 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQ 361 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 478999999999999999999999999999998765444444443
No 115
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=91.78 E-value=0.15 Score=43.30 Aligned_cols=44 Identities=14% Similarity=-0.111 Sum_probs=27.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|++.....|...+
T Consensus 111 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 111 NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 34566666666666666666666666666666665555444433
No 116
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=91.70 E-value=0.16 Score=47.52 Aligned_cols=48 Identities=6% Similarity=0.080 Sum_probs=39.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+.+|.+|+.+++|+.|+.+|++|.+++|.+...-..+..|-..+
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 320 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGL 320 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999998876555555554433
No 117
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=91.52 E-value=0.17 Score=42.16 Aligned_cols=43 Identities=21% Similarity=0.156 Sum_probs=26.0
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
.+|+.+|.+|+.+++|+.|+..|+++.+++|.+...-..+..+
T Consensus 174 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 216 (258)
T 3uq3_A 174 RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4566666666666666666666666666666655444444433
No 118
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=91.30 E-value=0.23 Score=42.03 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=24.1
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
.++|++|.+|+.+++|+.|...|+++.++.|++..
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~ 76 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN 76 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc
Confidence 46677777777777777777777777777776554
No 119
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.29 E-value=0.16 Score=46.46 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=38.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|++...-..+..|-
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 240 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAH 240 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 478999999999999999999999999999998866554444443
No 120
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=91.26 E-value=0.18 Score=44.79 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=18.5
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
.+|+.+|.+|+.+++|+.|+.+|+++.+++|++..
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 73 (281)
T 2c2l_A 39 VYYTNRALCYLKMQQPEQALADCRRALELDGQSVK 73 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH
Confidence 34555555555555555555555555555554443
No 121
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=90.74 E-value=0.23 Score=41.99 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=17.2
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+.
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~ 111 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN 111 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc
Confidence 3444555555555555555555555555555443
No 122
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.60 E-value=0.24 Score=42.06 Aligned_cols=44 Identities=11% Similarity=-0.035 Sum_probs=31.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++.+++|.+..+-.-+..+
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 117 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSY 117 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 34577888888888888888888888888887766544444444
No 123
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.58 E-value=0.21 Score=50.39 Aligned_cols=48 Identities=17% Similarity=0.221 Sum_probs=35.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+.+|.+|+.+++|++|+.+|++|.+++|++...-..+..|-..+
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~ 514 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELA 514 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc
Confidence 567888888888888888888888888888888766655555554333
No 124
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=90.56 E-value=0.15 Score=46.79 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=37.0
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
.+|+.+|.+|+.+++|+.|+.+|+++.+++|++...-..+..+-
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~ 274 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAK 274 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 38999999999999999999999999999998765544444443
No 125
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=90.21 E-value=0.3 Score=38.21 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=26.0
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 44 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k 44 (306)
.+++..|.+|+.+++|+.|...|+++.++.|.+..+-..+..
T Consensus 111 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 152 (186)
T 3as5_A 111 NVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAF 152 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 456666667777777777777777776666665444433333
No 126
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=90.18 E-value=0.27 Score=42.19 Aligned_cols=51 Identities=18% Similarity=0.200 Sum_probs=40.0
Q ss_pred hhhhhhhhhhhhcc----------ccHHHHHHHHHHhhccCCCCchHHHHH---HHHHHHHHhh
Q 021892 2 SKAYWRKATACMKL----------EEYETAKVALEKGASLAPGDSRFTNLI---KECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l----------~~y~~A~~~l~~a~~~~~~d~~~~~wi---~k~~~~l~~~ 52 (306)
..++|++|.+|+.+ ++|+.|+..|+++.+..|+++...... ..|...+...
T Consensus 185 ~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~ 248 (261)
T 3qky_A 185 DDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTEL 248 (261)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHh
Confidence 35899999999988 999999999999999999987554444 4444444443
No 127
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=90.13 E-value=0.16 Score=47.92 Aligned_cols=34 Identities=6% Similarity=0.010 Sum_probs=18.7
Q ss_pred hhhhhhhhhhhcccc-HHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEE-YETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~-y~~A~~~l~~a~~~~~~d~ 36 (306)
.+|+.+|.+|+.+++ |++|+.+|++|.+++|++.
T Consensus 132 ~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~ 166 (382)
T 2h6f_A 132 TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 166 (382)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCH
Confidence 455555555555554 5555555555555555543
No 128
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=90.08 E-value=0.98 Score=41.92 Aligned_cols=71 Identities=10% Similarity=-0.027 Sum_probs=56.9
Q ss_pred CCCeEEEEEEe-cCCCCCccEEEeeccEEEEEEEcCCC-----------ceEEEcccccccccCCCceEEEeCCEEEEEE
Q 021892 113 KPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGE-----------EAYHFQPRLFGKIIPAKCRYEVLSTKVEIRL 180 (306)
Q Consensus 113 t~~~V~ItI~~-k~v~~e~v~V~f~~~~l~v~i~~~~~-----------~~y~~~l~L~~~I~pe~s~~kv~~~KIEI~L 180 (306)
++..+.|.+.+ +|+.+++|.|.+..+.|+|+...... ..|.=.+.|-..|+++..+-+...+-+.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 44568888888 99999999999999999998753211 1255567888999999998888899999998
Q ss_pred EeC
Q 021892 181 AKA 183 (306)
Q Consensus 181 ~K~ 183 (306)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 773
No 129
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=89.75 E-value=0.32 Score=45.83 Aligned_cols=34 Identities=15% Similarity=0.006 Sum_probs=17.0
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
.+|+.+|.+|+.+++|+.|+..|+++.+++|++.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~ 131 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANY 131 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCH
Confidence 3444455555555555555555555555555443
No 130
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=89.72 E-value=0.3 Score=40.67 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=38.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 47 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~ 47 (306)
+.+++.+|.+|+.+++|+.|...|+++.+++|.+..+-..+..+-.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 184 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA 184 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998765555555433
No 131
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=89.54 E-value=0.49 Score=38.19 Aligned_cols=35 Identities=14% Similarity=-0.062 Sum_probs=32.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+.+++.+|.+|+.+|+|++|...|+++.+++|...
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 56899999999999999999999999999998743
No 132
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.34 E-value=0.31 Score=42.63 Aligned_cols=37 Identities=5% Similarity=-0.026 Sum_probs=22.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
+.++++.|.+++..++|+.|+..|+++.+++|.+..+
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~ 39 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIA 39 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHH
Confidence 3456666666666666666666666666666655443
No 133
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=89.08 E-value=0.41 Score=42.82 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=36.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+.+|.+|+.+++|+.|+..|+++.+++|++...-..+..+-..+
T Consensus 247 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 247 YSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 457888888888888899999888888888888766555555544433
No 134
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=89.01 E-value=0.42 Score=46.15 Aligned_cols=44 Identities=14% Similarity=0.002 Sum_probs=36.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+.+++|++|+.+|++|.+++|++...-..+..+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 56899999999999999999999999999999886644444333
No 135
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=89.00 E-value=0.43 Score=41.28 Aligned_cols=44 Identities=14% Similarity=0.200 Sum_probs=40.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|..+|+++.+++|++.....++..|
T Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 313 (330)
T 3hym_B 270 ASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHC 313 (330)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHH
Confidence 56899999999999999999999999999999998877777766
No 136
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=88.96 E-value=0.35 Score=43.16 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=34.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 39 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~ 39 (306)
+.+|+.+|++|+.+|+|++|...|+++.+++|+++..-
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 45788999999999999999999999999999987653
No 137
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=88.70 E-value=0.55 Score=36.61 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=20.0
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
.+++..|.+|+.+++|+.|...|+++.++.|.+..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 77 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVK 77 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH
Confidence 34555566666666666666666666655555443
No 138
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=88.62 E-value=0.5 Score=34.52 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=15.2
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
+++..|.+|+.+++|+.|+..|+++..+.|.+
T Consensus 37 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 68 (136)
T 2fo7_A 37 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 68 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc
Confidence 34444444444444444444444444444443
No 139
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=88.50 E-value=0.34 Score=49.80 Aligned_cols=48 Identities=13% Similarity=0.054 Sum_probs=33.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.||+.+|.+|+.+++|++|+.+|++|.+++|++...-.-+..+-..+
T Consensus 111 ~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~ 158 (723)
T 4gyw_A 111 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIV 158 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhc
Confidence 567777777888888888888888888877777765544444444333
No 140
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=88.46 E-value=0.34 Score=49.77 Aligned_cols=45 Identities=9% Similarity=0.158 Sum_probs=38.3
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
++.||+.+|.+|+.+++|++|+.+|++|.+++|++...-..+..+
T Consensus 76 ~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~ 120 (723)
T 4gyw_A 76 FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 120 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 367999999999999999999999999999999987654444443
No 141
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=88.37 E-value=0.41 Score=38.87 Aligned_cols=44 Identities=18% Similarity=0.150 Sum_probs=32.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|.+..+-..+..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 51 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEI 51 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 45788888888888888888888888888888775544433333
No 142
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=88.25 E-value=0.42 Score=42.38 Aligned_cols=36 Identities=22% Similarity=0.144 Sum_probs=20.1
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
.+|+.+|.+|+.+++|+.|+..|+++.+++|.+...
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 134 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLELKPDNQTA 134 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHH
Confidence 345555555555555555555555555555554443
No 143
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=88.11 E-value=0.45 Score=44.62 Aligned_cols=47 Identities=13% Similarity=0.084 Sum_probs=35.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
+.+|+.+|.+|+.+++|+.|+..|+++.+++|++...-..+..|-..
T Consensus 59 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 105 (537)
T 3fp2_A 59 PVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANES 105 (537)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 46788889999999999999999999998888876655444444433
No 144
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=88.10 E-value=0.18 Score=42.35 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=32.7
Q ss_pred ChhhhhhhhhhhhccccH----------HHHHHHHHHhhccCCCCch
Q 021892 1 MSKAYWRKATACMKLEEY----------ETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y----------~~A~~~l~~a~~~~~~d~~ 37 (306)
++.+|++.|.++..+++| ++|+.+|++|.+++|+...
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~ 81 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE 81 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHH
Confidence 367899999999999875 5999999999999999763
No 145
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=87.97 E-value=0.47 Score=40.05 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=32.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+.++|.+|.+++..++|+.|...|+++.+..|.++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~ 38 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGP 38 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 56899999999999999999999999999999765
No 146
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=87.94 E-value=0.28 Score=39.72 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=31.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 39 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~ 39 (306)
+.+++.+|.+|+.+++|++|+..|+++..++| ++.+.
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~ 76 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYK 76 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHH
Confidence 56889999999999999999999999999988 66543
No 147
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=87.85 E-value=0.49 Score=38.40 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=36.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|.+..+-..+..+
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 85 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWF 85 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 45789999999999999999999999999999876554444433
No 148
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=87.83 E-value=0.48 Score=39.17 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=29.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++..++|.+..+-..+..+
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 100 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNV 100 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 35667777777777777777777777777777665444333333
No 149
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=87.81 E-value=0.46 Score=45.56 Aligned_cols=46 Identities=9% Similarity=0.011 Sum_probs=32.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~ 50 (306)
+.+|+.+|.+|+.+++|++|+.+|++|.+++|+ . ..|.......+.
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~--~~~~~lg~~~~~ 182 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-K--VSLQNLSMVLRQ 182 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-H--HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-H--HHHHHHHHHHHH
Confidence 467888888888888888888888888888877 2 344444433443
No 150
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=87.57 E-value=0.44 Score=42.56 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=26.6
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 43 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~ 43 (306)
.++|.+|.+|+.+++|+.|+..|+++.+++|.+..+-..+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 106 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLG 106 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHH
Confidence 35677777777777777777777777777776654433333
No 151
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=87.12 E-value=0.62 Score=40.60 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=33.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++.+++|.+...-..+..+
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 37 YIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 45788888888888888888888888888888776544444333
No 152
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=86.98 E-value=0.47 Score=39.22 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=18.5
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
+++.+|.+|+.+++|+.|+..|+++.++.|.+..
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 194 (243)
T 2q7f_A 161 ARFQFGMCLANEGMLDEALSQFAAVTEQDPGHAD 194 (243)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH
Confidence 4455555555555555555555555555554443
No 153
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=86.92 E-value=0.68 Score=41.01 Aligned_cols=44 Identities=16% Similarity=0.090 Sum_probs=30.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+.+++|+.|+..|+++.+++|.+..+-..+..+
T Consensus 251 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 251 YLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 35677778888888888888888888887777765544444444
No 154
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=86.70 E-value=0.52 Score=43.71 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=19.6
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
.+|+.+|.+|+.+++|+.|+.+|+++.+++|++.
T Consensus 40 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 73 (514)
T 2gw1_A 40 VFYSNLSACYVSVGDLKKVVEMSTKALELKPDYS 73 (514)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHH
Confidence 3455555566666666666666665555555544
No 155
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.60 E-value=0.61 Score=39.05 Aligned_cols=37 Identities=16% Similarity=-0.001 Sum_probs=24.7
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 39 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~ 39 (306)
.+++..|.+|+.+++|+.|+..|+++.+++|.+..+-
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 108 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVL 108 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHH
Confidence 4566677777777777777777777777766654433
No 156
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=86.50 E-value=0.6 Score=40.31 Aligned_cols=37 Identities=22% Similarity=0.193 Sum_probs=23.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
+.+++.+|.+|+.+++|+.|...|+++.+++|.+...
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 91 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAV 91 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHH
Confidence 3456666666666677777777776666666665443
No 157
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=86.47 E-value=0.33 Score=42.99 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=27.2
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+|+++|++|+.+++|+.|+.+|+++.+++|+..
T Consensus 201 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 201 YFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 689999999999999999999999999999744
No 158
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=86.19 E-value=0.71 Score=41.67 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=32.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 39 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~ 39 (306)
+.+|+.+|.+|+.+++|+.|+..|+++..++|++...-
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 104 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 104 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHH
Confidence 56789999999999999999999999999998876543
No 159
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=86.13 E-value=0.59 Score=45.34 Aligned_cols=48 Identities=17% Similarity=0.152 Sum_probs=37.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+.+|.+|+.+++|++|+.+|+++.+++|++...-..+..+...+
T Consensus 91 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 91 PGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 457888888888888888888888888888888776666666665555
No 160
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=85.97 E-value=0.61 Score=45.25 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=36.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.+|+.+++|++|+.+|+++.+++|++...-..+..|-
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 101 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHAL 101 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 568899999999999999999999999999998876555554443
No 161
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.80 E-value=0.9 Score=37.95 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=15.9
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+++.+|.+|+.+++|+.|+..|+++.++.|.+.
T Consensus 143 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~ 175 (252)
T 2ho1_A 143 VFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQP 175 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccH
Confidence 344444444555555555555555444444443
No 162
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.64 E-value=0.75 Score=42.64 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=35.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+..++|+.|+..|+++..++| +..+-..+..|
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~ 48 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSAC 48 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHH
Confidence 67899999999999999999999999999998 44433333333
No 163
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=84.72 E-value=0.43 Score=44.81 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=40.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~ 50 (306)
+.+|+.+|.+|+..++|+.|+..|+++..++|++..+-.-+..|-..+.
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 73 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTG 73 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999998776665555544443
No 164
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=84.71 E-value=0.81 Score=41.84 Aligned_cols=37 Identities=24% Similarity=0.220 Sum_probs=25.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
+.+|+.+|.+|+.+++|+.|+..|+++.+++|.+...
T Consensus 60 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 96 (450)
T 2y4t_A 60 YIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAA 96 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH
Confidence 3466777777777777777777777777777765443
No 165
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=84.71 E-value=0.87 Score=39.23 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=30.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+++.+|.+|+.+++|+.|+..|+++.++.|.+...-..+..+
T Consensus 206 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 206 AQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 34677777778888888888888888877777765544444333
No 166
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=84.45 E-value=1.1 Score=39.68 Aligned_cols=35 Identities=11% Similarity=-0.127 Sum_probs=32.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
+.++|.+|.+|+.+++|++|+..|+++..++|++.
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~ 253 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXDLTAA 253 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGG
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccc
Confidence 56899999999999999999999999999999873
No 167
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=83.73 E-value=0.75 Score=46.33 Aligned_cols=45 Identities=16% Similarity=0.005 Sum_probs=38.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+|+.+|.+|+.+++|++|+..|+++.+++|++...-..+..+-
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 477 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAE 477 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHH
Confidence 568999999999999999999999999999999876554444443
No 168
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=82.88 E-value=0.87 Score=40.59 Aligned_cols=36 Identities=8% Similarity=0.027 Sum_probs=32.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
+.+++++|.+++.+++|+.|...|+++.++.|.+..
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 44 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLK 44 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHH
Confidence 457899999999999999999999999999998864
No 169
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=81.93 E-value=1.3 Score=33.18 Aligned_cols=31 Identities=6% Similarity=0.146 Sum_probs=28.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
+.-+|..|.++|..++|..|..-|+.|.++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 4568999999999999999999999999864
No 170
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=81.88 E-value=1.3 Score=38.90 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=32.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
+.+|++.|.+|+.+++|+.|+.+|+++.++.|....
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 357889999999999999999999999999987654
No 171
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=81.35 E-value=0.97 Score=41.21 Aligned_cols=31 Identities=23% Similarity=0.106 Sum_probs=15.6
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCC
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPG 34 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~ 34 (306)
++|++|+++.++++.++|...|+++...+|.
T Consensus 210 a~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 210 IAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 4445555555555555555555555555443
No 172
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=81.22 E-value=1.4 Score=37.64 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=24.6
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhc
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGAS 30 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~ 30 (306)
++.++|..|.+|+..++|+.|...|+++.+
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 356788888888888888888888888887
No 173
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.92 E-value=1.8 Score=32.23 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=38.2
Q ss_pred Chhhhhhhhhhhhcccc---HHHHHHHHHHhhccCCCCchHHHHHHHHHH
Q 021892 1 MSKAYWRKATACMKLEE---YETAKVALEKGASLAPGDSRFTNLIKECEE 47 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~---y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~ 47 (306)
++.+++.+|.++|..++ ...|...|++|.+++|++..-...+-....
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~ 54 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHF 54 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHH
Confidence 46789999999986666 899999999999999999876666555433
No 174
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=80.68 E-value=0.99 Score=41.03 Aligned_cols=33 Identities=6% Similarity=0.114 Sum_probs=23.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPG 34 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~ 34 (306)
+.+|++.|.+|+.+++|+.|+.+|++|.++.+.
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHh
Confidence 456777777777777777777777777776544
No 175
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=80.66 E-value=1.6 Score=40.34 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=38.2
Q ss_pred hhhhhhhhhhhhcc--ccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKL--EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l--~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+.+|..+|.++..+ ++|+.|+.+|++|.+++|+++.+..-+..+-..+..
T Consensus 136 ~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~ 187 (472)
T 4g1t_A 136 PELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDN 187 (472)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Confidence 35677788877654 689999999999999999998776666666555544
No 176
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=80.16 E-value=0.83 Score=34.48 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=19.9
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAP 33 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~ 33 (306)
.+++.+|.+|+.+++|+.|+.+|+++.++.+
T Consensus 10 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 40 (164)
T 3ro3_A 10 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 40 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 4566666666666666666666666666543
No 177
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=79.90 E-value=2.1 Score=38.47 Aligned_cols=35 Identities=11% Similarity=-0.045 Sum_probs=19.9
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
.+|+.+|.+|+.+++|+.|+..|+++.+++|.+..
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 272 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD 272 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Confidence 34555555566666666666666666665555443
No 178
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=79.47 E-value=2.5 Score=37.31 Aligned_cols=47 Identities=13% Similarity=0.033 Sum_probs=38.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+.+|.++..+++++.|...|+++.++.|.+..+ .|+......+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~ 145 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTL-VYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccH-HHHHHHHHHH
Confidence 4578899999999999999999999999999987643 5666665443
No 179
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=79.46 E-value=1.1 Score=37.48 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=28.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
+.+|+..|.+|+.+++|+.|+..|+++..+
T Consensus 127 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 127 AKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999988
No 180
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=79.13 E-value=1.2 Score=40.42 Aligned_cols=34 Identities=0% Similarity=0.018 Sum_probs=23.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
+.+|+.+|.+|+.+++|+.|+.+|++|.++.+..
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 4567777777777777777777777777765443
No 181
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=79.09 E-value=1.4 Score=37.59 Aligned_cols=35 Identities=9% Similarity=0.027 Sum_probs=31.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
..++++|.+++..++|+.|...|+++.++.|.+..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 40 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLK 40 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHH
Confidence 46889999999999999999999999999998754
No 182
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.91 E-value=0.96 Score=34.11 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=27.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
+.+++..|.+|+.+++|+.|...|+++.++.
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4578899999999999999999999998764
No 183
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=77.69 E-value=2.3 Score=38.25 Aligned_cols=36 Identities=6% Similarity=-0.011 Sum_probs=32.3
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCch
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~ 37 (306)
+.+++++|.+++..++|+.|+..|+++.++.|.+..
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 83 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLR 83 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChh
Confidence 356889999999999999999999999999998764
No 184
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=77.31 E-value=1.3 Score=37.14 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=29.2
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
++.|+|+.|..|+..++|+.|...|++|.+.+
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g 48 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG 48 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999998875
No 185
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=76.66 E-value=2.1 Score=39.51 Aligned_cols=45 Identities=18% Similarity=0.189 Sum_probs=38.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 46 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~ 46 (306)
+.+++.+|.+|+.+++|+.|+..|+++.++.|++..+-..+..|-
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y 291 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCY 291 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHH
Confidence 467889999999999999999999999999999887766665553
No 186
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=76.51 E-value=2.1 Score=37.70 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=34.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
.+++..|.+++..++|+.|...|+++.+++|++.....-+..+
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~ 160 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAET 160 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHH
Confidence 4678889999999999999999999999999887655444444
No 187
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=74.58 E-value=2.5 Score=35.66 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=39.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc---C----------------------CCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL---A----------------------PGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~---~----------------------~~d~~~~~wi~k~~~~l~~~ 52 (306)
+.+++-.|.++|+.++|-.|...|++|..+ - +.|..+.-+|.+|-.+|.+.
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~ 138 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQD 138 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCH
Confidence 347788999999999999999999997332 1 12335888899998887764
No 188
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=74.00 E-value=2.4 Score=40.28 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=36.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
+.+|+.+|.+|+.+++|++|...|+++.+++|.+..+-..+..+
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 559 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALV 559 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 45788999999999999999999999999999887655555444
No 189
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=73.91 E-value=3 Score=40.51 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=36.0
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHhh
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~~ 52 (306)
..|.|+|.+|++||+|++|..++++| ..+..|...|...+...
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA-------~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKA-------NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHH-------TCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHc-------CCchhHHHHHHHHHHcC
Confidence 45779999999999999999999999 24788888887777653
No 190
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=73.38 E-value=1.9 Score=38.24 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=27.6
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
.+++..|.+++.+++|+.|+.+|+++. ++|..
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 478888999999999999999999999 88864
No 191
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.35 E-value=1.5 Score=38.36 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=27.9
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
.+|+-.|.+|+.+++|+.|+.+|++|.++.
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 588999999999999999999999998875
No 192
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.14 E-value=2.1 Score=37.47 Aligned_cols=35 Identities=6% Similarity=-0.208 Sum_probs=29.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhh---ccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGA---SLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~---~~~~~d~ 36 (306)
+.+|+..|.+|+.+++|+.|+.+|++|. +..+.+.
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~ 192 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNE 192 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccc
Confidence 4588999999999999999999999998 4455544
No 193
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=72.11 E-value=1.7 Score=38.05 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=28.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAP 33 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~ 33 (306)
+.+|+-.|.+|+.+++|+.|+.+|++|.++.+
T Consensus 196 ~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 196 VKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999998764
No 194
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=71.63 E-value=2.4 Score=33.21 Aligned_cols=33 Identities=9% Similarity=-0.019 Sum_probs=29.0
Q ss_pred Chhhhhhhhhhhhc----cccHHHHHHHHHHhhccCC
Q 021892 1 MSKAYWRKATACMK----LEEYETAKVALEKGASLAP 33 (306)
Q Consensus 1 ~aka~~R~Gia~~~----l~~y~~A~~~l~~a~~~~~ 33 (306)
++.|+|+.|.+|+. .++++.|...|++|.+.+.
T Consensus 56 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 92 (138)
T 1klx_A 56 SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLND 92 (138)
T ss_dssp CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCC
Confidence 35789999999998 9999999999999998753
No 195
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=71.48 E-value=3.7 Score=36.34 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=31.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
..+++.+|.+|..++++++|...|+++.+++|++.
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~ 164 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT 164 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH
Confidence 46788999999999999999999999999998864
No 196
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=71.16 E-value=3.8 Score=34.00 Aligned_cols=31 Identities=13% Similarity=0.089 Sum_probs=28.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
+.+++.+|.+|+.+++|+.|+..|+++..+.
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (283)
T 3edt_B 43 ATMLNILALVYRDQNKYKEAAHLLNDALAIR 73 (283)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999873
No 197
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=70.54 E-value=2.3 Score=38.49 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=21.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGAS 30 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~ 30 (306)
.+++..|.+|+.+++|+.|+.+|++|.+
T Consensus 223 ~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 223 ISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4677778888888888888888888777
No 198
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=70.48 E-value=2.8 Score=37.87 Aligned_cols=29 Identities=10% Similarity=0.196 Sum_probs=23.7
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
.+|+..|.+|+.+++|+.|+.+|++|.++
T Consensus 225 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 225 RTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 47788888888888888888888888874
No 199
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=70.14 E-value=2.6 Score=35.83 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=27.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
+.+++.+|.+|+.+++|+.|+..|+++..+
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999987
No 200
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=68.84 E-value=2.3 Score=33.93 Aligned_cols=30 Identities=10% Similarity=0.123 Sum_probs=27.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
+.+++..|.+|+.+++|+.|+.+|++|..+
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999988
No 201
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=67.60 E-value=2.4 Score=37.54 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=30.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
+.+|+..|.+|+.+++|+.|+.+|+++..+.+..
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 4678899999999999999999999999986643
No 202
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=67.20 E-value=2.5 Score=36.94 Aligned_cols=28 Identities=7% Similarity=-0.225 Sum_probs=26.1
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGAS 30 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~ 30 (306)
.+|...|.+|+.+++|+.|+.+|++|.+
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999985
No 203
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=66.51 E-value=3.5 Score=35.11 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=24.7
Q ss_pred hhhhhhhhhhhhc----cccHHHHHHHHHHhhccCC
Q 021892 2 SKAYWRKATACMK----LEEYETAKVALEKGASLAP 33 (306)
Q Consensus 2 aka~~R~Gia~~~----l~~y~~A~~~l~~a~~~~~ 33 (306)
+.+++..|.+|+. +++|+.|+..|+++.++++
T Consensus 182 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 182 SPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC
Confidence 3567778888888 8888888888888887765
No 204
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=66.43 E-value=3.9 Score=34.13 Aligned_cols=33 Identities=12% Similarity=0.006 Sum_probs=23.6
Q ss_pred hhhhhhhhhhhhc----cccHHHHHHHHHHhhccCCC
Q 021892 2 SKAYWRKATACMK----LEEYETAKVALEKGASLAPG 34 (306)
Q Consensus 2 aka~~R~Gia~~~----l~~y~~A~~~l~~a~~~~~~ 34 (306)
+.|++..|.+|+. .++|+.|...|++|.++++.
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 121 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSES 121 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTS
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCC
Confidence 4567777777776 77777777777777777663
No 205
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=66.33 E-value=7.1 Score=38.03 Aligned_cols=49 Identities=12% Similarity=0.081 Sum_probs=38.1
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhc-----cCCCCchHHH---HHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTN---LIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~-----~~~~d~~~~~---wi~k~~~~l~ 50 (306)
+.+|+..|.+|+++|+|++|...|++|.+ |+|+++.+.. .+..|..++.
T Consensus 393 a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 449 (490)
T 3n71_A 393 GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELR 449 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999987 5888876554 4444544333
No 206
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=65.41 E-value=2.8 Score=33.45 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=27.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
+.+++..|.+|+.+++|+.|..+|+++..+.
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999998764
No 207
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=64.99 E-value=11 Score=27.76 Aligned_cols=50 Identities=16% Similarity=0.030 Sum_probs=33.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc-------CCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL-------APGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~-------~~~d~~~~~wi~k~~~~l~~ 51 (306)
|..+.++++-+=..|+|++|+..|..|.++ .|+...-..-..+|...+..
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~R 75 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRR 75 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 345778888888899988888877776654 55555444455555555544
No 208
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=62.17 E-value=8.5 Score=36.41 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=20.6
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCCc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 36 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~ 36 (306)
.+++.+|.+|+.+++|++|+..|+++.+++|.+.
T Consensus 374 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 407 (597)
T 2xpi_A 374 VTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFG 407 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 3555666666666666666666666666665543
No 209
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=61.65 E-value=14 Score=27.06 Aligned_cols=51 Identities=18% Similarity=0.043 Sum_probs=33.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc-------CCCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL-------APGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~-------~~~d~~~~~wi~k~~~~l~~~ 52 (306)
|..+.++++-+=..++|++|+..|..|.++ .|++..-..-..+|...+...
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RA 68 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRI 68 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 345778888888888888888777666553 665555445555666555553
No 210
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=61.42 E-value=4.8 Score=34.14 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=27.0
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCC
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPG 34 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~ 34 (306)
+.+++.+|.+|+.+++|+.|+..|+++.++.+.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 457888889999999999999999888887553
No 211
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=60.52 E-value=8.1 Score=32.64 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=27.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
+.+++.+|.+|+.+++|+.|+..|+++..+
T Consensus 69 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 98 (311)
T 3nf1_A 69 ATMLNILALVYRDQNKYKDAANLLNDALAI 98 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999987
No 212
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=59.99 E-value=12 Score=28.12 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=31.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc-------CCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL-------APGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~-------~~~d~~~~~wi~k~~~~l~~ 51 (306)
|..++++++-+=..++|++|+..|..|.++ .++...-.....+|...|..
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~R 71 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDR 71 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 345788888888888888888877766654 44444333344444444443
No 213
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=59.72 E-value=4.1 Score=36.09 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=16.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
.+|+.+|.+|+.+++|+.|+.+|+++..+
T Consensus 48 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 48 AIYSQLGNAYFYLHDYAKALEYHHHDLTL 76 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 35555666666666666666666555444
No 214
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=59.46 E-value=4.3 Score=36.43 Aligned_cols=30 Identities=13% Similarity=0.203 Sum_probs=26.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
+.+|+.+|.+|+.+++|+.|+.+|+++..+
T Consensus 126 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 126 AKSSGNLGNTLKVMGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999998887
No 215
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=58.86 E-value=12 Score=32.80 Aligned_cols=46 Identities=11% Similarity=-0.010 Sum_probs=31.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC--CCCchHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA--PGDSRFTNLIKECEE 47 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~--~~d~~~~~wi~k~~~ 47 (306)
+.+++..|..+..+|+++.|+..|++|.... +.+.....|...+..
T Consensus 203 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~ 250 (308)
T 2ond_A 203 PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAF 250 (308)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 3567777888888889999999999988863 212334555554433
No 216
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=57.93 E-value=11 Score=35.69 Aligned_cols=46 Identities=13% Similarity=0.027 Sum_probs=37.4
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 48 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~ 48 (306)
..+++.+|..+..+++++.|...|+++.++.|.+.. ..|+......
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~~ 366 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT-LVYIQYMKFA 366 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCch-HHHHHHHHHH
Confidence 467888999999999999999999999999998753 3676665443
No 217
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=57.40 E-value=4.5 Score=38.56 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=26.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGAS 30 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~ 30 (306)
+..|+..|..|.++++|++|+..|++|.+
T Consensus 371 a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 371 GVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999874
No 218
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=56.14 E-value=5.3 Score=30.00 Aligned_cols=29 Identities=10% Similarity=-0.037 Sum_probs=26.1
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGA 29 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~ 29 (306)
+|++||.-|..|+..+++..|+.+|.=|.
T Consensus 34 mA~~Y~~Da~~fl~kGD~v~Ala~isYa~ 62 (86)
T 2oo2_A 34 NIEAYISDSRYFLEKGDLVRAFECVVWAW 62 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 47899999999999999999999987654
No 219
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=55.66 E-value=5.4 Score=29.98 Aligned_cols=29 Identities=7% Similarity=-0.015 Sum_probs=26.3
Q ss_pred ChhhhhhhhhhhhccccHHHHHHHHHHhh
Q 021892 1 MSKAYWRKATACMKLEEYETAKVALEKGA 29 (306)
Q Consensus 1 ~aka~~R~Gia~~~l~~y~~A~~~l~~a~ 29 (306)
||++||.-|..|+..++|..|+.+|.=|.
T Consensus 38 mA~~Y~~Da~~fl~kGD~v~Ala~isYa~ 66 (87)
T 2pmr_A 38 RALNYRDDSVYYLEKGDHITSFGCITYAH 66 (87)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 47899999999999999999999997665
No 220
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=55.66 E-value=16 Score=27.78 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=33.5
Q ss_pred hhhhhhhhhccccHHHHHHHHHHhhccCCCC---chHHHHHHHHHHHHH
Q 021892 5 YWRKATACMKLEEYETAKVALEKGASLAPGD---SRFTNLIKECEERIA 50 (306)
Q Consensus 5 ~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d---~~~~~wi~k~~~~l~ 50 (306)
.+-.|--+|.+.+|.+|+..|+++..+.-+. .-..-++..|.++|+
T Consensus 56 ~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kkla 104 (106)
T 2vkj_A 56 LIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKKLA 104 (106)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHhc
Confidence 3445667899999999999999999775542 223356677777765
No 221
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=54.77 E-value=13 Score=33.72 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=26.5
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
.++|-+|++|-.|++|++|+..|+++..-
T Consensus 172 ~a~~~LG~al~~LG~~~eAl~~l~~a~~g 200 (282)
T 4f3v_A 172 AAGVAHGVAAANLALFTEAERRLTEANDS 200 (282)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhcC
Confidence 47999999999999999999999999853
No 222
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=54.59 E-value=17 Score=26.52 Aligned_cols=50 Identities=16% Similarity=0.093 Sum_probs=32.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc-------CCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL-------APGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~-------~~~d~~~~~wi~k~~~~l~~ 51 (306)
|..++++++-+=..++|++|+..|..|.++ .+++..-.....+|...|..
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~R 69 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNR 69 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 345678888887888888888887777664 44443334455555555544
No 223
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=54.08 E-value=16 Score=33.51 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=38.2
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+++..|.+++++++|++|+..|.++...+|+...+.-.+..++-.|..
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~ 149 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLN 149 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHC
Confidence 568899999999999999999999988877545666666666555554
No 224
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=53.69 E-value=8.2 Score=36.54 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=17.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAP 33 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~ 33 (306)
.+|...|++++..++++.|...|++|..++|
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~ 308 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEM 308 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC
Confidence 3455555555555666666666666666654
No 225
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=53.65 E-value=6.2 Score=37.12 Aligned_cols=33 Identities=12% Similarity=0.006 Sum_probs=25.4
Q ss_pred hhhhhhhhhhhhc----cccHHHHHHHHHHhhccCCC
Q 021892 2 SKAYWRKATACMK----LEEYETAKVALEKGASLAPG 34 (306)
Q Consensus 2 aka~~R~Gia~~~----l~~y~~A~~~l~~a~~~~~~ 34 (306)
+.|+++.|.+|+. .++++.|...|++|.+.+|+
T Consensus 399 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 399 SAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 4577788888887 78888888888888887743
No 226
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=52.07 E-value=20 Score=26.53 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=30.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhcc-------CCCCchHHHHHHHHHHHHHh
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASL-------APGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~-------~~~d~~~~~wi~k~~~~l~~ 51 (306)
.-++++++-+=..++|++|+..|..|.++ .++...-.....+|...|..
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~R 72 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDR 72 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH
Confidence 34677788888888888888887777654 44433333344455555544
No 227
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=49.96 E-value=19 Score=34.10 Aligned_cols=45 Identities=7% Similarity=-0.082 Sum_probs=34.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
..++++.|..+..+++++.|...|++|..+.|+ +..|+..+...+
T Consensus 46 ~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~---~~lw~~~~~~~~ 90 (530)
T 2ooe_A 46 GRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLH---IDLWKCYLSYVR 90 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC---hHHHHHHHHHHH
Confidence 456778888888888999999999999888873 456877775444
No 228
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=49.31 E-value=11 Score=34.30 Aligned_cols=42 Identities=7% Similarity=-0.176 Sum_probs=35.2
Q ss_pred hhhhhhhhhhhhccc--cHHHHHHHHHHhhccCCCCchHHHHHHHH
Q 021892 2 SKAYWRKATACMKLE--EYETAKVALEKGASLAPGDSRFTNLIKEC 45 (306)
Q Consensus 2 aka~~R~Gia~~~l~--~y~~A~~~l~~a~~~~~~d~~~~~wi~k~ 45 (306)
..|++.||.++.+|+ .|++|+..+..+..++|+...+ |-.+.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~a--W~~R~ 110 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQI--WNYRQ 110 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHH--HHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHH--HHHHH
Confidence 457889999999999 9999999999999999987553 44443
No 229
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.74 E-value=24 Score=27.68 Aligned_cols=30 Identities=20% Similarity=0.102 Sum_probs=22.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
|..++++++-+=..++|++|+.+|..|.++
T Consensus 18 Ai~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 18 AIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 345678888887888888888887777663
No 230
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=46.42 E-value=17 Score=34.13 Aligned_cols=36 Identities=19% Similarity=0.150 Sum_probs=32.3
Q ss_pred hhhhhhhhhhhhccc---cHHHHHHHHHHhhccCCCCch
Q 021892 2 SKAYWRKATACMKLE---EYETAKVALEKGASLAPGDSR 37 (306)
Q Consensus 2 aka~~R~Gia~~~l~---~y~~A~~~l~~a~~~~~~d~~ 37 (306)
+.|+++.|.+|+..+ +++.|+..|+++.+.++.+..
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~ 214 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQ 214 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHH
Confidence 458899999999999 999999999999999988766
No 231
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=44.54 E-value=27 Score=33.24 Aligned_cols=50 Identities=8% Similarity=0.052 Sum_probs=40.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhc-----cCCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~-----~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+.++.-.|.+|..+|+|++|...++++.+ |+++++.+...+.++-..+..
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~ 394 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG 394 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh
Confidence 45677889999999999999999999985 588888888877766554444
No 232
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=43.63 E-value=17 Score=40.57 Aligned_cols=47 Identities=13% Similarity=0.058 Sum_probs=33.8
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+.+|+|.|.+|.++++|++|..+|+.|.++. .++.+..++.-|=.++
T Consensus 1134 ~say~eVa~~~~~lGkyEEAIeyL~mArk~~-~e~~Idt~LafaYAKl 1180 (1630)
T 1xi4_A 1134 PSSYMEVVQAANTSGNWEELVKYLQMARKKA-RESYVETELIFALAKT 1180 (1630)
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc-ccccccHHHHHHHHhh
Confidence 4578888899999999999999998888887 3444444555443333
No 233
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=42.44 E-value=16 Score=29.66 Aligned_cols=25 Identities=24% Similarity=0.425 Sum_probs=22.3
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhh
Q 021892 247 ALNKFFQEIYADADEDTRRAMKKSF 271 (306)
Q Consensus 247 ~l~~~fq~iY~~adddtkRAM~KSf 271 (306)
.|..+|...|..+|+++|+.|++=+
T Consensus 85 ~l~~~f~~~~~~~d~~~r~k~~rL~ 109 (144)
T 1sz9_A 85 NLFNLYKRTYLLVDNTTRTKLINMF 109 (144)
T ss_dssp THHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4889999999999999999998844
No 234
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=40.17 E-value=15 Score=27.64 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=25.6
Q ss_pred hhhhhhhhhccccHHHHHHHHHHhhccCC
Q 021892 5 YWRKATACMKLEEYETAKVALEKGASLAP 33 (306)
Q Consensus 5 ~~R~Gia~~~l~~y~~A~~~l~~a~~~~~ 33 (306)
.|+.|+.+|+.++|=+|++.|+..=.-.+
T Consensus 4 ~~~~~~~lfn~g~~~eaHEvlE~~W~~~~ 32 (94)
T 2cwy_A 4 DWEEVLGLWRAGRYYEVHEVLEPYWLKAT 32 (94)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHhhCC
Confidence 58999999999999999999998776554
No 235
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=39.31 E-value=38 Score=24.70 Aligned_cols=47 Identities=17% Similarity=0.098 Sum_probs=31.2
Q ss_pred hhhhhhhhhccccHHHHHHHHHHhhcc------CCCCch-HHHHHHHHHHHHHhh
Q 021892 5 YWRKATACMKLEEYETAKVALEKGASL------APGDSR-FTNLIKECEERIAEE 52 (306)
Q Consensus 5 ~~R~Gia~~~l~~y~~A~~~l~~a~~~------~~~d~~-~~~wi~k~~~~l~~~ 52 (306)
+.++|-=|--+++|+.|+.+|+-+.+. ...|+. -.+|.. +..+|..+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~-~~~ei~~E 68 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQ-VWQEINVE 68 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHH-HHHHHHHH
Confidence 345666677889999999999988763 344644 556654 44444443
No 236
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=37.23 E-value=17 Score=32.12 Aligned_cols=32 Identities=9% Similarity=0.057 Sum_probs=27.9
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPG 34 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~ 34 (306)
.+++..|.+|+.+++|++|...|+++..+.+.
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 35677899999999999999999999988764
No 237
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=36.73 E-value=15 Score=34.41 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=26.5
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
|.|||+.|+++...++|.+|...|+.|.++
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 679999999999999999999988877654
No 238
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.56 E-value=16 Score=32.83 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=21.1
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLA 32 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~ 32 (306)
.+|+..|.+|+.+++|+.|+..|+++....
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 466777777777777777777777766553
No 239
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=35.79 E-value=20 Score=33.46 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=16.0
Q ss_pred hhhhhhhhhhhc----cccHHHHHHHHHHhhcc
Q 021892 3 KAYWRKATACMK----LEEYETAKVALEKGASL 31 (306)
Q Consensus 3 ka~~R~Gia~~~----l~~y~~A~~~l~~a~~~ 31 (306)
.|+|..|..|+. .++++.|...|+++.+.
T Consensus 76 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 108 (490)
T 2xm6_A 76 PAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK 108 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 455555555555 55555555555555544
No 240
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=35.16 E-value=24 Score=34.63 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=31.8
Q ss_pred hhhhhhhhhhhhcccc----------HHHHHHHHHHhhccCCCCc
Q 021892 2 SKAYWRKATACMKLEE----------YETAKVALEKGASLAPGDS 36 (306)
Q Consensus 2 aka~~R~Gia~~~l~~----------y~~A~~~l~~a~~~~~~d~ 36 (306)
..|++-||.++.++++ |++|+.++.++.+.+|+..
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y 107 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSY 107 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 4688999999999999 9999999999999999764
No 241
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=34.77 E-value=15 Score=33.02 Aligned_cols=31 Identities=0% Similarity=-0.002 Sum_probs=27.4
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAP 33 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~ 33 (306)
+|+.+.|.+|+.+++|+.|...|+.+..+-+
T Consensus 56 ~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 56 TSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999887643
No 242
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=33.70 E-value=32 Score=38.49 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=26.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 49 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l 49 (306)
+..|.|.|.+|.++++|+.|.+++.+|.. ...|.+.|...+
T Consensus 1221 A~ny~rLA~tLvkLge~q~AIEaarKA~n-------~~aWkev~~acv 1261 (1630)
T 1xi4_A 1221 VSNFGRLASTLVHLGEYQAAVDGARKANS-------TRTWKEVCFACV 1261 (1630)
T ss_pred hhHHHHHHHHHHHhCCHHHHHHHHHHhCC-------HHHHHHHHHHHh
Confidence 34567777777777777777777777732 366766555543
No 243
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=32.67 E-value=24 Score=26.89 Aligned_cols=26 Identities=23% Similarity=0.232 Sum_probs=20.2
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhh
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGA 29 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~ 29 (306)
.|=||.-+|..-++|++|..+.++|.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 45699999999999999976555544
No 244
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=32.53 E-value=54 Score=31.65 Aligned_cols=49 Identities=8% Similarity=-0.019 Sum_probs=38.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhc-----cCCCCchHHHHHHHHHHHHH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIA 50 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~-----~~~~d~~~~~wi~k~~~~l~ 50 (306)
+.++.-.|.+|..+++|++|...++++.+ |+++++.+..-+..+-..+.
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~ 404 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW 404 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999875 58888887776665544443
No 245
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=32.38 E-value=23 Score=33.45 Aligned_cols=37 Identities=16% Similarity=0.038 Sum_probs=32.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~ 38 (306)
+.+|.-.|.++...|++++|.+.|++|..++|.+.++
T Consensus 310 ~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~ 346 (372)
T 3ly7_A 310 WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTL 346 (372)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChH
Confidence 3567889999999999999999999999999988653
No 246
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=30.95 E-value=25 Score=29.17 Aligned_cols=23 Identities=9% Similarity=0.421 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHH
Q 021892 247 ALNKFFQEIYADADEDTRRAMKK 269 (306)
Q Consensus 247 ~l~~~fq~iY~~adddtkRAM~K 269 (306)
-+-.||..+|..+++|+|+.|.|
T Consensus 100 ~i~~l~~~~~~~~~~~~k~Ki~k 122 (157)
T 3clj_A 100 VIQELLSDAIAKSNQDHKEKIRM 122 (157)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Confidence 36788999999999999999977
No 247
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=29.98 E-value=28 Score=31.93 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=29.1
Q ss_pred hhhhhhhhhhhcc-----ccHHHHHHHHHHhhccCCCC
Q 021892 3 KAYWRKATACMKL-----EEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 3 ka~~R~Gia~~~l-----~~y~~A~~~l~~a~~~~~~d 35 (306)
.||.=+|..|+.+ ++.+.|..+|++|.+++|+.
T Consensus 200 sA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 200 AVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 4777789888886 99999999999999999964
No 248
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=29.66 E-value=24 Score=32.98 Aligned_cols=30 Identities=3% Similarity=0.011 Sum_probs=25.7
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhcc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASL 31 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~ 31 (306)
|.|||+.|+.+...++|-+|...|+.|.++
T Consensus 252 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 281 (363)
T 3rau_A 252 AVAHLHMGKQAEEQQKFGERVAYFQSALDK 281 (363)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHhhhHHHHHHHHHHHHHH
Confidence 679999999999999999998887776553
No 249
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=28.75 E-value=25 Score=32.98 Aligned_cols=51 Identities=10% Similarity=0.177 Sum_probs=35.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC-------CCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA-------PGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~-------~~d~~~~~wi~k~~~~l~~~ 52 (306)
|.|||+.|+.+...++|.+|...|+.|.++- -.-..+......++..+++.
T Consensus 275 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~l~~l~~~i~~~l~~a 332 (380)
T 3c3r_A 275 ANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALAAA 332 (380)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHH
Confidence 6789999999999999999999888776531 11123455555666655554
No 250
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=28.11 E-value=42 Score=31.38 Aligned_cols=30 Identities=13% Similarity=-0.112 Sum_probs=14.9
Q ss_pred hhhhhhhhhhhc----cccHHHHHHHHHHhhccC
Q 021892 3 KAYWRKATACMK----LEEYETAKVALEKGASLA 32 (306)
Q Consensus 3 ka~~R~Gia~~~----l~~y~~A~~~l~~a~~~~ 32 (306)
.|+|+.|..|+. .++++.|...|++|.+.+
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 445555544444 335555555555555443
No 251
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=28.07 E-value=68 Score=30.23 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=38.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhc-----cCCCCchHHHHHHHHHHHHHh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~-----~~~~d~~~~~wi~k~~~~l~~ 51 (306)
+..+.-.|.+|..+++|++|+..++++.. |++.++.+..-+..+-.....
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~ 383 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH 383 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh
Confidence 34567789999999999999999999875 578888877766665444443
No 252
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.67 E-value=27 Score=33.05 Aligned_cols=51 Identities=12% Similarity=0.119 Sum_probs=40.9
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccCCC-CchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLAPG-DSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~-d~~~~~wi~k~~~~l~~~ 52 (306)
..+++++|-.|+..|+|+.|..+|.+...+..+ ...+..++....-.|...
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~ 182 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYN 182 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999987543 345777777776666553
No 253
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=26.40 E-value=16 Score=35.46 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=11.5
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHh
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKG 28 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a 28 (306)
-+++..|.+||+.|+|++|+.+|..+
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a 148 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV 148 (449)
T ss_dssp --------------CTTTHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 37889999999999999999999987
No 254
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=26.24 E-value=37 Score=33.32 Aligned_cols=33 Identities=3% Similarity=-0.007 Sum_probs=19.9
Q ss_pred hhhhhhhhhhhccc--cHHHHHHHHHHhhccCCCC
Q 021892 3 KAYWRKATACMKLE--EYETAKVALEKGASLAPGD 35 (306)
Q Consensus 3 ka~~R~Gia~~~l~--~y~~A~~~l~~a~~~~~~d 35 (306)
.||+-||.++.+++ +|++|+.++.++.+++|.+
T Consensus 108 ~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N 142 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPNWARELELCARFLEADERN 142 (567)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc
Confidence 35556666666666 4466666666666666543
No 255
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=25.99 E-value=41 Score=29.56 Aligned_cols=33 Identities=9% Similarity=-0.036 Sum_probs=21.8
Q ss_pred hhhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 3 KAYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 3 ka~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
.+++.+|..++..++|+.|+..|+++..+.|.+
T Consensus 15 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~ 47 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPDEAERLAKLALEELPPG 47 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC
Confidence 345566677777777777777777776666543
No 256
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=25.44 E-value=41 Score=30.35 Aligned_cols=37 Identities=5% Similarity=0.027 Sum_probs=31.7
Q ss_pred hhhhhhhhhhhhcccc------HHHHHHHHHHhhccCCCCchH
Q 021892 2 SKAYWRKATACMKLEE------YETAKVALEKGASLAPGDSRF 38 (306)
Q Consensus 2 aka~~R~Gia~~~l~~------y~~A~~~l~~a~~~~~~d~~~ 38 (306)
.-|+.-||.+++++++ |++++.++.++..++|.|...
T Consensus 180 ~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~Sa 222 (306)
T 3dra_A 180 NSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPST 222 (306)
T ss_dssp HHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccH
Confidence 4577778888999988 999999999999999988653
No 257
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=24.87 E-value=69 Score=29.28 Aligned_cols=47 Identities=17% Similarity=0.137 Sum_probs=32.1
Q ss_pred hhhhhhhhhhhc-cccHHHHHHHHHHhhccCCCC-chHHHHHHHHHHHH
Q 021892 3 KAYWRKATACMK-LEEYETAKVALEKGASLAPGD-SRFTNLIKECEERI 49 (306)
Q Consensus 3 ka~~R~Gia~~~-l~~y~~A~~~l~~a~~~~~~d-~~~~~wi~k~~~~l 49 (306)
.+++-.|-.++. .++|+.|..+|+++...+|.. +....+-.-.+.++
T Consensus 240 d~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~~q~eA 288 (301)
T 3u64_A 240 DHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVILSQKRA 288 (301)
T ss_dssp HHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHHH
Confidence 345555665655 599999999999999999874 55554444444333
No 258
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=24.37 E-value=38 Score=28.15 Aligned_cols=32 Identities=6% Similarity=-0.104 Sum_probs=27.2
Q ss_pred hhhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 4 AYWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 4 a~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
.-|+.|+.+|+.++|=+|++.|+..=.-.+..
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~ 65 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRG 65 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCC
Confidence 35899999999999999999999987765543
No 259
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=24.10 E-value=95 Score=28.71 Aligned_cols=41 Identities=7% Similarity=-0.076 Sum_probs=31.7
Q ss_pred hhhhhhhhhhhhccc-cHHHHHHHHHHhhccCCCCchHHHHHHH
Q 021892 2 SKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTNLIKE 44 (306)
Q Consensus 2 aka~~R~Gia~~~l~-~y~~A~~~l~~a~~~~~~d~~~~~wi~k 44 (306)
..|++-||.++.+++ .|++|+..+..+...+|+.- ..|-.+
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny--~aW~hR 129 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSY--QVWHHR 129 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH--HHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH--HHHHHH
Confidence 356778889999998 59999999999999998754 444443
No 260
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=22.86 E-value=28 Score=32.66 Aligned_cols=29 Identities=10% Similarity=-0.044 Sum_probs=25.6
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhc
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGAS 30 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~ 30 (306)
|.|||+.|+.+...++|.+|...|+.|.+
T Consensus 257 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~ 285 (392)
T 1zb1_A 257 SLSAYYHGLHLEEENRVGEAIAFLDFSMQ 285 (392)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 67899999999999999999988887764
No 261
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=22.40 E-value=78 Score=26.77 Aligned_cols=31 Identities=10% Similarity=0.012 Sum_probs=26.9
Q ss_pred hhhhhhhhhccccHHHHHHHHHHhhccCCCC
Q 021892 5 YWRKATACMKLEEYETAKVALEKGASLAPGD 35 (306)
Q Consensus 5 ~~R~Gia~~~l~~y~~A~~~l~~a~~~~~~d 35 (306)
+|=.|..++..++|.+|..+|..|....|.+
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4557888999999999999999999997754
No 262
>3may_A RV0203, possible exported protein; helical protein, heme-binding protein; 2.50A {Mycobacterium tuberculosis}
Probab=21.94 E-value=55 Score=25.13 Aligned_cols=32 Identities=19% Similarity=0.160 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhhhcCCee
Q 021892 247 ALNKFFQEIYADADEDTRRAMKKSFVESNGTV 278 (306)
Q Consensus 247 ~l~~~fq~iY~~adddtkRAM~KSf~ES~GTv 278 (306)
.+|.||-.|+.....+..|+=.++|.+.|=.|
T Consensus 31 ~vN~~~T~~~~q~p~~q~~a~v~~Yf~aNPqv 62 (101)
T 3may_A 31 ETNQVMTAVLQQQVGPGSVASLKAHFEANPKV 62 (101)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHCHHH
T ss_pred CHHHHHHHHHccCChHHHHHHHHHHHHhCcHH
Confidence 48999999999988889999999999987443
No 263
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=21.70 E-value=69 Score=24.93 Aligned_cols=39 Identities=21% Similarity=0.239 Sum_probs=29.9
Q ss_pred hhhhhhccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHh
Q 021892 8 KATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 51 (306)
Q Consensus 8 ~Gia~~~l~~y~~A~~~l~~a~~~~~~d~~~~~wi~k~~~~l~~ 51 (306)
|-..+.+.|+|++|+..++.-. -+.|.-|.+-|+-++.-
T Consensus 46 R~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl 84 (116)
T 2p58_C 46 RLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGL 84 (116)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTC
T ss_pred HHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhccc
Confidence 4567899999999988765422 36799999999887654
No 264
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=20.25 E-value=41 Score=34.72 Aligned_cols=13 Identities=31% Similarity=0.902 Sum_probs=11.2
Q ss_pred HHHHHHHHhCCCCHHHH
Q 021892 248 LNKFFQEIYADADEDTR 264 (306)
Q Consensus 248 l~~~fq~iY~~adddtk 264 (306)
|++||--|| +|-|
T Consensus 586 LDnLFmvLY----EDLR 598 (754)
T 4gns_B 586 LDDLFLDLY----QDLK 598 (754)
T ss_dssp HHHHHHHHH----HHHH
T ss_pred HHHHHHHHH----HHhH
Confidence 899999999 6666
No 265
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=20.16 E-value=44 Score=34.00 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=36.2
Q ss_pred hhhhhhhhhhhhccccHHHHHHHHHHhhccC-------CCCchHHHHHHHHHHHHHhh
Q 021892 2 SKAYWRKATACMKLEEYETAKVALEKGASLA-------PGDSRFTNLIKECEERIAEE 52 (306)
Q Consensus 2 aka~~R~Gia~~~l~~y~~A~~~l~~a~~~~-------~~d~~~~~wi~k~~~~l~~~ 52 (306)
|.|||+.|+++...++|.+|...|+.|..+- ..-..+......++..+...
T Consensus 260 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~~~~l~~~i~~~l~~~ 317 (704)
T 2xs1_A 260 ANAEYHQSILAKQQYYFGEEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALAAA 317 (704)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHH
Confidence 6789999999999999999999998876421 11123455556666666554
Done!