Query 021893
Match_columns 306
No_of_seqs 122 out of 1216
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 06:27:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021893.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021893hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 5.2E-54 1.1E-58 373.2 28.7 272 2-282 129-400 (404)
2 COG0160 GabT 4-aminobutyrate a 100.0 1.7E-46 3.7E-51 335.4 30.3 276 2-281 143-446 (447)
3 KOG1402 Ornithine aminotransfe 100.0 6E-47 1.3E-51 315.8 25.1 275 2-278 150-426 (427)
4 PRK11522 putrescine--2-oxoglut 100.0 1.5E-44 3.3E-49 331.8 31.1 278 2-283 170-454 (459)
5 PLN02624 ornithine-delta-amino 100.0 2.1E-44 4.5E-49 333.3 32.3 303 3-305 167-473 (474)
6 TIGR03372 putres_am_tran putre 100.0 2.4E-44 5.1E-49 328.4 31.0 273 2-277 163-442 (442)
7 COG0161 BioA Adenosylmethionin 100.0 2.8E-44 6.1E-49 319.2 27.1 278 2-282 137-445 (449)
8 PRK07678 aminotransferase; Val 100.0 8.9E-43 1.9E-47 320.5 31.8 278 2-281 137-450 (451)
9 TIGR03246 arg_catab_astC succi 100.0 8.5E-43 1.8E-47 317.3 30.8 271 2-278 124-394 (397)
10 PRK06943 adenosylmethionine--8 100.0 8.2E-43 1.8E-47 320.4 30.7 276 2-281 146-447 (453)
11 PRK05965 hypothetical protein; 100.0 9.7E-43 2.1E-47 320.7 30.6 277 2-281 139-448 (459)
12 PRK07482 hypothetical protein; 100.0 1.6E-42 3.4E-47 319.5 31.1 278 2-281 143-455 (461)
13 PRK04612 argD acetylornithine 100.0 2.1E-42 4.6E-47 314.2 31.1 276 2-283 131-406 (408)
14 PRK08742 adenosylmethionine--8 100.0 1.4E-42 3E-47 319.6 30.0 276 2-281 161-468 (472)
15 PLN00144 acetylornithine trans 100.0 1.6E-42 3.6E-47 313.2 29.7 270 2-281 111-381 (382)
16 PRK07030 adenosylmethionine--8 100.0 2.3E-42 5E-47 318.2 31.0 276 2-281 139-447 (466)
17 PRK06938 diaminobutyrate--2-ox 100.0 2.3E-42 4.9E-47 318.1 30.6 276 2-281 153-461 (464)
18 TIGR02407 ectoine_ectB diamino 100.0 2.8E-42 6E-47 314.5 30.7 272 2-278 125-411 (412)
19 PRK12381 bifunctional succinyl 100.0 3.9E-42 8.4E-47 313.8 30.6 276 2-284 128-403 (406)
20 PRK07483 hypothetical protein; 100.0 4.1E-42 8.8E-47 315.3 30.2 279 2-282 122-439 (443)
21 PRK07481 hypothetical protein; 100.0 6.2E-42 1.3E-46 314.8 31.2 278 2-282 136-447 (449)
22 PRK09264 diaminobutyrate--2-ox 100.0 5.5E-42 1.2E-46 314.0 29.9 278 2-285 129-421 (425)
23 PLN02760 4-aminobutyrate:pyruv 100.0 1.3E-41 2.9E-46 315.2 30.6 276 2-281 183-492 (504)
24 PRK07495 4-aminobutyrate amino 100.0 2.8E-41 6E-46 308.4 31.9 278 2-282 127-423 (425)
25 PRK06916 adenosylmethionine--8 100.0 1.2E-41 2.6E-46 313.6 29.2 278 2-283 148-458 (460)
26 PRK08593 4-aminobutyrate amino 100.0 2.5E-41 5.5E-46 310.4 31.1 279 2-283 129-432 (445)
27 PRK06931 diaminobutyrate--2-ox 100.0 2.2E-41 4.7E-46 311.5 30.5 277 2-282 147-456 (459)
28 PRK07986 adenosylmethionine--8 100.0 2.2E-41 4.8E-46 308.6 29.2 271 2-278 134-422 (428)
29 PRK01278 argD acetylornithine 100.0 4.5E-41 9.7E-46 305.9 31.1 268 2-278 120-387 (389)
30 PRK06105 aminotransferase; Pro 100.0 4E-41 8.8E-46 310.1 31.1 277 2-282 141-451 (460)
31 PRK13360 omega amino acid--pyr 100.0 6E-41 1.3E-45 307.5 31.2 276 2-281 138-441 (442)
32 PRK06058 4-aminobutyrate amino 100.0 6.5E-41 1.4E-45 308.2 31.4 275 2-278 143-441 (443)
33 PRK06062 hypothetical protein; 100.0 5.3E-41 1.1E-45 308.6 30.5 277 2-282 138-447 (451)
34 TIGR00709 dat 2,4-diaminobutyr 100.0 6.1E-41 1.3E-45 308.1 30.7 276 2-281 128-436 (442)
35 PRK06777 4-aminobutyrate amino 100.0 8.5E-41 1.8E-45 305.5 31.4 275 2-278 127-420 (421)
36 PRK07036 hypothetical protein; 100.0 8.4E-41 1.8E-45 308.2 31.4 276 2-281 144-453 (466)
37 PRK06173 adenosylmethionine--8 100.0 3.8E-41 8.2E-46 307.4 28.8 274 2-282 136-427 (429)
38 PRK05639 4-aminobutyrate amino 100.0 6E-41 1.3E-45 308.1 30.3 277 2-282 139-445 (457)
39 PRK06541 hypothetical protein; 100.0 9.7E-41 2.1E-45 307.3 31.5 277 2-281 144-456 (460)
40 PRK09792 4-aminobutyrate trans 100.0 6.5E-41 1.4E-45 306.3 29.8 275 2-278 127-420 (421)
41 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.1E-40 2.5E-45 305.2 31.4 275 2-278 120-419 (420)
42 PRK03715 argD acetylornithine 100.0 5.6E-41 1.2E-45 304.1 28.4 268 2-281 124-394 (395)
43 PRK08117 4-aminobutyrate amino 100.0 1.1E-40 2.5E-45 306.4 30.6 278 2-282 129-431 (433)
44 PRK04073 rocD ornithine--oxo-a 100.0 8.8E-41 1.9E-45 304.4 28.8 264 2-277 131-395 (396)
45 PRK09221 beta alanine--pyruvat 100.0 1.6E-40 3.5E-45 304.8 30.4 276 2-281 141-444 (445)
46 PRK06082 4-aminobutyrate amino 100.0 2E-40 4.3E-45 305.1 31.0 275 2-281 156-452 (459)
47 PRK07480 putative aminotransfe 100.0 1.7E-40 3.8E-45 305.3 30.0 278 2-283 143-451 (456)
48 PRK05093 argD bifunctional N-s 100.0 3.1E-40 6.7E-45 301.4 31.0 273 2-281 129-401 (403)
49 PRK06917 hypothetical protein; 100.0 2.6E-40 5.6E-45 303.7 30.6 280 2-283 123-440 (447)
50 PRK05964 adenosylmethionine--8 100.0 2.2E-40 4.7E-45 303.8 30.0 276 2-281 134-423 (423)
51 PRK05630 adenosylmethionine--8 100.0 2.2E-40 4.9E-45 302.0 28.5 268 2-278 132-419 (422)
52 PRK08360 4-aminobutyrate amino 100.0 1E-39 2.2E-44 299.4 32.0 278 2-283 127-429 (443)
53 KOG1401 Acetylornithine aminot 100.0 2E-40 4.4E-45 284.8 25.1 273 3-282 149-432 (433)
54 PRK05769 4-aminobutyrate amino 100.0 2.3E-39 5E-44 297.1 31.7 273 2-278 141-438 (441)
55 PRK04013 argD acetylornithine/ 100.0 1.5E-39 3.2E-44 290.4 27.3 255 2-281 107-361 (364)
56 PRK03244 argD acetylornithine 100.0 3.2E-39 6.9E-44 294.6 29.5 269 2-282 128-396 (398)
57 PRK06918 4-aminobutyrate amino 100.0 5.3E-39 1.1E-43 296.4 31.2 277 2-281 141-444 (451)
58 PRK12403 putative aminotransfe 100.0 5.6E-39 1.2E-43 295.9 30.9 277 2-282 147-454 (460)
59 TIGR01885 Orn_aminotrans ornit 100.0 8.2E-39 1.8E-43 292.0 30.4 272 2-277 128-400 (401)
60 PTZ00125 ornithine aminotransf 100.0 1.1E-38 2.5E-43 291.2 31.3 277 2-283 122-398 (400)
61 PRK02936 argD acetylornithine 100.0 9E-39 2E-43 289.7 30.1 266 2-277 112-377 (377)
62 TIGR00699 GABAtrns_euk 4-amino 100.0 5.5E-39 1.2E-43 293.6 28.6 265 3-277 176-464 (464)
63 COG0001 HemL Glutamate-1-semia 100.0 3.6E-38 7.8E-43 277.1 28.3 275 2-282 135-430 (432)
64 TIGR00508 bioA adenosylmethion 100.0 3.9E-38 8.4E-43 288.2 29.5 271 2-278 137-425 (427)
65 PRK08297 L-lysine aminotransfe 100.0 2.3E-38 5.1E-43 290.4 27.6 271 2-281 148-442 (443)
66 PRK06148 hypothetical protein; 100.0 4.2E-38 9E-43 312.8 31.3 276 2-281 706-1011(1013)
67 PRK12389 glutamate-1-semialdeh 100.0 7.1E-38 1.5E-42 286.9 30.2 271 2-278 135-426 (428)
68 PLN02974 adenosylmethionine-8- 100.0 7.5E-38 1.6E-42 301.2 31.1 274 2-277 472-816 (817)
69 PRK00854 rocD ornithine--oxo-a 100.0 1.1E-37 2.3E-42 284.9 29.8 268 3-278 133-400 (401)
70 PRK02627 acetylornithine amino 100.0 1.7E-37 3.6E-42 283.2 30.2 268 3-281 128-395 (396)
71 KOG1404 Alanine-glyoxylate ami 100.0 1.1E-37 2.4E-42 266.1 23.9 269 3-273 136-432 (442)
72 PRK00615 glutamate-1-semialdeh 100.0 8.8E-37 1.9E-41 278.6 30.3 272 2-278 136-427 (433)
73 PRK06149 hypothetical protein; 100.0 7.1E-37 1.5E-41 303.9 32.2 275 2-278 667-969 (972)
74 TIGR03251 LAT_fam L-lysine 6-t 100.0 7.9E-37 1.7E-41 280.0 28.8 267 2-275 141-430 (431)
75 PLN02482 glutamate-1-semialdeh 100.0 1.1E-36 2.4E-41 280.0 29.3 272 2-278 181-472 (474)
76 PRK04260 acetylornithine amino 100.0 1.4E-36 3.1E-41 274.9 29.5 266 2-277 110-375 (375)
77 cd00610 OAT_like Acetyl ornith 100.0 1.8E-36 3.8E-41 278.0 30.2 274 2-277 122-413 (413)
78 PRK08088 4-aminobutyrate amino 100.0 2.9E-36 6.3E-41 276.7 31.6 275 2-278 128-422 (425)
79 PF00202 Aminotran_3: Aminotra 100.0 1.1E-36 2.5E-41 270.8 22.0 220 2-223 108-338 (339)
80 TIGR00713 hemL glutamate-1-sem 100.0 1.2E-35 2.5E-40 273.0 28.4 272 2-278 130-421 (423)
81 PRK07046 aminotransferase; Val 100.0 2.3E-35 4.9E-40 271.0 29.3 270 2-281 156-451 (453)
82 PRK00062 glutamate-1-semialdeh 100.0 3.5E-35 7.6E-40 269.3 27.5 274 2-281 132-425 (426)
83 TIGR00707 argD acetylornithine 100.0 3.3E-34 7.1E-39 260.1 28.7 265 2-277 115-379 (379)
84 KOG1405 4-aminobutyrate aminot 100.0 4.5E-31 9.8E-36 222.7 21.7 266 3-278 193-482 (484)
85 PRK06209 glutamate-1-semialdeh 100.0 3.6E-29 7.7E-34 229.5 27.2 264 2-282 130-407 (431)
86 COG0436 Aspartate/tyrosine/aro 100.0 8.1E-28 1.8E-32 217.3 19.1 264 3-281 90-392 (393)
87 KOG1403 Predicted alanine-glyo 100.0 1.9E-27 4E-32 197.1 18.6 278 2-283 128-440 (452)
88 PLN02822 serine palmitoyltrans 99.9 3.4E-26 7.3E-31 212.2 20.8 252 3-281 193-478 (481)
89 PRK13393 5-aminolevulinate syn 99.9 1.1E-24 2.3E-29 199.4 21.5 247 4-282 132-398 (406)
90 COG0156 BioF 7-keto-8-aminopel 99.9 1.1E-24 2.3E-29 193.6 20.4 255 3-276 100-387 (388)
91 TIGR01821 5aminolev_synth 5-am 99.9 3.1E-24 6.7E-29 196.2 21.6 246 4-281 132-397 (402)
92 PRK07324 transaminase; Validat 99.9 3.3E-24 7.2E-29 193.9 19.7 266 3-281 81-371 (373)
93 COG1168 MalY Bifunctional PLP- 99.9 5.7E-24 1.2E-28 182.8 19.4 264 4-278 85-385 (388)
94 PRK09064 5-aminolevulinate syn 99.9 8.3E-24 1.8E-28 193.7 21.7 223 40-282 157-399 (407)
95 PRK07682 hypothetical protein; 99.9 2.2E-24 4.7E-29 195.7 17.6 263 4-281 83-377 (378)
96 PRK07681 aspartate aminotransf 99.9 6.5E-24 1.4E-28 193.8 19.4 258 3-275 94-384 (399)
97 PRK06207 aspartate aminotransf 99.9 1.6E-23 3.5E-28 191.4 21.4 265 3-281 103-403 (405)
98 PLN00175 aminotransferase fami 99.9 6.8E-24 1.5E-28 194.2 18.9 262 4-278 117-412 (413)
99 PLN03227 serine palmitoyltrans 99.9 3.3E-23 7E-28 188.2 21.9 232 39-282 106-384 (392)
100 PRK07505 hypothetical protein; 99.9 3.3E-23 7.1E-28 189.3 20.8 246 3-278 135-398 (402)
101 PRK06348 aspartate aminotransf 99.9 3.6E-23 7.9E-28 188.0 20.5 261 3-276 90-382 (384)
102 PRK06108 aspartate aminotransf 99.9 4.5E-23 9.7E-28 187.3 20.5 262 3-278 85-381 (382)
103 KOG0257 Kynurenine aminotransf 99.9 2.5E-24 5.5E-29 186.7 10.3 261 3-275 94-415 (420)
104 PLN02955 8-amino-7-oxononanoat 99.9 7.7E-23 1.7E-27 185.8 20.4 218 39-282 228-463 (476)
105 PRK09148 aminotransferase; Val 99.9 2.6E-23 5.7E-28 190.1 17.0 268 4-281 94-391 (405)
106 TIGR01822 2am3keto_CoA 2-amino 99.9 1.2E-22 2.6E-27 185.2 21.2 262 3-281 99-390 (393)
107 PRK08636 aspartate aminotransf 99.9 9.9E-23 2.1E-27 186.2 19.9 268 4-281 97-401 (403)
108 PRK15481 transcriptional regul 99.9 1.3E-22 2.9E-27 186.9 20.8 260 3-278 142-430 (431)
109 PRK07309 aromatic amino acid a 99.9 2E-22 4.3E-27 183.6 21.3 269 3-282 92-390 (391)
110 PRK07366 succinyldiaminopimela 99.9 7.5E-23 1.6E-27 186.2 18.5 261 4-277 94-388 (388)
111 PRK08175 aminotransferase; Val 99.9 1.7E-22 3.6E-27 184.3 20.6 268 4-281 93-390 (395)
112 PRK05957 aspartate aminotransf 99.9 9.8E-23 2.1E-27 185.4 18.7 264 4-281 91-386 (389)
113 PRK08068 transaminase; Reviewe 99.9 1.1E-22 2.4E-27 185.2 18.7 258 4-276 96-386 (389)
114 PRK05942 aspartate aminotransf 99.9 1.6E-22 3.5E-27 184.3 19.5 258 4-276 99-389 (394)
115 PRK09147 succinyldiaminopimela 99.9 1.7E-22 3.8E-27 184.3 19.3 257 4-278 92-395 (396)
116 PRK06225 aspartate aminotransf 99.9 3.2E-22 6.8E-27 181.6 20.8 219 46-282 146-378 (380)
117 TIGR03540 DapC_direct LL-diami 99.9 1.9E-22 4.2E-27 183.3 18.9 257 4-275 93-382 (383)
118 PRK07179 hypothetical protein; 99.9 6E-22 1.3E-26 181.3 22.0 257 4-281 116-399 (407)
119 COG1167 ARO8 Transcriptional r 99.9 4.1E-22 8.9E-27 184.0 20.8 267 3-281 156-456 (459)
120 PRK13392 5-aminolevulinate syn 99.9 3.8E-22 8.3E-27 182.8 20.5 224 40-281 157-398 (410)
121 PRK09276 LL-diaminopimelate am 99.9 2E-22 4.4E-27 183.2 18.4 257 4-275 95-384 (385)
122 PRK08912 hypothetical protein; 99.9 2.6E-22 5.6E-27 182.7 18.9 263 4-278 89-385 (387)
123 PRK06290 aspartate aminotransf 99.9 2.1E-22 4.6E-27 184.0 18.0 267 4-281 108-406 (410)
124 PRK12414 putative aminotransfe 99.9 4.8E-22 1E-26 180.6 19.5 259 4-275 92-383 (384)
125 PRK08960 hypothetical protein; 99.9 9.2E-22 2E-26 179.0 21.4 259 4-278 94-386 (387)
126 TIGR03537 DapC succinyldiamino 99.9 7.5E-22 1.6E-26 177.2 20.5 257 4-275 62-349 (350)
127 PRK03317 histidinol-phosphate 99.9 3.3E-22 7.2E-27 180.7 17.8 253 3-278 89-363 (368)
128 PRK05958 8-amino-7-oxononanoat 99.9 1.9E-21 4.2E-26 176.7 22.9 222 40-277 148-385 (385)
129 PRK09082 methionine aminotrans 99.9 2.9E-22 6.3E-27 182.2 17.2 259 4-275 93-385 (386)
130 PRK08361 aspartate aminotransf 99.9 5.9E-22 1.3E-26 180.5 19.2 263 3-278 94-389 (391)
131 PLN02483 serine palmitoyltrans 99.9 1.7E-21 3.8E-26 181.2 22.2 227 39-282 209-468 (489)
132 PRK06939 2-amino-3-ketobutyrat 99.9 1.6E-21 3.5E-26 177.9 20.6 225 40-281 151-394 (397)
133 PRK07683 aminotransferase A; V 99.9 1.3E-21 2.8E-26 177.9 19.6 261 4-278 91-382 (387)
134 PRK07777 aminotransferase; Val 99.9 7.6E-22 1.6E-26 179.6 17.8 220 46-278 148-385 (387)
135 PLN02450 1-aminocyclopropane-1 99.9 2.3E-21 5.1E-26 179.8 21.2 269 3-282 112-432 (468)
136 PRK06855 aminotransferase; Val 99.9 1.8E-21 3.9E-26 179.3 19.5 225 46-280 158-429 (433)
137 PLN02187 rooty/superroot1 99.9 2.7E-21 5.9E-26 179.0 20.7 273 3-287 132-445 (462)
138 PLN00143 tyrosine/nicotianamin 99.9 3.3E-21 7.2E-26 176.4 21.0 268 3-283 98-407 (409)
139 PRK05764 aspartate aminotransf 99.9 2.7E-21 5.9E-26 176.3 20.3 224 46-281 153-392 (393)
140 PLN02607 1-aminocyclopropane-1 99.9 2.7E-21 5.9E-26 178.1 20.3 265 3-282 121-439 (447)
141 TIGR01264 tyr_amTase_E tyrosin 99.9 3.2E-21 6.9E-26 176.3 20.6 263 4-278 97-398 (401)
142 PRK02610 histidinol-phosphate 99.9 2.1E-21 4.6E-26 175.7 19.1 260 4-281 93-372 (374)
143 TIGR01825 gly_Cac_T_rel pyrido 99.9 7.8E-21 1.7E-25 172.8 22.6 222 42-281 144-382 (385)
144 KOG1360 5-aminolevulinate synt 99.9 4E-21 8.6E-26 165.2 19.1 224 39-282 281-526 (570)
145 PRK08153 histidinol-phosphate 99.9 2.7E-21 5.8E-26 174.8 19.2 218 46-283 143-368 (369)
146 PLN02376 1-aminocyclopropane-1 99.9 6.5E-21 1.4E-25 177.5 22.2 266 3-282 120-440 (496)
147 TIGR00858 bioF 8-amino-7-oxono 99.9 4.7E-21 1E-25 172.5 20.7 218 40-274 125-360 (360)
148 PRK06425 histidinol-phosphate 99.9 2.4E-21 5.2E-26 172.6 17.6 252 3-277 58-331 (332)
149 TIGR03538 DapC_gpp succinyldia 99.9 4.3E-21 9.4E-26 174.9 19.2 255 4-276 92-392 (393)
150 PTZ00433 tyrosine aminotransfe 99.9 7.8E-21 1.7E-25 174.2 20.8 267 3-282 105-410 (412)
151 PRK05937 8-amino-7-oxononanoat 99.9 1.6E-20 3.5E-25 169.7 22.4 242 4-283 96-353 (370)
152 PRK01533 histidinol-phosphate 99.9 1.7E-21 3.6E-26 175.7 15.9 257 3-283 82-358 (366)
153 PLN00145 tyrosine/nicotianamin 99.9 9.7E-21 2.1E-25 174.1 21.2 268 3-283 118-427 (430)
154 PRK06107 aspartate aminotransf 99.9 6.3E-21 1.4E-25 174.3 19.8 266 4-281 95-401 (402)
155 PLN02656 tyrosine transaminase 99.9 1.1E-20 2.3E-25 173.1 21.3 267 3-282 97-405 (409)
156 PRK07865 N-succinyldiaminopime 99.9 3E-21 6.4E-26 174.3 17.4 252 3-274 87-363 (364)
157 PRK13355 bifunctional HTH-doma 99.9 4.4E-21 9.5E-26 180.4 18.9 265 4-281 210-515 (517)
158 PRK07550 hypothetical protein; 99.9 7.6E-21 1.7E-25 172.9 19.6 261 3-276 91-384 (386)
159 PRK07568 aspartate aminotransf 99.9 1.1E-20 2.3E-25 172.7 20.3 221 46-283 151-395 (397)
160 TIGR03392 FeS_syn_CsdA cystein 99.9 3.7E-20 8E-25 169.1 23.7 211 46-278 146-394 (398)
161 PRK07337 aminotransferase; Val 99.9 9.5E-21 2.1E-25 172.4 19.6 218 46-277 152-387 (388)
162 TIGR03539 DapC_actino succinyl 99.9 4E-21 8.7E-26 172.9 17.0 251 3-273 81-356 (357)
163 PF00155 Aminotran_1_2: Aminot 99.9 2.3E-21 5E-26 174.9 15.0 216 44-273 129-363 (363)
164 PTZ00377 alanine aminotransfer 99.9 6.5E-21 1.4E-25 177.9 18.4 269 3-281 139-476 (481)
165 PTZ00376 aspartate aminotransf 99.9 6E-21 1.3E-25 174.5 17.8 217 46-278 162-402 (404)
166 PRK08363 alanine aminotransfer 99.9 3.4E-20 7.5E-25 169.3 21.9 221 46-278 155-393 (398)
167 PRK02731 histidinol-phosphate 99.9 8.2E-21 1.8E-25 171.6 17.5 213 46-278 143-365 (367)
168 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 4.9E-20 1.1E-24 165.6 22.0 220 45-277 111-355 (355)
169 PRK03158 histidinol-phosphate 99.9 7.4E-21 1.6E-25 171.4 16.7 209 46-276 140-358 (359)
170 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2E-20 4.3E-25 169.2 19.5 265 4-281 68-369 (370)
171 PRK05664 threonine-phosphate d 99.9 2.7E-20 5.8E-25 165.8 18.7 251 3-278 65-327 (330)
172 TIGR01265 tyr_nico_aTase tyros 99.9 4.9E-20 1.1E-24 168.5 20.6 264 3-278 97-400 (403)
173 TIGR02326 transamin_PhnW 2-ami 99.9 1.1E-19 2.5E-24 163.9 22.3 220 46-278 116-361 (363)
174 PRK05839 hypothetical protein; 99.9 3.3E-20 7.1E-25 168.0 18.5 253 3-278 84-373 (374)
175 TIGR01140 L_thr_O3P_dcar L-thr 99.9 3.9E-20 8.4E-25 164.7 18.7 211 41-273 110-329 (330)
176 COG0520 csdA Selenocysteine ly 99.9 1E-19 2.2E-24 164.6 21.0 213 46-278 151-404 (405)
177 PRK07590 L,L-diaminopimelate a 99.9 1.7E-20 3.6E-25 171.9 16.2 207 59-277 175-409 (409)
178 PRK14807 histidinol-phosphate 99.9 5.6E-20 1.2E-24 165.1 19.2 251 3-277 77-350 (351)
179 PRK09275 aspartate aminotransf 99.9 1.7E-20 3.7E-25 173.9 16.0 269 4-283 163-520 (527)
180 PRK06836 aspartate aminotransf 99.9 7.9E-20 1.7E-24 166.6 20.1 217 46-282 157-393 (394)
181 PRK09265 aminotransferase AlaT 99.8 9E-20 2E-24 166.8 20.4 223 46-281 157-402 (404)
182 PRK10874 cysteine sulfinate de 99.8 2.2E-19 4.7E-24 164.2 22.9 211 46-278 149-397 (401)
183 PRK08637 hypothetical protein; 99.8 1.3E-19 2.8E-24 165.0 21.0 267 4-281 71-387 (388)
184 cd00609 AAT_like Aspartate ami 99.8 8.7E-20 1.9E-24 163.3 19.6 205 59-274 131-349 (350)
185 PLN03026 histidinol-phosphate 99.8 3E-20 6.5E-25 168.5 16.6 210 46-276 163-379 (380)
186 PRK03321 putative aminotransfe 99.8 1.5E-20 3.2E-25 169.0 14.1 207 46-278 134-350 (352)
187 PRK14809 histidinol-phosphate 99.8 3.7E-20 8E-25 166.7 16.6 250 3-278 83-356 (357)
188 PRK09440 avtA valine--pyruvate 99.8 9.9E-20 2.1E-24 167.3 19.7 223 46-282 170-413 (416)
189 PLN02231 alanine transaminase 99.8 5.2E-20 1.1E-24 172.5 17.9 270 3-282 192-529 (534)
190 COG0079 HisC Histidinol-phosph 99.8 1.1E-19 2.3E-24 161.9 18.6 211 45-278 133-353 (356)
191 PRK06358 threonine-phosphate d 99.8 8.7E-20 1.9E-24 164.0 17.9 251 3-277 72-353 (354)
192 TIGR01141 hisC histidinol-phos 99.8 3.2E-20 6.9E-25 166.5 14.8 209 45-274 130-346 (346)
193 PRK04781 histidinol-phosphate 99.8 1.3E-19 2.7E-24 163.5 18.8 213 46-278 140-362 (364)
194 PRK09295 bifunctional cysteine 99.8 2.5E-19 5.4E-24 164.0 20.5 211 46-278 153-403 (406)
195 cd00613 GDC-P Glycine cleavage 99.8 2.9E-19 6.4E-24 163.2 20.7 244 4-273 109-398 (398)
196 TIGR03801 asp_4_decarbox aspar 99.8 6.3E-20 1.4E-24 169.9 16.4 268 4-282 157-518 (521)
197 cd06454 KBL_like KBL_like; thi 99.8 2.3E-19 5E-24 161.0 19.5 222 40-276 110-348 (349)
198 PRK00950 histidinol-phosphate 99.8 9.7E-20 2.1E-24 164.2 17.1 207 46-278 147-361 (361)
199 PRK09257 aromatic amino acid a 99.8 1.5E-19 3.2E-24 165.0 17.9 258 5-277 97-396 (396)
200 PLN02397 aspartate transaminas 99.8 2.4E-19 5.1E-24 164.7 19.2 217 46-278 180-420 (423)
201 PRK04870 histidinol-phosphate 99.8 8.5E-20 1.8E-24 164.3 15.3 250 4-277 83-356 (356)
202 PRK06959 putative threonine-ph 99.8 2.4E-19 5.2E-24 160.1 17.8 202 61-282 131-335 (339)
203 TIGR03542 DAPAT_plant LL-diami 99.8 1.6E-19 3.5E-24 165.0 16.8 207 59-277 172-402 (402)
204 PLN02855 Bifunctional selenocy 99.8 3.6E-19 7.7E-24 163.9 18.8 215 46-283 162-421 (424)
205 PRK05387 histidinol-phosphate 99.8 1.4E-19 3E-24 162.8 15.7 252 3-278 78-352 (353)
206 TIGR03576 pyridox_MJ0158 pyrid 99.8 3.4E-19 7.5E-24 159.0 18.1 251 3-277 72-345 (346)
207 KOG0256 1-aminocyclopropane-1- 99.8 2.1E-18 4.6E-23 149.1 22.1 268 3-278 147-460 (471)
208 PRK09105 putative aminotransfe 99.8 1.8E-19 3.8E-24 162.8 16.1 249 4-278 97-369 (370)
209 cd06451 AGAT_like Alanine-glyo 99.8 8.5E-19 1.8E-23 157.8 20.3 218 45-278 111-356 (356)
210 PLN02409 serine--glyoxylate am 99.8 1.2E-18 2.7E-23 159.0 21.6 222 46-282 122-374 (401)
211 PRK13479 2-aminoethylphosphona 99.8 1.9E-18 4.2E-23 156.2 22.6 223 45-281 117-364 (368)
212 PRK05166 histidinol-phosphate 99.8 2.6E-19 5.6E-24 162.0 16.2 253 4-278 90-370 (371)
213 PLN02672 methionine S-methyltr 99.8 4.9E-19 1.1E-23 174.0 18.7 263 4-278 756-1079(1082)
214 COG1104 NifS Cysteine sulfinat 99.8 9.9E-19 2.2E-23 153.3 18.7 257 3-283 62-380 (386)
215 TIGR01814 kynureninase kynuren 99.8 2.1E-18 4.6E-23 157.8 21.8 217 46-277 157-405 (406)
216 PRK01688 histidinol-phosphate 99.8 1.5E-19 3.3E-24 162.2 13.9 206 46-273 135-350 (351)
217 TIGR01979 sufS cysteine desulf 99.8 2.9E-18 6.3E-23 156.9 22.5 213 46-281 148-402 (403)
218 PRK08056 threonine-phosphate d 99.8 1.1E-18 2.4E-23 157.0 19.3 210 49-278 134-354 (356)
219 cd06453 SufS_like Cysteine des 99.8 1.5E-18 3.2E-23 157.3 20.0 208 46-273 128-373 (373)
220 KOG0634 Aromatic amino acid am 99.8 9.6E-18 2.1E-22 146.1 22.8 273 4-281 126-467 (472)
221 TIGR01976 am_tr_V_VC1184 cyste 99.8 5.6E-18 1.2E-22 154.7 22.6 205 46-273 145-397 (397)
222 PRK08354 putative aminotransfe 99.8 2.7E-18 5.9E-23 151.6 19.4 238 4-276 56-309 (311)
223 KOG1359 Glycine C-acetyltransf 99.8 4.5E-18 9.8E-23 141.2 18.4 259 4-278 129-411 (417)
224 PLN02721 threonine aldolase 99.8 4.6E-18 9.9E-23 152.8 20.1 222 46-278 119-351 (353)
225 PRK07392 threonine-phosphate d 99.8 2.7E-18 5.8E-23 154.8 17.6 253 3-278 75-358 (360)
226 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 8.8E-18 1.9E-22 152.8 20.5 224 45-281 139-382 (387)
227 TIGR03402 FeS_nifS cysteine de 99.8 1.4E-17 2.9E-22 151.3 21.4 215 45-283 124-375 (379)
228 PRK14808 histidinol-phosphate 99.8 1.8E-18 3.8E-23 154.3 14.7 193 60-275 138-333 (335)
229 PRK04635 histidinol-phosphate 99.8 2.6E-18 5.7E-23 154.5 15.2 248 4-276 79-352 (354)
230 COG0075 Serine-pyruvate aminot 99.8 4.9E-17 1.1E-21 143.6 22.3 261 2-283 80-366 (383)
231 KOG0259 Tyrosine aminotransfer 99.8 1.9E-17 4.1E-22 142.1 17.6 263 3-278 127-432 (447)
232 PRK02948 cysteine desulfurase; 99.8 4.4E-17 9.4E-22 148.1 19.9 218 45-283 126-377 (381)
233 PF00266 Aminotran_5: Aminotra 99.8 2.2E-17 4.8E-22 149.5 16.9 202 46-269 128-371 (371)
234 PRK13520 L-tyrosine decarboxyl 99.8 1.2E-16 2.5E-21 144.7 21.6 212 46-278 140-370 (371)
235 cd06502 TA_like Low-specificit 99.8 2.1E-17 4.5E-22 147.6 16.1 216 45-275 108-337 (338)
236 TIGR03403 nifS_epsilon cystein 99.8 1.4E-16 3E-21 144.8 20.8 213 46-283 129-378 (382)
237 PRK03967 histidinol-phosphate 99.8 3.7E-17 8.1E-22 146.0 16.3 200 46-281 130-335 (337)
238 PRK13238 tnaA tryptophanase/L- 99.7 2E-16 4.3E-21 146.0 19.9 233 45-285 161-438 (460)
239 cd00378 SHMT Serine-glycine hy 99.7 1.8E-16 3.8E-21 145.1 18.5 216 46-278 149-384 (402)
240 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 2.1E-16 4.5E-21 142.6 18.7 219 46-277 121-360 (361)
241 TIGR01977 am_tr_V_EF2568 cyste 99.7 4.6E-16 9.9E-21 141.1 21.0 210 45-275 125-375 (376)
242 PLN02368 alanine transaminase 99.7 1.9E-17 4.2E-22 150.7 11.7 214 3-223 131-396 (407)
243 KOG1357 Serine palmitoyltransf 99.7 8.6E-17 1.9E-21 140.7 15.0 222 39-278 245-501 (519)
244 PRK07908 hypothetical protein; 99.7 3.8E-16 8.3E-21 140.2 18.8 197 59-278 138-346 (349)
245 PRK10534 L-threonine aldolase; 99.7 1.9E-16 4.1E-21 141.3 16.0 211 46-278 112-332 (333)
246 TIGR03812 tyr_de_CO2_Arch tyro 99.7 1.4E-15 3E-20 137.7 20.8 212 45-275 141-372 (373)
247 PRK13580 serine hydroxymethylt 99.7 3E-15 6.5E-20 136.6 22.7 216 46-281 208-446 (493)
248 PLN02242 methionine gamma-lyas 99.7 2.2E-16 4.7E-21 144.3 13.1 256 3-278 92-414 (418)
249 PRK13034 serine hydroxymethylt 99.7 6.4E-15 1.4E-19 135.0 22.7 217 45-281 155-393 (416)
250 cd00614 CGS_like CGS_like: Cys 99.7 3.7E-16 8E-21 141.2 14.3 217 39-277 107-368 (369)
251 KOG1368 Threonine aldolase [Am 99.7 2.8E-16 6.1E-21 130.8 12.3 222 46-278 135-367 (384)
252 PLN02651 cysteine desulfurase 99.7 1.6E-15 3.5E-20 137.0 17.1 201 46-267 127-364 (364)
253 PRK06460 hypothetical protein; 99.7 1.5E-15 3.3E-20 137.2 15.7 219 40-278 113-373 (376)
254 PRK06767 methionine gamma-lyas 99.7 9.1E-16 2E-20 139.3 14.3 216 41-278 130-384 (386)
255 TIGR02006 IscS cysteine desulf 99.7 7.4E-15 1.6E-19 134.4 20.4 212 46-282 131-379 (402)
256 COG3977 Alanine-alpha-ketoisov 99.7 4.9E-15 1.1E-19 123.6 17.0 220 46-278 170-410 (417)
257 cd06450 DOPA_deC_like DOPA dec 99.7 4.8E-15 1E-19 132.8 17.5 200 45-275 130-344 (345)
258 PRK07049 methionine gamma-lyas 99.7 2.4E-15 5.1E-20 137.9 15.3 258 4-278 100-425 (427)
259 PRK08247 cystathionine gamma-s 99.7 3E-15 6.6E-20 135.0 15.6 213 40-278 119-363 (366)
260 PRK00011 glyA serine hydroxyme 99.6 4.8E-14 1E-18 129.6 22.5 216 45-278 152-388 (416)
261 PRK00451 glycine dehydrogenase 99.6 3.1E-14 6.8E-19 132.0 21.4 207 46-277 193-446 (447)
262 PRK06234 methionine gamma-lyas 99.6 5.5E-15 1.2E-19 134.7 15.7 219 40-278 132-396 (400)
263 cd00617 Tnase_like Tryptophana 99.6 8.6E-15 1.9E-19 133.5 16.7 232 46-287 137-415 (431)
264 PRK08249 cystathionine gamma-s 99.6 5.6E-15 1.2E-19 134.3 15.4 222 40-282 132-395 (398)
265 PTZ00094 serine hydroxymethylt 99.6 1.4E-14 3.1E-19 134.1 18.3 216 46-281 170-409 (452)
266 PRK08133 O-succinylhomoserine 99.6 3.7E-15 8E-20 135.4 13.5 220 39-278 128-389 (390)
267 TIGR01325 O_suc_HS_sulf O-succ 99.6 4.3E-15 9.2E-20 134.7 13.8 216 39-277 121-380 (380)
268 TIGR01437 selA_rel uncharacter 99.6 3E-14 6.5E-19 128.4 18.8 211 45-276 136-362 (363)
269 PRK04366 glycine dehydrogenase 99.6 1.4E-13 3E-18 128.3 23.2 222 45-284 196-452 (481)
270 COG3844 Kynureninase [Amino ac 99.6 1.1E-13 2.3E-18 117.0 20.1 216 46-281 155-403 (407)
271 PRK07504 O-succinylhomoserine 99.6 6.3E-15 1.4E-19 134.2 13.6 219 40-278 133-394 (398)
272 PRK07810 O-succinylhomoserine 99.6 1.4E-14 3E-19 132.0 15.3 221 39-277 137-402 (403)
273 PLN02414 glycine dehydrogenase 99.6 1.8E-13 3.9E-18 134.8 23.6 254 3-283 616-910 (993)
274 TIGR01366 serC_3 phosphoserine 99.6 1.5E-14 3.2E-19 130.2 14.6 203 59-281 127-361 (361)
275 PRK08045 cystathionine gamma-s 99.6 2.4E-14 5.2E-19 129.7 15.9 220 42-282 122-384 (386)
276 PRK08776 cystathionine gamma-s 99.6 3.9E-14 8.5E-19 129.1 15.2 182 40-239 128-327 (405)
277 TIGR01324 cysta_beta_ly_B cyst 99.6 3.4E-14 7.3E-19 128.3 14.6 214 44-278 122-375 (377)
278 TIGR02080 O_succ_thio_ly O-suc 99.6 3E-14 6.4E-19 129.0 14.1 216 43-278 122-380 (382)
279 PRK05968 hypothetical protein; 99.6 4.9E-14 1.1E-18 128.0 15.5 215 40-278 131-385 (389)
280 PRK07811 cystathionine gamma-s 99.6 9.3E-14 2E-18 126.2 16.6 220 40-278 129-387 (388)
281 PRK14012 cysteine desulfurase; 99.6 3.5E-13 7.6E-18 123.4 20.5 213 46-283 133-382 (404)
282 KOG2862 Alanine-glyoxylate ami 99.6 3.5E-13 7.7E-18 113.2 18.4 220 46-278 130-381 (385)
283 PRK03080 phosphoserine aminotr 99.6 9.4E-14 2E-18 125.9 16.3 205 61-282 137-375 (378)
284 PRK07503 methionine gamma-lyas 99.6 1.8E-13 3.9E-18 124.8 17.9 145 40-200 133-283 (403)
285 TIGR01328 met_gam_lyase methio 99.6 6.9E-14 1.5E-18 127.1 15.0 219 39-278 126-389 (391)
286 PRK07050 cystathionine beta-ly 99.6 1.2E-13 2.6E-18 125.5 16.0 220 40-278 133-390 (394)
287 PRK09028 cystathionine beta-ly 99.6 1E-13 2.3E-18 125.3 15.2 217 41-278 130-386 (394)
288 PRK08861 cystathionine gamma-s 99.6 5.1E-14 1.1E-18 127.3 12.9 219 40-282 121-385 (388)
289 cd00616 AHBA_syn 3-amino-5-hyd 99.5 3.8E-13 8.2E-18 120.8 18.1 208 45-274 94-352 (352)
290 TIGR01329 cysta_beta_ly_E cyst 99.5 1.1E-13 2.4E-18 125.3 14.2 219 39-278 113-374 (378)
291 PRK07269 cystathionine gamma-s 99.5 1.7E-13 3.6E-18 123.3 15.1 208 45-278 124-363 (364)
292 TIGR02379 ECA_wecE TDP-4-keto- 99.5 7.2E-13 1.6E-17 119.8 19.2 211 46-277 108-375 (376)
293 PRK08064 cystathionine beta-ly 99.5 1.5E-13 3.3E-18 124.9 14.9 217 39-275 120-382 (390)
294 PLN03226 serine hydroxymethylt 99.5 1.4E-12 3E-17 120.9 21.4 216 46-281 171-420 (475)
295 PRK07582 cystathionine gamma-l 99.5 3.5E-13 7.6E-18 121.5 16.6 198 59-273 131-363 (366)
296 COG2873 MET17 O-acetylhomoseri 99.5 7.8E-13 1.7E-17 113.9 16.5 94 37-144 127-223 (426)
297 PRK08574 cystathionine gamma-s 99.5 1.5E-13 3.3E-18 124.5 13.0 215 45-278 124-383 (385)
298 PRK06084 O-acetylhomoserine am 99.5 5E-13 1.1E-17 122.5 16.5 245 3-278 98-421 (425)
299 KOG0633 Histidinol phosphate a 99.5 5.4E-13 1.2E-17 109.5 14.4 215 46-276 147-374 (375)
300 PRK05967 cystathionine beta-ly 99.5 3.7E-13 8E-18 121.6 14.2 219 40-278 132-390 (395)
301 COG2008 GLY1 Threonine aldolas 99.5 1.1E-12 2.5E-17 113.1 16.5 221 46-277 113-341 (342)
302 PRK05939 hypothetical protein; 99.5 2.6E-13 5.6E-18 123.4 13.0 94 39-144 113-207 (397)
303 PRK05355 3-phosphoserine/phosp 99.5 6.6E-13 1.4E-17 119.4 15.4 206 49-278 132-357 (360)
304 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 2.3E-13 4.9E-18 122.6 12.4 240 3-278 95-386 (386)
305 PRK07671 cystathionine beta-ly 99.5 3.2E-13 7E-18 122.1 13.3 217 40-277 117-376 (377)
306 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2.1E-13 4.6E-18 125.0 11.7 93 39-145 124-219 (418)
307 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.5 2.4E-12 5.1E-17 116.7 18.1 212 45-277 107-374 (375)
308 PLN02509 cystathionine beta-ly 99.5 4.7E-13 1E-17 123.2 13.4 216 40-278 200-460 (464)
309 PRK08114 cystathionine beta-ly 99.5 4.1E-13 8.9E-18 121.2 12.5 221 38-278 128-392 (395)
310 PRK08248 O-acetylhomoserine am 99.5 6.7E-13 1.4E-17 121.8 13.1 218 39-278 131-426 (431)
311 PRK02769 histidine decarboxyla 99.5 2.2E-11 4.8E-16 110.0 22.5 213 46-283 146-375 (380)
312 PRK06176 cystathionine gamma-s 99.5 7.2E-13 1.6E-17 119.9 12.9 217 40-278 117-377 (380)
313 PRK05367 glycine dehydrogenase 99.5 1.1E-11 2.4E-16 122.8 21.7 223 46-283 626-878 (954)
314 TIGR03235 DNA_S_dndA cysteine 99.5 5.3E-13 1.2E-17 120.0 11.3 182 45-248 126-321 (353)
315 TIGR01364 serC_1 phosphoserine 99.5 3.2E-12 6.8E-17 114.4 16.1 200 59-278 129-347 (349)
316 TIGR03531 selenium_SpcS O-phos 99.4 1.2E-11 2.5E-16 113.0 19.3 223 46-277 190-444 (444)
317 PLN02724 Molybdenum cofactor s 99.4 6.5E-11 1.4E-15 116.8 24.3 210 59-278 191-487 (805)
318 PRK12566 glycine dehydrogenase 99.4 4.9E-11 1.1E-15 116.0 22.8 222 46-283 627-879 (954)
319 KOG1358 Serine palmitoyltransf 99.4 4E-12 8.7E-17 109.9 13.7 227 38-278 201-464 (467)
320 TIGR01788 Glu-decarb-GAD gluta 99.4 8.1E-11 1.8E-15 107.8 22.2 221 46-281 175-430 (431)
321 PRK05994 O-acetylhomoserine am 99.4 7.1E-12 1.5E-16 115.1 14.9 217 40-278 131-425 (427)
322 PRK06702 O-acetylhomoserine am 99.4 4.2E-12 9.1E-17 115.9 13.1 218 39-278 128-423 (432)
323 PRK07812 O-acetylhomoserine am 99.4 5.6E-12 1.2E-16 115.7 13.7 216 44-282 142-433 (436)
324 PRK11658 UDP-4-amino-4-deoxy-L 99.4 2.6E-11 5.5E-16 110.1 17.3 215 46-278 110-378 (379)
325 TIGR00461 gcvP glycine dehydro 99.4 1.6E-10 3.4E-15 113.1 23.5 254 3-283 578-870 (939)
326 COG0626 MetC Cystathionine bet 99.4 1.5E-11 3.2E-16 109.8 14.4 247 2-278 102-393 (396)
327 cd00611 PSAT_like Phosphoserin 99.4 3.1E-11 6.6E-16 108.6 16.6 198 59-276 137-353 (355)
328 KOG0053 Cystathionine beta-lya 99.3 2.2E-11 4.7E-16 107.7 13.8 216 40-278 145-405 (409)
329 KOG1549 Cysteine desulfurase N 99.3 8.4E-11 1.8E-15 104.2 16.8 217 46-282 170-420 (428)
330 PRK08134 O-acetylhomoserine am 99.3 2.1E-11 4.5E-16 112.0 13.2 90 39-142 131-223 (433)
331 TIGR03588 PseC UDP-4-keto-6-de 99.3 1.9E-10 4.2E-15 104.5 19.4 216 45-277 105-380 (380)
332 PF12897 Aminotran_MocR: Alani 99.3 2.3E-10 5E-15 99.7 17.5 222 45-277 158-413 (425)
333 PLN02880 tyrosine decarboxylas 99.3 1.5E-10 3.3E-15 107.8 16.4 227 46-282 222-486 (490)
334 PRK05613 O-acetylhomoserine am 99.3 5.4E-11 1.2E-15 109.2 12.6 212 45-278 143-435 (437)
335 cd00615 Orn_deC_like Ornithine 99.3 3.5E-11 7.6E-16 105.5 10.1 145 45-198 140-293 (294)
336 COG0399 WecE Predicted pyridox 99.3 5.3E-10 1.1E-14 99.4 17.5 212 46-278 111-372 (374)
337 PRK15407 lipopolysaccharide bi 99.2 7.6E-10 1.6E-14 102.0 18.8 213 46-278 148-435 (438)
338 PLN03032 serine decarboxylase; 99.2 4.8E-09 1E-13 94.3 21.8 205 46-275 147-372 (374)
339 COG1103 Archaea-specific pyrid 99.2 4.2E-09 9.2E-14 87.4 19.3 216 48-281 144-381 (382)
340 PLN02590 probable tyrosine dec 99.2 7.8E-09 1.7E-13 96.8 23.4 230 46-285 270-537 (539)
341 PRK04311 selenocysteine syntha 99.2 3.7E-09 8.1E-14 97.6 20.9 219 45-278 204-463 (464)
342 KOG3846 L-kynurenine hydrolase 99.2 1.9E-09 4.2E-14 90.9 17.0 262 2-281 155-462 (465)
343 PLN02271 serine hydroxymethylt 99.2 6.5E-09 1.4E-13 96.2 21.3 214 46-278 286-539 (586)
344 TIGR00474 selA seryl-tRNA(sec) 99.1 1.1E-08 2.4E-13 94.2 20.9 214 45-273 199-453 (454)
345 PRK13237 tyrosine phenol-lyase 99.1 7.5E-09 1.6E-13 94.1 19.4 234 46-287 162-440 (460)
346 PF01041 DegT_DnrJ_EryC1: DegT 99.1 9.5E-09 2.1E-13 92.8 19.6 209 46-274 102-363 (363)
347 PRK06434 cystathionine gamma-l 99.1 9.8E-10 2.1E-14 99.3 12.3 214 40-278 132-383 (384)
348 TIGR03799 NOD_PanD_pyr putativ 99.1 2.2E-08 4.7E-13 93.9 21.2 217 46-272 248-518 (522)
349 PRK15029 arginine decarboxylas 99.1 1.3E-08 2.9E-13 98.2 19.0 267 5-278 247-603 (755)
350 TIGR02618 tyr_phenol_ly tyrosi 99.1 1.1E-08 2.5E-13 92.7 17.1 233 46-287 155-433 (450)
351 PLN02452 phosphoserine transam 99.0 8.7E-09 1.9E-13 92.6 16.0 199 59-278 144-362 (365)
352 TIGR01365 serC_2 phosphoserine 99.0 8.2E-09 1.8E-13 92.8 15.3 199 64-278 131-372 (374)
353 PLN02263 serine decarboxylase 99.0 1.3E-07 2.8E-12 86.8 23.1 208 46-278 214-442 (470)
354 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 4.4E-09 9.6E-14 94.8 12.9 252 4-264 107-416 (417)
355 cd01494 AAT_I Aspartate aminot 99.0 3.4E-09 7.3E-14 84.5 10.1 78 59-144 91-170 (170)
356 PF00464 SHMT: Serine hydroxym 99.0 1.4E-08 2.9E-13 91.3 13.3 207 46-271 157-397 (399)
357 COG0112 GlyA Glycine/serine hy 98.9 3.4E-07 7.4E-12 80.3 21.1 213 46-278 154-389 (413)
358 TIGR02617 tnaA_trp_ase tryptop 98.9 1.6E-07 3.5E-12 84.6 18.8 232 46-287 168-448 (467)
359 COG1448 TyrB Aspartate/tyrosin 98.9 2.4E-08 5.2E-13 87.1 13.1 216 46-276 158-395 (396)
360 PLN02414 glycine dehydrogenase 98.9 1.5E-07 3.2E-12 93.6 19.7 193 60-274 234-464 (993)
361 COG1003 GcvP Glycine cleavage 98.9 6.8E-07 1.5E-11 79.2 20.6 251 2-285 156-452 (496)
362 PRK05367 glycine dehydrogenase 98.9 1.8E-07 4E-12 93.2 18.6 195 59-274 205-437 (954)
363 PRK15399 lysine decarboxylase 98.8 8.5E-07 1.8E-11 85.1 20.7 223 46-278 281-558 (713)
364 PRK15400 lysine decarboxylase 98.8 4.7E-07 1E-11 86.9 18.1 266 4-278 236-558 (714)
365 PF05889 SLA_LP_auto_ag: Solub 98.8 2.1E-07 4.5E-12 82.3 13.8 225 46-278 140-389 (389)
366 PRK12462 phosphoserine aminotr 98.7 9.3E-07 2E-11 79.0 17.1 200 59-278 142-361 (364)
367 COG3033 TnaA Tryptophanase [Am 98.7 8.2E-06 1.8E-10 70.8 21.4 232 46-286 170-450 (471)
368 PRK13578 ornithine decarboxyla 98.7 3.2E-06 7E-11 81.3 20.4 226 46-278 261-564 (720)
369 KOG0258 Alanine aminotransfera 98.6 2.1E-06 4.7E-11 75.0 14.3 219 46-278 199-468 (475)
370 COG0076 GadB Glutamate decarbo 98.6 2.3E-06 5E-11 79.1 15.4 187 46-246 194-401 (460)
371 COG0403 GcvP Glycine cleavage 98.5 4.3E-05 9.3E-10 67.9 19.8 218 37-277 190-448 (450)
372 TIGR00461 gcvP glycine dehydro 98.4 2E-05 4.3E-10 78.0 17.3 204 46-274 185-426 (939)
373 PF01212 Beta_elim_lyase: Beta 98.4 1.2E-06 2.7E-11 76.2 7.6 101 46-151 107-215 (290)
374 COG1921 SelA Selenocysteine sy 98.3 1.1E-05 2.5E-10 71.5 11.8 124 45-179 144-271 (395)
375 KOG1412 Aspartate aminotransfe 98.3 2.8E-05 6E-10 66.3 13.1 217 46-282 164-407 (410)
376 PF02347 GDC-P: Glycine cleava 98.2 6E-05 1.3E-09 68.5 15.8 196 59-273 196-429 (429)
377 COG1982 LdcC Arginine/lysine/o 98.2 0.00014 3.1E-09 67.6 18.1 218 46-274 152-403 (557)
378 KOG0629 Glutamate decarboxylas 98.2 2.5E-05 5.3E-10 69.3 11.8 226 46-278 236-508 (510)
379 PF04864 Alliinase_C: Allinase 98.2 1.1E-05 2.4E-10 69.9 8.8 197 60-275 137-361 (363)
380 PF00282 Pyridoxal_deC: Pyrido 98.1 9.8E-05 2.1E-09 66.8 14.1 150 46-200 177-354 (373)
381 PF03841 SelA: L-seryl-tRNA se 98.1 6E-06 1.3E-10 72.7 6.0 127 46-179 125-261 (367)
382 KOG1383 Glutamate decarboxylas 98.0 0.0013 2.9E-08 59.2 19.5 226 46-290 207-456 (491)
383 PF06838 Met_gamma_lyase: Meth 97.9 0.00015 3.2E-09 63.6 10.4 99 46-152 143-246 (403)
384 KOG0628 Aromatic-L-amino-acid/ 97.8 0.0025 5.5E-08 57.4 17.7 223 46-281 218-472 (511)
385 KOG2467 Glycine/serine hydroxy 97.6 0.0023 5.1E-08 56.0 14.1 212 46-278 177-425 (477)
386 KOG2040 Glycine dehydrogenase 97.6 0.0052 1.1E-07 57.8 16.8 215 46-278 666-917 (1001)
387 COG1932 SerC Phosphoserine ami 97.6 0.0057 1.2E-07 53.8 16.0 197 61-278 145-362 (365)
388 KOG3843 Predicted serine hydro 97.5 0.00024 5.3E-09 59.4 6.2 229 46-283 142-405 (432)
389 PRK12566 glycine dehydrogenase 97.4 0.0064 1.4E-07 60.5 15.7 202 48-274 199-439 (954)
390 COG4100 Cystathionine beta-lya 97.1 0.0097 2.1E-07 51.0 11.1 99 46-152 154-257 (416)
391 TIGR03811 tyr_de_CO2_Ent tyros 97.0 0.02 4.4E-07 54.9 13.8 150 46-200 261-475 (608)
392 KOG1411 Aspartate aminotransfe 96.5 0.008 1.7E-07 52.4 6.6 213 46-277 184-423 (427)
393 KOG2040 Glycine dehydrogenase 90.1 14 0.00031 35.7 14.2 195 59-274 246-478 (1001)
394 smart00642 Aamy Alpha-amylase 78.2 8.5 0.00018 30.5 6.3 60 45-104 16-93 (166)
395 PF12138 Spherulin4: Spherulat 75.7 9.3 0.0002 32.7 6.2 52 47-98 18-71 (253)
396 KOG3974 Predicted sugar kinase 74.7 4.7 0.0001 34.2 4.0 48 46-100 91-138 (306)
397 KOG2790 Phosphoserine aminotra 71.1 35 0.00076 29.7 8.3 144 128-278 204-367 (370)
398 cd01840 SGNH_hydrolase_yrhL_li 69.1 15 0.00032 28.3 5.6 48 47-98 66-114 (150)
399 COG0296 GlgB 1,4-alpha-glucan 66.0 8.4 0.00018 37.3 4.2 36 76-111 209-244 (628)
400 COG0352 ThiE Thiamine monophos 65.0 17 0.00037 30.1 5.3 49 47-101 24-72 (211)
401 PRK13601 putative L7Ae-like ri 62.7 31 0.00067 23.8 5.5 47 48-104 14-60 (82)
402 PRK13602 putative ribosomal pr 62.0 39 0.00084 23.2 5.9 48 47-104 16-63 (82)
403 PF03652 UPF0081: Uncharacteri 60.6 48 0.001 25.2 6.8 58 45-104 38-98 (135)
404 PRK06683 hypothetical protein; 56.8 46 0.001 22.9 5.5 49 48-106 17-65 (82)
405 PF13481 AAA_25: AAA domain; P 55.8 23 0.0005 28.3 4.7 51 47-98 129-183 (193)
406 cd01827 sialate_O-acetylestera 54.9 31 0.00068 27.4 5.3 50 49-98 94-152 (188)
407 PRK11633 cell division protein 54.6 88 0.0019 26.3 7.8 51 227-277 159-214 (226)
408 COG1105 FruK Fructose-1-phosph 53.6 41 0.0009 29.6 6.0 54 47-104 116-169 (310)
409 PRK01018 50S ribosomal protein 50.6 65 0.0014 23.0 5.7 42 48-99 22-63 (99)
410 COG1707 ACT domain-containing 49.3 80 0.0017 25.0 6.2 92 3-102 84-176 (218)
411 PF14871 GHL6: Hypothetical gl 46.9 1.1E+02 0.0024 23.1 6.8 20 79-98 42-61 (132)
412 PF07972 Flavodoxin_NdrI: NrdI 43.8 38 0.00082 25.4 3.7 48 47-100 58-107 (122)
413 PF00128 Alpha-amylase: Alpha 41.5 25 0.00054 30.3 2.9 26 79-104 50-75 (316)
414 PRK06427 bifunctional hydroxy- 41.3 78 0.0017 26.9 5.9 51 46-104 57-110 (266)
415 PF02677 DUF208: Uncharacteriz 41.1 1.1E+02 0.0023 24.7 6.0 45 53-104 17-64 (176)
416 TIGR00789 flhB_rel flhB C-term 41.1 26 0.00057 24.2 2.3 24 81-104 27-50 (82)
417 PRK05583 ribosomal protein L7A 40.7 74 0.0016 23.0 4.8 44 47-100 22-65 (104)
418 TIGR02403 trehalose_treC alpha 40.3 85 0.0018 30.2 6.5 60 45-104 24-98 (543)
419 PRK10785 maltodextrin glucosid 39.8 86 0.0019 30.6 6.5 60 45-104 176-249 (598)
420 PF05036 SPOR: Sporulation rel 39.8 57 0.0012 21.2 3.9 47 228-274 15-65 (76)
421 PRK13600 putative ribosomal pr 39.2 1.2E+02 0.0027 21.0 5.4 51 47-107 18-68 (84)
422 PRK07714 hypothetical protein; 39.1 1.2E+02 0.0027 21.6 5.7 44 47-100 23-66 (100)
423 COG0108 RibB 3,4-dihydroxy-2-b 39.0 1.3E+02 0.0028 24.7 6.2 48 47-99 143-190 (203)
424 cd07571 ALP_N-acyl_transferase 38.8 80 0.0017 27.1 5.6 36 64-99 42-77 (270)
425 PF05209 MinC_N: Septum format 38.4 50 0.0011 23.5 3.6 51 40-98 18-76 (99)
426 COG0816 Predicted endonuclease 37.9 1.1E+02 0.0023 23.7 5.4 57 46-104 41-99 (141)
427 PTZ00106 60S ribosomal protein 37.9 1.4E+02 0.003 21.8 5.9 43 48-100 31-73 (108)
428 PRK08883 ribulose-phosphate 3- 37.7 81 0.0018 26.3 5.2 16 40-55 112-127 (220)
429 cd01841 NnaC_like NnaC (CMP-Ne 37.7 75 0.0016 24.8 4.9 19 80-98 116-134 (174)
430 PF01248 Ribosomal_L7Ae: Ribos 37.7 82 0.0018 22.0 4.6 48 47-104 20-68 (95)
431 COG2870 RfaE ADP-heptose synth 37.3 70 0.0015 29.3 4.9 50 46-101 129-178 (467)
432 cd01822 Lysophospholipase_L1_l 36.9 77 0.0017 24.6 4.9 38 60-98 101-139 (177)
433 PF07905 PucR: Purine cataboli 36.6 1.3E+02 0.0028 22.3 5.7 47 46-99 57-104 (123)
434 cd01171 YXKO-related B.subtili 36.6 89 0.0019 26.4 5.5 58 34-102 53-112 (254)
435 PRK07283 hypothetical protein; 36.2 78 0.0017 22.5 4.3 46 47-102 23-68 (98)
436 PRK10927 essential cell divisi 35.5 2.2E+02 0.0047 25.2 7.4 49 228-276 258-307 (319)
437 PLN03244 alpha-amylase; Provis 35.3 57 0.0012 32.7 4.4 32 77-108 437-468 (872)
438 PRK05339 PEP synthetase regula 35.2 91 0.002 26.9 5.1 84 2-98 3-87 (269)
439 cd00984 DnaB_C DnaB helicase C 34.6 95 0.0021 25.8 5.3 54 46-99 107-168 (242)
440 PRK11468 dihydroxyacetone kina 34.3 1.7E+02 0.0038 26.3 6.9 59 40-104 76-138 (356)
441 PRK14481 dihydroxyacetone kina 34.0 1.8E+02 0.0039 26.0 6.9 59 40-104 76-138 (331)
442 COG1533 SplB DNA repair photol 33.6 1.4E+02 0.0031 26.2 6.2 85 8-98 36-120 (297)
443 cd01831 Endoglucanase_E_like E 33.4 1.4E+02 0.0031 23.2 5.9 36 57-94 93-128 (169)
444 cd01828 sialate_O-acetylestera 33.4 1.1E+02 0.0025 23.6 5.3 40 59-98 86-128 (169)
445 PF05368 NmrA: NmrA-like famil 32.9 1E+02 0.0022 25.4 5.2 53 39-99 47-99 (233)
446 cd07576 R-amidase_like Pseudom 32.9 89 0.0019 26.2 4.9 21 80-100 61-81 (254)
447 TIGR00250 RNAse_H_YqgF RNAse H 32.8 1.2E+02 0.0026 22.9 5.0 58 45-104 35-94 (130)
448 PF04002 RadC: RadC-like JAB d 32.8 1.2E+02 0.0026 22.6 5.0 47 48-98 55-104 (123)
449 cd01834 SGNH_hydrolase_like_2 32.4 1.1E+02 0.0023 24.1 5.1 50 49-98 90-151 (191)
450 TIGR03677 rpl7ae 50S ribosomal 32.3 1.4E+02 0.0031 22.0 5.3 49 47-104 31-79 (117)
451 cd04915 ACT_AK-Ectoine_2 ACT d 32.2 1.2E+02 0.0026 19.6 4.4 46 230-277 17-64 (66)
452 TIGR00506 ribB 3,4-dihydroxy-2 32.2 2.3E+02 0.0049 23.3 6.8 48 47-99 144-191 (199)
453 COG0616 SppA Periplasmic serin 32.1 48 0.001 29.4 3.2 58 46-104 81-140 (317)
454 PRK08091 ribulose-phosphate 3- 32.0 1.8E+02 0.0038 24.5 6.3 62 36-101 120-186 (228)
455 TIGR02363 dhaK1 dihydroxyaceto 31.6 2E+02 0.0043 25.7 6.8 59 40-104 77-139 (329)
456 PRK04175 rpl7ae 50S ribosomal 31.6 1.4E+02 0.0031 22.2 5.2 49 47-104 35-83 (122)
457 cd01123 Rad51_DMC1_radA Rad51_ 31.6 88 0.0019 25.9 4.6 41 60-100 115-166 (235)
458 cd01393 recA_like RecA is a b 31.5 1.5E+02 0.0032 24.4 5.9 60 40-99 89-164 (226)
459 cd07378 MPP_ACP5 Homo sapiens 31.4 1.9E+02 0.0041 24.6 6.8 52 47-98 154-205 (277)
460 TIGR02362 dhaK1b probable dihy 31.3 1.9E+02 0.0041 25.8 6.6 59 40-104 73-135 (326)
461 cd04920 ACT_AKiii-DAPDC_2 ACT 31.2 90 0.0019 19.9 3.6 46 230-277 16-61 (63)
462 PF13401 AAA_22: AAA domain; P 31.2 58 0.0013 23.9 3.1 26 79-104 72-98 (131)
463 PF00926 DHBP_synthase: 3,4-di 31.1 1.5E+02 0.0033 24.2 5.6 48 47-99 139-186 (194)
464 PRK09722 allulose-6-phosphate 31.1 1.4E+02 0.0031 25.1 5.6 61 37-101 111-176 (229)
465 TIGR02402 trehalose_TreZ malto 31.0 61 0.0013 31.2 3.8 63 45-107 108-186 (542)
466 cd01422 MGS Methylglyoxal synt 31.0 2E+02 0.0044 21.0 5.9 46 48-99 60-106 (115)
467 cd01121 Sms Sms (bacterial rad 31.0 88 0.0019 28.5 4.7 58 40-99 140-205 (372)
468 PF01408 GFO_IDH_MocA: Oxidore 30.9 1.2E+02 0.0027 21.8 4.8 31 63-99 88-118 (120)
469 cd01455 vWA_F11C1-5a_type Von 30.7 1.6E+02 0.0035 24.0 5.7 35 60-98 112-146 (191)
470 cd01825 SGNH_hydrolase_peri1 S 30.6 1.9E+02 0.0042 22.6 6.3 40 59-98 95-141 (189)
471 cd01821 Rhamnogalacturan_acety 30.5 1.4E+02 0.003 23.9 5.5 39 60-98 107-150 (198)
472 PRK03512 thiamine-phosphate py 30.4 74 0.0016 26.3 3.8 51 47-103 22-72 (211)
473 PF05913 DUF871: Bacterial pro 30.4 91 0.002 28.2 4.6 58 46-104 12-70 (357)
474 PRK14057 epimerase; Provisiona 30.3 1.8E+02 0.0038 25.0 6.1 61 37-101 135-200 (254)
475 PRK08057 cobalt-precorrin-6x r 30.1 95 0.0021 26.4 4.5 88 1-98 1-96 (248)
476 PRK14483 DhaKLM operon coactiv 30.1 2.1E+02 0.0046 25.5 6.7 59 40-104 75-137 (329)
477 cd03767 SR_Res_par Serine reco 30.0 1.6E+02 0.0035 22.5 5.5 48 49-100 20-67 (146)
478 smart00545 JmjN Small domain f 30.0 72 0.0016 18.9 2.6 22 78-99 14-35 (42)
479 PF13407 Peripla_BP_4: Peripla 29.9 1.2E+02 0.0026 25.2 5.2 40 48-99 46-85 (257)
480 PRK13396 3-deoxy-7-phosphohept 29.8 1.5E+02 0.0032 26.8 5.7 55 46-104 220-281 (352)
481 PF04914 DltD_C: DltD C-termin 29.8 39 0.00084 25.7 1.9 57 45-103 36-97 (130)
482 PRK09441 cytoplasmic alpha-amy 29.5 58 0.0013 30.7 3.4 26 79-104 79-104 (479)
483 TIGR03849 arch_ComA phosphosul 29.2 1.8E+02 0.0038 24.7 5.8 54 46-103 10-63 (237)
484 cd01839 SGNH_arylesterase_like 29.0 96 0.0021 25.1 4.3 19 80-98 155-173 (208)
485 cd07578 nitrilase_1_R1 First n 28.6 1.1E+02 0.0024 25.8 4.8 19 81-99 65-83 (258)
486 cd07581 nitrilase_3 Uncharacte 28.5 95 0.0021 26.1 4.3 19 81-99 61-79 (255)
487 PF13472 Lipase_GDSL_2: GDSL-l 28.5 1.2E+02 0.0027 23.0 4.8 19 80-98 129-147 (179)
488 PF13872 AAA_34: P-loop contai 27.9 43 0.00094 29.4 2.1 25 80-104 158-183 (303)
489 PRK00109 Holliday junction res 27.7 1.7E+02 0.0036 22.4 5.1 57 46-104 42-100 (138)
490 PRK05601 DNA polymerase III su 27.7 1.2E+02 0.0026 27.5 4.8 48 46-104 309-364 (377)
491 PF07085 DRTGG: DRTGG domain; 27.5 98 0.0021 22.1 3.7 48 40-100 44-91 (105)
492 COG1377 FlhB Flagellar biosynt 27.3 1.2E+02 0.0026 27.4 4.7 46 59-104 261-319 (363)
493 PRK07106 5-aminoimidazole-4-ca 27.3 1.7E+02 0.0037 26.7 5.6 45 40-99 338-382 (390)
494 PF10750 DUF2536: Protein of u 27.2 53 0.0011 21.5 1.8 21 37-57 10-30 (68)
495 COG1088 RfbB dTDP-D-glucose 4, 27.2 2.4E+02 0.0052 25.0 6.3 89 40-131 56-158 (340)
496 PF07131 DUF1382: Protein of u 27.1 1.1E+02 0.0024 19.5 3.2 38 231-278 12-49 (61)
497 COG2257 Uncharacterized homolo 27.0 44 0.00096 23.4 1.6 25 81-105 32-56 (92)
498 cd04847 Peptidases_S8_Subtilis 26.9 2E+02 0.0043 24.8 6.1 52 48-99 90-141 (291)
499 TIGR03156 GTP_HflX GTP-binding 26.8 2.2E+02 0.0048 25.6 6.5 60 45-104 17-77 (351)
500 PF13380 CoA_binding_2: CoA bi 26.7 1.1E+02 0.0024 22.4 3.9 43 47-103 69-111 (116)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-54 Score=373.16 Aligned_cols=272 Identities=45% Similarity=0.779 Sum_probs=261.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||.|.+||||+|++++++++++.+++.|.|.++++.++||||+++++++|+ ++|++|++||++..+|.++++++
T Consensus 129 k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~---~~taAvivEPIQGEgGV~~~~~~ 205 (404)
T COG4992 129 KSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID---EDTAAVIVEPIQGEGGVIPAPPE 205 (404)
T ss_pred CcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc---cCeEEEEEecccCCCCCCCCCHH
Confidence 579999999999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
||++++++|++||++||.||+|+|+||+|+.|+++++++.||+++++|++|||+ |+|.+++++.+.+.+.+..|++||.
T Consensus 206 fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~-PigA~la~~~~~~~~~~G~HgSTfG 284 (404)
T COG4992 206 FLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFTPGDHGSTFG 284 (404)
T ss_pred HHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCCc-cceeeEEchhhhhcCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999998 9999999988888899999999999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+|+++++++.++++.+.++++.++.++.+++++++|+++...++ .+..+++.|+++.+.+.. ...+.++++.|+++
T Consensus 285 GNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~-~v~~vRG~GLmiGiel~~---~~~a~~~~~~~~~~ 360 (404)
T COG4992 285 GNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYP-LVKEVRGRGLMIGIELKE---PYRARDIVRALREE 360 (404)
T ss_pred cCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCC-ceeeeecceeEEEEEecC---cccHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999986 899999999999999985 22578999999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
|+++-+.+++.+|+.|++..+++++++++++|++++. ...
T Consensus 361 gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~-~~~ 400 (404)
T COG4992 361 GVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALA-AAS 400 (404)
T ss_pred CeEEecCCCCeEEecCCccCCHHHHHHHHHHHHHHHH-Hhh
Confidence 9999999999999999999999999999999999998 554
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-46 Score=335.44 Aligned_cols=276 Identities=44% Similarity=0.767 Sum_probs=249.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccc-cccCCCCCCCcccccCCC-----------------HHHHHHHHHh---cCCc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEA-IRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE---SGDQ 60 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~---~~~~ 60 (306)
+..||+|.++|||.|.+++++++.... +..+.|..+++.++||++ .+.+|..+.+ .+.+
T Consensus 143 r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~ 222 (447)
T COG0160 143 RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEE 222 (447)
T ss_pred CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCc
Confidence 578999999999999999999996444 467778888888888863 2335554443 3467
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccccee
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSA 140 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~ 140 (306)
++++++||+++.+|.++++++||++++++|++||+++|+||+|+||||+|+.|+++++++.||++|+||++++|+ |+|.
T Consensus 223 vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~-Pl~a 301 (447)
T COG0160 223 VAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGL-PLSA 301 (447)
T ss_pred eeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCC-ceeE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
+++++++++ ..+..+.++|.+|+++++++.++++.+.++++.++.++++++++++|.++..++| .+.++++.|+|+.+
T Consensus 302 vv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~-~IgdVRG~Glm~gi 379 (447)
T COG0160 302 VVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHP-LIGDVRGLGLMIGV 379 (447)
T ss_pred EeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcC-ceecccccceEEEE
Confidence 999999998 7788899999999999999999999999999999999999999999999999996 99999999999999
Q ss_pred EEecCC-----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 221 EFDKTA-----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 221 ~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++..+. .......+++.|+++|+++..++ .+.|||.||+..++++++.+++.|++++. +.
T Consensus 380 E~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~-~~ 446 (447)
T COG0160 380 ELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALK-EA 446 (447)
T ss_pred EEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 998642 23456789999999999999887 89999999999999999999999999998 53
No 3
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-47 Score=315.75 Aligned_cols=275 Identities=60% Similarity=1.010 Sum_probs=261.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCC-cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
+.+|++..++|||.|+++.+++.+++.+..|.|..|+ +..+||+|.++||.++++ ++++++++||++...|.++|++
T Consensus 150 ka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~ 227 (427)
T KOG1402|consen 150 KAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPP 227 (427)
T ss_pred ceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC--CCeeEEEeeccccccceEeCCc
Confidence 4689999999999999999999999899999999999 799999999999999997 7899999999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCC
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF 160 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (306)
.+|++.++||.+|++++|.||+|+|++|+|+.+.+++..+.||++.++|+++||+.|++.+++++++|-.+++..|+.||
T Consensus 228 GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTy 307 (427)
T KOG1402|consen 228 GYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTY 307 (427)
T ss_pred hhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-ChhhHHHHHHHHH
Q 021893 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-LPVSAYDICLKMK 239 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-~~~~~~~~~~~l~ 239 (306)
.+|+++++++.++++.+.++++.++...++..++.+|+++...+|+.+..+++.|++..+.+.+.+ .+.++.++|-.+.
T Consensus 308 ggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk 387 (427)
T KOG1402|consen 308 GGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALK 387 (427)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHccc
Confidence 999999999999999999999999999999999999999998888889999999999999988644 3467778899999
Q ss_pred HCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 240 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 240 ~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++|++..|.+++.|||.|++.++++|+++.++.|.+.+.
T Consensus 388 ~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 388 ENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999988764
No 4
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-44 Score=331.83 Aligned_cols=278 Identities=38% Similarity=0.735 Sum_probs=251.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIP 78 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~ 78 (306)
|++||.|+++|||++.+++++++...++.++.|..+++..+|++|.+++++.+++ +++++++|++||+++++|.+.+
T Consensus 170 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~p 249 (459)
T PRK11522 170 KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILP 249 (459)
T ss_pred CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccC
Confidence 4689999999999999999999987778888899899999999999999999974 3467999999999999999999
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcC--CCCc
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--PGEH 156 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~--~~~~ 156 (306)
+++||++++++|++||+++|+||+|+|||+.|..|.++++++.||+++++|++++|+.|+|.+++++++++.+. +..+
T Consensus 250 p~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~ 329 (459)
T PRK11522 250 PEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLH 329 (459)
T ss_pred CHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhccCCccc
Confidence 99999999999999999999999999999999998899999999999999999999449999999999998774 3467
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHH
Q 021893 157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 236 (306)
Q Consensus 157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 236 (306)
++||.+|+++++++.++++.+.++++.+++++++++++++|+++...+|..+..+++.|+++.+++.+ ......+.+
T Consensus 330 ~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~---~~~~~~i~~ 406 (459)
T PRK11522 330 TTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD---NEIGYNFAS 406 (459)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecC---chHHHHHHH
Confidence 88999999999999999999998889999999999999999999877754678999999999999975 234567899
Q ss_pred HHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 237 KMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 237 ~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.|+++||++.+. +.+.+|+.|++.++++|+++++++|+++++ ++.+
T Consensus 407 ~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~-~~~~ 454 (459)
T PRK11522 407 EMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA-AMRV 454 (459)
T ss_pred HHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHHH
Confidence 999999999865 457999999999999999999999999998 6654
No 5
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=2.1e-44 Score=333.29 Aligned_cols=303 Identities=80% Similarity=1.303 Sum_probs=266.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||.|.|+|||.+.+++++++++.....|.|..+++..+||+|++.+++.++.+++++++|++||+++++|.+.+++++
T Consensus 167 ~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~ 246 (474)
T PLN02624 167 AIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGY 246 (474)
T ss_pred cEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHH
Confidence 47999999999999999999998777778888989999999999999999998766789999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
|++|.++|++||+++|+||+|+|+|+.|..+..+++++.||++++||++++|+.++|+++.++++++.+.+..+..++++
T Consensus 247 L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g 326 (474)
T PLN02624 247 LKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGG 326 (474)
T ss_pred HHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCC
Confidence 99999999999999999999999999998887777889999999999999763399999999999988877778888899
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-hhhHHHHHHHHHHC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKER 241 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~~~~~~~l~~~ 241 (306)
++++++++.++++.+.++++.++..++.+.+++.|+++...++..+..+++.|.++.+.+..... .....++++.|+++
T Consensus 327 ~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~ 406 (474)
T PLN02624 327 NPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKER 406 (474)
T ss_pred CHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhC
Confidence 99999999999999988788899999999999999998777654466688999999988764210 23456899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc---CCCCCCCCCCCCCCCCccccccCC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL---PKMRKPKPADAPATPCHRCGRNLY 305 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
||++.|.+.+++||+|++.+++++|++++++|++++.+.. .+...+.++..++++|++|+++.|
T Consensus 407 GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (474)
T PLN02624 407 GLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHDLPKLQSAKKEKTPKAAPTPCDRCGRNLY 473 (474)
T ss_pred CeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCCCChhhhhhhhcc
Confidence 9999998889999999999999999999999998887333 344666777777899999999988
No 6
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=2.4e-44 Score=328.43 Aligned_cols=273 Identities=40% Similarity=0.732 Sum_probs=247.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIP 78 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~ 78 (306)
+++||+|+++|||.+.++++++++..++..+.|..+++..+|++|.+.+++.+++ +++++++|++||+++++|.+.+
T Consensus 163 r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p 242 (442)
T TIGR03372 163 KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILP 242 (442)
T ss_pred CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccC
Confidence 4689999999999999999999977777788888889999999999999988864 4567999999999999999999
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcC--CCCc
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--PGEH 156 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~--~~~~ 156 (306)
+++||++++++|++||+++|+||+|+|||+.|..|.++++++.||+++++|++++|+.|+|.+++++++++.+. +..+
T Consensus 243 ~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~ 322 (442)
T TIGR03372 243 PEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLH 322 (442)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhccCccc
Confidence 99999999999999999999999999999999998899999999999999999999449999999999998873 3467
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHH
Q 021893 157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 236 (306)
Q Consensus 157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 236 (306)
++||.+|+++++++.++++.+.++++.++.++.++++++.|+++...+|..+..+++.|+++.+++.+ ......+++
T Consensus 323 ~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~---~~~~~~i~~ 399 (442)
T TIGR03372 323 TTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRD---NEIGYAFAK 399 (442)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCC---hHHHHHHHH
Confidence 88999999999999999999998889999999999999999999887755678999999999999975 234568999
Q ss_pred HHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 237 KMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 237 ~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.|+++||++.+. +.+.+|+.|++.+|++|+++++++|++++
T Consensus 400 ~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 400 ELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred HHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 999999999764 35799999999999999999999998764
No 7
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.8e-44 Score=319.22 Aligned_cols=278 Identities=37% Similarity=0.639 Sum_probs=248.0
Q ss_pred cceEEEEecCCCCcccchhcccCCcccc-ccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC-CcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAI-RGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~-~~~~ 62 (306)
|+|+|+..+||||.|++++++++..... ..+.+..+++.++|.+. +++||++|.+++ ++++
T Consensus 137 r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IA 216 (449)
T COG0161 137 RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIA 216 (449)
T ss_pred ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEE
Confidence 5789999999999999999999955554 66666777765555442 678899999887 8899
Q ss_pred EEEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 63 GFLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 63 ~v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++++||+... +|++++++.||++++++|++|||+||+||+.+||||+|+.|+++++++.||++|++|++++||.|+|.+
T Consensus 217 AfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~ 296 (449)
T COG0161 217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAV 296 (449)
T ss_pred EEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhH
Confidence 9999998887 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCHHHHhhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 142 LADKEVMLCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 142 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
++++++.+.+... .|+.||++|++++++|++.++.++++++.++.++...++.++|++..... +.+.++++.|+
T Consensus 297 l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~-p~VgdVR~~Gl 375 (449)
T COG0161 297 LTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADH-PLVGDVRGLGL 375 (449)
T ss_pred hhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccC-CcEEEeeccce
Confidence 9999999887653 68899999999999999999999999999999999999999999964444 48899999999
Q ss_pred EEEEEEecCCChh------hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 217 FNAVEFDKTALPV------SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 217 ~~~i~~~~~~~~~------~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+..+++..+.... ....+.+.++++|++++|. .+.+-++|++..|+++|++++++++++++ +..
T Consensus 376 i~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-g~~i~~~PPliit~~eid~l~~~l~~al~-~~~ 445 (449)
T COG0161 376 IGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-GDVIYLMPPLIITREEIDELVDALREALD-ETL 445 (449)
T ss_pred EEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-CCEEEEcCCccCCHHHHHHHHHHHHHHHH-HHH
Confidence 9999998765322 2667889999999999998 55999999999999999999999999998 654
No 8
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=8.9e-43 Score=320.55 Aligned_cols=278 Identities=31% Similarity=0.565 Sum_probs=240.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHH-hcCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFK-ESGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~-~~~~~~~~ 63 (306)
|++||.|.|+|||++.+++++++.......+.|..+++..+|+++ ++.+|+.++ .+++++++
T Consensus 137 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAA 216 (451)
T PRK07678 137 RYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAA 216 (451)
T ss_pred CcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 578999999999999999999997766677777777776555442 233677776 34578999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
||+||+++.+|.++++++||++++++|++||++||+||+++||||.|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus 217 vi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~ 296 (451)
T PRK07678 217 VIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAV 296 (451)
T ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEE
Confidence 99999999999999999999999999999999999999999999999988888899999999999999988449999999
Q ss_pred CHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 144 DKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 144 ~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
++++++.+.+ ..+++||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|++
T Consensus 297 ~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~v~~vrg~Gl~ 375 (451)
T PRK07678 297 KKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHP-LVGDIRGKGLL 375 (451)
T ss_pred cHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEeeceE
Confidence 9999988764 2478899999999999999999999889999999999999999988776664 78899999999
Q ss_pred EEEEEecCC------ChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 218 NAVEFDKTA------LPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 218 ~~i~~~~~~------~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+++..+. .......+...|+++|+++.+.+ .+.+|++|++.+|++||+++++++++++. ++
T Consensus 376 ~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~-~~ 450 (451)
T PRK07678 376 VGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALE-RI 450 (451)
T ss_pred EEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-hc
Confidence 999985321 11235678899999999987642 37899999999999999999999999998 65
No 9
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=8.5e-43 Score=317.31 Aligned_cols=271 Identities=33% Similarity=0.575 Sum_probs=245.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++||+++++|||.+.+++++++.+.+...+.|..+++..+||||++.+++.++ +++++|++||+++++|.++++++
T Consensus 124 r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~ 200 (397)
T TIGR03246 124 KSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPA 200 (397)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHH
Confidence 568999999999999999999887667777888888889999999999999997 57999999999999999888999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
+|++|+++|++||+++|+||+|+|+|+.|..++.+.+++.||++++||+++||+ |+|++++++++++.+....+..+|+
T Consensus 201 ~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG~-pigav~~~~~i~~~~~~~~~~~t~~ 279 (397)
T TIGR03246 201 FLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGGF-PIGAMLTTTEIAAHLKVGTHGTTYG 279 (397)
T ss_pred HHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCCc-ceeEEEEcHHHHHhccCCCcCCCCC
Confidence 999999999999999999999999999999887788899999999999999998 9999999999999988767788899
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+++++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.++.+.+.+.. ......+++.|+++
T Consensus 280 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~l~~~ 357 (397)
T TIGR03246 280 GNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYN-VFSEIRGKGLLIGAVLTEAY-QGKAKQFVNAAAEE 357 (397)
T ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEeeecCceEEEEEEcCch-hhHHHHHHHHHHHC
Confidence 99999999999999988888999999999999999999876653 66788899999998876421 13467899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|+++.+.+.+++|++|++.+++++|++++++|++++.
T Consensus 358 Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~ 394 (397)
T TIGR03246 358 GVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIE 394 (397)
T ss_pred CeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999887778999999999999999999999999987
No 10
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.2e-43 Score=320.43 Aligned_cols=276 Identities=28% Similarity=0.478 Sum_probs=243.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcCCcEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGF 64 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~~~~~~v 64 (306)
|+|||+|+++|||.+.+++++++...++..|.|..+++..+|+++ ++.+++.++++++++++|
T Consensus 146 r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAv 225 (453)
T PRK06943 146 KREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAAL 225 (453)
T ss_pred CCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 578999999999999999999998777777777777665555443 578888898777889999
Q ss_pred EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
++|| +++.+|.++++++||++++++|++||++||+||+++||||+|..|+++++++.||+++++|+++||+.|+|.+++
T Consensus 226 iiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~ 305 (453)
T PRK06943 226 IVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLS 305 (453)
T ss_pred EEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEE
Confidence 9999 599999999999999999999999999999999999999999999999999999999999999999559999999
Q ss_pred CHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 144 DKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 144 ~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
++++++.+.. ..+.+||.+|+++++++.++++.+.++++.+++++.+++++++|+++. .++ .+..+++.|++
T Consensus 306 ~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~-~v~~vrG~Gl~ 383 (453)
T PRK06943 306 RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHP-QVRHLRQRGTI 383 (453)
T ss_pred cHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCC-CEEeEeccccE
Confidence 9999988753 247789999999999999999999999999999999999999999985 454 67799999999
Q ss_pred EEEEEecCC--ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 218 NAVEFDKTA--LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 218 ~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+++..+. .......+.+.++++|+++.+.+ +.+|++|++.+|++||++++++|+++++ ++
T Consensus 384 ~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-~~l~~~Ppl~it~~eid~~~~~l~~al~-~~ 447 (453)
T PRK06943 384 FAFDVALDGDAARTFSRRFFEAALERELLLRPIG-TTVYLMPPYVLDDDEIAWLAERTRATLD-AT 447 (453)
T ss_pred EEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 999996321 11225578899999999998864 5799999999999999999999999998 65
No 11
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-43 Score=320.73 Aligned_cols=277 Identities=31% Similarity=0.527 Sum_probs=241.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC---------CC--------HHHHHHHHHhcC-CcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF---------GD--------ITALEKIFKESG-DQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~d--------~~~le~~i~~~~-~~~~~ 63 (306)
|+|||+|+++|||.+.+++++++.+.+...+.|..+.+..+++ +| ++.+++.+++++ +++++
T Consensus 139 r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAA 218 (459)
T PRK05965 139 KKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAA 218 (459)
T ss_pred ccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 5789999999999999999998876666666665555443332 23 267888887654 68999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
|++||+++.+|.++++++||++|+++|++||++||+||+++||||.|..|+++++++.||+++++|+++||++|+|.+++
T Consensus 219 vIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~ 298 (459)
T PRK05965 219 FFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLM 298 (459)
T ss_pred EEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999659999999
Q ss_pred CHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 144 DKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 144 ~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
++++++.+.. ..+++||.+|+++++++.++++.+.++++.++.++.+++++++|+++. .++ .+..+++.|+
T Consensus 299 ~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~-~v~~vrG~Gl 376 (459)
T PRK05965 299 SDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHP-LVGDVRGRGL 376 (459)
T ss_pred cHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCC-CEEEEeecce
Confidence 9999987753 257889999999999999999999999999999999999999999985 454 7889999999
Q ss_pred EEEEEEecCCC---h-----hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 217 FNAVEFDKTAL---P-----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 217 ~~~i~~~~~~~---~-----~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++.+++..+.. . .....+.+.++++|+++.+.+.+.+|++|++.++++||++++++|.++++ ++
T Consensus 377 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~-~~ 448 (459)
T PRK05965 377 LGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD-DV 448 (459)
T ss_pred EEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 99999864210 0 12456888999999999987778899999999999999999999999999 76
No 12
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=319.47 Aligned_cols=278 Identities=30% Similarity=0.509 Sum_probs=242.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC------------------CHHHHHHHHHh-cCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG------------------DITALEKIFKE-SGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------d~~~le~~i~~-~~~~~~ 62 (306)
|+|||.|.++|||.+.+++++++.+.+...+.|..+++..++++ +++.+|+.+.+ .+++++
T Consensus 143 r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iA 222 (461)
T PRK07482 143 KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIA 222 (461)
T ss_pred CceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 67899999999999999999999777777777777766544432 35788888864 346799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++.+|.++++++|+++|+++|++||++||+||+++||||.|..|.++++++.||+++++|+++||+.|+|.++
T Consensus 223 Avi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~ 302 (461)
T PRK07482 223 AFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSI 302 (461)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999966999999
Q ss_pred eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+.. ..+.+||.+|+++++++.++++.+.++++.++.+++++++++.|+++...++ .+..+++.|
T Consensus 303 ~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~G 381 (461)
T PRK07482 303 VGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHP-LVGEVRGVG 381 (461)
T ss_pred ecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeece
Confidence 99999887652 2477899999999999999999999999999999999999999999887774 788999999
Q ss_pred eEEEEEEecCCC---h-----hhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTAL---P-----VSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~~---~-----~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++.+++..+.. . .....++..|+++|+++.+. ..+.+|+.|++.+|++||++++++|+++++ ++
T Consensus 382 lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 455 (461)
T PRK07482 382 MLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD-EV 455 (461)
T ss_pred eEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 999999964221 0 12457889999999998653 357899999999999999999999999998 65
No 13
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.1e-42 Score=314.24 Aligned_cols=276 Identities=38% Similarity=0.615 Sum_probs=249.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++||.|+++|||.+.+++++++.+.+...+.|..+++..+|++|++.+++.++. +++++|++||+++.+|.+.++++
T Consensus 131 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~aavi~eP~~~~gg~~~~~~~ 208 (408)
T PRK04612 131 KRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG--GDVAAVMLEPIQGEGGVMPAAPG 208 (408)
T ss_pred CcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC--CCEEEEEECCccCCCCCcCCCHH
Confidence 4589999999999999999999987777788888788888999999999999963 57999999999999998888899
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|+++|++||+++|+||+|+|+++.|..+....+++.||+.++||++++|+ |+|++++++++++.+....+..+|+
T Consensus 209 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~-piga~~~~~~~~~~~~~~~~~~t~~ 287 (408)
T PRK04612 209 FLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAETMQFGAHGTTFG 287 (408)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCC-ceEEEEECHHHHhhhcCCCcCCCCC
Confidence 999999999999999999999999999998776666788999999999999998 9999999999988887777888999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+++++++++.++++.+.++++.++++++.++++++|+++...+ +.+..+++.|+++.+++.... ......+++.|+++
T Consensus 288 ~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~-~~i~~vrg~Gl~~~i~~~~~~-~~~a~~i~~~l~~~ 365 (408)
T PRK04612 288 GNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEF-GVFAQVRGRGLMLGAVLAPAH-AGQAGAILDLAAEH 365 (408)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-CCeeeeeccceEEEEEecCch-hhHHHHHHHHHHHC
Confidence 9999999999999999988899999999999999999998877 478899999999999986311 23466789999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
|+++.+.+.+.+|+.|++..+++||++++++|++++. ++.+
T Consensus 366 Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~-~~~~ 406 (408)
T PRK04612 366 GLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALA-DYVA 406 (408)
T ss_pred CeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHHH-HHhh
Confidence 9999988778999999999999999999999999998 7654
No 14
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-42 Score=319.59 Aligned_cols=276 Identities=27% Similarity=0.472 Sum_probs=242.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcCCcEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGF 64 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~~~~~~v 64 (306)
|.|||+|+++|||.+.+++++++...+...|.|..+++.++|+++ ++.+++.++++++++++|
T Consensus 161 r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAv 240 (472)
T PRK08742 161 RTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICAL 240 (472)
T ss_pred CcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 579999999999999999999987777778888887777777653 567788887666789999
Q ss_pred EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
++|| +++.+|.++++++|+++++++|++||++||+||+++||||+|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus 241 I~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~ 320 (472)
T PRK08742 241 ILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLA 320 (472)
T ss_pred EEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeec
Confidence 9999 699999999999999999999999999999999999999999999999999999999999999999659999999
Q ss_pred CHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 144 DKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 144 ~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
++++++.+.. ..+.+||.+|+++++++.++++.+.++++.++.++.++++++.++.+ ..++ .+.++++.|++
T Consensus 321 ~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~-~i~dvRG~Gl~ 398 (472)
T PRK08742 321 TQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHP-HVADVRQAGMV 398 (472)
T ss_pred cHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCC-CeeeEeccceE
Confidence 9999987642 24778999999999999999999999999999999999999877775 4453 78899999999
Q ss_pred EEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 218 NAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 218 ~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+++..+... .....+.+.|+++|+++.+.+ +.|||.|++..|+++|++++++|+++++ ++
T Consensus 399 ~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~vi~~~PpL~it~~ei~~~~~~l~~~l~-~~ 468 (472)
T PRK08742 399 VAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-DVLYWMPPYCVDEAQLALLADTTRHAID-EA 468 (472)
T ss_pred EEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 99999643210 113467888999999998874 7999999999999999999999999998 64
No 15
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=1.6e-42 Score=313.21 Aligned_cols=270 Identities=37% Similarity=0.631 Sum_probs=245.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.|||.|+++|||.+.++++++++..+...+.|..+++.++|++|++.|++.++. .++++|++||+++++|...++++
T Consensus 111 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~aavi~eP~q~~gg~~~~~~~ 188 (382)
T PLN00144 111 ATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQK--GKTAAVFVEPVQGEGGIYPATKE 188 (382)
T ss_pred cceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCC--CCeEEEEEccccCCCCCccCCHH
Confidence 4689999999999999999999987777788888889999999999999999863 57999999999999888888999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
|+++|+++|++||+++|+||+|+||++.|..++++.+++.||++++||++++|+ |+|++++++++++.+....+..++.
T Consensus 189 ~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G~-pig~v~~~~~~~~~~~~~~~~~T~~ 267 (382)
T PLN00144 189 FLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGL-PIGAVLVTEKVASAINPGDHGSTFA 267 (382)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCCc-ceEEEEEcHHHHhccCCCCCCCCCC
Confidence 999999999999999999999999999998777778899999999999999998 9999999999999988777889999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+++++++++.++++.+.++++.+++++.++++++.|+++...+| .+..+++.|+++|+.+.. ....+++.++++
T Consensus 268 ~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~~~~vrg~G~~~~l~l~~-----~~~~~~~~~~~~ 341 (382)
T PLN00144 268 GGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNP-HVKEVRGVGLLVGIQLDV-----PAGPLVDACRDS 341 (382)
T ss_pred CCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCC-CceeeecCceEEEEEecC-----ccHHHHHHHHHC
Confidence 99999999999999999888999999999999999999877764 667888999999999842 346799999999
Q ss_pred CceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 242 GILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 242 Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
||.+.+.+ .+.||++|+...+++++++++++|++++. ++
T Consensus 342 Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~-~~ 381 (382)
T PLN00144 342 GLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLP-AL 381 (382)
T ss_pred CeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-hc
Confidence 99999864 48999999998999999999999999987 54
No 16
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.3e-42 Score=318.23 Aligned_cols=276 Identities=30% Similarity=0.512 Sum_probs=244.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcCCcEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGF 64 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~~~~~~v 64 (306)
|+|||+|+++|||.+.+++++++...+...+.|..+++..+|+++ ++.+|+.+.++++++++|
T Consensus 139 r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAv 218 (466)
T PRK07030 139 KKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAV 218 (466)
T ss_pred CcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 578999999999999999999997777777778777776666554 567788888777889999
Q ss_pred EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
++|| +++.+|.+.++++|+++|+++|++||+++|+||+++||||+|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus 219 i~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~ 298 (466)
T PRK07030 219 IVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLT 298 (466)
T ss_pred EEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEe
Confidence 9999 799999999999999999999999999999999999999999999999999999999999999999559999999
Q ss_pred CHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 144 DKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 144 ~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
++++++.+.. ..+.+||.+|+++++++.++++.+.++++.++.+++++++++.|+++. .++ .+..+++.|+
T Consensus 299 ~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~-~v~~vrG~Gl 376 (466)
T PRK07030 299 TDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DHP-HVAEVRQTGM 376 (466)
T ss_pred cHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCC-CEEEeEecee
Confidence 9999987742 257889999999999999999999999999999999999999999985 564 7889999999
Q ss_pred EEEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 217 FNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 217 ~~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++.+++..+... .....+.+.|+++|+++.+.+ +.+|+.|++.+|++||++++++|+++++ ++
T Consensus 377 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~i~~~Ppl~it~~eid~~~~~l~~al~-~~ 447 (466)
T PRK07030 377 ILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-SVVYFLPPYVITPEQIDFLAEVASEGID-IA 447 (466)
T ss_pred EEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHHHHHHHHHHHH-HH
Confidence 999998642210 113468899999999998864 6899999999999999999999999999 87
No 17
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-42 Score=318.14 Aligned_cols=276 Identities=33% Similarity=0.550 Sum_probs=241.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC---CcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG---DQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~---~~~ 61 (306)
|++||.|+++|||++.+++++++.......+.|..+++.++|+++ ++.+++.+++.. +++
T Consensus 153 r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~i 232 (464)
T PRK06938 153 RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLP 232 (464)
T ss_pred CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCce
Confidence 579999999999999999999987666666777777765555532 577888887532 469
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||++..+|.++++++||++++++|++||++||+||+++||||+|..|.++++++.||+++++|+++||+ |+|.+
T Consensus 233 AAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~-PlsAv 311 (464)
T PRK06938 233 AAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSL-PLAVV 311 (464)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCC-ceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++++++ +.+.+..+.+||.+|+++++++.++++.+.++++.++.++++++++++|+++...++ .+..+++.|+++.++
T Consensus 312 ~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Glm~gie 389 (464)
T PRK06938 312 VYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRGLMLGVE 389 (464)
T ss_pred eehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEE
Confidence 998885 666666788999999999999999999999988999999999999999999987774 889999999999999
Q ss_pred EecCCC-----------hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 222 FDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 222 ~~~~~~-----------~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+..+.. ......+.+.|+++|+++.+.+ .+.+|+.|++.+|++|++++++++++++. ++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~-~~ 461 (464)
T PRK06938 390 IVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVA-AA 461 (464)
T ss_pred eccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence 964210 1124568889999999998754 47999999999999999999999999998 64
No 18
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=2.8e-42 Score=314.52 Aligned_cols=272 Identities=32% Similarity=0.573 Sum_probs=242.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC--------CHHHHHHHHHhcC---CcEEEEEEcccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQ 70 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~le~~i~~~~---~~~~~v~v~~~~ 70 (306)
|++||.|+++|||.+.++++++++......+.+..+++..+|++ +++.+++.+++++ +++++|++||++
T Consensus 125 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~ 204 (412)
T TIGR02407 125 RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQ 204 (412)
T ss_pred CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEecccc
Confidence 57899999999999999999998777777777777777888874 3778999997653 468999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-CcccceeeEeCHHHHh
Q 021893 71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVML 149 (306)
Q Consensus 71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~ 149 (306)
+++|.++++++||++|+++|++||+++|+||+++||||.|..++++.+++.||++++||++++ |+ |+|++++++++ +
T Consensus 205 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~-pigav~~~~~~-~ 282 (412)
T TIGR02407 205 GEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGL-PLALTLIKPEL-D 282 (412)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCcc-ceeEEEEchhh-h
Confidence 999999999999999999999999999999999999999999888889999999999999998 98 99999999886 6
Q ss_pred hcCCCCccCCCCCCHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh
Q 021893 150 CIQPGEHGSTFGGNPLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228 (306)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~aa~~al~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 228 (306)
.+.+..+..+|.+|+++++++.++++. +.++++.+++++.+++++++|+.+...++..+..+++.|+++++.+++ .
T Consensus 283 ~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~---~ 359 (412)
T TIGR02407 283 VWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGD---G 359 (412)
T ss_pred ccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecC---h
Confidence 666667888999999999999999995 777779999999999999999998877754567899999999999975 3
Q ss_pred hhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 229 VSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 229 ~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.....+.+.|+++||++.+.+ .+.||++|++.+++++++.++++|+++++
T Consensus 360 ~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 360 DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred HHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 456789999999999998653 47899999999999999999999999886
No 19
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=3.9e-42 Score=313.84 Aligned_cols=276 Identities=31% Similarity=0.532 Sum_probs=247.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++||+|+++|||.+.+++++++.+.+...+.|..+++..+|++|++.+++.++ +++++|++||+++++|.+.++++
T Consensus 128 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~ 204 (406)
T PRK12381 128 KSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID---DQTCAVIVEPIQGEGGVIPADKA 204 (406)
T ss_pred CCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHH
Confidence 578999999999999999999997777777888888888899999999999997 57999999999999998888999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|+++|++||+++|+||+|+|+++.|..+.++.+++.||++++||++++|+ |+|++++++++++.+....+..+|.
T Consensus 205 ~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG~-~ig~~~~~~~~~~~~~~~~~~~t~~ 283 (406)
T PRK12381 205 FLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGGF-PIGAMLTTEKCASVMTVGTHGTTYG 283 (406)
T ss_pred HHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCCC-ceEEEEEcHHHHhhcCCCCCCCCCC
Confidence 999999999999999999999999999998776677889999999999999998 9999999999999998777888899
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
++++.++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|.++++.+++.. ......+.+.|+++
T Consensus 284 ~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~vrg~Gl~~~~~l~~~~-~~~~~~~~~~l~~~ 361 (406)
T PRK12381 284 GNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYG-LFSEIRGLGLLIGCVLNAEY-AGKAKQISQEAAKA 361 (406)
T ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CEEEEecCeEEEEEEecCch-hhHHHHHHHHHHHC
Confidence 99999999999999998878999999999999999999876653 56788899999999886411 12456889999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM 284 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~ 284 (306)
||.+.+.+++.+|++|++.+++++|++++++|+++++ ++.+.
T Consensus 362 Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~~~~ 403 (406)
T PRK12381 362 GVMVLIAGPNVVRFAPALNISEEEITTGLDRFARACE-RFVSR 403 (406)
T ss_pred CcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HHHhc
Confidence 9999887778999999999999999999999999998 77553
No 20
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-42 Score=315.25 Aligned_cols=279 Identities=32% Similarity=0.524 Sum_probs=241.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CC--------------HHHHHHHHHh-cCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GD--------------ITALEKIFKE-SGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d--------------~~~le~~i~~-~~~~~~ 62 (306)
|+|||.|+++|||.+.+++++++.......+.|..+++..+++ ++ ++.+++++.+ ++++++
T Consensus 122 r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iA 201 (443)
T PRK07483 122 RRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVA 201 (443)
T ss_pred CcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 5789999999999999999999977777777777777655443 33 2577776653 446899
Q ss_pred EEEEccccC-CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 63 GFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 63 ~v~v~~~~~-~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
+|++||++. .+|.+.++++||++|+++|++||+++|+||+++||||+|..|.++++++.||+++++|+++||+.|+|.+
T Consensus 202 AvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av 281 (443)
T PRK07483 202 AFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAV 281 (443)
T ss_pred EEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEE
Confidence 999999997 5799999999999999999999999999999999999999998999999999999999999996699999
Q ss_pred EeCHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 142 LADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 142 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
++++++++.+... .+++||.+|+++++++.++++.+.++++.+++++.++++++.|+++...++ .+..+++.|++
T Consensus 282 ~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vRG~Glm 360 (443)
T PRK07483 282 LASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHP-HVGDIRGRGLF 360 (443)
T ss_pred EEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCC-CeeeEeecccE
Confidence 9999999887542 477899999999999999999999999999999999999999999877774 78899999999
Q ss_pred EEEEEecCCC--------hhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 218 NAVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 218 ~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+.+++..+.. ......+.+.++++|+++.+.+ ++.+||.|++..++++|++++++|++++. ++.
T Consensus 361 ~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~-~~~ 439 (443)
T PRK07483 361 VGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAID-AAL 439 (443)
T ss_pred EEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 9999864210 0124578899999999997653 46999999999999999999999999998 654
No 21
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-42 Score=314.80 Aligned_cols=278 Identities=32% Similarity=0.579 Sum_probs=239.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--------CC--CHHHH--------HHHHH-hcCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FG--DITAL--------EKIFK-ESGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--d~~~l--------e~~i~-~~~~~~~ 62 (306)
|++||.|+++|||++.+++++++.+.....+.|..+++..++ ++ |.+.+ |+.|. +++++++
T Consensus 136 r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iA 215 (449)
T PRK07481 136 RTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIA 215 (449)
T ss_pred CcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 578999999999999999999987767777777777765443 33 54444 44444 3447899
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++.+|.+.++++|+++++++|++||++||+||+++||||.|..+.++.+++.||+++++|+++||+.|+|.++
T Consensus 216 AviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~ 295 (449)
T PRK07481 216 AFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATM 295 (449)
T ss_pred EEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEE
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999955999999
Q ss_pred eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+.+ ..+++||.+|+++++++.++++.+.++++.+++++.++++++.|+++...+ +.+..+++.|
T Consensus 296 ~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrG~G 374 (449)
T PRK07481 296 VNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERF-ELVGDVRGKG 374 (449)
T ss_pred EcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEeecc
Confidence 99999988754 257789999999999999999999998999999999999999999998777 4788999999
Q ss_pred eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++.+++..+.. ......+.+.|+++|+++.+.+ +.+|++|++.+|++||++++++|+++++ ++.
T Consensus 375 lm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~ 447 (449)
T PRK07481 375 LMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-TKIILSPPLVIQREDVDRIVDALDAGLS-AVP 447 (449)
T ss_pred eEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-hcc
Confidence 999999854210 1124568889999999998874 4699999999999999999999999998 653
No 22
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=5.5e-42 Score=313.96 Aligned_cols=278 Identities=32% Similarity=0.575 Sum_probs=242.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC--------CHHHHHHHHHhcC---CcEEEEEEcccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQ 70 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~le~~i~~~~---~~~~~v~v~~~~ 70 (306)
|++||+|+++|||++.+++++++++..+..+.|..+++..+|++ |++.+++.+++++ +++++|++||++
T Consensus 129 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~ 208 (425)
T PRK09264 129 RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQ 208 (425)
T ss_pred CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEeccc
Confidence 57899999999999999999998776677777777777777774 7888999997642 468999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-CcccceeeEeCHHHHh
Q 021893 71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVML 149 (306)
Q Consensus 71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~ 149 (306)
+++|.+++++++|++|+++|++||+++|+||+|+|||+.|..+.++.+++.||++++||++++ |+ |+|++++++++ .
T Consensus 209 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~-pigav~~~~~i-~ 286 (425)
T PRK09264 209 GEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGL-PMALVLIKPEL-D 286 (425)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCCcc-ceEEEEEchhh-h
Confidence 999999999999999999999999999999999999999998888889999999999999997 98 99999999887 4
Q ss_pred hcCCCCccCCCCCCHHHHHHHHHHH-HHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh
Q 021893 150 CIQPGEHGSTFGGNPLASAVAIASL-DVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228 (306)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~aa~~al-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 228 (306)
.+....+..+|.+|+++++++.+++ +.+.++++.+++++++++++++|+++...++.....+++.|+++++.+.+ .
T Consensus 287 ~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~---~ 363 (425)
T PRK09264 287 VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD---G 363 (425)
T ss_pred ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC---h
Confidence 5655567788999999999999999 56666679999999999999999998766643346788999999999874 3
Q ss_pred hhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893 229 VSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 285 (306)
Q Consensus 229 ~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~ 285 (306)
.....+++.|+++||.+.+.+ ...||++|++.+|++++++++++|+++++ ++.+..
T Consensus 364 ~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~-~~~~~~ 421 (425)
T PRK09264 364 ELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVA-EVLAEE 421 (425)
T ss_pred HHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHhcc
Confidence 456789999999999998754 47999999999999999999999999999 765433
No 23
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.3e-41 Score=315.16 Aligned_cols=276 Identities=28% Similarity=0.476 Sum_probs=236.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHh-cCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~-~~~~~~ 62 (306)
+.+||+|+++|||.+++++++++.+.+...+.+..+++..+++++ .++||+++.+ ++++++
T Consensus 183 r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iA 262 (504)
T PLN02760 183 KKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIA 262 (504)
T ss_pred CcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 478999999999999999999887666556655545444444321 2457877753 346799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.+.++++|+++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.|+|.++
T Consensus 263 AvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~ 342 (504)
T PLN02760 263 AFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVL 342 (504)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEe
Confidence 99999999999999999999999999999999999999999999999999989999999999999999998866999999
Q ss_pred eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+.. ..++.||.+|+++++++.++++.+.++++.++++++.+++++.|+++ ..+ +.+..+++.|
T Consensus 343 ~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~-~~v~~vrG~G 420 (504)
T PLN02760 343 VSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGS-PIIGEIRGTG 420 (504)
T ss_pred ecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcC-CCeeeEEeCc
Confidence 99999988753 25788999999999999999999999899999999999999999998 555 4788999999
Q ss_pred eEEEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++.+++.++... .....+.+.|+++||++.+.+ +.+|++|++.+|++||++++++|++++. ++
T Consensus 421 l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~lrl~Ppl~it~eeid~~~~~l~~al~-~~ 492 (504)
T PLN02760 421 LILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-DNIMMSPPLIITPEEVDELISIYGKALK-AT 492 (504)
T ss_pred eEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 9999998643210 114568899999999998864 5899999999999999999999999998 65
No 24
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-41 Score=308.45 Aligned_cols=278 Identities=36% Similarity=0.662 Sum_probs=243.8
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC----------HHHHHHHHHh--cCCcEEEEEEcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEP 68 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----------~~~le~~i~~--~~~~~~~v~v~~ 68 (306)
|++||.|+++|||.+.+++++++. ......+.|..+++.++|+++ ++.+++.+++ .++++++|++||
T Consensus 127 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EP 206 (425)
T PRK07495 127 RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEP 206 (425)
T ss_pred CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence 578999999999999999998875 346677777778888888765 5566877763 346799999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+++++|.++++++++++|+++|++||+++|+||+|+||++.|..+.++.+++.||++++||++++|+ |+|+++++++++
T Consensus 207 v~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~-pigav~~~~~i~ 285 (425)
T PRK07495 207 VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIM 285 (425)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCc-cceEEEEcHHHH
Confidence 9999998889999999999999999999999999999999998888888899999999999999998 999999999999
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 227 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~- 227 (306)
+.+....+..+|.+++++++++.++++.+.++++.+++++++++++++|+++...+| .+..+++.|+++++++.+...
T Consensus 286 ~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~iel~~~~~~ 364 (425)
T PRK07495 286 DAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVP-EIADIRGPGFMNAVEFNDADSG 364 (425)
T ss_pred hccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeecCceEEEEEEecCCCC
Confidence 988877788899999999999999999999888999999999999999999987774 678899999999999964220
Q ss_pred ---hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 228 ---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 228 ---~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
......+.+.++++|+++.+.+ .+.+||.|++..|++++++++++|+++++ ++.
T Consensus 365 ~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~-~~~ 423 (425)
T PRK07495 365 LPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASIL-EAS 423 (425)
T ss_pred CccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HHh
Confidence 1124568899999999987643 47999999999999999999999999998 654
No 25
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-41 Score=313.59 Aligned_cols=278 Identities=31% Similarity=0.583 Sum_probs=243.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----------------CHHHHHHHHHhcCCcEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESGDQIAGF 64 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~i~~~~~~~~~v 64 (306)
|++||.|+++|||.+.+++++++...++..+.|..+++..+|++ +++.+|+.++++++++++|
T Consensus 148 r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAv 227 (460)
T PRK06916 148 KQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAI 227 (460)
T ss_pred CcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 57999999999999999999999877777787877776665543 2567788888777889999
Q ss_pred EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
++|| +++.+|.++++++||++++++|++||+++|+||+++||||.|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus 228 i~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~ 307 (460)
T PRK06916 228 IVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVT 307 (460)
T ss_pred EEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeee
Confidence 9999 699999999999999999999999999999999999999999999899999999999999999999559999999
Q ss_pred CHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 144 DKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 144 ~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
++++++.+.. ..+.+||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. + +.+..+++.|+
T Consensus 308 ~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~-~~v~~vrG~Gl 385 (460)
T PRK06916 308 TDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-L-KHVGDIRQLGL 385 (460)
T ss_pred cHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-C-CCeEEeecCCc
Confidence 9999987642 2477899999999999999999999988999999999999999999864 5 36789999999
Q ss_pred EEEEEEecCCC-------h-hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 217 FNAVEFDKTAL-------P-VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 217 ~~~i~~~~~~~-------~-~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
++.+++..+.. . .....+.+.|+++|+++.+.+ +.+|+.|++.++++||++++++|+++++ ++..
T Consensus 386 m~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~-~~~~ 458 (460)
T PRK06916 386 MVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-NTIVFMPPLASTIDELDEMLRILYKAIS-DVTE 458 (460)
T ss_pred eeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHH-hhcc
Confidence 99999864321 0 113578899999999998864 6899999999999999999999999998 7653
No 26
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-41 Score=310.42 Aligned_cols=279 Identities=32% Similarity=0.595 Sum_probs=242.7
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCCCH-----------------HHHHHHHHhc--CCcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKES--GDQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~i~~~--~~~~ 61 (306)
|++||.|+++|||++.+++++++.. .....+.|..+++..+|++|. +.+++.+++. ++++
T Consensus 129 r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (445)
T PRK08593 129 RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEV 208 (445)
T ss_pred CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCce
Confidence 5789999999999999999998843 345667777788777776542 4455555432 3679
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||+++++|.+.++++||++|+++|++||++||+||+|+|||+.|..+.++.+++.||++++||++++|+ |+|++
T Consensus 209 AavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~-p~gav 287 (445)
T PRK08593 209 ACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGM-PMSAI 287 (445)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCc-ccEEE
Confidence 99999999999999999999999999999999999999999999999999887888899999999999999998 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++++++++.+....+..|+.+++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|+++.+.
T Consensus 288 ~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gi~ 366 (445)
T PRK08593 288 VGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGLSIGID 366 (445)
T ss_pred EEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeccceEEEEE
Confidence 9999999988766677799999999999999999999888999999999999999999887774 888999999999998
Q ss_pred EecCC-----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 222 FDKTA-----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+..+. .......+++.|+++||++.+...+.+|++|++.+|++||+.++++++++++ ++.+
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~-~~~~ 432 (445)
T PRK08593 367 IVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFT-ALEA 432 (445)
T ss_pred EecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HHhc
Confidence 86421 1123567899999999999876668999999999999999999999999999 7754
No 27
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=311.51 Aligned_cols=277 Identities=32% Similarity=0.549 Sum_probs=239.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-------------HHHH----HHHHHh---cCCcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-------------ITAL----EKIFKE---SGDQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------------~~~l----e~~i~~---~~~~~ 61 (306)
|++||.|+++|||++.++++++++...+..+.|..+++..+|+++ .+.+ ++.+.+ .++++
T Consensus 147 r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (459)
T PRK06931 147 RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKP 226 (459)
T ss_pred CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCce
Confidence 578999999999999999999987767777778888877777664 2333 333432 23569
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||++..+|.++++++||++++++|++||+++|+||+++||||.|..++++++++.||+++++|+++||+ |+|.+
T Consensus 227 AAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~-Pi~av 305 (459)
T PRK06931 227 AAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGL-PLAVL 305 (459)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCc-ceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 99998
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
+.++++ +.+.+..+.+||.+|+++++++.++++.+.++++.++.++.++++++.|+++...+| .+..+++.|+++.++
T Consensus 306 ~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Glm~gie 383 (459)
T PRK06931 306 GIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP-CIGNVRGRGLMIGIE 383 (459)
T ss_pred eeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEeEecCceEEEEE
Confidence 888774 777666788999999999999999999999989999999999999999999987775 789999999999999
Q ss_pred EecCCC-----------hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 222 FDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 222 ~~~~~~-----------~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+..+.. ......+.+.|+++|+++.+.+ .+.+|+.|++.+|++++++++++|++++. ++.
T Consensus 384 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~-~~~ 456 (459)
T PRK06931 384 IVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALL-AAV 456 (459)
T ss_pred EccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH-HHH
Confidence 864210 1124567888999999997653 57899999999999999999999999998 653
No 28
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=2.2e-41 Score=308.62 Aligned_cols=271 Identities=34% Similarity=0.546 Sum_probs=238.0
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCccccc-----------CCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI 69 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~d~~~le~~i~~~~~~~~~v~v~~~ 69 (306)
|+|||.|+++|||.+.++++++++ ......|.|..+++..+| ++|++.+++.++++++++++|++||+
T Consensus 134 r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi 213 (428)
T PRK07986 134 RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPI 213 (428)
T ss_pred CcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEech
Confidence 579999999999999999999874 334556667666654433 35778999999876678999999996
Q ss_pred -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+..+|.+.+++++|++|+++|++||++||+||+|+|||+.|..|.++++++.||+++++|+++||+.++|.++++++++
T Consensus 214 ~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~ 293 (428)
T PRK07986 214 VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVA 293 (428)
T ss_pred hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHH
Confidence 8888988999999999999999999999999999999999999988999999999999999999955999999999999
Q ss_pred hhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 149 LCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 149 ~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+.+... .++.||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. ++ .+.++++.|+++.+++.
T Consensus 294 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~-~~-~i~~vRg~Gl~~~ve~~ 371 (428)
T PRK07986 294 ETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRD-AP-MVADVRVLGAIGVVETT 371 (428)
T ss_pred HHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CC-CEEeEeccceEEEEEeC
Confidence 988653 377899999999999999999999888999999999999999999754 53 67899999999999886
Q ss_pred cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
. ......+.+.|+++|+++.+.+ +.+|+.|++.+|+++|++++++|+++++
T Consensus 372 ~---~~~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 372 R---PVNMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred C---cccHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 4 2345678999999999998874 6999999999999999999999999987
No 29
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.5e-41 Score=305.86 Aligned_cols=268 Identities=40% Similarity=0.737 Sum_probs=240.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++||+++++|||.+..++.+++.+.....+.|..+++..++++|++.+++.++ +++++|++||+++++|.++++++
T Consensus 120 r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~ 196 (389)
T PRK01278 120 RYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDE 196 (389)
T ss_pred CCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHH
Confidence 458999999999999999999887666666667677788899999999999997 47999999999999998899999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|+++|++||++||+||+|+|+++.|..+..+.+++.||++++||++++|+ |+|++++++++++.+....+..+++
T Consensus 197 ~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~ 275 (389)
T PRK01278 197 FLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGGF-PLGACLATEEAAKGMTPGTHGSTYG 275 (389)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCCc-ceEEEEEcHHHHhccCCCCCCCCCC
Confidence 999999999999999999999999999998776677789999999999999998 9999999999999988878888999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
.++++++++.++++.+.++++.++++++.++++++|+.+...+++.+..+++.|.++++.+.. +..++++.|+++
T Consensus 276 ~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~-----~~~~~~~~l~~~ 350 (389)
T PRK01278 276 GNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV-----PNRDLVQALRDE 350 (389)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec-----CHHHHHHHHHHC
Confidence 999999999999999877778899999999999999998766543566788899999987752 467899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
||.+.|.+.+++||+|++.++++++++++++|+++++
T Consensus 351 GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 351 GLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAE 387 (389)
T ss_pred CeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 9999998888999999999999999999999999887
No 30
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=4e-41 Score=310.06 Aligned_cols=277 Identities=30% Similarity=0.490 Sum_probs=240.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhc-CCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~-~~~~~ 62 (306)
|++||.|.++|||.+.+++++++.......+.|..+++..+|+++ ++++|+++.+. +++++
T Consensus 141 r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iA 220 (460)
T PRK06105 141 KKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIA 220 (460)
T ss_pred CcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceE
Confidence 578999999999999999999886666667777777776666653 36788888643 46799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.++++++||++++++|++||+++|+||+++|||+.|..|.++++++.||++++||+++||+.|+|.++
T Consensus 221 avIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~ 300 (460)
T PRK06105 221 AFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVL 300 (460)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEE
Confidence 99999999999999999999999999999999999999999999999999888999999999999999998844999999
Q ss_pred eCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+... .+..|+.+|+++++++.++++.+.++++.+++++++++++++|+++ ..+ +.+..+++.|
T Consensus 301 ~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~-~~v~~vrG~G 378 (460)
T PRK06105 301 MNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADH-PLVGEVRGVG 378 (460)
T ss_pred EcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcC-CCeEEEEecc
Confidence 999998877532 3678999999999999999999999999999999999999999998 666 4788999999
Q ss_pred eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++.+++..+.. ......+...++++|+++.+.+ +.+|++|++.+|++||++++++|.++++ ++.
T Consensus 379 l~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~ 451 (460)
T PRK06105 379 LIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-DTLAFCPPLIITAAQVDEMVDRFGRALD-DVA 451 (460)
T ss_pred eEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCCccCHHHHHHHHHHHHHHHH-HHH
Confidence 999999864210 1123568889999999998864 6999999999999999999999999998 653
No 31
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=6e-41 Score=307.45 Aligned_cols=276 Identities=33% Similarity=0.557 Sum_probs=238.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhc-CCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~-~~~~~ 62 (306)
|++||+|+++|||.+.+++++++....+..|.|..+++..+|++. ++.||++++.+ +++++
T Consensus 138 r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a 217 (442)
T PRK13360 138 RTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIA 217 (442)
T ss_pred CcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 568999999999999999999998777777777777766666542 46888888754 36799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.+.++++||++|+++|++||++||+||+|+|||+.|..+.++++++.||++++||++++|+.|+|.++
T Consensus 218 avivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~ 297 (442)
T PRK13360 218 AVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVF 297 (442)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEEE
Confidence 99999999999999999999999999999999999999999999999999888899999999999999998844999999
Q ss_pred eCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+... .+..||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. ++ .+.++++.|
T Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~-~v~~vrG~G 375 (442)
T PRK13360 298 VSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-AP-HVIDIRNLG 375 (442)
T ss_pred EcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-CC-Ceeeeeccc
Confidence 999999876532 366789999999999999999999888999999999999999998754 53 677899999
Q ss_pred eEEEEEEecCC--ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTA--LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++.+.+.... .......+.+.|+++||++.+.+ +.+||+|++.+|+++|++++++|+++++ ++
T Consensus 376 l~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-~~lr~~Ppl~~t~~eid~~~~~l~~~l~-~~ 441 (442)
T PRK13360 376 LVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-DILALSPPLIIEEAQIDELFDILAQALK-ET 441 (442)
T ss_pred eEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-CEEEEeCCCccCHHHHHHHHHHHHHHHH-Hh
Confidence 99888875421 11235578889999999998764 6899999999999999999999999987 53
No 32
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-41 Score=308.21 Aligned_cols=275 Identities=31% Similarity=0.587 Sum_probs=233.6
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCccccc----CCCH--------HHHHHHHH---h--cCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVD----FGDI--------TALEKIFK---E--SGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~d~--------~~le~~i~---~--~~~~~~~ 63 (306)
+.+||+|.++|||.+.+++++++. ......+.|..+++..+| +++. +.+++.++ + .++++++
T Consensus 143 r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAa 222 (443)
T PRK06058 143 RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAA 222 (443)
T ss_pred CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEE
Confidence 578999999999999999998874 234555666666654333 3231 22222221 1 2367999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
|++||+++.+|.+.++++||++|+++|++||+++|+||+++||+|.|..|.++++++.||+++++|+++||+ |+|++++
T Consensus 223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~-Pi~av~~ 301 (443)
T PRK06058 223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGL-PLSAVTG 301 (443)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCC-ccEEEEE
Confidence 999999999999999999999999999999999999999999999999888888999999999999999998 9999999
Q ss_pred CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
++++++.+....+.+||.+|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|+++.+.+.
T Consensus 302 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~ 380 (443)
T PRK06058 302 RAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDD-RIGDVRGRGAMIAIELV 380 (443)
T ss_pred cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCC-cEEeeeccceEEEEEEe
Confidence 99999998877788999999999999999999998889999999999999999999877763 78899999999999986
Q ss_pred cCC----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 224 KTA----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 224 ~~~----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+. .......+.+.|+++||++.+.+ .++||+.|++.+|+++|++++++|+++++
T Consensus 381 ~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 381 KPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALA 441 (443)
T ss_pred cCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 421 11235568888999999998754 47999999999999999999999999987
No 33
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=308.58 Aligned_cols=277 Identities=30% Similarity=0.541 Sum_probs=236.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--------C---CC-------HHHHHHHHHhc-CCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------F---GD-------ITALEKIFKES-GDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~d-------~~~le~~i~~~-~~~~~ 62 (306)
|++||.|.++|||++.+++++++.+.... ..|..+++..++ + +| ++.+|++++.. +++++
T Consensus 138 r~~ii~~~~~yHG~t~~als~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iA 216 (451)
T PRK06062 138 RPKVLSAYRSYHGGTGSAINLTGDPRRWP-NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIA 216 (451)
T ss_pred CceEEEEeCCCCCCCHHHHhhcCCccccc-CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceE
Confidence 57999999999999999999988543332 234445543322 2 23 67888888754 36799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.+.++++||++|+++|++||++||+||+++||||.|..|.++++++.||+++++|++++|+.|+|.++
T Consensus 217 aviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~ 296 (451)
T PRK06062 217 AILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVA 296 (451)
T ss_pred EEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999966999999
Q ss_pred eCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH-HHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 143 ADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLG-EELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 143 ~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~-~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
+++++++.+... .+..||++|+++++++.++++.+.++++.++.++.+ +++++.|+++...++ .+..+++.|+++.
T Consensus 297 ~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~-~v~~vrG~Gl~~g 375 (451)
T PRK06062 297 ISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHP-SVGEVRGLGVFWA 375 (451)
T ss_pred EcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC-cEEeEeccccEEE
Confidence 999999988643 477799999999999999999999888999999998 699999999887774 7789999999999
Q ss_pred EEEecCCC------h-----hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 220 VEFDKTAL------P-----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 220 i~~~~~~~------~-----~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++..+.. . .....+.+.|+++||++.+. .+.+|++|++.+|++||++++++|+++++ ++.
T Consensus 376 ve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-~~~lrl~ppl~~t~~eid~~~~~l~~~l~-~~~ 447 (451)
T PRK06062 376 LELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-GNRIHVVPPCTVTEDEVREGLAILDAALA-VAD 447 (451)
T ss_pred EEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-Hhh
Confidence 99863210 0 12457889999999998875 56899999999999999999999999998 654
No 34
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=6.1e-41 Score=308.12 Aligned_cols=276 Identities=30% Similarity=0.523 Sum_probs=237.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCH-----------------HHHHHHHHh---cCCcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKE---SGDQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~i~~---~~~~~ 61 (306)
|++||+|.++|||.+.+++++++...++..+.|..+++..+|+++. +.+++.+++ ..+++
T Consensus 128 r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (442)
T TIGR00709 128 RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKP 207 (442)
T ss_pred CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCce
Confidence 5789999999999999999999866666777777777766666542 224444432 23579
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||+++++|.++++++|+++|+++|++||+++|+||+++||||.|..++++++++.||++++||++++|+ |+|++
T Consensus 208 aavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~-Pigav 286 (442)
T TIGR00709 208 AAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGL-PLAVL 286 (442)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCCc-ccEEE
Confidence 99999999999999999999999999999999999999999999999999888888999999999999999998 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
+++++ ++.+....+.+||.+|+++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|+++.++
T Consensus 287 ~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~~ie 364 (442)
T TIGR00709 287 LIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHP-CIGNVRGRGLMQGIM 364 (442)
T ss_pred EEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEE
Confidence 99988 5666555678899999999999999999998888999999999999999999987774 788999999999999
Q ss_pred EecCCC-----------hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 222 FDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 222 ~~~~~~-----------~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.++.. ......+...|+++|+++.+.+ .+.+|+.|++.+|+++++++++++++++. ++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 436 (442)
T TIGR00709 365 IVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVE-EA 436 (442)
T ss_pred EccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 964310 0124568888999999997653 67999999999999999999999999998 65
No 35
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-41 Score=305.55 Aligned_cols=275 Identities=36% Similarity=0.658 Sum_probs=239.1
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC----------HHHHHHHHHh--cCCcEEEEEEcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEP 68 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----------~~~le~~i~~--~~~~~~~v~v~~ 68 (306)
|++||.|+++|||.+.+++++++. ..+...+.|..+++..+++++ ++.+++.+++ +++++++|++||
T Consensus 127 r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Ep 206 (421)
T PRK06777 127 RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEP 206 (421)
T ss_pred CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence 578999999999999999998875 335566677777777777664 6678888874 456899999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+++++|..+++++++++|+++|++||+++|+||+|+||++.|..+++..+++.||++++||++++|+ |+|+++++++++
T Consensus 207 v~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~-pigav~~~~~i~ 285 (421)
T PRK06777 207 IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGM-PISAVVGRAEVM 285 (421)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCC-ceEEEEEcHHHH
Confidence 9999998899999999999999999999999999999999998887888899999999999999999 999999999999
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 227 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~- 227 (306)
+.+....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.++.+.+.....
T Consensus 286 ~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~~~~~~ 364 (421)
T PRK06777 286 DAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCP-AIVDIRARGSMVAVEFNDPQTG 364 (421)
T ss_pred hccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEecCceEEEEEEEecCccC
Confidence 998877788899999999999999999998888999999999999999999977664 778899999999987764210
Q ss_pred ---hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 ---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 ---~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......+.+.++++||++.|++ .+++||+|++..+++++++++++|++++.
T Consensus 365 ~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 365 KPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 1124456777889999998864 47999999999999999999999998875
No 36
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=8.4e-41 Score=308.17 Aligned_cols=276 Identities=28% Similarity=0.505 Sum_probs=237.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh-cCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~-~~~~~~~ 63 (306)
|++||.|+++|||++.+++++++++..+..|.|..+++..+|.++ ++.+++.+.. .++++++
T Consensus 144 r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAa 223 (466)
T PRK07036 144 KKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAA 223 (466)
T ss_pred ccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEE
Confidence 579999999999999999999997777777777666655544433 2445666654 4478999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-cCCCCCcEEEecccccCCcccceeeE
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
|++||+++++|.+.++++|+++|+++|++||+++|+||+++||||.|..+.++ .+++.||+++++|++++|+.|+|.++
T Consensus 224 vi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~ 303 (466)
T PRK07036 224 FIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVI 303 (466)
T ss_pred EEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEE
Confidence 99999999999999999999999999999999999999999999999988777 78999999999999999955999999
Q ss_pred eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+.. ..+++||.+|+++++++.++++.+.++++.+++++++++++++|+++ ..+ +.+..+++.|
T Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~-~~v~~vrG~G 381 (466)
T PRK07036 304 ISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-REL-PLVGDVRGDH 381 (466)
T ss_pred EcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccC-CCEEEEEeec
Confidence 99999988753 24667999999999999999999998899999999999999999987 455 4788999999
Q ss_pred eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++.+++..+.. ......+.+.|+++|+++.+.+ +.+|++|++.+|++||++++++|+++++ ++
T Consensus 382 l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l~Ppl~it~~~id~~~~~l~~al~-~~ 453 (466)
T PRK07036 382 LMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVLSPPLIITRAQIDEIVAILRAAIE-ET 453 (466)
T ss_pred eEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 999999964321 0124568889999999998864 6899999999999999999999999998 65
No 37
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.8e-41 Score=307.40 Aligned_cols=274 Identities=31% Similarity=0.513 Sum_probs=237.9
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC-----------CHHHHHHHHHhcCCcEEEEEEccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPI 69 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~i~~~~~~~~~v~v~~~ 69 (306)
|++||+|.++|||.+.++++++++ ..+...+.|..+.+..+|++ +++.|++.++++++++++|++||+
T Consensus 136 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi 215 (429)
T PRK06173 136 RTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPV 215 (429)
T ss_pred CcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcch
Confidence 578999999999999999998874 33556666666666555553 366788888876678999999997
Q ss_pred -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
++.+|.++++++|+++|+++|++||+++|+||+|+|||+.|..|.++++++.||+++++|+++||+.+++.++.+++++
T Consensus 216 ~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~ 295 (429)
T PRK06173 216 VQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIA 295 (429)
T ss_pred hhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHH
Confidence 9999999999999999999999999999999999999999999888899999999999999999965899999999999
Q ss_pred hhcCC-----CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 149 LCIQP-----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 149 ~~~~~-----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+.+.+ ..++.||.+++++++++.++++.+.++++.++++++.+++++.|+++ ..++ .+..+++.|+++.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~-~v~~vRg~Gl~~~iel~ 373 (429)
T PRK06173 296 QTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFD-SVAEVRVLGAIGVVEMK 373 (429)
T ss_pred HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCC-CeeeeeccceEEEEEeC
Confidence 87753 24677889999999999999999998889999999999999999976 3343 56688999999999997
Q ss_pred cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+ ......+.+.|+++|+++.+.+ +.+|+.|++..+++++++++++|++++. ++.
T Consensus 374 ~---~~~~~~i~~~l~e~Gi~v~~~g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~-~~~ 427 (429)
T PRK06173 374 E---PVNMATLQPRFVEHGIWVRPFG-KLVYIMPPFIISPDELSQLTSGLLRVLK-QEY 427 (429)
T ss_pred C---cccHHHHHHHHHHCCeEEEecC-CEEEEeCCccCCHHHHHHHHHHHHHHHH-HHh
Confidence 4 2345688999999999998875 6999999999999999999999999998 643
No 38
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6e-41 Score=308.14 Aligned_cols=277 Identities=32% Similarity=0.630 Sum_probs=238.6
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC-------------H--------HHHHHHHHh---
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD-------------I--------TALEKIFKE--- 56 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-------------~--------~~le~~i~~--- 56 (306)
|++||.|.++|||++.+++++++. ......+.|..+++..+|+++ . +.+|+.+..
T Consensus 139 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 218 (457)
T PRK05639 139 RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV 218 (457)
T ss_pred CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 578999999999999999988874 345566777777777777763 2 235555432
Q ss_pred cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcc
Q 021893 57 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVI 136 (306)
Q Consensus 57 ~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~ 136 (306)
.++++++|++||++..+|.++++++|+++|+++|++||+++|+||+++|||+.|..|.++++++.||+++++|+++||+
T Consensus 219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~- 297 (457)
T PRK05639 219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGM- 297 (457)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCC-
Confidence 2468999999999999999999999999999999999999999999999999999888899999999999999999998
Q ss_pred cceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 137 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
++|++++++++++ +....+..|+.+|+++++++.++++.+.++++.++.++++++++++|+++...+ +.+.++++.|+
T Consensus 298 pi~av~~~~~i~~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~~~~VrG~Gl 375 (457)
T PRK05639 298 GLSGVIGRKELMD-LTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESF-EVIGDVRGKGL 375 (457)
T ss_pred cceeEEehHHHHh-hcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhC-CCEEeecccee
Confidence 9999999999998 333346678899999999999999999998999999999999999999988777 47889999999
Q ss_pred EEEEEEecCC---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 217 FNAVEFDKTA---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 217 ~~~i~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++.+++..+. .......+.+.|+++|+++.+.+ .+.+|+.|++.+|++|+++++++|+++++ ++.
T Consensus 376 ~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~-~~~ 445 (457)
T PRK05639 376 MIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIK-DAL 445 (457)
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HHH
Confidence 9999885421 11235678999999999998754 57999999999999999999999999998 764
No 39
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-41 Score=307.28 Aligned_cols=277 Identities=29% Similarity=0.518 Sum_probs=238.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHh-cCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~-~~~~~~ 62 (306)
|++||.|.++|||.+.+++++++.+.....|.|..+++..+|+++ ++.+++.++. ++++++
T Consensus 144 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~A 223 (460)
T PRK06541 144 KHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVA 223 (460)
T ss_pred ccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 579999999999999999999987767777778878876665443 3678888875 346799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.+.++++||++|+++|++||+++|+||+|+|||+.|..+.++++++.||++++||++++|+.|+|+++
T Consensus 224 avi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~ 303 (460)
T PRK06541 224 AVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMI 303 (460)
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEE
Confidence 99999999999999999999999999999999999999999999999999888889999999999999999977999999
Q ss_pred eCHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 143 ADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 143 ~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
+++++++.+... .+..|+.+|+++++++.++++.+.++++.+++++++++++++|+++.. + +.+..+++.|+++
T Consensus 304 ~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~-~~v~~vrg~Gl~~ 381 (460)
T PRK06541 304 ASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-L-PIVGDVRGDGYFY 381 (460)
T ss_pred EcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-C-CCeEEEEecceEE
Confidence 999999877532 356789999999999999999998888999999999999999999865 5 3677899999999
Q ss_pred EEEEecCCC------hh-----hHHHHHHHHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 219 AVEFDKTAL------PV-----SAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 219 ~i~~~~~~~------~~-----~~~~~~~~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+++..+.. .. ....+.+.|+++||++.+. +.+.+|++|++.+|++||++++++|++++. ++
T Consensus 382 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~-~~ 456 (460)
T PRK06541 382 GIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLT-EA 456 (460)
T ss_pred EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 999854210 00 1135778999999999874 457899999999999999999999999998 54
No 40
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=6.5e-41 Score=306.34 Aligned_cols=275 Identities=35% Similarity=0.634 Sum_probs=240.9
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC----------CHHHHHHHHHh--cCCcEEEEEEcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG----------DITALEKIFKE--SGDQIAGFLFEP 68 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------d~~~le~~i~~--~~~~~~~v~v~~ 68 (306)
+.+||+|+|+|||++.+++++++. ......+.|..+++..+|++ +++.+++.+++ .++++++|++||
T Consensus 127 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EP 206 (421)
T PRK09792 127 RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEP 206 (421)
T ss_pred CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEcc
Confidence 578999999999999999998874 34566677776777667764 35788888874 236799999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+++++|...++++++++|+++|++||+++|+||+++||++.|..++++.++..||+.++||++++|+ |+|+++++++++
T Consensus 207 vq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~-pigav~~~~~i~ 285 (421)
T PRK09792 207 VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM-PLSGVVGNANIM 285 (421)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCC-ceEEEEEcHHHH
Confidence 9999998888999999999999999999999999999999998888888889999999999999998 999999999999
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 227 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~- 227 (306)
+.+....+..++.+|+++++++.++++.+.++++.++++++.+++++.|+++...+| .+..+++.|+++++++.+...
T Consensus 286 ~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p-~v~~vrG~Gl~~~ie~~~~~~~ 364 (421)
T PRK09792 286 DAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVP-AIAAVRGLGSMIAAEFNDPQTG 364 (421)
T ss_pred hccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCC-CcceecccceEEEEEecCCccC
Confidence 988877788999999999999999999998888999999999999999999987775 677899999999999975311
Q ss_pred ---hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 ---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 ---~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......+.+.++++|+++.+.+ ++.||+.|++.++++++++++++|.+++.
T Consensus 365 ~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 365 EPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 1245678999999999997543 58999999999999999999999999875
No 41
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.1e-40 Score=305.19 Aligned_cols=275 Identities=34% Similarity=0.581 Sum_probs=238.1
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC----------------CHHHHHHHHH--hcCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----------------DITALEKIFK--ESGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------d~~~le~~i~--~~~~~~~ 62 (306)
|.+||.|+++|||.+.++++++++. .....+.|..+++..+|++ +++.+++.+. ..+++++
T Consensus 120 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA 199 (420)
T TIGR00700 120 RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVA 199 (420)
T ss_pred CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEE
Confidence 5789999999999999999988752 3556677777776655553 2567777774 3457899
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||++..+|.+.++++++++|+++|++||+++|+||+|+||++.|..++++.+++.||++++||++++|+ |+|+++
T Consensus 200 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G~-pig~v~ 278 (420)
T TIGR00700 200 ALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADGL-PLSGVT 278 (420)
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCCc-ceEEEE
Confidence 9999999999999999999999999999999999999999999999998887888899999999999999999 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
+++++++.+....+..++.+|+++++++.++++.+.++++.+++++.++++++.|+++...++ .+..+++.|+++++.+
T Consensus 279 ~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~ 357 (420)
T TIGR00700 279 GRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDP-RIGDVRGLGAMIAVEL 357 (420)
T ss_pred ecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-CEEEeeccceEEEEEE
Confidence 999999998877788999999999999999999998888999999999999999999877664 6778899999999988
Q ss_pred ecCC----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 223 DKTA----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 223 ~~~~----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+.. .......+.+.|+++||.+.|++ .+++|++|+...+++++++++++|.++++
T Consensus 358 ~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 358 VDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred ecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 5321 12235677888889999999864 57999999998999999999999998875
No 42
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=5.6e-41 Score=304.11 Aligned_cols=268 Identities=32% Similarity=0.593 Sum_probs=235.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++||+|+++|||.+.+++++++.......+.|..+++...+++|++.+++.+. +++++|++||+++++|.++++++
T Consensus 124 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~ 200 (395)
T PRK03715 124 AYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATRE 200 (395)
T ss_pred CcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHH
Confidence 368999999999999999999987666667777777777788999999999997 57999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
|+++|+++|++||+++|+||+|+|||+.|..+.++++++.||++++||++++|+ ++|.++++++++ .+.+..+.+||.
T Consensus 201 ~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G~-p~~av~~~~~i~-~~~~~~~~~T~~ 278 (395)
T PRK03715 201 FMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGGV-PLAALLAKAEVA-VFEAGDQGGTYN 278 (395)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCCc-ceEEEEEccccc-cccCCCcCCCCC
Confidence 999999999999999999999999999999988899999999999999999998 999999999986 344445778999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+++++++++.++++.+.++++.++++++.++++++|+++...++ +..+++.|+++.+.+.+ .....+.+.+.+.
T Consensus 279 g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~--i~~vrG~Glm~~i~l~~----~~~~~~~~~~~~~ 352 (395)
T PRK03715 279 GNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG--LEGERGEGLLRALLLGK----DIGPQIVEKARDM 352 (395)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC--cCeEEcceeEEEEEecC----chHHHHHHHHHhc
Confidence 99999999999999999888999999999999999999876652 45688999999999874 1233455555555
Q ss_pred ---CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 242 ---GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 242 ---Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|+++.+...+.+|++|++.+|+++|+.++++|+++++ ++
T Consensus 353 ~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~-~~ 394 (395)
T PRK03715 353 QPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLD-KL 394 (395)
T ss_pred cCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 9999876678999999999999999999999999988 54
No 43
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=306.45 Aligned_cols=278 Identities=35% Similarity=0.648 Sum_probs=240.4
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC-----------------CHHHHHHHHHh--cCCcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKE--SGDQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~i~~--~~~~~ 61 (306)
+++||.|+++|||++.++++++++ ..+...+.|..+++..+|++ +++.+++.+++ .++++
T Consensus 129 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 208 (433)
T PRK08117 129 RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEV 208 (433)
T ss_pred CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcE
Confidence 578999999999999999988774 44555566666676666554 56778888874 34679
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||+++++|.+.+++++|++|+++|++||++||+||+|+||++.|..+..+.+++.||+.++||++++|+ |+|++
T Consensus 209 aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~-pigav 287 (433)
T PRK08117 209 AAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASGL-PLSAV 287 (433)
T ss_pred EEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCCC-cceeE
Confidence 99999999999999999999999999999999999999999999999999877778899999999999999998 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++++++++.+....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.+++++
T Consensus 288 ~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~Gl~~gi~ 366 (433)
T PRK08117 288 VASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHP-VIGDVRGIGLMIGIE 366 (433)
T ss_pred EEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-ceeeeecCCcEEEEE
Confidence 9999999988777788899999999999999999998888999999999999999999877764 667899999999999
Q ss_pred EecCC---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 222 FDKTA---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 222 ~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+.+.. .......+.+.|+++||++.+.+ .+++|++|++.+|+++|++++++|.++++ ++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~~ 431 (433)
T PRK08117 367 IVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALT-EYE 431 (433)
T ss_pred EecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HHh
Confidence 86431 12235678899999999987643 47999999999999999999999999998 764
No 44
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=8.8e-41 Score=304.36 Aligned_cols=264 Identities=53% Similarity=0.933 Sum_probs=235.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||++.++|||.+..++++++.+.+...+.|..+++..+|++|++.+++.++ +++++|++||+++++|.+.++++
T Consensus 131 r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~ 207 (396)
T PRK04073 131 KAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEG 207 (396)
T ss_pred CCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHH
Confidence 468999999999999999999987666777888888888999999999999986 57999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-CcccceeeEeCHHHHhhcCCCCccCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTF 160 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (306)
+|++|.++|++||+++|+||+|+|+++.|..+..+..++.||++++||++++ |+ |+|++++++++++.+....+..++
T Consensus 208 ~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~-~ig~~~~~~~i~~~~~~~~~~~t~ 286 (396)
T PRK04073 208 FLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVF-PISCVAANRDILGVFTPGSHGSTF 286 (396)
T ss_pred HHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCC-cceEEEEcHHHHhhhcCCCCCCCC
Confidence 9999999999999999999999999999887766777889999999999995 47 999999999999998776778889
Q ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH
Q 021893 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~ 240 (306)
++++++++++.++++.+.++++.++.+++++++.+.|+++. . +.+..+++.|.++++.++. ...++++.|++
T Consensus 287 ~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~--~-~~i~~~~~~g~~~~~~~~~-----~~~~~~~~l~~ 358 (396)
T PRK04073 287 GGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEID--N-PMIKEVRGRGLFIGVELNE-----PARPYCEALKE 358 (396)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc--C-CcccceecceEEEEEEecc-----hHHHHHHHHHH
Confidence 99999999999999998777888999999999999999863 2 1445678889998888753 35689999999
Q ss_pred CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+||++.+.++++||++|++.++++++++++++|++++
T Consensus 359 ~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 359 EGLLCKETHETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred CCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 9999998777899999999999999999999999876
No 45
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.6e-40 Score=304.84 Aligned_cols=276 Identities=32% Similarity=0.551 Sum_probs=238.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhcC-CcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKESG-DQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~~-~~~~ 62 (306)
+++||+|+++|||.+.+++++++....+..|.|..+++..+|++. .+.+++.++.++ ++++
T Consensus 141 r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iA 220 (445)
T PRK09221 141 RTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIA 220 (445)
T ss_pred CcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 468999999999999999999987777777777777766555542 368888887653 6799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.+.++++||++|+++|++||+++|+||+++|||+.|..+.++++++.||++++||++++|+.|+|.++
T Consensus 221 avi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~ 300 (445)
T PRK09221 221 AVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVI 300 (445)
T ss_pred EEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeE
Confidence 99999999999999999999999999999999999999999999999999888999999999999999998844999999
Q ss_pred eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+.. ..+..||.+|+++++++.++++.+.++++.++++++.+++++.|+++. .++ .+..+++.|
T Consensus 301 ~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~-~~~-~v~~vrg~G 378 (445)
T PRK09221 301 ASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLK-GLP-HVIDIRNIG 378 (445)
T ss_pred EcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCC-CEEEEecCc
Confidence 99999987753 136678999999999999999999888899999999999999999874 343 677899999
Q ss_pred eEEEEEEecCC--ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTA--LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++.+++.... .......+.+.|+++|+++.+. .+.+||+|++.+|+++|++++++|++++. ++
T Consensus 379 l~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-~~~lr~~Ppl~~t~~eid~~~~~l~~~l~-~~ 444 (445)
T PRK09221 379 LVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT-GDTIALSPPLIIEKAQIDELVDALGDALR-AV 444 (445)
T ss_pred eEEEEEEecccccccchHHHHHHHHHHCCeEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence 99998886421 1123457889999999999876 46899999999999999999999999997 54
No 46
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-40 Score=305.12 Aligned_cols=275 Identities=30% Similarity=0.555 Sum_probs=237.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--------CCC--------HHHHHHHHHhcCCcEEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FGD--------ITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d--------~~~le~~i~~~~~~~~~v~ 65 (306)
|.+||+|+++|||.+.+++++++...+...+.|..+++..+| +++ ++.+++.++++ +++++|+
T Consensus 156 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavI 234 (459)
T PRK06082 156 NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFI 234 (459)
T ss_pred CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence 579999999999999999999987767777777777765554 333 35588888754 5799999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCH
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK 145 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~ 145 (306)
+||++++ |.++++++||++|+++|++||++||+||+++||||.|..|.++++++.||+++++|+++||++|+|.+++++
T Consensus 235 vEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~ 313 (459)
T PRK06082 235 AEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKD 313 (459)
T ss_pred ECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcH
Confidence 9999987 467889999999999999999999999999999999999988999999999999999998855999999999
Q ss_pred HHHhhcCCC-CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893 146 EVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 224 (306)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~ 224 (306)
+++..+... .+ .||.+|+++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|+++.+++..
T Consensus 314 ~i~~~~~~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ve~~~ 391 (459)
T PRK06082 314 KYNTAAQISLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYP-LIGDVRGIGLLWGVELVT 391 (459)
T ss_pred HHHhhccCCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeeeccceeEEEEcc
Confidence 987654322 34 789999999999999999998888999999999999999999987774 788999999999999964
Q ss_pred CCC-----hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 225 TAL-----PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 225 ~~~-----~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.. ......+...++++|+++.+.+.+.+|++|++.+|+++|+++++++++++. ++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~-~~ 452 (459)
T PRK06082 392 DRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIA-KI 452 (459)
T ss_pred CccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HH
Confidence 210 112456788899999999887678999999999999999999999999998 76
No 47
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.7e-40 Score=305.28 Aligned_cols=278 Identities=31% Similarity=0.501 Sum_probs=234.7
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh-cCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~-~~~~~~~ 63 (306)
|++||.|.++|||.+.+++++++.......+.+..+++..+++++ ++.|++.+.+ .++++++
T Consensus 143 r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAA 222 (456)
T PRK07480 143 KKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAA 222 (456)
T ss_pred CcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 468999999999999999999886555555555455555444331 3667665543 3468999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
|++||+++.+|.++++++||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.|+|.+++
T Consensus 223 vi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~ 302 (456)
T PRK07480 223 FIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGV 302 (456)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEE
Confidence 99999999999999999999999999999999999999999999999999899999999999999999999669999999
Q ss_pred CHHHHhhcC--C--CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHH-HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 144 DKEVMLCIQ--P--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERS-AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 144 ~~~~~~~~~--~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
++++++.+. . ..+++||++|+++++++.++|+.+.++++.+++ +++++++++.|+++ ..+ +.+..+++.|+++
T Consensus 303 ~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~-~~i~~vrG~Glm~ 380 (456)
T PRK07480 303 GDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADH-PLVGEVRGVGLVG 380 (456)
T ss_pred cHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcC-CCeeeEEeecceE
Confidence 999998873 2 257889999999999999999999998899999 69999999999996 455 4788999999999
Q ss_pred EEEEecCCC------h--hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 219 AVEFDKTAL------P--VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 219 ~i~~~~~~~------~--~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+++..+.. . .....+.+.|+++|+++.+. .+.+|++|++.+|++||++++++|++++. ++.+
T Consensus 381 gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-~~~l~~~Ppl~it~~eid~~~~~l~~al~-~~~~ 451 (456)
T PRK07480 381 AIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-GDRMIISPPLVITHAEIDELVEKARKALD-ATAA 451 (456)
T ss_pred EEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence 999964210 0 01246778899999999875 46899999999999999999999999998 7643
No 48
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=3.1e-40 Score=301.45 Aligned_cols=273 Identities=33% Similarity=0.573 Sum_probs=239.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||+++++|||.+..++++++.......+.|...++..++++|++.+++.+. +++++|++||+++++|.+.++++
T Consensus 129 ~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~ 205 (403)
T PRK05093 129 KTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPE 205 (403)
T ss_pred CCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHH
Confidence 468999999999999998888876655566666666789999999999999996 57999999999999998888999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|+++|++||+++|+||+|+|+++.|..++....++.||+.++||++++|+ |+||+++++++++.+....+..+++
T Consensus 206 ~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~vv~~~~i~~~l~~~~~~~t~~ 284 (403)
T PRK05093 206 FLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PIGAMLTTAEIASHFKVGTHGSTYG 284 (403)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCC
Confidence 999999999999999999999999999988766667788999999999999999 9999999999999988766777888
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
.+++.++++.++++.+..+++.++++++++++++.|+++...++ ....+++.|.++++.+++.. .....+++..|+++
T Consensus 285 ~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~G~~~~~~l~~~~-~~~~~~~~~~l~~~ 362 (403)
T PRK05093 285 GNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYG-VFSEIRGMGLLIGAELKPQY-KGRARDFLNAAAEE 362 (403)
T ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CeEeEeeCceEEEEEecCcc-hhHHHHHHHHHHHC
Confidence 99999999999999987778899999999999999999876552 55678888999999886411 12467899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
||.+.+.+.+++|++|++.+++++|++++++|++++. .+
T Consensus 363 Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~-~~ 401 (403)
T PRK05093 363 GVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVA-KV 401 (403)
T ss_pred CeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 9999987778999999999999999999999999987 53
No 49
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=303.66 Aligned_cols=280 Identities=35% Similarity=0.567 Sum_probs=239.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----------------CCHHHHHHHHHhcC-CcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----------------GDITALEKIFKESG-DQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~d~~~le~~i~~~~-~~~~~ 63 (306)
|++||.|+|+|||++.+++++++.......|.|..+++..++. ++++.+|+.+++++ +++++
T Consensus 123 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAA 202 (447)
T PRK06917 123 KHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAA 202 (447)
T ss_pred CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 5789999999999999999988876566666555544332221 23567888888654 47999
Q ss_pred EEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 64 FLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 64 v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
|++||++.. +|.++++++|+++|+++|++||+++|+||+++||||.|..+.++++++.||+++++|++++|+.|+|.++
T Consensus 203 vi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~ 282 (447)
T PRK06917 203 FIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATV 282 (447)
T ss_pred EEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEE
Confidence 999999985 6788999999999999999999999999999999999999988999999999999999999966999999
Q ss_pred eCHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 143 ADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 143 ~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
+++++++.+... .+++||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|+++
T Consensus 283 ~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~ 361 (447)
T PRK06917 283 VSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQST-IIGDVRGKGLLI 361 (447)
T ss_pred EcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeecceEE
Confidence 999999887542 356799999999999999999999888999999999999999999988774 788999999999
Q ss_pred EEEEecCCC--------hhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 219 AVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 219 ~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+++..+.. ......+.+.|+++|+++.+.+ .+.+|++|++.+|++||+.++++|+++++ ++.+
T Consensus 362 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~~ 440 (447)
T PRK06917 362 GVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVE-EMMQ 440 (447)
T ss_pred EEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-HHHH
Confidence 999853210 1225578899999999998752 56999999999999999999999999998 7633
No 50
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.2e-40 Score=303.77 Aligned_cols=276 Identities=32% Similarity=0.540 Sum_probs=237.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccc--cCCC-----HHHHHHHHHhcCCcEEEEEEcc-ccCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--DFGD-----ITALEKIFKESGDQIAGFLFEP-IQGEA 73 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d-----~~~le~~i~~~~~~~~~v~v~~-~~~~~ 73 (306)
|+|||+|+++|||.+.++++++++......+.|..+++..+ |++| ++.+++.++++++++++|++|| +++.+
T Consensus 134 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~g 213 (423)
T PRK05964 134 RSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAG 213 (423)
T ss_pred CcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCC
Confidence 57999999999999999999998766666666666665444 4456 8899999987767899999999 69999
Q ss_pred CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893 74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP 153 (306)
Q Consensus 74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~ 153 (306)
|.+++++++|++|+++|++||++||+||+|+|+|+.|..+.++.+++.||++++||+++||+.|+|++++++++++.+..
T Consensus 214 G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~ 293 (423)
T PRK05964 214 GMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYS 293 (423)
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhc
Confidence 99999999999999999999999999999999999998887788899999999999999883399999999999988753
Q ss_pred C------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC
Q 021893 154 G------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 227 (306)
Q Consensus 154 ~------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 227 (306)
. .+++||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. ++ .+..+++.|.++.+.+.+...
T Consensus 294 ~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-~~-~i~~vrg~Gl~~~i~l~~~~~ 371 (423)
T PRK05964 294 DDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRD-LP-GVADVRVLGAIGAVELDRPVL 371 (423)
T ss_pred CCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-CC-CeEEeecccEEEEEEeccCcc
Confidence 2 366788899999999999999998888999999999999999998743 43 566788999999998864211
Q ss_pred hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
......+.+.|.++||++.+.+ +.+|++|++.+|++||+.++++|+++++ ++
T Consensus 372 ~~~~~~l~~~l~~~Gv~v~~~~-~~lR~~p~l~~t~edId~~v~~l~~al~-~~ 423 (423)
T PRK05964 372 ERDGPALRAFALERGVLLRPLG-NTIYLMPPYIITAEELDRITDAIVEVAD-EL 423 (423)
T ss_pred hhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHh-hC
Confidence 1135688999999999998864 6899999999999999999999999998 64
No 51
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.2e-40 Score=301.98 Aligned_cols=268 Identities=30% Similarity=0.486 Sum_probs=230.9
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC--------C----HHHHHHHHHhcCCcEEEEEEcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG--------D----ITALEKIFKESGDQIAGFLFEP 68 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------d----~~~le~~i~~~~~~~~~v~v~~ 68 (306)
|+|||+|+++|||.+.++++++++ ......|.|..+++.++|++ | .+.+++.+. +++++|++||
T Consensus 132 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~EP 208 (422)
T PRK05630 132 RTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---ETVAAIIIEP 208 (422)
T ss_pred CcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---hceEEEEEec
Confidence 578999999999999999999884 33556666666665555443 1 234455554 5799999999
Q ss_pred c-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHH
Q 021893 69 I-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 147 (306)
Q Consensus 69 ~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~ 147 (306)
+ ++.+|.++++++++++|+++|++||+++|+||+++|||+.|..++++++++.||+++++|+++||+.++|++++++++
T Consensus 209 i~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i 288 (422)
T PRK05630 209 IVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKV 288 (422)
T ss_pred hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHH
Confidence 6 999999999999999999999999999999999999999999998899999999999999999996589999999999
Q ss_pred HhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 148 MLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 148 ~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++.+.. ..++.||.+|+++++++.++++.+.++++.++++++.+++++.|+.+.. ++ .+.++++.|+++.++
T Consensus 289 ~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~-~v~~vRg~Gl~~~ie 366 (422)
T PRK05630 289 AQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAH-LP-GVADVRVLGAIGVVE 366 (422)
T ss_pred HHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhc-CC-CeeeeeccccEEEEE
Confidence 987753 1467899999999999999999999888999999999999999997643 43 678899999999999
Q ss_pred EecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 222 FDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.. ......+.+.|+++|+++.+.+ +.+|+.|++.+|++++++++++|++++.
T Consensus 367 ~~~---~~~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 367 MEQ---PVDMEEATQAAVDHGVWLRPFG-RLVYVMPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred ECC---cccHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence 964 2235678899999999998874 7999999999999999999999999987
No 52
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1e-39 Score=299.42 Aligned_cols=278 Identities=31% Similarity=0.568 Sum_probs=239.2
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCCC-----------------HHHHHHHHHh--cCCcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~--~~~~~ 61 (306)
|++|+.|.++|||.+.+++++++.. ..+..+.| .+++.++|+++ ++.+++.+++ .++++
T Consensus 127 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 205 (443)
T PRK08360 127 RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV 205 (443)
T ss_pred CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence 5799999999999999999888742 34455555 45566555543 3556677764 24689
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||+++++|.+.++++++++|.++|++||+++|+||+|+||++.|..+++..+++.||++++||++++|+ |+|++
T Consensus 206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~-pigav 284 (443)
T PRK08360 206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGL-PISAT 284 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCc-eeEEE
Confidence 99999999999999998999999999999999999999999999999998777777899999999999999998 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++++++++.+....+..++.+++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|+++.++
T Consensus 285 ~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrg~Gl~~gie 363 (443)
T PRK08360 285 IGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIGVD 363 (443)
T ss_pred EEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEE
Confidence 9999999998876678899999999999999999998888999999999999999999877774 778999999999999
Q ss_pred EecCC-----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 222 FDKTA-----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+.++. .......+.+.|+++|+++.+...+.+|++|++.+|+++|++++++|+++++ ++.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~-~~~~ 429 (443)
T PRK08360 364 LVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIE-DVEE 429 (443)
T ss_pred EecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 86421 1123557889999999999876678999999999999999999999999999 8755
No 53
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-40 Score=284.79 Aligned_cols=273 Identities=33% Similarity=0.565 Sum_probs=241.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
+|||.|+|||||+++++++.+++..+.-++.|..|+++...+||+.+|++.++.|.+.+++||+||++..+|.++.++||
T Consensus 149 t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peF 228 (433)
T KOG1401|consen 149 TKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEF 228 (433)
T ss_pred eeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHH
Confidence 57999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc---cCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH---GST 159 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~---~~~ 159 (306)
|..|+++|+++|++||.||+++||+|.|..++.+.+++.||+.|++|.++||+ |+|...+++++++.+.+..+ +++
T Consensus 229 l~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGl-PigA~~v~~kV~~~i~~~~~l~hg~T 307 (433)
T KOG1401|consen 229 LIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGL-PIGATGVRDKVAEMISPGDHLYHGGT 307 (433)
T ss_pred HHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCc-eeEEEeehHHHHhhcCCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999988755 999
Q ss_pred CCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH
Q 021893 160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 239 (306)
Q Consensus 160 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~ 239 (306)
|.+|++++.++..+++++.+.+..+++.+..+.+++.+.+.....+.......++|+++.+.+.. ....+.+...
T Consensus 308 f~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~-----p~~~~~d~~~ 382 (433)
T KOG1401|consen 308 FSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEG-----PVYKFADAAR 382 (433)
T ss_pred cCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEee-----chhhhhhhhh
Confidence 99999999999999999999999999999999999999999887754455558899998887763 3344555555
Q ss_pred HCCceeccCCC----CEEEEeC--C--CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 240 ERGILAKPTHD----TIVRLTP--P--LSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 240 ~~Gi~~~~~~~----~~lRi~~--~--~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++|.++...+. ..+|+.| . ..+++|.++.+++.+.++++ ++.
T Consensus 383 ~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~-~~~ 432 (433)
T KOG1401|consen 383 EQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLS-ALN 432 (433)
T ss_pred hhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHHHHHHH-Hhc
Confidence 55555554322 2377776 2 23458899999999999988 654
No 54
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-39 Score=297.13 Aligned_cols=273 Identities=36% Similarity=0.714 Sum_probs=234.9
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC------------------HHHHHH-HHHh--cCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD------------------ITALEK-IFKE--SGD 59 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d------------------~~~le~-~i~~--~~~ 59 (306)
|.+||.|.++|||++.+++++++. ......+.|..+++..+++++ ++.+|+ ++++ .++
T Consensus 141 r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 220 (441)
T PRK05769 141 RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPE 220 (441)
T ss_pred CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCC
Confidence 578999999999999999998764 335566777777776666532 234666 3332 346
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccce
Q 021893 60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVS 139 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g 139 (306)
++++|++||+++++|.++++++||++|+++|++||+++|+||+|+|||+.|..++++.+++.||++++||++++|+ |+|
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~-p~g 299 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGL-PLG 299 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCc-ccE
Confidence 8999999999999999999999999999999999999999999999999999888888899999999999999998 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
++++++++++.+ ...+..+|.+++++++++.++++.+.+ ++.++++++.+++++.|+++...++ .+..+++.|+++.
T Consensus 300 av~~~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~ 376 (441)
T PRK05769 300 AVIGRAELMFLP-PGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYE-FIGDVRGLGLMIG 376 (441)
T ss_pred EEEEehhhhhcC-CCCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeecceEEEE
Confidence 999999988543 446788999999999999999999988 8999999999999999999987774 7789999999999
Q ss_pred EEEecCC---ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 220 VEFDKTA---LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 220 i~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.+.... .......+.+.|+++|+++.+.+.+.+|++|+..+|++||+++++++++++.
T Consensus 377 i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 438 (441)
T PRK05769 377 VELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIK 438 (441)
T ss_pred EEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9885421 1123557888999999999887778999999999999999999999999987
No 55
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=290.44 Aligned_cols=255 Identities=37% Similarity=0.696 Sum_probs=228.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
|++||++.++|||.+.+++++++++.+...+.|..+++..+|++|++.+++.+. +++++|++||++..+|.+.++++
T Consensus 107 r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~ 183 (364)
T PRK04013 107 RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEE 183 (364)
T ss_pred CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHH
Confidence 478999999999999999999998878888889989999999999999999997 57999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
||++++++|++||+++|.||+++|+ |.|..+.++++++.||+++++|++++|+ |+|.++.++++ .+..+.+||.
T Consensus 184 yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lggG~-P~~a~~~~~~~----~~~~~~~T~~ 257 (364)
T PRK04013 184 FVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGNGV-PVSLTLTNFDV----ERGKHGSTFG 257 (364)
T ss_pred HHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccccCCc-eeEEEEecccc----cCCCcCCCCC
Confidence 9999999999999999999999999 9999998899999999999999999998 99999988775 2345888999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+|+++++++.++++.+.++++.++.++. ++++.. +.+.++++.|+++.+++.. ....+.+.++++
T Consensus 258 gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~~---~~v~~vRG~Gl~~gve~~~-----~~~~i~~~~~~~ 322 (364)
T PRK04013 258 GNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIKG---ERVVTTRGRGLMIGIVLKK-----PVGKYVEELQNR 322 (364)
T ss_pred cCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhcc---CcceeeeeCcEEEEEEeCC-----cHHHHHHHHHhC
Confidence 9999999999999999998888877654 233311 3678999999999999964 245789999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|+++.+.+.+.+||.|++..+++++++++++|+++++ ++
T Consensus 323 Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~-~~ 361 (364)
T PRK04013 323 GYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIN-DI 361 (364)
T ss_pred CcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-HH
Confidence 9999988778999999999999999999999999998 54
No 56
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.2e-39 Score=294.60 Aligned_cols=269 Identities=39% Similarity=0.646 Sum_probs=238.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++||.++++|||.+..++.+++.......+.+..+++..+|++|++.+++.++ +++++|+++|+++++|.+.++++
T Consensus 128 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~ 204 (398)
T PRK03244 128 RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAG 204 (398)
T ss_pred CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHH
Confidence 468999999999999999988876555566666666788899999999999886 57999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|.++|++||+++|+||+|+|||+.|..+.++..++.||++++||++++|+ |+|++++++++++.+....+..+|.
T Consensus 205 ~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~ 283 (398)
T PRK03244 205 YLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGGL-PIGACLAFGPAADLLTPGLHGSTFG 283 (398)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCCc-ccEEEEEcHHHHhhccCCCCcCCCC
Confidence 999999999999999999999999999998766677889999999999999998 9999999999999888767888899
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
.++++++++.++++.+.++++.++++++++++++.|+++. + +.+..+++.|.++++.++. .....+.+.|+++
T Consensus 284 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~v~g~g~~~~i~~~~----~~~~~~~~~l~~~ 356 (398)
T PRK03244 284 GNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG--H-PLVDHVRGRGLLLGIVLTA----PVAKAVEAAAREA 356 (398)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC--C-CceeeEeeccEEEEEEEec----cHHHHHHHHHHHC
Confidence 9999999999999988887899999999999999998863 3 2455778899999999863 2567899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
|+++.+...+.+|++|+..++++|++.++++|++++. ++.
T Consensus 357 Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~-~~~ 396 (398)
T PRK03244 357 GFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD-AAA 396 (398)
T ss_pred CeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-hcc
Confidence 9999987778999999999999999999999999998 653
No 57
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=5.3e-39 Score=296.39 Aligned_cols=277 Identities=35% Similarity=0.645 Sum_probs=235.9
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh--cCCcE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQI 61 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~--~~~~~ 61 (306)
|++||+|+|+|||++.+++++++. ......+.|..+++..+|+++ ++.+++.+.. .++++
T Consensus 141 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (451)
T PRK06918 141 RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETI 220 (451)
T ss_pred CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCce
Confidence 578999999999999999988874 345566777777776666542 1234554432 34679
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|++||+++.+|.++++++++++|+++|++||+++|+||+|+||++.|..+++..+++.||++++||++++|+ |+||+
T Consensus 221 Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~-pig~v 299 (451)
T PRK06918 221 AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGV-PISGV 299 (451)
T ss_pred EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCC-ccEEE
Confidence 99999999999999999999999999999999999999999999999998777778888999999999999998 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++++++++.+.+..+..++.+++++++++.++++.+.++++.+++++.+++++++|+++...++ .+..+++.|.++.+.
T Consensus 300 ~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~-~~~~vrg~G~~~~~~ 378 (451)
T PRK06918 300 IGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFE 378 (451)
T ss_pred EEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC-CceeeccceeEEEEE
Confidence 9999999998877788899999999999999999998888999999999999999999876663 667788999999887
Q ss_pred EecC-----CChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 222 FDKT-----ALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 222 ~~~~-----~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+..+ +.......+.+.|+++||++.+.+ .+++|++|++.+++++|++++++|++++. ++
T Consensus 379 ~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~-~~ 444 (451)
T PRK06918 379 LVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQ-AC 444 (451)
T ss_pred EccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence 7421 112345678888999999998864 47999999998999999999999999998 65
No 58
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=5.6e-39 Score=295.87 Aligned_cols=277 Identities=29% Similarity=0.495 Sum_probs=233.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh-cCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~-~~~~~~~ 63 (306)
+.+|+.+.++|||.+.+++++++...... +.|..+++..+|++. ++.|++.+.+ .++++++
T Consensus 147 r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaa 225 (460)
T PRK12403 147 KKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAG 225 (460)
T ss_pred CcEEEEECCCcCcccHhhhhcCCCccccc-cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 35688999999999999999998654433 455566665555432 3567666643 3467999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
|++||+++++|.+.++++||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.++|.+++
T Consensus 226 vI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~ 305 (460)
T PRK12403 226 FVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVL 305 (460)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEE
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999669999999
Q ss_pred CHHHHhhcCC----CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 144 DKEVMLCIQP----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 144 ~~~~~~~~~~----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
++++++.+.. ..++.||.+|+++++++.++|+.+.++++.++++ ++.+++++.|+++...++ .+..+++.|+++
T Consensus 306 ~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~ 384 (460)
T PRK12403 306 SKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHP-LVGEVQGAGLVA 384 (460)
T ss_pred CHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCC-CEEeEeecceEE
Confidence 9999887743 1367899999999999999999999888999996 999999999999887774 888999999999
Q ss_pred EEEEecCCC-----h---hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 219 AVEFDKTAL-----P---VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 219 ~i~~~~~~~-----~---~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.+++..+.. . .....+.+.++++|+++.+.+ +.+|++|++..|++|++++++.|+++++ ++.
T Consensus 385 gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-~~~~l~Ppl~it~~eid~~~~~l~~al~-~~~ 454 (460)
T PRK12403 385 ALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-GRMIMAPALVAGRAEIDELVDKTRIAVD-RTA 454 (460)
T ss_pred EEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 999864210 0 112345677799999998753 5799999999999999999999999998 764
No 59
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=8.2e-39 Score=291.98 Aligned_cols=272 Identities=56% Similarity=0.982 Sum_probs=237.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+++|++++++|||.+.+++++++.+.....+.+..+++..+||+|++.||+.+++.++++++|++||+++++|.+.++++
T Consensus 128 ~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~ 207 (401)
T TIGR01885 128 QAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDG 207 (401)
T ss_pred CCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHH
Confidence 46799999999999999999988665656666777778899999999999999876678999999999999999998999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTF 160 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (306)
+|++|+++|++||+++|+||+|+|+|+.|..+..+.+++.||++++||++++| + |+|++++++++++.+....+..++
T Consensus 208 ~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~ 286 (401)
T TIGR01885 208 YLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTY 286 (401)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCC
Confidence 99999999999999999999999999999877666678899999999999966 6 999999999999988765666788
Q ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH
Q 021893 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~ 240 (306)
+++++.++++.++++.+.++++.++.+++.+++++.|+++.. +.+..+++.|.++.+.++.........++++.|.+
T Consensus 287 ~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~---~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~ 363 (401)
T TIGR01885 287 GGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPK---PIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKE 363 (401)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccC---CceeEEeecCeeEEEEeccCcchhHHHHHHHHHHh
Confidence 889999999999999998777889999999999999998742 24556788999999888642111356789999999
Q ss_pred CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+||.+.|..++.+|++|++.+++++|++++++|++++
T Consensus 364 ~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 364 KGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 9999999888899999999999999999999998876
No 60
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=291.24 Aligned_cols=277 Identities=53% Similarity=0.962 Sum_probs=240.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||+++++|||.+..+++.++.......+.|..+++..++++|+++||+.++. +++++|++||+++++|.+.++++
T Consensus 122 ~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~ 199 (400)
T PTZ00125 122 QAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDG 199 (400)
T ss_pred CCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHH
Confidence 3689999999999999999988765455556677777888999999999999972 57999999999999999998999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|.++|++||+++|+||+|+|+++.|..+..+.+++.||++++||++++|+.|+|++++++++++.+....+..++.
T Consensus 200 ~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~ 279 (400)
T PTZ00125 200 YLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYG 279 (400)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCC
Confidence 99999999999999999999999999999876666778899999999999976449999999999999887766777888
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
++++.++++.++++.+.++++.++.+++.+.++++|+++.... +.+..+++.|.++++.++... .....++++.|+++
T Consensus 280 ~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~ 357 (400)
T PTZ00125 280 GNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKS-PWVKEIRGKGLLNAIVFDHSD-GVNAWDLCLKLKEN 357 (400)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEecccEEEEEEEccCc-chHHHHHHHHHHHC
Confidence 8999999999999998877888999999999999999875443 355567788999998886421 24567899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
||.+.|.+.++||++|++.++++++++++++|++++. ++..
T Consensus 358 Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~-~~~~ 398 (400)
T PTZ00125 358 GLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLK-SFDS 398 (400)
T ss_pred CeEEeecCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHhc
Confidence 9999998888999999999999999999999999998 7644
No 61
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=9e-39 Score=289.66 Aligned_cols=266 Identities=37% Similarity=0.676 Sum_probs=235.7
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||++.++|||.+..++++++.......+.|..+++..+|++|++.+++.+. +++++|++||+++++|...++++
T Consensus 112 ~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~ 188 (377)
T PRK02936 112 KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPA 188 (377)
T ss_pred CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHH
Confidence 467999999999999999988886666667778888888999999999999997 57999999999999998888999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|+++|++||+++|+||+|+||++.|..+..+.+++.+|++++||++++|+ |+|++++++++++.+....+..++.
T Consensus 189 ~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~-~ig~v~~~~~~~~~~~~~~~~~t~~ 267 (377)
T PRK02936 189 FLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNGI-PVGAMIGKKELGTAFGPGSHGSTFG 267 (377)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCCC-ccEEEEEcHHHHhhccCCCCCCCCC
Confidence 999999999999999999999999999988766667788899999999999998 9999999999999988766777888
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+++++++++.++++.+..+++.++++++.+++++.|++....++ .+..+++.|.++++.+.+ ....+.+.|.++
T Consensus 268 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~-----~~~~~~~~l~~~ 341 (377)
T PRK02936 268 GNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLE-CVKNIRGKGLMIGIECTE-----EVAPVIEQLREE 341 (377)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-cEEeEeecceEEEEEecc-----hHHHHHHHHHHC
Confidence 99999999999999987677889999999999999998654453 555667888999998874 266789999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
||.+.|.+.+++|++|++.++++++++++++|++++
T Consensus 342 gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 342 GLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 999999877899999999999999999999998764
No 62
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=5.5e-39 Score=293.64 Aligned_cols=265 Identities=23% Similarity=0.379 Sum_probs=220.9
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-------------------CCHHHHHHHHHhcCCcEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------------------GDITALEKIFKESGDQIAG 63 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~~~le~~i~~~~~~~~~ 63 (306)
.+||+|+++|||.+.++++++++....... +..+++..+|+ ++++.++++++++++++++
T Consensus 176 ~~ii~~~~syHG~t~~als~t~~~~~~~~~-~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAA 254 (464)
T TIGR00699 176 LSILSFKGAFHGRLFGSLSTTRSKPIHKLD-IPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAA 254 (464)
T ss_pred CEEEEECCCcCCccHHHHHhcCCccccccC-CCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEE
Confidence 489999999999999999998864333222 11122222222 2467788889876678999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC--CcEEEeccccc-CCccccee
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~--~d~~s~sK~~~-~G~~~~g~ 140 (306)
|++||+++++|.+.++++||++|+++|++||++||+||+++|||+.|..|.++++++. ||+++++|+++ +|+
T Consensus 255 vI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~----- 329 (464)
T TIGR00699 255 IIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY----- 329 (464)
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-----
Confidence 9999999999999999999999999999999999999999999999999889999987 99999999996 676
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFN 218 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~ 218 (306)
+..++ .+.......+.+||.+|+++++++.++++.+.++++.+++++..+++++.|+++...+|..+..++ +.|+++
T Consensus 330 ~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~ 408 (464)
T TIGR00699 330 FFHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFI 408 (464)
T ss_pred cccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEE
Confidence 33332 222223345788999999999999999999999999999999999999999999877744677888 999999
Q ss_pred EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.+++++ ......+.+.|+++|+++.+.+.+.+||.|++.++++||+.++++|.+++
T Consensus 409 gie~~~---~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 409 AWDTPD---EAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred EEecCC---HHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 999863 33467899999999999998777899999999999999999999998764
No 63
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.6e-38 Score=277.06 Aligned_cols=275 Identities=28% Similarity=0.457 Sum_probs=231.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccc--cCCCCCCC-----cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIR--GFGPLLPG-----HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
|+|||.|+|+|||+...++.-.++..... +-.|..|. ++.+||||++++++++++.++++++||+||+..+.|
T Consensus 135 R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g 214 (432)
T COG0001 135 RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMG 214 (432)
T ss_pred CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCC
Confidence 68999999999999999886554321111 12222222 599999999999999999989999999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
.+.|.++||++|+++|++||++||.||+.+|| |.+..-+...+++.||+.+++|.+|||+ |+|.+.+++++|+.+.+.
T Consensus 215 ~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGl-P~ga~gGr~eiM~~~~p~ 292 (432)
T COG0001 215 VVPPEPGFLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAPL 292 (432)
T ss_pred CCCCCHHHHHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCc-ceeeeccHHHHHhhhCCC
Confidence 99999999999999999999999999999998 5554445788999999999999999999 999999999999988764
Q ss_pred ---CccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893 155 ---EHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---- 226 (306)
Q Consensus 155 ---~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---- 226 (306)
.+.+|+++|+++++|..++++.+.+ +...+++.++.+.|++.|++..... +....+...|.++.+.+.+.+
T Consensus 293 g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n~ 371 (432)
T COG0001 293 GPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRNY 371 (432)
T ss_pred CCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCCH
Confidence 6888999999999999999999988 4589999999999999999998876 466788889999888877632
Q ss_pred ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.......+.+.|+++||++.|..-...-+| ..+++++|++.+++++++++ ++.
T Consensus 372 ~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~-~~~ 430 (432)
T COG0001 372 ADAKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFK-ELA 430 (432)
T ss_pred HHHHhhchHHHHHHHHHHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHHH-Hhh
Confidence 111245677799999999999752222244 78999999999999999998 654
No 64
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=3.9e-38 Score=288.15 Aligned_cols=271 Identities=34% Similarity=0.569 Sum_probs=231.2
Q ss_pred cceEEEEecCCCCcccchhcccCCcc-ccccCCCCCCCccccc-----------CCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI 69 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~d~~~le~~i~~~~~~~~~v~v~~~ 69 (306)
+.+||+|.++|||.+.++++++++.. ....+.|..+++...+ ++|++++++++.++++++++|++||+
T Consensus 137 r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv 216 (427)
T TIGR00508 137 RQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPI 216 (427)
T ss_pred ccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEech
Confidence 46899999999999999999988532 3344444444433222 12578888899876678999999997
Q ss_pred -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
++.+|.+++++++|++|+++|++||+++|+||+|+|+|+.|..|..+++++.||++++||+++||+.+++.++.+++++
T Consensus 217 ~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~ 296 (427)
T TIGR00508 217 VQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVA 296 (427)
T ss_pred hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHH
Confidence 8888999999999999999999999999999999999999998888889999999999999999965899999999999
Q ss_pred hhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 149 LCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 149 ~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+.+... .+..||.+|+++++++.++++.+.++++.++++++.++++++|+++.. .+ .+..+++.|.++.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-~~-~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 297 QTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-NP-VVKDVRVLGAIGVVEMY 374 (427)
T ss_pred HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-CC-CEEeEeccccEEEEEEC
Confidence 887642 367788899999999999999998888999999999999999999754 32 45688899999999986
Q ss_pred cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+ ......+.+.|+++||++.+.+ +.+|++|++.+|++||++++++++++++
T Consensus 375 ~---~~~~~~~~~~l~~~Gv~~~~~~-~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 375 K---PVNVEELQKKFVEQGVWIRPFG-KLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred C---ccCHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 4 2346789999999999998764 5899999999999999999999999987
No 65
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-38 Score=290.43 Aligned_cols=271 Identities=29% Similarity=0.468 Sum_probs=221.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCC------ccccc-------------CCCHHHHHHHHHhcCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------HLKVD-------------FGDITALEKIFKESGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------------~~d~~~le~~i~~~~~~~~ 62 (306)
|+|||.|+|+|||.+.+++++++.......+.|..+. ...+| .++++.+++.+.+++++++
T Consensus 148 r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iA 227 (443)
T PRK08297 148 GTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIA 227 (443)
T ss_pred CceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEE
Confidence 4789999999999999999998743222221122110 01111 1245677888887778899
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.++++++||++|+++|++||+++|+||+++|||+.|..+.++++++.||+++++|+++ +|.++
T Consensus 228 avI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-----~~a~l 302 (443)
T PRK08297 228 CFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ-----VCGIM 302 (443)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccccc-----cccee
Confidence 9999999999999999999999999999999999999999999999999988899999999999999985 22233
Q ss_pred eCHHHHhh----cC-CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 143 ADKEVMLC----IQ-PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 143 ~~~~~~~~----~~-~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
..+++.+. +. ...+.+||.+|+++++++.++++.+.++++.++++++.++++++|+++...++.....+++.|++
T Consensus 303 ~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~ 382 (443)
T PRK08297 303 AGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLM 382 (443)
T ss_pred cchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceE
Confidence 44443321 21 23478899999999999999999999889999999999999999999987775333488999999
Q ss_pred EEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+.+.+ ......+++.|+++||++.|.+.+.+|++|++.+++++++.++++|++++. ++
T Consensus 383 ~~i~~~~---~~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~-~~ 442 (443)
T PRK08297 383 CAFDLPT---TADRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALP-EV 442 (443)
T ss_pred EEEEecC---HHHHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence 9999864 334568999999999999988778999999999999999999999999987 54
No 66
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=312.82 Aligned_cols=276 Identities=31% Similarity=0.446 Sum_probs=235.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCC-CCc--------ccccCC--C-------HHHHHHHHH---hcCCc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL-PGH--------LKVDFG--D-------ITALEKIFK---ESGDQ 60 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~--d-------~~~le~~i~---~~~~~ 60 (306)
|++||+|.++|||.|.+++++++.. +...+.+.. +.+ ...|++ + .+.+++.++ .++++
T Consensus 706 r~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 784 (1013)
T PRK06148 706 QRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRG 784 (1013)
T ss_pred CCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCc
Confidence 5789999999999999999988743 333333332 222 233454 2 145666665 23467
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEEEecccccCCcccce
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVS 139 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~g 139 (306)
+++|++||+++.+|.++++++||++++++|++||+++|+||+++||||.|. .|.++++++.||+++++|+++||+ |+|
T Consensus 785 iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~-Plg 863 (1013)
T PRK06148 785 PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMG 863 (1013)
T ss_pred eEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCc-ceE
Confidence 999999999999999999999999999999999999999999999999996 788899999999999999999998 999
Q ss_pred eeEeCHHHHhhcCCC-CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 140 AVLADKEVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
.+++++++++.+.+. .+.+||.+|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|+++
T Consensus 864 av~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Gl~~ 942 (1013)
T PRK06148 864 AVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFD-IIGDVRGMGLFL 942 (1013)
T ss_pred EEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CceEEeeeceEE
Confidence 999999999988754 377899999999999999999999999999999999999999999988874 788999999999
Q ss_pred EEEEecCC-----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 219 AVEFDKTA-----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 219 ~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+++..+. .......+.+.|+++||++.+.+ .+.+||.|++.+|++++++++++|++++. ++
T Consensus 943 gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~-~~ 1011 (1013)
T PRK06148 943 GIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLA-AA 1011 (1013)
T ss_pred EEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 99986422 11235578899999999998754 48999999999999999999999999998 64
No 67
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.1e-38 Score=286.90 Aligned_cols=271 Identities=27% Similarity=0.439 Sum_probs=227.3
Q ss_pred cceEEEEecCCCCcccchhcccCCcccc------ccCC-CCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAI------RGFG-PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
|++||.|+++|||++.++++.++..... ..+. +..+++..+|++|++.+++.++++++++++|++||+++++|
T Consensus 135 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G 214 (428)
T PRK12389 135 RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFG 214 (428)
T ss_pred CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCC
Confidence 5799999999999999999887743221 1111 22356788999999999999988777899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP- 153 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~- 153 (306)
.+.++++||++|+++|++||+++|+||+++|| |.+..+..+++++.||+++++|+++||+ |+|.+++++++++.+.+
T Consensus 215 ~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG~-Pi~av~~~~~i~~~~~~~ 292 (428)
T PRK12389 215 IVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGGL-PIGAYGGRKDIMEQVAPL 292 (428)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCCC-ceeEEeEHHHHHhhhccC
Confidence 99999999999999999999999999999999 8877666778899999999999999998 99999999999998853
Q ss_pred --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCC---
Q 021893 154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTAL--- 227 (306)
Q Consensus 154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~--- 227 (306)
..+.+||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+ ++.| ++.+.+..+..
T Consensus 293 ~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~v~r~~g-~~gi~~~~~~~~~~ 370 (428)
T PRK12389 293 GPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHG-ITITINRLKG-ALTVYFTDEKVTNY 370 (428)
T ss_pred CCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCc-EEEEEEeCCCCCCh
Confidence 3577899999999999999999999888999999999999999999877664 44555 5666 66677653210
Q ss_pred -------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 -------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 -------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......+.+.|+++||++.+.+.+.+ .|++.++++||++++++++++++
T Consensus 371 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~--~~~l~~t~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 371 DQAERSDGEAFGKFFKLMLNQGINLAPSKYEAW--FLTTAHTEEDIEETLEAVDRAFA 426 (428)
T ss_pred hhhcccCHHHHHHHHHHHHHCCcEeecCCCCCe--eecCCCCHHHHHHHHHHHHHHHH
Confidence 11245788999999999988644443 46799999999999999999987
No 68
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=7.5e-38 Score=301.21 Aligned_cols=274 Identities=24% Similarity=0.367 Sum_probs=222.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccC-CCCCC-Cccc----------------ccCC--C---------------
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGF-GPLLP-GHLK----------------VDFG--D--------------- 46 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~-~~~~~-~~~~----------------~~~~--d--------------- 46 (306)
|.|||.+.|+|||.|+++++++++..+...+ .|++. ...+ +|++ +
T Consensus 472 r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 551 (817)
T PLN02974 472 ELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEV 551 (817)
T ss_pred CCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccccccc
Confidence 5789999999999999999999876665544 34321 1111 1111 0
Q ss_pred --------------HHHHHHHHHh-----cCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc
Q 021893 47 --------------ITALEKIFKE-----SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106 (306)
Q Consensus 47 --------------~~~le~~i~~-----~~~~~~~v~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~ 106 (306)
.+.+++.|++ .++++++|++||+ ++.+|+++++++|+++|+++|++||++||+||+++||
T Consensus 552 f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGf 631 (817)
T PLN02974 552 FDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGL 631 (817)
T ss_pred ccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCC
Confidence 2557777763 3467999999995 8999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhc
Q 021893 107 ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDE 180 (306)
Q Consensus 107 ~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~ 180 (306)
||.|..|+++++++.||+++++|+++||+.|+|.+++++++++.+.. ..|++||++|+++++++.++++.+.++
T Consensus 632 GRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~ 711 (817)
T PLN02974 632 WRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDP 711 (817)
T ss_pred CcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999996699999999999998852 248899999999999999999999887
Q ss_pred cHHH----HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-----hhhHHHHHHHHH-HCCceeccCCC
Q 021893 181 KLAE----RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMK-ERGILAKPTHD 250 (306)
Q Consensus 181 ~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-----~~~~~~~~~~l~-~~Gi~~~~~~~ 250 (306)
++.+ +.+++.+++.+.|.+....+ +.+.++++.|+++.+++..+.. ...+..+.+.++ ++|+++++.+
T Consensus 712 ~~~~~l~~~~~~l~~~l~~~l~~~l~~~-p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G- 789 (817)
T PLN02974 712 STNPNLIPPGSRLRELWDEELVRAISSL-PNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG- 789 (817)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-
Confidence 5444 44555555566663333445 4889999999999999975321 112456788888 9999999874
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+.+++.|+..+++++++++++.|.+.|
T Consensus 790 nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 790 NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 799999999999999999999998876
No 69
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.1e-37 Score=284.88 Aligned_cols=268 Identities=49% Similarity=0.824 Sum_probs=234.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||++.++|||.+.++++++.++.....+.|..+++.++||+|++.+|+.+. +++++|+++++++++|.+.+++++
T Consensus 133 ~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~ 209 (401)
T PRK00854 133 AEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGY 209 (401)
T ss_pred ceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHH
Confidence 58999999999999998888877666666777888889999999999999997 579999999999999999988999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
|++|+++|++||+++|+||+|+|+++.|..+..+..++.+|++++||++++|+.|+|++++++++++.+....+..+++.
T Consensus 210 l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~ 289 (401)
T PRK00854 210 FTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGG 289 (401)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCc
Confidence 99999999999999999999999998887665566788899999999999774499999999999998876667778888
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
+++.++++.++++.+.+++..++++++++++++.|+++... .+..+++.|.++.+.+... .....++++.|+++|
T Consensus 290 ~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~g~g~~~~i~~~~~--~~~~~~~~~~L~~~G 364 (401)
T PRK00854 290 NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSN---IVREVRGRGLMLAVELEPE--AGGARQYCEALKERG 364 (401)
T ss_pred CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccC---ceEEEeccceEEEEEEecC--chhHHHHHHHHHHCC
Confidence 99999999999999887778899999999999999987422 3345678898888877532 235678999999999
Q ss_pred ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|.+.+.+.+++|++|++.+++++|++++++|++++.
T Consensus 365 V~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 365 LLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred eEEecCCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 999887778999999999999999999999998764
No 70
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-37 Score=283.21 Aligned_cols=268 Identities=44% Similarity=0.758 Sum_probs=236.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|+++.++|||.+..++..++.......+.|..+++..++++|++++++.+. +++++|+++|+++++|..++++++
T Consensus 128 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~ 204 (396)
T PRK02627 128 PEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEY 204 (396)
T ss_pred CeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHH
Confidence 68999999999999999988876655556666667778889999999999995 579999999999999988889999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
+++|.++|++||++||+||+|+||++.|..++++..++.+|++++||++++|+ |+||+++++++++.+....+..+++.
T Consensus 205 l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G~-rig~~~~~~~~~~~~~~~~~~~t~~~ 283 (396)
T PRK02627 205 LQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGGV-PIGAVLAKEKVADVFTPGDHGSTFGG 283 (396)
T ss_pred HHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhhCCc-ccEEEEEcHHHHhccCCCCCCCCCCC
Confidence 99999999999999999999999998887666667788999999999999999 99999999999998887667788999
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
++++++++.++++.+..+++.++++++.+.+++.|+++...++ .+..+++.|.++++.+. .+..++++.|+++|
T Consensus 284 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~-----~~~~~~~~~l~~~G 357 (396)
T PRK02627 284 NPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYP-GIKEVRGLGLMIGIELD-----RPAAEIVKKALEKG 357 (396)
T ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeccCcEEEEEEec-----CcHHHHHHHHHHCC
Confidence 9999999999999888778899999999999999998876653 55567778999999873 24678999999999
Q ss_pred ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|.+.|.+.+++|++|++..+++++++++++|+++++ ++
T Consensus 358 v~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~-~~ 395 (396)
T PRK02627 358 LLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLK-EL 395 (396)
T ss_pred eEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHH-hh
Confidence 999998778999999989999999999999999987 54
No 71
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=266.07 Aligned_cols=269 Identities=32% Similarity=0.517 Sum_probs=230.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHh-cCCcEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIAG 63 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~-~~~~~~~ 63 (306)
.+||.+.++|||.+..++++++....+.++.-..+++.....+| .++||..+.. -+.++++
T Consensus 136 ~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAa 215 (442)
T KOG1404|consen 136 LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAA 215 (442)
T ss_pred ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeE
Confidence 58999999999999999999996555544422223432222222 2455555553 2356999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
+++|++++.+|.+.+++.+|+++.++|+++|.++|.||+|+||||.|..|.++..++.||++|++|++|+|+ ++|.++.
T Consensus 216 fiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~-Pl~AVvt 294 (442)
T KOG1404|consen 216 FIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGF-PLGAVVT 294 (442)
T ss_pred EEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCC-cceeeec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred CHHHHhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 144 DKEVMLCIQPGE-HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 144 ~~~~~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
++++++.+.+.. +..||.+|+++++++.++++.+++++++++....+.+|++.|.++...+| .+-++|+.|+|+.+++
T Consensus 295 t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~-iIGdVRG~GLm~GvE~ 373 (442)
T KOG1404|consen 295 TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHP-IIGDVRGRGLMLGVEL 373 (442)
T ss_pred CHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCC-ceeecccceeEEEEEE
Confidence 999999987765 88999999999999999999999999999999999999999999999884 8999999999999998
Q ss_pred ecCC------ChhhHHHHHHHHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 223 DKTA------LPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 223 ~~~~------~~~~~~~~~~~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
-++. .......+.+.|.++|+.+.-+ ..+.+||+|+.+.|++|++.+++..
T Consensus 374 V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 374 VSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 8654 1123456889999999999765 3669999999999999998777755
No 72
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.8e-37 Score=278.56 Aligned_cols=272 Identities=26% Similarity=0.432 Sum_probs=224.0
Q ss_pred cceEEEEecCCCCcc---cchhcccCCcc--ccccC--CCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRT---LAAISMSCDNE--AIRGF--GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~---~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
|++||.|.++|||++ .++++.++... ....+ .+.++.+..++|+|++.+++.++++++++++|++||++++.|
T Consensus 136 r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G 215 (433)
T PRK00615 136 RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMG 215 (433)
T ss_pred CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCC
Confidence 579999999999988 66666665321 11222 223344577899999999999987667899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
.+.++++|+++|+++|++||+++|+||+|+|| |.|..+..+++++.||++++||+++||+ ++|++++++++++.+.+.
T Consensus 216 ~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG~-p~~av~~~~~i~~~~~~~ 293 (433)
T PRK00615 216 VVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGGL-PAAAVVAHKSIMDHLAPE 293 (433)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCCc-ceeeeeecHHHHhhhcCC
Confidence 99999999999999999999999999999999 8888777888999999999999999998 999999999999988532
Q ss_pred ---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC----
Q 021893 155 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---- 227 (306)
Q Consensus 155 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~---- 227 (306)
.+.+|+.++++++++++++++.+.++++.++++++.++++++|+++....+-.+..++ .|+++.+.+..++.
T Consensus 294 ~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~ 372 (433)
T PRK00615 294 GTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLA 372 (433)
T ss_pred CCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChH
Confidence 3667888999999999999999988889999999999999999998665321245556 89999999975320
Q ss_pred ------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 ------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 ------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......+.+.|+++||++.+...+.. .++..+|++||++++++++++++
T Consensus 373 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~--~ls~~ht~~did~~~~a~~~~~~ 427 (433)
T PRK00615 373 EAQLSDIEAFQTFYQSAFSKGVYLSPSPFEAS--FLSSAHSMENLDYAQNVLIDSLE 427 (433)
T ss_pred HHhhCCHHHHHHHHHHHHHCCeeecCcccccc--ceecCCCHHHHHHHHHHHHHHHH
Confidence 11244789999999999987643322 33477899999999999999998
No 73
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-37 Score=303.93 Aligned_cols=275 Identities=30% Similarity=0.526 Sum_probs=228.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccc-cccCCCCC--------CCcccccC--CC-----HHHHHHHHH---hcCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEA-IRGFGPLL--------PGHLKVDF--GD-----ITALEKIFK---ESGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~--~d-----~~~le~~i~---~~~~~~~ 62 (306)
+++||++.++|||++.+++++++.... ...+.+.. +.....++ ++ .+.+++.++ +++++++
T Consensus 667 r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iA 746 (972)
T PRK06149 667 RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLA 746 (972)
T ss_pred CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceE
Confidence 578999999999999998877653211 11111111 12222233 22 345555554 2456899
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEEEecccccCCcccceee
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
+|++||+++++|.+.++++||++|+++|++||+++|+||+|+|||+.|. .+.++++++.||+++++|++++|+ ++|++
T Consensus 747 avI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~-Pl~av 825 (972)
T PRK06149 747 GFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGH-PLGAV 825 (972)
T ss_pred EEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCe-eeEEE
Confidence 9999999999999999999999999999999999999999999999997 567888999999999999999998 99999
Q ss_pred EeCHHHHhhcCC-CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 142 LADKEVMLCIQP-GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
++++++++.+.. ..+.+++.+|+++++++.++++.+.++++.++.++.+++++++|+++..+++ .+..+++.|+++.+
T Consensus 826 ~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Gl~~gv 904 (972)
T PRK06149 826 ITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHP-LIGAVHGMGLYLGV 904 (972)
T ss_pred EEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeecceEEEE
Confidence 999999988864 3345678899999999999999999999999999999999999999988774 88899999999999
Q ss_pred EEecCC-----ChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 221 EFDKTA-----LPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 221 ~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++..+. .......+++.|+++||++.+.+. +.+||.|++.++++++++++++|++++.
T Consensus 905 el~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~ 969 (972)
T PRK06149 905 ELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLT 969 (972)
T ss_pred EEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 986321 122356789999999999998753 7899999999999999999999999987
No 74
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=7.9e-37 Score=280.05 Aligned_cols=267 Identities=27% Similarity=0.441 Sum_probs=217.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCC------cccccC-------------CCHHHHHHHHHhcCCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------HLKVDF-------------GDITALEKIFKESGDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-------------~d~~~le~~i~~~~~~~~ 62 (306)
+++||.|+++|||.+.+++++++.......+.|..+. ...+|+ ++++++++.+.+++++++
T Consensus 141 ~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iA 220 (431)
T TIGR03251 141 GTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIA 220 (431)
T ss_pred CceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEE
Confidence 4789999999999999999998854344433333211 011121 245667778877778899
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++++|.++++++||++|+++|++||++||+||+|+|||+.|..|.++++++.||+++++|++. ..|++.
T Consensus 221 avivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~~----~~g~~~ 296 (431)
T TIGR03251 221 CFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ----VCGIMA 296 (431)
T ss_pred EEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccCc----cceEEe
Confidence 9999999999999999999999999999999999999999999999999988899999999999999973 122344
Q ss_pred eCH--HHHhh-cC-CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 143 ADK--EVMLC-IQ-PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 143 ~~~--~~~~~-~~-~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
..+ +++.. +. ...+..||++|+++++++.++++.+.++++.++++++.++++++|+++...+++.+..+++.|.++
T Consensus 297 ~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~ 376 (431)
T TIGR03251 297 GRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMC 376 (431)
T ss_pred cchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeE
Confidence 332 22321 21 234678899999999999999999988889999999999999999998777644777889999999
Q ss_pred EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.+.++. ......+.+.|+++||++.+.+.+.+|++|++.++++||++++++|++
T Consensus 377 ~i~~~~---~~~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 377 AFDLPS---TADRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEEeCC---HHHHHHHHHHHHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 999864 334567999999999999987778899999999999999999999875
No 75
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=1.1e-36 Score=280.03 Aligned_cols=272 Identities=23% Similarity=0.354 Sum_probs=216.7
Q ss_pred cceEEEEecCCCCcccchhcc--cCCccccccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISM--SCDNEAIRGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
|+|||.|+|+|||++....+. ++......+..+.. +.+..+||||++.|++.++++++++++|++||+++++|
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G 260 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSG 260 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCC
Confidence 579999999999977543333 22111111112222 24577899999999999988777899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP- 153 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~- 153 (306)
.+.++++||++|+++|++||++||+||+++|| +.|..+..+++++.||+++++|+++||+ |+|.+++++++++.+.+
T Consensus 261 ~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG~-Pigav~g~~ei~~~~~~~ 338 (474)
T PLN02482 261 FIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGGL-PVGAYGGRREIMEMVAPA 338 (474)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCCC-ceEEEEEcHHHHHhhccC
Confidence 99999999999999999999999999999999 8888777788999999999999999998 99999999999998863
Q ss_pred --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893 154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----- 226 (306)
Q Consensus 154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----- 226 (306)
..+.+||.+|+++++++.++|+.+.++++.++++++.++++++|+++....+ ........+.++.+.+..++
T Consensus 339 ~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g-~~~~~~~v~g~~gi~f~~~~~~~~~ 417 (474)
T PLN02482 339 GPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAG-HEMCGGYISGMFGFFFTEGPVYNFA 417 (474)
T ss_pred CCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEcccceEEEEEEecCCccChh
Confidence 3467889999999999999999998888999999999999999999876642 11111222335555554321
Q ss_pred -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.......+.+.|+++||++.+.+... + .|++.+|++||+++++++++++.
T Consensus 418 ~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~-~psl~ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 418 DAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G-FTSLAHTEEDIDFTIAAAERVLA 472 (474)
T ss_pred hhccCCHHHHHHHHHHHHHCCeEEeccCCCC-C-cCCCCCCHHHHHHHHHHHHHHHH
Confidence 11224578899999999998853322 1 37899999999999999999987
No 76
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-36 Score=274.91 Aligned_cols=266 Identities=31% Similarity=0.562 Sum_probs=231.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||++.++|||.+..+++.++.......+.+..+.+...+++|++.+++.++ +++++|+++|+++++|.+.++++
T Consensus 110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~---~~~a~vi~e~v~~~~G~~~~~~~ 186 (375)
T PRK04260 110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN---KNTAAVMLELVQGESGVLPADKD 186 (375)
T ss_pred CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC---CCeEEEEECCeECCCCCcCCCHH
Confidence 468999999999999999888875544455555545555567899999999886 47899999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
+|+++.++|+++|+++|+||+|+|+++.|..+.+...++.||++||||++++|+ |+|++++++++++.+....+..++.
T Consensus 187 ~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~ 265 (375)
T PRK04260 187 FVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANGV-PVGAMLAKSSLGGAFGYGSHGSTFG 265 (375)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCC
Confidence 999999999999999999999999998887666667788999999999999998 9999999999999887766778899
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
++++.++++.++++.+..+++.+++++..+.+++.+.+.....+ .+..+++.|.++++.+.. +..++.+.|+++
T Consensus 266 ~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~ 339 (375)
T PRK04260 266 GNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKE-TVTTVRGLGYMIGIETTA-----DLSQLVEAARDK 339 (375)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCC-CeeEEeccceEEEEEecC-----cHHHHHHHHHhC
Confidence 99999999999999998778899999999999999998876653 455777899999998842 456899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
||.+.+.+.+.+|++|+..++++++++++++|++++
T Consensus 340 Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 340 GLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 999998877899999999999999999999998753
No 77
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=1.8e-36 Score=277.98 Aligned_cols=274 Identities=47% Similarity=0.811 Sum_probs=237.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----------CHHHHHHHHHhcCCcEEEEEEcccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPIQ 70 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~i~~~~~~~~~v~v~~~~ 70 (306)
+.+||++.++|||.+..++..++...+...+.+....+..+|++ |++.|++.++++++++++++++|++
T Consensus 122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~ 201 (413)
T cd00610 122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQ 201 (413)
T ss_pred CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcccc
Confidence 47899999999999999998887655556666666677889998 8999999998765689999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh
Q 021893 71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 150 (306)
Q Consensus 71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~ 150 (306)
+++|.+.++++++++|.++|++||+++|+||+|+|+++.|..+..+.+++.+|+.++||++++|+ |+|++++++++++.
T Consensus 202 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~-~~g~~~~~~~~~~~ 280 (413)
T cd00610 202 GEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGL-PLGAVLGREEIMDA 280 (413)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCcc-ccEEEEEcHHHHHh
Confidence 99999888999999999999999999999999999988887766777888999999999999998 99999999999998
Q ss_pred c--CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--
Q 021893 151 I--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-- 226 (306)
Q Consensus 151 ~--~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-- 226 (306)
+ ....+..+++.++++++++.++++.+.++++.++++++.+++++.|+++.... +.+..+++.|.++++.+.+..
T Consensus 281 ~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~ 359 (413)
T cd00610 281 FPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKH-PLVGDVRGRGLMIGIELVKDRAT 359 (413)
T ss_pred hccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-CcEEEeecCceEEEEEEecCCCc
Confidence 6 45566778889999999999999999887889999999999999999987643 245566788999999887521
Q ss_pred ---ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 227 ---LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 227 ---~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.......+++.|+++||.+.|.+.+.+|++++..++++++++++++|++++
T Consensus 360 ~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 360 KPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred CCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 013567899999999999999877899999999999999999999998764
No 78
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=2.9e-36 Score=276.66 Aligned_cols=275 Identities=29% Similarity=0.570 Sum_probs=233.8
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccC----CC------HHHHHHHHHh--cCCcEEEEEEcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDF----GD------ITALEKIFKE--SGDQIAGFLFEP 68 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~d------~~~le~~i~~--~~~~~~~v~v~~ 68 (306)
+.+||+|+++|||.+.+++++++.. .+...+.+..+++...++ ++ ++.|++++++ .++++++|++||
T Consensus 128 r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 128 RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 5689999999999999999888742 244455555555433332 21 5678988862 346799999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+++++|.+.++++++++|.++|++||+++|+||+|+|+++.|..++++..++.+|+.+|||++++|+ |+||++++++++
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~v~~~~~~~ 286 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVM 286 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCC-cceeeEecHHHH
Confidence 9999999999999999999999999999999999999999888776777788999999999999998 999999999999
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-- 226 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-- 226 (306)
+.+....+..++.++++.++++.+.++.+..+++.+++++..+++++.|.++...+| .+..+++.|+++|+.+.++.
T Consensus 287 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~v~g~G~~~~l~l~~~~~~ 365 (425)
T PRK08088 287 DAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDH 365 (425)
T ss_pred hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeccceEEEEEEecCCCC
Confidence 999887888899999999999999999998888999999999999999999887774 56778888999999985321
Q ss_pred ---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 227 ---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 227 ---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.......+.+.|+++||.+.+.. .+.+|++|+..+++++|++++++|++++.
T Consensus 366 ~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~ 422 (425)
T PRK08088 366 SKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFD 422 (425)
T ss_pred CCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH
Confidence 12346789999999999887653 48999999999999999999999999987
No 79
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1.1e-36 Score=270.77 Aligned_cols=220 Identities=47% Similarity=0.843 Sum_probs=201.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHH----------HHHHHH-hcCCcEEEEEEcccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA----------LEKIFK-ESGDQIAGFLFEPIQ 70 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----------le~~i~-~~~~~~~~v~v~~~~ 70 (306)
|++||.|+++|||.+.+++++++++.++..+.|..+++..+|++++.. +++.+. .+++++++|++||++
T Consensus 108 r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~ 187 (339)
T PF00202_consen 108 RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQ 187 (339)
T ss_dssp TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSB
T ss_pred CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccc
Confidence 589999999999999999999999899999999999999999999877 444444 234789999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh
Q 021893 71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 150 (306)
Q Consensus 71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~ 150 (306)
+.+|.+.++++|+++|+++|++||+++|+||+++||||.|..|.++++++.||+++++|++++|+ ++|.+++++++++.
T Consensus 188 g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG~-p~sav~~~~~i~~~ 266 (339)
T PF00202_consen 188 GEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGGL-PISAVLGSEEIMEA 266 (339)
T ss_dssp TTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTTS-SEEEEEEEHHHHTT
T ss_pred cccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccccchhhhh-hcccccccchhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999997 99999999999999
Q ss_pred cCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 151 IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+.+..+.+||.+++++++++.++++.+.++++.+++++..++++++|+++...+ +.+..+++.|+++.+++.
T Consensus 267 ~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 267 FQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARY-PLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp SCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEETTEEEEEES
T ss_pred ccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEeeeCeEEEEEEE
Confidence 988889999999999999999999999999999999999999999999999988 589999999999999875
No 80
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.2e-35 Score=273.05 Aligned_cols=272 Identities=26% Similarity=0.457 Sum_probs=223.3
Q ss_pred cceEEEEecCCCCcccchhcccCCc--cccccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN--EAIRGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+++||.++++|||.+..+++.++.. .....+.|.. +.+..+|++|++++++.++++++++++|++||+++++|
T Consensus 130 r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G 209 (423)
T TIGR00713 130 RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMG 209 (423)
T ss_pred CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCC
Confidence 5799999999999987777655431 1111222221 23567888999999999987666899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP- 153 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~- 153 (306)
.+.++++++++|+++|++||+++|+||+|+|+ +.|..+..+.+++.||++++||++++|+ |+|++++++++++.+..
T Consensus 210 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G~-pig~v~~~~~i~~~~~~~ 287 (423)
T TIGR00713 210 VVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGGL-PVGAFGGRREIMERLAPE 287 (423)
T ss_pred CcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCCC-ceeeeeEHHHHHHhhCcC
Confidence 88888999999999999999999999999999 7776555667788999999999999998 99999999999998864
Q ss_pred --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC----
Q 021893 154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---- 227 (306)
Q Consensus 154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~---- 227 (306)
..+..++.+++++++++.++++.+.++++.+++++..+++++.|+++...+ +....+++.|.++.+.+.....
T Consensus 288 ~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~~~ 366 (423)
T TIGR00713 288 GPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTNYA 366 (423)
T ss_pred CCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCChh
Confidence 346678899999999999999999887789999999999999999887766 3666778899999887763210
Q ss_pred ------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 ------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 ------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......+++.|+++||++.+.+.+.+|++|+ ++++++++++++|++++.
T Consensus 367 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 367 DAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred hhhcccHHHHHHHHHHHHHCCeEEecCCccceeeECC--CCHHHHHHHHHHHHHHHh
Confidence 1123468889999999998765567899865 799999999999999987
No 81
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=2.3e-35 Score=270.98 Aligned_cols=270 Identities=24% Similarity=0.360 Sum_probs=218.2
Q ss_pred cceEEEEecCCCCcccchhccc--CCccccccCCCC----CCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMS--CDNEAIRGFGPL----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGV 75 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~ 75 (306)
|++||.|+|+|||++..++... ++......+.+. ...+..+||||++.+++.+.. +++++|++||+++++|.
T Consensus 156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~--~~vAavi~EPi~g~~G~ 233 (453)
T PRK07046 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALAD--GDVAAVLAEPAMTNIGM 233 (453)
T ss_pred CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCC--CCeEEEEECCCCCCCCC
Confidence 5799999999999976665432 211111222111 234588899999999999953 67999999999999999
Q ss_pred ccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC--
Q 021893 76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-- 153 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-- 153 (306)
+.++++||++++++|++||+++|+||+++ | +.|..-....+++.||+++++|+++||+ |+|.+++++++++.+.+
T Consensus 234 ~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG~-Pi~av~g~~~i~~~~~~~~ 310 (453)
T PRK07046 234 VLPEPGFHEALRELTRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGGV-PCAVYGFSAELAERAQAAK 310 (453)
T ss_pred cCCCHHHHHHHHHHHHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCCC-cceeeeehHHHHHHHhhcc
Confidence 99999999999999999999999999998 3 2232222456799999999999999998 99999999999988752
Q ss_pred -------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC
Q 021893 154 -------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226 (306)
Q Consensus 154 -------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~ 226 (306)
..+.+||.+|+++++++.++++.+.++++.++++++.++++++|+++...+ +....+++.|.++.+.+....
T Consensus 311 ~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~-~~~~~v~g~G~~~~i~~~~~~ 389 (453)
T PRK07046 311 ASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARH-GLPWHVTRVGARVEFQFAPTP 389 (453)
T ss_pred ccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCcEEEEEEeCCC
Confidence 136679999999999999999999888899999999999999999988776 366789999999888764321
Q ss_pred C-----------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 227 L-----------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 227 ~-----------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
. ......+...|+++||++.+. .+.++++|+ ++++||++++++++++++ ++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-~~~~~~~p~--~t~~did~~~~~~~~~l~-~~ 451 (453)
T PRK07046 390 PRNGAEAAAALDPELEAALHLYLLNRGVLITPF-HNMMLVCPA--TTAADVDRLVAAFDACLG-EL 451 (453)
T ss_pred CCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc-cCcEEEeCC--CCHHHHHHHHHHHHHHHH-HH
Confidence 0 112346788899999999885 457888864 899999999999999988 64
No 82
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.5e-35 Score=269.27 Aligned_cols=274 Identities=26% Similarity=0.438 Sum_probs=227.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccc--cccCCCC-----CCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEA--IRGFGPL-----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+++||+|.++|||.+.++.+.++.... ...+.+. .+.+..++|+|++.+++.++.+++++++|++||+++++|
T Consensus 132 ~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G 211 (426)
T PRK00062 132 RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMG 211 (426)
T ss_pred CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCC
Confidence 578999999999999777766442211 1111111 124577889999999999987667899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP- 153 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~- 153 (306)
.+.+++++|++|+++|++||+++|+||+|+|+ +.|..+..+.+++.||+.++||++++|+ |+|++++++++++.+..
T Consensus 212 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G~-p~ga~~~~~~i~~~~~~~ 289 (426)
T PRK00062 212 VVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGGL-PVGAFGGRREIMEQLAPL 289 (426)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCCC-cceeeeEHHHHHHhhccC
Confidence 99999999999999999999999999999999 6776666677888999999999999998 99999999999998853
Q ss_pred --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC----
Q 021893 154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---- 227 (306)
Q Consensus 154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~---- 227 (306)
..+..+++++++.++++.++++.+.++++.+++++..++++++|+++...++ .+..+++.|.++.+.+.++..
T Consensus 290 ~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i~l~~~~~~~~~ 368 (426)
T PRK00062 290 GPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGLFFTDEPVTNYA 368 (426)
T ss_pred CCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEEEEecCCCcchh
Confidence 2455678899999999999999998878999999999999999998877663 677889999999998874310
Q ss_pred ------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 228 ------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 228 ------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
......+.+.|+++||++.+.+.+.++++ ..++++++++++++|++++. .+
T Consensus 369 ~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~-~~ 425 (426)
T PRK00062 369 DAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFA-AL 425 (426)
T ss_pred hhccccHHHHHHHHHHHHHCCeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHH-hh
Confidence 11245789999999999998765677775 78999999999999999987 53
No 83
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=3.3e-34 Score=260.10 Aligned_cols=265 Identities=40% Similarity=0.727 Sum_probs=224.7
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+|+++.++|||....+...+........+.+...++.+++++|++.+++.++ +++++|+++|+++++|...++.+
T Consensus 115 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~ 191 (379)
T TIGR00707 115 KKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAE 191 (379)
T ss_pred CCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHH
Confidence 479999999999999888877776544445556666777888999999999997 46899999999988887777999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|.++|++||+++|+||+|++|++.|..+.....+..+|++++||++++|+ |+||+++++++++.+.......+++
T Consensus 192 ~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~ 270 (379)
T TIGR00707 192 FLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGGV-PIGATLAKEEVAEAFTPGDHGSTFG 270 (379)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCCc-ccEEEEEcHHHHhhhcCCCCCCCCC
Confidence 999999999999999999999999988776554455677889999999999999 9999999999999988766667788
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
.++++++++.++++.+...++.++++++++.++++|++.....+ . ...+..|.++++.+++ ...++.+.|.++
T Consensus 271 ~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~ 343 (379)
T TIGR00707 271 GNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYP-N-KEVRGKGLMLGIELEA-----PCKDIVKKALEK 343 (379)
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCC-C-CccccCceEEEEEecC-----cHHHHHHHHHHC
Confidence 89999999999999887667889999999999999998765432 2 2344578888887763 257899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
||.+.|.+.+++|++++...+++++++++++|++++
T Consensus 344 Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 344 GLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 999999877899999998899999999999998763
No 84
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-31 Score=222.74 Aligned_cols=266 Identities=23% Similarity=0.388 Sum_probs=223.7
Q ss_pred ceEEEEecCCCCcccchhcccCCcccc----ccCCCCCCCcccccCC--------------CHHHHHHHHHhcC---CcE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAI----RGFGPLLPGHLKVDFG--------------DITALEKIFKESG---DQI 61 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--------------d~~~le~~i~~~~---~~~ 61 (306)
-.|++|.|+|||+++++++.+.+.... ..|.|..-.+....|+ -++++|++|.++. ..+
T Consensus 193 lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pV 272 (484)
T KOG1405|consen 193 LSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPV 272 (484)
T ss_pred eeeeeeccccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCe
Confidence 469999999999999999999854332 1121111122222222 2788999999865 468
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC--CCcEEEeccccc-CCcccc
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV--RPDMVILGKALG-GGVIPV 138 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~--~~d~~s~sK~~~-~G~~~~ 138 (306)
++++|||+++.+|.-..+++|++.|+++|++||+.+|+||+|+|.|.+|..++.++|++ -||+++|||-|. ||+
T Consensus 273 aaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf--- 349 (484)
T KOG1405|consen 273 AAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF--- 349 (484)
T ss_pred EEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc---
Confidence 99999999999999999999999999999999999999999999999999999999987 569999999887 676
Q ss_pred eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
.. .++++ --.+..+.+||.+.+.-...+.+.++.+.++++....+..++.|..+|.++...+|+.+...++.|.++
T Consensus 350 --fh-~~~fr-pn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~ 425 (484)
T KOG1405|consen 350 --FH-DEEFR-PNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFI 425 (484)
T ss_pred --cc-CcccC-CCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEE
Confidence 32 22221 112345788999999988899999999999999999999999999999999999998889999999999
Q ss_pred EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+++++ +..-..|+..++-+|+.++.++...||+.|++..++...+-+++++++.+.
T Consensus 426 a~d~ps---~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 426 AWDCPS---GSIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred EEeCCC---hHHHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 999996 455668999999999999999999999999999999999999999999887
No 85
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.97 E-value=3.6e-29 Score=229.54 Aligned_cols=264 Identities=23% Similarity=0.331 Sum_probs=200.4
Q ss_pred cceEEEE-ecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893 2 QAIIVSC-CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 2 ~~~ii~~-~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
|++|+.+ .++|||........+... .....+....+..++|+|+++|+++++++++++++|++||++++ .+++
T Consensus 130 r~~i~~~~~~~~h~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~ 203 (431)
T PRK06209 130 RDLVARCADHPFFSTDDWFIGTTPMS--AGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQD 203 (431)
T ss_pred CCeEEEeccCccccccccccccCCCC--CCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCH
Confidence 5688888 788887432221111100 00000112335678899999999999876678999999999865 6789
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh--cCC-----
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC--IQP----- 153 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~--~~~----- 153 (306)
++|++|+++|++||++||+||+++|+++.+... ...+++.||++++||++++|+ ++|++++++++++. +..
T Consensus 204 ~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~-~~~~gv~PDi~t~gK~lggG~-p~~av~~~~~i~~~~~~~~~~~~~ 281 (431)
T PRK06209 204 GFLHEVRRLCHENGALFILDEMITGFRWHMRGA-QKLYGIVPDLSCFGKALGNGF-AVSALAGKREYMELGGLEHTDRER 281 (431)
T ss_pred HHHHHHHHHHHHcCCEEEEEcccccCCcCcchh-hHHhCCCcceeeehhhhcCCc-ccEEEEEHHHHHhhhcccccCCCC
Confidence 999999999999999999999999986543222 335789999999999999998 99999999999886 311
Q ss_pred -CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----C
Q 021893 154 -GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----L 227 (306)
Q Consensus 154 -~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~ 227 (306)
..++.++.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|.++.+.+.... .
T Consensus 282 ~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~~~~~ 360 (431)
T PRK06209 282 VFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGNGQPS 360 (431)
T ss_pred ceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCcccCCc
Confidence 1257788899999999999999999888999999999999999999877663 55567777777666554211 0
Q ss_pred hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
......+.+.|+++|+++.| ++++ ..+|++||++++++|+++++ ++.
T Consensus 361 ~~~~~~~~~~l~~~Gi~~p~-----l~is--~~ht~~dId~~l~~l~~~l~-~~~ 407 (431)
T PRK06209 361 QAFRTLFLQETIRRGVLMPS-----LVVS--YAHGDADIERTIDAVHGALG-VYR 407 (431)
T ss_pred HHHHHHHHHHHHHCCccccc-----cccc--ccCCHHHHHHHHHHHHHHHH-HHH
Confidence 11133678899999998732 4444 78899999999999999999 773
No 86
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=8.1e-28 Score=217.28 Aligned_cols=264 Identities=19% Similarity=0.232 Sum_probs=203.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------ccccc--------CCCHHHHHHHHHhcCCcEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVD--------FGDITALEKIFKESGDQIAG 63 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--------~~d~~~le~~i~~~~~~~~~ 63 (306)
+.|++..|+-+|-..+.+++.++.+..-...|.|+. ++.++ ..|++.++++++ ++|++
T Consensus 90 ~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~ 166 (393)
T COG0436 90 EEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKA 166 (393)
T ss_pred CeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceE
Confidence 459999999999999999998876655555566655 23333 127999999999 58999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccCC---CCCcEEEeccccc-CCccc
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEE---VRPDMVILGKALG-GGVIP 137 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~~---~~~d~~s~sK~~~-~G~~~ 137 (306)
++++.++|+||.+ .+++.|++|.++|++||++||+||+|.++.+.|. ..+. +..+ ....+-||||.++ +|| |
T Consensus 167 i~ln~P~NPTGav-~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGw-R 244 (393)
T COG0436 167 IILNSPNNPTGAV-YSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGW-R 244 (393)
T ss_pred EEEeCCCCCcCcC-CCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccccc-c
Confidence 9999999999965 5899999999999999999999999999877774 2222 2222 1223448999999 999 9
Q ss_pred ceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-
Q 021893 138 VSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV- 211 (306)
Q Consensus 138 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~- 211 (306)
+||++++ +++++.+........++.+.+.+.++.++|+.-.+ +...+.++++++.+.+.|++.. ++....
T Consensus 245 vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~----g~~~~~~ 320 (393)
T COG0436 245 IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG----GLSVVKP 320 (393)
T ss_pred eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC----CeeeccC
Confidence 9999998 88888877666677778999999999999985422 2233456677777777777663 233344
Q ss_pred EEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 212 RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 212 ~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+..+.++|..++. ..++.+|+..|+++ ||.+.|+ +.+++|++ +..+.++++++++++.++++ .+
T Consensus 321 p~Ga~Y~~~~i~~---~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~-~~ 392 (393)
T COG0436 321 PEGAFYLFPKIPE---LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLA-EY 392 (393)
T ss_pred CCeeEEEEeecCC---CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHH-hc
Confidence 5577777877774 25788999999877 8999985 35799999 77778999999999999887 43
No 87
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.96 E-value=1.9e-27 Score=197.12 Aligned_cols=278 Identities=29% Similarity=0.463 Sum_probs=229.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCc-ccccCCC--------------------HHHHHHHHHh---c
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-LKVDFGD--------------------ITALEKIFKE---S 57 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d--------------------~~~le~~i~~---~ 57 (306)
+..+|++++.|||+....+-+|........-. --|++ -..|.+| .+.+++.+++ .
T Consensus 128 hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v-~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~ 206 (452)
T KOG1403|consen 128 HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGV-AKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAK 206 (452)
T ss_pred cCceEEEechhccceeeeeeccceeccCCCCc-CCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhc
Confidence 46799999999999988887776332221111 11221 1222221 4567777775 2
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEEEecccccCCcc
Q 021893 58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVI 136 (306)
Q Consensus 58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~ 136 (306)
+..+++++-|..++-+|.+.|++.+.+.+.+..|.+|=+.|.||+|.||||.|. .|+++.+++.||+++.+|.+|.|.
T Consensus 207 g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGh- 285 (452)
T KOG1403|consen 207 GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGH- 285 (452)
T ss_pred CCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCC-
Confidence 356899999999999999999999999999999999999999999999999996 677888999999999999999999
Q ss_pred cceeeEeCHHHHhhcCC--CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893 137 PVSAVLADKEVMLCIQP--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 214 (306)
Q Consensus 137 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 214 (306)
|++.++.++++.+.+.. ....++|.+|+++++++++.|+.+++++++++.++.+..|...|.++...+ +.+-++++.
T Consensus 286 PVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh-~~IGDvRGv 364 (452)
T KOG1403|consen 286 PVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKH-ECIGDVRGV 364 (452)
T ss_pred eeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhc-cceeccccc
Confidence 99999999999998864 356789999999999999999999999999999999999999999998887 488999999
Q ss_pred eeEEEEEEecCC-----ChhhHHHHHHHHHHC-CceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 215 GLFNAVEFDKTA-----LPVSAYDICLKMKER-GILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 215 g~~~~i~~~~~~-----~~~~~~~~~~~l~~~-Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
|+++.+++..+. ....+..+...|++. +|+++.. +.+.+.|-|+.+.+++++++++..|+++|. .+.+
T Consensus 365 GLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT-~mee 440 (452)
T KOG1403|consen 365 GLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT-VMEE 440 (452)
T ss_pred eEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH-HHHH
Confidence 999999988654 122344567777766 7888864 467899999999999999999999999987 6543
No 88
>PLN02822 serine palmitoyltransferase
Probab=99.95 E-value=3.4e-26 Score=212.23 Aligned_cols=252 Identities=21% Similarity=0.273 Sum_probs=192.5
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC------CcE-EEEEEccccCCCCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG------DQI-AGFLFEPIQGEAGV 75 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~------~~~-~~v~v~~~~~~~G~ 75 (306)
.++|++..+||+.+..++.+++ ..+..++|||++.++..+++.. +++ ++|++|++++++|.
T Consensus 193 gd~Ii~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~ 260 (481)
T PLN02822 193 GDIIVADEGVHWGIQNGLYLSR------------STIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQ 260 (481)
T ss_pred CCEEEEeCCccHHHHHHHHHcC------------CeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCC
Confidence 4577788889887755555544 2346789999999998887531 234 89999999999999
Q ss_pred ccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCC---CCcEE--Eeccccc--CCcccceeeEeCHH
Q 021893 76 IIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV---RPDMV--ILGKALG--GGVIPVSAVLADKE 146 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~---~~d~~--s~sK~~~--~G~~~~g~~~~~~~ 146 (306)
+.+ +++|+++|++||++||+||+|+ | +|+.|.+. .+++++ .+|++ |+||+++ ||+ ++++++
T Consensus 261 i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~-~e~~~v~~~~~dii~~s~sKalg~~GG~-----i~g~~~ 330 (481)
T PLN02822 261 IAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGL-SEHFGVPIEKIDIITAAMGHALATEGGF-----CTGSAR 330 (481)
T ss_pred ccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCCh-HHHcCCCCCCCeEEEecchhhhhhCCeE-----EEcCHH
Confidence 998 9999999999999999999998 3 56666654 566665 56776 4889998 555 899999
Q ss_pred HHhhcCCCCccCCCCCC--HHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 147 VMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 147 ~~~~~~~~~~~~~~~~~--~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+++.++...+..+|+++ +..+.++.++++.+.. ++..++++++++++++.|++.. +........+.++++.+.
T Consensus 331 ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~----g~~~~~~~~spi~~l~l~ 406 (481)
T PLN02822 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP----GLSIGSNTLSPIVFLHLE 406 (481)
T ss_pred HHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CcccCCCCCCCEEEEEeC
Confidence 99988876677777665 6677888889988765 5688899999999999998752 122233345677777775
Q ss_pred cC-C----ChhhHHHHHHHHH-HCCceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 224 KT-A----LPVSAYDICLKMK-ERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 224 ~~-~----~~~~~~~~~~~l~-~~Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+. . ......++++.|+ ++||++.+. .+..+|++++..++++||++++++|++++. .+
T Consensus 407 ~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~-~~ 478 (481)
T PLN02822 407 KSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAA-SV 478 (481)
T ss_pred CCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHH-HH
Confidence 31 0 0122468999998 779999964 135799998899999999999999999987 54
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=1.1e-24 Score=199.41 Aligned_cols=247 Identities=21% Similarity=0.270 Sum_probs=184.7
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhH
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
++|++...||+.+......++. .+..++++|++.+++.++... +++++|+++++++++|.+.+
T Consensus 132 ~~I~~~~~~H~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~---- 195 (406)
T PRK13393 132 CVILSDELNHASMIEGIRHSRA------------EKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP---- 195 (406)
T ss_pred CEEEEccchhHHHHHHHHHcCC------------eEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC----
Confidence 5778888888877655443321 135678899999999997642 36789999999999999998
Q ss_pred HHHHHHHHHHcCCEEEEehhhh-cc-cccccccccccCCCC--CcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEVR--PDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~~~~~~--~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
+++|.++|++||+++|+||+|+ |+ |+.|..+ ....++. +|++ ++||+++ ||+ +++++++++.+...
T Consensus 196 l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~~GG~-----~~~~~~~~~~l~~~ 269 (406)
T PRK13393 196 IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGVMGGY-----ITGSAALCDFIRSF 269 (406)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcccCce-----eeCCHHHHHHHHHh
Confidence 9999999999999999999998 65 7777655 3444443 4665 9999998 554 88888888877654
Q ss_pred Ccc--CCCCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893 155 EHG--STFGGNPLASAVAIASLDVIRDEK-LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231 (306)
Q Consensus 155 ~~~--~~~~~~~~~~~aa~~al~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 231 (306)
... .+.+.++.+++++.++++.+.+.. ...+++++.+++++.|++.... ..++.+.++.+.+.+ ....
T Consensus 270 ~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~------~~~~~~~i~~v~~~~---~~~~ 340 (406)
T PRK13393 270 ASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAGIP------HLPNPSHIVPVMVGD---PVLC 340 (406)
T ss_pred CcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCCC------cCCCCCCeEEEEeCC---HHHH
Confidence 332 244567788888999998876532 2456678888888888775211 224566677765542 2356
Q ss_pred HHHHHHHHH-CCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 232 YDICLKMKE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 232 ~~~~~~l~~-~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.++.+.|++ +||++.+. +.+.+|++|+..++++|++.++++|++++. ++.
T Consensus 341 ~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~-~~~ 398 (406)
T PRK13393 341 KQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA-RLG 398 (406)
T ss_pred HHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-hcC
Confidence 789999988 59998742 347899999999999999999999999988 653
No 90
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=1.1e-24 Score=193.63 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=195.5
Q ss_pred ceEEEEecCCCCcccchhcccCCccc----cccCCCCCCC-------cccccCCCHHHHHHHHHhcC---CcEEEEEEcc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEA----IRGFGPLLPG-------HLKVDFGDITALEKIFKESG---DQIAGFLFEP 68 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~----~~~~~~~~~~-------~~~~~~~d~~~le~~i~~~~---~~~~~v~v~~ 68 (306)
...++|+.||.+......++..+... +.+.++...+ +..++|||++.||++|+++. .+.++|+++.
T Consensus 100 e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 100 EAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred CcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEec
Confidence 36789999999988777777764322 2333333333 58899999999999999732 1478999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCCCC---c--EEEeccccc--CCcccce
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRP---D--MVILGKALG--GGVIPVS 139 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~~~---d--~~s~sK~~~--~G~~~~g 139 (306)
+++|.|.+.| |++|.+++++|+.+|++||+|+ | +|..|.++ ++++++.+ | +.|+||++| ||+
T Consensus 180 VfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~-~e~~g~~~~~vdi~~gTlsKAlGs~Gg~---- 250 (388)
T COG0156 180 VFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGL-AEHFGLEPEEVDIIVGTLGKALGSSGGY---- 250 (388)
T ss_pred cccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccH-HHHhCCCCccceEEEEEchhhhcccCce----
Confidence 9999999999 9999999999999999999998 5 56677776 55666542 3 449999999 676
Q ss_pred eeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 140 AVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
+.+++.+.+.+........| +.+|...+++.++++.+.+ .+.+++++++...++..+...... ..+....
T Consensus 251 -v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~~------~~~s~s~ 323 (388)
T COG0156 251 -IAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGLV------LLPSESP 323 (388)
T ss_pred -eeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCc------cCCCCCC
Confidence 89999998888765433333 4566777788899999986 456788888888888555554311 2344455
Q ss_pred EEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 217 FNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
++++.+.+ +....++...|+++||++.+ .+...+|++++..+|++||+.++++|.++
T Consensus 324 I~pv~~gd---~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGD---EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCC---HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 56666664 46688999999999999884 24678999999999999999999998764
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=3.1e-24 Score=196.20 Aligned_cols=246 Identities=21% Similarity=0.291 Sum_probs=178.3
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhH
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|+....||+........++. .+..++++|+++++++++... +++++|+++++++++|.+.+
T Consensus 132 ~~v~~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~---- 195 (402)
T TIGR01821 132 CVIFSDELNHASMIEGIRHSGA------------EKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP---- 195 (402)
T ss_pred CEEEEcchHhHHHHHHHHHcCC------------eEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----
Confidence 3555556677655443332221 123467889999999998643 36899999999999999988
Q ss_pred HHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCC--CCcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
+++|.++|++||++||+||+|+ | ++..|... ....++ .+|++ ++||+++ ||+ +++++++++.+...
T Consensus 196 l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~GG~-----i~~~~~~~~~l~~~ 269 (402)
T TIGR01821 196 IEEICDLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGVVGGY-----IAASRKLIDAIRSY 269 (402)
T ss_pred HHHHHHHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhccCCce-----eecCHHHHHHHHHh
Confidence 9999999999999999999998 5 34555443 233343 35665 9999998 554 88899988877543
Q ss_pred Cc--cCCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893 155 EH--GSTFGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231 (306)
Q Consensus 155 ~~--~~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 231 (306)
.. ..+...++.+++++.++++.+.+. ...++.+++.+++++.|++++.. .....+.++++.+.. ....
T Consensus 270 ~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~------~~~~~~~i~~i~~~~---~~~a 340 (402)
T TIGR01821 270 APGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGIP------VIPNPSHIVPVIIGD---AALC 340 (402)
T ss_pred CcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCCC------cCCCCCCEEEEEeCC---HHHH
Confidence 22 223456788889999999988754 34566778888999888876311 122345666665542 2346
Q ss_pred HHHHHHHHH-CCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 232 YDICLKMKE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 232 ~~~~~~l~~-~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.++++.|++ +||++.+. +..++|++++..++++|++++++.|+++++ ++
T Consensus 341 ~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~-~~ 397 (402)
T TIGR01821 341 KKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWD-RL 397 (402)
T ss_pred HHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 789999875 59998752 346899999999999999999999999988 65
No 92
>PRK07324 transaminase; Validated
Probab=99.93 E-value=3.3e-24 Score=193.91 Aligned_cols=266 Identities=17% Similarity=0.222 Sum_probs=177.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
.+|++..|+.+|...+..++..+.+..-...|.++. ++.+|. .|++++++.++ ++++++
T Consensus 81 ~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~kli 157 (373)
T PRK07324 81 ENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR---PNTKLI 157 (373)
T ss_pred hhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC---CCCcEE
Confidence 367888888888776666665543322222233322 233332 37888888776 578899
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCcccceeeE
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVL 142 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~ 142 (306)
+++.++|++|.+ .+++.+++|.++|++||+++|+||+|.++...+...+ .+..+....+.|+||.++ +|+ |+||++
T Consensus 158 ~i~~p~NPtG~~-~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~-RiG~i~ 235 (373)
T PRK07324 158 CINNANNPTGAL-MDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGI-RVGWIA 235 (373)
T ss_pred EEeCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccc-eeEEEe
Confidence 999999999965 5799999999999999999999999998755442211 122222334559999999 899 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
+++++++.+.......+++.+.+.+.++..+++.. +.+.+++++..+..++.+.+.....+......+..|.+.++.+
T Consensus 236 ~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~--~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~ 313 (373)
T PRK07324 236 ANEEVIDILRKYRDYTMICAGVFDDMLASLALEHR--DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKL 313 (373)
T ss_pred cCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEe
Confidence 99999988877655556677778887777776532 2222333222222223333322222222223334455566666
Q ss_pred ecCCChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 223 DKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+. ..+..++++.|+ ++||.+.|+. ++++|++ +..+++.+++++++|+++++ ++
T Consensus 314 ~~---~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~~l~~~l~rl~~~l~-~~ 371 (373)
T PRK07324 314 DV---DMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTETLKKGLKKLSEFLR-EF 371 (373)
T ss_pred CC---CCCHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH-hc
Confidence 53 346778999876 6699999873 5899999 45678999999999999988 54
No 93
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.92 E-value=5.7e-24 Score=182.76 Aligned_cols=264 Identities=17% Similarity=0.215 Sum_probs=190.9
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCc-----------ccccC--------CCHHHHHHHHHhcCCcEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-----------LKVDF--------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--------~d~~~le~~i~~~~~~~~~v 64 (306)
.|++..|--.|-..+....+.+.+..-...|.|+.+ +..|. -|+++||+.+.+ ++++++
T Consensus 85 ~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~ 162 (388)
T COG1168 85 WIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLF 162 (388)
T ss_pred eEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEE
Confidence 344555555566666666777666666666777662 11111 189999999996 567899
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccc---cC--CCCCcEEEeccccc-CCccc
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASD---WE--EVRPDMVILGKALG-GGVIP 137 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~---~~--~~~~d~~s~sK~~~-~G~~~ 137 (306)
+++++||++| ++++++.|.+|.++|.+||+++|+||+|+++...|. .+++. .. ....-+.+-||+|. +|+ .
T Consensus 163 iLCnPHNP~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL-~ 240 (388)
T COG1168 163 ILCNPHNPTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGL-K 240 (388)
T ss_pred EEeCCCCCCC-ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhh-h
Confidence 9999999998 678999999999999999999999999999866663 22211 11 11112335679999 899 9
Q ss_pred ceeeEe-CHHHHhhcC-CCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893 138 VSAVLA-DKEVMLCIQ-PGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213 (306)
Q Consensus 138 ~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 213 (306)
+++++. ++++..++. ..........|.+++.|..++.+.... +++.+.++++.+++.+.+++..+. .....+.
T Consensus 241 ~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~---v~v~~p~ 317 (388)
T COG1168 241 CAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPG---VKVTEPQ 317 (388)
T ss_pred heeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCC---cEEecCC
Confidence 997766 566544432 222344445688999999999987765 668889999999999999987533 3344455
Q ss_pred eeeEEEEEEecCCChhhHHHHHHHHHHC-Cceecc------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 214 RGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP------THDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
...+.|+++... +.+.+++.+.++++ +|.+.+ .+.+++|++ +.++++-+++++++|+++++
T Consensus 318 gTYL~WLD~r~l--~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 318 GTYLAWLDCREL--GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERLKRALK 385 (388)
T ss_pred Cceeeeeecccc--CCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHHHHHHHh
Confidence 556668888864 34556788888776 555554 467999999 88999999999999999887
No 94
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=8.3e-24 Score=193.70 Aligned_cols=223 Identities=23% Similarity=0.331 Sum_probs=170.2
Q ss_pred ccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccc
Q 021893 40 LKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASD 116 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~ 116 (306)
..++++|+++||++++... +++++|+++++++++|.+.+ +++|.++|++||++||+||+|+ | +++.|..+ .+
T Consensus 157 ~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~ 231 (407)
T PRK09064 157 HIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AE 231 (407)
T ss_pred EEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HH
Confidence 4567889999999998543 46899999999999999988 9999999999999999999998 6 57777655 34
Q ss_pred cCCC--CCcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhhcc-HHHHHH
Q 021893 117 WEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDEK-LAERSA 187 (306)
Q Consensus 117 ~~~~--~~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~~-~~~~~~ 187 (306)
..++ .+|++ ||||+++ || |+++++++++.+...... .+...++.+++++.++++.+...+ ..++++
T Consensus 232 ~~~~~~~~div~~t~sKa~g~~GG-----~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~ 306 (407)
T PRK09064 232 RDGLMDRIDIIEGTLAKAFGVMGG-----YIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQ 306 (407)
T ss_pred hcCCCCCCeEEEEecchhhhccCc-----eEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 4443 45666 9999998 44 488899988876543222 234567778888889999887643 457788
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC-------CCCEEEEeCCC
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT-------HDTIVRLTPPL 259 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------~~~~lRi~~~~ 259 (306)
++++++++.|++++.. .....+.++++.+.. ...+.++.+.|++ +||++.+. +.+++|++++.
T Consensus 307 ~~~~~l~~~L~~~g~~------~~~~~~~iv~i~~~~---~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~ 377 (407)
T PRK09064 307 ERAAKLKAALDAAGIP------VMPNESHIVPVMVGD---PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTP 377 (407)
T ss_pred HHHHHHHHHHHHcCCC------CCCCCCCEEEEEeCC---HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCC
Confidence 8999999999875311 112335566665542 2456789999875 59998752 23689999999
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcC
Q 021893 260 SISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 260 ~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.++++|++.+++.|+++++ ++.
T Consensus 378 ~~t~edi~~l~~~l~~~~~-~~~ 399 (407)
T PRK09064 378 FHTDEMIDHLVEALVEVWA-RLG 399 (407)
T ss_pred CCCHHHHHHHHHHHHHHHH-HcC
Confidence 9999999999999999998 653
No 95
>PRK07682 hypothetical protein; Validated
Probab=99.92 E-value=2.2e-24 Score=195.70 Aligned_cols=263 Identities=14% Similarity=0.140 Sum_probs=179.6
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------ccccc-------CCCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVD-------FGDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-------~~d~~~le~~i~~~~~~~~~v~ 65 (306)
+|++..|+.++-...+.++..+.+..-...|.++. ++.++ ..|++.|+++++ +++++++
T Consensus 83 ~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~ 159 (378)
T PRK07682 83 EIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT---AKTKAIL 159 (378)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC---cccEEEE
Confidence 57777777776655555554433222222233322 11121 126899998886 4678887
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccC---CCCCcEEEeccccc-CCccccee
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWE---EVRPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~---~~~~d~~s~sK~~~-~G~~~~g~ 140 (306)
++.++|++|. +.+.+.+++|.++|++|++++|+||+|.++.+.+...++ ... +....+.||||.++ +|+ |+||
T Consensus 160 ~~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~ 237 (378)
T PRK07682 160 LCSPNNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGW-RLGF 237 (378)
T ss_pred EECCCCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhh-hhhh
Confidence 7777899996 568999999999999999999999999987554432211 111 12223559999999 899 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
+++++++++.+........++.+.+.+.++..+++... .++..++++++++.+.+.|++.. .....+..|.++
T Consensus 238 ~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-----~~~~~p~g~~~~ 312 (378)
T PRK07682 238 IAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-----LTCHVPGGAFYA 312 (378)
T ss_pred hhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCeeEEE
Confidence 99999999888654333445667788888777775421 12345666777777777777652 222334566777
Q ss_pred EEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 219 AVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|..++.. ..+..++++.|+ ++||.+.|+ +++++|++. ..+++++++++++|+++++ ++
T Consensus 313 ~~~~~~~--~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~l~-~~ 377 (378)
T PRK07682 313 FPSISST--GLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSY--ATSLEQLQEAMKRMKRFVE-NK 377 (378)
T ss_pred EEeccCC--CCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHh-hc
Confidence 7766431 245678998886 679999985 268999995 4578999999999999987 54
No 96
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.92 E-value=6.5e-24 Score=193.83 Aligned_cols=258 Identities=13% Similarity=0.162 Sum_probs=179.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++-...+..+..+.+..-...|.|+. ++.+|. .|++++++.+. ++++++
T Consensus 94 ~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v 170 (399)
T PRK07681 94 KEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA---DKAKMM 170 (399)
T ss_pred CeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEE
Confidence 468888888888777666665544333333344444 122332 16788887775 468888
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccC---CCCCcEEEeccccc-CCcccc
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE---EVRPDMVILGKALG-GGVIPV 138 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~---~~~~d~~s~sK~~~-~G~~~~ 138 (306)
+++.++|++|.+ .+++.+++|.++|++||++||+||+|.++...+... ++ ... .....+.||||.++ +|+ |+
T Consensus 171 ~l~~P~NPTG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-Ri 248 (399)
T PRK07681 171 ILNFPGNPVPAM-AHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS-RI 248 (399)
T ss_pred EEeCCCCCcCcC-CCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccc-ee
Confidence 888779999955 589999999999999999999999999875444221 11 111 12234559999998 999 99
Q ss_pred eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
||+++++++++.+........++.+.+.+.++..+++.... ++..+.++++.+.+.+.|++. ++....+..|.
T Consensus 249 G~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~~g~ 323 (399)
T PRK07681 249 GYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-----GWNVDKPAGSM 323 (399)
T ss_pred EEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeee
Confidence 99999999998887644445566777777777777653211 223344555555555555543 12223356688
Q ss_pred EEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 217 FNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
++|+.++. ..+..++++.|++ +||.+.|+ +++++|++. ..+.+++++++++|++
T Consensus 324 f~~~~l~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 324 FVWAEIPK---GWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIAL--VQDEEVLQQAVENIRN 384 (399)
T ss_pred EEEEECCC---CCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHH
Confidence 89998874 3457789999987 79999885 247999995 4678999999999987
No 97
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.6e-23 Score=191.36 Aligned_cols=265 Identities=15% Similarity=0.163 Sum_probs=178.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----------CCHHHHHHHHHhcCCcE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----------GDITALEKIFKESGDQI 61 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----------~d~~~le~~i~~~~~~~ 61 (306)
..|++..|+.++-...+.++..+.+..-...|.|+. ++.++. .|++.|++++++ ++
T Consensus 103 ~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~ 179 (405)
T PRK06207 103 DELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---GV 179 (405)
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh---cC
Confidence 457777887777766666555543333333344433 122221 278999998873 57
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccCC----CCCcEEEeccccc-CCc
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEE----VRPDMVILGKALG-GGV 135 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~~----~~~d~~s~sK~~~-~G~ 135 (306)
++++++.++|++|.+ .+.+.+++|.++|++||++||+||+|..+.+.+..+ +...+. ....+.||||.++ +|+
T Consensus 180 k~v~l~~P~NPTG~~-~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl 258 (405)
T PRK06207 180 RVFLFSNPNNPAGVV-YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY 258 (405)
T ss_pred eEEEECCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCccc
Confidence 788888788999965 579999999999999999999999999875555322 111111 1223448999999 999
Q ss_pred ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893 136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213 (306)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 213 (306)
|+||+++++++++.+.........+.+.+.+.++..+++... -++..++++++++.+.+.|++ .++.....+.
T Consensus 259 -RiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~p~ 333 (405)
T PRK06207 259 -RLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG----VEGVFVRAPQ 333 (405)
T ss_pred -ceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCC
Confidence 999999999998888754444444556677777766664210 112233344444444444443 2223333456
Q ss_pred eeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 214 RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 214 ~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.|+++|+.++.. ..+..++++.|+ ++||.+.|+ .++++|++.. .+.+++++++++|.++++ ++
T Consensus 334 gg~fl~~~l~~~--~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~-~~ 403 (405)
T PRK06207 334 AGSYLFPRLPRL--AVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIE-RY 403 (405)
T ss_pred eeEEEEEeCccc--CCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH-Hh
Confidence 788999988741 135678999997 679999985 2579999954 578999999999999988 64
No 98
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=6.8e-24 Score=194.18 Aligned_cols=262 Identities=17% Similarity=0.229 Sum_probs=183.2
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v 66 (306)
.|++..|+.+|-.....++..+.+..-...|.++. +..++. .|++.|++.+. ++++++++
T Consensus 117 ~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~---~~~k~i~i 193 (413)
T PLN00175 117 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT---SKTRAILI 193 (413)
T ss_pred CEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC---cCceEEEe
Confidence 58888888888766666555443332223344433 122222 26888998886 46889999
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC---CCCcEEEeccccc-CCcccceee
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE---VRPDMVILGKALG-GGVIPVSAV 141 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~---~~~d~~s~sK~~~-~G~~~~g~~ 141 (306)
++++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+...+. +..+ ....+.||||.++ +|+ |+||+
T Consensus 194 ~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~-RiG~~ 271 (413)
T PLN00175 194 NTPHNPTGKM-FTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGW-KIGWA 271 (413)
T ss_pred cCCCCCCCcC-CCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcch-heeee
Confidence 9999999965 58999999999999999999999999976544322211 1112 2223449999999 999 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
++++++++.+........++.+.+.+.++.++++.... ++..++++++++.+.+.|++.+ .....+..|.++|
T Consensus 272 v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~p~g~~f~~ 346 (413)
T PLN00175 272 IAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-----FKVYPSSGTYFVM 346 (413)
T ss_pred EeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCeeEEEE
Confidence 99999998887655555677788888888877754211 3345666677777777776642 2223345677788
Q ss_pred EEEecCCChhhHHHHHHHHH-HCCceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 220 VEFDKTALPVSAYDICLKMK-ERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.++..+ ..+..++++.|+ ++||.+.|+ +.+++|++. ..+++++++++++|+++++
T Consensus 347 ~~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~--~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 347 VDHTPFG-FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF--CKDEETLRAAVERMKTKLK 412 (413)
T ss_pred EeccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE--cCCHHHHHHHHHHHHHHHh
Confidence 8764211 124678999887 559998875 146999995 4689999999999998876
No 99
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=3.3e-23 Score=188.17 Aligned_cols=232 Identities=18% Similarity=0.245 Sum_probs=171.9
Q ss_pred cccccCCCHHHHHHHHHhc-----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh--c
Q 021893 39 HLKVDFGDITALEKIFKES-----------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS--G 105 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~-----------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~--g 105 (306)
+..++|+|++.+++.++.. .+++++|++|++++++|.+.+ +++|+++|++||+++|+||+|+ .
T Consensus 106 ~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~ 181 (392)
T PLN03227 106 VRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGT 181 (392)
T ss_pred EEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccc
Confidence 3557888988888766542 136899999999999999988 9999999999999999999998 3
Q ss_pred ccccccccccccCCCCC----cEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCC--HHHHHHHHHHHHHH
Q 021893 106 LARSGRMLASDWEEVRP----DMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDVI 177 (306)
Q Consensus 106 ~~~~g~~~~~~~~~~~~----d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~aa~~al~~~ 177 (306)
+|+.|.+ ..+++++.| |++++| |+++ + ..|++++++++++.++...+..+|.++ +..+.++.++++..
T Consensus 182 ~g~~G~g-~~~~~g~~p~~~~Div~~slsk~~g--~-~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~ 257 (392)
T PLN03227 182 LGKSGRG-SLEHAGLKPMVHAEIVTFSLENAFG--S-VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGE 257 (392)
T ss_pred cCCCCCc-HHHHcCCCCCCCceEEEeechhhhh--c-cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH
Confidence 4555554 467777777 877555 6554 3 556688899988777655555666654 66777777777554
Q ss_pred -hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE--------eeeEEEEEEecCCCh------hhHHHHHHHHHHCC
Q 021893 178 -RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG--------RGLFNAVEFDKTALP------VSAYDICLKMKERG 242 (306)
Q Consensus 178 -~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--------~g~~~~i~~~~~~~~------~~~~~~~~~l~~~G 242 (306)
..++..++++++++++++.|++. .++ .+..+++ .+.++.+.+.+.... ....++++.|+++|
T Consensus 258 ~~~~~~~~~l~~~~~~l~~~L~~~--~~~-~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G 334 (392)
T PLN03227 258 LAGPQLLNRLHDSIANLYSTLTNS--SHP-YALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEG 334 (392)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhc--CCc-cccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCC
Confidence 44568889999999999999873 222 3334443 356788887541100 01358899999999
Q ss_pred ceeccC-----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 243 ILAKPT-----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 243 i~~~~~-----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+.+.+. ++..+|++++..+|++||++++++|+++++ ++.
T Consensus 335 i~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~-~~~ 384 (392)
T PLN03227 335 VAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVE-AIL 384 (392)
T ss_pred CEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 988531 256789999999999999999999999998 763
No 100
>PRK07505 hypothetical protein; Provisional
Probab=99.91 E-value=3.3e-23 Score=189.34 Aligned_cols=246 Identities=18% Similarity=0.218 Sum_probs=165.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||++.++|||..... ...... ..++..+|++|++.|+++++. ..+.+++++|++ ++|.+.+
T Consensus 135 ~~vi~~~~~~H~s~~~~------~~~~~~----~~~v~~~~~~d~~~l~~~~~~--~~~~~vl~~p~~-~~G~~~~---- 197 (402)
T PRK07505 135 PPHMVFDKNAHASLNIL------KGICAD----ETEVETIDHNDLDALEDICKT--NKTVAYVADGVY-SMGGIAP---- 197 (402)
T ss_pred CCEEEEchhhhHhHHhh------hhhhhc----CCeEEEeCCCCHHHHHHHHhc--CCCEEEEEeccc-ccCCcCC----
Confidence 46899999999843111 111111 135678899999999999874 245677777766 5566777
Q ss_pred HHHHHHHHHHcCCEEEEehhhh--cccccccccccccCCC-CCcEE----EecccccCCcccceeeEe-CHHHHhhcCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEEV-RPDMV----ILGKALGGGVIPVSAVLA-DKEVMLCIQPG 154 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~--g~~~~g~~~~~~~~~~-~~d~~----s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~ 154 (306)
+++|.++|++||++||+||+|+ ++++.|..+..+..+. .+|.. |+||+++++ .|+++. ++++++.+...
T Consensus 198 ~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~---Gg~~~~~~~~~~~~~~~~ 274 (402)
T PRK07505 198 VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS---GGVIMLGDAEQIELILRY 274 (402)
T ss_pred HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc---CeEEEeCCHHHHHHHHHh
Confidence 9999999999999999999994 6777777655555554 45532 899999832 144654 77888877665
Q ss_pred CccCCCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE-EEEEecCCChhhH
Q 021893 155 EHGSTFGG--NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN-AVEFDKTALPVSA 231 (306)
Q Consensus 155 ~~~~~~~~--~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~ 231 (306)
.+..++++ ++++++++.++++.+.++.+.+. .+.+++.++..... .....++.+.++ ++.+.. ....
T Consensus 275 ~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~----~~~l~~~~~~~~~~---~~~~~~g~~~~i~~~~~~~---~~~~ 344 (402)
T PRK07505 275 AGPLAFSQSLNVAALGAILASAEIHLSEELDQL----QQKLQNNIALFDSL---IPTEQSGSFLPIRLIYIGD---EDTA 344 (402)
T ss_pred CCCceeCCCCCHHHHHHHHHHHHHHhccCcHHH----HHHHHHHHHHHHHH---HHhcCCCCCCCEEEEEeCC---HHHH
Confidence 55555543 45788888888886655443332 23333333322111 001223444443 222221 2356
Q ss_pred HHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 232 YDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 232 ~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+.|+++||++.+. +.++||++|+..++++++++++++|++++.
T Consensus 345 ~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 345 IKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred HHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 78999999999999864 236899999999999999999999999887
No 101
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.91 E-value=3.6e-23 Score=187.99 Aligned_cols=261 Identities=16% Similarity=0.253 Sum_probs=179.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.||-...+.++..+....-...|.++. ++.++. .|++.|++.++ ++++++
T Consensus 90 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v 166 (384)
T PRK06348 90 NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT---SKTKAI 166 (384)
T ss_pred hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC---cCccEE
Confidence 468889999998877777766644333333344433 122221 36899998886 467788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC---CCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE---VRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~---~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+...+. ...+ ....+.||||.++ +|+ |+|
T Consensus 167 ~l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG 244 (384)
T PRK06348 167 ILNSPNNPTGAV-FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW-RIG 244 (384)
T ss_pred EEeCCCCCCCcC-CCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc-cce
Confidence 888889999865 58999999999999999999999999987543322111 1111 1223449999999 999 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
|+++++++++.+........++.+.+.+.++..+++.... +++.+.++++.+.+.+.|+.. +......+..|.+
T Consensus 245 ~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~----~~~~~~~p~gg~~ 320 (384)
T PRK06348 245 YVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESI----PNLSLHPPKGSIY 320 (384)
T ss_pred eeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC----CCceeccCCeeEE
Confidence 9999999888877555555667788888888777753221 223444555555555555542 2222233456778
Q ss_pred EEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 218 NAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
+|+.++.. ..+..++++.|++ +||.+.|+ +.+++|++. ..+.+++++++++|++.
T Consensus 321 ~~~~~~~~--~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 321 AFINIKKT--GLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEecccC--CCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence 89888631 2457789998874 69999975 257999995 46889999999988753
No 102
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.5e-23 Score=187.34 Aligned_cols=262 Identities=16% Similarity=0.172 Sum_probs=177.3
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC--------CCHHHHHHHHHhcCCcEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF--------GDITALEKIFKESGDQIAG 63 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------~d~~~le~~i~~~~~~~~~ 63 (306)
..|++..|+.+|-..+...+..+.+..-...|.++. +..+|. .|++.+++.++ +++++
T Consensus 85 ~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~ 161 (382)
T PRK06108 85 ERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT---PRTRA 161 (382)
T ss_pred ceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC---ccceE
Confidence 467777888877665555544432222222233322 233333 26788888886 46788
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cccc-c-cccCC---CCCcEEEeccccc-CCcc
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-A-SDWEE---VRPDMVILGKALG-GGVI 136 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~~~-~-~~~~~---~~~d~~s~sK~~~-~G~~ 136 (306)
+++++++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++... +... + .+... ....+.||||.++ +|+
T Consensus 162 i~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~- 239 (382)
T PRK06108 162 LFINSPNNPTGWT-ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW- 239 (382)
T ss_pred EEEECCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc-
Confidence 8888889999965 58999999999999999999999999976443 2111 1 11111 1122449999998 899
Q ss_pred cceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893 137 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 214 (306)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 214 (306)
|+||+++++++++.+...........+.+.+.++..+++.... ++..++++++++.+++.|++.. ++....+..
T Consensus 240 RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~p~~ 315 (382)
T PRK06108 240 RLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP----GVEVAKPDG 315 (382)
T ss_pred ceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC----CCcccCCCe
Confidence 9999999999988876543334455677888787777754321 3345566666666666665541 222233445
Q ss_pred eeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 215 GLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 215 g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|.++|+.++. ..+..++++.|+ ++||.+.|+ +.+++|++++. +++++++++++|+++++
T Consensus 316 g~~~~~~l~~---~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 316 AMYAFFRIPG---VTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred eEEEEEeCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 7777887764 235678999886 569999874 25799999665 89999999999998876
No 103
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.91 E-value=2.5e-24 Score=186.71 Aligned_cols=261 Identities=14% Similarity=0.214 Sum_probs=187.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------------CCHHHHHHHHHhcC
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------------GDITALEKIFKESG 58 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------------~d~~~le~~i~~~~ 58 (306)
+.|+|..|+|.+-..+.+++-++.+..-.++|.++- .++++. .|+++||.++.
T Consensus 94 ~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t--- 170 (420)
T KOG0257|consen 94 DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT--- 170 (420)
T ss_pred ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc---
Confidence 569999999999888888888877666666666644 133332 28999999999
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccCC---CCCcEEEeccccc-
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEE---VRPDMVILGKALG- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~~---~~~d~~s~sK~~~- 132 (306)
++|++|+++.++|++|.+ .+++.|++|+++|++||+++|+||+|..+.+.|..+ . ....| ....+.|+||.++
T Consensus 171 ~kTk~Ii~ntPhNPtGkv-fsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~ 249 (420)
T KOG0257|consen 171 EKTKAIILNTPHNPTGKV-FSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGV 249 (420)
T ss_pred CCccEEEEeCCCCCcCcc-cCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeee
Confidence 689999999999999965 589999999999999999999999999776777521 1 12233 3445669999999
Q ss_pred CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h-------ccHHHHHHHHHHHHHHHHHHHHh
Q 021893 133 GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D-------EKLAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~-------~~~~~~~~~~~~~l~~~L~~~~~ 202 (306)
.|| |+||+++++.++..+.+......+.-++..+.|..+++..-. + .++.+.++++++.+.+.|++++
T Consensus 250 TGW-rlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg- 327 (420)
T KOG0257|consen 250 TGW-RLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELG- 327 (420)
T ss_pred eee-eeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 899 999999988888877776555556555555555444443322 1 2356778888888888888874
Q ss_pred hCCCceeeEEEeeeEEEEEEecCC---------ChhhHHHHHHHHHHC-CceeccC-----------CCCEEEEeCCCCC
Q 021893 203 QFPNYVKEVRGRGLFNAVEFDKTA---------LPVSAYDICLKMKER-GILAKPT-----------HDTIVRLTPPLSI 261 (306)
Q Consensus 203 ~~~~~~~~~~~~g~~~~i~~~~~~---------~~~~~~~~~~~l~~~-Gi~~~~~-----------~~~~lRi~~~~~~ 261 (306)
.....+..+.++|.+++... ...+...+++++.++ |+.+.|. ..+.+|++ ...
T Consensus 328 ----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~--~~k 401 (420)
T KOG0257|consen 328 ----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFC--FCK 401 (420)
T ss_pred ----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHH--HHh
Confidence 33356667777888877211 011233567788765 8887764 13567777 666
Q ss_pred CHHHHHHHHHHHHH
Q 021893 262 SSNELQEGSKALHD 275 (306)
Q Consensus 262 t~~~i~~~~~~l~~ 275 (306)
+++.++.+.++|++
T Consensus 402 ~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 402 ADETLRKAIERLKK 415 (420)
T ss_pred hHHHHHHHHHHHhh
Confidence 77778877777763
No 104
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.91 E-value=7.7e-23 Score=185.80 Aligned_cols=218 Identities=16% Similarity=0.147 Sum_probs=166.9
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASD 116 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~ 116 (306)
+..++|||++.|++++++++++.++|++++++++.|.+.+ |++|.++|++||++||+||+|+ | +|..|.+. .+
T Consensus 228 ~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~-~e 302 (476)
T PLN02955 228 VFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGV-AE 302 (476)
T ss_pred EEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcH-HH
Confidence 4568999999999999887667789999999999999999 9999999999999999999998 3 46656554 45
Q ss_pred cCCCCCcE----EEeccccc--CCcccceeeEeCHHHHhhcCCCCccCCCC--CCHHHHHHHHHHHHHHhhc-cHHHHHH
Q 021893 117 WEEVRPDM----VILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRDE-KLAERSA 187 (306)
Q Consensus 117 ~~~~~~d~----~s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aa~~al~~~~~~-~~~~~~~ 187 (306)
.+++.+|+ .||||++| ||+ +++++++++.++.......|+ .++...++++++++.+..+ ..+++++
T Consensus 303 ~~g~~~di~ii~~TLsKA~G~~GGf-----i~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~ 377 (476)
T PLN02955 303 EFNCEADVDLCVGTLSKAAGCHGGF-----IACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIW 377 (476)
T ss_pred HhCCCCCCcEEEEeCccchhccCce-----eecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 55554443 69999998 666 999998888877543343333 3455666777888888653 3556777
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCC
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLS 260 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~ 260 (306)
++.+++++. . . ... ...++++.+.+ .....++++.|+++|+++.+. +...+|++++..
T Consensus 378 ~n~~~fr~~---~--G---~~~----~sPI~pI~ig~---~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~ 442 (476)
T PLN02955 378 ERVKEFKAL---S--G---VDI----SSPIISLVVGN---QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAA 442 (476)
T ss_pred HHHHHHHHh---c--C---CCC----CCCEEEEEeCC---HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCC
Confidence 777777763 1 1 111 25566666664 566778999999999998842 345799999999
Q ss_pred CCHHHHHHHHHHHHHHHhhhcC
Q 021893 261 ISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++++||+.+++.|.++.. ...
T Consensus 443 Ht~edId~lv~~L~~~~~-~~~ 463 (476)
T PLN02955 443 HTTEDVKKLITALSSCLD-FDN 463 (476)
T ss_pred CCHHHHHHHHHHHHHHHh-hhc
Confidence 999999999999998877 443
No 105
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=2.6e-23 Score=190.05 Aligned_cols=268 Identities=13% Similarity=0.164 Sum_probs=181.4
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHHHHHHHhcCCcEEEEEEcc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITALEKIFKESGDQIAGFLFEP 68 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~le~~i~~~~~~~~~v~v~~ 68 (306)
.|++..|+.+|-...+..+..+.+..-...|.|+. +..++.+ +++.+++.++.+.+++++++++.
T Consensus 94 ~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~ 173 (405)
T PRK09148 94 QVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNY 173 (405)
T ss_pred cEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeC
Confidence 58888888888766666665543333333344433 1223321 35567777776556788888888
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-c-ccC---CCCCcEEEeccccc-CCcccceeeE
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-S-DWE---EVRPDMVILGKALG-GGVIPVSAVL 142 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~-~~~---~~~~d~~s~sK~~~-~G~~~~g~~~ 142 (306)
++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+..+. . ... +....+.||||.++ +|+ |+||++
T Consensus 174 P~NPtG~~-~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl-R~G~~v 251 (405)
T PRK09148 174 PSNPTAYV-ADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW-RMGFAV 251 (405)
T ss_pred CCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch-heeeee
Confidence 89999965 5899999999999999999999999997654432221 1 111 11223459999999 999 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
+++++++.+........++.+.+.+.++...++.... +...+.++++++.+.+.|++. +.....+..|+++|+
T Consensus 252 ~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~f~~~ 326 (405)
T PRK09148 252 GNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-----GWDIPPPAASMFAWA 326 (405)
T ss_pred CCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-----CCccCCCCeeEEEEE
Confidence 9999998887544444556677777777776652111 223445556666666666553 122234567888999
Q ss_pred EEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 221 EFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.++.........++++.|+ ++||.+.|+ +.+++|++. ..+.+.+++++++|.+++. +.
T Consensus 327 ~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~--~~~~~~l~~al~~l~~~l~-~~ 391 (405)
T PRK09148 327 PIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL--VENEQRIRQAARNIKRFLS-SA 391 (405)
T ss_pred ECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-HH
Confidence 8874211123578888876 679999985 257999995 4678999999999999888 44
No 106
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.91 E-value=1.2e-22 Score=185.20 Aligned_cols=262 Identities=21% Similarity=0.278 Sum_probs=179.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhc---CCcEEEEEEcc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKES---GDQIAGFLFEP 68 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~---~~~~~~v~v~~ 68 (306)
..+++|.+++++......++..+.+..-...+.++. ...++++|+++|++.+++. +.++++|++++
T Consensus 99 ~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~ 178 (393)
T TIGR01822 99 EDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDG 178 (393)
T ss_pred CcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeC
Confidence 367888999987665554543332211111111111 2345578999999999853 23789999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-cccccccccccCCC--CCcEE--EecccccCCcccceeeE
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVL 142 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~ 142 (306)
+++++|.+.+ +++|.++|++||++||+||+|+ |+ +..|... .+..++ .+|+. |+||+++ |+ ++||++
T Consensus 179 v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~-~~~~~~~~~~di~~~s~sK~l~-g~-r~G~~~ 251 (393)
T TIGR01822 179 VFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGS-HELCGVMGRVDIITGTLGKALG-GA-SGGFTT 251 (393)
T ss_pred CccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-HHhcCCCCCCeEEEEEChHHhh-CC-CcEEEE
Confidence 9999999888 9999999999999999999995 43 2233221 122222 34554 8899986 46 899999
Q ss_pred eCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 143 ADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
+++++++.+........+ +.++..++++.++++.+.. ++..++++++.+++++.|++.+.. . . ...+.++.
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~--~-~~~~~~~~ 325 (393)
T TIGR01822 252 ARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAGFD---I--K-PADHPIIP 325 (393)
T ss_pred eCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---C--C-CCCCCEEE
Confidence 999998877643222222 2345556667788877643 456788899999999988875211 1 1 12334455
Q ss_pred EEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 220 VEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+++ .....++++.|.++||.+.. .+...+|++++..++++||++++++|+++.+ ++
T Consensus 326 i~~~~---~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~-~~ 390 (393)
T TIGR01822 326 VMLYD---AVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGR-EL 390 (393)
T ss_pred EEeCC---HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 54442 34577899999999998863 1235799999999999999999999999877 54
No 107
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.91 E-value=9.9e-23 Score=186.25 Aligned_cols=268 Identities=15% Similarity=0.181 Sum_probs=178.3
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHH----HHHHHHHhcCCcE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDIT----ALEKIFKESGDQI 61 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~----~le~~i~~~~~~~ 61 (306)
.|++.+|+.+|-......+..+....-...|.|+. +..++. -|++ .++++++++..++
T Consensus 97 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 97 EVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred eEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 68899999998877777776655444444455544 122322 1344 4577777655678
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c---cccC-CCCCcEEEeccccc-CCc
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A---SDWE-EVRPDMVILGKALG-GGV 135 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~---~~~~-~~~~d~~s~sK~~~-~G~ 135 (306)
++++++.++|++|. +.+.+.+++|.++|++|++++|+||+|.++...+..+ + .+.. +....+.||||.++ +|+
T Consensus 177 ~~i~~~~P~NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 177 KYVVVNFPHNPTTA-TVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred eEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 88888888999995 4689999999999999999999999999775444211 1 1111 12223448999997 999
Q ss_pred ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893 136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213 (306)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 213 (306)
|+||+++++++++.+........+..+.+.+.++..+++.... +++.+.++++.+.+.+.|+.. ++....+.
T Consensus 256 -RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~p~ 329 (403)
T PRK08636 256 -RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-----GWELQKPR 329 (403)
T ss_pred -eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCC
Confidence 9999999999988876543333344555666555544431111 123334444444455555442 12223456
Q ss_pred eeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 214 RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 214 ~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.|+++|+.+++.....++.+++..++ ++||.+.|+ ..+++|++. ..+.+++++++++|+++++ ..
T Consensus 330 ~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~~~rl~~~l~-~~ 401 (403)
T PRK08636 330 ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIAL--IENENRIRQAARNIKKFLK-EL 401 (403)
T ss_pred cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-hh
Confidence 78899998874211123678887765 679999885 257999995 4689999999999999988 53
No 108
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=1.3e-22 Score=186.94 Aligned_cols=260 Identities=16% Similarity=0.135 Sum_probs=179.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
..|++.+|+.++-.....++..+.+..-...|.|+. ++.+|. .|++.|+++++. ++++++++
T Consensus 142 ~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~---~~k~i~~~ 218 (431)
T PRK15481 142 FEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ---GARAVILT 218 (431)
T ss_pred CeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc---CCCEEEEC
Confidence 368888888888777766666554443333455544 223332 368999998873 57777777
Q ss_pred -cccCCCCcccCChhHHHHHHHHHHHc-CCEEEEehhhhccccccccccccc-CCCCCcEEEecccccCCcccceeeEeC
Q 021893 68 -PIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLASDW-EEVRPDMVILGKALGGGVIPVSAVLAD 144 (306)
Q Consensus 68 -~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~~s~sK~~~~G~~~~g~~~~~ 144 (306)
.++|++|.+ .+.+.+++|.++|++| +++||+||+|.++...+....... ......+.||||.+++|+ |+||++++
T Consensus 219 p~p~NPTG~~-~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~Gl-RiG~~i~~ 296 (431)
T PRK15481 219 PRAHNPTGCS-LSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDL-RLAFVASD 296 (431)
T ss_pred CCCCCCCCcc-CCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCc-eeEEEeCC
Confidence 688888855 5899999999999999 999999999998743322111111 111223449999999999 99999999
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
+++++.+........++.+.+++.++..+++.-.- ++..+.++++++.+.+.|++. +.....+..|+++|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-----~~~~~~p~gg~f~~~ 371 (431)
T PRK15481 297 SATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-----GIAIPSPGDGLNLWL 371 (431)
T ss_pred HHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCccccCCCeEEEEE
Confidence 99888876433333455678888888877753211 123444555555555555543 122335678999999
Q ss_pred EEecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 221 EFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++. +..++++.|.++||.+.|+. .+++|++... .++++++.++++|+++++
T Consensus 372 ~l~~-----~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 372 PLDT-----DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred ECCC-----CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 8863 35678999999999999851 3589999643 468999999999999876
No 109
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.90 E-value=2e-22 Score=183.57 Aligned_cols=269 Identities=16% Similarity=0.213 Sum_probs=178.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~ 65 (306)
..|++.+|+.+|-...+.++..+.+..-...|.+++ ++.++. .|++.|+++++..++++++++
T Consensus 92 ~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~ 171 (391)
T PRK07309 92 NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVI 171 (391)
T ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEE
Confidence 357777777777666555554432222122233322 122222 268999999986545688999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc--CCCCCcEEEeccccc-CCcccceee
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW--EEVRPDMVILGKALG-GGVIPVSAV 141 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~--~~~~~d~~s~sK~~~-~G~~~~g~~ 141 (306)
++.++|++|.. .+.+.+++|.++|++||+++|+||+|.++...+.. .+... .+....+.|+||.++ +|+ |+||+
T Consensus 172 l~~P~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RvG~~ 249 (391)
T PRK07309 172 LNYPANPTGVT-YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW-RIGLI 249 (391)
T ss_pred EECCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc-eeEEE
Confidence 88789999854 57889999999999999999999999987544422 11111 111223449999998 999 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
++++++++.+.........+.+.+.+.++...++.... .....+++++++.+.+.|++.. .....+..|.++|
T Consensus 250 v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~p~gg~~~~ 324 (391)
T PRK07309 250 FAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-----FKIIKPDGAFYIF 324 (391)
T ss_pred EeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCeeEEEE
Confidence 99999988876533333345567777777766653211 2234556666666666666541 2223345677778
Q ss_pred EEEecCCChhhHHHHHHHH-HHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 220 VEFDKTALPVSAYDICLKM-KERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+.++... ..+..++++.+ .++||.+.|+ ++++||++.+ .+.++++.++++|+++++ ++.
T Consensus 325 ~~l~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~-~~~ 390 (391)
T PRK07309 325 AKIPAGY-NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYME-EHA 390 (391)
T ss_pred EECCCCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH-hhc
Confidence 7776411 12466788765 4679999875 2579999954 478899999999999988 543
No 110
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.90 E-value=7.5e-23 Score=186.22 Aligned_cols=261 Identities=13% Similarity=0.198 Sum_probs=170.3
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++.+|+-++-...+..+..+.+..-...|.|+. ++.+|. .|++++++.+. +++++++
T Consensus 94 ~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~ 170 (388)
T PRK07366 94 EVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL---AQARLMV 170 (388)
T ss_pred eEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc---ccceEEE
Confidence 47888888888777766655544333333355444 122222 24566666554 4678888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-c-cc---ccCC-CCCcEEEeccccc-CCcccc
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-L-AS---DWEE-VRPDMVILGKALG-GGVIPV 138 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~-~~---~~~~-~~~d~~s~sK~~~-~G~~~~ 138 (306)
+++++|+||.. .+.+.+++|.++|++||++||+||+|.++.+.+.. . ++ +... ....+.||||.++ +|+ |+
T Consensus 171 l~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~Gl-Ri 248 (388)
T PRK07366 171 LSYPHNPTTAI-APLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGF-RI 248 (388)
T ss_pred EeCCCCCCCcc-CCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcch-hh
Confidence 88899999965 58999999999999999999999999987544421 1 11 1111 1123449999997 999 99
Q ss_pred eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
||+++++++++.+........++..+..+.++.+++..... ++..+.++++++.+.+.|++. ++....+..|+
T Consensus 249 G~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~ 323 (388)
T PRK07366 249 GFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-----GWPVPLPEATM 323 (388)
T ss_pred eehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeeE
Confidence 99999999998876543333333333333444444431111 224455555666666666553 23334466789
Q ss_pred EEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 217 FNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
++|+.++... ..+..++++.|+ ++||.+.|+ +.+++|++. ..+.+++++++++|++.+
T Consensus 324 f~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 324 YVWAKLPEPW-QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFAL--VHDPDILEEAVERIAAFL 388 (388)
T ss_pred EEEEECCccc-CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHhC
Confidence 9999887410 123567887775 669999985 247999995 457899999999998753
No 111
>PRK08175 aminotransferase; Validated
Probab=99.90 E-value=1.7e-22 Score=184.35 Aligned_cols=268 Identities=14% Similarity=0.184 Sum_probs=180.5
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHHHHHHHhcCCcEEEEEEcc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITALEKIFKESGDQIAGFLFEP 68 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~le~~i~~~~~~~~~v~v~~ 68 (306)
+|++.+|+.+|-...+..+..+....-...|.++. +..++.+ ++++++++++++.+++++++++.
T Consensus 93 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~ 172 (395)
T PRK08175 93 EAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGF 172 (395)
T ss_pred cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeC
Confidence 58888888888766655554433322222333332 1233332 47889998886545788999888
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccC---CCCCcEEEeccccc-CCcccceeeE
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE---EVRPDMVILGKALG-GGVIPVSAVL 142 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~---~~~~d~~s~sK~~~-~G~~~~g~~~ 142 (306)
++|++|.. .+.+.+++|.++|++||+++|+||+|.++...+... +. ... +....+.||||.++ +|+ |+||++
T Consensus 173 p~NPtG~~-~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGl-RiG~~~ 250 (395)
T PRK08175 173 PSNPTAQC-VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGW-RIGFMV 250 (395)
T ss_pred CCCCCCCC-CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcch-hheeee
Confidence 88999855 579999999999999999999999998764444321 11 111 12223459999997 899 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
+++++++.+........++.+.+.+.++..+++.... +.+.+.++++.+.+.+.|+.. ++....+..|+++|+
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~p~~g~~i~i 325 (395)
T PRK08175 251 GNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-----GWMVEMPKASMYVWA 325 (395)
T ss_pred CCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCEEEEEEE
Confidence 9999998876544334455566666666666643211 223445555666666666654 132234557899999
Q ss_pred EEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 221 EFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+++.....++.++++.++ ++||.+.|+ +++++|++. ..+.+.+.+++++|.+.+. +.
T Consensus 326 ~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l~-~~ 390 (395)
T PRK08175 326 KIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMFR-AD 390 (395)
T ss_pred ECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-hc
Confidence 9875211124678888776 679999985 246899995 4678999999999999987 43
No 112
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.90 E-value=9.8e-23 Score=185.43 Aligned_cols=264 Identities=15% Similarity=0.186 Sum_probs=176.8
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
.|++..|+-+|-.....++..+.+..-...|.++. ++.++. .|++.+++.++ ++++++++.
T Consensus 91 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~ 167 (389)
T PRK05957 91 AIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT---PKTRAIVTI 167 (389)
T ss_pred eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC---cCceEEEEe
Confidence 57777777776654444433322222112233322 122222 27899999886 468888888
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cCCCCCcEEEeccccc-CCcccceee
Q 021893 68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WEEVRPDMVILGKALG-GGVIPVSAV 141 (306)
Q Consensus 68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~~~~~d~~s~sK~~~-~G~~~~g~~ 141 (306)
+++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+... +. . .......+.|+||.++ +|+ |+||+
T Consensus 168 ~p~NPtG~~-~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~ 245 (389)
T PRK05957 168 SPNNPTGVV-YPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW-RIGYM 245 (389)
T ss_pred CCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc-eeEEE
Confidence 899999965 478899999999999999999999999775443221 11 1 1112234558999998 999 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCc-eeeEEEeeeEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGRGLFN 218 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~g~~~ 218 (306)
++++++++.+.........+.+.+.+.++..+++.-. -++..+.++++++.+.+.|+... +. ....+..|.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~gg~~~ 321 (389)
T PRK05957 246 VIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQ----DRCTLHPANGAFYC 321 (389)
T ss_pred ecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcC----CCccccCCCeeEEE
Confidence 9999999888764444444556667777666664311 12234455566666666665531 11 22334567888
Q ss_pred EEEEecCCChhhHHHHHHHHH-HCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 219 AVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|+.++. +.++.++++.|+ ++||.+.|+. ++++|++.+ ..+++++++++++|.+.++ .+
T Consensus 322 ~~~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~-~~ 386 (389)
T PRK05957 322 FLKVNT---DLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG-ALQKATAKEGIERLVQGLK-TI 386 (389)
T ss_pred EEeCCC---CCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHH-hh
Confidence 888764 356788999987 5799999862 469999953 3478899999999999887 54
No 113
>PRK08068 transaminase; Reviewed
Probab=99.90 E-value=1.1e-22 Score=185.19 Aligned_cols=258 Identities=13% Similarity=0.120 Sum_probs=169.5
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+.++-...+..+..+....-...|.++. +..+|. .|++++++.+. +++++++
T Consensus 96 ~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~ 172 (389)
T PRK08068 96 EVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA---EKAKLMY 172 (389)
T ss_pred cEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc---ccceEEE
Confidence 57888888887766555554433322222333332 123333 25778887775 3577888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccCC---CCCcEEEeccccc-CCcccce
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEE---VRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~~---~~~d~~s~sK~~~-~G~~~~g 139 (306)
++.++|++|.+ .+.+.+++|.++|++|++++|+||+|.++.+.+. ..+. ...+ ....+.||||.++ +|+ |+|
T Consensus 173 l~~P~NPTG~~-~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG 250 (389)
T PRK08068 173 LNYPNNPTGAV-ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW-RVA 250 (389)
T ss_pred EECCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc-eeE
Confidence 88778999964 6899999999999999999999999987655442 2111 1111 2234459999997 999 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
|+++++++++.+.........+.+++.+.++..++..... +...+.++++++.+.+.|++.+ +....+..|.+
T Consensus 251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g-----~~~~~~~g~~~ 325 (389)
T PRK08068 251 FAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG-----WEVDAPKGSFF 325 (389)
T ss_pred eEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCeeEE
Confidence 9999999988876543322233344455555555532111 2345566666666666665542 22233455677
Q ss_pred EEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 218 NAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
+|+.+++ ..++.++++.|++ +||.+.|+ +.+++|++. ..+++.+..++++|+++
T Consensus 326 ~~v~~~~---~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 326 AWMPVPK---GYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL--LTDEERLREAVERIGKL 386 (389)
T ss_pred EEEECCC---CCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEE--cCCHHHHHHHHHHHHHh
Confidence 8888864 3467889999986 59999874 257999995 45677888888888753
No 114
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.6e-22 Score=184.34 Aligned_cols=258 Identities=16% Similarity=0.211 Sum_probs=171.2
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+.+|-...+..+..+.+..-...|.|+. ++.++. .|++++++.+. +++++++
T Consensus 99 ~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~ 175 (394)
T PRK05942 99 EALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA---QQAKILY 175 (394)
T ss_pred eEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc---ccceEEE
Confidence 36667777777666655554433332222344433 122222 36888888886 4788999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cc---ccc-CCCCCcEEEeccccc-CCcccce
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LA---SDW-EEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~---~~~-~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++++|++|.+ .+.+.+++|.++|++||+++|+||+|..+.+.+.. .+ .+. .+....+.||||.++ +|+ |+|
T Consensus 176 l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl-RiG 253 (394)
T PRK05942 176 FNYPSNPTTAT-APREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW-RVG 253 (394)
T ss_pred EcCCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhh-hee
Confidence 88889999955 68999999999999999999999999876544321 11 111 122344569999997 999 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
|+++++++++.+........++.+.+.+.++..+++.... ++..++++++.+.+.+.|+.. +.....+..|.+
T Consensus 254 ~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~f 328 (394)
T PRK05942 254 FVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-----GWNIPPTKATMY 328 (394)
T ss_pred eeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCeecCCCeeeE
Confidence 9999999998887644444555667777777777753322 234555666666666666553 122233456778
Q ss_pred EEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
+|+.++. ..+..+++..++ ++||.+.|+ +.+++|+++. .+.+.+.+++++|.++
T Consensus 329 ~~~~~~~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 329 LWVPCPV---GMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQA 389 (394)
T ss_pred EEEECCC---CCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 8888864 234567776554 679999874 2579999964 4566677777766543
No 115
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.90 E-value=1.7e-22 Score=184.30 Aligned_cols=257 Identities=12% Similarity=0.047 Sum_probs=172.2
Q ss_pred eEEEEecCCCCcccchhcccCC---ccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCD---NEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIA 62 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~---~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~ 62 (306)
.|++..|+.+|-...+..+..+ ....-...|.++. ++.+|. .|++.+++.+. ++++
T Consensus 92 ~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k 168 (396)
T PRK09147 92 QVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW---ARTQ 168 (396)
T ss_pred eEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh---hccE
Confidence 6888899998877776666554 3222223344433 233332 36788888776 3678
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--ccc-c---ccC-----CCCCcEEEecccc
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLA-S---DWE-----EVRPDMVILGKAL 131 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~-~---~~~-----~~~~d~~s~sK~~ 131 (306)
+++++.++|++|.+ .+++.+++|.++|++|+++||+||+|..+.+.+. ..+ . ... +....+.||||.+
T Consensus 169 ~i~l~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 247 (396)
T PRK09147 169 LLFVCSPGNPTGAV-LPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS 247 (396)
T ss_pred EEEEcCCCCCcCcc-CCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEecccccc
Confidence 88888889999965 5899999999999999999999999997644432 111 0 011 1122344999988
Q ss_pred c-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893 132 G-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVK 209 (306)
Q Consensus 132 ~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 209 (306)
+ +|+ |+||+++++++++.+.......+++.+.+.+.++.+++..-. -.+..+.++++++.+.+.|.+. + ..
T Consensus 248 ~~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~---~~ 320 (396)
T PRK09147 248 NVPGL-RSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---L---DV 320 (396)
T ss_pred CCccc-eeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh---c---CC
Confidence 6 899 999999999998887654433445566777766665552110 0112344444445555554442 1 12
Q ss_pred eEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 210 EVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 210 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
..+..|.++|+.++ ....++++.|+ ++||.+.|+. .+++|++. ..+++++++++++|+++
T Consensus 321 ~~p~~g~f~~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~ 393 (396)
T PRK09147 321 QLPDAGFYLWAKVP-----GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIAL--VAPLAECVEAAERIVDF 393 (396)
T ss_pred CCCCeeEEEEEECC-----CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHH
Confidence 34567889999876 13567888886 6799997751 47899994 45788999999999987
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
++
T Consensus 394 ~~ 395 (396)
T PRK09147 394 CR 395 (396)
T ss_pred hc
Confidence 75
No 116
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.2e-22 Score=181.64 Aligned_cols=219 Identities=17% Similarity=0.246 Sum_probs=154.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc-CCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW-EEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~ 124 (306)
|++.+++.++ ++++++++++++|++|.. .+.+.+++|.++|+++|+++|+||+|.+|.. +....... .....++
T Consensus 146 d~~~l~~~~~---~~~~~v~l~~p~NptG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~ 220 (380)
T PRK06225 146 TPELVKENMD---ENTRLIYLIDPLNPLGSS-YTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTS 220 (380)
T ss_pred CHHHHHhhcC---CCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEE
Confidence 6788888886 467888777778888865 4788999999999999999999999987632 22111111 1223346
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHH----HHHHHHHHHHHHH
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERS----AHLGEELRQHLFK 199 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~----~~~~~~l~~~L~~ 199 (306)
.||||.++ +|+ |+||+++++++++.++... ...++.+.+++.++..+++.. +++.+++ +++.+.+.+.|++
T Consensus 221 ~s~SK~~g~~G~-RiG~i~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~ 296 (380)
T PRK06225 221 YSFSKIFGMAGL-RIGAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDE 296 (380)
T ss_pred eechhhcCCccc-eeEEEecCHHHHHHHHHHH-hcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 69999998 899 9999999999998876532 234566777777777666532 2233333 3444444445544
Q ss_pred HHhhCCCc-eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893 200 IQQQFPNY-VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSK 271 (306)
Q Consensus 200 ~~~~~~~~-~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~ 271 (306)
+ ++. ....+..|.++|+.++.. ..+..++++.|.++||.+.++ +.+++|++. ..++++++++++
T Consensus 297 ~----~~~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~--~~~~e~l~~~~~ 368 (380)
T PRK06225 297 I----EGVFLPVYPSHGNMMVIDISEA--GIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSF--SIPREQVEVFCE 368 (380)
T ss_pred C----cCCccccCCCCCeEEEEEcccc--cCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEe--CCCHHHHHHHHH
Confidence 3 111 122345677888887642 246788999999999999874 346899994 568999999999
Q ss_pred HHHHHHhhhcC
Q 021893 272 ALHDVLELDLP 282 (306)
Q Consensus 272 ~l~~~l~~~~~ 282 (306)
+|+++++ .++
T Consensus 369 ~l~~~~~-~~~ 378 (380)
T PRK06225 369 EFPDVVE-TLR 378 (380)
T ss_pred HHHHHHH-Hhh
Confidence 9999998 654
No 117
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=1.9e-22 Score=183.26 Aligned_cols=257 Identities=15% Similarity=0.222 Sum_probs=168.2
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+-+|-...+..+..+.+..-...|.++. +..+|. .|++++++.+. +++++++
T Consensus 93 ~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~ 169 (383)
T TIGR03540 93 EVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA---KKAKLMF 169 (383)
T ss_pred eEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc---ccceEEE
Confidence 46666777777666555554433322222233332 122222 26788888776 4688888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccC---CCCCcEEEeccccc-CCcccce
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWE---EVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~---~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+. ..+. ... .....+.||||.++ +|+ |+|
T Consensus 170 i~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG 247 (383)
T TIGR03540 170 INYPNNPTGAV-APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW-RIG 247 (383)
T ss_pred EeCCCCCcCcc-CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccc-eee
Confidence 88788999955 5899999999999999999999999997644432 1111 111 22234559999997 899 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
|+++++++++.+...........+.+.+.++..+++.... ++..+.++++++.+.+.|++. +.....+..|.+
T Consensus 248 ~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~~ 322 (383)
T TIGR03540 248 MAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-----GIDVEKPKATFY 322 (383)
T ss_pred EEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCEecCCCcceE
Confidence 9999999988776433223334455666666666643211 223445555566666666553 122233445777
Q ss_pred EEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+|+.+++ ..+..++++.|+ ++||.+.|+ +.+++|++. ..+++++++++++|++
T Consensus 323 ~~~~l~~---~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 323 VWVPVPE---GYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TVPDERLEEAVARIKK 382 (383)
T ss_pred EEEECCC---CCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cCCHHHHHHHHHHHhh
Confidence 8888764 346778999876 679999985 257999995 4678888888888764
No 118
>PRK07179 hypothetical protein; Provisional
Probab=99.90 E-value=6e-22 Score=181.34 Aligned_cols=257 Identities=16% Similarity=0.212 Sum_probs=178.2
Q ss_pred eEEEEecCCCCcccchhcccCCcc--ccccCCC--C-----CCC--cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNE--AIRGFGP--L-----LPG--HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE 72 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~--~~~~~~~--~-----~~~--~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~ 72 (306)
+++++++|+.+...+..++..+.. ....+.. . ..+ +..++++|++.|+++++++ ++++|++++++++
T Consensus 116 ~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~--~~~lV~v~~v~n~ 193 (407)
T PRK07179 116 SCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERH--GPGIIVVDSVYST 193 (407)
T ss_pred cEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhc--CCeEEEECCCCCC
Confidence 567788888876655544443221 1111000 0 011 2455668999999999852 4789999999999
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccCCC--CCcEE--EecccccCCcccceeeEeCHH
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKE 146 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~ 146 (306)
+|.+.+ +++|.++|++||++||+||+|+. ++..|..+ +..+++ .+|++ |++|+++ . ++|+++++++
T Consensus 194 tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~vdi~~~S~sK~~g--~-~~G~l~~~~~ 265 (407)
T PRK07179 194 TGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGL-VAELGLTSRVHFITASLAKAFA--G-RAGIITCPRE 265 (407)
T ss_pred CCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHhcCCCCCCCEEEeechHhhh--c-cCeEEEeCHH
Confidence 999998 99999999999999999999982 34445433 333443 23654 6789996 3 6888999998
Q ss_pred HHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 147 VMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 147 ~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+++.+...... ...+.++..++++.++++.+... +..++++++++++++.|++++ + .+.+.+.++++.++
T Consensus 266 ~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g--~-----~v~~~~~i~~l~~~ 338 (407)
T PRK07179 266 LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG--Y-----NIRSESQIIALETG 338 (407)
T ss_pred HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--C-----CCCCCCCEEEEEeC
Confidence 87766532111 11222345555566777777553 467889999999999998862 1 12245677777765
Q ss_pred cCCChhhHHHHHHHHHHCCceec----cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 224 KTALPVSAYDICLKMKERGILAK----PT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~----~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
. ......+.+.|.++||.+. |. ..+.+|++++..+|++|+++++++|+++++ +.
T Consensus 339 ~---~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~-~~ 399 (407)
T PRK07179 339 S---ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARD-EV 399 (407)
T ss_pred C---HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-hh
Confidence 3 2356778899999999733 32 357899999999999999999999999888 53
No 119
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.90 E-value=4.1e-22 Score=183.99 Aligned_cols=267 Identities=22% Similarity=0.244 Sum_probs=199.3
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHHHHHHHhcCCcEEEEEEc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~le~~i~~~~~~~~~v~v~ 67 (306)
..|++.+|+.++-...+..+..+.+......|.|++ ++.+|.+ |++.||+.++++ ++++++++
T Consensus 156 ~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~--~~k~~y~~ 233 (459)
T COG1167 156 EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQW--KPKAVYVT 233 (459)
T ss_pred CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhc--CCcEEEEC
Confidence 369999999999888888888776666666677766 2444443 799999999975 78899998
Q ss_pred cc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----cccccCCCCCcEEEecccccCCcccceeeE
Q 021893 68 PI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 68 ~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
|. +|++| .+.+.+.-++|.++|++||+++|.|+.|+.+.+.+.. .+.+..+....+.||||.+.+|+ |+||++
T Consensus 234 P~~qNPtG-~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl-RlG~vv 311 (459)
T COG1167 234 PTFQNPTG-VTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGL-RLGYVV 311 (459)
T ss_pred CCCCCCCC-CccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhccccc-ceeeee
Confidence 85 66677 4568999999999999999999999999987555442 22344455666779999999999 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH---hh-CC-CceeeEEEeeeE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ---QQ-FP-NYVKEVRGRGLF 217 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~-~~-~~~~~~~~~g~~ 217 (306)
+++++++.+....+....+.+.+.+.+...-+. +..+.+++++.++.++++.+.+. .. .+ ......+..|++
T Consensus 312 ~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~f 388 (459)
T COG1167 312 APPELIEKLLRLKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLF 388 (459)
T ss_pred CCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEE
Confidence 999999988877677777777777666655443 22244444444444433333221 11 12 233455567999
Q ss_pred EEEEEecCCChhhHHHHHHHHHHCCceecc-C--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 218 NAVEFDKTALPVSAYDICLKMKERGILAKP-T--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+|+.+++ ..+..++.+.++++|+.+.| + ..+++|++++ ..+.+++++++.+|.+.+. +.
T Consensus 389 lwl~l~~---~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~-~~ 456 (459)
T COG1167 389 LWLELPE---GIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFS-SPSEEEIEEGIKRLAALLR-EA 456 (459)
T ss_pred EEEEcCC---CCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHH-HH
Confidence 9999996 56788999999999999998 3 2458999975 4468999999999999987 54
No 120
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=3.8e-22 Score=182.82 Aligned_cols=224 Identities=22% Similarity=0.295 Sum_probs=162.4
Q ss_pred ccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-cccccccccc
Q 021893 40 LKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASD 116 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~ 116 (306)
..++++|++.+++.++... +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ |+ +..|..+ ..
T Consensus 157 ~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~ 231 (410)
T PRK13392 157 QVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AE 231 (410)
T ss_pred EEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hh
Confidence 4456788989998887643 47899999999999999988 9999999999999999999998 53 4555443 23
Q ss_pred cCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHH
Q 021893 117 WEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE-KLAERSAHL 189 (306)
Q Consensus 117 ~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~ 189 (306)
..++ .+|++ |+||+++. ..||+++++++++.++..... .+...+++.++++.++++.+... ...++++++
T Consensus 232 ~~~~~~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~ 308 (410)
T PRK13392 232 RDGLMDRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDR 308 (410)
T ss_pred hccCCCCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3232 34555 99999972 114588899988866543322 23345667788888999877643 245667788
Q ss_pred HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCCCCC
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSI 261 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~~~~ 261 (306)
++++++.|++++.. ..+..+.++.+.+.. .....++++.|+ ++||.+.+. +..++|++++..+
T Consensus 309 ~~~l~~~L~~~g~~------~~~~~~~~~~i~~~~---~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~ 379 (410)
T PRK13392 309 VAALKAKLNANGIP------VMPSPSHIVPVMVGD---PTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLH 379 (410)
T ss_pred HHHHHHHHHHcCCC------CCCCCCCEEEEEeCC---HHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCC
Confidence 88888888875322 112344555554432 234678999997 579999863 3368999999999
Q ss_pred CHHHHHHHHHHHHHHHhhhc
Q 021893 262 SSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++|++.++++|+++++ ++
T Consensus 380 t~edid~l~~aL~~~~~-~~ 398 (410)
T PRK13392 380 DDEDIDALVAALVAIWD-RL 398 (410)
T ss_pred CHHHHHHHHHHHHHHHH-Hc
Confidence 99999999999999988 64
No 121
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.90 E-value=2e-22 Score=183.20 Aligned_cols=257 Identities=14% Similarity=0.196 Sum_probs=168.1
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+.+|-......+..+.+..-...|.++. ++.+|. .|++++++.+. +++++++
T Consensus 95 ~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~ 171 (385)
T PRK09276 95 EVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMF 171 (385)
T ss_pred cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEE
Confidence 36666888877666655554443332222344433 122222 25777777765 4688888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-cc---CCCCCcEEEeccccc-CCcccce
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DW---EEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~---~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++++|++|.+ .+.+.+++|.++|++|++++|+||+|.++...+... +. .. .+....+.||||.++ +|+ |+|
T Consensus 172 l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG 249 (385)
T PRK09276 172 INYPNNPTGAV-ADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW-RIG 249 (385)
T ss_pred EeCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcch-hhe
Confidence 88889999965 589999999999999999999999999764443211 11 11 122344569999997 899 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
|+++++++++.+...........+.+.+.++..+++.... ++..++++++++.+.+.|++. +.....+..|.+
T Consensus 250 ~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~ 324 (385)
T PRK09276 250 FAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-----GLEVEPPKATFY 324 (385)
T ss_pred eeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCcceE
Confidence 9999999988876533323333455666666666642111 223445555556666666553 122223345677
Q ss_pred EEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+|+.+++ ..+..++++.|+ ++||.+.|+ +++++|++. ..+++++.+++++|.+
T Consensus 325 ~~v~~~~---~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 325 VWAPVPK---GYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIAL--TVPDERIEEAVERIKK 384 (385)
T ss_pred EEEECCC---CCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHhh
Confidence 8888764 346778999887 579999986 257999995 4678888888888754
No 122
>PRK08912 hypothetical protein; Provisional
Probab=99.90 E-value=2.6e-22 Score=182.66 Aligned_cols=263 Identities=19% Similarity=0.222 Sum_probs=176.1
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v 66 (306)
.|++..|+.++..........+....-...|.++. ++.++. .|++.+++.+. ++++++++
T Consensus 89 ~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l 165 (387)
T PRK08912 89 EVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS---PRTKAVLL 165 (387)
T ss_pred cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC---ccceEEEE
Confidence 68888888888765555554433322222233332 122332 26788988886 46788888
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccCC---CCCcEEEeccccc-CCccccee
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEE---VRPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~~---~~~d~~s~sK~~~-~G~~~~g~ 140 (306)
+.++|++|.+ .+.+.+++|.++|++|++++|+||+|.++...+..+ + ....+ ....+.|+||.++ +|+ |+||
T Consensus 166 ~~p~NPtG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~ 243 (387)
T PRK08912 166 NNPLNPAGKV-FPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KVGF 243 (387)
T ss_pred eCCCCCcCcc-cCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc-eeEE
Confidence 8889999965 578999999999999999999999998764443211 1 11112 2233458999999 999 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
+++++++++.+........++.++..+.++..++....+ ++..++++++.+.+.+.|+..+ .....+..|.++
T Consensus 244 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~g~~~l 318 (387)
T PRK08912 244 VCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-----FPVLPSQGTYFL 318 (387)
T ss_pred EecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccCCCcceEE
Confidence 999999988876544444455566566666555532111 2345666666666766666542 222234456778
Q ss_pred EEEEecCCChhhHHHHHHHHH-HCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 219 AVEFDKTALPVSAYDICLKMK-ERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|+.++......+..++++.|+ ++||.+.|+ ..+++|++.. .+++++++++++|.+.++
T Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 319 TVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARR 385 (387)
T ss_pred EecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 888764211235778999986 569998874 1479999954 568999999999998876
No 123
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.1e-22 Score=184.00 Aligned_cols=267 Identities=15% Similarity=0.191 Sum_probs=176.7
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++.+|+-++-...+.....+....-...|.|+. ++.+|. .|++.+++.+. +++++++
T Consensus 108 ~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~ 184 (410)
T PRK06290 108 EVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK---EKAKLLY 184 (410)
T ss_pred eEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc---ccceEEE
Confidence 58888888888666655555443333233344443 122222 26888888776 4688888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccC---CCCCcEEEeccccc-CCccccee
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWE---EVRPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~---~~~~d~~s~sK~~~-~G~~~~g~ 140 (306)
+++++|++|.+ .+.+.+++|.++|++||++||+||+|.++.+.+...++ ... +....+.||||.++ +|+ |+||
T Consensus 185 l~nP~NPTG~v-~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl-RiG~ 262 (410)
T PRK06290 185 LNYPNNPTGAV-ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW-RLAF 262 (410)
T ss_pred EECCCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchh-heEe
Confidence 88779999965 58999999999999999999999999976443322111 111 12233459999997 999 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
+++++++++.+.........+.+.+.+.++..+++... .++..++++++++.+.+.|++. +.....+..|.++|
T Consensus 263 ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~g~f~l~ 337 (410)
T PRK06290 263 VVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-----GFKAEMPGGTFYLY 337 (410)
T ss_pred EEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-----CCeecCCCeeeEEE
Confidence 99999998887654433444445566666666664311 1224555566666666666654 12223345677778
Q ss_pred EEEecCCC----hhhHHHHHHHHHHCCc-eeccC--CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhc
Q 021893 220 VEFDKTAL----PVSAYDICLKMKERGI-LAKPT--HDTIVRLTPPL-SISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 220 i~~~~~~~----~~~~~~~~~~l~~~Gi-~~~~~--~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.++.... ..+..++++.|+++|+ .+.|+ ..+++|++... ..++++.++++++|++.|. ++
T Consensus 338 v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~-~~ 406 (410)
T PRK06290 338 VKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLS-DV 406 (410)
T ss_pred EECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHh-hc
Confidence 88764210 0257789999999864 44454 24689999532 2478889999999999988 54
No 124
>PRK12414 putative aminotransferase; Provisional
Probab=99.89 E-value=4.8e-22 Score=180.61 Aligned_cols=259 Identities=14% Similarity=0.145 Sum_probs=170.9
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v 66 (306)
.|++..|+.+|-...+.++..+.+..-...|.++. +..++. .|++.|++.++ ++++++++
T Consensus 92 ~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~i 168 (384)
T PRK12414 92 EVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT---PRTRMIIV 168 (384)
T ss_pred cEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC---cccEEEEE
Confidence 57777887777655555554433222222233222 122222 26888888886 46888888
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCC---CCcEEEeccccc-CCccccee
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEV---RPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~---~~d~~s~sK~~~-~G~~~~g~ 140 (306)
++++|++|.+ .+++.+++|.++|++||+++|+||+|..+...+... +. ...+. ...+.||||.++ +|+ |+||
T Consensus 169 ~~p~NPTG~~-~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RiG~ 246 (384)
T PRK12414 169 NTPHNPSATV-FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RVGY 246 (384)
T ss_pred cCCCCCCCcC-CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eEEE
Confidence 8889999965 578999999999999999999999999765444321 11 11111 223449999998 999 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
+++++++++.+........++.+.+.+.++...++.-. ..+..+.++++++.+.+.|++.+ .....+..|.++|
T Consensus 247 ~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~~~~~~gg~~~~ 321 (384)
T PRK12414 247 CLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-----FELLPSEGSFFML 321 (384)
T ss_pred EecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-----CeecCCCcceEEE
Confidence 99999998887765444566777788877776664311 11244566666666666666541 2223344667777
Q ss_pred EEEecCCChhhHHHHH-HHHHHCCceeccCC--------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 220 VEFDKTALPVSAYDIC-LKMKERGILAKPTH--------DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~--------~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+.++... .....+++ +.|.++||.+.|+. .+++|++.. .+++++++++++|.+
T Consensus 322 ~~~~~~~-~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 322 ARFRHFS-DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred EcccccC-CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 7765311 12344566 55667899999851 468999954 578999999998864
No 125
>PRK08960 hypothetical protein; Provisional
Probab=99.89 E-value=9.2e-22 Score=178.99 Aligned_cols=259 Identities=16% Similarity=0.108 Sum_probs=170.9
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+.+|-...+.....+.+..-...|.++. +..++. .|++.+++.++ +++++++
T Consensus 94 ~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~ 170 (387)
T PRK08960 94 RILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN---ADTVGAL 170 (387)
T ss_pred hEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC---ccceEEE
Confidence 46677777777655555444433322222333332 112221 26888888877 4567777
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc---EEEeccccc-CCcccceee
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAV 141 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~g~~ 141 (306)
+..++|++|.+ .+.+.+++|+++|++||+++|+||+|.++...+... ......++ +.|+||.++ +|+ |+||+
T Consensus 171 i~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~ 246 (387)
T PRK08960 171 VASPANPTGTL-LSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVLNSFSKYFGMTGW-RLGWL 246 (387)
T ss_pred EECCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEEeecccccCCccc-EEEEE
Confidence 77778899965 579999999999999999999999998764433221 11222333 348999998 999 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLF 217 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~ 217 (306)
++++++++.+.........+.+.+.+.++.++++.-.. .+..+.++++++.+.+.|++. +... ..+..|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~p~g~~f 321 (387)
T PRK08960 247 VAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-----GFGIAVEPQGAFY 321 (387)
T ss_pred EcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcCCcCCCeeEE
Confidence 99999988876544444556677887777777642100 123344455555555555543 1221 23556888
Q ss_pred EEEEEecCCChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+|+.+++. ..+..++++.|+ ++||.+.|+ .++++|++.. .+.+.+..++++|.++++
T Consensus 322 ~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 322 LYADISAF--GGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QSLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEecccc--CCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 89888641 134678888876 579999985 2469999965 478889999999988765
No 126
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.89 E-value=7.5e-22 Score=177.22 Aligned_cols=257 Identities=15% Similarity=0.116 Sum_probs=168.5
Q ss_pred eEEEEecCCCCcccchhcccCCc---cccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDN---EAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIA 62 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~---~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~ 62 (306)
.|+..+|+-++-...+..+..+. ...-...|.++. ++.++. -|++++++++++ +++
T Consensus 62 ~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~ 138 (350)
T TIGR03537 62 QVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE---ETK 138 (350)
T ss_pred cEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh---ccE
Confidence 57777777777666555554432 122222344433 122222 178999998873 688
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC--CCCCcEEEeccccc-CCcccce
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE--EVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~--~~~~d~~s~sK~~~-~G~~~~g 139 (306)
++++++++|++|.. .+.+.+++|.++|++||+++|+||+|..+...+...+.... +....+.|+||.++ +|+ |+|
T Consensus 139 ~i~i~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~Gl-RiG 216 (350)
T TIGR03537 139 IVWINYPHNPTGAT-APRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGY-RSG 216 (350)
T ss_pred EEEEeCCCCCcCcc-cCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccc-cce
Confidence 88888889999955 58999999999999999999999999865332222111111 11223448999997 899 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
|+++++++++.+.........+.+.+.+.++.+++..-. ..+...+++++.+.+.+.|+..+ .....+..|.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-----~~~~~~~g~~~~ 291 (350)
T TIGR03537 217 FVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVG-----LEYLYPDATFYL 291 (350)
T ss_pred eeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCeEEEE
Confidence 999999988877754333334445555566555543100 01234455555555555555431 222334567778
Q ss_pred EEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 219 AVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
|+.++. ..++.++++.|.++||.+.|+ ..+++|++. ..+++++++++++|++
T Consensus 292 ~~~~~~---~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 292 WVKVPS---GIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred EEECCC---CCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 888874 346788999999999999874 257899994 4678999999998865
No 127
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=3.3e-22 Score=180.73 Aligned_cols=253 Identities=16% Similarity=0.125 Sum_probs=166.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v 66 (306)
..|++..|+.++-......+..+....-...|.|+. ++.++. .|+++++++++++ +++++++
T Consensus 89 ~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~~i~l 166 (368)
T PRK03317 89 ENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEH--RPDVVFL 166 (368)
T ss_pred hhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhcc--CCCEEEE
Confidence 357777777777666666555543332223344432 111221 2789999998753 5667777
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE---Eeccccc-CCcccceeeE
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVL 142 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~g~~~ 142 (306)
++++|++|...+ .+++.++|+.++++||+||+|++|++.|........+..++++ ||||.++ +|+ |+||++
T Consensus 167 ~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG~~~ 241 (368)
T PRK03317 167 TSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG-RLGYLA 241 (368)
T ss_pred eCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh-hhhhhh
Confidence 788999998876 6666667776689999999999886555432222222334554 9999998 899 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
+++++++.+.... .++..+++++.++.++++.... .+..+++++..+.+.+.|+.. +........+.+++..
T Consensus 242 ~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~~ 314 (368)
T PRK03317 242 AAPAVVDALRLVR--LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-----GLRVAPSDANFVLFGR 314 (368)
T ss_pred CCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEeCCCCCcEEEEec
Confidence 9999998887533 3567788888888888865322 112233444444455544442 1222222333333322
Q ss_pred EecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 222 FDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+. +..++.+.|+++||.+.+.+ ++++|++. .+.++++.+++.|++++.
T Consensus 315 ~~------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~---~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 315 FA------DRHAVWQGLLDRGVLIRDVGIPGWLRVTI---GTPEENDAFLAALAEVLA 363 (368)
T ss_pred cC------CHHHHHHHHHHCCEEEEeCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 22 45789999999999998754 58999994 367889999999998876
No 128
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.89 E-value=1.9e-21 Score=176.68 Aligned_cols=222 Identities=24% Similarity=0.277 Sum_probs=162.6
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc-c
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS-D 116 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~-~ 116 (306)
..++.+|++.+++.++..++++++++++++++++|.+.+ +++|.++|++||+++|+||+|+ + ++..|..+.. .
T Consensus 148 ~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~ 223 (385)
T PRK05958 148 RRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEA 223 (385)
T ss_pred EEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhh
Confidence 445667999999999864345788899999999998877 9999999999999999999996 3 3333432211 0
Q ss_pred cCCCCCc---EEEecccccCCcccceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHH
Q 021893 117 WEEVRPD---MVILGKALGGGVIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDE-KLAERSAHLG 190 (306)
Q Consensus 117 ~~~~~~d---~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~ 190 (306)
.....++ +.|+||++++ +.||++.++++++.+... ....+...+++.++++.++++.+... ++.+++.+++
T Consensus 224 ~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~ 300 (385)
T PRK05958 224 GLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALI 300 (385)
T ss_pred CCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 1122344 5699999972 226788898888776432 12223345677777888888877653 5778888899
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCH
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISS 263 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~ 263 (306)
+++.+.|++.... .....|.++++.++. ..+..++++.|+++||.+.+. +.+++|++++..+++
T Consensus 301 ~~l~~~L~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~ 371 (385)
T PRK05958 301 ARLRAGLRALGFQ------LMDSQSAIQPLIVGD---NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTE 371 (385)
T ss_pred HHHHHHHHHcCCC------cCCCCCCEEEEEeCC---HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCH
Confidence 9999998876311 123456777877653 346778999999999999752 246899999988999
Q ss_pred HHHHHHHHHHHHHH
Q 021893 264 NELQEGSKALHDVL 277 (306)
Q Consensus 264 ~~i~~~~~~l~~~l 277 (306)
++++.++++|++++
T Consensus 372 ~~i~~~l~~l~~~~ 385 (385)
T PRK05958 372 ADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998753
No 129
>PRK09082 methionine aminotransferase; Validated
Probab=99.89 E-value=2.9e-22 Score=182.20 Aligned_cols=259 Identities=15% Similarity=0.191 Sum_probs=173.0
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v 66 (306)
.|++..|+.++-..+..+...+.+..-...|.++. ++.++. .|++++++.++ ++++++++
T Consensus 93 ~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l 169 (386)
T PRK09082 93 EITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS---PRTRLIIL 169 (386)
T ss_pred cEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC---ccceEEEE
Confidence 47777777777665555554433222222233322 223332 26888998886 46888888
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc-ccCCC---CCcEEEeccccc-CCccccee
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWEEV---RPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~-~~~~~---~~d~~s~sK~~~-~G~~~~g~ 140 (306)
++++|++|.. .+.+.+++|.++|++||+++|+||+|.++...+.. .+. ...+. ...+.||||.++ +|+ |+||
T Consensus 170 ~~p~NPtG~~-~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~ 247 (386)
T PRK09082 170 NTPHNPSGTV-WSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGW-KVGY 247 (386)
T ss_pred eCCCCCCCcC-CCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhh-hhhh
Confidence 8889999965 47899999999999999999999999876443321 111 12222 223449999997 899 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
+++++++++.++.......++.+.+.+.++...++.... +++.+.++++.+.+.+.|++.. ........|.++
T Consensus 248 iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-----~~~~~~~g~~~~ 322 (386)
T PRK09082 248 CVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-----FKLLPCEGTYFQ 322 (386)
T ss_pred hhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccCCCeeEEE
Confidence 999999998887654445566777777776666542111 2234555666666666666531 222334567788
Q ss_pred EEEEecCCChhhHHHHHHHH-HHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 219 AVEFDKTALPVSAYDICLKM-KERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
|+.+++.. ..+..++++.| .++||.+.|+ +.+++|++. ..+++++++++++|++
T Consensus 323 ~~~~~~~~-~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~--~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 323 LVDYSAIS-DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF--AKQEETLDAAAERLCQ 385 (386)
T ss_pred EEeccccC-CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe--cCCHHHHHHHHHHHhh
Confidence 88876311 24577899987 4669998875 147899995 4578899999998864
No 130
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.9e-22 Score=180.51 Aligned_cols=263 Identities=15% Similarity=0.161 Sum_probs=171.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++....+.++..+....-...|.++. +..+|. .|++++++.++ ++++++
T Consensus 94 ~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v 170 (391)
T PRK08361 94 DNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT---KRTRMI 170 (391)
T ss_pred ccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc---cccEEE
Confidence 367788888777665555554433222222233222 122222 37899998887 457788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC--CCCCcEEEeccccc-CCccccee
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE--EVRPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~--~~~~d~~s~sK~~~-~G~~~~g~ 140 (306)
++++++|++|.. .+.+.+++|.++|+++++++|+||+|.++...+.. .+.... .....+.|+||.++ +|+ |+||
T Consensus 171 ~i~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl-RiG~ 248 (391)
T PRK08361 171 VINYPNNPTGAT-LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGW-RLGF 248 (391)
T ss_pred EEeCCCCCCCcC-cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHh-hhhh
Confidence 888889999965 57889999999999999999999999876433321 111111 11223448999998 899 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
+++++++++.+........++.+.+.+.++..+++.... ++..+.++++.+.+.+.|+.+ ++.....+..|.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~p~g~~ 324 (391)
T PRK08361 249 VIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM----PHIKVFEPKGAF 324 (391)
T ss_pred hccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC----CCCeecCCCEEE
Confidence 999999888765433333445566777777666643211 122344444445455555442 222223345577
Q ss_pred EEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 217 FNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++|+.++.. ..+..++++.|++ +||.+.|+ +.+++|++.. .+++++++++++|++.++
T Consensus 325 ~~~~~l~~~--~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 325 YVFANIDET--GMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEEECCCC--CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 788888631 2457788888875 69999875 2479999954 578899999999998887
No 131
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=1.7e-21 Score=181.18 Aligned_cols=227 Identities=16% Similarity=0.183 Sum_probs=162.6
Q ss_pred cccccCCCHHHHHHHHHhc----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-c
Q 021893 39 HLKVDFGDITALEKIFKES----------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-L 106 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~----------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~ 106 (306)
+..++++|++++++.+++. +.+..+|+++++.+++|.+.+ +++|.++|++||++||+||+|+ | +
T Consensus 209 v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~ 284 (489)
T PLN02483 209 IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAV 284 (489)
T ss_pred EEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCcc
Confidence 4678889999999888742 112358889999999999988 9999999999999999999997 2 3
Q ss_pred cccccccccccCCCC---CcE--EEecccccCCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh
Q 021893 107 ARSGRMLASDWEEVR---PDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 107 ~~~g~~~~~~~~~~~---~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~ 179 (306)
+..|... .+.+++. .|+ .||||++++ ..||+++++++++.++.......+ ..++..++++.++++.+..
T Consensus 285 G~~G~g~-~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~ 360 (489)
T PLN02483 285 GKTGRGV-CELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILG 360 (489)
T ss_pred CCCCCch-HHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHh
Confidence 4444432 3333332 244 499999972 225699999999988764443333 2355666667788876642
Q ss_pred c-------cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----
Q 021893 180 E-------KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---- 248 (306)
Q Consensus 180 ~-------~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---- 248 (306)
+ +..++++++++++++.|++++.. ......+.+.++.+.. .....++++.|+++||.+.+.
T Consensus 361 ~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~-----v~~~~~sp~~~l~l~~---~~~~~~~~~~Ll~~GI~v~~~~fp~ 432 (489)
T PLN02483 361 EDGTNRGAQKLAQIRENSNFFRSELQKMGFE-----VLGDNDSPVMPIMLYN---PAKIPAFSRECLKQNVAVVVVGFPA 432 (489)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHCCCc-----ccCCCCCCEEEEEECC---HHHHHHHHHHHHHCCcEEeeeCCCC
Confidence 1 24567888888888888886311 1112233455665543 345668999999999998842
Q ss_pred ---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 249 ---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 249 ---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
..+.+|++++..+++++|++++++|+++++ .+.
T Consensus 433 ~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~-~~~ 468 (489)
T PLN02483 433 TPLLLARARICISASHSREDLIKALEVISEVGD-LVG 468 (489)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-HhC
Confidence 236899999999999999999999999988 653
No 132
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.89 E-value=1.6e-21 Score=177.94 Aligned_cols=225 Identities=22% Similarity=0.295 Sum_probs=160.1
Q ss_pred ccccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-cccccccc
Q 021893 40 LKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLA 114 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~ 114 (306)
..++++|++++++.++++ +.++++|+++++++++|...+ +++|.++|++||++||+||+|+ |+ +..|.. .
T Consensus 151 ~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~ 225 (397)
T PRK06939 151 YRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-T 225 (397)
T ss_pred EEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-H
Confidence 445667999999999752 236888998889999997766 9999999999999999999996 43 222321 1
Q ss_pred cccCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCccC--CCCCCHHHHHHHHHHHHHHhh-ccHHHHHH
Q 021893 115 SDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--TFGGNPLASAVAIASLDVIRD-EKLAERSA 187 (306)
Q Consensus 115 ~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~~al~~~~~-~~~~~~~~ 187 (306)
....++ .+|+. |+||+++ |+ ++||+++++++++.+....... ..+.++..++++.++++.+.. ++..++++
T Consensus 226 ~~~~~~~~~~~i~~~S~sK~~~-g~-r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 303 (397)
T PRK06939 226 VEHFGVMDRVDIITGTLGKALG-GA-SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLW 303 (397)
T ss_pred HHHcCCCCCCcEEEEECHHHhC-cc-CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 222232 34554 9999995 56 8899999999988876432211 122344456666777777654 35678888
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCC
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLS 260 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~ 260 (306)
++++.+++.|++.... ...+.+.++++.++. ..+..++++.|.++||.+.+. +.+++|++++..
T Consensus 304 ~~~~~l~~~L~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~ 374 (397)
T PRK06939 304 ENARYFREGMTAAGFT------LGPGEHPIIPVMLGD---AKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAA 374 (397)
T ss_pred HHHHHHHHHHHHcCCC------cCCCCCCEEEEEECC---HHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCC
Confidence 8888888888876311 112334444444432 345778999999999988642 246899998888
Q ss_pred CCHHHHHHHHHHHHHHHhhhc
Q 021893 261 ISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++++++++++++|+++++ ++
T Consensus 375 ~~~~~i~~~l~~L~~~~~-~~ 394 (397)
T PRK06939 375 HTKEQLDRAIDAFEKVGK-EL 394 (397)
T ss_pred CCHHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999988 54
No 133
>PRK07683 aminotransferase A; Validated
Probab=99.89 E-value=1.3e-21 Score=177.94 Aligned_cols=261 Identities=18% Similarity=0.217 Sum_probs=171.7
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC------CHHHHHHHHHhcCCcEEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG------DITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~------d~~~le~~i~~~~~~~~~v~v 66 (306)
.|++..|+.++-......+..+....-...|.++. +..++.+ |++.+++.++ ++++++++
T Consensus 91 ~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i 167 (387)
T PRK07683 91 EIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT---EKTRCVVL 167 (387)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC---cCceEEEE
Confidence 68888888888666655544332221112233322 1223221 5678888876 46788888
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-cc---CCCCCcEEEeccccc-CCcccceee
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DW---EEVRPDMVILGKALG-GGVIPVSAV 141 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~---~~~~~d~~s~sK~~~-~G~~~~g~~ 141 (306)
+.++|++|.. .+.+.+++|.++|+++|+++|+||+|.++...+...+. .. .+....+.|+||.++ +|+ |+||+
T Consensus 168 ~~p~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl-RiG~i 245 (387)
T PRK07683 168 PYPSNPTGVT-LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW-RIGFL 245 (387)
T ss_pred eCCCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc-eeEEE
Confidence 8889999965 58999999999999999999999999976443322211 11 122233459999999 999 99999
Q ss_pred EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
++++++++.+.........+.+.+++.++...++.... +...++++++++.+.+.|++. +.....+..|.++|
T Consensus 246 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~ 320 (387)
T PRK07683 246 FAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-----GLDVEKPTGAFYLF 320 (387)
T ss_pred EcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCeeEEEE
Confidence 99999988876533222334456676666666643211 223455556666666666553 12223345666777
Q ss_pred EEEecCCChhhHHHHHHHH-HHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 220 VEFDKTALPVSAYDICLKM-KERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..++.. ..+..+++..+ .++||.+.|+ +++++|++.. .+++++.+++++|.++++
T Consensus 321 ~~~~~~--~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 321 PSIGHF--TMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EecccC--CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 766531 23456777665 5679999885 2589999954 578999999999999887
No 134
>PRK07777 aminotransferase; Validated
Probab=99.89 E-value=7.6e-22 Score=179.59 Aligned_cols=220 Identities=15% Similarity=0.209 Sum_probs=153.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc----CCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW----EEV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~----~~~ 120 (306)
|++++++.++ +++++|++++++|++|.. .+.+.+++|.++|++|++++|+||+|.++...+.. .+... .+.
T Consensus 148 d~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK07777 148 DLDALRAAVT---PRTRALIVNSPHNPTGTV-LTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRER 223 (387)
T ss_pred CHHHHHHhcC---cccEEEEEcCCCCCCCcc-CCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCc
Confidence 6888888886 467888888889999965 47899999999999999999999999876543321 11111 112
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
...+.|+||.++ +|+ |+||+++++++++.+........+..+.+.+.++..+++.... +...+.++++++.+.+.|
T Consensus 224 ~i~~~S~SK~~g~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 302 (387)
T PRK07777 224 TVTISSAAKTFNVTGW-KIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGL 302 (387)
T ss_pred EEEEeechhhccCcCc-eeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 223459999998 899 9999999999888776544444555555666555555542111 224556666666666666
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC---------CCEEEEeCCCCCCHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH---------DTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~---------~~~lRi~~~~~~t~~~i~ 267 (306)
+... +....+..+.++|+.++..+ ..++.++++.|+ ++||.+.|+. .+++|++. ..++++++
T Consensus 303 ~~~~-----~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~--~~~~~~l~ 374 (387)
T PRK07777 303 AEAG-----FEVHDSAGTYFLCADPRPLG-YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF--CKRDDTLD 374 (387)
T ss_pred HhCC-----CCccCCCcceEEEecccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe--cCCHHHHH
Confidence 6642 22223345677787765211 135688999997 5699998752 35899995 45799999
Q ss_pred HHHHHHHHHHh
Q 021893 268 EGSKALHDVLE 278 (306)
Q Consensus 268 ~~~~~l~~~l~ 278 (306)
+++++|++...
T Consensus 375 ~~l~~l~~~~~ 385 (387)
T PRK07777 375 EAIRRLRALRG 385 (387)
T ss_pred HHHHHHHHHhc
Confidence 99999987654
No 135
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=2.3e-21 Score=179.76 Aligned_cols=269 Identities=18% Similarity=0.150 Sum_probs=175.6
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc------------ccccC-------CCHHHHHHHHHhc---CCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH------------LKVDF-------GDITALEKIFKES---GDQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-------~d~~~le~~i~~~---~~~ 60 (306)
..|++..|+-++....+..+..+....-...|.|+.. +.++. .|++.+++++++. +.+
T Consensus 112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~ 191 (468)
T PLN02450 112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK 191 (468)
T ss_pred HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 3588889999987777777766554433334555441 22232 1568898888752 246
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-ccc-----------CCCCCcEEEe
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDW-----------EEVRPDMVIL 127 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~-----------~~~~~d~~s~ 127 (306)
+++++++.++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+..+ + .+. .+....+.||
T Consensus 192 ~k~v~l~nP~NPTG~~-~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~ 270 (468)
T PLN02450 192 VKGVLITNPSNPLGTT-TTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSL 270 (468)
T ss_pred eeEEEEecCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEec
Confidence 8888888889999955 689999999999999999999999999754444222 1 111 1112224499
Q ss_pred ccccc-CCcccceeeEeCHH-HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHHH
Q 021893 128 GKALG-GGVIPVSAVLADKE-VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-----DEKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 128 sK~~~-~G~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-----~~~~~~~~~~~~~~l~~~L~~~ 200 (306)
||.++ +|+ |+||++++++ +++.+..... ....+.+.+.++...++.-. -++..+++++..+.+.+.|++.
T Consensus 271 SK~~~l~Gl-RiG~li~~~~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 271 SKDLGLPGF-RVGAIYSNDEMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred cccCCCCCc-cEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998 999 9999999744 5555543221 12346677777766664311 0112344455555555555543
Q ss_pred HhhCCCceeeEEEeeeEEEEEEecCCC---hhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHH
Q 021893 201 QQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGS 270 (306)
Q Consensus 201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~ 270 (306)
+.....+..|+++|+.++..-. .....++++.|++ +||.+.|+ .++++|++... .+++++++++
T Consensus 348 -----gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l 421 (468)
T PLN02450 348 -----GIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAM 421 (468)
T ss_pred -----CCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHH
Confidence 2323345678899998863110 1123457777765 69999986 25799999432 4789999999
Q ss_pred HHHHHHHhhhcC
Q 021893 271 KALHDVLELDLP 282 (306)
Q Consensus 271 ~~l~~~l~~~~~ 282 (306)
++|+++++ +..
T Consensus 422 ~ri~~~l~-~~~ 432 (468)
T PLN02450 422 KRLKSFVE-SDS 432 (468)
T ss_pred HHHHHHHH-hcc
Confidence 99999998 554
No 136
>PRK06855 aminotransferase; Validated
Probab=99.88 E-value=1.8e-21 Score=179.31 Aligned_cols=225 Identities=16% Similarity=0.189 Sum_probs=146.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-cc--CCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DW--EEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~--~~~~ 121 (306)
|+++|++.++++ +++++++++.++|+||. +.+.+.+++|.++|++||++||+||+|.++.+.+..+ +. .. ....
T Consensus 158 d~~~l~~~~~~~-~~~~~i~l~~P~NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~ 235 (433)
T PRK06855 158 DLDDLENKVKYN-PSIAGILLINPDNPTGA-VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPG 235 (433)
T ss_pred CHHHHHHHHhcC-CCceEEEEECCCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCe
Confidence 789999999753 35666766677899985 5689999999999999999999999999875544321 11 11 1122
Q ss_pred CcEEEeccccc-CCcccceeeEeC-----H---HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHH
Q 021893 122 PDMVILGKALG-GGVIPVSAVLAD-----K---EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAH 188 (306)
Q Consensus 122 ~d~~s~sK~~~-~G~~~~g~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~ 188 (306)
..+.||||.++ +|+ |+||++++ + .+++.+..... ...+.+.+.+.++..+++.-.- ++..+.+++
T Consensus 236 I~~~S~SK~~~~pGl-RiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~ 313 (433)
T PRK06855 236 IALKGISKELPWPGS-RCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEK 313 (433)
T ss_pred EEEecCccccCCCcc-eEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Confidence 34559999997 999 99999872 2 33343332222 2334567777777766642110 112333444
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC---------C---------------hhhHHHHHHH-HHHCCc
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---------L---------------PVSAYDICLK-MKERGI 243 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---------~---------------~~~~~~~~~~-l~~~Gi 243 (306)
+.+.+.+.|+.. ++.....+..|.++|+.+++.. . ..+..+++.. +.++||
T Consensus 314 r~~~~~~~L~~~----~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV 389 (433)
T PRK06855 314 RSNIAYEKLKDV----PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGI 389 (433)
T ss_pred HHHHHHHHHhcC----CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCE
Confidence 444444444332 2223344567889999887520 0 0124566655 557799
Q ss_pred eeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893 244 LAKPTH-----DTIVRLTPPLSISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 244 ~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~ 280 (306)
.+.|+. ...+|++... .+.+++++++++|+++++ +
T Consensus 390 ~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~-~ 429 (433)
T PRK06855 390 CVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIE-E 429 (433)
T ss_pred EEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHH-H
Confidence 999861 2469999643 489999999999999987 5
No 137
>PLN02187 rooty/superroot1
Probab=99.88 E-value=2.7e-21 Score=179.04 Aligned_cols=273 Identities=17% Similarity=0.190 Sum_probs=172.6
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++-...+.++..+.+..-...|.|+. +..++. .|+++|+++++ ++++++
T Consensus 132 ~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v 208 (462)
T PLN02187 132 EDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAM 208 (462)
T ss_pred ccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEEE
Confidence 357788888877766666665543333333344443 122221 26899998886 456677
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-CC--CCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-EV--RPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-~~--~~d~~s~sK~~~-~G~~~~g 139 (306)
+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+..+ +...+ .. ...+.||||.++ +|+ |+|
T Consensus 209 ~i~nP~NPTG~v-~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl-RiG 286 (462)
T PLN02187 209 VVINPNNPCGNV-YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGW-KIG 286 (462)
T ss_pred EEeCCCCCCCCc-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccc-eeE
Confidence 777778999954 589999999999999999999999999865444322 12111 11 123348999987 999 999
Q ss_pred eeEeC-HH-H---HhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce-
Q 021893 140 AVLAD-KE-V---MLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV- 208 (306)
Q Consensus 140 ~~~~~-~~-~---~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~- 208 (306)
|++++ ++ + ++.+........+ ..+.+.+.++.++++.... ++..+.++++++.+.+.|++. +...
T Consensus 287 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~----~~~~~ 362 (462)
T PLN02187 287 WIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDI----PCVVC 362 (462)
T ss_pred EEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC----CCCcC
Confidence 99983 32 2 2233322122222 3467788887777753111 223445555556666666553 2121
Q ss_pred eeEEEeeeEEEEEEecCC-Chh-hHHHHHH-HHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 209 KEVRGRGLFNAVEFDKTA-LPV-SAYDICL-KMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 209 ~~~~~~g~~~~i~~~~~~-~~~-~~~~~~~-~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
...+..|+++|+.++... .+. +..+++. .+.++||.+.|+ ..++||++ +..+++++++++++|.++++ ..
T Consensus 363 ~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis--~~~~~e~l~~al~rL~~~l~-~~ 439 (462)
T PLN02187 363 PKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRIT--IGVEAHMLEDALERLKGFCT-RH 439 (462)
T ss_pred CCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHH-Hh
Confidence 123556788888765210 011 3445554 457889999986 36899999 45678999999999999998 76
Q ss_pred CCCCCC
Q 021893 282 PKMRKP 287 (306)
Q Consensus 282 ~~~~~~ 287 (306)
.+....
T Consensus 440 ~~~~~~ 445 (462)
T PLN02187 440 AKKTET 445 (462)
T ss_pred hhcccc
Confidence 655443
No 138
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=3.3e-21 Score=176.40 Aligned_cols=268 Identities=16% Similarity=0.165 Sum_probs=167.9
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.+|-.....++..+....-...|.|+. +..++. .|+++|+++++ ++++++
T Consensus 98 ~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~~ 174 (409)
T PLN00143 98 DDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD---ENTIAM 174 (409)
T ss_pred hhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc---cCCEEE
Confidence 357888888888777766665544333333455443 122221 27899998876 345666
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccCC---CCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEE---VRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~~---~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++.++|++|.+ .+.+.+++|.++|++|++++|+||+|.++.+.+..+ +..... ....+.||||.++ +|+ |+|
T Consensus 175 ~~~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl-RvG 252 (409)
T PLN00143 175 VIINPGNPCGSV-YSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW-GLG 252 (409)
T ss_pred EEECCCCCCCCc-cCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCcc-ceE
Confidence 666668899855 589999999999999999999999999875544321 111111 1223449999977 899 999
Q ss_pred eeEeC-H-HH------HhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893 140 AVLAD-K-EV------MLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV 208 (306)
Q Consensus 140 ~~~~~-~-~~------~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 208 (306)
|++++ + .+ ++.+........+ .+.+.+.++.++++.... ++..+++++..+.+.+.|+++ +...
T Consensus 253 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~ 327 (409)
T PLN00143 253 WLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEI----PCIM 327 (409)
T ss_pred EEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcC----CCCC
Confidence 99983 3 33 2222221122222 356777777766642111 223344444444444444432 1111
Q ss_pred -eeEEEeeeEEEEEEecCC--ChhhHHHHHH-HHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893 209 -KEVRGRGLFNAVEFDKTA--LPVSAYDICL-KMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 209 -~~~~~~g~~~~i~~~~~~--~~~~~~~~~~-~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~ 280 (306)
...+..|+++|+.++... ...+..+++. .+.++||.+.|+ .++++|++. ..+.+++++++++|+++++ +
T Consensus 328 ~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~--~~~~~~l~~al~rl~~~l~-~ 404 (409)
T PLN00143 328 CPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF--AVEQSSLEDGLGRLKSFCG-R 404 (409)
T ss_pred CCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEE--cCCHHHHHHHHHHHHHHHH-H
Confidence 234557889999886310 0113556665 446889999986 368999994 4678999999999999998 6
Q ss_pred cCC
Q 021893 281 LPK 283 (306)
Q Consensus 281 ~~~ 283 (306)
..+
T Consensus 405 ~~~ 407 (409)
T PLN00143 405 HAK 407 (409)
T ss_pred hcc
Confidence 543
No 139
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2.7e-21 Score=176.30 Aligned_cols=224 Identities=19% Similarity=0.241 Sum_probs=154.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc-----ccCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-----DWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~-----~~~~ 119 (306)
|++.++++++ ++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+.. .+. +..+
T Consensus 153 d~~~l~~~l~---~~~~~v~~~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 228 (393)
T PRK05764 153 TVEQLEAAIT---PKTKALILNSPSNPTGAV-YSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRD 228 (393)
T ss_pred CHHHHHHhhC---ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcC
Confidence 5789998886 467788888888889865 57889999999999999999999999876443321 111 1112
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
....+.|+||.++ +|+ |+||+++++++++.+...........+.+.+.++...++.... ++..++++++.+.+++.
T Consensus 229 ~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 307 (393)
T PRK05764 229 RTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDG 307 (393)
T ss_pred CEEEEecCcccccCccc-eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 2233458999999 899 9999999999998876543334445677777777776652111 22344455555555555
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEG 269 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~ 269 (306)
|++. ++.....+..|.++|+.++... ......++.+.|+ ++||.+.++. .+++|++ +..++++++++
T Consensus 308 L~~~----~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~ 381 (393)
T PRK05764 308 LNEI----PGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEG 381 (393)
T ss_pred HhhC----CCCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHH
Confidence 5553 1222233445667787776421 0113478888876 4699998752 4899999 45689999999
Q ss_pred HHHHHHHHhhhc
Q 021893 270 SKALHDVLELDL 281 (306)
Q Consensus 270 ~~~l~~~l~~~~ 281 (306)
+++|.++++ +.
T Consensus 382 i~~l~~~~~-~~ 392 (393)
T PRK05764 382 LERIERFLE-SL 392 (393)
T ss_pred HHHHHHHHH-hh
Confidence 999999887 53
No 140
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=2.7e-21 Score=178.10 Aligned_cols=265 Identities=19% Similarity=0.211 Sum_probs=170.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc------------ccccC-------CCHHHHHHHHHhc---CCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH------------LKVDF-------GDITALEKIFKES---GDQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-------~d~~~le~~i~~~---~~~ 60 (306)
..|++..|+.++....+..+..+.+..-...|+|++. +.++. .|++.+|+++++. +.+
T Consensus 121 ~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~ 200 (447)
T PLN02607 121 DRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIR 200 (447)
T ss_pred HHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 3578888888886666655555444333334555431 12221 3689999988752 347
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cC---C---CCCcEEEecc
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WE---E---VRPDMVILGK 129 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~---~---~~~d~~s~sK 129 (306)
++++++++++|++|. +.+++.+++|.++|++|++.+|+||+|.++.+.+..+ +. + .. + ....+.++||
T Consensus 201 vk~lll~nP~NPtG~-~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK 279 (447)
T PLN02607 201 VRGVLITNPSNPLGA-TVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK 279 (447)
T ss_pred eeEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence 888888888999995 5689999999999999999999999998743332222 11 0 01 1 1112349999
Q ss_pred ccc-CCcccceeeEe-CHHHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhhccH--------HHHHHHHHHHHHHHHH
Q 021893 130 ALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRDEKL--------AERSAHLGEELRQHLF 198 (306)
Q Consensus 130 ~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~~~~--------~~~~~~~~~~l~~~L~ 198 (306)
.|| +|+ |+||+++ +++++..++.. ..+ ..+.+.+.++...++ +.++ .+++++..+.+.+.|+
T Consensus 280 ~fg~~Gl-RvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~ 352 (447)
T PLN02607 280 DLGLPGF-RVGTIYSYNDKVVTTARRM---SSFTLVSSQTQHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLR 352 (447)
T ss_pred cCCCCcc-eEEEEEEcCHHHHHHHHHH---hhcCCCCHHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 999 9999998 67776665532 222 235555555554443 3222 2333333444444444
Q ss_pred HHHhhCCCceeeEEEeeeEEEEEEecCC---ChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHH
Q 021893 199 KIQQQFPNYVKEVRGRGLFNAVEFDKTA---LPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~---~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~ 268 (306)
+. +........|+++|+.++..- ......++++.+++ +||.+.|+ .++|+|++... .+++++++
T Consensus 353 ~~-----gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~ 426 (447)
T PLN02607 353 RA-----GIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEV 426 (447)
T ss_pred hC-----CCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHH
Confidence 42 232344567999999986411 01223467777775 69999986 26899999432 47899999
Q ss_pred HHHHHHHHHhhhcC
Q 021893 269 GSKALHDVLELDLP 282 (306)
Q Consensus 269 ~~~~l~~~l~~~~~ 282 (306)
+++||.++++ ..+
T Consensus 427 gl~Ri~~~l~-~~~ 439 (447)
T PLN02607 427 ALKRIHRFMD-RRK 439 (447)
T ss_pred HHHHHHHHHH-HHH
Confidence 9999999998 544
No 141
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.88 E-value=3.2e-21 Score=176.27 Aligned_cols=263 Identities=13% Similarity=0.156 Sum_probs=169.3
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+.+|...++..+..+....-...|.++. +..++. .|++.+++.++ +++++++
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~ 173 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID---EKTAALI 173 (401)
T ss_pred HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc---cCceEEE
Confidence 47777777777666655554432222222233322 122221 36888988886 3578888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCC--CCcEEEeccccc-CCccccee
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEV--RPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~--~~d~~s~sK~~~-~G~~~~g~ 140 (306)
++.++|++|.. .+.+.+++|.++|+++|+++|+||+|.+|.+.+..+ ++ ....- ...+.||||.++ +|+ |+||
T Consensus 174 ~~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~ 251 (401)
T TIGR01264 174 VNNPSNPCGSV-FSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW-RLGW 251 (401)
T ss_pred EcCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccc-eEEE
Confidence 88889999965 579999999999999999999999999875554321 11 11111 122349999977 899 9999
Q ss_pred eEeCH------HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Q 021893 141 VLADK------EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV 211 (306)
Q Consensus 141 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 211 (306)
+++++ ++++.+..... ..+..+.+.+.++...++...+ ++..+.++++++.+.+.|+.+ +++....
T Consensus 252 iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~----~~~~~~~ 326 (401)
T TIGR01264 252 IIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV----PGLRPVM 326 (401)
T ss_pred EEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccC
Confidence 99863 34444432211 2344567777777777753111 223444555555555555543 2222244
Q ss_pred EEeeeEEEEEEecC--CChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 212 RGRGLFNAVEFDKT--ALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 212 ~~~g~~~~i~~~~~--~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+..|+++|+.++.. +......++++.|+ ++||.+.|+ .++++|++. ..+++++++++++|.++++
T Consensus 327 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 327 PSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVL--TVPVVMMEEACSRIQEFCE 398 (401)
T ss_pred CCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEE--cCCHHHHHHHHHHHHHHHh
Confidence 67899999987531 11124677888886 689999985 368999994 4578999999999999887
No 142
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.1e-21 Score=175.74 Aligned_cols=260 Identities=16% Similarity=0.142 Sum_probs=167.9
Q ss_pred eEEEEecCCCCcccchhcccCCcc-ccccCCCCCCC-----------cccccC------CCHHHHHHHHHhc-CCcEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPG-----------HLKVDF------GDITALEKIFKES-GDQIAGF 64 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~-~~~~~~v 64 (306)
.|++..|+.++-...+.+...+.. ..-...|.|+. ++.++. .|+++|++++++. .++++++
T Consensus 93 ~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i 172 (374)
T PRK02610 93 NISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVV 172 (374)
T ss_pred HEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEE
Confidence 478888888876544443332221 22333344433 122221 2689999988742 1368888
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA 143 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~ 143 (306)
++++++|+||.. .+++.+++|.++| +++++|+||+|.+|.............-...+.||||.++ +|+ |+||+++
T Consensus 173 ~l~~P~NPTG~~-~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~Gl-RiG~~v~ 248 (374)
T PRK02610 173 FVVHPNSPTGNP-LTAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAH-RVGYAIG 248 (374)
T ss_pred EEeCCCCCCCCC-CCHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCccc-ceeeeec
Confidence 888889999965 5788899999887 4999999999997732211111111111123459999997 999 9999999
Q ss_pred CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
++++++.+.... ..+..+.+.+.++..+++.. +.+.+.+++..+. ++.+.+.....+++. ..+..|.++|+.++
T Consensus 249 ~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~-~~p~~g~f~~~~l~ 322 (374)
T PRK02610 249 HPELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLR-VWPSAANFLYLRLS 322 (374)
T ss_pred CHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcE-eCCCcceEEEEeCC
Confidence 999988876543 23556777777777666532 2233333333332 222322222232222 34567888898886
Q ss_pred cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
. ..+..++++.|.++||.+.+. .+++|++. . +.+++++++++|+++++ .+
T Consensus 323 ~---~~~~~~~~~~l~~~gi~v~~~-~~~lRls~--~-~~~~~~~~l~~l~~~l~-~~ 372 (374)
T PRK02610 323 Q---DAALAALHQALKAQGTLVRHT-GGGLRITI--G-TPEENQRTLERLQAALT-QL 372 (374)
T ss_pred C---CCCHHHHHHHHHHCCEEEEeC-CCeEEEeC--C-CHHHHHHHHHHHHHHHh-hc
Confidence 4 346778999999999999875 67999994 3 45778999999999887 54
No 143
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.88 E-value=7.8e-21 Score=172.82 Aligned_cols=222 Identities=18% Similarity=0.234 Sum_probs=159.3
Q ss_pred ccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccC
Q 021893 42 VDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWE 118 (306)
Q Consensus 42 ~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~ 118 (306)
+++.|++++++.++++. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. +++.|... ...+
T Consensus 144 ~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~ 218 (385)
T TIGR01825 144 YKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGT-VHHF 218 (385)
T ss_pred eCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCcc-Hhhc
Confidence 45678999999888643 36899999999999998888 99999999999999999999973 33333211 1222
Q ss_pred ----CCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Q 021893 119 ----EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGE 191 (306)
Q Consensus 119 ----~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~ 191 (306)
+....+.|+||+++ . +.||+++++++++.+..... ..+...++..+.++.++++.+.+ .+..+++.++++
T Consensus 219 ~~~~~~~i~~~s~sK~~~--~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 295 (385)
T TIGR01825 219 GLEDKVDIQVGTLSKAIG--V-VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTR 295 (385)
T ss_pred CCCcCCcEEEEeccHHhh--c-CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 23333569999996 2 33668889998887754322 11223466777788888887644 346778888889
Q ss_pred HHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHH
Q 021893 192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSN 264 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~ 264 (306)
++++.|++++... ....+.++++.++. ..+..++++.|+++||.+.+ .+..++|++|++.++++
T Consensus 296 ~l~~~L~~~g~~~------~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e 366 (385)
T TIGR01825 296 FFKAGLGKLGYDT------GGSETPITPVVIGD---EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKD 366 (385)
T ss_pred HHHHHHHHcCCCC------CCCCCCEEEEEECC---HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHH
Confidence 9999888763221 11223345554432 23567899999999998853 23478999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 021893 265 ELQEGSKALHDVLELDL 281 (306)
Q Consensus 265 ~i~~~~~~l~~~l~~~~ 281 (306)
++++++++|+++++ ++
T Consensus 367 ~i~~~~~~l~~~~~-~~ 382 (385)
T TIGR01825 367 DLDQALDAYEKVGK-EL 382 (385)
T ss_pred HHHHHHHHHHHHHH-Hh
Confidence 99999999999987 53
No 144
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.88 E-value=4e-21 Score=165.19 Aligned_cols=224 Identities=20% Similarity=0.323 Sum_probs=181.0
Q ss_pred cccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS 115 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~ 115 (306)
-.+|+|||++.||++|+..+ ..++.|-.|.++++.|.++| |++|++++++||.+-++||+|. | +|..|.+. -
T Consensus 281 K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaGv-g 355 (570)
T KOG1360|consen 281 KHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGV-G 355 (570)
T ss_pred ceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCCc-c
Confidence 37889999999999999864 34799999999999999999 9999999999999999999998 6 45566665 3
Q ss_pred ccCCC--CCcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893 116 DWEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRDE---KLAE 184 (306)
Q Consensus 116 ~~~~~--~~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~~---~~~~ 184 (306)
+..|+ +.|++ +++|+|| ||| +..+..+++-++....+..| +.++..++.|+++.+.+..+ .++.
T Consensus 356 erdGvm~kvDiIsGTLgKafGcVGGY-----IAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~ 430 (570)
T KOG1360|consen 356 ERDGVMHKVDIISGTLGKAFGCVGGY-----IAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRR 430 (570)
T ss_pred ccCCcchhhhhcccchhhhcccccce-----ehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHH
Confidence 55554 45666 7899999 777 99999999888876544434 45778888899999999864 2567
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cceecc-------CCCCEEEEe
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP-------THDTIVRLT 256 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~-------~~~~~lRi~ 256 (306)
..+++.+++++.|.+++.. ..+....++++.+.+ ...+.+.++.|+++ ||++.. .++..+|+.
T Consensus 431 ~hqrnv~~~kq~l~~~GiP------Vi~~pSHIiPv~vgd---a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRia 501 (570)
T KOG1360|consen 431 QHQRNVKYVKQLLMELGIP------VIPNPSHIIPVRVGD---AALAKQASDILISKHNIYVQAINYPTVARGTERLRIA 501 (570)
T ss_pred HHHHHHHHHHHHHHHcCCc------ccCCCcceeeeeccC---HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecC
Confidence 7788899999999887522 445666777777664 45567788888755 999873 478899999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 257 PPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 257 ~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
|.-.+|.+.++.+++.+...++ ++.
T Consensus 502 PTP~HT~~mm~~lv~~l~~vw~-~v~ 526 (570)
T KOG1360|consen 502 PTPHHTPQMMNILVNALLDVWN-EVG 526 (570)
T ss_pred CCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 9999999999999999999998 653
No 145
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.7e-21 Score=174.78 Aligned_cols=218 Identities=21% Similarity=0.242 Sum_probs=149.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc--
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD-- 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d-- 123 (306)
|++.+++.+.. +++++++++.++|++|.+ .+.+.++++.+.|+ ++++||+||+|..+.+.+....... ..++
T Consensus 143 ~~~~l~~~~~~--~~~~~i~l~~P~NPtG~~-~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~--~~~~~i 216 (369)
T PRK08153 143 DLDALLDAARR--ENAPLVYLANPDNPMGSW-HPAADIVAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDT--DDPNVI 216 (369)
T ss_pred CHHHHHHHhcc--cCCcEEEEeCCCCCCCCC-CCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcccchhhhh--cCCCEE
Confidence 46666555543 467788887788889865 47888888888876 4999999999998765553222221 1223
Q ss_pred -EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Q 021893 124 -MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 124 -~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+.||||.++ +|+ |+||+++++++++.+.... ..++.+++++.++.++++ ++++.++.++..+..++.+.+..
T Consensus 217 ~~~SfSK~~g~~Gl-RiG~~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L 290 (369)
T PRK08153 217 RMRTFSKAYGLAGA-RVGYAIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIA 290 (369)
T ss_pred EEecchHhccCcch-heeeeecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHH
Confidence 449999998 999 9999999999988776533 246678888888888875 22333444443444444443333
Q ss_pred hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec-cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-PT---HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
... +.. ..+..+.++++.++.. ...+.++.+.|+++||.++ |+ ..+++|++.. ++++++.+++.|++++
T Consensus 291 ~~~-g~~-~~p~~~~f~~~~~~~~--~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~ 363 (369)
T PRK08153 291 RAN-GLT-PLPSATNFVAIDCGRD--GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEAL 363 (369)
T ss_pred HHC-CCc-cCCCcCcEEEEECCCC--cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHH
Confidence 332 121 2356677777766421 2457789999999999996 43 3479999943 7899999999999998
Q ss_pred hhhcCC
Q 021893 278 ELDLPK 283 (306)
Q Consensus 278 ~~~~~~ 283 (306)
. ..++
T Consensus 364 ~-~~~~ 368 (369)
T PRK08153 364 E-AARK 368 (369)
T ss_pred H-Hhhc
Confidence 7 6543
No 146
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=6.5e-21 Score=177.51 Aligned_cols=266 Identities=15% Similarity=0.182 Sum_probs=174.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC------------cccccC-------CCHHHHHHHHHh---cCCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------------HLKVDF-------GDITALEKIFKE---SGDQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-------~d~~~le~~i~~---~~~~ 60 (306)
..|++..|+.++....+..+..+.+..-...|.|++ ++.++. .|++.+++.+++ .+.+
T Consensus 120 e~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~ 199 (496)
T PLN02376 120 ERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKK 199 (496)
T ss_pred hhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCC
Confidence 468888888888887777777765544444466655 123333 157888776542 2246
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccc-c------CCCCCc----EEEec
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD-W------EEVRPD----MVILG 128 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~-~------~~~~~d----~~s~s 128 (306)
+++++++.++|++|.+ .+++.+++|.++|++|+++||+||+|.++.+.+..+ +.. . .+..++ +.|||
T Consensus 200 ~k~l~l~nP~NPTG~~-~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~S 278 (496)
T PLN02376 200 VKGLILTNPSNPLGTM-LDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLS 278 (496)
T ss_pred eeEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEecc
Confidence 8888888889999964 689999999999999999999999999764444322 110 1 011222 34999
Q ss_pred cccc-CCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccH--------HHHHHHHHHHHHHHHH
Q 021893 129 KALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL--------AERSAHLGEELRQHLF 198 (306)
Q Consensus 129 K~~~-~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~--------~~~~~~~~~~l~~~L~ 198 (306)
|.++ +|+ |+||++++ +.+.+.++.... ....+.+.+.++...++ +.++ .++++++.+.+.+.|+
T Consensus 279 K~~glpGl-RvG~li~~~~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~ 352 (496)
T PLN02376 279 KDMGLPGF-RVGIVYSFNDSVVSCARKMSS--FGLVSSQTQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIK 352 (496)
T ss_pred ccCCCCcc-eEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 999 99999984 556554433221 12245666666555553 2222 2333344444444444
Q ss_pred HHHhhCCCceeeEEEeeeEEEEEEecCCC---h-hhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893 199 KIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-VSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~-~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~ 267 (306)
+. +.....+..|+++|++++..-. . ....++++.++++ ||.+.|+ .++++|++... .++++++
T Consensus 353 ~~-----gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~ 426 (496)
T PLN02376 353 KA-----DIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLH 426 (496)
T ss_pred HC-----CCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHH
Confidence 32 2333345788999999864210 1 1235788888875 9999985 35899999532 4789999
Q ss_pred HHHHHHHHHHhhhcC
Q 021893 268 EGSKALHDVLELDLP 282 (306)
Q Consensus 268 ~~~~~l~~~l~~~~~ 282 (306)
.++++|++++. ...
T Consensus 427 ~al~rl~~~l~-~~~ 440 (496)
T PLN02376 427 VALGRIQDFVS-KNK 440 (496)
T ss_pred HHHHHHHHHHH-Hhh
Confidence 99999999997 543
No 147
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=4.7e-21 Score=172.51 Aligned_cols=218 Identities=19% Similarity=0.270 Sum_probs=157.4
Q ss_pred ccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccc
Q 021893 40 LKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASD 116 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~ 116 (306)
..++..|++.+++.++++. .++++++++++++++|.+.+ +++|.++|+++|+++|+||+|+. ++..+... ..
T Consensus 125 ~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~ 199 (360)
T TIGR00858 125 RRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGT-LE 199 (360)
T ss_pred EEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCch-HH
Confidence 4456679999999998653 35789999999999998877 99999999999999999999973 22222211 22
Q ss_pred cCCCCC-----cEEEecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHH
Q 021893 117 WEEVRP-----DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAH 188 (306)
Q Consensus 117 ~~~~~~-----d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~ 188 (306)
.+++.+ .+.|+||++++ +.||+++++++++.+...... .+...++..++++.++++.... ++..+++++
T Consensus 200 ~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 276 (360)
T TIGR00858 200 HFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLA 276 (360)
T ss_pred hcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 223322 25699999973 226788999888876533222 1223456666677788876654 346788889
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCC
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSI 261 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~ 261 (306)
+.+++.+.|+++. + . ..+..+.++|+.++. ..+..++.+.|.++||.+.+. +.+++|++++..+
T Consensus 277 ~~~~l~~~L~~~~--~---~-~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~ 347 (360)
T TIGR00858 277 LIARLRAGLEALG--F---T-LMPSCTPIVPVIIGD---NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAH 347 (360)
T ss_pred HHHHHHHHHHHcC--C---c-cCCCCCCEEEEEeCC---HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCC
Confidence 9999999998752 1 1 123456778887753 345778999999999999642 2468999999999
Q ss_pred CHHHHHHHHHHHH
Q 021893 262 SSNELQEGSKALH 274 (306)
Q Consensus 262 t~~~i~~~~~~l~ 274 (306)
++++++.++++|+
T Consensus 348 ~~~~i~~~l~~l~ 360 (360)
T TIGR00858 348 TPGDIDRLAEALK 360 (360)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999999873
No 148
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=2.4e-21 Score=172.65 Aligned_cols=252 Identities=14% Similarity=0.039 Sum_probs=159.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCCcEEEEEEccccC
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQG 71 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~ 71 (306)
..|++..|+.++-...+. +..+.... ...|.++. ++.+|.++.+...+.+++ .++++++++.++|
T Consensus 58 ~~I~it~Gs~~~l~~~~~-~~~~~~vv-~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~~--~~~k~v~l~nP~N 133 (332)
T PRK06425 58 IKVLIGPGLTHFIYRLLS-YINVGNII-IVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNN--YNFDLIFIVSPDN 133 (332)
T ss_pred ceEEECCCHHHHHHHHHH-HhCCCcEE-EeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHhh--cCCCEEEEeCCCC
Confidence 457888888877655543 33322211 11344433 233443221111233433 3677888878899
Q ss_pred CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc---cCCCCCcEEEeccccc-CCcccceeeEeCHHH
Q 021893 72 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD---WEEVRPDMVILGKALG-GGVIPVSAVLADKEV 147 (306)
Q Consensus 72 ~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~---~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~ 147 (306)
+||.. .+.+.+++|.++|+++|+++|+||+|.+|...+...... ..+....+.||||.++ +|+ |+||+++++++
T Consensus 134 PTG~~-~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiGy~v~~~~l 211 (332)
T PRK06425 134 PLGNL-ISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL-RIGYIATDDYN 211 (332)
T ss_pred CcCCc-cCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchh-hheeeecCHHH
Confidence 99965 589999999999999999999999999875433211111 1122233449999999 999 99999999999
Q ss_pred HhhcCCCCccCCCCCCHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC
Q 021893 148 MLCIQPGEHGSTFGGNPLASAVAIASLDVI-RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226 (306)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~ 226 (306)
++.+.... ..+..+.+++.+.. ....- ..++..+.+++.++.+.+.|++.. .....+..|.++|+.++
T Consensus 212 i~~l~~~~--~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~~~~~~~g~f~~~~~~--- 280 (332)
T PRK06425 212 MKISRKIT--EPWSVCDPAIDFIR-SIDLDYVAKHSLDIMENERSYLINNLEAMG-----FRAAGDPSANFITFMIP--- 280 (332)
T ss_pred HHHHHHcC--CCCccCHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCceEEEEEcC---
Confidence 98877532 23333444332221 11110 012345566666666666666541 22222346778888764
Q ss_pred ChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 227 LPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 227 ~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+..++++.|+++||.+.|+. ++++|++. .+.++.+.++++|++++
T Consensus 281 ---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 281 ---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAI---RRRSFNIKLVNALRNFL 331 (332)
T ss_pred ---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 35789999999999998752 46999983 36789999999998775
No 149
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=4.3e-21 Score=174.93 Aligned_cols=255 Identities=13% Similarity=0.051 Sum_probs=168.9
Q ss_pred eEEEEecCCCCcccchhcccCCccc--cccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEA--IRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAG 63 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~--~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~ 63 (306)
.|++.+|+-++-...+..+..+... .-...|.++. ++.++. .|++++++.+. +++++
T Consensus 92 ~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~ 168 (393)
T TIGR03538 92 HVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQL 168 (393)
T ss_pred eEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---hcceE
Confidence 5888899999877766665544321 2222344433 123332 26788888876 36788
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--ccc----cccCC-----CCCcEEEeccccc
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLA----SDWEE-----VRPDMVILGKALG 132 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~----~~~~~-----~~~d~~s~sK~~~ 132 (306)
++++.++|++|.. .+.+.+++|.++|++|+++||+||+|..+.+.+. ..+ ....+ ....+.||||.++
T Consensus 169 i~l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 169 LFVCSPGNPTGAV-LSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEeCCCCCcCcc-cCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 8888889999965 5899999999999999999999999997644321 111 11111 1123449999876
Q ss_pred -CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893 133 -GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE 210 (306)
Q Consensus 133 -~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 210 (306)
+|+ |+||+++++++++.+.......+++.+.+.+.++.+++..-. -.+..+.++++.+.+.+.|+.. + ...
T Consensus 248 ~~Gl-RvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~---~---~~~ 320 (393)
T TIGR03538 248 LPGL-RSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV---L---DLE 320 (393)
T ss_pred Cccc-ceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---C---ccc
Confidence 899 999999999998877654333344556677777665553110 0123344455555555555543 1 113
Q ss_pred EEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 211 VRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 211 ~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.+..|.++|+.++. +..++++.|+ ++||.+.|+. .+++|++. ..+++++++++++|++.
T Consensus 321 ~p~gg~f~~~~~~~-----~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 321 LPDAGFYLWPKVPG-----DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--VAPLEECVEAAERIRSF 392 (393)
T ss_pred CCCeeEEEEEECCC-----CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--cCCHHHHHHHHHHHHHh
Confidence 46678899998761 3467888886 5799997642 46899994 45789999999999764
No 150
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.87 E-value=7.8e-21 Score=174.21 Aligned_cols=267 Identities=16% Similarity=0.186 Sum_probs=173.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++.+|+.++-...+..+..+.+..-...|.++. +..++. .|+++|++.++ ++++++
T Consensus 105 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i 181 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKAL 181 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEE
Confidence 357888888888776666655433322222344433 122322 25788888876 467888
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCC--CCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEE--VRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~--~~~d~~s~sK~~~-~G~~~~g 139 (306)
++++++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+..+ +. .... ....+.||||.++ +|+ |+|
T Consensus 182 ~~~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RlG 259 (412)
T PTZ00433 182 IMTNPSNPCGSN-FSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGW-RLG 259 (412)
T ss_pred EEeCCCCCCCcc-cCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCe-eEE
Confidence 888889999954 579999999999999999999999999875444321 11 1111 1122349999996 999 999
Q ss_pred eeEe------CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893 140 AVLA------DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE 210 (306)
Q Consensus 140 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 210 (306)
|+++ .+++++.+..... ..+..+.+.+.++..+++... .++..++++++.+.+.+.|+.. .+....
T Consensus 260 ~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~ 334 (412)
T PTZ00433 260 WLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC----IGLSPT 334 (412)
T ss_pred EEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC----CCCccc
Confidence 9986 2456666554222 234567787777777665310 1223444555555555555432 112223
Q ss_pred EEEeeeEEEEEEecCCC--hhhHHHHHHHHHH-CCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 211 VRGRGLFNAVEFDKTAL--PVSAYDICLKMKE-RGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 211 ~~~~g~~~~i~~~~~~~--~~~~~~~~~~l~~-~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.+..|+++|+.++.... ..+..++++.|++ +||.+.|+ ..+++|++. ...++++++++++|.++++ ...
T Consensus 335 ~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~l~~al~~l~~~~~-~~~ 410 (412)
T PTZ00433 335 MPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI--SRPVEVLREAVERIKAFCE-RHK 410 (412)
T ss_pred CCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-Hhc
Confidence 45568888988763100 1146789999985 79999986 267999995 4568899999999999988 544
No 151
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=1.6e-20 Score=169.71 Aligned_cols=242 Identities=19% Similarity=0.205 Sum_probs=165.2
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCCh
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
++|+.+..+|+.....+..... ....++++|+++|+++++... +++.+|+++++++++|.+.|
T Consensus 96 d~ii~d~~~H~sv~~~~~~~~~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p-- 161 (370)
T PRK05937 96 DYVLWDEQVHISVVYSLSVISG------------WHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP-- 161 (370)
T ss_pred CEEEEEhhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC--
Confidence 5677777777766555443210 013457899999999998532 34678889999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCC---CCCcEEEecccccC-CcccceeeEeCHHHHhhcC--
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEE---VRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQ-- 152 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~---~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~~~~-- 152 (306)
+++|.++|+++|+++++||+|+ | ++..|..+ ...++ ..+++.|+||.+|+ |. + ++..+++.+.+.
T Consensus 162 --l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~~~~~tlsK~~g~~G~---~-vl~~~~~~~~~~~~ 234 (370)
T PRK05937 162 --LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF-CHSLGYENFYAVLVTYSKALGSMGA---A-LLSSSEVKQDLMLN 234 (370)
T ss_pred --HHHHHHHHHHcCCEEEEECCccccccCCCCCch-HHhhCCCCCcEEEEechhhhhcCce---E-EEcCHHHHHHHHHh
Confidence 9999999999999999999998 5 55555443 22222 23577899999983 32 2 445555544432
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhh
Q 021893 153 PGEHGSTFGGNPLASAVAIASLDVIRDEK--LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230 (306)
Q Consensus 153 ~~~~~~~~~~~~~~~~aa~~al~~~~~~~--~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~ 230 (306)
..........++.+++++.++++.+.+.. ..++++++.+++++.|.... .+...++.++. ..
T Consensus 235 ~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~------------~~~~~~i~~~~----~~ 298 (370)
T PRK05937 235 SPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAA------------PGCVQPIFLPG----IS 298 (370)
T ss_pred CCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCC------------CCCEEEEEeCC----hh
Confidence 11222233457777777778888886532 34556666666655543210 11122344442 34
Q ss_pred HHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 231 AYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 231 ~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
..++.+.|.++||.+... ..+++|++++..+|++|++.+++.|+++++ ++.+
T Consensus 299 ~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~-~~~~ 353 (370)
T PRK05937 299 EQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLE-KYQK 353 (370)
T ss_pred HHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH-HhCC
Confidence 568899999999988732 256899999999999999999999999998 7755
No 152
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=1.7e-21 Score=175.71 Aligned_cols=257 Identities=13% Similarity=0.116 Sum_probs=172.3
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
..|++..|+.++-...+..+..+....-...|.++. +..+|. .|++.+++.++ +++++++++
T Consensus 82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~---~~~~~v~i~ 158 (366)
T PRK01533 82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVD---NDTKIVWIC 158 (366)
T ss_pred ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhC---cCCcEEEEe
Confidence 467788888877666655554433322222333322 223333 37899998886 467788888
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccc---cCCCCCcEEEeccccc-CCcccceeeE
Q 021893 68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD---WEEVRPDMVILGKALG-GGVIPVSAVL 142 (306)
Q Consensus 68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~---~~~~~~d~~s~sK~~~-~G~~~~g~~~ 142 (306)
.++|++|.+. +.+.+++|.++|++++ ++|+||+|.+|...+... ... ..+....+-||||.++ +|+ |+||++
T Consensus 159 ~P~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~i 235 (366)
T PRK01533 159 NPNNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF-RVGYAV 235 (366)
T ss_pred CCCCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHH-HHhHHh
Confidence 8899999665 7888999999998877 567799998764332111 111 1112223449999999 999 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
+++++++.+.... ..++.+.+++.++.++++. .++.+++++..+..++.+....... +.. ..+..|+++|+.+
T Consensus 236 ~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~~---~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~~~~~~nf~~~~~ 308 (366)
T PRK01533 236 GHEELIEKLNVVR--LPFNVSSLAQKAATIAFGD---DEFIEEIVRVNTEGLRQYESFCKEN-EIP-FYQSQTNFIFLPV 308 (366)
T ss_pred CCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-cCCCcCcEEEEeC
Confidence 9999998886533 3577888898888888852 2333333333333333444333322 121 2345678888876
Q ss_pred ecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 223 DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+ +..++.+.|+++||.+++. ++++|++ .-+.++.+.++++|+++++ ..++
T Consensus 309 ~------~~~~~~~~l~~~GI~Vr~~-~~~iRis---~~~~~~~~~l~~al~~~~~-~~~~ 358 (366)
T PRK01533 309 E------NGGEIYEACAHAGFIIRPF-PNGVRIT---VGTREQNEGVISVLQQHFE-NKKR 358 (366)
T ss_pred C------CHHHHHHHHHHCCcEEccC-CCceEEe---CCCHHHHHHHHHHHHHHHH-hccc
Confidence 4 2457899999999999986 6889998 4478999999999999988 6554
No 153
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.87 E-value=9.7e-21 Score=174.11 Aligned_cols=268 Identities=15% Similarity=0.146 Sum_probs=169.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.+|-..+...+..+.+..-...|.|+. +..++. .|++.++++++ ++++++
T Consensus 118 ~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i 194 (430)
T PLN00145 118 DDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD---ENTVAM 194 (430)
T ss_pred hhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC---cCceEE
Confidence 458888888888777666665543333223344442 122221 27899998887 467777
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC---CCCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE---EVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~---~~~~d~~s~sK~~~-~G~~~~g 139 (306)
++++++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++.+.+..+ +.... .....+.||||.++ +|+ |+|
T Consensus 195 ~i~~P~NPtG~v-~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~-RlG 272 (430)
T PLN00145 195 VIINPNNPCGSV-YSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGW-RLG 272 (430)
T ss_pred EEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCe-eEE
Confidence 777778999964 579999999999999999999999999875444321 11111 11223449999977 999 999
Q ss_pred eeEe--CHHHHh------hcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893 140 AVLA--DKEVML------CIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV 208 (306)
Q Consensus 140 ~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 208 (306)
|+++ ++.+++ .+.... ......+.+.+.++...++.-.+ ++..+.++++++.+.+.|+.. ++..
T Consensus 273 ~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~g~~ 347 (430)
T PLN00145 273 WIATCDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI----KCIT 347 (430)
T ss_pred EEEEecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCC
Confidence 9987 333332 222211 12223466777777776653111 123334444444444444432 2222
Q ss_pred e-eEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893 209 K-EVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 209 ~-~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~ 280 (306)
. ..+..|+++|+.++... ...+..+++..|+ ++||.+.|+ .++++|++. ..+.+++++++++|.+++. +
T Consensus 348 ~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~--~~~~~~l~~al~rl~~~~~-~ 424 (430)
T PLN00145 348 CPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITF--AIDPPSLEDGLERLKSFCL-R 424 (430)
T ss_pred CCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-H
Confidence 1 24667888888776310 0124567776665 669999985 368999995 4688999999999999998 6
Q ss_pred cCC
Q 021893 281 LPK 283 (306)
Q Consensus 281 ~~~ 283 (306)
..+
T Consensus 425 ~~~ 427 (430)
T PLN00145 425 HAK 427 (430)
T ss_pred hcc
Confidence 654
No 154
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.87 E-value=6.3e-21 Score=174.29 Aligned_cols=266 Identities=15% Similarity=0.104 Sum_probs=173.7
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
+|++.+|+.+|......+...+....-...|.++. ...++. .|++.+++.++ +++++++
T Consensus 95 ~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~ 171 (402)
T PRK06107 95 EITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT---PRTRWLI 171 (402)
T ss_pred hEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC---cCceEEE
Confidence 47777777777666655444433222222232221 112221 25788888876 4677777
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHc-CCEEEEehhhhcccccccccc-cc-c-CCC---CCcEEEeccccc-CCccc
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLA-SD-W-EEV---RPDMVILGKALG-GGVIP 137 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li~De~~~g~~~~g~~~~-~~-~-~~~---~~d~~s~sK~~~-~G~~~ 137 (306)
++.++|++|.. .+.+.+++|+++|++| ++++|+||+|..+.+.+..+. +. . .+. ...+.|+||.++ +|+ |
T Consensus 172 l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-R 249 (402)
T PRK06107 172 LNAPSNPTGAV-YSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW-R 249 (402)
T ss_pred EECCCCCCCcC-cCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc-c
Confidence 77778899954 5899999999999998 999999999987644443221 11 1 111 222448899998 999 9
Q ss_pred ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+||+++++++++.+........++.+.+.+.++..+++.-. .++..+.++++.+.+.+.|+.. ++.....+..|
T Consensus 250 iG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~g~~~~~p~gg 325 (402)
T PRK06107 250 IGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI----PGLSCLVPDGA 325 (402)
T ss_pred eeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC----CCCcccCCCcc
Confidence 99999999999888775555566778888888877774211 0223444555555555555542 22333345678
Q ss_pred eEEEEEEecC-----CCh---hhHHHHHHHH-HHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKT-----ALP---VSAYDICLKM-KERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~-----~~~---~~~~~~~~~l-~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.++|+.++.. +.. .+..+++..+ .++||.+.|+ ..+++|++. ..+.+++++++++|.+.++ ++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~--~~~~e~l~~~l~~l~~~l~-~~ 401 (402)
T PRK06107 326 FYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI--ATSLETLEEACARIERAVA-AL 401 (402)
T ss_pred eEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-hc
Confidence 8888876421 001 1456777666 4679999986 257999994 4689999999999999987 54
No 155
>PLN02656 tyrosine transaminase
Probab=99.87 E-value=1.1e-20 Score=173.08 Aligned_cols=267 Identities=15% Similarity=0.112 Sum_probs=170.9
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.+|....+..+..+.+..-...|.++. +..++. .|++.+++.++ ++++++
T Consensus 97 ~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v 173 (409)
T PLN02656 97 DDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD---QNTVAL 173 (409)
T ss_pred ccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc---cCceEE
Confidence 468888888888766655554433222222233322 122221 27889988886 356677
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc---ccCCCCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS---DWEEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~---~~~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+..+ +. +.......+.||||.++ +|+ |+|
T Consensus 174 ~l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl-RiG 251 (409)
T PLN02656 174 VIINPGNPCGNV-YSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW-RLG 251 (409)
T ss_pred EEECCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcce-eEE
Confidence 777778899865 578999999999999999999999999875554321 11 11111223448999976 899 999
Q ss_pred eeEeC--------HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893 140 AVLAD--------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV 208 (306)
Q Consensus 140 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 208 (306)
|++++ +++++.+...... ..+.+.+.+.++..+++...+ ++..++++++++.+.+.|+.+ +...
T Consensus 252 ~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~~~~ 326 (409)
T PLN02656 252 WFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI----PCIT 326 (409)
T ss_pred EEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC----CCCc
Confidence 99983 5677766543221 224567788888777753111 223444555555555555543 1111
Q ss_pred -eeEEEeeeEEEEEEecCC-Ch-hhHHHH-HHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893 209 -KEVRGRGLFNAVEFDKTA-LP-VSAYDI-CLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 209 -~~~~~~g~~~~i~~~~~~-~~-~~~~~~-~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~ 280 (306)
...+..|+++|+.++... .. .+..++ .+.|.++||.+.|+ .++++|++.. .+++++++++++|++++. .
T Consensus 327 ~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~-~ 403 (409)
T PLN02656 327 CPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYL-R 403 (409)
T ss_pred CCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH-H
Confidence 123566788898876310 01 124344 56777889999986 3579999954 588999999999999988 5
Q ss_pred cC
Q 021893 281 LP 282 (306)
Q Consensus 281 ~~ 282 (306)
..
T Consensus 404 ~~ 405 (409)
T PLN02656 404 HS 405 (409)
T ss_pred hc
Confidence 44
No 156
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.87 E-value=3e-21 Score=174.27 Aligned_cols=252 Identities=16% Similarity=0.100 Sum_probs=164.5
Q ss_pred ceEEEEecCCCCcccchhcc-cCCccccccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893 3 AIIVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE 72 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~ 72 (306)
..|++.+|+.++-...+..+ ..+.+..-...|.++. ...+.+++++++++ ++++++++++++|+
T Consensus 87 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~l~~------~~~~~v~~~~p~NP 160 (364)
T PRK07865 87 AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTELGP------QRPALIWLNSPSNP 160 (364)
T ss_pred ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhhCCc------ccceEEEEcCCCCC
Confidence 46888888887765544443 2332222222344433 23334445444432 46788888888999
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-cc------CCCCCcEEEeccccc-CCcccceeeEeC
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DW------EEVRPDMVILGKALG-GGVIPVSAVLAD 144 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~------~~~~~d~~s~sK~~~-~G~~~~g~~~~~ 144 (306)
+|.+ .+.+.+++|.++|++||+++|+||+|.++...+...+. .. ......+.||||.++ +|+ |+||++++
T Consensus 161 tG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~i~~~ 238 (364)
T PRK07865 161 TGRV-LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY-RAGFVAGD 238 (364)
T ss_pred CCcc-CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCce-eeEEEecC
Confidence 9965 47899999999999999999999999977554432211 11 011223449999996 899 99999999
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+++++.+........++.+.+.+.++..+++... .++..+.++++.+.+.+.|++.+ .....+..|.++|+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~ 313 (364)
T PRK07865 239 PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAG-----FRVDHSEAGLYLWATRG 313 (364)
T ss_pred HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC-----CcccCCCccEEEEEeCC
Confidence 9998887654334445567777777766664311 12234455556666666665531 22223445667777653
Q ss_pred cCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 224 KTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
.+..++++.|.++||.+.|+ .++++|++.. .+++++++++++|+
T Consensus 314 -----~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 314 -----EDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred -----CCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 23567888999999999874 3579999954 47899999999885
No 157
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.87 E-value=4.4e-21 Score=180.44 Aligned_cols=265 Identities=13% Similarity=0.122 Sum_probs=164.3
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++.+|+-++-..++.++..+.+..-...|.|+. ++.++. .|++++++.++ +++++++
T Consensus 210 ~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~ 286 (517)
T PRK13355 210 DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKIT---SRTKAIV 286 (517)
T ss_pred HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcC---cCceEEE
Confidence 57777777777665555555443332222344433 122211 37899998886 4688888
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccC-CC-CCcEEEeccccc-CCccccee
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE-EV-RPDMVILGKALG-GGVIPVSA 140 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~-~~-~~d~~s~sK~~~-~G~~~~g~ 140 (306)
++.++|+||.+ .+++.+++|.++|++||++||+||+|..+.+.+..+ +. ... .. ...+.||||.++ +|+ |+||
T Consensus 287 i~nP~NPTG~v-~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~-RiG~ 364 (517)
T PRK13355 287 IINPNNPTGAL-YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGY-RIGW 364 (517)
T ss_pred EECCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCccc-ceEE
Confidence 88889999966 579999999999999999999999999875554321 11 111 11 111247899997 899 9999
Q ss_pred eEeC--HH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHH---HHHHHHHHHHHHHHHHHhhCCCceee
Q 021893 141 VLAD--KE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAE---RSAHLGEELRQHLFKIQQQFPNYVKE 210 (306)
Q Consensus 141 ~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~~~ 210 (306)
++++ ++ +++.+... ....++.+.+++.++.++++.... ++... ++.+.++.+.+.|++ .++....
T Consensus 365 ~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g~~~~ 439 (517)
T PRK13355 365 MILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNA----IPGISAV 439 (517)
T ss_pred EEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhc----CCCcccC
Confidence 9853 43 33333211 123345677888888777742110 11111 222333444444443 2223334
Q ss_pred EEEeeeEEEEEEecCCC-hhhHHHHH-HHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 211 VRGRGLFNAVEFDKTAL-PVSAYDIC-LKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 211 ~~~~g~~~~i~~~~~~~-~~~~~~~~-~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+..++++|+.++.... ..+..+++ +.|.++||.+.|+ .+++||++ +..+.+++++++++|.++++ ..
T Consensus 440 ~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris--~~~~~~~l~~a~~rl~~~~~-~~ 515 (517)
T PRK13355 440 KPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVV--YLPRLEDLEDAMDRLADFFS-YY 515 (517)
T ss_pred CCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEE--eCCCHHHHHHHHHHHHHHHH-Hh
Confidence 45566667767653110 11234555 5566889999875 36899999 56789999999999999988 54
No 158
>PRK07550 hypothetical protein; Provisional
Probab=99.87 E-value=7.6e-21 Score=172.94 Aligned_cols=261 Identities=16% Similarity=0.175 Sum_probs=170.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++.+|+.++-...+..+..+.+..-...|.++. ++.++. .|++++++.+++ +++++
T Consensus 91 ~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~v 167 (386)
T PRK07550 91 EQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP---RTRAI 167 (386)
T ss_pred ceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc---cCcEE
Confidence 357777777777655554554433222222233322 122332 268889998873 56676
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccc-cccCC---CCCcEEEeccccc-CCcccc
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLA-SDWEE---VRPDMVILGKALG-GGVIPV 138 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~-~~~~~---~~~d~~s~sK~~~-~G~~~~ 138 (306)
++++++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+. ... ....+ ....+.|+||.++ +|+ |+
T Consensus 168 ~~~~P~NPtG~~-~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-Ri 245 (386)
T PRK07550 168 ALVTPNNPTGVV-YPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGH-RV 245 (386)
T ss_pred EEeCCCCCCCcc-cCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCccc-ce
Confidence 666677888865 5799999999999999999999999987633221 111 11111 1233559999999 899 99
Q ss_pred eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
||+++++++++.+.........+.+.+++.++..+++.+.. ++..++++++.+.+.+.|+.. +.+. ..+..|.
T Consensus 246 G~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~-~~~~g~~ 320 (386)
T PRK07550 246 GAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----PGWE-LLASGAY 320 (386)
T ss_pred EeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCce-eCCCceE
Confidence 99999999888777544444555677777777776654322 223444555555555555543 1121 2234567
Q ss_pred EEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 217 FNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
++|+.++.. ..++.++++.|+ ++||.+.|+ +.+++|+++. ..+++++++++++|.+.
T Consensus 321 ~~~~~~~~~--~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 321 FAYVRHPFP--DRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred EEEecCCCC--CCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 778877631 246788999875 579999885 2579999964 34788999999999764
No 159
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=172.68 Aligned_cols=221 Identities=17% Similarity=0.259 Sum_probs=152.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCCCCc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~~~d 123 (306)
+++.|++.++ +++++|+++.++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++.+.+..+ +. ...+....
T Consensus 151 ~~~~l~~~~~---~~~~~v~i~~p~NPtG~~-~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~ 226 (397)
T PRK07568 151 SKEEIEKLIT---PKTKAILISNPGNPTGVV-YTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDR 226 (397)
T ss_pred CHHHHHHhcC---ccceEEEEECCCCCCCcc-CCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCC
Confidence 4688888876 467888887788899854 578889999999999999999999999875554321 11 11122222
Q ss_pred ---EEEeccccc-CCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 124 ---MVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 124 ---~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
+.|+||.++ +|+ |+||++++ +++++.+..... ..++.+.+.+.++..+++.... +++.+.++++++.+.+.
T Consensus 227 ~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (397)
T PRK07568 227 VIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEE 304 (397)
T ss_pred EEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 349999999 799 99999984 677776543222 2356677777777777753211 22344555556666666
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH------CCceeccC---------CCCEEEEeCCCCC
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE------RGILAKPT---------HDTIVRLTPPLSI 261 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~------~Gi~~~~~---------~~~~lRi~~~~~~ 261 (306)
|++. ++.....+..|.++|+.++. .+..++++.|++ +||.+.|+ +.+++|++. ..
T Consensus 305 L~~~----~~~~~~~p~g~~~~~~~l~~----~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~ 374 (397)
T PRK07568 305 LNKI----PGVVCEKPKGAFYIIAKLPV----DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VL 374 (397)
T ss_pred HhcC----CCceecCCCcceEEEEecCC----CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eC
Confidence 6543 22222334556777888764 246688888876 58998874 136999994 45
Q ss_pred CHHHHHHHHHHHHHHHhhhcCC
Q 021893 262 SSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+.+++++++++|+++++ ++.+
T Consensus 375 ~~~~~~~~~~~l~~~l~-~~~~ 395 (397)
T PRK07568 375 NEEDLKRAMEILKEALE-KYNK 395 (397)
T ss_pred CHHHHHHHHHHHHHHHH-Hhhc
Confidence 78999999999999998 7654
No 160
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.87 E-value=3.7e-20 Score=169.13 Aligned_cols=211 Identities=17% Similarity=0.205 Sum_probs=150.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.++++++ +++++|++++++|++|.+.+ +++|.++|+++|+++++|++|+.. .. . .+.....+|+.
T Consensus 146 ~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~-~~--~--~~~~~~~~d~~ 213 (398)
T TIGR03392 146 DIRQLPELLT---PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQGVV-HG--P--PDVQALDIDFY 213 (398)
T ss_pred CHHHHHHHhc---cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcC-CC--C--CChhhcCCCEE
Confidence 7899999887 57899999999999999988 999999999999999999999721 11 1 22223456777
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCccC---------------------CCCCCHHHHHHHHHHHHHHhhcc-
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFGGNPLASAVAIASLDVIRDEK- 181 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~aa~~al~~~~~~~- 181 (306)
++| |.++ .. ++|++++++++++.+.+..... ..+.+..+..++.++++.+.+.+
T Consensus 214 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~ 291 (398)
T TIGR03392 214 AFSGHKLYG-PT-GIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDI 291 (398)
T ss_pred EEecccccC-CC-ceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 766 9665 33 6899999999887775432110 11445567777888888775533
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------
Q 021893 182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------- 249 (306)
Q Consensus 182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------- 249 (306)
..++..++.+++++.|+++ ++........+.++.+.++. ....++.+.|.++||.++++.
T Consensus 292 ~~i~~~~~~l~~~l~~~l~~l----~g~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~ 363 (398)
T TIGR03392 292 AAAEAWSVSLADLAEERLAQL----PGFRSFRCPGSSLLAFDFAG----VHHSDLAALLAESGIALRAGQHCAQPLMAAL 363 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCCCcEEEEEeCC----cCHHHHHHHHHhCCEEEecCccchHHHHHHh
Confidence 4455555566665555543 22221111234455655542 456789999999999998642
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 250 --DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++++|++++.++|++|++.+++.|+++++
T Consensus 364 g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~ 394 (398)
T TIGR03392 364 GVSGTLRASFAPYNTQQDVDALVDAVGAALE 394 (398)
T ss_pred CCCCEEEEEeeccCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999887
No 161
>PRK07337 aminotransferase; Validated
Probab=99.87 E-value=9.5e-21 Score=172.43 Aligned_cols=218 Identities=14% Similarity=0.167 Sum_probs=151.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE-
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM- 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~- 124 (306)
|++++++.++ +++++++++.++|++|.+ .+.+.+++|.++|+++++++|+||+|.++...+...+. .....++
T Consensus 152 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi 225 (388)
T PRK07337 152 TAADVEAAWG---ERTRGVLLASPSNPTGTS-IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVI 225 (388)
T ss_pred CHHHHHhhcC---ccceEEEEECCCCCCCcC-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEE
Confidence 6788888886 467888888888999954 57999999999999999999999999977554432211 1222333
Q ss_pred --EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHH
Q 021893 125 --VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLF 198 (306)
Q Consensus 125 --~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~ 198 (306)
.|+||.++ +|+ |+||+++++++++.+.........+.+.+.+.++..+++.-. -.+..+.++++++.+.+.|+
T Consensus 226 ~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~ 304 (388)
T PRK07337 226 TINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALE 304 (388)
T ss_pred EEEechhhcCCchh-heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999997 899 999999999988887654333344567777777766664210 01234445555555555555
Q ss_pred HHHhhCCCcee-eEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCCCCCCHHHHH
Q 021893 199 KIQQQFPNYVK-EVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 199 ~~~~~~~~~~~-~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~ 267 (306)
+.. ... ..+..|+++|+.++... ...++.+++..++ ++||.+.|+ ..+++|++.. .+.++++
T Consensus 305 ~~~-----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~ 377 (388)
T PRK07337 305 SLG-----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLE 377 (388)
T ss_pred hcC-----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHH
Confidence 531 221 24567899999886410 0135678887755 679999874 2579999954 4788999
Q ss_pred HHHHHHHHHH
Q 021893 268 EGSKALHDVL 277 (306)
Q Consensus 268 ~~~~~l~~~l 277 (306)
+++++|.+++
T Consensus 378 ~~l~rl~~~l 387 (388)
T PRK07337 378 EAVARLGKLF 387 (388)
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 162
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=4e-21 Score=172.92 Aligned_cols=251 Identities=16% Similarity=0.111 Sum_probs=165.3
Q ss_pred ceEEEEecCCCCcccchhcc-cCCccccccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893 3 AIIVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE 72 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~ 72 (306)
..|++..|+.+|-...+..+ ..+.+..-...|.+++ ...+..+|++.++ . ++++++++++++|+
T Consensus 81 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~l~----~--~~~~~v~~~~p~NP 154 (357)
T TIGR03539 81 TAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADDPTELD----P--VGPDLIWLNSPGNP 154 (357)
T ss_pred CeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCChhhcC----c--cCccEEEEeCCCCC
Confidence 46888888888765544333 2322222222344433 2333344544332 1 46889999999999
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc------CCCCCcEEEeccccc-CCcccceeeEeC
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW------EEVRPDMVILGKALG-GGVIPVSAVLAD 144 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~------~~~~~d~~s~sK~~~-~G~~~~g~~~~~ 144 (306)
+|.. .+.+.+++|.++|++||+++|+||+|.++.+.+.... .+. ......+.||||.++ +|+ |+||++++
T Consensus 155 tG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~-R~G~~i~~ 232 (357)
T TIGR03539 155 TGRV-LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY-RAGFVAGD 232 (357)
T ss_pred cCcc-CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCce-eEEEEecC
Confidence 9965 5789999999999999999999999987654443221 110 011123349999996 899 99999999
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+++++.+........++.+.+++.++.++++... .+.....++++++.+.+.|++.+ .....+..|.++|+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g-----~~~~~p~~~~~~~~~~~ 307 (357)
T TIGR03539 233 PALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAG-----FRIDHSEAGLYLWATRG 307 (357)
T ss_pred HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCcCCCccEEEEEECC
Confidence 9998887654444456677888877777774311 12234555566666666665532 22233446677777654
Q ss_pred cCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 224 KTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
. +..++.+.|.++||.+.|+ +.+++|++. ..+++++++++++|
T Consensus 308 ~-----~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~~~~~i~~~~~~l 356 (357)
T TIGR03539 308 E-----DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TATDERIAAAVARL 356 (357)
T ss_pred C-----CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cCCHHHHHHHHHhh
Confidence 2 4567889999999999885 257999995 45788999998876
No 163
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.87 E-value=2.3e-21 Score=174.91 Aligned_cols=216 Identities=24% Similarity=0.257 Sum_probs=154.8
Q ss_pred CCCHHHHHHHHHhcC-C--cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccC
Q 021893 44 FGDITALEKIFKESG-D--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWE 118 (306)
Q Consensus 44 ~~d~~~le~~i~~~~-~--~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~ 118 (306)
+.|++.|++.+++.+ + ++++++++.++|++|.. .+.+.+++|.++|++|++++|+||+|.++......+ + ....
T Consensus 129 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~-~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 207 (363)
T PF00155_consen 129 HLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSV-LSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLL 207 (363)
T ss_dssp EETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHH
T ss_pred cccccccccccccccccccccceeeecccccccccc-cccccccchhhhhcccccceeeeeceeccccCCCccCcccccc
Confidence 458999999999632 1 46888888899999965 589999999999999999999999999764443321 1 1111
Q ss_pred CC---CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHH
Q 021893 119 EV---RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHL 189 (306)
Q Consensus 119 ~~---~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~ 189 (306)
.. ...+.|+||.++ .|+ |+||+++++++++.++........ +.+.+.++.+.+..... ++..++++++
T Consensus 208 ~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 284 (363)
T PF00155_consen 208 DEDDNVIVVGSLSKSFGLPGL-RVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLREN 284 (363)
T ss_dssp TTTSTEEEEEESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeecccccccccc-ccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHH
Confidence 11 223449999998 899 999999999999888753333322 66666655555544331 2345566666
Q ss_pred HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCCHH
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSN 264 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t~~ 264 (306)
.+.+++.|++. +........|.++|+.+.. .+..++++.|+++ ||.+.|+ ..+++|+++ ...+++
T Consensus 285 ~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e 354 (363)
T PF00155_consen 285 RDLLREALEEI-----GITVLPPEAGFFLWVRLDP----NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEE 354 (363)
T ss_dssp HHHHHHHHHHT-----TSEEEHHSBSSEEEEEESH----HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHH
T ss_pred HHHHHHHHHHh-----hhheeeccCccEEEEEccc----chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHH
Confidence 66666666665 2333444578888877764 3678999999999 9999983 377999997 588999
Q ss_pred HHHHHHHHH
Q 021893 265 ELQEGSKAL 273 (306)
Q Consensus 265 ~i~~~~~~l 273 (306)
++++++++|
T Consensus 355 ~~~~~~~~l 363 (363)
T PF00155_consen 355 DLEEALERL 363 (363)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhC
Confidence 999999986
No 164
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.87 E-value=6.5e-21 Score=177.86 Aligned_cols=269 Identities=15% Similarity=0.133 Sum_probs=173.3
Q ss_pred ceEEEEecCCCCcccchhccc-CCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhc---CCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKES---GDQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~---~~~ 60 (306)
..|++.+|+.++-...+..+. .+.+..-...|.|+. ++.++. .|+++|++.++.. +.+
T Consensus 139 ~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 218 (481)
T PTZ00377 139 SDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGIT 218 (481)
T ss_pred hhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCC
Confidence 468899999999887777665 343333333455544 122221 2679999998742 126
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc-ccc-cccc--CCC---------CCcEEEe
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RML-ASDW--EEV---------RPDMVIL 127 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g-~~~-~~~~--~~~---------~~d~~s~ 127 (306)
+++++++.++|+||.+ .+.+.+++|.++|++||+++|+||+|..+.+.+ ..+ ++.. .++ ...+.||
T Consensus 219 ~k~l~l~~P~NPTG~~-~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~ 297 (481)
T PTZ00377 219 PRALVVINPGNPTGQV-LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHST 297 (481)
T ss_pred eeEEEEECCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecC
Confidence 8877777778999954 689999999999999999999999999764432 221 1100 011 1123389
Q ss_pred cccc-c-CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h----------ccHHHHHHHHH
Q 021893 128 GKAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D----------EKLAERSAHLG 190 (306)
Q Consensus 128 sK~~-~-~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~----------~~~~~~~~~~~ 190 (306)
||.+ + +|+ |+||+++ ++++++.+..... ..++.+.+++.++..+++... + ....+++++++
T Consensus 298 SK~~~~~~Gl-RiG~~~~~~~p~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr 375 (481)
T PTZ00377 298 SKGIIGECGR-RGGYFELTNIPPEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRA 375 (481)
T ss_pred CcccccCCcC-ceEEEEEeCCCHHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9985 6 899 9999986 8888888765432 344677888888887774210 0 11122334445
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh---------hhHHHHH-HHHHHCCceeccCC-------CCEE
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP---------VSAYDIC-LKMKERGILAKPTH-------DTIV 253 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---------~~~~~~~-~~l~~~Gi~~~~~~-------~~~l 253 (306)
+.+.+.|+.+ +++....+..|+++|+.+.-.... .....++ ..|.++||.+.|+. .+++
T Consensus 376 ~~l~~~L~~~----~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~ 451 (481)
T PTZ00377 376 ELLTDELNKI----EGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHF 451 (481)
T ss_pred HHHHHHHhcC----CCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEE
Confidence 5555555443 223334455678888655310000 0123444 44556799999852 3589
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 254 RLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 254 Ri~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|++. ..+++++++++++|+++++ ++
T Consensus 452 Rls~--~~~~e~l~~~l~rl~~~~~-~~ 476 (481)
T PTZ00377 452 RITI--LPPEEQIEEMVKKIKEFHE-SF 476 (481)
T ss_pred EEEE--CCCHHHHHHHHHHHHHHHH-HH
Confidence 9994 4778899999999999988 54
No 165
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.87 E-value=6e-21 Score=174.51 Aligned_cols=217 Identities=15% Similarity=0.150 Sum_probs=146.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc------ccccccC-
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR------MLASDWE- 118 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~------~~~~~~~- 118 (306)
|++.+++.++++.+++++++++.+||+||.. .+++.+++|.++|++||+++|+||+|.++.+.+. ...+...
T Consensus 162 d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 240 (404)
T PTZ00376 162 DFDGMLEDLRTAPNGSVVLLHACAHNPTGVD-PTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERG 240 (404)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcC
Confidence 7899999997653456788888999999955 6899999999999999999999999998754331 1111111
Q ss_pred CCCCcEEEeccccc-CCcccceee---EeCHHHHhhc----CCCCccCCCCCCHHHHHHHHHHHHHHh--------hccH
Q 021893 119 EVRPDMVILGKALG-GGVIPVSAV---LADKEVMLCI----QPGEHGSTFGGNPLASAVAIASLDVIR--------DEKL 182 (306)
Q Consensus 119 ~~~~d~~s~sK~~~-~G~~~~g~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~ 182 (306)
.....+.||||.++ +|+ |+||+ .+++++++.+ .........+.+.+++.++..+++.-. ..+.
T Consensus 241 ~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 319 (404)
T PTZ00376 241 VEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEM 319 (404)
T ss_pred CcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 12234459999999 999 99998 4677654433 221112222345677777776664321 0123
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCCCCC
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSI 261 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~~~~ 261 (306)
.++++++++.+.+.|++..... .+....+..|.++|+.++ .++++.|.++ ||.+.|++ |++.. ..
T Consensus 320 ~~~~~~~r~~l~~~L~~~~~~~-~~~~~~p~gg~f~~~~~~--------~~~~~~L~~~~~v~v~p~~----Ris~~-~~ 385 (404)
T PTZ00376 320 SGRIQNMRQLLYDELKALGSPG-DWEHIINQIGMFSFTGLT--------KEQVERLIEKYHIYLLDNG----RISVA-GL 385 (404)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-cccccccCceEEEecCCC--------HHHHHHHHHhCCEeecCCC----eEEEe-cc
Confidence 3455666666666666652110 122223556777777553 3678888877 99998873 99852 27
Q ss_pred CHHHHHHHHHHHHHHHh
Q 021893 262 SSNELQEGSKALHDVLE 278 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~ 278 (306)
+.++++.++++|++++.
T Consensus 386 ~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 386 TSKNVDYVAEAIHDVVR 402 (404)
T ss_pred CHHhHHHHHHHHHHHHh
Confidence 89999999999998875
No 166
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=3.4e-20 Score=169.29 Aligned_cols=221 Identities=15% Similarity=0.120 Sum_probs=146.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC-C--CCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-E--VRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~-~--~~~ 122 (306)
|++.+++.++ ++++++++++++|++|.. .+.+.+++|.++|+++|+++|+||+|.++...+...+.... . ...
T Consensus 155 d~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi 230 (398)
T PRK08363 155 DIDDIRKKIT---EKTKAIAVINPNNPTGAL-YEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVI 230 (398)
T ss_pred CHHHHHhhCC---cceEEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEE
Confidence 6788888776 467888888889999965 47999999999999999999999999876444432211111 1 112
Q ss_pred cEEEeccccc-CCcccceeeEe--CHHHHhhcCCCC---ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 123 DMVILGKALG-GGVIPVSAVLA--DKEVMLCIQPGE---HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 123 d~~s~sK~~~-~G~~~~g~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
.+.||||.++ +|+ |+||+++ ++++++.+.... ....++.+.+++.++..+++.... .+..++++++++.+.
T Consensus 231 ~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~ 309 (398)
T PRK08363 231 VMNGLSKVYFATGW-RLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIY 309 (398)
T ss_pred EEecchhccCCccc-eEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 2349999976 899 9999987 665555433211 112345677777777777753111 223455566666666
Q ss_pred HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHH-HHHHHCCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893 195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC-LKMKERGILAKPT------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~ 267 (306)
+.|++. +++....+..|.++|+.++... .....+++ +.|.++||.+.|+ +++++|++. ..++++++
T Consensus 310 ~~L~~~----~~~~~~~p~g~~~~~~~l~~~~-~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~ 382 (398)
T PRK08363 310 KRLNEI----PGISTTKPQGAFYIFPRIEEGP-WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILE 382 (398)
T ss_pred HHHhcC----CCCEecCCCeEEEEEEEeccCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHH
Confidence 665543 2222233456666776676411 11344554 5557889999875 257999994 56789999
Q ss_pred HHHHHHHHHHh
Q 021893 268 EGSKALHDVLE 278 (306)
Q Consensus 268 ~~~~~l~~~l~ 278 (306)
+++++|+++++
T Consensus 383 ~~l~~l~~~~~ 393 (398)
T PRK08363 383 EAMDRFEEFMR 393 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999999887
No 167
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=8.2e-21 Score=171.62 Aligned_cols=213 Identities=21% Similarity=0.237 Sum_probs=147.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~ 124 (306)
|++.+++.++ +++++|+++.++|++|.+.+ .+.++++.+.|+ +|+++|+||+|.++.+.+. ...+...+...++
T Consensus 143 ~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 143 DLDAMLAAVT---PRTRLVFIANPNNPTGTYLP-AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CHHHHHHHhC---CCCcEEEEeCCCCCCCcCCC-HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 7899998886 46788888899999997765 555555555543 5999999999986544332 1112212222333
Q ss_pred ---EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHH
Q 021893 125 ---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 125 ---~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~ 199 (306)
.|+||.++ +|+ |+||+++++++++.+.... ..+..+.+++.++.+.++... -++..++++++.+.+++.|++
T Consensus 218 i~~~S~SK~~g~~G~-RiG~l~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 294 (367)
T PRK02731 218 VVTRTFSKAYGLAGL-RVGYGIAPPEIIDALNRVR--QPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAE 294 (367)
T ss_pred EEEeeehHhhcCccc-ceeeeeCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999998 899 9999999999988876532 245567777777777665311 123444555555566666655
Q ss_pred HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.+ ... .+..|.++|+.++. ..++.++++.|.++||.+.++. ++++|++++ +.++++.+++.|++
T Consensus 295 ~g-----~~~-~~~~g~~~~i~~~~---~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 295 LG-----LEY-IPSVGNFILVDFDD---GKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred CC-----Ccc-CCCCceEEEEECCC---CCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHH
Confidence 42 211 23467888988753 3467889999999999999862 578999953 78899999999988
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+++
T Consensus 363 ~~~ 365 (367)
T PRK02731 363 FLA 365 (367)
T ss_pred HHh
Confidence 775
No 168
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.86 E-value=4.9e-20 Score=165.62 Aligned_cols=220 Identities=16% Similarity=0.176 Sum_probs=158.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++++++.++++ ++++.+++.++++++|.+.+ +++|.++|++||+++|+|++++ ++. ..+....++.+..+
T Consensus 111 ~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~--~~~~~~~~~~d~~~ 182 (355)
T TIGR03301 111 PDLNRIEEALAAD-PDITHVATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGA--IPIDIEELDVDALI 182 (355)
T ss_pred CCHHHHHHHHHhC-CCceEEEEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCC--cccchhhcCccEEE
Confidence 3799999999865 45677777778888898887 9999999999999999999886 321 22333444444445
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCC-----------------ccCCCCCCHHHHHHHHHHHHHHhhcc----HH
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------HGSTFGGNPLASAVAIASLDVIRDEK----LA 183 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~aa~~al~~~~~~~----~~ 183 (306)
.+++|+++|+. ++|++++++++++.+.... ....++.+...+.++.++++.+.+++ ..
T Consensus 183 ~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~ 261 (355)
T TIGR03301 183 ASANKCLEGVP-GFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARI 261 (355)
T ss_pred ecCCcccccCC-ceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHH
Confidence 68889998777 7899999999888765210 11234567777778788888775433 45
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCC
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPL 259 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~ 259 (306)
++++++++++++.|++++.. .... ....+.++++.++... ..+..++.+.|.++||.+.++. .+++|++++.
T Consensus 262 ~~~~~~~~~~~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~ 337 (355)
T TIGR03301 262 ARYRRNRELLVDGLRALGFQ---PLLPERWQSPIIVSFLYPDDP-DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIG 337 (355)
T ss_pred HHHHHHHHHHHHHHHHcCCe---eecCCCCCCCcEEEEECCCCC-cchHHHHHHHHHHCCEEEECCccccccEEEEecCC
Confidence 67778888888888775311 1111 1234556677665311 1345689999999999998864 2789999888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 021893 260 SISSNELQEGSKALHDVL 277 (306)
Q Consensus 260 ~~t~~~i~~~~~~l~~~l 277 (306)
.+++++++.+++.|++++
T Consensus 338 ~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 338 EIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCHHHHHHHHHHHHhhC
Confidence 889999999999998753
No 169
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=7.4e-21 Score=171.39 Aligned_cols=209 Identities=16% Similarity=0.124 Sum_probs=143.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccc---cccCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLA---SDWEEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~---~~~~~~~ 121 (306)
|++.+++.++ +++++++++.++|++|.+. +.+.+.++.+.|+ +|+++|+||+|.++...+. ... .+..+..
T Consensus 140 d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 140 DLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred CHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 7888888776 4678888888899999776 4555555555553 6999999999987643321 111 1122222
Q ss_pred CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~ 199 (306)
..+.||||.++ +|+ |+||+++++++++.+.... .++..+.+++.++.++++.-. .+...+.+++..+.+.+.|++
T Consensus 215 i~~~S~SK~~g~~Gl-RiG~~v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 291 (359)
T PRK03158 215 IVLRTFSKAYGLAAL-RVGYGIASEELIEKLNIAR--PPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE 291 (359)
T ss_pred EEEEechHhhcCcch-hhehhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33459999999 899 9999999999988876533 246678888888888875311 012233334444444444443
Q ss_pred HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
. +.. ..+..|.++|+.+. .+..++++.|.++||.+.|+ .++++|++. .+.++++.++++|++
T Consensus 292 ~-----~~~-~~~~~g~~i~~~~~-----~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~ 357 (359)
T PRK03158 292 Y-----GLF-YYPSQTNFIFVDTG-----RDANELFEALLKKGYIVRSGAALGFPTGVRITI---GLKEQNDKIIELLKE 357 (359)
T ss_pred C-----CCe-eCCCcCcEEEEECC-----CCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEec---CCHHHHHHHHHHHHH
Confidence 3 121 23456778887664 24678999999999999985 368999983 378999999999987
Q ss_pred H
Q 021893 276 V 276 (306)
Q Consensus 276 ~ 276 (306)
+
T Consensus 358 ~ 358 (359)
T PRK03158 358 L 358 (359)
T ss_pred h
Confidence 5
No 170
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.86 E-value=2e-20 Score=169.15 Aligned_cols=265 Identities=11% Similarity=0.064 Sum_probs=166.5
Q ss_pred eEEEEecCCCCcccchhcccCCcccc----ccCCCCC-----C--CcccccCC-------CHHHHHHHHHhcC----CcE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAI----RGFGPLL-----P--GHLKVDFG-------DITALEKIFKESG----DQI 61 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~----~~~~~~~-----~--~~~~~~~~-------d~~~le~~i~~~~----~~~ 61 (306)
.+++++|++++......++..+.... ..+.+.+ . .+..+|++ |+++|++.++... +++
T Consensus 68 ~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 147 (370)
T TIGR02539 68 EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPP 147 (370)
T ss_pred ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCc
Confidence 45667777777655555543322111 0100111 1 13455664 8999999997421 357
Q ss_pred EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893 62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV 141 (306)
Q Consensus 62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~ 141 (306)
++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. +..+. ....++.+.-+.|++|++++|. |+||+
T Consensus 148 ~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea~~~-g~~~~--~~~~~~~di~v~s~sK~~~~~g-~~G~l 219 (370)
T TIGR02539 148 VLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCAYTV-GRMPV--SAKEIGADFIVGSGHKSMAASG-PCGVL 219 (370)
T ss_pred EEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECcccc-CCcCC--CHHHcCCCEEEeeCcccccCCC-CEEEE
Confidence 88999999999999988 99999999999999999999983 11111 1112223333458999999776 89999
Q ss_pred EeCHHHHhhcCCCCccCCC--------CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893 142 LADKEVMLCIQPGEHGSTF--------GGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 212 (306)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 212 (306)
++++++++.+........+ .....++.++.++++...+. +...+..++.+++++.|++++.. .....+
T Consensus 220 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~ 296 (370)
T TIGR02539 220 GMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIGFI---QLGQKP 296 (370)
T ss_pred EECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcE---EEccCC
Confidence 9999999887754321111 11112444555556543221 11222334456788888876321 000113
Q ss_pred EeeeEEEEEEecC-----CChhhHHHHHHHHHHCCce-eccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 213 GRGLFNAVEFDKT-----ALPVSAYDICLKMKERGIL-AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 213 ~~g~~~~i~~~~~-----~~~~~~~~~~~~l~~~Gi~-~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
....++.+.++.. +.......+.+.|+++||. ++++.++++|+++. ..+++++++++++|+++++ ++
T Consensus 297 s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~-~~ 369 (370)
T TIGR02539 297 KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVE-EY 369 (370)
T ss_pred CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHHHHHH-hc
Confidence 4556666655421 0012345789999999997 77765679999974 5799999999999999887 53
No 171
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.86 E-value=2.7e-20 Score=165.77 Aligned_cols=251 Identities=15% Similarity=0.114 Sum_probs=161.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA 73 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~ 73 (306)
..|++..|+.++-...+.. .+.+..-...|.++. ...++. +++++++.++ ++++++++.++|+|
T Consensus 65 ~~I~it~Gs~~al~~~~~~--~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~----~~~~v~l~nP~NPT 137 (330)
T PRK05664 65 PQLLPVAGSQAAIQALPRL--RAPGRVGVLSPCYAEHAHAWRRAGHQVREL-DEAEVEAALD----SLDVLVVVNPNNPT 137 (330)
T ss_pred CCEEECcCHHHHHHHHHHc--cCCCEEEEcCCChHHHHHHHHHcCCeEEEe-chhhHhhhhc----CCCEEEEeCCcCCC
Confidence 3578888888886555432 222222333344433 111222 3456776664 34444444456889
Q ss_pred CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcC
Q 021893 74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQ 152 (306)
Q Consensus 74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~ 152 (306)
|.+ .+.+.+++|.++|+++|+++|+||+|.++............+....+.||||.++ +|+ |+||+++++++++.+.
T Consensus 138 G~~-~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~~~l~~~~~ 215 (330)
T PRK05664 138 GRR-FDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGA-RLGFVLAEPALLRALA 215 (330)
T ss_pred CCc-cCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCc-ceEEEEeCHHHHHHHH
Confidence 865 5788999999999999999999999986632222222221111223449999999 999 9999999999988877
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893 153 PGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231 (306)
Q Consensus 153 ~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 231 (306)
.... .+..+.+.+.++.++++... .+...+.++++++.+.+.|++.+ . ....+.+.++|+..+ +.
T Consensus 216 ~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-----~-~~~~~~~~f~~~~~~------~~ 281 (330)
T PRK05664 216 ELLG--PWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-----L-TPAGGCALFQWVRTE------DA 281 (330)
T ss_pred HhcC--CCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-----C-cccCCcceEEEEecC------CH
Confidence 5322 34556777777777775422 12345566666666666666541 1 112233366666543 45
Q ss_pred HHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 232 YDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 232 ~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+.|.++||.+... ..+++|++.. .+.++++++.+.|+++.+
T Consensus 282 ~~~~~~l~~~gi~v~~f~~~~~iRis~~--~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 282 AALHEFLARRGILTRLFEQPASLRFGLP--ADEADWARLDQALLAYRK 327 (330)
T ss_pred HHHHHHHHHCCeEEEECCCCCeEEEECC--CCHHHHHHHHHHHHHHHh
Confidence 78899999999999864 3579999944 367888888888877665
No 172
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.86 E-value=4.9e-20 Score=168.48 Aligned_cols=264 Identities=16% Similarity=0.177 Sum_probs=168.5
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++.+|+.+|...++.++..+....-...|.++. +..++. .|++.+++.+. ++++++
T Consensus 97 ~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v 173 (403)
T TIGR01265 97 DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD---EKTVAI 173 (403)
T ss_pred HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC---cCccEE
Confidence 357888888888766666554332222222233321 122221 26889988886 467788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-C--CCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-E--VRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-~--~~~d~~s~sK~~~-~G~~~~g 139 (306)
++++++|++|.. .+.+.+++|.++|+++|+++|+||+|.++.+.+..+ +...+ . ....+.||||.++ +|+ |+|
T Consensus 174 ~i~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG 251 (403)
T TIGR01265 174 VVINPSNPCGSV-FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW-RLG 251 (403)
T ss_pred EEecCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcc-eEE
Confidence 888888999954 578889999999999999999999999875554321 11111 1 1223449999976 899 999
Q ss_pred eeEeC-H-H-----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893 140 AVLAD-K-E-----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVK 209 (306)
Q Consensus 140 ~~~~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 209 (306)
|++++ + + +++.+..... ..+..+.+.+.++..+++.... ++..++++++++.+.+.|+.. ++...
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~ 326 (403)
T TIGR01265 252 WIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDI----PGLVC 326 (403)
T ss_pred EEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC----CCcee
Confidence 99873 2 2 3333332211 2344577777777777753111 223444455555555555442 22322
Q ss_pred eEEEeeeEEEEEEecCCC--hhhHHHHHHHH-HHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 210 EVRGRGLFNAVEFDKTAL--PVSAYDICLKM-KERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 210 ~~~~~g~~~~i~~~~~~~--~~~~~~~~~~l-~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..+..|+++|+.++.... ..+..++++.+ .++||.+.|+ .++++|++. ..+++++++++++|.++++
T Consensus 327 ~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 327 PKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITI--TVPESMLEEACSRIKEFCE 400 (403)
T ss_pred cCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 346678899998864210 12466788886 4779999986 368999995 4578899999999999887
No 173
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.86 E-value=1.1e-19 Score=163.90 Aligned_cols=220 Identities=13% Similarity=0.125 Sum_probs=159.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.++++++++ ++++++.+..+++++|.+.+ +++|.++|++||+++++|++|+ +|. ..+....++.+..+.
T Consensus 116 d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~~-~g~--~~~~~~~~~~D~~~~ 187 (363)
T TIGR02326 116 DVVEVEAILAAD-PAITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMSS-FGG--IPIDIAELHIDYLIS 187 (363)
T ss_pred CHHHHHHHHhhC-CCccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEcccc-ccC--cccchhhcCccEEEe
Confidence 789999999865 35677888888999999998 9999999999999999999986 322 233344444433344
Q ss_pred EecccccCCcccceeeEeCHHHHhhcCCCC------------------ccCCCCCCHHHHHHHHHHHHHHhhc----cHH
Q 021893 126 ILGKALGGGVIPVSAVLADKEVMLCIQPGE------------------HGSTFGGNPLASAVAIASLDVIRDE----KLA 183 (306)
Q Consensus 126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~aa~~al~~~~~~----~~~ 183 (306)
+++|+++|+. ++|+++++++.++.+.+.. ....|+.+...+.+..++++.+..+ +..
T Consensus 188 s~~K~l~~p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~ 266 (363)
T TIGR02326 188 SANKCIQGVP-GFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARH 266 (363)
T ss_pred cCccccccCC-cceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 7779998877 8899999998877654310 1123456677777777888776543 356
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCC
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPL 259 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~ 259 (306)
++++++.+++++.|++++.. ..... ...+.+.++.+++.. ..+..++.+.|.++||.+.++. .+.+|++++.
T Consensus 267 ~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~ 342 (363)
T TIGR02326 267 QRYQQNQKTLVAGMRALGFE---PLLDDEIQSPIITSFYSPEDP-DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIG 342 (363)
T ss_pred HHHHHHHHHHHHHHHHcCCe---eccCcccCCceEEEEECCCCC-CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCC
Confidence 78888888888888776322 11111 123445666665311 1356789999999999998863 4789999877
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 021893 260 SISSNELQEGSKALHDVLE 278 (306)
Q Consensus 260 ~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.++++.++++|++++.
T Consensus 343 ~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 343 EVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CCCHHHHHHHHHHHHHHhC
Confidence 8899999999999998875
No 174
>PRK05839 hypothetical protein; Provisional
Probab=99.85 E-value=3.3e-20 Score=167.97 Aligned_cols=253 Identities=13% Similarity=0.058 Sum_probs=159.0
Q ss_pred ceEEEEecCCCCcccchhccc--CCccccccCCCCCCC-----------cccccCC-----CHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMS--CDNEAIRGFGPLLPG-----------HLKVDFG-----DITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~-----d~~~le~~i~~~~~~~~~v 64 (306)
..|++++|+.++-+..+.... .+....-...|.|+. ++.++.+ +++..+..+ ++++++
T Consensus 84 ~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~----~~~k~v 159 (374)
T PRK05839 84 NELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKEL----QEVDLV 159 (374)
T ss_pred ceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhh----ccccEE
Confidence 468888888877655544331 122222222344432 1233221 122222222 358888
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-c--------cCCCCCcEEEeccccc-CC
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-D--------WEEVRPDMVILGKALG-GG 134 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~--------~~~~~~d~~s~sK~~~-~G 134 (306)
+++.++|+||.+ .+.+.+++|.++|++||++||+||+|.++...+...++ . ..+....+.||||.++ +|
T Consensus 160 ~i~nP~NPTG~~-~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGRT-LSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCcc-cCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 888889999965 57999999999999999999999999976322221111 1 0112233459999987 89
Q ss_pred cccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893 135 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 214 (306)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 214 (306)
+ |+||+++++++++.+........++.+.+.+.++..++. .+++.+.. .+.++++.+.+...++ .. .+..
T Consensus 239 l-RiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~---~~~~~~~~~~~~~~l~-~~--~p~g 308 (374)
T PRK05839 239 L-RSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFF---RNIYAKNLKLAREILG-IT--IPPA 308 (374)
T ss_pred c-eeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHH---HHHHHHHHHHHHHhcC-CC--CCCe
Confidence 9 999999999998887654333345556666666665553 22222222 2222222222222221 21 4567
Q ss_pred eeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 215 GLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 215 g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|.++|+.+++ ..++++.|++ +||.+.|+ .++++|++. ..+.++++.++++|+++++
T Consensus 309 g~fi~~~~~~------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 309 TFYVWLPVDN------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eEEEEEeCCC------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence 8888987752 4578888875 89999985 148999995 4578999999999998875
No 175
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.85 E-value=3.9e-20 Score=164.74 Aligned_cols=211 Identities=18% Similarity=0.161 Sum_probs=143.5
Q ss_pred cccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC
Q 021893 41 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE 119 (306)
Q Consensus 41 ~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~ 119 (306)
..+++|++.+++.++ ++++++++.++|++|.+ ++.+.+++|.++|+++|+++|+||+|.++......... +..+
T Consensus 110 ~~~~~d~~~l~~~~~----~~~~v~i~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 184 (330)
T TIGR01140 110 VVELPDLDRLPAALE----ELDVLVLCNPNNPTGRL-IPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFP 184 (330)
T ss_pred EEEeCCHHHHHhhcc----cCCEEEEeCCCCCCCCC-CCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCC
Confidence 333448999998885 34566666678899865 58999999999999999999999999876433221111 1111
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L 197 (306)
....+.|+||.++ +|+ |+||+++++++++.+.... ..+..+.+++.++...++.-.- ++..++++++.+.+++.|
T Consensus 185 ~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 261 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGL-RLGFVVAHPALLARLREAL--GPWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALL 261 (330)
T ss_pred CEEEEEecchhhcCchh-hhhheeCCHHHHHHHHhcC--CCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 1222349999999 899 9999999999998887643 2455667777777666653211 223455555555565555
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSK 271 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~ 271 (306)
++. + .+...++.|.++|+.+++ ..++++.|+++||.+.|+ +.+++|+++ ....++ +.++.
T Consensus 262 ~~~----~-~~~~~~~~~~f~~~~~~~------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~-~~~~~ 327 (330)
T TIGR01140 262 ARL----G-GLEVVGGTALFLLVRTPD------AAALHEALARRGILIRDFDNFPGLDPRYLRFAL--PTDEEN-DRLEE 327 (330)
T ss_pred HhC----C-CceECCCCCeEEEEEcCC------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe--cCHHHH-HHHHH
Confidence 554 2 222334567888887652 468999999999999985 246899994 444455 77766
Q ss_pred HH
Q 021893 272 AL 273 (306)
Q Consensus 272 ~l 273 (306)
+|
T Consensus 328 ~l 329 (330)
T TIGR01140 328 AL 329 (330)
T ss_pred hh
Confidence 65
No 176
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=1e-19 Score=164.56 Aligned_cols=213 Identities=22% Similarity=0.312 Sum_probs=160.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
+++.+++.++ ++|++|.++.++|.+|.+.| +++|.++||++|+++++|.+|+ .|. ...+...+..|++
T Consensus 151 ~~~~~~~~i~---~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~----~~h-~~idv~~l~~Df~ 218 (405)
T COG0520 151 DLDALEKLIT---PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA----AGH-LPIDVQELGCDFL 218 (405)
T ss_pred CHHHHHHhcC---CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc----cCc-cCCCchhcCCCEE
Confidence 5788888777 78999999999999999999 9999999999999999999997 222 1234444567887
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc------------CCC----------CCCHHHHHHHHHHHHHHhh--
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG------------STF----------GGNPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~------------~~~----------~~~~~~~~aa~~al~~~~~-- 179 (306)
.|| |++.|.- ++|++++++++++.+.|...+ .++ +.+..+..+..++++.+.+
T Consensus 219 afsgHKwl~gP~-GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig 297 (405)
T COG0520 219 AFSGHKWLLGPT-GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG 297 (405)
T ss_pred EEcccccccCCC-ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh
Confidence 776 9888776 889999999999998664111 111 3345555566677777665
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------- 249 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------- 249 (306)
+++.++.+++.+++.+.|+++... .++... ..+.++.|.+. +.+..+++..|.++||.++.+.
T Consensus 298 ~~~i~~~e~~L~~~~~~~L~~~~~v---~i~g~~~~~r~~~vsF~v~----~~~~~dv~~~L~~~gI~vr~g~~ca~p~~ 370 (405)
T COG0520 298 MEAIEAHERELTEYLLEGLSELPGV---EIYGPPDADRGGIVSFNVK----GIHPHDVATLLDEKGIAVRAGHHCAQPLH 370 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCe---EEecCCcccCceEEEEEeC----CCCHHHHHHHHHhCCeEEEeccccccHHH
Confidence 456777777777777777776321 111222 35777777777 3678999999999998888652
Q ss_pred -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 250 -----DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 -----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
...+|+|++.++|++||+.+++.|++..+
T Consensus 371 ~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 371 RLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 23499999999999999999999988753
No 177
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.85 E-value=1.7e-20 Score=171.88 Aligned_cols=207 Identities=14% Similarity=0.143 Sum_probs=140.7
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc-ccCC---CCCcEEEeccccc-
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWEE---VRPDMVILGKALG- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~-~~~~---~~~d~~s~sK~~~- 132 (306)
+++++++++.++|+||. +.+.+.+++|.++|++|+++||+||+|.++...+.. .+. ...+ ....+.||||.++
T Consensus 175 ~~~k~i~l~nP~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 175 EKVDIIYLCFPNNPTGT-VLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred cCceEEEEeCCCCCcCC-cCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 46788888788899995 468999999999999999999999999987544421 111 1111 1233458999998
Q ss_pred CCcccceeeEeCHHHHhhcC-----------CCCccCCC-CCCHHHHHHHHHHHHHH-h--hccHHHHHHHHHHHHHHHH
Q 021893 133 GGVIPVSAVLADKEVMLCIQ-----------PGEHGSTF-GGNPLASAVAIASLDVI-R--DEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~aa~~al~~~-~--~~~~~~~~~~~~~~l~~~L 197 (306)
+|+ |+||+++++++++.+. .......+ ..+.+.+.++..+++.- . .++..+.++++++.+.+.|
T Consensus 254 pGl-RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 332 (409)
T PRK07590 254 TGT-RCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGL 332 (409)
T ss_pred cCc-eeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999886321 00111222 35667777766666421 0 1223455556666666666
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGS 270 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~ 270 (306)
+.. +.....+..|+++|+.+++ ..+..++++.|++ +||.+.|+ +.+++|++ +..+++++++++
T Consensus 333 ~~~-----~~~~~~~~g~~f~wi~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~l~~~l 402 (409)
T PRK07590 333 ESA-----GFEVYGGVNAPYIWVKTPD---GMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSRENVLEAM 402 (409)
T ss_pred Hhc-----CCceecCCcceEEEEECCC---CCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCHHHHHHHH
Confidence 654 1222223467788998874 3456778888875 69999875 24799999 456899999999
Q ss_pred HHHHHHH
Q 021893 271 KALHDVL 277 (306)
Q Consensus 271 ~~l~~~l 277 (306)
++|.+++
T Consensus 403 ~rl~~~~ 409 (409)
T PRK07590 403 ERIKKAL 409 (409)
T ss_pred HHHHhhC
Confidence 9998753
No 178
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=5.6e-20 Score=165.13 Aligned_cols=251 Identities=18% Similarity=0.175 Sum_probs=161.9
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v 66 (306)
..|++.+|+.++-...+..+..+.+..-...|.++. ++.++. .|++++++.++. .+++++++
T Consensus 77 ~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--~~~k~v~l 154 (351)
T PRK14807 77 TNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK--YQPKLVFL 154 (351)
T ss_pred ccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc--cCCCEEEE
Confidence 357777777776555544443332222122233222 122221 368999998874 36888888
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCcccceeeEeC
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLAD 144 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~ 144 (306)
++++|++|...+ .+++.++|++++.++|+||+|.++. ...... .+..+....+.||||.++ +|+ |+||++++
T Consensus 155 ~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~ 228 (351)
T PRK14807 155 CNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGL-RVGYAVAN 228 (351)
T ss_pred eCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchh-ceeeeecC
Confidence 889999998877 7777788888888999999998763 111111 111222233459999998 999 99999999
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 224 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~ 224 (306)
+++++.+..... .+..+.+++.++...++...-++..++++++++.+.+.|++. +++. ..+..|.++|+.++
T Consensus 229 ~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~----~g~~-~~~~~~~~~~i~~~- 300 (351)
T PRK14807 229 ENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI----PGIK-VYPSKTNFILVKFK- 300 (351)
T ss_pred HHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC----CCcE-ECcCCccEEEEEcC-
Confidence 999988765332 355577777777777753211223344455555555555432 2232 23455777787765
Q ss_pred CCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 225 TALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 225 ~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+..++++.|.++||.+.+. .++++|+++ .+.++.+.+++.|++++
T Consensus 301 -----~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 -----DADYVYQGLLERGILVRDFSKVEGLEGALRITV---SSCEANDYLINGLKELL 350 (351)
T ss_pred -----CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEc---CCHHHHHHHHHHHHHhh
Confidence 2567899999999998764 257899994 35678888888887754
No 179
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.7e-20 Score=173.85 Aligned_cols=269 Identities=14% Similarity=0.204 Sum_probs=164.1
Q ss_pred eEEEEecCCCCcccchhc-----ccCCccccccCCCCCCC-----------c--cccc-------CCCHHHHHHHHHhcC
Q 021893 4 IIVSCCGCFHGRTLAAIS-----MSCDNEAIRGFGPLLPG-----------H--LKVD-------FGDITALEKIFKESG 58 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~-----------~--~~~~-------~~d~~~le~~i~~~~ 58 (306)
.|++.+|+.+|-..+..+ +..+.+..-...|.++. . +.++ ..|++.++++++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~--- 239 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD--- 239 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---
Confidence 788999999887766554 34433333233344322 1 1221 126788888776
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhccccccccccccc-CCCCCcEEEeccccc-CC
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDW-EEVRPDMVILGKALG-GG 134 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~~s~sK~~~-~G 134 (306)
+++++++++.++|++|.+ .+++.+++|.++|++ +|++||+||+|..|......+ ... ......+.||||.++ +|
T Consensus 240 ~~tkai~l~nP~NPTG~v-~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~-~~~~~~~~I~v~SfSK~f~mtG 317 (527)
T PRK09275 240 PSIKALFLVNPSNPPSVA-MSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSL-FAVLPYNTILVYSFSKYFGATG 317 (527)
T ss_pred CCCCEEEEeCCcCCcCCC-CCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCH-HHhCCCCEEEEeehhhhccCcH
Confidence 578899988889999965 589999999999965 599999999999774211111 111 112233459999998 99
Q ss_pred cccceeeEeCHH-----HHhhc--------------------------------CCCCccCCCCCCHHHHHH-HHHHH-H
Q 021893 135 VIPVSAVLADKE-----VMLCI--------------------------------QPGEHGSTFGGNPLASAV-AIASL-D 175 (306)
Q Consensus 135 ~~~~g~~~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~a-a~~al-~ 175 (306)
| |+||++++++ +++.+ +.....++.+.+.+.+.+ ++.++ .
T Consensus 318 ~-RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~a 396 (527)
T PRK09275 318 W-RLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFA 396 (527)
T ss_pred h-HHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 9 9999999876 43333 122233445556555554 32111 1
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCC-------------hhhHHHHHHHHHHC
Q 021893 176 VIRDEKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTAL-------------PVSAYDICLKMKER 241 (306)
Q Consensus 176 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~-------------~~~~~~~~~~l~~~ 241 (306)
.+... .++.++..+.++++.+.+...++ +.....+..+.++++++..... ..+..+|+.+|+++
T Consensus 397 ll~~~--~~~~~~~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e 474 (527)
T PRK09275 397 LLDEE--DAYKKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE 474 (527)
T ss_pred HHhCc--hHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence 12221 11222223333333322222221 1222345677888887764210 12467788888766
Q ss_pred -CceeccC-----CCCEEEEeCCCC-CCHHHHHHHHHHHHHHHhhhcCC
Q 021893 242 -GILAKPT-----HDTIVRLTPPLS-ISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 242 -Gi~~~~~-----~~~~lRi~~~~~-~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
||.+.|+ ..+++|++ +. .+++++.++.++|++.+. ++.+
T Consensus 475 ~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~-~y~~ 520 (527)
T PRK09275 475 TGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLD-EYYE 520 (527)
T ss_pred CCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHH-HHHH
Confidence 9999986 24789999 44 588999999999999998 7643
No 180
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.85 E-value=7.9e-20 Score=166.64 Aligned_cols=217 Identities=15% Similarity=0.180 Sum_probs=151.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH------cCCEEEEehhhhcccccccccc--ccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRMLA--SDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~------~gi~li~De~~~g~~~~g~~~~--~~~ 117 (306)
|+++++++++ ++++++++++++|++|.. .+.+.+++|.++|++ ||+++|+||+|.++...+.... ...
T Consensus 157 d~~~l~~~~~---~~~~~v~~~~p~NPtG~~-~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 232 (394)
T PRK06836 157 DLDALEAAIT---PKTKAVIINSPNNPTGVV-YSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKY 232 (394)
T ss_pred CHHHHHhhcC---cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHc
Confidence 6899999886 468888988899999965 578999999999999 8999999999997744432211 122
Q ss_pred CCCCCcEEEeccccc-CCcccceeeEeCHHHHhh------cCCCCcc-CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893 118 EEVRPDMVILGKALG-GGVIPVSAVLADKEVMLC------IQPGEHG-STFGGNPLASAVAIASLDVIRDEKLAERSAHL 189 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~ 189 (306)
++....+.|+||.++ +|+ |+||+++++++.+. +...... ..+..+.+.+.++...++. ....+.++++
T Consensus 233 ~~~~i~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~ 308 (394)
T PRK06836 233 YDNSIVVYSFSKSLSLPGE-RIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA---TVDVSIYKRN 308 (394)
T ss_pred cCcEEEEecchhhccCcce-eeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC---hHHHHHHHHH
Confidence 222233458999999 899 99999998775321 1111111 1234455666665544432 1124455666
Q ss_pred HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHH
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNE 265 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~ 265 (306)
++.+.+.|++. ++....+..|.++|+.++. .+..++++.|.++||.+.|+. .+++|+++. .++++
T Consensus 309 r~~l~~~L~~~-----g~~~~~~~gg~~~~~~~~~----~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~ 377 (394)
T PRK06836 309 RDLLYDGLTEL-----GFECVKPQGAFYLFPKSPE----EDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTET 377 (394)
T ss_pred HHHHHHHHHhC-----CCEeecCCceEEEEEeCCC----CCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHH
Confidence 66666666654 2333344567788887663 256778899999999999862 579999964 68999
Q ss_pred HHHHHHHHHHHHhhhcC
Q 021893 266 LQEGSKALHDVLELDLP 282 (306)
Q Consensus 266 i~~~~~~l~~~l~~~~~ 282 (306)
+++++++|+++++ ++.
T Consensus 378 ~~~~i~~l~~~l~-~~~ 393 (394)
T PRK06836 378 IERSLPAFEKLAK-EYK 393 (394)
T ss_pred HHHHHHHHHHHHH-Hhc
Confidence 9999999999998 764
No 181
>PRK09265 aminotransferase AlaT; Validated
Probab=99.85 E-value=9e-20 Score=166.84 Aligned_cols=223 Identities=13% Similarity=0.134 Sum_probs=146.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCC--CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEE--VR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~--~~ 121 (306)
|++++++.++ +++++++++.++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++.+.+... +. .... ..
T Consensus 157 d~~~l~~~~~---~~~~~v~l~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 232 (404)
T PRK09265 157 DLDDIRSKIT---PRTKAIVIINPNNPTGAV-YSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLC 232 (404)
T ss_pred CHHHHHHhcc---ccceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceE
Confidence 6888888886 467787777778899965 478999999999999999999999999875444221 11 1111 11
Q ss_pred CcEEEeccccc-CCcccceeeEe--CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHH---HHHHHHH
Q 021893 122 PDMVILGKALG-GGVIPVSAVLA--DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLA---ERSAHLG 190 (306)
Q Consensus 122 ~d~~s~sK~~~-~G~~~~g~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~---~~~~~~~ 190 (306)
..+.||||.++ +|+ |+||++. +++ +++.+... ....++.+.+++.++..+++.... +++. +++.+.+
T Consensus 233 i~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r 310 (404)
T PRK09265 233 VTFNGLSKAYRVAGF-RVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQR 310 (404)
T ss_pred EEEecchhhccCccc-ceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 22348899996 899 9999985 343 33333211 122345677777777777642111 1111 2344444
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC--hhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCC
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSIS 262 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t 262 (306)
+.+.+.|++. ++.....+..|+++|+.++.... ..+...+.+.|.++||.+.|+ .++++|++. ..+
T Consensus 311 ~~~~~~L~~~----~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~ 384 (404)
T PRK09265 311 DRAWELLNAI----PGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPR 384 (404)
T ss_pred HHHHHHHhcC----CCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCC
Confidence 4555555432 22333445678889988874210 113445677888999999875 257999995 578
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 021893 263 SNELQEGSKALHDVLELDL 281 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~~~~ 281 (306)
.+++++++++|+++++ ..
T Consensus 385 ~e~l~~~l~rl~~~l~-~~ 402 (404)
T PRK09265 385 VDDLEEAIGRIGRFLS-GY 402 (404)
T ss_pred HHHHHHHHHHHHHHHH-Hh
Confidence 9999999999999887 54
No 182
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.85 E-value=2.2e-19 Score=164.21 Aligned_cols=211 Identities=16% Similarity=0.152 Sum_probs=149.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++++++.++ +++++|++++++|++|.+.+ +++|.++|+++|+++++|++|+ ++.. .+... .+.+|+.
T Consensus 149 d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~--~~~~~--~~~~d~~ 216 (401)
T PRK10874 149 DVDLLPELIT---PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF--PADVQ--ALDIDFY 216 (401)
T ss_pred CHHHHHHhcC---cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc--cCCch--hcCCCEE
Confidence 7899999886 57899999999999999988 9999999999999999999996 1111 12222 3346665
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCCcc------------------C---CCCCCHHHHHHHHHHHHHHhhcc-
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG------------------S---TFGGNPLASAVAIASLDVIRDEK- 181 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~aa~~al~~~~~~~- 181 (306)
|++|.++ .. ++|++++++++++.+.+.... . ..+.+..++.++.++++.+.+.+
T Consensus 217 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~ 294 (401)
T PRK10874 217 AFSGHKLYG-PT-GIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDI 294 (401)
T ss_pred EEecccccC-CC-ccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCH
Confidence 5559664 33 578999999988876542110 0 11345667777778888775533
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------
Q 021893 182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------- 249 (306)
Q Consensus 182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------- 249 (306)
..++.+++.+++++.|+++ ++........+.++.+.++. ....++.+.|.++||.++++.
T Consensus 295 ~~~~~~~~~l~~~l~~~l~~~----~g~~~~~~~~~~i~~~~~~~----~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~ 366 (401)
T PRK10874 295 NQAESWSRSLATLAEDALAKL----PGFRSFRCQDSSLLAFDFAG----VHHSDLVTLLAEYGIALRAGQHCAQPLLAAL 366 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCCcEEEEEECC----cCHHHHHHHHHHCCcEEeccccchHHHHHHh
Confidence 4555556666666666543 22222112334456666542 346788999999999988642
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 250 --DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+++|++++..+|++|++.+++.|+++++
T Consensus 367 g~~~~iRiS~~~~nt~edid~ll~al~~~~~ 397 (401)
T PRK10874 367 GVTGTLRASFAPYNTQSDVDALVNAVDRALE 397 (401)
T ss_pred CCCCEEEEEecccCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999887
No 183
>PRK08637 hypothetical protein; Provisional
Probab=99.85 E-value=1.3e-19 Score=164.95 Aligned_cols=267 Identities=12% Similarity=0.113 Sum_probs=168.9
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC------------cccccC------CCHHHHHHHHHh-cCCcEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------------HLKVDF------GDITALEKIFKE-SGDQIAGF 64 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~------~d~~~le~~i~~-~~~~~~~v 64 (306)
.|++..|+.++-...+..+..+.+..-...|.++. ++.+|. .|++++++.++. ..+.+.++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~ 150 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIV 150 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEE
Confidence 46777888877766655555443322222232222 223332 268999988872 11345567
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHH-----cCCEEEEehhhhccccccccc-c-c-ccCCCCCc--EE---Eecccc
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSK-----YNILMIADEIQSGLARSGRML-A-S-DWEEVRPD--MV---ILGKAL 131 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~-----~gi~li~De~~~g~~~~g~~~-~-~-~~~~~~~d--~~---s~sK~~ 131 (306)
+++.++||||. +.+++.+++|.++|++ |++++|+||+|.++.+.+... + . ...+.... ++ |+||.+
T Consensus 151 ~~~~P~NPTG~-~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~ 229 (388)
T PRK08637 151 ILNFPNNPTGY-TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEE 229 (388)
T ss_pred EEeCCCCCCCC-CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccC
Confidence 77778999995 5689999999999886 999999999999875554321 1 1 11111122 22 799987
Q ss_pred c-CCcccceeeEeC------HHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893 132 G-GGVIPVSAVLAD------KEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 132 ~-~G~~~~g~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~ 200 (306)
+ +|+ |+||++.+ +++++.+... .....+..+.+++.++...++ +..+.+++++....++++.+.+
T Consensus 230 ~~pGl-RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~ 305 (388)
T PRK08637 230 FVWGF-RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKT 305 (388)
T ss_pred CCccc-ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHH
Confidence 7 899 99999853 5666665421 111234567778888777664 2233444444433343332221
Q ss_pred ---HhhC---CCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 201 ---QQQF---PNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 201 ---~~~~---~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
.... +.+....+..|.++|+.++. .++.++++.|+ ++||.+.+.+.+++|++... .+.++++.++++|
T Consensus 306 ~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~----~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l 380 (388)
T PRK08637 306 KEVLYDGKYDDAWQAYPFNSGYFMCLKLKG----VDAEELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSI 380 (388)
T ss_pred HHHHHhhCCCCCcccccccceEEEEecCCh----HHHHHHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHH
Confidence 1111 11223344678888988762 45778999996 56998877667899999643 5789999999999
Q ss_pred HHHHhhhc
Q 021893 274 HDVLELDL 281 (306)
Q Consensus 274 ~~~l~~~~ 281 (306)
.++++ .+
T Consensus 381 ~~~~~-~~ 387 (388)
T PRK08637 381 YKAIK-DL 387 (388)
T ss_pred HHHHH-hc
Confidence 99987 54
No 184
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.85 E-value=8.7e-20 Score=163.31 Aligned_cols=205 Identities=22% Similarity=0.233 Sum_probs=152.3
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----ccccCCCCCcEEEeccccc-C
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDWEEVRPDMVILGKALG-G 133 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~~~~~~~d~~s~sK~~~-~ 133 (306)
+++++|+++++++++|.. .+.+.+++|.++|+++|+++|+|++|+++...+... .....+....+.|++|.++ +
T Consensus 131 ~~~~~v~i~~~~~~tG~~-~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~ 209 (350)
T cd00609 131 PKTKLLYLNNPNNPTGAV-LSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLP 209 (350)
T ss_pred ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCc
Confidence 679999999999999965 578889999999999999999999999765544432 1222223333458999999 8
Q ss_pred CcccceeeEeCH-HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893 134 GVIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE 210 (306)
Q Consensus 134 G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 210 (306)
|. ++|++++++ ++++.++......++..+...+.++..+++... .+...++++++.+++++.|++.... ...
T Consensus 210 g~-~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~~~ 284 (350)
T cd00609 210 GL-RIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPL----VVV 284 (350)
T ss_pred cc-ceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCc----ccc
Confidence 98 999999998 788888765555556777788888777777652 2445667777777777777765322 113
Q ss_pred EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 211 VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 211 ~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
....|.++++.+.. ......+.+.|.++||.+.++ ...++|++++.. ++|++.++++|+
T Consensus 285 ~~~~g~~~~~~~~~---~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 285 KPSGGFFLWLDLPE---GDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred CCCccEEEEEecCC---CChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 45677888887764 224556677777889999976 567999998766 999999999886
No 185
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=3e-20 Score=168.47 Aligned_cols=210 Identities=12% Similarity=0.120 Sum_probs=144.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~ 124 (306)
|++++++.++. ++++++++++++|++|.+.+ .+++.++++.. +++|+||+|.+|...+.... .+..+....+
T Consensus 163 d~~~l~~~~~~--~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~ 235 (380)
T PLN03026 163 DVPRIVEAVET--HKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVL 235 (380)
T ss_pred CHHHHHHHHhc--cCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEE
Confidence 68899888843 46889998899999998876 55555555543 99999999997744332211 1111112233
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHh
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~ 202 (306)
-||||.++ +|+ |+||+++++++++.+..... .++.+.+++.++.++++... -++..+.+++.++++.+.|+.+.
T Consensus 236 ~SfSK~~glaGl-RiGy~~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~- 311 (380)
T PLN03026 236 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP- 311 (380)
T ss_pred ecchHhhcCccc-cceeeecCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 49999999 999 99999999999888765332 45667788888887774311 02234555566666666665541
Q ss_pred hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.....+..+.++++.++. ..++.++++.|.++||.+.++ .++++|+++. +.++++.+++.|+++
T Consensus 312 ----~~~~~p~~~~f~~~~~~~---~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 312 ----FLEPYPSDANFILCRVTS---GRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ----CCeECCCCCeEEEEECCC---CCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 222245667888887763 245678999999999999875 3579999943 677888888888654
No 186
>PRK03321 putative aminotransferase; Provisional
Probab=99.85 E-value=1.5e-20 Score=169.04 Aligned_cols=207 Identities=20% Similarity=0.253 Sum_probs=144.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhccccccccc-ccccCCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRML-ASDWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~-~~~~~~~~~ 122 (306)
|++.+++.++ ++++++++++++|++|.+.+ .+++.++|++ +++++|+||+|.++.+.+... ........+
T Consensus 134 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 134 DLDAMAAAIT---DRTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CHHHHHHhhc---cCCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 6889988886 46788888888999998876 5566666655 699999999999765443211 111111122
Q ss_pred c---EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH---HHHHHHH
Q 021893 123 D---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAH---LGEELRQ 195 (306)
Q Consensus 123 d---~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~---~~~~l~~ 195 (306)
+ +.|+||.++ +|+ |+||+++++++++.+... ...++.+.+++.++.++++.. +.+.++.++ ..+.+.+
T Consensus 207 ~vi~~~S~SK~~g~~Gl-RiG~~v~~~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~~r~~~~~ 281 (352)
T PRK03321 207 NVVVLRTFSKAYGLAGL-RVGYAVGHPEVIAALRKV--AVPFSVNSLAQAAAIASLAAE--DELLERVDAVVAERDRVRA 281 (352)
T ss_pred CEEEEecchHHhhhHHH-hhhhhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHH
Confidence 3 338999998 899 999999999999988753 345667888888887777532 222222322 2333444
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.|+.. ++. ..+..|.++|+.+.. ...++++.|.++||.+.+.+.+.+|+++ .+.+++++++++|++
T Consensus 282 ~L~~~-----~~~-~~~~~g~~i~i~l~~-----~~~~~~~~l~~~gI~v~~~~~~~iRi~~---~~~~~~~~~~~al~~ 347 (352)
T PRK03321 282 ALRAA-----GWT-VPPSQANFVWLPLGE-----RTADFAAAAAEAGVVVRPFAGEGVRVTI---GAPEENDAFLRAARA 347 (352)
T ss_pred HHHHC-----CCc-cCCCCCCEEEEeCCC-----CHHHHHHHHHHCCEEEEccCCCcEEEee---CCHHHHHHHHHHHHH
Confidence 44432 122 223457888887642 4678999999999999987677899983 588999999999998
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+++
T Consensus 348 ~~~ 350 (352)
T PRK03321 348 WRA 350 (352)
T ss_pred Hhc
Confidence 876
No 187
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=3.7e-20 Score=166.73 Aligned_cols=250 Identities=16% Similarity=0.165 Sum_probs=160.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++-...+.++..+....-...|.|+. +..++. .|++.+++.. ++++++
T Consensus 83 ~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~----~~~k~i 158 (357)
T PRK14809 83 EQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY----DGERIV 158 (357)
T ss_pred ceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh----cCCcEE
Confidence 357778888777665555554433322222333221 122222 1344444433 246788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCcccceeeE
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVL 142 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~ 142 (306)
++++++|++|.. .+.+.+++|.++|++ ++++|+||+|.+|...+.... .+..+....+.||||.++ +|+ |+||++
T Consensus 159 ~l~~p~NPTG~~-~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~ 235 (357)
T PRK14809 159 YLTSPHNPTGSE-IPLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGL-RLGYAV 235 (357)
T ss_pred EEeCCCCCCCcC-CCHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcch-hheeee
Confidence 888899999965 578888888888865 789999999998754333221 111222334559999998 999 999999
Q ss_pred eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
+++++++.+.... ..+..+.+++.++..+++. +++.++.++..+..++.+.+..... ..+..|+++|+.+
T Consensus 236 ~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~g~f~~~~~ 305 (357)
T PRK14809 236 VPEEWADAYARVN--TPFAASELACRAGLAALDD---DEHVERTVETARWAREYIREELDAP-----TWESAGNFVLAEV 305 (357)
T ss_pred cCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhcCc-----cCCCCCCEEEEEC
Confidence 9999998887532 3566677887777776642 2233333333333333333322211 2246788888876
Q ss_pred ecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 223 DKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+ +..++++.|.++||.+.++. ++++|++. . +.+++++++++|+++++
T Consensus 306 ~------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~--~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 306 G------DASAVAEAAQERGVIVRDCTSFGLPECIRITC--G-TREETERAVEVLNEVLA 356 (357)
T ss_pred C------CHHHHHHHHHHCCEEEEECccCCCCCeEEEec--C-CHHHHHHHHHHHHHHhc
Confidence 4 35678899999999999863 57999984 3 57899999999998875
No 188
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.85 E-value=9.9e-20 Score=167.26 Aligned_cols=223 Identities=16% Similarity=0.157 Sum_probs=150.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc--CCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW--EEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~--~~~~~ 122 (306)
|++.|+ +. ++++++++++++|+||.+ .+.+.+++|.++|++|++++|+||+|..+. ....+ .... .+...
T Consensus 170 d~~~l~--~~---~~~~~i~l~~P~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI 242 (416)
T PRK09440 170 DFEHLH--ID---EDTGAICVSRPTNPTGNV-LTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNII 242 (416)
T ss_pred CHHHcc--cC---CCceEEEEecCCCCCCcc-CCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeE
Confidence 566766 22 467888888889999965 589999999999999999999999997431 11111 0100 12223
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhc-----cHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE-----KLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~-----~~~~~~~~~~~~l~~~L 197 (306)
.+.||||...+|+ |+||+++++++++.+.........+.+.+.+.++..+++.-.-. .+.+.++++.+.+++.|
T Consensus 243 ~~~SfSK~~~pGl-RiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L 321 (416)
T PRK09440 243 LCMSLSKLGLPGV-RCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALL 321 (416)
T ss_pred EEecccccCCCcc-eEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3459999745899 99999999999888765444444556778888877776532110 12333444445555555
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----C--------CCEEEEeCCCCCCHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----H--------DTIVRLTPPLSISSN 264 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~--------~~~lRi~~~~~~t~~ 264 (306)
++..... +.....+..|.++|+.++.. ..+..++++.|.++||.+.|+ + .+++|++.. .+.+
T Consensus 322 ~~~l~~~-~~~~~~p~gg~fiw~~~~~~--~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~ 396 (416)
T PRK09440 322 RRYLPDE-PCLIHKPEGAIFLWLWFKDL--PITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDE 396 (416)
T ss_pred HHhcccC-CeEEecCCCceEEEEECCCC--CCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHH
Confidence 5442221 12223345688899988741 135678899999999999984 1 248999953 4789
Q ss_pred HHHHHHHHHHHHHhhhcC
Q 021893 265 ELQEGSKALHDVLELDLP 282 (306)
Q Consensus 265 ~i~~~~~~l~~~l~~~~~ 282 (306)
++++++++|+++++ ...
T Consensus 397 ~l~~~i~~l~~~~~-~~~ 413 (416)
T PRK09440 397 EIEKGIAILAEEVE-KAY 413 (416)
T ss_pred HHHHHHHHHHHHHH-HHh
Confidence 99999999999988 543
No 189
>PLN02231 alanine transaminase
Probab=99.85 E-value=5.2e-20 Score=172.53 Aligned_cols=270 Identities=11% Similarity=0.111 Sum_probs=171.4
Q ss_pred ceEEEEecCCCCcccchhcccC-CccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcC---Cc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSC-DNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESG---DQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~---~~ 60 (306)
..|++..|+.+|-......+.. +.+..-...|.|+. ++.++. .|+++|++.+++.. .+
T Consensus 192 e~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~ 271 (534)
T PLN02231 192 NDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGIT 271 (534)
T ss_pred ccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCC
Confidence 4677888888776666655542 22222223344443 122221 27899999997532 25
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cccc-cccc----CCC---C---CcEEEec
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-ASDW----EEV---R---PDMVILG 128 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~~~-~~~~----~~~---~---~d~~s~s 128 (306)
++++++..++|+||. +.+++.+++|.++|++||++||+||+|.++.+. +..+ ++.. .+. . ..+-|+|
T Consensus 272 ~k~ivl~nP~NPTG~-vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~S 350 (534)
T PLN02231 272 VRALVVINPGNPTGQ-VLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVS 350 (534)
T ss_pred eEEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccC
Confidence 788777777999995 568999999999999999999999999987553 3222 1111 111 1 1233889
Q ss_pred ccc-c-CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-------Hh-----hccHHHHHHHHHH
Q 021893 129 KAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-------IR-----DEKLAERSAHLGE 191 (306)
Q Consensus 129 K~~-~-~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-------~~-----~~~~~~~~~~~~~ 191 (306)
|.+ + +|+ |+||+.+ ++++++.+..... ...+.+..++.++...++. +. .+++.+.++++.+
T Consensus 351 K~~~g~pGl-RiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~ 428 (534)
T PLN02231 351 KGYYGECGK-RGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAK 428 (534)
T ss_pred cccccCCcc-ceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 987 4 799 9999976 6788887754332 2345566777766665531 11 1123456666666
Q ss_pred HHHHHHHHHHhhCCCceeeEEEeeeEEEEEE--ecCCC-------hhhHHHHHHHHH-HCCceeccCC-------CCEEE
Q 021893 192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--DKTAL-------PVSAYDICLKMK-ERGILAKPTH-------DTIVR 254 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~--~~~~~-------~~~~~~~~~~l~-~~Gi~~~~~~-------~~~lR 254 (306)
.+.+.|+++ +++....+..|+++|..+ +.... ......++..|+ +.||.+.|+. ..++|
T Consensus 429 ~l~~~L~~~----~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~R 504 (534)
T PLN02231 429 TLEDALNSL----EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFR 504 (534)
T ss_pred HHHHHHhcC----CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEE
Confidence 666666654 223344456677777443 32100 001234667676 4599999862 34699
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 255 LTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++ +..+++++++++++|.++++ ++-
T Consensus 505 it--~~~~~e~l~eal~RL~~~~~-~~~ 529 (534)
T PLN02231 505 CT--ILPQEDKIPAIVSRLTEFHK-SFM 529 (534)
T ss_pred EE--eCCCHHHHHHHHHHHHHHHH-HHH
Confidence 99 56789999999999999988 653
No 190
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.1e-19 Score=161.92 Aligned_cols=211 Identities=21% Similarity=0.256 Sum_probs=155.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++.+.+.+. +++++|+++.++|+||... +.+.++++.+.+.+ +.+||+||+|.+|... .. ........++
T Consensus 133 ~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-~~--~~l~~~~~nl 204 (356)
T COG0079 133 LDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPE-GGLVVIDEAYIEFSPE-SS--LELLKYPPNL 204 (356)
T ss_pred cCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-hh--hhhccCCCCE
Confidence 36777777777 4789999999999999765 67778888888888 9999999999988541 11 1111112223
Q ss_pred E---Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHH
Q 021893 125 V---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 125 ~---s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~ 199 (306)
+ ||||.|| +|+ |+||+++++++++.+.. ....|..+.+++.++.++++.-.. ++..+++.+.++++.+.|+.
T Consensus 205 ivlRTfSKa~gLAGl-RlGy~ia~~~~i~~l~~--vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~ 281 (356)
T COG0079 205 IVLRTFSKAFGLAGL-RVGYAIANPELIAALNK--VRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKA 281 (356)
T ss_pred EEEEecHHhhhcchh-ceeeccCCHHHHHHHHH--hcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 9999999 999 99999999999998876 445777889999999888865421 23445555555566665555
Q ss_pred HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
+. .....++.++++.+.++. .. ...+.+.|.++||+++.+. ++++|++ .-++++.+.++++|+
T Consensus 282 ~~-----~~~v~pS~aNFvlv~~~~---~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~ 349 (356)
T COG0079 282 LG-----LFGVFPSQANFVLVRVPD---AE-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALR 349 (356)
T ss_pred CC-----CCeecCCCCcEEEEECCC---cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHH
Confidence 53 111344558888887764 23 6689999999999999763 4699998 346777799999999
Q ss_pred HHHh
Q 021893 275 DVLE 278 (306)
Q Consensus 275 ~~l~ 278 (306)
+++.
T Consensus 350 ~~~~ 353 (356)
T COG0079 350 EVLK 353 (356)
T ss_pred HHHh
Confidence 8876
No 191
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.84 E-value=8.7e-20 Score=164.00 Aligned_cols=251 Identities=15% Similarity=0.120 Sum_probs=160.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC-------CHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG-------DITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-------d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++-...+..+.. . ..-...|.|+. ++.++.+ | +++++.+. ++++++
T Consensus 72 ~~i~it~Ga~~~l~~~~~~~~~-~-~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~---~~~~~v 145 (354)
T PRK06358 72 ENVILGNGATELIFNIVKVTKP-K-KVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK---EEIDLV 145 (354)
T ss_pred hhEEECCCHHHHHHHHHHHhCC-C-cEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc---cCCCEE
Confidence 3577777777776555544422 1 11122233322 2233321 3 34444443 357777
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccCCCCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWEEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++.++|++|.. .+.+.+++|.++|++|++++|+||+|.+|...+...+ .+.......+.||||.++ +|+ |+|
T Consensus 146 ~~~~P~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RiG 223 (354)
T PRK06358 146 FLCNPNNPTGQL-ISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGL-RLG 223 (354)
T ss_pred EEeCCCCCCCCc-cCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcch-hhe
Confidence 666668999864 6899999999999999999999999998754442211 111112223459999999 999 999
Q ss_pred eeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 140 AVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 140 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
|++++ +.+++.+..... .++.+.+++.++..+++.-.- ++..+.++++++.+.+.|++. ++. ...+..|.+
T Consensus 224 ~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~-~~~~~~g~f 296 (354)
T PRK06358 224 YGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF----KGI-KVYKPSVNF 296 (354)
T ss_pred eeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC----CCc-EEcCCcceE
Confidence 99874 677777654322 456677777777777742110 223344455555555555442 222 222345668
Q ss_pred EEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 218 NAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+|+.+++ ..++++.|.++||.+.++ +++++|++ ..+.++.+++++.|++.+
T Consensus 297 ~~~~~~~------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 297 IFFKLEK------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred EEEEcCc------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 8887763 368999999999999985 24689998 457888999999998765
No 192
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.84 E-value=3.2e-20 Score=166.46 Aligned_cols=209 Identities=21% Similarity=0.214 Sum_probs=144.3
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d 123 (306)
.|++.+++.+. +++++|+++.++|++|...+ .+.++++++.|+ +++++|+||+|.++...+..... ...+....
T Consensus 130 ~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~ 204 (346)
T TIGR01141 130 LDLEDILVAID---DKPKLVFLCSPNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIV 204 (346)
T ss_pred CCHHHHHHhcC---CCCCEEEEeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEE
Confidence 47889988765 57888998889999997765 444455554444 59999999999976433222111 11111112
Q ss_pred EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Q 021893 124 MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 124 ~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+.|+||.++ +|+ |+||+++++++++.++... ..+..+++++.++.++++... ..+..++++++.+.+++.|++.
T Consensus 205 ~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 280 (346)
T TIGR01141 205 LRTLSKAFGLAGL-RIGYAIANAEIIDALNKVR--APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL- 280 (346)
T ss_pred EehhhHhhhchhh-hceeeecCHHHHHHHHhcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 338899996 799 9999999999988887532 245567778777777665542 1334566666666676666654
Q ss_pred hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
++.. ..+..|.++|+.++. ++.++++.|.++||.+.++. .+++|++++ ++++++++++.|+
T Consensus 281 ---~g~~-~~~~~g~~~~~~~~~-----~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 281 ---PGLE-VYPSDANFVLIRFPR-----DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred ---CCCE-ECCCcCCEEEEecCC-----CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 1122 233467788887762 56789999999999999863 589999953 7899999988763
No 193
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-19 Score=163.52 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=145.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~ 124 (306)
|++++++.+.. ++++++++++++|++|.+. +.+.++++.+.|+ +++++|+||+|.+|........ .+.......+
T Consensus 140 d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~ 215 (364)
T PRK04781 140 DVPAIVAAALA--SNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVL 215 (364)
T ss_pred CHHHHHHHHhc--cCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEE
Confidence 46666554432 4688888888999999765 6777788877775 4899999999998743222111 1222222334
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHH
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~ 200 (306)
-||||.++ +|+ |+||+++++++++.+.... ..+..+.+++.++..+++.... .+..+.+++.++.+.+.|+.+
T Consensus 216 ~SfSK~~gl~Gl-RvGy~v~~~~l~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 292 (364)
T PRK04781 216 RTLSKAHALAAA-RIGSLIANAELIAVLRRCQ--APYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL 292 (364)
T ss_pred ecChhhcccccc-eeeeeeCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 49999999 999 9999999999998887643 3456677777777766653210 112334455555555556543
Q ss_pred HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
++.....+..|+++|+.++ +..++.+.|.++||.+.++. ++++|++. .+.++.+.+++.|++
T Consensus 293 ----~~~~~~~p~~g~f~~~~~~------~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~---~~~~~~~~l~~al~~ 359 (364)
T PRK04781 293 ----PGVRRVYPSQGNFLLVRFD------DAEAAFQALLAAGVVVRDQRAAPRLSDALRITL---GTPEQNDRVLAALQR 359 (364)
T ss_pred ----CCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeC---CCHHHHHHHHHHHHH
Confidence 2222234567899998775 24678899999999998752 57999984 367889999999887
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+..
T Consensus 360 ~~~ 362 (364)
T PRK04781 360 TQA 362 (364)
T ss_pred HHh
Confidence 654
No 194
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.84 E-value=2.5e-19 Score=164.04 Aligned_cols=211 Identities=16% Similarity=0.166 Sum_probs=151.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++ +++++|++++++|++|.+.+ +++|.++|+++|+++++|++|+ ++.. .+.... ..+|++
T Consensus 153 d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~--~~~D~~ 220 (406)
T PRK09295 153 QLETLPALFD---ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDVQA--LDCDFY 220 (406)
T ss_pred CHHHHHHhcC---CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCchh--cCCCEE
Confidence 7899998887 57899999999999999998 9999999999999999999997 2211 222233 345655
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCCcc----------------------CCCCCCHHHHHHHHHHHHHHhh--
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG----------------------STFGGNPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~aa~~al~~~~~-- 179 (306)
+++|.+| .. ++|++++++++++.+.+...+ ...+.+..+..++.++++.+.+
T Consensus 221 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g 298 (406)
T PRK09295 221 VFSGHKLYG-PT-GIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALG 298 (406)
T ss_pred EeehhhccC-CC-CcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhC
Confidence 5569554 44 679999999887766432110 1114567788888899988876
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--------
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------- 249 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------- 249 (306)
+.+.++.+++.+++++.|.++. +..... .....++.+.++. ....++.+.|.++||.++.+.
T Consensus 299 ~~~i~~~~~~l~~~l~~~l~~~~----~~~~~~~~~~~~iv~~~~~~----~~~~~~~~~L~~~gI~v~~g~~c~~~~~~ 370 (406)
T PRK09295 299 LNNIAEYEQNLMHYALSQLESVP----DLTLYGPQNRLGVIAFNLGK----HHAYDVGSFLDNYGIAVRTGHHCAMPLMA 370 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCCCceEEEEEECC----cCHHHHHHHHHhCCeEEeccccchHHHHH
Confidence 3355677777777777776542 121111 1224456665552 356678888989999987531
Q ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 250 ----DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 ----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++.+|++++.++|++||+.+++.|+++..
T Consensus 371 ~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 371 YYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999988754
No 195
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.84 E-value=2.9e-19 Score=163.20 Aligned_cols=244 Identities=18% Similarity=0.153 Sum_probs=159.8
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccC
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIP 78 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~ 78 (306)
..|++..++|+.+..+....+... + ..+..+++ .|++++++.+. +++++|++++++ ++|.+.
T Consensus 109 d~Vl~~~~~h~~~~~~~~~~~~~~---g-----~~~~~v~~~~~~~~d~~~l~~~i~---~~t~~viv~~~~-~~G~~~- 175 (398)
T cd00613 109 NKVLVPDSAHPTNPAVARTRGEPL---G-----IEVVEVPSDEGGTVDLEALKEEVS---EEVAALMVQYPN-TLGVFE- 175 (398)
T ss_pred CEEEEcCccCcchHHHHHHhcccC---C-----cEEEEeccCCCCCcCHHHHHHhcC---CCeEEEEEECCC-CCceec-
Confidence 455677889998877766554211 0 01112222 37899998886 579999999875 677663
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--Eeccccc----CCcccceeeEeCHHHHhhcC
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG----GGVIPVSAVLADKEVMLCIQ 152 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~----~G~~~~g~~~~~~~~~~~~~ 152 (306)
++|++|.++|++||+++|+|++|+... + ......+ .+|++ +++|.+. ||+ ++|+++.++++++.+.
T Consensus 176 --~~l~~i~~la~~~g~~livD~~~~~~~--~-~~~~~~~--~~d~~~~s~~K~~~p~g~Ggp-~~g~l~~~~~~~~~~~ 247 (398)
T cd00613 176 --DLIKEIADIAHSAGALVYVDGDNLNLT--G-LKPPGEY--GADIVVGNLQKTGVPHGGGGP-GAGFFAVKKELVRFLP 247 (398)
T ss_pred --chHHHHHHHHHhcCCEEEEEecccccc--C-CCChHHc--CCCEEEeeccccCCCCCCCCC-ceeEEEEhhhhHhhCC
Confidence 457999999999999999999986321 1 1111223 35554 6778873 477 9999999988887653
Q ss_pred CC-----------------------------CccCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHH
Q 021893 153 PG-----------------------------EHGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 153 ~~-----------------------------~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~ 200 (306)
+. ....++..++....++..+++.+.++ ++.++.++++++++++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 327 (398)
T cd00613 248 GRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEV 327 (398)
T ss_pred CCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 00112334455666666666665443 35678888999999988886
Q ss_pred HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
.... .........+++.++.. .+.++.++++.|.++|+.+... ..+.+|++|+.++|++||+++++.|
T Consensus 328 ~~~~----~~~~~~~~~v~~~~~~~-~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 328 GGVL----PFNGPFFHEFVLRLPPL-YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCcc----cCCCCeeEEEEEEcCCc-chHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 4221 00011122234444421 0235778999999999988653 5689999999999999999998864
No 196
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.84 E-value=6.3e-20 Score=169.90 Aligned_cols=268 Identities=12% Similarity=0.174 Sum_probs=159.5
Q ss_pred eEEEEecCCCCcccchhc-----ccCCccccccCCCCCCC-----------c--cccc-----------C-CCHHHHHHH
Q 021893 4 IIVSCCGCFHGRTLAAIS-----MSCDNEAIRGFGPLLPG-----------H--LKVD-----------F-GDITALEKI 53 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~-----------~--~~~~-----------~-~d~~~le~~ 53 (306)
.|++.+|+.+|-..++.+ +..+.+......|.++. . +.++ + .|+++++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 688999999887665544 34433333333344322 1 1111 1 256788876
Q ss_pred HHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccC-CCCCcEEEeccc
Q 021893 54 FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWE-EVRPDMVILGKA 130 (306)
Q Consensus 54 i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~-~~~~d~~s~sK~ 130 (306)
++ +++++++++.++|++|.+ .+++.+++|.++|++| ++++|+||+|..|......+ .... .....+.||||.
T Consensus 237 ~~---~~~kai~l~nP~NPTG~v-ls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl-~~~~~~~vI~v~SfSK~ 311 (521)
T TIGR03801 237 RD---PSIKALFVVNPSNPPSVA-MSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSL-FAELPYNTIGVYSFSKY 311 (521)
T ss_pred cC---CCCcEEEEeCCCCCCCCC-CCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccch-hhhCCCCEEEEEcchhh
Confidence 65 578888888888999954 5899999999999987 99999999999764311111 1111 112234499999
Q ss_pred cc-CCcccceeeEeCHH-----HHh--------hcC------------------------CCCccCCCCCCHHHHH--HH
Q 021893 131 LG-GGVIPVSAVLADKE-----VML--------CIQ------------------------PGEHGSTFGGNPLASA--VA 170 (306)
Q Consensus 131 ~~-~G~~~~g~~~~~~~-----~~~--------~~~------------------------~~~~~~~~~~~~~~~~--aa 170 (306)
++ +|| |+||++++++ ++. .+. .....++.+.+.+.+. ++
T Consensus 312 fg~~G~-RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al 390 (521)
T TIGR03801 312 FGATGW-RLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMAL 390 (521)
T ss_pred ccCchh-hhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHH
Confidence 98 999 9999999754 221 121 1112233333444443 21
Q ss_pred HHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCC-------------hhhHHHHH
Q 021893 171 IASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTAL-------------PVSAYDIC 235 (306)
Q Consensus 171 ~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~-------------~~~~~~~~ 235 (306)
-++...+.. +.+.+ +..+.++++...+...++ ......+..+.++++++..... ..+..+|+
T Consensus 391 ~a~~all~~~~~y~~---~~~~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~ 467 (521)
T TIGR03801 391 FSLFALMDKENAYKA---ETKDICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVL 467 (521)
T ss_pred HHHHHHhccchhHHH---HHHHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHH
Confidence 122222222 22222 222333333333222221 1112345677888888874210 01356788
Q ss_pred HHHHHC-CceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 236 LKMKER-GILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 236 ~~l~~~-Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.+|.++ ||.+.|+ ..+++|+++ ...+++++.++.++|+++++ ++.
T Consensus 468 ~~L~~e~gV~v~PG~~Fg~~~~~vRisl-a~l~~~~~~~~~~rl~~~~~-~~~ 518 (521)
T TIGR03801 468 FRLAEETGIVLLPGGGFGGPEWSVRVSL-ANLNEYDYAEIGRAIRKILD-EYY 518 (521)
T ss_pred HHHHHhCCEEEeCchhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHHHHH-HHH
Confidence 888755 9999986 246899994 23688999999999999998 764
No 197
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.84 E-value=2.3e-19 Score=160.96 Aligned_cols=222 Identities=23% Similarity=0.278 Sum_probs=154.6
Q ss_pred ccccCCCHHHHHHHHHhcC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-ccccccc-c
Q 021893 40 LKVDFGDITALEKIFKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRML-A 114 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~--~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~-~ 114 (306)
..++..|++.+++++++.. +++++++++++++++|...+ +++|.++|+++|+++|+|++|+ |. +..+... .
T Consensus 110 ~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~ 185 (349)
T cd06454 110 RIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEE 185 (349)
T ss_pred EEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCChhh
Confidence 3455668899999998642 56789999999999998877 9999999999999999999997 32 2222211 0
Q ss_pred cccCCCCCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHH
Q 021893 115 SDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHL 189 (306)
Q Consensus 115 ~~~~~~~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~ 189 (306)
........|+ .|++|.+++ +.|+++.++++++.+...... .+.+.++..++++.++++.+.. +...++++++
T Consensus 186 ~~~~~~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 262 (349)
T cd06454 186 FGGLTDDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQEN 262 (349)
T ss_pred hccccccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 1111223344 488999973 336688888888776543221 2224567777788888887755 4567788888
Q ss_pred HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCC
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSIS 262 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t 262 (306)
.+.+.+.|++.... ......+.+.++.+++ .....++.+.|.++||.+.+. +.+++|++++..++
T Consensus 263 ~~~l~~~l~~~g~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~ 334 (349)
T cd06454 263 VRYLRRGLKELGFP-----VGGSPSHIIPPLIGDD---PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHT 334 (349)
T ss_pred HHHHHHHHHhcCCc-----ccCCCCCcEEEEeCCC---hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCC
Confidence 88888888775211 1111223333333321 245678999999999998752 24689999998899
Q ss_pred HHHHHHHHHHHHHH
Q 021893 263 SNELQEGSKALHDV 276 (306)
Q Consensus 263 ~~~i~~~~~~l~~~ 276 (306)
++++++++++|+++
T Consensus 335 ~~~i~~~~~~l~~~ 348 (349)
T cd06454 335 KEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999764
No 198
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.84 E-value=9.7e-20 Score=164.25 Aligned_cols=207 Identities=18% Similarity=0.262 Sum_probs=142.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~ 124 (306)
|++++++.++ +++++++++.++|++|.+.+ .+++.++|+++|+++|+||+|.++. .+.... ....+....+
T Consensus 147 ~~~~l~~~~~---~~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 147 DVDSVLNAIT---EKTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIG 218 (361)
T ss_pred CHHHHHHHhc---cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEE
Confidence 6888888886 46778888888999999888 8889999999999999999998763 111111 1112222234
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ 203 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 203 (306)
.||||.++ +|+ |+||+++++++++.+.... ..+..+.+++.++..+++. .++.++..+..+..++.+.+...
T Consensus 219 ~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~- 291 (361)
T PRK00950 219 RTFSKVFGLAGL-RIGYGFVPEWLIDYYMRAK--TPFSLTRLSQAAAIAALSD---KEYIEKSIEHGIKSREYLYNELP- 291 (361)
T ss_pred EeehHhhcCchh-hcchhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhhcC-
Confidence 59999998 899 9999999999988776532 2344567777776666642 22333333333333333322211
Q ss_pred CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+ ...+..+.++|+.+. ..+..++++.|.++||.+.++ +++++|++++ +.++++.+++.|++++
T Consensus 292 ~----~~~~~~~~~i~~~~~----~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 292 F----KVYPSEANFVLVDVT----PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred e----eECCCcceEEEEECC----CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 1 112345677888773 346789999999999999874 2568999943 7789999999998876
Q ss_pred h
Q 021893 278 E 278 (306)
Q Consensus 278 ~ 278 (306)
+
T Consensus 361 ~ 361 (361)
T PRK00950 361 E 361 (361)
T ss_pred C
Confidence 3
No 199
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.84 E-value=1.5e-19 Score=165.02 Aligned_cols=258 Identities=15% Similarity=0.111 Sum_probs=162.0
Q ss_pred EEEEecCCCCcccchhcc--cCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 5 IVSCCGCFHGRTLAAISM--SCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 5 ii~~~~~~hg~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
|++..|+-+|-..++..+ ..+.+..-...|.|++ ++.+|. .|++.+++.+++++++++++
T Consensus 97 v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~ 176 (396)
T PRK09257 97 TVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVL 176 (396)
T ss_pred EEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEE
Confidence 488888888877665333 2333333344456554 233332 27899999988654556777
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cc-ccc---ccc-CCCCCcEEEeccccc-CCccc
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GR-MLA---SDW-EEVRPDMVILGKALG-GGVIP 137 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~-~~~---~~~-~~~~~d~~s~sK~~~-~G~~~ 137 (306)
+++.++|+||. +.+++.+++|.++|++||+++|+||+|.++... +. ..+ +.. ......+.||||.++ +|+ |
T Consensus 177 i~~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-R 254 (396)
T PRK09257 177 LHGCCHNPTGA-DLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE-R 254 (396)
T ss_pred EeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc-c
Confidence 77889999995 568999999999999999999999999987542 11 111 111 112234559999999 599 9
Q ss_pred ceeeEe---CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHHHHHHHHh
Q 021893 138 VSAVLA---DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR------D--EKLAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 138 ~g~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~------~--~~~~~~~~~~~~~l~~~L~~~~~ 202 (306)
+||+++ +++ ++..++........+.+.+.+.++...++... . ++..++++++++.+.+.|++...
T Consensus 255 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~ 334 (396)
T PRK09257 255 VGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGP 334 (396)
T ss_pred ceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999873 333 33444332222333345666666555553211 0 22455556666666666665421
Q ss_pred hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.. .+....+..|+++|+.++. +.+.+.+.++||.+.|.+ |++.+ ..++++|++++++|++++
T Consensus 335 ~~-~~~~~~p~gg~~~w~~l~~-------~~~~~l~~~~~V~~~p~~----ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 335 SR-DFDFIARQRGMFSYSGLTP-------EQVDRLREEFGVYAVGSG----RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred CC-CcccccccceEEEecCCCH-------HHHHHHHHcCCEEEcCCC----eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 10 1223456678888886641 233444456699998752 88853 378999999999998753
No 200
>PLN02397 aspartate transaminase
Probab=99.83 E-value=2.4e-19 Score=164.69 Aligned_cols=217 Identities=17% Similarity=0.132 Sum_probs=145.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--c-cc---cccCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--M-LA---SDWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~-~~---~~~~~ 119 (306)
|++.+++.++++.+++++++++.++|+||.+ .+++.+++|.++|++||+++|+||+|.+|.+.+. . .+ +...+
T Consensus 180 d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v-~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 258 (423)
T PLN02397 180 DFDGLLEDLKAAPDGSFVLLHACAHNPTGVD-PTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDG 258 (423)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcC
Confidence 7888888887654567888888899999955 5899999999999999999999999998754331 1 11 11111
Q ss_pred -CCCcEEEeccccc-CCcccceeeE--e-CHHHHh----hcCCCCccCCCCCCHHHHHHHHHHHHHHh--------hccH
Q 021893 120 -VRPDMVILGKALG-GGVIPVSAVL--A-DKEVML----CIQPGEHGSTFGGNPLASAVAIASLDVIR--------DEKL 182 (306)
Q Consensus 120 -~~~d~~s~sK~~~-~G~~~~g~~~--~-~~~~~~----~~~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~ 182 (306)
....+.||||.++ +|+ |+||++ . ++++++ .+.........+.+.+.+.++..+++.-. -++.
T Consensus 259 ~~vI~~~SfSK~~~~~G~-RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~ 337 (423)
T PLN02397 259 HEILVAQSYAKNMGLYGE-RVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGM 337 (423)
T ss_pred CcEEEEEECcccCCCccc-cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1223449999999 899 999984 3 555443 33222222233445666666665554311 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCCCCC
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSI 261 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~~~~ 261 (306)
.++++++++.+.+.|++++... .+....+..|.++|+.++ .++++.|+++ ||++.+. + |+++. ..
T Consensus 338 ~~~~~~rr~~l~~~L~~~~~~~-~~~~~~p~gg~fl~~~l~--------~~~~~~Ll~~~~V~v~~~--~--Ri~~~-~~ 403 (423)
T PLN02397 338 ADRIISMRQKLYDALEARGSPG-DWSHITKQIGMFSFTGLN--------KEQVDRMTKEYHIYMTRD--G--RISMA-GL 403 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-CCCcccCCceEEEecCCC--------HHHHHHHHHhCCEEECCC--C--eEEEe-eC
Confidence 5567777777777777763111 122234677788887653 3488888755 9999754 2 88842 37
Q ss_pred CHHHHHHHHHHHHHHHh
Q 021893 262 SSNELQEGSKALHDVLE 278 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~ 278 (306)
+++++++++++|+++++
T Consensus 404 ~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 404 SSKNVPYLADAIHAVVT 420 (423)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 89999999999999875
No 201
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=8.5e-20 Score=164.31 Aligned_cols=250 Identities=17% Similarity=0.140 Sum_probs=160.8
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
.|++.+|+.++-......+..+....-...|.++. ++.+|. .|++++++.++. .++++++++
T Consensus 83 ~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~--~~~~~v~l~ 160 (356)
T PRK04870 83 DVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE--HRPALVFLA 160 (356)
T ss_pred cEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCCEEEEc
Confidence 56777777666554444443332222222233322 122222 378999999874 367888888
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCHH
Q 021893 68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKE 146 (306)
Q Consensus 68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~ 146 (306)
+++|++|... +.+.+++|.++| ++++|+||+|.+|............+....+.|+|| ++ +|+ |+||++++++
T Consensus 161 ~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~Gl-RiG~~i~~~~ 234 (356)
T PRK04870 161 YPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGL-RLGYLAGHPA 234 (356)
T ss_pred CCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHH-hhhhhhCCHH
Confidence 8899999665 677778887777 789999999987643211111122222233459999 66 799 9999999999
Q ss_pred HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC
Q 021893 147 VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 225 (306)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~ 225 (306)
+++.+.... ..+..+.+++.++..+++.... ++..++++++++.+.+.|+.+ +++ ...+..|.++|+.++
T Consensus 235 ~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~~~~~~-- 305 (356)
T PRK04870 235 WIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL----PGV-TVFPSAANFILVRVP-- 305 (356)
T ss_pred HHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCc-EECCCCCeEEEEECC--
Confidence 998886533 2345667777777666653211 223455556666666666543 222 223456778888765
Q ss_pred CChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 226 ALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 226 ~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+..++++.|.++||.+.++ .++++|+++. +.++++.++++|++++
T Consensus 306 ----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 306 ----DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred ----CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 2467889999999999864 2579999943 6888999999988753
No 202
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=2.4e-19 Score=160.09 Aligned_cols=202 Identities=18% Similarity=0.157 Sum_probs=141.2
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccce
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++++++.++|+||.. .+.+.++++.+.|++++.++|+||+|.+|.............-...+-||||.++ +|+ |+|
T Consensus 131 ~~~v~l~nPnNPTG~~-~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~Gl-RiG 208 (339)
T PRK06959 131 LTHLIVVNPNNPTAER-LPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGV-RAG 208 (339)
T ss_pred CCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcch-heE
Confidence 4455555557889865 5788899999999999999999999997743211111111111122349999999 999 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
|+++++++++.+.... ..+..+.+++.++.++++... .++..+++++.++++.+.|++.+ . .+...++++
T Consensus 209 y~v~~~~li~~l~~~~--~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~--~~~~~~~f~ 279 (339)
T PRK06959 209 FVLAAPALLAALRDAL--GAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG-----F--AVHATPLFS 279 (339)
T ss_pred EEecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-----C--CccCcceEE
Confidence 9999999998887643 345567788888887775321 13345666666777777776652 1 112346677
Q ss_pred EEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 219 AVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
|+.++ +..++.+.|.++||.++.. ..+++|++ +..+.++++.+++.|+++++ -+.
T Consensus 280 ~~~~~------~~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~~al~~~~~-~~~ 335 (339)
T PRK06959 280 WTDDP------RAAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLEDALAECVP-TLA 335 (339)
T ss_pred EEeCC------CHHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHHHHHHHHHH-HHh
Confidence 77543 3567999999999999875 35699999 43577899999999998877 543
No 203
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.83 E-value=1.6e-19 Score=165.00 Aligned_cols=207 Identities=14% Similarity=0.089 Sum_probs=137.5
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccCC---CCCcEEEeccccc-
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEE---VRPDMVILGKALG- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~~---~~~d~~s~sK~~~- 132 (306)
+++++++++.++|++|. +.+.+.+++|.++|++||+++|+||+|.+|...+. ..+. ...+ ....+.||||.++
T Consensus 172 ~~~~~i~l~nP~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 250 (402)
T TIGR03542 172 PKIDIIYLCSPNNPTGT-VLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGF 250 (402)
T ss_pred CCceEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCC
Confidence 46788888889999996 56899999999999999999999999998754332 1111 1111 2233459999998
Q ss_pred CCcccceeeEeCHHHH--------hhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHH
Q 021893 133 GGVIPVSAVLADKEVM--------LCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+|+ |+||++++++++ +...........+.+.+.+.++...++.-.. .+..+.++++++.+.+.|+..
T Consensus 251 pGl-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 251 TGV-RLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred CCc-ceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 999 999999998876 2211101111223566776666555532110 112344455555555555553
Q ss_pred hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
+.....+..|.++|+.++. ..++.++++.|++ +||.+.|+ +.+++|++ +..++++++.++++|+
T Consensus 329 ----~~~~~~~~~~~f~~v~l~~---~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~~~l~~l~ 399 (402)
T TIGR03542 329 ----GFKVYGGEHAPYLWVKTPE---GISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIVEACERIK 399 (402)
T ss_pred ----CceecCCCceeEEEEECCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHHHHHHHHH
Confidence 1211222357788998874 3456788998884 69999985 25799999 4558899999999998
Q ss_pred HHH
Q 021893 275 DVL 277 (306)
Q Consensus 275 ~~l 277 (306)
+++
T Consensus 400 ~~~ 402 (402)
T TIGR03542 400 EAL 402 (402)
T ss_pred hhC
Confidence 753
No 204
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.83 E-value=3.6e-19 Score=163.92 Aligned_cols=215 Identities=14% Similarity=0.210 Sum_probs=154.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.+++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++++|++|. ++. ..+... ...+|++
T Consensus 162 ~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~--~~~~~~--~~~~d~~ 229 (424)
T PLN02855 162 DVEQLKELLS---EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPH--MPVDVQ--TLGADFL 229 (424)
T ss_pred CHHHHHHHhc---cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCC--cCCCch--hcCCCEE
Confidence 7899999887 57999999999999999998 9999999999999999999996 211 122223 3345655
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCCcc---------------------CCCCCCHHHHHHHHHHHHHHhh---
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG---------------------STFGGNPLASAVAIASLDVIRD--- 179 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~aa~~al~~~~~--- 179 (306)
+++| +.|.. ++|++++++++++.+.+...+ ...+.+..+.+++.++++.+.+
T Consensus 230 ~~s~~K-~~gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~ 307 (424)
T PLN02855 230 VASSHK-MCGPT-GIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGM 307 (424)
T ss_pred Eeeccc-ccCCC-ccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCH
Confidence 6779 44444 689999999988777543110 0112455566677788887755
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceee------EEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCC---
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKE------VRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTH--- 249 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~--- 249 (306)
+++.++..++.+++++.|+++. +.... ....+.++.+.++. ....++.+.|.++ ||.++.+.
T Consensus 308 ~~i~~~~~~l~~~l~~~L~~~~----g~~i~~~~~~~~~~r~~~v~~~~~~----~~~~~v~~~L~~~~gI~v~~g~~c~ 379 (424)
T PLN02855 308 DRIHEYEVELGTYLYEKLSSVP----GVRIYGPKPSEGVGRAALCAFNVEG----IHPTDLSTFLDQQHGVAIRSGHHCA 379 (424)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCcccccCcccEEEEEECC----cCHHHHHHHhcccCCEEEechhhhh
Confidence 3456777777788877776641 11111 11234566676653 4567899999888 99988532
Q ss_pred ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 ---------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 ---------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+++|++++.++|++|++.+++.|++++. .+..
T Consensus 380 ~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~-~~~~ 421 (424)
T PLN02855 380 QPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIA-FFSS 421 (424)
T ss_pred HHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 46899999999999999999999999988 6543
No 205
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=1.4e-19 Score=162.76 Aligned_cols=252 Identities=15% Similarity=0.170 Sum_probs=158.9
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v 66 (306)
..|++..|+.++-...+.++..+.+..-...|.++. +..++. .|++++++ .++++++
T Consensus 78 ~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-------~~~~v~~ 150 (353)
T PRK05387 78 EQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-------PNGGIIF 150 (353)
T ss_pred HHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-------cCCEEEE
Confidence 357888888888666655554433222112232211 122332 25666542 2456677
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCH
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADK 145 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~ 145 (306)
+.++|++|.+.+ .+.+++|.+.+ +++++|+||+|.+|+.....-..+.......+.|+||.++ +|+ |+||+++++
T Consensus 151 ~~P~NPtG~~~~-~~~~~~l~~~~--~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~ 226 (353)
T PRK05387 151 PNPNAPTGIALP-LAEIERILAAN--PDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHP 226 (353)
T ss_pred eCCCCCCCCCCC-HHHHHHHHHhC--CCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhh-hceeeecCH
Confidence 777999997765 55555555443 2999999999987642211100122222223448999999 999 999999999
Q ss_pred HHHhhcCCCCcc-CCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 146 EVMLCIQPGEHG-STFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
++++.+...... ..++.+.+++.++..+++... .++..++++++++.+.+.|++.+ .. ..+..+.++|+.++
T Consensus 227 ~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~-~~~~~~~~~~~~~~ 300 (353)
T PRK05387 227 ELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-----FE-VLPSKANFVFARHP 300 (353)
T ss_pred HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-----Ce-ECCCcCcEEEEECC
Confidence 988887654332 345667788877777774311 12345566666666666666542 22 22345667777655
Q ss_pred cCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 224 KTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
. .+..++++.|.++||.+.+. ..+++|+++. +.++++.++++|+++++
T Consensus 301 ~----~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 301 S----HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred C----CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 2 45778999999999998653 2578999953 67999999999998875
No 206
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.83 E-value=3.4e-19 Score=159.00 Aligned_cols=251 Identities=12% Similarity=0.059 Sum_probs=164.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccc---cCCCCCC---------CcccccCCCHHHHHHHHHhcCCcEEEEEEcccc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIR---GFGPLLP---------GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQ 70 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~ 70 (306)
..|++++|+|++......++.++....- ...|.++ +...+.++|++.+++ . +++++|++++ .
T Consensus 72 e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~~~l~~l~~----~-~~~~lIiitg-~ 145 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESDELSELKK----I-DGTSLVVITG-S 145 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEeccCCHHHHhh----C-cCceEEEEEC-C
Confidence 5799999999998888777776433221 1112221 123344567666432 2 3577888876 4
Q ss_pred CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+++|.+. +.+.|++|.++|++||+++++||+|+.+ +..|... ...++.+.-+.|+||++ +|+ ++||++++++++
T Consensus 146 s~~G~v~-~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~-~~~~~~divv~s~SKal-aG~-r~G~v~~~~~li 221 (346)
T TIGR03576 146 TMDLKVV-SEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPP-ALDLGADLVVTSTDKLM-DGP-RGGLLAGRKELV 221 (346)
T ss_pred CCCCccc-CHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCC-HHHcCCcEEEeccchhc-ccc-ceEEEEeCHHHH
Confidence 7788764 5777999999999999999999999842 1122211 12223233345899965 466 899999999999
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 228 (306)
+.+........++.+++.++++.++++....+...+.++++.+.+++.++.+ . . . +..+.++++.++.
T Consensus 222 ~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~--~---~--~-~~~~~f~~~~~~~---- 289 (346)
T TIGR03576 222 DKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL--N---V--E-RTPTGFVIKGVEE---- 289 (346)
T ss_pred HHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC--C---C--C-cCCCeEEEEeCCC----
Confidence 9888765555556688888888999976544445666767777666666632 1 1 1 2233366666642
Q ss_pred hhH-HHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHH---HHHHHHHHHHHHH
Q 021893 229 VSA-YDICLKMKERGILAKPT-----HDTIVRLTPPLSISSN---ELQEGSKALHDVL 277 (306)
Q Consensus 229 ~~~-~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~---~i~~~~~~l~~~l 277 (306)
.+. +...+.|.++||.+.|+ .++++||+ +..+++ +++.+++.|++.+
T Consensus 290 ~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 290 EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHHHHhcc
Confidence 123 33445556779999985 26799999 444444 7999999887654
No 207
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.83 E-value=2.1e-18 Score=149.08 Aligned_cols=268 Identities=17% Similarity=0.210 Sum_probs=181.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc----------ccccCC---------CHHHHHHHHHh---cCCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH----------LKVDFG---------DITALEKIFKE---SGDQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~---------d~~~le~~i~~---~~~~ 60 (306)
++||+..|+.-..-+.+.-+..+....-.=.|+|+|+ .++|.. +.++||+++++ .+-+
T Consensus 147 ~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~k 226 (471)
T KOG0256|consen 147 ERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLK 226 (471)
T ss_pred cceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCc
Confidence 5688888888776666666666655544444888873 233321 58999988885 2357
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cCCCCCc----EEEecccc
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WEEVRPD----MVILGKAL 131 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~~~~~d----~~s~sK~~ 131 (306)
++.+++.+++|+-|.+. ++|.|..+.+.+.++++.+|+||+|++-......| ++ + ....++| +.++||-+
T Consensus 227 VkGvlitNPsNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~ 305 (471)
T KOG0256|consen 227 VKGVLITNPSNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDF 305 (471)
T ss_pred eeEEEEeCCCCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecccc
Confidence 89999999999998765 79999999999999999999999998732333222 11 1 1112344 34999999
Q ss_pred c-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Q 021893 132 G-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPN 206 (306)
Q Consensus 132 ~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~ 206 (306)
| +|+ |+|.+.. ++++....++....+..+....-+.+.+-+=+++.+ .+..++++...+++.+.|++++
T Consensus 306 GlpGf-RvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg----- 379 (471)
T KOG0256|consen 306 GLPGF-RVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG----- 379 (471)
T ss_pred CCCce-EEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC-----
Confidence 9 999 9999987 577777777644444333322222222211122211 2235566666666777777774
Q ss_pred ceeeEEEeeeEEEEEEecC--CChhh-HHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 207 YVKEVRGRGLFNAVEFDKT--ALPVS-AYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 207 ~~~~~~~~g~~~~i~~~~~--~~~~~-~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
......+.|+++|+++... ....+ ..++.+.++++ ++-++|+ -+||+|++. ....++.++-+++||+..
T Consensus 380 I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcF-An~~~~t~~~am~Ri~~~ 458 (471)
T KOG0256|consen 380 IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCF-ANMSEETLEVAMRRLKQF 458 (471)
T ss_pred CceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEe-ccCCHHHHHHHHHHHHHH
Confidence 5557789999999997642 11222 34678888888 9999997 379999994 344555666699999988
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
+.
T Consensus 459 ~~ 460 (471)
T KOG0256|consen 459 LD 460 (471)
T ss_pred HH
Confidence 87
No 208
>PRK09105 putative aminotransferase; Provisional
Probab=99.83 E-value=1.8e-19 Score=162.82 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=156.5
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
.|++..|+-++-...+..+..+.+..-...|.|+. ++.++. .|++++++. . +++++++++
T Consensus 97 ~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~---~~~~~v~l~ 172 (370)
T PRK09105 97 HVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D---PNAGLIYIC 172 (370)
T ss_pred hEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C---CCCCEEEEe
Confidence 46666666666555555554432222222233332 122222 356777654 2 457788888
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc---EEEeccccc-CCcccceeeEe
Q 021893 68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAVLA 143 (306)
Q Consensus 68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~g~~~~ 143 (306)
+++|++|.+ .+.+.++++.+.|+ +++++|+||+|.+|+...... +......+ +.||||.+| +|+ |+||+++
T Consensus 173 nP~NPTG~~-~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~s~~--~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~ 247 (370)
T PRK09105 173 NPNNPTGTV-TPRADIEWLLANKP-AGSVLLVDEAYIHFSDAPSVV--DLVAQRKDLIVLRTFSKLYGMAGM-RLGLAAA 247 (370)
T ss_pred CCCCCCCcC-cCHHHHHHHHHhCC-CCcEEEEECchHHhccCcchH--HHHhhCCCEEEEecccHhhcCCcc-ceeeeec
Confidence 889999976 57888888888754 599999999998764321111 11112233 338999998 899 9999999
Q ss_pred CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
++++++.+... ..+..+.+++.++.++++... .++..++++++++.+.+.|++.. +. ..+..|.++++.+
T Consensus 248 ~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~-~~~~~~~f~~~~~ 318 (370)
T PRK09105 248 RPDLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG-----YK-CTPSQANCFMVDV 318 (370)
T ss_pred CHHHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CC-cCCCCCcEEEEeC
Confidence 99999887653 234456667777776664311 12234555666666666666542 21 1233455555544
Q ss_pred ecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 223 DKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+ .+..++++.|.++||.++.. .++++|+++. ++++++.+++.|+++++
T Consensus 319 ~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 319 K-----RPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred C-----CCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 3 24678999999999998522 3689999943 67889999998887654
No 209
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.83 E-value=8.5e-19 Score=157.81 Aligned_cols=218 Identities=17% Similarity=0.166 Sum_probs=154.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++.+++.+++ .++++++++++++++|.+.+ +++|.++|+++|+++++|++|+ +|. ..+....++.+..+
T Consensus 111 ~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~--~~~~~~~~~~d~~~ 181 (356)
T cd06451 111 VSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGG--EPFRMDEWGVDVAY 181 (356)
T ss_pred CCHHHHHHHHhc--cCCCEEEEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccC--ccccccccCccEEE
Confidence 478999999974 26889988888899999888 9999999999999999999986 221 12223333333333
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCC--CCc-----------------cCCCCCCHHHHHHHHHHHHHHhh---ccH
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQP--GEH-----------------GSTFGGNPLASAVAIASLDVIRD---EKL 182 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~aa~~al~~~~~---~~~ 182 (306)
.+.+|.++++. ++|+++.++++++.+.. ... ....+.+...+.++.++++.+.. +.+
T Consensus 182 ~s~~K~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~ 260 (356)
T cd06451 182 TGSQKALGAPP-GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENR 260 (356)
T ss_pred ecCchhccCCC-CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHH
Confidence 46679999877 88999999998877652 110 11123345556666777777654 345
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEe
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLT 256 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~ 256 (306)
.++.+++.+++++.|+..... ....... .+.+.++.+++ ..+..++++.|.++ ||.+.++ .++++|++
T Consensus 261 ~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis 334 (356)
T cd06451 261 WARHRRLAKALREGLEALGLK---LLAKPELRSPTVTAVLVPE---GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIG 334 (356)
T ss_pred HHHHHHHHHHHHHHHHHcCCe---eccCcccCCCceEEEECCC---CCCHHHHHHHHHHhCCEEEecccccccCCEEEEe
Confidence 677778888888888876322 1111111 23344554442 34577899999999 9999864 35689999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh
Q 021893 257 PPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 257 ~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++..++++|+++++++|+++++
T Consensus 335 ~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 335 HMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred cCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999998763
No 210
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.83 E-value=1.2e-18 Score=159.01 Aligned_cols=222 Identities=18% Similarity=0.163 Sum_probs=162.7
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHH--HHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL--CSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l--~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
|++++++.++++. +++++|+++++.+++|.+.+ +++|.++ |+++|+++|+|++|+ ++ ...+..+.++.+.
T Consensus 122 ~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~g~~~vvD~v~s-~g--~~~id~~~~~~D~ 194 (401)
T PLN02409 122 DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGVRKLLDCAQHPALLLVDGVSS-IG--ALDFRMDEWGVDV 194 (401)
T ss_pred CHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHHHHHHhhhccCcEEEEEcccc-cC--CccccccccCccE
Confidence 6999999998632 36899999999999999988 8999999 999999999999997 21 1223233344333
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCCc---------------cC---CCCCCHHHHHHHHHHHHHHhh---cc
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH---------------GS---TFGGNPLASAVAIASLDVIRD---EK 181 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~aa~~al~~~~~---~~ 181 (306)
-+.+.+|+++++. ++|+++.++++++.+.+... .+ .++.+...+.++.++++.+.+ ++
T Consensus 195 ~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~ 273 (401)
T PLN02409 195 ALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLEN 273 (401)
T ss_pred EEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHH
Confidence 3346679999877 89999999998887654210 11 335566677788888888765 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceee--EEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC----CCCEEE
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT----HDTIVR 254 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lR 254 (306)
+.++.+++.+++++.|++++.. .... ....+.+.++.+++ +.+..++.+.|. +.|+.+..+ .++.||
T Consensus 274 i~~~~~~l~~~l~~~L~~~g~~---~~~~~~~~~s~~v~~~~~p~---~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~R 347 (401)
T PLN02409 274 VIARHARLGEATRLAVEAWGLK---LCTKKPEWRSDTVTAVVVPE---GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFR 347 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCCe---eccCChhhcccceEEEeCCC---CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEE
Confidence 6788888888998888876322 1111 11133455665553 456678888876 559998865 357899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 255 LTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++++..++.+|+..++++|++++. ++.
T Consensus 348 ig~~g~~~~~~~~~~~~~~~~~l~-~~g 374 (401)
T PLN02409 348 IGHLGNVNELQLLGALAGVEMVLK-DVG 374 (401)
T ss_pred EcCCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 999999999999999999999999 765
No 211
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.82 E-value=1.9e-18 Score=156.20 Aligned_cols=223 Identities=12% Similarity=0.107 Sum_probs=156.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++++++.++++ ++++++.+.++++++|.+.+ +++|.++|+++|+++|+|++|+ ++. ..+....++.+.-+
T Consensus 117 ~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~~livDa~~~-~g~--~~~~~~~~~~d~~v 188 (368)
T PRK13479 117 PDAAEVEAALAAD-PRITHVALVHCETTTGILNP----LDEIAAVAKRHGKRLIVDAMSS-FGA--IPIDIAELGIDALI 188 (368)
T ss_pred CCHHHHHHHHHhC-CCCcEEEEEcccCccccccC----HHHHHHHHHHcCCEEEEEcccc-cCC--ccccccccCceEEE
Confidence 4799999999864 45778888889999999988 9999999999999999997774 432 22333333333334
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCC-----------------ccCCCCCCHHHHHHHHHHHHHHhh----ccHH
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------HGSTFGGNPLASAVAIASLDVIRD----EKLA 183 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~aa~~al~~~~~----~~~~ 183 (306)
.+++|++.|.. ++||+++++++++.+.... ....++.+...+.++.++++.+.+ ++..
T Consensus 189 ~s~~K~l~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~ 267 (368)
T PRK13479 189 SSANKCIEGVP-GFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARG 267 (368)
T ss_pred ecCccccccCC-CceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 47779998776 7899999999887765431 111235566677777788877644 2345
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCC
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPL 259 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~ 259 (306)
+++.++++++++.|++++... .... ........+.++.. ...+..++.+.|.++||.+.++. .+++|++...
T Consensus 268 ~~~~~~~~~l~~~L~~~g~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~ 343 (368)
T PRK13479 268 ARYANNQRTLVAGMRALGFEP---LLDAEIQSPIIVTFHAPAD-PAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIG 343 (368)
T ss_pred HHHHHHHHHHHHHHHHcCCcc---cCCchhcCceEEEEECCCC-CCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCC
Confidence 677778888888887763221 1110 11222334433321 12356789999999999998753 3589999767
Q ss_pred CCCHHHHHHHHHHHHHHHhhhc
Q 021893 260 SISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 260 ~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.++++|++.++++|++++. ++
T Consensus 344 ~~t~edi~~~l~~L~~~l~-~~ 364 (368)
T PRK13479 344 DVDAADIRRLVAAIAEALY-WM 364 (368)
T ss_pred CCCHHHHHHHHHHHHHHHH-Hc
Confidence 7899999999999999988 65
No 212
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=2.6e-19 Score=162.00 Aligned_cols=253 Identities=21% Similarity=0.197 Sum_probs=161.7
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
.|++.+|+.++-...+.++..+.+..-...|.++. +..++. .|++++++.++. ++++++++
T Consensus 90 ~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~---~~~~v~l~ 166 (371)
T PRK05166 90 RIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR---APRMLMFS 166 (371)
T ss_pred HEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc---CCCEEEEe
Confidence 57777777777655544443332222222233322 222322 268999988873 56788888
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccC-CC---CCcEEEeccccc-CCcccceee
Q 021893 68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWE-EV---RPDMVILGKALG-GGVIPVSAV 141 (306)
Q Consensus 68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~-~~---~~d~~s~sK~~~-~G~~~~g~~ 141 (306)
.++|++|.+. +.+.+++|.++|++ ++++|+||+|.++...+...+ .... .. ...+.||||.++ +|+ |+||+
T Consensus 167 ~p~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~Gl-RiG~~ 243 (371)
T PRK05166 167 NPSNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGL-RVGYG 243 (371)
T ss_pred CCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchh-heeee
Confidence 8899999654 68888888888864 899999999997753221111 1111 11 123448999999 999 99997
Q ss_pred Ee-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 142 LA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 142 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
++ ++++++.+.... ..+..+.+++.++.+++..-. -++..+.++++++.+.+.|+... .. ..+..|.++|
T Consensus 244 i~~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~-~~p~~g~fl~ 315 (371)
T PRK05166 244 LVSDPELVGLLDRVR--TPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-----YR-IAPSRANFLF 315 (371)
T ss_pred ecCCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-----Ce-eCCCcCCEEE
Confidence 75 678877765432 245567777777776664211 12234455555566666666541 22 2345678888
Q ss_pred EEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 220 VEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.++. +..++++.|.++||.+.|+ ..+++|++.. +.++.+.+.+.|++++.
T Consensus 316 ~~~~~-----~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 316 FDARR-----PASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVLE 370 (371)
T ss_pred EeCCC-----CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 87542 4678999999999999875 2679999943 56777888888776653
No 213
>PLN02672 methionine S-methyltransferase
Probab=99.82 E-value=4.9e-19 Score=173.98 Aligned_cols=263 Identities=11% Similarity=0.062 Sum_probs=161.8
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~ 65 (306)
.|++..|+.++-.....++..+.+..-...|.|+. ++.+|. .|++.|++++++. .+..+++
T Consensus 756 ~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-~~~~I~L 834 (1082)
T PLN02672 756 EFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-KKPWVYI 834 (1082)
T ss_pred EEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-CCCEEEE
Confidence 56666666555544445555443332222333332 222332 2678899998642 1245666
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc---ccc----cC-CC-----CCcEEEeccccc
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML---ASD----WE-EV-----RPDMVILGKALG 132 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~---~~~----~~-~~-----~~d~~s~sK~~~ 132 (306)
++|++|+||. +++++.+++|.++|++||++||+||+|+++.+.+... ++. .. .. ...+.||||.++
T Consensus 835 ~nPnhNPTG~-v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGL-LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCc-cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 7776699995 5689999999999999999999999999765544321 010 11 10 112338999998
Q ss_pred -CCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h-------ccHHHHHHHHHHHHHHHHHHHH
Q 021893 133 -GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D-------EKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 133 -~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~-------~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+|+ |+||++++ +++++.+........ .+...+.++.+++.... . .+..+.++++++++.+.|++.
T Consensus 914 lpGL-RIGylIap~~eLi~~l~~~~~~s~--~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~- 989 (1082)
T PLN02672 914 SGGH-EFGFLALNDSVLIDAFHSAPGLSR--PHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC- 989 (1082)
T ss_pred cHHH-HheeEEeCCHHHHHHHHHhhhhcC--CCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 899 99999986 458887764321111 12223333333332221 1 123444566666666666654
Q ss_pred hhCCCceeeEEEeeeEEEEEEecC-------C-------ChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCC
Q 021893 202 QQFPNYVKEVRGRGLFNAVEFDKT-------A-------LPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSIS 262 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~~~i~~~~~-------~-------~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t 262 (306)
++....+..|.++|+.+... + ...++.++++.|+++ ||.+.|+ .++++|++ +..+
T Consensus 990 ----Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIs--fa~~ 1063 (1082)
T PLN02672 990 ----GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFS--FALE 1063 (1082)
T ss_pred ----CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEE--ecCC
Confidence 23334456677777764310 0 013567899999976 9999985 35899999 5568
Q ss_pred HHHHHHHHHHHHHHHh
Q 021893 263 SNELQEGSKALHDVLE 278 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~ 278 (306)
++++++++++|+++.+
T Consensus 1064 ~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1064 DSEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8899999999998765
No 214
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.82 E-value=9.9e-19 Score=153.27 Aligned_cols=257 Identities=18% Similarity=0.221 Sum_probs=181.2
Q ss_pred ceEEEEecCCCCcccchhcc--cCCcc--ccccC----------------CCCCCCcccccCC-----CHHHHHHHHHhc
Q 021893 3 AIIVSCCGCFHGRTLAAISM--SCDNE--AIRGF----------------GPLLPGHLKVDFG-----DITALEKIFKES 57 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~--~~~~~--~~~~~----------------~~~~~~~~~~~~~-----d~~~le~~i~~~ 57 (306)
.+|++++|++.+...+..++ ..... ..+.. +-...++.+.|.+ |+++|+++|+
T Consensus 62 ~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-- 139 (386)
T COG1104 62 EEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-- 139 (386)
T ss_pred CeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC--
Confidence 58999999999998887763 22110 00000 0001224444443 7999999999
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCc
Q 021893 58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGV 135 (306)
Q Consensus 58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~ 135 (306)
++|.+|.|.++||.+|.++| +++|.++|+++|+++++|.+|+ .|+. +.+...+..|++||| |-.| .-
T Consensus 140 -~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa----~Gki-pi~~~~~~vD~ls~SaHK~~G-pk 208 (386)
T COG1104 140 -PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA----VGKI-PIDLEELGVDLLSFSAHKFGG-PK 208 (386)
T ss_pred -CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh----cCce-eccccccCcceEEeehhhccC-CC
Confidence 67999999999999999999 9999999999999999999998 3331 244444568999998 5444 33
Q ss_pred ccceeeEeCHHHHhhcCCCCccCCC-------CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCC
Q 021893 136 IPVSAVLADKEVMLCIQPGEHGSTF-------GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPN 206 (306)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~ 206 (306)
++|+++.++.+ .+.+..+++.. +.|..+.++...|++...+ +....++.++++++.+.|.+..+.
T Consensus 209 -GiGaLyv~~~~--~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~--- 282 (386)
T COG1104 209 -GIGALYVRPGV--RLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPD--- 282 (386)
T ss_pred -ceEEEEECCCC--ccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---
Confidence 67888876664 33333222222 4577777777777777655 334667777788888877765322
Q ss_pred cee--e-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------------------CCCEEEEeCCCC
Q 021893 207 YVK--E-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----------------------HDTIVRLTPPLS 260 (306)
Q Consensus 207 ~~~--~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------------------~~~~lRi~~~~~ 260 (306)
... . .......+.+.++ +...+.+.-.|..+||+++.+ ..+.|||+++..
T Consensus 283 ~~~~g~~~~rlP~~~~~~f~----gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~ 358 (386)
T COG1104 283 VYLNGDDEPRLPNILNFSFP----GVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRF 358 (386)
T ss_pred EEEcCCcccCCCCeEEEEeC----CCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCC
Confidence 111 1 2234455566666 467888888888889999853 137899999999
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCC
Q 021893 261 ISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+|++|++.+++.|.++++ .+++
T Consensus 359 tt~eei~~~~~~l~~~i~-~lr~ 380 (386)
T COG1104 359 TTEEEIDAAAEALKEIIK-RLRE 380 (386)
T ss_pred CCHHHHHHHHHHHHHHHH-HHhh
Confidence 999999999999999999 7655
No 215
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.82 E-value=2.1e-18 Score=157.84 Aligned_cols=217 Identities=18% Similarity=0.211 Sum_probs=152.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~ 124 (306)
|++.+++.++...+++++|+++++++++|.+.+ +++|.++|+++|+++++|++|+ .|. .+....++++..+
T Consensus 157 ~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~----~G~~~id~~~~gvD~~~ 228 (406)
T TIGR01814 157 RLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA----VGNVPLDLHDWGVDFAC 228 (406)
T ss_pred CHHHHHHHHHhcCCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc----cCCcccccccCCCCEEE
Confidence 688999988765578999999999999999999 9999999999999999999998 222 2333444444444
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCCcc-----------------------CCCCCCHHHHHHHHHHHHHHhh--
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHG-----------------------STFGGNPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~aa~~al~~~~~-- 179 (306)
.+..|+++||. + |.++..++....+.+...+ ...+.+..++.++.++++.+.+
T Consensus 229 ~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g 306 (406)
T TIGR01814 229 WCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAG 306 (406)
T ss_pred EcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcC
Confidence 45669998777 6 5555544433333331100 0123466677778889988865
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCc-eee---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEE
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNY-VKE---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVR 254 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lR 254 (306)
+...++.+++.+++++.|++.....++. +.. ....+.++.+.++ ....++.+.|.++||.+....++.+|
T Consensus 307 ~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-----~~~~~~~~~L~~~gi~v~~~~~~~iR 381 (406)
T TIGR01814 307 MEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-----VPGKAVFQALIKRGVIGDKREPSVIR 381 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-----CCHHHHHHHHHHCCEEEeccCCCeEE
Confidence 4467788888888888887652100001 111 1123445566554 24568999999999998876668999
Q ss_pred EeC-CCCCCHHHHHHHHHHHHHHH
Q 021893 255 LTP-PLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 255 i~~-~~~~t~~~i~~~~~~l~~~l 277 (306)
+++ +.++|++||+.++++|++++
T Consensus 382 iS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 382 VAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EechhccCCHHHHHHHHHHHHHHh
Confidence 999 68999999999999998765
No 216
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=1.5e-19 Score=162.24 Aligned_cols=206 Identities=16% Similarity=0.147 Sum_probs=140.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~ 124 (306)
|++++++++. ++++++++.++|+||... +.+.+++|.+.|++ +.++|+||+|.+|........ ....+....+
T Consensus 135 d~~~l~~~~~----~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~ 208 (351)
T PRK01688 135 DLPAIADNLD----GVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVIL 208 (351)
T ss_pred CHHHHHHhcc----CCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEE
Confidence 6788887763 578888889999999765 78888888888876 688999999988742221111 1222222223
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHH
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~ 200 (306)
-||||.+| +|+ |+||+++++++++.+.+.. ..+..+.+++.++.++++.... .+..+.+.+.++++.+.|+.+
T Consensus 209 rSfSK~~glaGl-RiGy~i~~~~~i~~l~~~~--~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 285 (351)
T PRK01688 209 RTLSKAFALAGL-RCGFTLANEEVINLLLKVI--APYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI 285 (351)
T ss_pred ecchHhhcCHHH-HHhHHhCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 49999999 899 9999999999988887532 3455666767676666652111 122344444555565666543
Q ss_pred HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
++.....+..++++++.+. ++.++.+.|+++||.++++ .++++|+++. +.++++.++++|
T Consensus 286 ----~~~~~~~ps~~nfi~~~~~------~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 286 ----PCVEQVFDSETNYILARFT------ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred ----CCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 1121233456777777654 3578999999999999854 2579999944 689999998876
No 217
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.82 E-value=2.9e-18 Score=156.92 Aligned_cols=213 Identities=16% Similarity=0.162 Sum_probs=152.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.+++.++ +++++++++.+++++|.+.+ +++|.++|++||+++++|++|+. +. ..+....+ .+|++
T Consensus 148 ~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~-g~--~~~~~~~~--~~d~~ 215 (403)
T TIGR01979 148 DLDDLEKLLT---EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQAV-PH--MPVDVQAL--DCDFY 215 (403)
T ss_pred CHHHHHHHhc---cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhhc-Cc--cccCcccc--CCCEE
Confidence 6899998887 57899999999999999988 99999999999999999999972 11 11222323 45554
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCCccC---------------------CCCCCHHHHHHHHHHHHHHhh---
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFGGNPLASAVAIASLDVIRD--- 179 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~aa~~al~~~~~--- 179 (306)
+++|.+| .. ++|++++++++++.+.+...+. ..+.+...+.++.++++.+.+
T Consensus 216 ~~s~~K~~g-p~-G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~ 293 (403)
T TIGR01979 216 VFSGHKMYG-PT-GIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGL 293 (403)
T ss_pred EEecccccC-CC-CceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCH
Confidence 7779764 44 6788999988877765321110 113455667777788877755
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE----EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------ 249 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------ 249 (306)
+.+.++..++.+++++.|+++. +.....+ ..+.++.+.++. .+..++.+.|.++||.++++.
T Consensus 294 ~~~~~~~~~l~~~l~~~l~~~~----g~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~L~~~gI~v~~g~~~~~~~ 365 (403)
T TIGR01979 294 ENIEAHEHELTAYALERLGEIP----GLRIYGPRDAEDRGGIISFNVEG----VHPHDVGTILDEEGIAVRSGHHCAQPL 365 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCCccccCceEEEEeCC----cCHHHHHHHHhhCCEEEcchhhhhHHH
Confidence 3456777777777777776642 1211111 235666676653 346678899999999987532
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 250 ------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 250 ------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+++|++++.+++++|++++++.|+++++ .+
T Consensus 366 ~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~-~~ 402 (403)
T TIGR01979 366 MRRFGVPATCRASFYIYNTEEDIDALVEALKKVRK-FF 402 (403)
T ss_pred HHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHH-Hh
Confidence 57899999999999999999999998877 54
No 218
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=1.1e-18 Score=156.97 Aligned_cols=210 Identities=17% Similarity=0.181 Sum_probs=142.8
Q ss_pred HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccCCCCCcEEE
Q 021893 49 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEEVRPDMVI 126 (306)
Q Consensus 49 ~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~~~~~d~~s 126 (306)
++++.+. +++++++++.++|++|. ..+++.+++|.++|+++++++|+||+|.+|...+..+ + ....+....+.|
T Consensus 134 ~~~~~~~---~~~k~v~l~~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S 209 (356)
T PRK08056 134 AILEALT---PDLDCLFLCTPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRS 209 (356)
T ss_pred HHHHhcc---CCCCEEEEeCCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEe
Confidence 4444454 57888889889999997 5689999999999999999999999999875444211 1 122222233459
Q ss_pred eccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhh
Q 021893 127 LGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQ 203 (306)
Q Consensus 127 ~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~ 203 (306)
+||.++ +|+ |+||+++ ++++++.+... ...+..+.+++.++..+++.-. ..+..+.++++++.+.+.|+.+
T Consensus 210 ~SK~~~~~G~-RiG~~v~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~--- 283 (356)
T PRK08056 210 LTKFYAIPGL-RLGYLVNSDDAAVARMRRQ--QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL--- 283 (356)
T ss_pred chhhccCcch-hheeeecCCHHHHHHHHHh--CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 999999 999 9999998 46777777642 2345556666666666553110 1223444555555555555543
Q ss_pred CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
++.. ..+..|.++|+.++. +..++++.|+++||.+.++. .+++|++. .+.++.+.+++.|++++
T Consensus 284 -~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 284 -PLLT-VWPGRANYLFLRCER-----PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAI---RSAAENERLLAALRNVL 353 (356)
T ss_pred -CCcE-EcCCCCcEEEEEcCC-----ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE---cCHHHHHHHHHHHHHHH
Confidence 2222 224467788887753 24679999999999988752 36999994 36788899999988776
Q ss_pred h
Q 021893 278 E 278 (306)
Q Consensus 278 ~ 278 (306)
+
T Consensus 354 ~ 354 (356)
T PRK08056 354 T 354 (356)
T ss_pred c
Confidence 5
No 219
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.82 E-value=1.5e-18 Score=157.26 Aligned_cols=208 Identities=18% Similarity=0.233 Sum_probs=147.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++++++.+. +++++|++..+++++|.+.+ +++|.++|+++|++|++|++|+. +.. . .+.....+|++
T Consensus 128 d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~~-~~~--~--~~~~~~~~d~~ 195 (373)
T cd06453 128 DLEALEKLLT---ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQSA-GHM--P--VDVQDLGCDFL 195 (373)
T ss_pred CHHHHHHHhc---CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhhc-Cce--e--eeccccCCCEE
Confidence 7899999987 47899999999999998888 99999999999999999999972 111 1 22223456888
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc---------------------CCCCCCHHHHHHHHHHHHHHhhcc-
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG---------------------STFGGNPLASAVAIASLDVIRDEK- 181 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~aa~~al~~~~~~~- 181 (306)
++| |.+++ . ++|++++++++++.+.+.... ...+.+..++.+..++++.+...+
T Consensus 196 ~~s~~K~~~~-~-g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~ 273 (373)
T cd06453 196 AFSGHKMLGP-T-GIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGM 273 (373)
T ss_pred EeccccccCC-C-CcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCH
Confidence 777 99987 6 889999999988877653211 011345556666777788776543
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------
Q 021893 182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------- 248 (306)
Q Consensus 182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------- 248 (306)
..++.+++.+++++.|++... + .........+.++++.++. .+..++.+.|.++||.++++
T Consensus 274 ~~~~~~~~~~~~~l~~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~ 347 (373)
T cd06453 274 EAIAAHEHELTAYALERLSEIPG-V-RVYGDAEDRAGVVSFNLEG----IHPHDVATILDQYGIAVRAGHHCAQPLMRRL 347 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-e-EEeCCccccCCeEEEEECC----cCHHHHHHHHHHCCEEeccCccchhHHHHHh
Confidence 345555566666666655311 0 0111112245667776652 45678999999999998753
Q ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 249 -HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 249 -~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
..+++|++++..+|++|++++++.|
T Consensus 348 ~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 348 GVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 2578999999999999999998864
No 220
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.81 E-value=9.6e-18 Score=146.12 Aligned_cols=273 Identities=16% Similarity=0.138 Sum_probs=184.9
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCC---------CCccccc--CC----CHHHHHHHHHhcC------CcEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL---------PGHLKVD--FG----DITALEKIFKESG------DQIA 62 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~----d~~~le~~i~~~~------~~~~ 62 (306)
.|++-+|+.||...+...+.+..+..-..+.-+ .|+.++| .+ ++|.|++.+..+. ++..
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~ 205 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPH 205 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCe
Confidence 678888999998777666665433221111111 2233333 32 7999999999864 3467
Q ss_pred EEEEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-----------------------ccccccccC
Q 021893 63 GFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-----------------------GRMLASDWE 118 (306)
Q Consensus 63 ~v~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-----------------------g~~~~~~~~ 118 (306)
++++-| .+|+||.. .+.|.-++|.++|++||+++|.||.|--+... ..+.+.+..
T Consensus 206 vlYTIPTgqNPTG~t-ls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtd 284 (472)
T KOG0634|consen 206 VLYTIPTGQNPTGNT-LSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTD 284 (472)
T ss_pred EEEeCcCCCCCCCCc-cCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCccccccc
Confidence 777777 58888865 58999999999999999999999999522111 111222334
Q ss_pred CCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF 198 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~ 198 (306)
|.+..+-||||-+++|. |+||+.+++.+++.........+-.++.+.+...-+.++.+..+++.+.+++++.....+-+
T Consensus 285 GrVIr~dSFSKiiaPGl-RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn 363 (472)
T KOG0634|consen 285 GRVIRNDSFSKIIAPGL-RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRN 363 (472)
T ss_pred ccEEeccchhhhhcCcc-eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445569999999999 99999999988888766555566666777777777777777776555555554444433322
Q ss_pred H----HHhhCCCc--eeeEEEeeeEEEEEEe-------cCCChhhHHHHHHHHHHCCceeccC----------CCC-EEE
Q 021893 199 K----IQQQFPNY--VKEVRGRGLFNAVEFD-------KTALPVSAYDICLKMKERGILAKPT----------HDT-IVR 254 (306)
Q Consensus 199 ~----~~~~~~~~--~~~~~~~g~~~~i~~~-------~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~-~lR 254 (306)
. +....|.. ..-++..|+++|+.++ +. .++..+.+...+.++||.+.++ ... ++|
T Consensus 364 ~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~-i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffR 442 (472)
T KOG0634|consen 364 ALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKS-INQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFR 442 (472)
T ss_pred HHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccc-hHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEE
Confidence 2 22333322 3456679999999996 21 1223445667778889988764 133 899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 255 LTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 255 i~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++.++. +.++++++++||..+++ +.
T Consensus 443 ls~a~a-~~e~l~~g~~rf~~~ik-e~ 467 (472)
T KOG0634|consen 443 LSIAFA-EPEKLDEGIERFGSVIK-EH 467 (472)
T ss_pred EEeecC-CHHHHHHHHHHHHHHHH-HH
Confidence 997644 67799999999999988 63
No 221
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.81 E-value=5.6e-18 Score=154.71 Aligned_cols=205 Identities=14% Similarity=0.142 Sum_probs=140.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.+++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++++|++|.. + ...+.... ..+|++
T Consensus 145 ~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~-~--~~~~~~~~--~~~d~~ 212 (397)
T TIGR01976 145 HPDDLASLLS---PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHYA-P--HGLIDVQA--TGADFL 212 (397)
T ss_pred CHHHHHHhcC---CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhhc-c--ccCCCHHH--cCCCEE
Confidence 6899999887 57899999999999999988 99999999999999999999961 1 11222222 345544
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCCccCC----------CCCCHHHHHHHHHHHHHHhhcc------------
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST----------FGGNPLASAVAIASLDVIRDEK------------ 181 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~aa~~al~~~~~~~------------ 181 (306)
|++|.+ |. ++|++++++++++.+.+...... .+.+...+++..++++.+.+.+
T Consensus 213 ~~s~~K~~--g~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~ 289 (397)
T TIGR01976 213 TCSAYKFF--GP-HMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLV 289 (397)
T ss_pred EEechhhc--CC-ceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhh
Confidence 777987 45 78999999998887765321111 1334455666667777664321
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHhhCCCcee-e---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----
Q 021893 182 -----LAERSAHLGEELRQHLFKIQQQFPNYVK-E---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---- 248 (306)
Q Consensus 182 -----~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---- 248 (306)
..++..++.+++++.|+++. +... . ....+.++.+.+. +.+..++.+.|.++||.++.+
T Consensus 290 ~~~~~~~~~~~~l~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~~~ 361 (397)
T TIGR01976 290 ASFQAIDAYENRLAEYLLVGLSDLP----GVTLYGVARLAARVPTVSFTVH----GLPPQRVVRRLADQGIDAWAGHFYA 361 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCCccCCCceEEEEeC----CcCHHHHHHHHHHCCeEEEeCccch
Confidence 23444555566666555532 1111 1 1123445555544 245678999999999999854
Q ss_pred -----------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 249 -----------HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 249 -----------~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
..+++|++++.++|++|++.+++.|
T Consensus 362 ~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 362 VRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 2468999999999999999999864
No 222
>PRK08354 putative aminotransferase; Provisional
Probab=99.81 E-value=2.7e-18 Score=151.65 Aligned_cols=238 Identities=16% Similarity=0.100 Sum_probs=146.4
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE 72 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~ 72 (306)
.|++.+|+.++-...+.... +....-...|.++. +..+ ..|++.+++.++ ++++++++.++|+
T Consensus 56 ~I~vt~G~~~al~~~~~~~~-~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~----~~~~vi~~~P~NP 129 (311)
T PRK08354 56 PIVITAGITEALYLIGILAL-RDRKVIIPRHTYGEYERVARFFAARIIKG-PNDPEKLEELVE----RNSVVFFCNPNNP 129 (311)
T ss_pred CEEECCCHHHHHHHHHHhhC-CCCeEEEeCCCcHHHHHHHHHcCCEEeec-CCCHHHHHHhhc----CCCEEEEecCCCC
Confidence 57778888877544433222 22222222344433 1112 247889988876 2334555555788
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhc
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCI 151 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~ 151 (306)
+|. +.+.+.+++|.++|+++|+++|+||+|.+|...+... + .+....+-||||.++ +|+ |+||+++. .+.+
T Consensus 130 TG~-~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~--~-~~~vi~~~S~SK~~~l~Gl-RiG~~v~~---~~~l 201 (311)
T PRK08354 130 DGK-FYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP--E-GENIIKLRTFTKSYGLPGI-RVGYVKGF---EEAF 201 (311)
T ss_pred CCC-ccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccccc--C-CCcEEEEeccHhhcCCccc-eeeeeeeh---HHHH
Confidence 986 5689999999999999999999999999875443221 1 222334459999999 999 99999883 3334
Q ss_pred CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893 152 QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231 (306)
Q Consensus 152 ~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 231 (306)
+... ..+..+..++.++...++ +. .+++++..+.+++..+.+.... ..++.|.++++.+. +.
T Consensus 202 ~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l-----~~~~~~~~~~~~~~------~~ 263 (311)
T PRK08354 202 RSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKAL-----YVKSDANFFIKDVG------DA 263 (311)
T ss_pred HHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhc-----CCCCCCcEEEEECC------CH
Confidence 3322 233344455444444333 11 2444455555555555543222 12344555555443 35
Q ss_pred HHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 232 YDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 232 ~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.++++.|.++||.+.|+. ++++|++. ...++.+++++.|+++
T Consensus 264 ~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 264 EKFVEFLKRNGILVRDCTSFGLPGYIRFSV---RDREENEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHCCeEEEecccCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 679999999999999863 48999983 3556677777777654
No 223
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=4.5e-18 Score=141.19 Aligned_cols=259 Identities=18% Similarity=0.238 Sum_probs=176.6
Q ss_pred eEEEEecCCCCcccchhcccCCccc----cccCCCCCCCc---ccccCCCHHHHHHHHHh-cCCcEEEEEEccccCCCCc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEA----IRGFGPLLPGH---LKVDFGDITALEKIFKE-SGDQIAGFLFEPIQGEAGV 75 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~d~~~le~~i~~-~~~~~~~v~v~~~~~~~G~ 75 (306)
..|.+-.+|.+...+.-++..+... ..+.+.+.+|+ ....|-|+..+|..+.+ .+-+.++|....++++.|+
T Consensus 129 D~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLckry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGd 208 (417)
T KOG1359|consen 129 DTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGD 208 (417)
T ss_pred ceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhccchhHHHHHHHHHhhhheEEEEEecceeccCCC
Confidence 3445555555543333333332211 23444555665 44556688888877764 3356899999999999999
Q ss_pred ccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCC--CCcEE--EecccccCCcccceeeEeCHHHHh
Q 021893 76 IIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVML 149 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~ 149 (306)
+.| |++|.+++++||.+|++||+|. | +|.+|.+. .+.+++ ++|++ +++|++||. --||..+++++++
T Consensus 209 iaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt-~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~ 281 (417)
T KOG1359|consen 209 IAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGT-AEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLIS 281 (417)
T ss_pred ccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCCh-HHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHH
Confidence 999 9999999999999999999997 5 46677655 355553 45554 899999832 1234899999888
Q ss_pred hcCCCCccCCCC--CCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC
Q 021893 150 CIQPGEHGSTFG--GNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226 (306)
Q Consensus 150 ~~~~~~~~~~~~--~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~ 226 (306)
-+++.....-|+ .++.....+.++++.+. +.....+.+++.+++++.++..+... ....-.++++.+.+
T Consensus 282 llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGftI------sg~~hPI~pv~lGd-- 353 (417)
T KOG1359|consen 282 LLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGFTI------SGASHPICPVMLGD-- 353 (417)
T ss_pred HHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCcee------cCCCCCccceeccc--
Confidence 776543333332 23333344455565554 34467788899999999988875321 11112334555554
Q ss_pred ChhhHHHHHHHHHHCCceec-------cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 227 LPVSAYDICLKMKERGILAK-------PTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 227 ~~~~~~~~~~~l~~~Gi~~~-------~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
...+..+++.|+++|+++. |.+.-.+|+.++..++++||+++++++.+..+
T Consensus 354 -a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 354 -ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred -HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence 4567889999999999876 33566899999999999999999999988776
No 224
>PLN02721 threonine aldolase
Probab=99.80 E-value=4.6e-18 Score=152.80 Aligned_cols=222 Identities=17% Similarity=0.185 Sum_probs=142.4
Q ss_pred CHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc-ccccccc--C
Q 021893 46 DITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RMLASDW--E 118 (306)
Q Consensus 46 d~~~le~~i~~~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g-~~~~~~~--~ 118 (306)
|++.+++.++++. +++++|++++++++.|..+.+.+.+++|.++|++||+++|+||+|. ++... ....... .
T Consensus 119 d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~ 197 (353)
T PLN02721 119 DLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVK 197 (353)
T ss_pred CHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhh
Confidence 7999999998531 4688999988766544466689999999999999999999999986 21110 0111111 1
Q ss_pred CCCCcEEEecccccCCccccee-eEeCHHHHhhcCCCCccCCCCCC--HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGGGVIPVSA-VLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~G~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+...-++++||++++ ++|+ ++.++++++.+...........+ ....+++..+++.... ..++..++.+++.+
T Consensus 198 ~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~ 272 (353)
T PLN02721 198 AADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVP--KLEDDHKKAKLLAE 272 (353)
T ss_pred hCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 222224588999873 3454 66788887765432211111111 1222233334433211 12333456667777
Q ss_pred HHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 196 HLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 196 ~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
.|+++. +... ..+..+.++++.++.. .......+++.|.++||.+.+...+++|++++..++++|+++++++|+
T Consensus 273 ~L~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~ 347 (353)
T PLN02721 273 GLNQIK----GLRVNVAAVETNIVYFDITDG-SRITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQ 347 (353)
T ss_pred HHHhCC----CcEEecCCccceEEEEEccCC-ccccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHH
Confidence 776642 1211 1123355677777631 013567899999999999999988999999988899999999999999
Q ss_pred HHHh
Q 021893 275 DVLE 278 (306)
Q Consensus 275 ~~l~ 278 (306)
+++.
T Consensus 348 ~~~~ 351 (353)
T PLN02721 348 QAAL 351 (353)
T ss_pred HHhh
Confidence 8875
No 225
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.80 E-value=2.7e-18 Score=154.77 Aligned_cols=253 Identities=18% Similarity=0.132 Sum_probs=152.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC-------CHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG-------DITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-------d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++-......+.. ....-...|.++. ++.+|.+ +..+++++.+.. ++++++
T Consensus 75 ~~I~it~G~~~~i~~~~~~l~~-g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 152 (360)
T PRK07392 75 EWILPGNGAAELLTWAGRELAQ-LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGL 152 (360)
T ss_pred hhEEECCCHHHHHHHHHHHhCC-CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEE
Confidence 3577778887776655544332 1222222344433 1222221 112344444332 357788
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccCCCCCcEEEeccccc-CCcccce
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWEEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++.++|+||.... .++|.++++++++ +|+||+|.+|.+.+...+ .+..+....+.||||.++ +|+ |+|
T Consensus 153 ~l~nP~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG 226 (360)
T PRK07392 153 LLNNPHNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGL-RLG 226 (360)
T ss_pred EEeCCCCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCch-hee
Confidence 88888999998776 5677778888986 666999998755443211 111112223449999999 999 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
|+++++++++.+.... ..++.+.+++.++.++++... .+...+.++++++.+.+.|+.+ +++. ..++.+.++
T Consensus 227 ~~v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~-~~~~~~~fl 299 (360)
T PRK07392 227 YAIAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASL----PGLT-PLPSAANFL 299 (360)
T ss_pred eeeCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC----CCcE-ECCCCCCEE
Confidence 9999999988876533 346678888888887775311 1112334445555555555432 2222 234567777
Q ss_pred EEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 219 AVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|+.++. ++.++++.++ ++||.+.|+ +++++|++. . +.++.+.+.+.|+++++
T Consensus 300 ~~~~~~-----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~--~-~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 300 LVQSQG-----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAV--R-TEAENQRLLEALAAILA 358 (360)
T ss_pred EEEcCC-----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEe--C-CHHHHHHHHHHHHHHhh
Confidence 876542 4667888765 579999876 247999993 3 34555666666665543
No 226
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.79 E-value=8.8e-18 Score=152.78 Aligned_cols=224 Identities=13% Similarity=0.085 Sum_probs=145.1
Q ss_pred CCHHHHHHHHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893 45 GDITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 120 (306)
Q Consensus 45 ~d~~~le~~i~~~----~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~ 120 (306)
.|++.+++.++++ .+++++|+++++++++|.+.+ +++|.++|++||+++++|++|+ +|. .++....++.
T Consensus 139 ~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~--~~~~~~~~g~ 211 (387)
T PRK09331 139 ITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGR--MPVDGKKLGA 211 (387)
T ss_pred cCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCC--cCCCHHHcCC
Confidence 4799999999853 246899999999999999888 9999999999999999999997 111 1222334454
Q ss_pred CCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccC--------CCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Q 021893 121 RPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--------TFGGNPLASAVAIASLDVIRD-EKLAERSAHLGE 191 (306)
Q Consensus 121 ~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~ 191 (306)
+..+.|++|+++++. ++|++++++++++.+....... ..+..+....++.++++.+.+ .+..++..++.+
T Consensus 212 D~~~~s~~K~l~~~~-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~ 290 (387)
T PRK09331 212 DFIVGSGHKSMAASA-PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKAR 290 (387)
T ss_pred CEEEeeCcccccCCC-CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445568889999877 9999999999888765431100 001122233444455554433 123444556677
Q ss_pred HHHHHHHHH-HhhCCCceeeEEEeeeEEEEEEecC-----CChhhHHHHHHHHHHCCceecc-CCCCEEEEeCCCCCCHH
Q 021893 192 ELRQHLFKI-QQQFPNYVKEVRGRGLFNAVEFDKT-----ALPVSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSN 264 (306)
Q Consensus 192 ~l~~~L~~~-~~~~~~~~~~~~~~g~~~~i~~~~~-----~~~~~~~~~~~~l~~~Gi~~~~-~~~~~lRi~~~~~~t~~ 264 (306)
++++.|+++ +.. ..........++.++.+.. .......++.+.|.++||...+ +.+..+|+.. ..++++
T Consensus 291 ~l~~~L~~l~g~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~ 366 (387)
T PRK09331 291 WFVDELEKIEGFK---QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLST-YGLTWE 366 (387)
T ss_pred HHHHHHhcCCCEE---EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEe-ccCCHH
Confidence 777777766 211 0100012233444443310 0112345799999999998544 4344566664 457999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 021893 265 ELQEGSKALHDVLELDL 281 (306)
Q Consensus 265 ~i~~~~~~l~~~l~~~~ 281 (306)
|++.+++.|+++++ ++
T Consensus 367 di~~l~~aL~~i~~-~~ 382 (387)
T PRK09331 367 QVEYVADAFKEIAE-KY 382 (387)
T ss_pred HHHHHHHHHHHHHH-hc
Confidence 99999999999887 53
No 227
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.79 E-value=1.4e-17 Score=151.27 Aligned_cols=215 Identities=19% Similarity=0.226 Sum_probs=148.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++++++.++ +++++++++.+++++|.+.+ +++|.++|+++|+++++|++|+ + |. ...+.....+|+
T Consensus 124 ~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~---g~-~~~~~~~~~~D~ 191 (379)
T TIGR03402 124 LDLEELRAAIT---DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-V---GK-IPIDLKEMNIDM 191 (379)
T ss_pred CCHHHHHHhcC---CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-c---cc-cccCcccCCCCE
Confidence 37899999987 57899999999999999988 9999999999999999999997 2 22 123333456788
Q ss_pred EEec--ccccCCcccceeeEeCHHHHhhcCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893 125 VILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL 193 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l 193 (306)
+++| | +.|.. ++|+++.+++.. +.+... ....+.+..+..+..++++.+.+ ++..++.+++.+++
T Consensus 192 ~~~s~~K-~~gp~-G~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l 267 (379)
T TIGR03402 192 LSLSGHK-LHGPK-GVGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRL 267 (379)
T ss_pred EEEcHHH-cCCCC-ceEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8777 9 65555 788888876642 232211 11224566777777788877654 23446666677777
Q ss_pred HHHHHHHHhhCCCceeeEEE--e-eeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---------------------
Q 021893 194 RQHLFKIQQQFPNYVKEVRG--R-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--------------------- 249 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~--~-g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------------------- 249 (306)
++.|.+. .++....... . ...+.+.+.. .+..++...|.++||.++.+.
T Consensus 268 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~ 340 (379)
T TIGR03402 268 EAGLLAR---IPDARLNGDPTKRLPNTVNISFEY----IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHT 340 (379)
T ss_pred HHHHHhh---CCCEEEeCCCccCCCCEEEEEecC----CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChh
Confidence 7766641 1212111111 1 1233333332 346788899989999988531
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 --DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+.+|++++.++|++||+++++.|+++++ .+.+
T Consensus 341 ~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~-~~~~ 375 (379)
T TIGR03402 341 AAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA-RLRA 375 (379)
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 36899999999999999999999999988 6543
No 228
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.8e-18 Score=154.32 Aligned_cols=193 Identities=14% Similarity=0.096 Sum_probs=131.5
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCccc
Q 021893 60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIP 137 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~ 137 (306)
++++++++.++|+||... +++.+++| + +++++||+||+|.+|.. ....+ .........+.||||.++ +|+ |
T Consensus 138 ~~~~i~i~nP~NPTG~~~-s~~~l~~l---~-~~~~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~Gl-R 210 (335)
T PRK14808 138 EGDVVFIPNPNNPTGHVF-EREEIERI---L-KTGAFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQ-R 210 (335)
T ss_pred CCCEEEEeCCCCCCCCCc-CHHHHHHH---H-hcCCEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCccc-c
Confidence 467888999999999766 55555555 4 58999999999998731 11111 122222333459999999 999 9
Q ss_pred ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
+||+++++++++.+.... ..++.+.+++.++..+++.... .+..+.+++.++.+.+.|++. +.. ..+..|.
T Consensus 211 vG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----g~~-~~~~~g~ 282 (335)
T PRK14808 211 IGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-----GYR-ITDSRGN 282 (335)
T ss_pred eEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCE-ECCCCCe
Confidence 999999999998886533 2455677788777777753221 222334444455555555543 121 2334678
Q ss_pred EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
++|+.++. .+..++.+.|.++||.+... .+++|+++ .+.++.+++++.|++
T Consensus 283 f~~~~l~~----~~~~~~~~~l~~~Gi~V~~~-~~~~Risi---~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 283 FVFIFMEK----EEKERLLEHLRAKNIAVRSF-REGVRITI---GKREENDMILKELEV 333 (335)
T ss_pred EEEEeCCC----ccHHHHHHHHHHCCeEEEEC-CCCeEEec---CCHHHHHHHHHHHHh
Confidence 88887763 34578999999999999976 57899983 467888888888864
No 229
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=2.6e-18 Score=154.50 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=153.1
Q ss_pred eEEEEecCCCCcccchhcccCCc-cccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v 66 (306)
.|++.+|+-++-...+.....+. +..-...|.++. +..+|. .|++.+++ + +++++|++
T Consensus 79 ~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~----~~~~li~i 153 (354)
T PRK04635 79 QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L----DGAKLVFI 153 (354)
T ss_pred HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c----cCCCEEEE
Confidence 46677777776665555554332 212222233332 122222 25666652 2 36889999
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCcEEEeccccc-CCcccceeeEeC
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLAD 144 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~ 144 (306)
+.++|++|.+. +.+.+++|.+.|+ +++||+||+|.+|......... ....-...+-||||.++ +|+ |+||++++
T Consensus 154 ~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~Gl-RlG~~i~~ 229 (354)
T PRK04635 154 CNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGA-RCGFTLAN 229 (354)
T ss_pred eCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHH-HHhhhhCC
Confidence 99999999776 5666666666654 5999999999877422111111 11111122449999998 999 99999999
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
+++++.+.... ..++.+.+.+.++.++++.... ++..+.+++.++.+.+.|++.. .. ...+..|.++++.
T Consensus 230 ~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~-~~~~~~g~f~~~~ 302 (354)
T PRK04635 230 EELIEILMRVI--APYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYG----GA-KVLEGNGNYVLAK 302 (354)
T ss_pred HHHHHHHHhhc--CCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCC----Cc-eECCCCCcEEEEE
Confidence 99998876422 2455566666666666643111 1123344555566666666541 11 1233456777776
Q ss_pred EecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 222 FDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 222 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
++ +..++.+.|.++||.+... .++++|++. .+.++++.++++|++.
T Consensus 303 ~~------~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 303 FD------DVDAVFKALWDAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRNQ 352 (354)
T ss_pred CC------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 64 2457888999999998754 257999993 4789999999988764
No 230
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=4.9e-17 Score=143.61 Aligned_cols=261 Identities=17% Similarity=0.173 Sum_probs=187.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.||+++.+|..|.-++=+.-........... ..-...|++++++.|+++ +.+++|.+.+...+||.+.|
T Consensus 80 gdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~------~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp--- 149 (383)
T COG0075 80 GDKVLVVVNGKFGERFAEIAERYGAEVVVLEV------EWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP--- 149 (383)
T ss_pred CCeEEEEeCChHHHHHHHHHHHhCCceEEEeC------CCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccCc---
Confidence 35777777777776544332222111111100 111234899999999965 56889999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCC------
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------ 155 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------ 155 (306)
+++|+++|++||.++|+|.+-+ ..|..+..+.|+++.-+.+..|++++.. ++|++..+++.++.+....
T Consensus 150 -l~~I~~~~k~~g~l~iVDaVsS---~Gg~~~~vd~wgiDv~itgSQK~l~~PP-Gla~v~~S~~a~e~~~~~~~~~~yl 224 (383)
T COG0075 150 -LKEIAKAAKEHGALLIVDAVSS---LGGEPLKVDEWGIDVAITGSQKALGAPP-GLAFVAVSERALEAIEERKHPSFYL 224 (383)
T ss_pred -HHHHHHHHHHcCCEEEEEeccc---CCCcccchhhcCccEEEecCchhccCCC-ccceeEECHHHHHHHhcCCCCceee
Confidence 9999999999999999999987 2345666777877655666779999776 7789999999888775431
Q ss_pred ------------ccCCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 156 ------------HGSTFGGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 156 ------------~~~~~~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
....++++...+.+..++++.+.+++ ..++.+.+.+.+++.+++++... +......+..+..+
T Consensus 225 DL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~--~~~~~~~s~tvta~ 302 (383)
T COG0075 225 DLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL--FADPERRSPTVTAI 302 (383)
T ss_pred cHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc--ccCcccCCCceEEE
Confidence 23334555667777779999988754 67888899999999999987553 22122334455666
Q ss_pred EEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 221 EFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
..+. +.+..++...++++ |+.+.++ .+..+||..+...+..++..++.+|..++. ++..
T Consensus 303 ~~P~---g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~-~~g~ 366 (383)
T COG0075 303 KVPE---GVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALR-ELGV 366 (383)
T ss_pred ECCC---CCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHH-HcCC
Confidence 6665 34444444466655 8888875 357999999999999999999999999999 7654
No 231
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.9e-17 Score=142.05 Aligned_cols=263 Identities=16% Similarity=0.215 Sum_probs=170.3
Q ss_pred ceEEEEecCCCCcccchhcccCCccc----cccCCCCCCC-----ccccc-C-----C----CHHHHHHHHHhcCCcEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEA----IRGFGPLLPG-----HLKVD-F-----G----DITALEKIFKESGDQIAG 63 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~-~-----~----d~~~le~~i~~~~~~~~~ 63 (306)
+.|+...|+-|+--++..+++.+... +.+| |+|.. -..++ | . |++.+|++++ ++|.+
T Consensus 127 ~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGf-p~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~A 202 (447)
T KOG0259|consen 127 DDVVLTSGCSQAIELAISSLANPGANILLPRPGF-PLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVA 202 (447)
T ss_pred CceEEeccchHHHHHHHHHhcCCCCceecCCCCC-chHHHhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeE
Confidence 56888999999988888888875433 2333 33322 11111 1 1 7999999998 57888
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-CCCCcEE--Eeccccc-CCcccc
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-EVRPDMV--ILGKALG-GGVIPV 138 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-~~~~d~~--s~sK~~~-~G~~~~ 138 (306)
++|.+++|+.|.+ .+.+=|++|.++|+++|+++|.||+|..+.+.+..| +...+ ...|.+. ++||++- +|| |+
T Consensus 203 ivviNP~NPcGnV-ys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGW-Rl 280 (447)
T KOG0259|consen 203 IVVINPNNPCGNV-YSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGW-RL 280 (447)
T ss_pred EEEeCCCCCCccc-ccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCc-ee
Confidence 8888888888865 589999999999999999999999999876666544 23332 3344433 7789876 999 99
Q ss_pred eeeEeCHH--HH------hhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 021893 139 SAVLADKE--VM------LCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNY 207 (306)
Q Consensus 139 g~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 207 (306)
||++.... ++ +.+....+ .+..++++-++|.-.-|+.-.+ +.-...++.+.+...++|+++. ..
T Consensus 281 GWi~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP----~l 355 (447)
T KOG0259|consen 281 GWIALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIP----CL 355 (447)
T ss_pred eeEEEecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCC----Cc
Confidence 99988542 22 12211111 1222344444444443333222 1234556666677777777652 22
Q ss_pred eeeEEE-eeeEEEEEEecC--CChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 208 VKEVRG-RGLFNAVEFDKT--ALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 208 ~~~~~~-~g~~~~i~~~~~--~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.-.+.. ..+++++.+.-. ..-.+..+|++.|. |+.+++-|+ .++|+|++ +....+.++++++||++...
T Consensus 356 ~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 356 TCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIKEFCD 432 (447)
T ss_pred ccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHHHHHH
Confidence 213333 333334433321 11234567888885 668888886 48999999 67888999999999999988
No 232
>PRK02948 cysteine desulfurase; Provisional
Probab=99.77 E-value=4.4e-17 Score=148.06 Aligned_cols=218 Identities=17% Similarity=0.157 Sum_probs=150.4
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++++++.++ +++++|++++++|++|.+.+ +++|.++|+++|+++++|++|+ ++.. .+....++.+.-+
T Consensus 126 ~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~--~~~~~~~~~d~~~ 195 (381)
T PRK02948 126 IRLVDLERAIT---PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKL--PIDVFEMGIDSLS 195 (381)
T ss_pred CCHHHHHHhcC---CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-cccc--ccCcccCCCCEEE
Confidence 47899998886 46889999999999999988 9999999999999999998886 3322 2223334433334
Q ss_pred EEecccccCCcccceeeEeCHHH-HhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 125 VILGKALGGGVIPVSAVLADKEV-MLCIQPG----EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
.+++|.+| .. ++|+++.++++ +....+. .....++.+.+++.++.++++...+ ++..++++++++++++.|
T Consensus 196 ~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 273 (381)
T PRK02948 196 VSAHKIYG-PK-GVGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQI 273 (381)
T ss_pred ecHHhcCC-CC-cEEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47789765 33 56888887764 2222110 1112346678888888888877633 445678888888888888
Q ss_pred HHHHhhCCCceeeEEEe----eeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------C
Q 021893 198 FKIQQQFPNYVKEVRGR----GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------D 250 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------~ 250 (306)
+++... +...... ..++.+.++ ..+..++...|.++||.++.+. .
T Consensus 274 ~~~~~~----v~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~ 345 (381)
T PRK02948 274 QTLPLP----IEVEGHSTSCLPHIIGVTIK----GIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAK 345 (381)
T ss_pred hcCCCC----EEEeCCCccCcCCEEEEEeC----CCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhC
Confidence 776311 1111101 122333333 2346778888889999998531 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++|++++..+|++|++.+++.|+++++ .+.+
T Consensus 346 ~~lRis~~~~~t~~di~~l~~~l~~~~~-~~~~ 377 (381)
T PRK02948 346 QFVRFSFGQQTTKDQIDTTIHALETIGN-QFYR 377 (381)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHHHHH-HHhc
Confidence 6899999999999999999999999988 6543
No 233
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.76 E-value=2.2e-17 Score=149.45 Aligned_cols=202 Identities=21% Similarity=0.344 Sum_probs=150.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++++++.|+ +++++|++.++.+.+|.+.+ +++|.++|+++|+++++|.+|+ .|.. .++...+.+|++
T Consensus 128 ~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~----~g~~-~id~~~~~~D~~ 195 (371)
T PF00266_consen 128 DLEDLEEALN---PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS----AGCV-PIDLDELGADFL 195 (371)
T ss_dssp SHHHHHHHHH---TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT----TTTS-S--TTTTTESEE
T ss_pred hhhhhhhhhc---cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc----cccc-ccccccccccee
Confidence 6999999997 68999999999999999999 9999999999999999999998 2221 133334567776
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCccCC------------------C---CCCHHHHHHHHHHHHHHhh---
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGST------------------F---GGNPLASAVAIASLDVIRD--- 179 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~aa~~al~~~~~--- 179 (306)
++| | ++|+. ++|+++++++.++.+++...... + +.+.....++..+++.+.+
T Consensus 196 ~~s~~K-l~gp~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 273 (371)
T PF00266_consen 196 VFSSHK-LGGPP-GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGI 273 (371)
T ss_dssp EEESTS-TTSSS-TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHH
T ss_pred eecccc-cCCCC-chhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhcccc
Confidence 554 9 99888 89999999999988855422111 1 3466667777788888854
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCcee----eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVK----EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------ 249 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------ 249 (306)
+++.++..++.+++++.|+++.. ... .....+.++.+.++ ..+..++.+.|.++||.++.+.
T Consensus 274 ~~i~~~~~~l~~~~~~~l~~~~~----~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~L~~~~I~~~~G~~~~~~~ 345 (371)
T PF00266_consen 274 ERIRERIRELAEYLREALEELPG----IEVLGPDDEPRRPSIVSFNLP----GSDADDVVKYLEERGIAVSTGSACAGPS 345 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT----EEESSSSCGGBGTTEEEEEET----TSSHHHHHHHHHHHTEEEEESTTTCHHH
T ss_pred ccchhhhhhHHHHHHhhhhcCCc----eeEeeecccccccceEEEeec----CCCHHHHHHHHhhcCEEEeccCcccHHH
Confidence 44667777888888888877532 221 12345666777775 4567899999999999988731
Q ss_pred ------CCEEEEeCCCCCCHHHHHHH
Q 021893 250 ------DTIVRLTPPLSISSNELQEG 269 (306)
Q Consensus 250 ------~~~lRi~~~~~~t~~~i~~~ 269 (306)
.+.+|++++.++|++||+++
T Consensus 346 ~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 346 LDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 38999999999999999875
No 234
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.76 E-value=1.2e-16 Score=144.69 Aligned_cols=212 Identities=16% Similarity=0.158 Sum_probs=143.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc----cccccccccCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR----SGRMLASDWEEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~----~g~~~~~~~~~~~ 121 (306)
|++.|++.|++ +++.+++..+++++|.+.+ +++|.++|+++|+++++|++|+++.. .+..+.... ..
T Consensus 140 d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--~~ 210 (371)
T PRK13520 140 DVKAVEDLIDD---NTIGIVGIAGTTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--PG 210 (371)
T ss_pred CHHHHHHHHhh---CCEEEEEEcCCcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC--CC
Confidence 89999999984 4666666666778898888 99999999999999999999985421 111121111 24
Q ss_pred CcEEEe--cccccCCcccceeeEe-CHHHHhhcCCCCcc----C----CCCCCHHHHHHHHHHHHHHhhc---cHHHHHH
Q 021893 122 PDMVIL--GKALGGGVIPVSAVLA-DKEVMLCIQPGEHG----S----TFGGNPLASAVAIASLDVIRDE---KLAERSA 187 (306)
Q Consensus 122 ~d~~s~--sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~----~----~~~~~~~~~~aa~~al~~~~~~---~~~~~~~ 187 (306)
.|.+++ .|...+|. ++|+++. ++++++.+...... . ..+.+...+.++.++++.+..+ +..++..
T Consensus 211 vd~~~~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 211 VDSITIDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred CceEEECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 566554 37555677 8887775 56676665421100 0 0112345567777788776543 3567778
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCCCHHHH
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNEL 266 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i 266 (306)
++.+++++.|++++ ..........++.+.++ ...++.+.|.++||.+.++. ++.+|++++..+|++|+
T Consensus 290 ~~~~~l~~~L~~~g-----~~~~~~~~~~~v~~~~~------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi 358 (371)
T PRK13520 290 ENTRWLAEELKERG-----FEPVIEPVLNIVAFDDP------NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHI 358 (371)
T ss_pred HHHHHHHHHHHhCC-----CEEecCCCceEEEEecC------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHH
Confidence 88888888887652 11011223334455443 36789999999999998764 56899998888999999
Q ss_pred HHHHHHHHHHHh
Q 021893 267 QEGSKALHDVLE 278 (306)
Q Consensus 267 ~~~~~~l~~~l~ 278 (306)
+.+++.|++.++
T Consensus 359 ~~~~~~l~~~~~ 370 (371)
T PRK13520 359 ENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHhh
Confidence 999999998875
No 235
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.76 E-value=2.1e-17 Score=147.63 Aligned_cols=216 Identities=15% Similarity=0.114 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccC
Q 021893 45 GDITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWE 118 (306)
Q Consensus 45 ~d~~~le~~i~~~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~ 118 (306)
.|+++|+++++++. +++++|++++++|+++ .. +.+.+++|.++|++||+++|+||+|..+ ...|.. ....
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~-~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~--~~~~ 183 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGT-VY-PLDELKAISALAKENGLPLHLDGARLANAAAALGVA--LKTY 183 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCcc-cc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCC--HHHH
Confidence 47999999997521 3678888888877644 43 7888999999999999999999998522 112221 1111
Q ss_pred CCCCc--EEEecccccCCcccce-eeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 119 EVRPD--MVILGKALGGGVIPVS-AVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 119 ~~~~d--~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
....| +.++||.++. +.| +++.++++++.+.... ...++..+.+.++++..+++.-...+..+++.++++++
T Consensus 184 ~~~~d~~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l 260 (338)
T cd06502 184 KSGVDSVSFCLSKGGGA---PVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRL 260 (338)
T ss_pred HhcCCEEEEeccccCCC---ccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 12334 4488899972 223 4567888888776432 12333445566666666664311123456777777888
Q ss_pred HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH---HCCceeccCCCCEEEEeCCCCCCHHHHHHHH
Q 021893 194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK---ERGILAKPTHDTIVRLTPPLSISSNELQEGS 270 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~---~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~ 270 (306)
.+.|++++.. ..+..+.++.+..+.. ......+.+.+. ++|+.+.+.+.+++|++++..++++|+++++
T Consensus 261 ~~~L~~~~~~------~~~~~~~~~~v~~~~~--~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~ 332 (338)
T cd06502 261 AEALEELGGL------ESEVQTNIVLLDPVEA--NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELL 332 (338)
T ss_pred HHHHHhcCCC------cccccCCeEEEecCCc--cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHH
Confidence 8888775321 1123344444444321 222334455443 6899998876689999999999999999999
Q ss_pred HHHHH
Q 021893 271 KALHD 275 (306)
Q Consensus 271 ~~l~~ 275 (306)
+++++
T Consensus 333 ~~l~~ 337 (338)
T cd06502 333 SALKA 337 (338)
T ss_pred HHHhc
Confidence 98864
No 236
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.75 E-value=1.4e-16 Score=144.79 Aligned_cols=213 Identities=15% Similarity=0.211 Sum_probs=145.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.|++.++ ++++++++++++|++|.+.+ +++|.++|+++|+++++|++|+ + |. ...+.....+|++
T Consensus 129 d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~---g~-~~~~~~~~~~D~~ 196 (382)
T TIGR03403 129 TAEQVREAIT---EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-I---GK-IPVDVQKAGVDFL 196 (382)
T ss_pred CHHHHHHhcc---cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-c---CC-CccCccccCCCEE
Confidence 6889998887 46889999999999999988 9999999999999999999987 2 21 1122223456777
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
++| |.+| .. ++|+++.+++. .+.+.. ....++.+..++.++.++++...+ +...+++++++++++
T Consensus 197 ~~s~~K~~g-p~-G~g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~ 272 (382)
T TIGR03403 197 SFSAHKFHG-PK-GVGGLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLE 272 (382)
T ss_pred EEcchhhCC-CC-ceEEEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 655 9654 33 46777776553 122211 112345677788788888876654 233456666666666
Q ss_pred HHHHHHHhhCCCceeeEE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------------------
Q 021893 195 QHLFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------------------- 249 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------------------- 249 (306)
+.|+++ ++.....+ ....++.+.+. ..+..++.+.|.++||.++.+.
T Consensus 273 ~~L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~ 344 (382)
T TIGR03403 273 DALLEL----PDVFVVGDREHRVPNTILISIK----GVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKEL 344 (382)
T ss_pred HHHhcC----CCEEEECCCCCCcCCEEEEEeC----CCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHH
Confidence 666553 21211111 11334455554 3456788888989999998421
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 -DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 -~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+.+|++++..+|++||+.+++.|+++++ ++..
T Consensus 345 ~~~~iR~s~~~~~t~~did~~~~~l~~~~~-~~~~ 378 (382)
T TIGR03403 345 AHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ-RLRA 378 (382)
T ss_pred hCeeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 26799999999999999999999999988 6554
No 237
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=3.7e-17 Score=145.99 Aligned_cols=200 Identities=17% Similarity=0.174 Sum_probs=130.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~ 124 (306)
|++.+++.+ +++++++++.++|++|.+.+ .++|.+++ ++++++|+||+|.+|... .... .+...-...+
T Consensus 130 d~~~l~~~~----~~~~~v~~~~P~NPtG~~~~----~~~l~~i~-~~~~~ii~De~y~~~~~~-~~~~~~~~~~~vi~l 199 (337)
T PRK03967 130 DGERIAEKA----KNASAVFICSPNNPTGNLQP----EEEILKVL-ETGKPVVLDEAYAEFSGK-SLIGLIDEYPNLILL 199 (337)
T ss_pred CHHHHHHhc----cCCCEEEEeCCCCCCCCCCC----HHHHHHHH-hcCCEEEEECchhhhccc-chHHHHhhCCCEEEE
Confidence 677787754 35667777788999997765 56666667 479999999999987421 1111 1111112234
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~ 202 (306)
.||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++..+++.... .+......+.++.+.+.|.+.
T Consensus 200 ~S~SK~~~l~Gl-RiG~iv~~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-- 274 (337)
T PRK03967 200 RTFSKAFGLAGI-RAGYAIANEEIIDALYRIK--PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-- 274 (337)
T ss_pred ecchHhhcchhh-hheeeecCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 49999999 999 9999999999988877543 2355677788887776653211 111122222233333333221
Q ss_pred hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 021893 203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLEL 279 (306)
Q Consensus 203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~ 279 (306)
..+..+.++|+.++ +.+.|.++||.+.+. ..+++|++. .+.++.+.+++.|+++.+
T Consensus 275 -------~~~~~~~~~~~~~~----------~~~~l~~~gi~v~~~~~~~~~~~Ri~~---~~~~~~~~l~~~l~~~~~- 333 (337)
T PRK03967 275 -------AYPSDANFLLLKLD----------AYDYLLENGIVVRKLSGRLEGHIRVTV---GKREENDEFIKALKEIKE- 333 (337)
T ss_pred -------cCCCCCcEEEEhHH----------HHHHHHHCCEEEEeCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHH-
Confidence 23456777776431 678899999998754 357999983 367788899999988876
Q ss_pred hc
Q 021893 280 DL 281 (306)
Q Consensus 280 ~~ 281 (306)
.+
T Consensus 334 ~~ 335 (337)
T PRK03967 334 GY 335 (337)
T ss_pred hc
Confidence 54
No 238
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.74 E-value=2e-16 Score=146.00 Aligned_cols=233 Identities=17% Similarity=0.117 Sum_probs=152.0
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----cccc---cc-cccc
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----LARS---GR-MLAS 115 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~~~~---g~-~~~~ 115 (306)
-|++.|++.|++++ +++++|+++.++|++|..+.+.+.+++|.++|++||++||+|+++.. |... |. ..+.
T Consensus 161 id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si 240 (460)
T PRK13238 161 FDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSI 240 (460)
T ss_pred cCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCH
Confidence 48999999998654 46999999999999886777899999999999999999999998852 1110 10 1111
Q ss_pred cc----CCCCCcEEEec--ccccCCcccceeeEeC-HHHHhhcCCCC---c-cCCCCCCHHH-HHHHHHHHHHHhhccHH
Q 021893 116 DW----EEVRPDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGE---H-GSTFGGNPLA-SAVAIASLDVIRDEKLA 183 (306)
Q Consensus 116 ~~----~~~~~d~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~---~-~~~~~~~~~~-~~aa~~al~~~~~~~~~ 183 (306)
.. ..-..|.+++| |...++. .|+++.+ +++++.++... + ..++++.... +.|+..+++...++++.
T Consensus 241 ~~i~~~~~s~~D~~~~Sg~K~g~~~~--GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~ 318 (460)
T PRK13238 241 KEIAREMFSYADGLTMSAKKDAMVNI--GGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYL 318 (460)
T ss_pred HHHhhhhcccCcEEEEecccCCCCcc--eeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHH
Confidence 00 00124555555 3222221 2456666 67888877652 2 3366665554 45555566655455556
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHC-CceeccCC--------
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKER-GILAKPTH-------- 249 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~-Gi~~~~~~-------- 249 (306)
....+.+++|.+.|++.+ .....+..|.++.+++.... ......+|+.+|+++ ||.+.|.+
T Consensus 319 ~~~~~~~~~l~~~L~~~G-----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~ 393 (460)
T PRK13238 319 AYRIGQVEYLGEGLEEAG-----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP 393 (460)
T ss_pred HHHHHHHHHHHHHHHHCC-----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCC
Confidence 666667788888888853 33344566777777765311 011357788888755 99887632
Q ss_pred ---------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893 250 ---------DTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMR 285 (306)
Q Consensus 250 ---------~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~ 285 (306)
...+|++.+- .-|.++++.+.++|+++.+ .-...+
T Consensus 394 ~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~-~~~~~~ 438 (460)
T PRK13238 394 KTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE-NRESIK 438 (460)
T ss_pred CCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH-hHhhcC
Confidence 4789999653 3389999999999998886 433333
No 239
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.73 E-value=1.8e-16 Score=145.10 Aligned_cols=216 Identities=17% Similarity=0.154 Sum_probs=138.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++++++.+.+ +++++++++++++ |...+ +++|.++|++||+++|+|++|. |+...|... ....+.+.-+
T Consensus 149 d~~~l~~~i~~--~~~~~v~~~~~~~--~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~-~~~~~~dv~~ 219 (402)
T cd00378 149 DYDALEKMALE--FKPKLIVAGASAY--PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP-NPLPGADVVT 219 (402)
T ss_pred CHHHHHHHHHh--CCCCEEEecCccc--CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCC-CcccCCcEEE
Confidence 89999999975 3567777655443 34455 9999999999999999999974 543333211 1111222223
Q ss_pred EEecccccCCcccceeeEeCH-HHHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHH
Q 021893 125 VILGKALGGGVIPVSAVLADK-EVMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~ 199 (306)
.|++|++ +|+ +.|++++++ ++++.+........++. +...+.++..++..... ++..++++++.+++++.|++
T Consensus 220 ~s~sK~l-~G~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 297 (402)
T cd00378 220 TTTHKTL-RGP-RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE 297 (402)
T ss_pred eccccCC-CCC-CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4888999 667 889998876 88877654322222222 22333333334443322 34566777888888888877
Q ss_pred HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCCCC----CCHHH
Q 021893 200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPLS----ISSNE 265 (306)
Q Consensus 200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~~----~t~~~ 265 (306)
.+.. +...+..+.++|+.+++. ......+.+.|.++||.+.+. ..+.+|++++.. .+.+|
T Consensus 298 ~g~~----~~~~~~~~~~v~v~~~~~--~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~d 371 (402)
T cd00378 298 RGFK----VVSGGTDNHLVLVDLRPK--GITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEE 371 (402)
T ss_pred CCCe----EeecCCCCeEEEEeCCcc--CCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHH
Confidence 5211 111224577788887642 224456777788889999631 346899987653 47999
Q ss_pred HHHHHHHHHHHHh
Q 021893 266 LQEGSKALHDVLE 278 (306)
Q Consensus 266 i~~~~~~l~~~l~ 278 (306)
++.+++.|+++++
T Consensus 372 i~~~~~~l~~~~~ 384 (402)
T cd00378 372 MEEIADFIARALK 384 (402)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999887
No 240
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.73 E-value=2.1e-16 Score=142.55 Aligned_cols=219 Identities=12% Similarity=0.095 Sum_probs=137.8
Q ss_pred CHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC
Q 021893 46 DITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~ 121 (306)
|++.++++++++. +++++++++++++++|...+ +++|.++|+++|+++|+|++|.. +. ..+....++.+
T Consensus 121 d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~~-g~--~~~~~~~~~~d 193 (361)
T cd06452 121 TPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYTV-GR--MPVSGKELGAD 193 (361)
T ss_pred CHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCccc-CC--cCCCHHHcCCC
Confidence 7899999987532 36889999999999998877 99999999999999999999971 11 12223333444
Q ss_pred CcEEEecccccCCcccceeeEeCHHHHhhcCCCCccC-----C---CCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHH
Q 021893 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS-----T---FGGNPLASAVAIASLDVIRDE-KLAERSAHLGEE 192 (306)
Q Consensus 122 ~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~ 192 (306)
..+.|++|+++++. ++|++++++++++.+....... . .+.....+.++.++++.+.+. +...+..++.++
T Consensus 194 ~~~~s~~K~l~~~~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 272 (361)
T cd06452 194 FIVGSGHKSMAASA-PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARW 272 (361)
T ss_pred EEEecCCccccCCC-CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44568889999777 9999999999888875432110 0 011122344444555443221 112222334466
Q ss_pred HHHHHHHHHhhCCCceee--EEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceecc-CCCCEEEEeCCCCCCHH
Q 021893 193 LRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSN 264 (306)
Q Consensus 193 l~~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~-~~~~~lRi~~~~~~t~~ 264 (306)
+++.|+++. +.... ......++.+..+... ......++.+.|+++||.... +..+.+|++.. ..+++
T Consensus 273 l~~~L~~l~----g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e 347 (361)
T cd06452 273 FVAELEKIE----GIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWE 347 (361)
T ss_pred HHHHHhcCC----CeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHH
Confidence 666666541 11111 1223344444433100 011234699999999999654 33567899863 36999
Q ss_pred HHHHHHHHHHHHH
Q 021893 265 ELQEGSKALHDVL 277 (306)
Q Consensus 265 ~i~~~~~~l~~~l 277 (306)
+++.+++.|+++.
T Consensus 348 ~~~~l~~al~~~~ 360 (361)
T cd06452 348 QVEYVVDAFKEIA 360 (361)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998664
No 241
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.73 E-value=4.6e-16 Score=141.08 Aligned_cols=210 Identities=16% Similarity=0.161 Sum_probs=145.0
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++++++.++ +++++++++.++|++|.+.+ +++|.++|+++|+++|+|++|+ +|.. .+.... ..+|+
T Consensus 125 ~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~--~~~~~~--~~~D~ 192 (376)
T TIGR01977 125 ISPERIKRAIK---TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVI--PIDMTE--LAIDM 192 (376)
T ss_pred cCHHHHHHhcC---CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCcc--CCCchh--cCCCE
Confidence 37899999886 47899999999999999988 9999999999999999999997 2111 122222 34566
Q ss_pred E--EecccccCCcccceeeEeCHHH-HhhcCCCC----------------ccCCCCCCHHHHHHHHHHHHHHhhc---cH
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEV-MLCIQPGE----------------HGSTFGGNPLASAVAIASLDVIRDE---KL 182 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~aa~~al~~~~~~---~~ 182 (306)
+ +..|++++.. ++|+++.+++. +..+.... .....+.+...+.+..++++++.+. .+
T Consensus 193 ~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~ 271 (376)
T TIGR01977 193 LAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANI 271 (376)
T ss_pred EEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 5 5559998655 66777666553 12211100 0011134566777777888888764 35
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceee----EEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC---------
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKE----VRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT--------- 248 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~--------- 248 (306)
.++..++.+++++.|++.. ++... ....+.++++.++ +.+..++.+.|.++ ||.++.+
T Consensus 272 ~~~~~~l~~~~~~~l~~~~----~~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~ 343 (376)
T TIGR01977 272 AKKECMLTEKLLNGLREIN----KVKIYGPADPANRVGVVSFTVE----GIDSEEVADILDEKFDIATRTGLHCAPLAHK 343 (376)
T ss_pred HHHHHHHHHHHHHHHhcCC----CeEEeCCCCccccCCeEEEEEC----CCCHHHHHHHHhccCCEEEEcccccchHHHH
Confidence 6677777777777776542 11111 1113556666665 24677899999988 8887653
Q ss_pred -----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 249 -----HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 249 -----~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
..+.||++++..+|++|++.++++|++
T Consensus 344 ~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 344 TIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 347899999999999999999999875
No 242
>PLN02368 alanine transaminase
Probab=99.73 E-value=1.9e-17 Score=150.73 Aligned_cols=214 Identities=10% Similarity=0.066 Sum_probs=139.4
Q ss_pred ceEEEEecCCCCcccchhccc-CCccccccCCCCCCC-----------ccccc-------CCCHHHHHHHHHhcC---Cc
Q 021893 3 AIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG-----------HLKVD-------FGDITALEKIFKESG---DQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~-------~~d~~~le~~i~~~~---~~ 60 (306)
..|++..|+.+|-..++..+. .+.+..-...|.|+. ++.++ ..|++.|++.++... .+
T Consensus 131 ~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~ 210 (407)
T PLN02368 131 ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGIT 210 (407)
T ss_pred hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCC
Confidence 368888888888766666554 333333333455544 12222 137899999997421 26
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cc-cccc----C-------CCCCcEEEe
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-ML-ASDW----E-------EVRPDMVIL 127 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~-~~~~----~-------~~~~d~~s~ 127 (306)
+++++++.++|+||.+ .+++.+++|.++|++||+++|+||+|.++.+.+. .+ +... . .....+.||
T Consensus 211 ~k~l~l~nP~NPTG~v-~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~Sf 289 (407)
T PLN02368 211 VRAMVIINPGNPTGQC-LSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTV 289 (407)
T ss_pred eEEEEEECCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecC
Confidence 7877777778999954 5899999999999999999999999998755442 22 1110 0 012223489
Q ss_pred cccc-c-CCcccceeeE---eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-----------hh-ccHHHHHHHHH
Q 021893 128 GKAL-G-GGVIPVSAVL---ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-----------RD-EKLAERSAHLG 190 (306)
Q Consensus 128 sK~~-~-~G~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-----------~~-~~~~~~~~~~~ 190 (306)
||.+ + +|+ |+||++ +++++++.+.... ...++.+.+++.++.++++.- .. .++.+.+++++
T Consensus 290 SK~~~~~~Gl-RiGy~i~~~~~~~li~~~~~~~-~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr 367 (407)
T PLN02368 290 SKGYWGECGQ-RGGYFEMTNIPPKTVEEIYKVA-SIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRA 367 (407)
T ss_pred CcccccCCcc-ceEEEEEeCCCHHHHHHHHHHh-cccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999 5 899 999998 4888888877642 345667888888888887521 11 12445666666
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+.+.+.|+++ ++.....+..++++|..++
T Consensus 368 ~~~~~~L~~~----~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 368 RMMTDGFNSC----KNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHHhCC----CCeEeCCCCeeeEeccCCC
Confidence 6666666665 1233344555666665443
No 243
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=8.6e-17 Score=140.72 Aligned_cols=222 Identities=21% Similarity=0.295 Sum_probs=164.3
Q ss_pred cccccCCCHHHHHHHHHhc----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-c
Q 021893 39 HLKVDFGDITALEKIFKES----------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-L 106 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~----------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~ 106 (306)
+.++.|||+++||++|++. +.+.-+|+++...++.|.++. |+++..++++|..+|+.||+|+ | .
T Consensus 245 iRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 245 TRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred EEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeecccccccc
Confidence 4889999999999999972 356778899999999999999 9999999999999999999998 3 4
Q ss_pred cccccccccccCCCCC---c--EEEeccccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHH
Q 021893 107 ARSGRMLASDWEEVRP---D--MVILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVI 177 (306)
Q Consensus 107 ~~~g~~~~~~~~~~~~---d--~~s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~ 177 (306)
|..|... ++.++.++ | +.+|.|+++ ||+ +.+++++++.++.......+ ..+++.+.....+++.+
T Consensus 321 g~tGrgv-ce~~g~d~~dvDImMGtftKSfga~GGy-----iagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i 394 (519)
T KOG1357|consen 321 GATGRGV-CEYFGVDPEDVDIMMGTFTKSFGAAGGY-----IAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHI 394 (519)
T ss_pred CCCCcce-eeccCCCchhheeecceehhhcccccce-----ecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhh
Confidence 5666655 56666544 3 348889998 566 99999999988876555555 34566666667778777
Q ss_pred hh-------ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----
Q 021893 178 RD-------EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK---- 246 (306)
Q Consensus 178 ~~-------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~---- 246 (306)
.- .+..+++.++..+++..|..++ .+..-.....++++.+.. ......+.+.|+++++.+.
T Consensus 395 ~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-----fivyG~~dSpVvplll~~---~~k~~~f~r~~l~~nigvVvvgf 466 (519)
T KOG1357|consen 395 MGEDGTNRGRQKIERLAENSRYFRWELQKMG-----FIVYGNNDSPVVPLLLYG---PAKIVAFSREMLERNIGVVVVGF 466 (519)
T ss_pred cCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-----EEEecCCCCCcceeeecC---cccccHHHHHHHhcCceEEEEeC
Confidence 52 2256777888888888888764 222223333344444442 2345578889998865543
Q ss_pred cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 247 PT---HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 247 ~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|+ -+...|++.+..++.++++.+++.+.+.=+
T Consensus 467 Patpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 467 PATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred CCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 22 246789999999999999999999876643
No 244
>PRK07908 hypothetical protein; Provisional
Probab=99.72 E-value=3.8e-16 Score=140.20 Aligned_cols=197 Identities=17% Similarity=0.146 Sum_probs=133.1
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC--CCcEEEeccccc-CCc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV--RPDMVILGKALG-GGV 135 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~--~~d~~s~sK~~~-~G~ 135 (306)
++++++++..++|+||.+.+ .++|.++|+ ++.++|+||+|.++. .+...+...... ...+.||||.++ +|+
T Consensus 138 ~~~~~i~l~np~NPTG~~~~----~~~l~~l~~-~~~~iIvDe~y~~~~-~~~~~~l~~~~~~~~i~i~S~SK~~~l~Gl 211 (349)
T PRK07908 138 DDADLVVIGNPTNPTSVLHP----AEQLLALRR-PGRILVVDEAFADAV-PGEPESLAGDDLPGVLVLRSLTKTWSLAGL 211 (349)
T ss_pred cCCCEEEEcCCCCCCCCCcC----HHHHHHHHh-cCCEEEEECcchhhc-cCCccccccccCCCEEEEeecccccCCccc
Confidence 46788888888999998876 567777786 478888999998763 233222211111 112338999998 999
Q ss_pred ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893 136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 212 (306)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 212 (306)
|+||+++++++++.+..... .+..+++.+.++...++... -++..++++++++++.+.|++. ++....+
T Consensus 212 -RiG~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p 283 (349)
T PRK07908 212 -RVGYALGAPDVLARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-----GARVVDP 283 (349)
T ss_pred -eeeeeecCHHHHHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-----CcEeccC
Confidence 99999999999988775332 24445555554444433100 1224555666666666666654 1222333
Q ss_pred EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 213 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 213 ~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..|.++|+.+++ ...+.+.|.++||.+.++ ++++||+++ .++++++.++++|++++.
T Consensus 284 ~~g~~~~~~~~~------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 284 AAAPFVLVRVPD------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred CCceEEEEECCc------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 568888987763 467888899999999874 257999995 477899999999988765
No 245
>PRK10534 L-threonine aldolase; Provisional
Probab=99.72 E-value=1.9e-16 Score=141.28 Aligned_cols=211 Identities=18% Similarity=0.221 Sum_probs=137.2
Q ss_pred CHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc---ccccccccCC
Q 021893 46 DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS---GRMLASDWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~---g~~~~~~~~~ 119 (306)
|+++|+++++.+. .++++|+++.++ +|.+. +.+.+++|.++|++|+++|++||+|. ++.. +... .....
T Consensus 112 d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~-~~~~~ 186 (333)
T PRK10534 112 PLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL-KEITQ 186 (333)
T ss_pred CHHHHHHhhcccCcCcccceEEEEecCC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH-HHHHh
Confidence 6899998886321 157777777544 47554 68889999999999999999999987 3211 2111 01111
Q ss_pred C-CCcEEEecccccCCcccce-eeEeCHHHHhhcCCCCccCC--CCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 120 V-RPDMVILGKALGGGVIPVS-AVLADKEVMLCIQPGEHGST--FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 120 ~-~~d~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
. ..-+++|||+++ . ++| |+++++++++.++....... +..+.+.++++.++++.. .+..++..+.++++.+
T Consensus 187 ~~~~~~~s~SK~~~--~-~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~ 261 (333)
T PRK10534 187 YCDSFTICLSKGLG--T-PVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAE 261 (333)
T ss_pred cCCEEEEEeEcCCC--C-cccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHH
Confidence 1 112458999877 2 456 57789999888765332221 222334555555666432 1223344445667777
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.|++.+.. ..+..++++++.++. .+..++.+.|.++||.+.++ ..+|++....+|++++++++++|++
T Consensus 262 ~L~~~g~~------~~~~~~nfv~~~~~~----~~~~~~~~~l~~~gi~v~~~--~~~rl~~~~r~t~e~~~~~~~~l~~ 329 (333)
T PRK10534 262 QLREAGAD------VMRQDTNMLFVRVGE----EQAAALGEYMRERNVLINAS--PIVRLVTHLDVSREQLAEVVAHWRA 329 (333)
T ss_pred HHHhCCCc------cCCCCceEEEEECCc----hhHHHHHHHHHHcCeeecCC--ceEEEEEEeCCCHHHHHHHHHHHHH
Confidence 77775321 122357777776652 24567889999999999886 2589986656799999999999998
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
++.
T Consensus 330 ~~~ 332 (333)
T PRK10534 330 FLA 332 (333)
T ss_pred Hhc
Confidence 765
No 246
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.71 E-value=1.4e-15 Score=137.74 Aligned_cols=212 Identities=16% Similarity=0.165 Sum_probs=140.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc----cccc-ccccCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS----GRML-ASDWEE 119 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~----g~~~-~~~~~~ 119 (306)
.|++++++.++++ ..+++++. +++++|.+.+ +++|.++|+++|+++++|++|+++... |... ..+..-
T Consensus 141 ~d~~~l~~~l~~~--~~~vv~~~-~~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~ 213 (373)
T TIGR03812 141 VDVKDVEDLIDDN--TIGIVGIA-GTTELGQIDD----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSL 213 (373)
T ss_pred cCHHHHHHHHhhC--cEEEEEEC-CCCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccC
Confidence 3799999999742 23556666 4678898888 999999999999999999999853110 0000 011111
Q ss_pred CCCcEEEec--ccccCCcccceeeE-eCHHHHhhcCCCCcc--CC------CCCCHHHHHHHHHHHHHHhhc---cHHHH
Q 021893 120 VRPDMVILG--KALGGGVIPVSAVL-ADKEVMLCIQPGEHG--ST------FGGNPLASAVAIASLDVIRDE---KLAER 185 (306)
Q Consensus 120 ~~~d~~s~s--K~~~~G~~~~g~~~-~~~~~~~~~~~~~~~--~~------~~~~~~~~~aa~~al~~~~~~---~~~~~ 185 (306)
...|.++++ |...++. +.|+++ .++++++.+...... .. .+.+...++++.++++.+..+ +..++
T Consensus 214 ~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~ 292 (373)
T TIGR03812 214 PGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAE 292 (373)
T ss_pred CCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 134555544 8444666 787554 577777765421111 00 123455677777888876543 36778
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHH
Q 021893 186 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSN 264 (306)
Q Consensus 186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~ 264 (306)
..++.+++++.|+++. ..........++.+.++ ...++.+.|.++||.+... .++++|++++..++++
T Consensus 293 ~~~~~~~l~~~L~~~g-----~~~~~~~~~~~v~~~~~------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~e 361 (373)
T TIGR03812 293 CMENTRYLVEELKKIG-----FEPVIEPVLNIVAFEVD------DPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTRE 361 (373)
T ss_pred HHHHHHHHHHHHHhCC-----CeEEcCCCceEEEEEeC------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHH
Confidence 8888888888888763 11111223344444443 2357999999999999876 5679999998899999
Q ss_pred HHHHHHHHHHH
Q 021893 265 ELQEGSKALHD 275 (306)
Q Consensus 265 ~i~~~~~~l~~ 275 (306)
|++.+++.|++
T Consensus 362 did~l~~~L~~ 372 (373)
T TIGR03812 362 HIEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 247
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=3e-15 Score=136.65 Aligned_cols=216 Identities=19% Similarity=0.245 Sum_probs=146.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccccccccccc--ccCCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLAS--DWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~--~~~~~~~ 122 (306)
|.+++++++++ ++..+++.+.++.++ ..+ +++|+++|++||++|++|++|+ |+.. |..... ... ...
T Consensus 208 D~d~l~~~~~~---~~plvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~~Glig-g~~~~~~~~~~-~~~ 277 (493)
T PRK13580 208 DYDEIAALARE---FKPLILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHFAGLVA-GKVFTGDEDPV-PHA 277 (493)
T ss_pred CHHHHHHHHhh---cCCEEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchhhceec-cccchhhcCCC-CCC
Confidence 78999999984 566777777776654 667 9999999999999999999998 5421 222210 111 134
Q ss_pred cEE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHH
Q 021893 123 DMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQH 196 (306)
Q Consensus 123 d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~ 196 (306)
|++ |++|++.|. +.|++++++++.+.+.... ...++ ..+...+++..++..+.+. ++.+++.++.+.|++.
T Consensus 278 D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~ 354 (493)
T PRK13580 278 DIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEG 354 (493)
T ss_pred cEEEeCChhhccCC--CeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 544 778999643 3467999999888774321 12222 2233444444456655432 3688999999999999
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------C---CCEEEEeCCC----CCC
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------H---DTIVRLTPPL----SIS 262 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~---~~~lRi~~~~----~~t 262 (306)
|.+.+... + .......++++.+.+. ......+.+.|.++||.+.+. + +..||++++. .++
T Consensus 355 L~~~G~~v---v-~ggTdshIV~V~lg~~--~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~t 428 (493)
T PRK13580 355 FLKRGARL---V-TGGTDNHLVLIDVTSF--GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMG 428 (493)
T ss_pred HHhcCCCc---c-CCCCCCCEEEEEeCCH--HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCC
Confidence 98875331 1 1113457777777641 223446778999999998732 2 5679999887 456
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 021893 263 SNELQEGSKALHDVLELDL 281 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~~~~ 281 (306)
++|++.+++.|.++++ ..
T Consensus 429 eedi~~iad~l~~~l~-~~ 446 (493)
T PRK13580 429 SDEMDEVAELIVKVLS-NT 446 (493)
T ss_pred HHHHHHHHHHHHHHHH-hh
Confidence 9999999999999988 54
No 248
>PLN02242 methionine gamma-lyase
Probab=99.69 E-value=2.2e-16 Score=144.28 Aligned_cols=256 Identities=12% Similarity=0.121 Sum_probs=156.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCC--------------CC--cccccCCCHHHHHHHHHhcCCcEEEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL--------------PG--HLKVDFGDITALEKIFKESGDQIAGFLF 66 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~d~~~le~~i~~~~~~~~~v~v 66 (306)
..++++.+++++...+..++..+.+..-...|.| .+ +.+++..|++.++++++. .++++|++
T Consensus 92 ~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~--~~tklV~l 169 (418)
T PLN02242 92 EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVP--GKTKVLYF 169 (418)
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCc--CCCEEEEE
Confidence 3566777777776666555444322111111222 12 234555689999999873 15899999
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCccc-ceeeEeC
Q 021893 67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIP-VSAVLAD 144 (306)
Q Consensus 67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~-~g~~~~~ 144 (306)
+.++|++|.+.+ +++|.++|++||+++|+|++|+.+... ...++.+..+.|+||.++ +|. + .||++++
T Consensus 170 esp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~~-----~~~~g~divv~S~SK~l~g~g~-~~gG~iv~~ 239 (418)
T PLN02242 170 ESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVLS-----PARLGADVVVHSISKFISGGAD-IIAGAVCGP 239 (418)
T ss_pred ecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCCC-----HHHcCCcEEEEeCccccCCCCC-ceEEEEEcC
Confidence 999999999887 999999999999999999999743211 112233444558999998 466 5 5899999
Q ss_pred HHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh--hCCCce---------ee
Q 021893 145 KEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQ--QFPNYV---------KE 210 (306)
Q Consensus 145 ~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~---------~~ 210 (306)
+++++.+...... .........+.+++.+.. +.. ....++.+++++.+.+.|++... .+|+.. ..
T Consensus 240 ~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~-l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~ 318 (418)
T PLN02242 240 AELVNSMMDLHHGALMLLGPTMNPKVAFELSER-LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSM 318 (418)
T ss_pred HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHh
Confidence 9988887654331 112222223333332221 111 22345777888888888887631 111100 01
Q ss_pred E---EEeeeEEEEEEecCCChhhHHHHHHHHHHC----Cceec----------cC-----------------CCCEEEEe
Q 021893 211 V---RGRGLFNAVEFDKTALPVSAYDICLKMKER----GILAK----------PT-----------------HDTIVRLT 256 (306)
Q Consensus 211 ~---~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~----Gi~~~----------~~-----------------~~~~lRi~ 256 (306)
. .+.|.++.|++.. ...+..|++.+.-- .+.++ |. .++.+|++
T Consensus 319 ~~~~~g~g~~~sf~l~~---~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRls 395 (418)
T PLN02242 319 ANKGYGFGGLLCLDMDT---EERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMS 395 (418)
T ss_pred cccCCCceeEEEEEECC---HHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEE
Confidence 1 2568889998853 34566777777611 11111 10 24689999
Q ss_pred CCCCCCHH-HHHHHHHHHHHHHh
Q 021893 257 PPLSISSN-ELQEGSKALHDVLE 278 (306)
Q Consensus 257 ~~~~~t~~-~i~~~~~~l~~~l~ 278 (306)
.. -| +.+.+++.|+++|+
T Consensus 396 vG----lE~~~~dli~dl~~al~ 414 (418)
T PLN02242 396 VG----YTGTLEQRWSQFEKALS 414 (418)
T ss_pred ec----CCCCHHHHHHHHHHHHH
Confidence 43 35 37778888888877
No 249
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.69 E-value=6.4e-15 Score=134.97 Aligned_cols=217 Identities=18% Similarity=0.165 Sum_probs=137.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|++++++.++.+ ++++|+++.. ..|...+ +++|.++|++||++|++|++|+ |....|.. ..... ..|
T Consensus 155 ~d~~~le~~l~~~--~~klVi~~~~--~~g~~~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~-~~D 223 (416)
T PRK13034 155 IDYDEVEELAKEH--KPKLIIAGFS--AYPRELD----FARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP-HAH 223 (416)
T ss_pred cCHHHHHHHHhhc--CCeEEEECCC--ccccccC----HHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC-Cce
Confidence 6899999998753 4678877432 2355566 9999999999999999999997 43222321 11111 245
Q ss_pred EE--EecccccCCcccceeeEeC-HHHHhhcCCCCccC-CCCCCHHHHHHHH-HHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGS-TFGGNPLASAVAI-ASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~aa~-~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
++ +++|+++|+. .|+++++ +.+.+.++.....+ .-...+...+++. +.++.+.. .++.+++.++.+++++.
T Consensus 224 i~~~s~~K~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~ 301 (416)
T PRK13034 224 VVTTTTHKTLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEV 301 (416)
T ss_pred EEEEeCcccCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 54 6779996543 2456665 44444444321111 1112233333333 44444322 33578999999999999
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----------CCCCEEEEeCCC----CCC
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----------THDTIVRLTPPL----SIS 262 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----------~~~~~lRi~~~~----~~t 262 (306)
|++.+... . .........++.+.+. ......+.+.|.++||.+.+ ..+..+|++++. .++
T Consensus 302 L~~~G~~~---~-~~~~~t~i~~v~~~~~--~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~ 375 (416)
T PRK13034 302 LKERGYDL---V-SGGTDNHLLLVDLRPK--GLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFG 375 (416)
T ss_pred HHHcCCEe---c-cCCCCCcEEEEEcCCC--CCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCC
Confidence 98763221 1 1112455566666542 23556677888889999874 234579999887 677
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 021893 263 SNELQEGSKALHDVLELDL 281 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~~~~ 281 (306)
++|++.+++.|++++. +.
T Consensus 376 ~~di~~l~~~l~~~~~-~~ 393 (416)
T PRK13034 376 EAEFREIANWILDVLD-DL 393 (416)
T ss_pred HHHHHHHHHHHHHHHh-cC
Confidence 9999999999999988 55
No 250
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.69 E-value=3.7e-16 Score=141.17 Aligned_cols=217 Identities=18% Similarity=0.179 Sum_probs=143.6
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++.+|++++++.++ +++++|++++++|++|.+.+ +++|.++|++||+++|+|++++... . ....
T Consensus 107 ~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~~-~-----~~~~ 173 (369)
T cd00614 107 VTFVDPDDPEALEAAIK---PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATPY-L-----QRPL 173 (369)
T ss_pred EEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcchh-c-----CChh
Confidence 45667788999999987 47899999999999999888 9999999999999999999997321 1 1122
Q ss_pred CCCCcEE--EecccccC-C-cccceeeEeCH-HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 119 EVRPDMV--ILGKALGG-G-VIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 119 ~~~~d~~--s~sK~~~~-G-~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
....|++ |++|.++| | . +.|++++++ ++++.++..........++..+.++..+++.+.. ..++..++.+.+
T Consensus 174 ~~g~Divv~S~tK~l~g~~~~-~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~--r~~~~~~na~~l 250 (369)
T cd00614 174 ELGADIVVHSATKYIGGHSDV-IAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPL--RMERHSENALKV 250 (369)
T ss_pred hhCCcEEEeccceeccCCCCc-eEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHH--HHHHHHHHHHHH
Confidence 2344554 88899984 3 5 789999976 7877776543333445566666666666654332 356667778888
Q ss_pred HHHHHHHHhh----CCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC--
Q 021893 194 RQHLFKIQQQ----FPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT-- 248 (306)
Q Consensus 194 ~~~L~~~~~~----~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~-- 248 (306)
.+.|++.... +|... ....+.|.++.+.+... ......|.+.|.--.+.++ |.
T Consensus 251 a~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~ 328 (369)
T cd00614 251 AEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGG--LEAAKKFLNALKLFSLAVSLGGVESLVEHPASM 328 (369)
T ss_pred HHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCC--HHHHHHHHHcCCcceEcccCCCCceeeeCCccc
Confidence 8888765311 11100 01235688889888631 3345556555542211111 10
Q ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.+|++..+ ||.+.+++.|++++
T Consensus 329 ~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 329 THSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 24689999544 67888888888776
No 251
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.8e-16 Score=130.84 Aligned_cols=222 Identities=16% Similarity=0.154 Sum_probs=162.6
Q ss_pred CHHHHHHHHHh-----cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893 46 DITALEKIFKE-----SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 120 (306)
Q Consensus 46 d~~~le~~i~~-----~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~ 120 (306)
|++++|+.+.. |.+.+++|.+|..+++.|.++.+-|++.++.++|+++|+-|.+|.+.-.-.......+.....-
T Consensus 135 ~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~ 214 (384)
T KOG1368|consen 135 DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICS 214 (384)
T ss_pred eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHH
Confidence 69999999994 3467999999999999888888999999999999999999999988752211112222222222
Q ss_pred CCc--EEEecccccCCcccce-eeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 121 RPD--MVILGKALGGGVIPVS-AVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 121 ~~d--~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
..| -+|+||++| +|+| .++++++++++.+.. ..++.+....+.+++++.+++.... ...+..++.+.+.+
T Consensus 215 ~fDSVsiCLSKglg---APVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~--~L~~dHk~A~~lAe 289 (384)
T KOG1368|consen 215 AFDSVSICLSKGLG---APVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVP--LLRADHKRAKELAE 289 (384)
T ss_pred hhhhhhhhhhccCC---CCcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchH--HHHHHHHHHHHHHH
Confidence 234 348999999 3445 578899999876532 3555666777888888887764322 45566667777777
Q ss_pred HHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
.++... .....++ ....++.+.+... ..+.+++++.+.++||.+-++....+|+.++...|.++++....++.
T Consensus 290 ~~~~~~----~i~v~v~a~etNiv~~~l~q~--~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 290 YINTPE----EIRVEVPAVETNIVNMVLCQA--RLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred Hhcccc----ceeeecchhhcceeeeecccc--cCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHH
Confidence 777442 2334444 4566667666542 46788999999999999998877889999999999999999999995
Q ss_pred HHHh
Q 021893 275 DVLE 278 (306)
Q Consensus 275 ~~l~ 278 (306)
+.+.
T Consensus 364 k~~~ 367 (384)
T KOG1368|consen 364 KKFL 367 (384)
T ss_pred HHHH
Confidence 4443
No 252
>PLN02651 cysteine desulfurase
Probab=99.68 E-value=1.6e-15 Score=136.97 Aligned_cols=201 Identities=17% Similarity=0.196 Sum_probs=139.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++++++|+ +++++++++++++++|.+.+ +++|.++|+++|+++++|.+|+ .|. ..++...+.+|++
T Consensus 127 d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~----~g~-~~~~~~~~~~D~~ 194 (364)
T PLN02651 127 DLDELAAAIR---PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA----VGK-IPVDVDDLGVDLM 194 (364)
T ss_pred CHHHHHHhcC---CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh----hCC-cccCcccCCCCEE
Confidence 7899999997 57899999999999999998 9999999999999999999998 122 1123333456777
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc-------CCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
++| |. +|.. ++|+++.+++....+.+...+ ...+.+..++.++.++++.+.+ ++..++.+++.++++
T Consensus 195 ~~s~hK~-~gp~-G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~ 272 (364)
T PLN02651 195 SISGHKI-YGPK-GVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLL 272 (364)
T ss_pred Eechhhh-CCCC-ceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 554 95 5555 789999998877666543221 1234567778888888888764 345677777777777
Q ss_pred HHHHHHHhhCCCceee--E-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------------------
Q 021893 195 QHLFKIQQQFPNYVKE--V-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------------------- 249 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~--~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------------------- 249 (306)
+.|++....+ ..... . .....++.+.++ +.+++++.+.|.+ |.++.+.
T Consensus 273 ~~l~~~~~~~-~i~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~ 345 (364)
T PLN02651 273 NGLRAKLGGV-RVNGPRDPEKRYPGTLNLSFA----YVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEM 345 (364)
T ss_pred HHHHhhCCCE-EEECCCCcccCcCCEEEEEeC----CCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHH
Confidence 7776531111 01111 1 112345666665 3457788888865 6665321
Q ss_pred -CCEEEEeCCCCCCHHHHH
Q 021893 250 -DTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 250 -~~~lRi~~~~~~t~~~i~ 267 (306)
.+.+|+|++.++|++||+
T Consensus 346 ~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 346 AHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred hCceEEEEcCCCCCHHHcC
Confidence 368999999999999975
No 253
>PRK06460 hypothetical protein; Provisional
Probab=99.67 E-value=1.5e-15 Score=137.23 Aligned_cols=219 Identities=14% Similarity=0.145 Sum_probs=138.9
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++.++.+.+++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+||+|... ..... . .++
T Consensus 113 ~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~-~~~~~--l-~~~ 181 (376)
T PRK06460 113 DASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTP-INQKP--L-ELG 181 (376)
T ss_pred EEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc-ccCCh--h-hcC
Confidence 4455556556665544 57899999999999999988 899999999999999999999732 11111 1 123
Q ss_pred CCCcEEEecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 120 ~~~d~~s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L 197 (306)
.+..+.|+||.++| +. ++||+++++++++.++........+.++..+..++..++++.. ..+++.++++++.+.|
T Consensus 182 ~divv~S~sK~l~G~~~~-~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l~~--r~~~~~~n~~~l~~~L 258 (376)
T PRK06460 182 ADIVVHSASKFLAGHNDV-IAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTLKI--RMDVINRNAEQIAEFL 258 (376)
T ss_pred CCEEEeecceeccCCCCc-eEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHH
Confidence 23334488999974 45 7899999999888776433333333455544444455555533 4667778888888888
Q ss_pred HHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCcee--------cc-------
Q 021893 198 FKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILA--------KP------- 247 (306)
Q Consensus 198 ~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~--------~~------- 247 (306)
++... .+|... ....+.|.++.|++... ......|++.|. ..+.-. .|
T Consensus 259 ~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~--~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~ 336 (376)
T PRK06460 259 EGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG--QESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRT 336 (376)
T ss_pred HcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc--HHHHHHHHHhCCcceeccCCCCCceEEeCcccccccc
Confidence 86421 111000 11245788899998631 233455655553 111111 11
Q ss_pred ----------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 248 ----------THDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 248 ----------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..++.||+++. -||.+.+++.|+++|+
T Consensus 337 ~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~ 373 (376)
T PRK06460 337 LSLEERKIVGITDSLLRLSVG----IEDVNDLIEDLDRALS 373 (376)
T ss_pred CCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence 12578999943 3667778888888876
No 254
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.67 E-value=9.1e-16 Score=139.29 Aligned_cols=216 Identities=14% Similarity=0.079 Sum_probs=140.7
Q ss_pred cccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893 41 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 120 (306)
Q Consensus 41 ~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~ 120 (306)
.++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.. ..+..+ ..+.
T Consensus 130 ~~~~~d~~~l~~~i~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~-~~~~pl---~~g~ 198 (386)
T PRK06767 130 FCDMETEADIENKIR---PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSP-YLQRPL---ELGC 198 (386)
T ss_pred EeCCCCHHHHHHhhC---cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCccc-ccCCch---hcCC
Confidence 344568899999887 57899999999999999888 999999999999999999999621 111111 1233
Q ss_pred CCcEEEecccccC-Ccccc-eeeEeCHHHHhhcCC-CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALGG-GVIPV-SAVLADKEVMLCIQP-GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 121 ~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L 197 (306)
+..+.|++|.++| |. ++ |+++++++.++.+.. .........+++.+.++..+++.+.. ..++.+++.+.+.+.|
T Consensus 199 Div~~S~sK~l~g~g~-~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~~--r~~~~~~~a~~la~~L 275 (386)
T PRK06767 199 DAVVHSATKYIGGHGD-VVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLAV--RMDRHCDNAEKIVSFL 275 (386)
T ss_pred cEEEecCcceecCCCC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHH
Confidence 3334477899985 66 65 789898887766432 11111112345555555555544322 3466677778888887
Q ss_pred HHHHhhCCCcee---------eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------------------
Q 021893 198 FKIQQQFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------------------- 248 (306)
Q Consensus 198 ~~~~~~~~~~~~---------~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------------- 248 (306)
++....- .+. ...+.|.++.|++... ......|.+.|...++.++-+
T Consensus 276 ~~~p~v~--~v~~p~~~~~~~~~~~~gg~vsf~l~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~ 351 (386)
T PRK06767 276 KNHDAVE--GVWYPEGELASRQMKRGGGVISFSIKGG--KEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAE 351 (386)
T ss_pred HcCCCcc--EEECCCcHHHHHhCCCCCceEEEEEcCC--HHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHH
Confidence 7653110 111 2235677888888631 345678888887776555421
Q ss_pred -------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|++.. -||.+.+++-|.+++.
T Consensus 352 ~~~~~gi~~~l~R~svG----lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 352 LRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALK 384 (386)
T ss_pred HHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2468999944 3567777888877776
No 255
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.67 E-value=7.4e-15 Score=134.35 Aligned_cols=212 Identities=15% Similarity=0.239 Sum_probs=138.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.+++.++ +++++++++++++++|.+.+ +++|.++|+++|+++++|++|+ + |.. .++..+..+|++
T Consensus 131 d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~---g~~-~~~~~~~~~D~~ 198 (402)
T TIGR02006 131 DLEELKAAIR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-V---GKI-PINVNELKVDLM 198 (402)
T ss_pred CHHHHHHhcC---CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-c---CCc-ccCccccCCCEE
Confidence 7899999887 46899999999999999988 9999999999999999999997 2 211 123334567888
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc-------CCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
++| |.++ .. ++|+++.+++....+.+.... ...+.+.....+..++++.+.. +...++.+++.++++
T Consensus 199 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~ 276 (402)
T TIGR02006 199 SISGHKIYG-PK-GIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLL 276 (402)
T ss_pred EEehhhhcC-CC-ceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 777 9654 44 678888887655444433221 1124456666666688877654 234456666666666
Q ss_pred HHHHHHHhhCCCceee--EEEe-eeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------------------
Q 021893 195 QHLFKIQQQFPNYVKE--VRGR-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------------------- 248 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~--~~~~-g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------------------- 248 (306)
+.|+++. ++... .... ...+.+.+.. ....++...+ +++.++.+
T Consensus 277 ~~l~~~~----~v~~~~~~~~~~p~~~~v~f~~----~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~ 346 (402)
T TIGR02006 277 NGIKSIE----EVYLNGDLEHRVPGNLNVSFNY----VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDEL 346 (402)
T ss_pred HHHhcCC----CEEEeCCccccCCCeEEEEEeC----cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhh
Confidence 6665532 11111 1111 1111233332 2234455444 34443311
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 249 HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
..+.+|++++..+|++|++.+++.|+++++ .+.
T Consensus 347 ~~~~vR~S~~~~~t~edid~l~~~l~~~~~-~~~ 379 (402)
T TIGR02006 347 AHSSIRFTIGRFTTEEEIDYAVKLVKSAID-KLR 379 (402)
T ss_pred cCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 137899999999999999999999999988 654
No 256
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=4.9e-15 Score=123.65 Aligned_cols=220 Identities=15% Similarity=0.239 Sum_probs=154.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc--
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD-- 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d-- 123 (306)
|++.|+ + .+.+.+|+++-+.|+||.+. +.+.+.+|-.++++||++|+.|.+|+- -.++-.|.--..-+.++
T Consensus 170 DF~~l~--i---~e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~~~w~~Nii 242 (417)
T COG3977 170 DFEHLH--I---GESTGAICVSRPTNPTGNVL-TDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDATPLWNENII 242 (417)
T ss_pred CHHHcc--c---ccccceEEecCCCCCCCCcc-cHHHHHHHHHHhhhcCCcEEEecccCC-CCCceecccccccCCCCEE
Confidence 566654 2 25799999999999999765 899999999999999999999999972 12333332111123344
Q ss_pred -EEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-----HhhccHHHHHHHHHHHHHHHH
Q 021893 124 -MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-----IRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 124 -~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-----~~~~~~~~~~~~~~~~l~~~L 197 (306)
+.|+||.=-+|. |+|.+++++++++.+....-.....+..++.+.+...++- +.++=++..++.........|
T Consensus 243 lC~SLSK~GLPG~-R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l 321 (417)
T COG3977 243 LCMSLSKLGLPGS-RCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAIL 321 (417)
T ss_pred EEeehhhcCCCCc-ceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 347778555898 9999999999999988754444444444554444433332 112223455666666666677
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------CCEEEEeCCCCCCHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------DTIVRLTPPLSISSN 264 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------~~~lRi~~~~~~t~~ 264 (306)
++....++ +..-.+....++|+=+.+ .+....+++++|+.+|+++.|+. -.++|++ +..+++
T Consensus 322 ~~~lp~~~-~~iHkpEGAIFlWLWf~d--LPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~~~~ 396 (417)
T COG3977 322 RRYLPEYR-CLIHKPEGAIFLWLWFKD--LPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVPEPE 396 (417)
T ss_pred HHhcCccc-eeeecCCcceeehhhhcc--CCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCCCHH
Confidence 77666653 555555555566655555 34778899999999999999862 3689999 888999
Q ss_pred HHHHHHHHHHHHHh
Q 021893 265 ELQEGSKALHDVLE 278 (306)
Q Consensus 265 ~i~~~~~~l~~~l~ 278 (306)
+|+..+.+|.+.++
T Consensus 397 ~ie~Gva~lae~ve 410 (417)
T COG3977 397 KIEKGVAILAEEVE 410 (417)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998887
No 257
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.66 E-value=4.8e-15 Score=132.81 Aligned_cols=200 Identities=18% Similarity=0.126 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC-C
Q 021893 45 GDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE-V 120 (306)
Q Consensus 45 ~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~-~ 120 (306)
.|+++|++++++ ++.++++++++.+++++|.+.+ +++|.++|+++|+++++|++|+++............. .
T Consensus 130 ~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 205 (345)
T cd06450 130 MDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE 205 (345)
T ss_pred cCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc
Confidence 489999999985 2226778888888888998877 9999999999999999999998542211100000011 1
Q ss_pred CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q 021893 121 RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQ 195 (306)
Q Consensus 121 ~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~ 195 (306)
..|.+ +++|.+++++ ++|+++.+ ..++.++++.+.. ++..++..++.+++++
T Consensus 206 ~~d~~~~s~~K~l~~p~-g~g~~~~~----------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~ 262 (345)
T cd06450 206 RVDSISVDPHKYGLVPL-GCSAVLVR----------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAE 262 (345)
T ss_pred ccCEEEEchhHhhCCCc-chHHHHHH----------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 34544 6779888877 88887655 3333344444433 3345666666777776
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecC-CChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCC-CCHHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKT-ALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLS-ISSNELQEG 269 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~-~t~~~i~~~ 269 (306)
.|+++. +.....+..+.++.+.+++. ..+....++.+.|.++|+++.+. ...++|++++.. ++++|++++
T Consensus 263 ~L~~~~----~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l 338 (345)
T cd06450 263 LIRADP----GFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADAL 338 (345)
T ss_pred HHhcCC----CeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHH
Confidence 666542 12111222345556655531 00245678999999996554432 357899999876 499999999
Q ss_pred HHHHHH
Q 021893 270 SKALHD 275 (306)
Q Consensus 270 ~~~l~~ 275 (306)
++.|++
T Consensus 339 ~~~l~~ 344 (345)
T cd06450 339 LEDIER 344 (345)
T ss_pred HHHHHh
Confidence 999875
No 258
>PRK07049 methionine gamma-lyase; Validated
Probab=99.66 E-value=2.4e-15 Score=137.91 Aligned_cols=258 Identities=13% Similarity=0.137 Sum_probs=154.6
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCc---------------ccc-cCCCHHHHHHHHHhc--CCcEEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH---------------LKV-DFGDITALEKIFKES--GDQIAGFL 65 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~d~~~le~~i~~~--~~~~~~v~ 65 (306)
.++++.+|..+-.....++..+.+..-...|.|++. +.+ ...|++.+++.+++. .+++++|+
T Consensus 100 ~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~ 179 (427)
T PRK07049 100 SAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLIL 179 (427)
T ss_pred cEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEE
Confidence 466677777665444444444332222223344321 112 234788888888642 24689999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHH------cCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc--CCccc
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG--GGVIP 137 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~------~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~--~G~~~ 137 (306)
++.++|++|.+.+ +++|.++++. +++++|+||++.++.... . . ..+....+-|+||.++ +|+ +
T Consensus 180 lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-p--l-~~g~divv~S~SK~~gG~~gl-r 250 (427)
T PRK07049 180 IETPANPTNSLVD----VAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-P--L-EHGADLSVYSLTKYVGGHSDL-V 250 (427)
T ss_pred EECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEEEEECCccccccCC-c--c-ccCCCEEEEcCceeecCCCCc-E
Confidence 9999999998776 5555555555 899999999986431111 1 1 1222233449999999 588 9
Q ss_pred ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCce-----
Q 021893 138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV----- 208 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~----- 208 (306)
+||+++++++++.++........+.++..+.++..+++.+... .++..+++..+.+.|++... .+|+..
T Consensus 251 ~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R--~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~ 328 (427)
T PRK07049 251 AGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLR--MERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSA 328 (427)
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHH--HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCc
Confidence 9999999998887765433334456777777777777654332 44556677777777776421 122110
Q ss_pred ------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Cceec--------cC-----------------CCCEEEE
Q 021893 209 ------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILAK--------PT-----------------HDTIVRL 255 (306)
Q Consensus 209 ------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~~~--------~~-----------------~~~~lRi 255 (306)
....+.|.++.|++... ......|++.|.=- ++-.+ |. .++.||+
T Consensus 329 ~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~ 406 (427)
T PRK07049 329 YGAVYKRQCTGAGSTFSFDIKGG--QAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRL 406 (427)
T ss_pred cHHHHHhhCCCCccEEEEEEcCC--HHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEE
Confidence 11235688889988631 23344565555321 21111 10 2468999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHh
Q 021893 256 TPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 256 ~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++. -||.+.+++-|+++|+
T Consensus 407 svG----lE~~~dl~~dl~~al~ 425 (427)
T PRK07049 407 SIG----IEHPDDLIADLAQALD 425 (427)
T ss_pred EeC----cCCHHHHHHHHHHHHh
Confidence 943 3667778888887776
No 259
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.66 E-value=3e-15 Score=134.99 Aligned_cols=213 Identities=15% Similarity=0.155 Sum_probs=134.6
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWE 118 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~ 118 (306)
..++..|++.++++++ +++++|+++.++|+++...+ +++|.++|+++|+++|+||+|. ++ .... . ..
T Consensus 119 ~~vd~~d~~~l~~~i~---~~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~--~~~p--~-~~ 186 (366)
T PRK08247 119 VYVNTASLKAIEQAIT---PNTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPV--LQRP--L-EE 186 (366)
T ss_pred EEECCCCHHHHHHhcc---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcccc--ccCc--h-hc
Confidence 4556678999999987 47899999998888876655 9999999999999999999995 22 1111 1 12
Q ss_pred CCCCcEEEecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+.+..+.|+||.++| +. ..|+++.+ +++++.+...........++..+..+..+++.+.. ..++.+++.+.+.+
T Consensus 187 g~di~i~S~sK~~~g~~d~-~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~~--r~~~~~~~a~~l~~ 263 (366)
T PRK08247 187 GADIVIHSATKYLGGHNDV-LAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLAL--RMRQHEENAKAIAA 263 (366)
T ss_pred CCcEEEeecceeccCCCce-eeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence 333445589999984 55 78888886 66776665433333444566666666666654432 23455677777777
Q ss_pred HHHHHHhhCCCce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHH----------HCCceeccC----------------
Q 021893 196 HLFKIQQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMK----------ERGILAKPT---------------- 248 (306)
Q Consensus 196 ~L~~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~----------~~Gi~~~~~---------------- 248 (306)
.|++. |.+. ...++.|.++.+.+.. ......|.+.+. .+.+++.|.
T Consensus 264 ~L~~~----p~v~~v~~P~~gg~~sf~~~~---~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~g 336 (366)
T PRK08247 264 FLNEQ----PGVTDVLYPGRGGMLSFRLQD---EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANG 336 (366)
T ss_pred HHHhC----CCeeEEecCCcCcEEEEEECC---HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcC
Confidence 77664 2222 1234457777777642 122223333222 112333332
Q ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|++.. -|+++.+++.|+++++
T Consensus 337 i~~~~~R~svG----lE~~~dl~~dl~~al~ 363 (366)
T PRK08247 337 VCNRLLRFSVG----IENVEDLIADLKQAFK 363 (366)
T ss_pred CCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2468999843 3667778888888876
No 260
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.64 E-value=4.8e-14 Score=129.60 Aligned_cols=216 Identities=16% Similarity=0.169 Sum_probs=136.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccccccc-ccccccCCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGR-MLASDWEEVRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~-~~~~~~~~~~~ 122 (306)
.|+++++++++++ +++++++... +.|...+ +++|.++|++||+++|+|++|. |+...|. ..... +.+.
T Consensus 152 ~d~~~l~~~i~~~--~~k~v~~~~~--~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di 221 (416)
T PRK00011 152 IDYDEVEKLALEH--KPKLIIAGAS--AYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADV 221 (416)
T ss_pred cCHHHHHHHHHhc--CCCEEEECCC--cCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcE
Confidence 4799999999753 5677777532 3344556 9999999999999999999986 4322221 11111 2222
Q ss_pred cEEEecccccCCcccceeeEeC-HHHHhhcCCCCccCCCCC-CHHHHHHHHHHH-HHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGSTFGG-NPLASAVAIASL-DVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~aa~~al-~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
-+.|++|++ +|. +.|+++++ +++++.+........+.. ....++++..++ +...+ ++..++++++++++++.|
T Consensus 222 ~~~S~~K~l-~g~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 222 VTTTTHKTL-RGP-RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred EEecCCcCC-CCC-CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 244788998 456 88889885 688777654322222222 222333333333 32221 346778888888888888
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C------CCCEEEEeCCC----CCCH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T------HDTIVRLTPPL----SISS 263 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------~~~~lRi~~~~----~~t~ 263 (306)
++.+.. +......+.++++.+++. ..+..++.+.|.++||.+.. . .++.+|++... ..++
T Consensus 300 ~~~g~~----~~~~~~~~~~~~i~~~~~--~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~ 373 (416)
T PRK00011 300 AERGFR----VVSGGTDNHLVLVDLRSK--GLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKE 373 (416)
T ss_pred HhCCCe----eeecCCCCeEEEEeCccc--CCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCH
Confidence 875311 111112346667766531 22456788999999999973 1 24568986432 4679
Q ss_pred HHHHHHHHHHHHHHh
Q 021893 264 NELQEGSKALHDVLE 278 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~ 278 (306)
+|++.+++.|++++.
T Consensus 374 ~di~~l~~~l~~~~~ 388 (416)
T PRK00011 374 AEMKEIAELIADVLD 388 (416)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998887
No 261
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.64 E-value=3.1e-14 Score=132.03 Aligned_cols=207 Identities=22% Similarity=0.270 Sum_probs=132.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE--ehhhhcccccccccccccCCCCCc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA--DEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~--De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
|+++++++++ +++++|+++++ +++|.+.+ +++|.++|+++|+++++ |.+..|. ..... ....|
T Consensus 193 d~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~-----~~~~~--~~~~D 257 (447)
T PRK00451 193 DLEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL-----LKPPG--EYGAD 257 (447)
T ss_pred CHHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc-----CCCcc--cCCCC
Confidence 7899999887 57888888887 77898877 99999999999999998 5443222 11112 23456
Q ss_pred EE-----Eeccccc-CCcccceeeEeCHHHHhhcCCC--------------------------CccCCC--CCCH-HHHH
Q 021893 124 MV-----ILGKALG-GGVIPVSAVLADKEVMLCIQPG--------------------------EHGSTF--GGNP-LASA 168 (306)
Q Consensus 124 ~~-----s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~--------------------------~~~~~~--~~~~-~~~~ 168 (306)
++ ++||.+. +|+ ++||+++++++++.+.+. ....+. +.+. +...
T Consensus 258 ~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNAL 336 (447)
T ss_pred EEEECCCcCCCCCCCCCC-CchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHH
Confidence 65 3456655 788 999999999988875221 000111 1111 1112
Q ss_pred HHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee
Q 021893 169 VAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 245 (306)
Q Consensus 169 aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~ 245 (306)
++..+++.+.+ ++..+++.+++++++++|+++. +.. +.....+..+.+.- +.+..+++++|.++|+.+
T Consensus 337 aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~----g~~--~~~~~~~~~~~v~~---~~~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 337 AAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIG----GVE--LFDGPFFNEFVVRL---PKPAEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcC----CEE--ecCCCeEEEEEEec---CCCHHHHHHHHHhcCCCC
Confidence 33334444433 3456777788888888887752 111 11212222211221 124678999999998774
Q ss_pred c----c---CCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 246 K----P---THDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 246 ~----~---~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
. + ...+.+|++++..+|+++++++++.|++++
T Consensus 408 ~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 408 GYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 3 1 124689999988899999999999998765
No 262
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.64 E-value=5.5e-15 Score=134.71 Aligned_cols=219 Identities=15% Similarity=0.134 Sum_probs=141.5
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhccccccccccccc
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDW 117 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~ 117 (306)
.+++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++ |+++|+||+|... ..+... .
T Consensus 132 ~~vd~~d~e~l~~~i~---~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~-~~~~~l---~ 200 (400)
T PRK06234 132 TFVDTSNLEEVRNALK---ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTP-YIQRPL---Q 200 (400)
T ss_pred EEECCCCHHHHHHHhc---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCch-hcCCch---h
Confidence 5566678999999997 57899999999999999888 99999999997 9999999999732 111111 1
Q ss_pred CCCCCcEEEecccccC-Cccc-ceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 118 EEVRPDMVILGKALGG-GVIP-VSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~~-G~~~-~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
++.+..+.|++|.++| |. + .||+++++++++.++.. ....+...++.....+...++.+.. ..++..++...+
T Consensus 201 ~g~Divv~S~sK~l~g~g~-~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl~~--r~~~~~~na~~~ 277 (400)
T PRK06234 201 LGADVVVHSATKYLNGHGD-VIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQI--RMEKHCKNAMKV 277 (400)
T ss_pred hCCcEEEeeccccccCCCC-ceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHH
Confidence 1333334488899984 76 5 48999999888877532 1122344566666666666654432 345556677777
Q ss_pred HHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------------
Q 021893 194 RQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------ 248 (306)
Q Consensus 194 ~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------ 248 (306)
.+.|+.... .+|+. .....+.|.++.|.+... ......|.+.|.--++.++-+
T Consensus 278 a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~ 355 (400)
T PRK06234 278 AKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG--VEEGKVVMNNVKLATLAVSLGDAETLIQHPASM 355 (400)
T ss_pred HHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc--HHHHHHHHHhCCcceEeccCCCCCceecCCccC
Confidence 777765321 11110 011235678888888631 233456766665443332211
Q ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|++..+ ||.+.+++.|+++++
T Consensus 356 ~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 396 (400)
T PRK06234 356 THSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALD 396 (400)
T ss_pred CCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 24789999543 566777777777776
No 263
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.64 E-value=8.6e-15 Score=133.54 Aligned_cols=232 Identities=16% Similarity=0.150 Sum_probs=142.8
Q ss_pred CHHHHHHHHHhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----c------cccccccc
Q 021893 46 DITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----L------ARSGRMLA 114 (306)
Q Consensus 46 d~~~le~~i~~~-~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~------~~~g~~~~ 114 (306)
|++.||+.|+++ .+++++|+++.++|++|..+.+.+.+++|.++|++||++||+|+++.. | ++.+..+
T Consensus 137 D~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si- 215 (431)
T cd00617 137 DVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI- 215 (431)
T ss_pred CHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH-
Confidence 899999999864 245888999888887744667899999999999999999999999751 1 1111111
Q ss_pred cccCCCCCcEEEeccccc-CCc----cc-ceeeEeCH-HHHhhcCCCC----ccCCCCC-CHHHHHHHHHHHHHHhhccH
Q 021893 115 SDWEEVRPDMVILGKALG-GGV----IP-VSAVLADK-EVMLCIQPGE----HGSTFGG-NPLASAVAIASLDVIRDEKL 182 (306)
Q Consensus 115 ~~~~~~~~d~~s~sK~~~-~G~----~~-~g~~~~~~-~~~~~~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~~~~ 182 (306)
.++...+.++||.+. .|+ .+ .||+++++ +++++++... ...++.+ +.....+...+++...+.+.
T Consensus 216 ---~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~ 292 (431)
T cd00617 216 ---AEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDY 292 (431)
T ss_pred ---HHHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHH
Confidence 011112233333333 222 02 33688875 5888776321 1112222 22333333335554322233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHC-CceeccC--------
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKER-GILAKPT-------- 248 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~-Gi~~~~~-------- 248 (306)
.++..+.++++.+.|++.+ +....+..|++++++...-. ....+.+|+..|+++ ||.+...
T Consensus 293 l~~~~~~r~~l~~~L~~~G-----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~ 367 (431)
T cd00617 293 LRHRVEQVRYLGDRLDEAG-----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD 367 (431)
T ss_pred HHHHHHHHHHHHHHHHHCC-----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence 4444445577878888774 33345667788888866310 012477888777655 7875421
Q ss_pred ---------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893 249 ---------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP 287 (306)
Q Consensus 249 ---------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~ 287 (306)
.-..+|+..+. ..|.++++.+.++|..+++ .-..+++-
T Consensus 368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~-~~~~~~~~ 415 (431)
T cd00617 368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYE-RREDIRGL 415 (431)
T ss_pred CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHh-hHhhCCCe
Confidence 13689999875 6699999999999999988 55544433
No 264
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.64 E-value=5.6e-15 Score=134.34 Aligned_cols=222 Identities=13% Similarity=0.110 Sum_probs=143.2
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++..|++.++++|+ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.+. .... . .++
T Consensus 132 ~~vd~~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~~-~~~~--l-~~~ 200 (398)
T PRK08249 132 TLCETGDHEQIEAEIA---KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATPI-NQNP--L-ALG 200 (398)
T ss_pred EEcCCCCHHHHHHhcC---CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCccc-cCCc--h-hhC
Confidence 4455678999999997 57899999999999999988 9999999999999999999998321 1111 1 122
Q ss_pred CCCcEEEecccccC-Ccccc-eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 120 ~~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L 197 (306)
.+..+.|++|.++| |- ++ |++++++++++.++..........++..+..+...++.+.. ..++..++.+.+.+.|
T Consensus 201 ~Divv~S~sK~l~g~~~-~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L 277 (398)
T PRK08249 201 ADLVIHSATKFLSGHAD-ALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTLKL--RVRQQQESAMALAKYL 277 (398)
T ss_pred CCEEeccCceecCCCCC-ceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchHHH--HHHHHHHHHHHHHHHH
Confidence 23334478899985 54 44 67777888887776543434445667777777777766643 2456667777777777
Q ss_pred HHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC------
Q 021893 198 FKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT------ 248 (306)
Q Consensus 198 ~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~------ 248 (306)
++.. -.+|+.. ....+.|.++.|++... ......|++.|. ..++-.+ |.
T Consensus 278 ~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~ 355 (398)
T PRK08249 278 QTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGG--MDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVE 355 (398)
T ss_pred HcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCC--HHHHHHHHHhCCcceEccCCCCCCceeeCCccccccc
Confidence 7532 1112110 12245688889988631 223445555553 2222111 10
Q ss_pred -----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 249 -----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 249 -----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.++.+|++.. -||.+.+++.|+++++ .++
T Consensus 356 ~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~-~~~ 395 (398)
T PRK08249 356 NTLEERAALGIPEGLVRISVG----IEDTEDLIADLEQAFA-HLE 395 (398)
T ss_pred CCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH-Hhh
Confidence 2478999944 3567777888887777 543
No 265
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=1.4e-14 Score=134.14 Aligned_cols=216 Identities=18% Similarity=0.182 Sum_probs=140.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|+++++++ +++++++. ++.+|...+ +++|.++|+++|+++++|++|+ |....+ .+..+.. ..|+
T Consensus 170 d~~~L~~~l~~~--~~~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~-~~~~~~~--~~D~ 238 (452)
T PTZ00094 170 DYDKLEELAKAF--RPKLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAG-VLPSPFP--YADV 238 (452)
T ss_pred CHHHHHHHHHHh--CCCEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCC-CCCCCCC--CCcE
Confidence 899999999753 34555552 345788888 9999999999999999999998 431111 1111212 4676
Q ss_pred EEe--cccccCCcccceeeEeCHHHHhhcCCC----Cc-cCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH
Q 021893 125 VIL--GKALGGGVIPVSAVLADKEVMLCIQPG----EH-GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELR 194 (306)
Q Consensus 125 ~s~--sK~~~~G~~~~g~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~ 194 (306)
+++ .|+++|.. + |++++++++.+.+.+. .. ....+.+....++..++++.+.. +++.+++.++.++++
T Consensus 239 l~~S~hK~l~GP~-G-g~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~ 316 (452)
T PTZ00094 239 VTTTTHKSLRGPR-S-GLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALA 316 (452)
T ss_pred EEcCCccCCCCCC-c-eEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 654 49997654 4 6677766543322111 11 11113456677777788888854 346788888889988
Q ss_pred HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----CCCEEEEeCCCCCC---
Q 021893 195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----HDTIVRLTPPLSIS--- 262 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lRi~~~~~~t--- 262 (306)
+.|.+.+.. +...........+.+.. .+.+..++...|.++||.+.. + .+++||++++..++
T Consensus 317 ~~L~~~g~~----v~~~~~~~~~~~v~~~~--~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~ 390 (452)
T PTZ00094 317 AALEKRGYD----LVTGGTDNHLVLVDLRP--FGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGA 390 (452)
T ss_pred HHHHhCCcE----EecCCCCCceEeecCCc--CCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCC
Confidence 888774211 11101112233433432 134567788888778999952 1 24789999977766
Q ss_pred -HHHHHHHHHHHHHHHhhhc
Q 021893 263 -SNELQEGSKALHDVLELDL 281 (306)
Q Consensus 263 -~~~i~~~~~~l~~~l~~~~ 281 (306)
++|++.+++.|.+++. ..
T Consensus 391 ~~~di~~l~~~l~~~~~-~~ 409 (452)
T PTZ00094 391 KEKDFKFVADFLDRAVK-LA 409 (452)
T ss_pred CHHHHHHHHHHHHHHHH-HH
Confidence 9999999999999987 53
No 266
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.63 E-value=3.7e-15 Score=135.41 Aligned_cols=220 Identities=15% Similarity=0.141 Sum_probs=135.5
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++.+|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|+++... ....++ ..
T Consensus 128 v~~vd~~d~~~l~~~i~---~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~-~~~~pl---~~ 196 (390)
T PRK08133 128 TTFVDLTDLDAWRAAVR---PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTP-ALQQPL---KL 196 (390)
T ss_pred EEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCccc-ccCCch---hh
Confidence 45667778999999987 57999999999999999888 999999999999999999998621 011111 12
Q ss_pred CCCCcEEEecccccC-Ccccc-eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH 196 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~ 196 (306)
+.+..+.|++|.++| |. ++ |+++.+++.++.+...........++..+..++..++.+.. ..++..++...+.+.
T Consensus 197 g~Divv~S~sK~~~g~g~-~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl~~--R~~~~~~~a~~la~~ 273 (390)
T PRK08133 197 GADVVIHSATKYLDGQGR-VLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETLSL--RMEAHSANALALAEW 273 (390)
T ss_pred CCcEEEeecceeecCCcc-eEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHH
Confidence 322334478899984 76 76 56777877766554322223333455555555555544433 234455666666666
Q ss_pred HHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC-----
Q 021893 197 LFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT----- 248 (306)
Q Consensus 197 L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~----- 248 (306)
|++... .+|+.. ....+.|.++.|++... ......|.+.|. ..++-.+ |.
T Consensus 274 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~--~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~ 351 (390)
T PRK08133 274 LEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG--REAAWRVIDATRLISITANLGDTKTTITHPATTTHG 351 (390)
T ss_pred HHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC--HHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcc
Confidence 665421 111100 02346688899988531 223445555543 2221111 10
Q ss_pred ------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++.. -|+.+.+++-|+++|+
T Consensus 352 ~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~ 389 (390)
T PRK08133 352 RLSPEARAAAGITEGLIRVAVG----LEDVADIKADLARGLA 389 (390)
T ss_pred cCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHHhh
Confidence 2578999944 3567778888877765
No 267
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.63 E-value=4.3e-15 Score=134.66 Aligned_cols=216 Identities=16% Similarity=0.194 Sum_probs=137.9
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++.+|++++++.++ +++++|+++.++|++|...+ +++|.++|+++|+++|+|++|+... ... ..
T Consensus 121 v~~v~~~d~~~l~~~i~---~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~-~~~-----pl 187 (380)
T TIGR01325 121 VSFVDPTDLNAWEAAVK---PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPV-LQQ-----PL 187 (380)
T ss_pred EEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccc-cCC-----ch
Confidence 45667778999998886 57899999999999999888 9999999999999999999997321 111 11
Q ss_pred CCCCcEE--EecccccC-Ccccc-eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 119 EVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 119 ~~~~d~~--s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
...+|++ |++|.++| |. ++ |++++++++++.++..........++..+..+...++.+.. ..++..++++.+.
T Consensus 188 ~~g~Divv~S~sK~l~g~g~-~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la 264 (380)
T TIGR01325 188 KLGADVVVYSATKHIDGQGR-VMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETLSL--RMQKQFDSALAIA 264 (380)
T ss_pred hhCCCEEEeeccceecCCCC-eEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHH
Confidence 2345655 78899985 66 55 67888888877766432222333445555555555555543 2556666777777
Q ss_pred HHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Ccee--------ccC---
Q 021893 195 QHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILA--------KPT--- 248 (306)
Q Consensus 195 ~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~~--------~~~--- 248 (306)
+.|++... .+|... ....+.|.++.|.+.. ......|.+.|.=- +.-. .|.
T Consensus 265 ~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~---~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~ 341 (380)
T TIGR01325 265 EWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD---RAAAWKVLDAVELVSITNNLGDAKSTITHPATTT 341 (380)
T ss_pred HHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---HHHHHHHHHcCCcceEcccCCCCCeeeeCCCccC
Confidence 77776421 122110 1123568888998862 33455666655322 2111 110
Q ss_pred --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.||++.. -||.+.+++.|++++
T Consensus 342 ~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al 380 (380)
T TIGR01325 342 HGRMQPEERAAAGIGDGLVRLSVG----LEDVDDLIADLKRAL 380 (380)
T ss_pred cccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHhhC
Confidence 2478999944 356677777776653
No 268
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.63 E-value=3e-14 Score=128.35 Aligned_cols=211 Identities=14% Similarity=0.183 Sum_probs=132.8
Q ss_pred CCHHHHHHHHHhcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~-v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
.|++++|++|+ ++|++++ ++.+++++|...+ +++|.++|++||+++|+|++|+.- .. ....++ .|
T Consensus 136 ~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~~~---~~--~~~~~g--~D 201 (363)
T TIGR01437 136 CSAEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAEED---LQ--KYYRLG--AD 201 (363)
T ss_pred CCHHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCCCc---hH--HHHHcC--CC
Confidence 58999999998 4666655 5666777887888 999999999999999999999711 11 011223 46
Q ss_pred EE--EecccccCCcccceeeEeCHHHHhhcCCCCccC--CCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--TFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
++ |++|.++ |+ +.|+++.++++++.++...+.. .+......+++..++++.+.+ .+..+...++.+.++++|
T Consensus 202 ~~~~S~~K~l~-gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L 279 (363)
T TIGR01437 202 LVIYSGAKAIE-GP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEAL 279 (363)
T ss_pred EEEEeCCcccC-CC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHH
Confidence 55 5569885 55 7888888888887664322111 111122334555556666544 223334444555677777
Q ss_pred HHHHhhCCCceeeEE--Eeee---EEEEEEecCCChhhHHHHHHHHHHCC--ceecc--CCCCEEEEeCCCCCCHHHHHH
Q 021893 198 FKIQQQFPNYVKEVR--GRGL---FNAVEFDKTALPVSAYDICLKMKERG--ILAKP--THDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~--~~g~---~~~i~~~~~~~~~~~~~~~~~l~~~G--i~~~~--~~~~~lRi~~~~~~t~~~i~~ 268 (306)
+++. ++....+ ..+. ...+.+.....+.+..++.+.|.++| |.+++ ...+.+|+.+.. ++++|++.
T Consensus 280 ~~i~----g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~ 354 (363)
T TIGR01437 280 NTLK----GVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDI 354 (363)
T ss_pred hcCC----CeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHH
Confidence 7652 1211111 1111 12233332112456889999999877 66664 357789999875 56999999
Q ss_pred HHHHHHHH
Q 021893 269 GSKALHDV 276 (306)
Q Consensus 269 ~~~~l~~~ 276 (306)
++++|+++
T Consensus 355 ~~~~l~~~ 362 (363)
T TIGR01437 355 IVERIREI 362 (363)
T ss_pred HHHHHHHh
Confidence 99999875
No 269
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.62 E-value=1.4e-13 Score=128.31 Aligned_cols=222 Identities=17% Similarity=0.156 Sum_probs=145.0
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|+++++ +++++|+++.++ ++|.+ .+-+++|.++|+++|+++++|+++. .+..|. .... .+..|+
T Consensus 196 ~D~e~L~~~i~---~~t~~V~v~~Pn-~tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~-~~~~--~~GaD~ 264 (481)
T PRK04366 196 VDLEALKAAVG---EDTAALMLTNPN-TLGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILGK-ARPG--DMGFDV 264 (481)
T ss_pred cCHHHHHhhcc---cCCeEEEEeCCC-Ccccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhccc-CCcc--ccCCCE
Confidence 47899999887 468888887665 67754 1229999999999999999999985 111222 1122 234576
Q ss_pred EEe--ccccc-----CCcccceeeEeCHHHHhhcCCCC-------------------ccCCCCCCHHHHHHHHHHHHHHh
Q 021893 125 VIL--GKALG-----GGVIPVSAVLADKEVMLCIQPGE-------------------HGSTFGGNPLASAVAIASLDVIR 178 (306)
Q Consensus 125 ~s~--sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~aa~~al~~~~ 178 (306)
+++ .|+++ ||. .+|++++++++.+.+.+.. ..-.++++.+.+.++...+..+.
T Consensus 265 ~~~~~hK~l~~P~g~Ggp-~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G 343 (481)
T PRK04366 265 VHLNLHKTFSTPHGGGGP-GSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG 343 (481)
T ss_pred EEEechhhcCCCCCCCCC-CeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHH
Confidence 644 49887 455 6788888888776653210 01112234456666666666666
Q ss_pred hccH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec-CCChhhHHHHHHHHHHCCceecc----C-C
Q 021893 179 DEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICLKMKERGILAKP----T-H 249 (306)
Q Consensus 179 ~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~~l~~~Gi~~~~----~-~ 249 (306)
.+++ .++...+.++++++|+++ .. ........ ....+.... ...+.+..++.+.|.++|+.+.. . .
T Consensus 344 ~~Gl~~~a~~~~~~a~~l~~~L~~~-~~---~~~~~~~~-~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~ 418 (481)
T PRK04366 344 AEGLREVSEDAVLNANYLKARLKDI-YD---LPYDRPCM-HEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIV 418 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhh-Cc---ccCCCCee-EEEEEECccccccCCCHHHHHHHHHHCCccCCcccccccc
Confidence 5543 455677788999999887 22 22111110 111222110 00124678899999999998762 1 2
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893 250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM 284 (306)
Q Consensus 250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~ 284 (306)
.+.+|+++...+|++||+.+++.|+++.+ +..+.
T Consensus 419 ~~~l~is~~e~~t~edid~l~~~l~~i~~-~~~~~ 452 (481)
T PRK04366 419 PEALMIEPTETESKETLDAFIAAMKQIAE-EAKEN 452 (481)
T ss_pred CCeEEEcccCCCCHHHHHHHHHHHHHHHH-HHHhC
Confidence 56899999999999999999999999988 76553
No 270
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.62 E-value=1.1e-13 Score=117.04 Aligned_cols=216 Identities=20% Similarity=0.255 Sum_probs=163.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc--
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD-- 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d-- 123 (306)
++.++++.++ +++++|++++++..||...+ +.+|..+++++|+++++|-+|+ .|. ++.+......|
T Consensus 155 ~P~~~~~~~~---dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs----aGa-vp~~Lh~~gaDfa 222 (407)
T COG3844 155 APRALEEAIT---DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS----AGA-VPVDLHAAGADFA 222 (407)
T ss_pred ChHHHHHhhc---cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc----cCC-cceeecccCCCee
Confidence 5668888888 68999999999999999999 9999999999999999999998 222 22343334445
Q ss_pred EEEecccccCCcccceeeEeCHHHHhhcCCC--------------------CccCCC---CCCHHHHHHHHHHHHHHhh-
Q 021893 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPG--------------------EHGSTF---GGNPLASAVAIASLDVIRD- 179 (306)
Q Consensus 124 ~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~--------------------~~~~~~---~~~~~~~~aa~~al~~~~~- 179 (306)
+.|.-|.+.||....+++.+.++..+...+. .....| +.+..++++...+|+...+
T Consensus 223 igcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~ 302 (407)
T COG3844 223 IGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADV 302 (407)
T ss_pred eeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhc
Confidence 4577799997664566777766654443221 111111 2344577777788888765
Q ss_pred --ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-e---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEE
Q 021893 180 --EKLAERSAHLGEELRQHLFKIQQQFPNYVK-E---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 253 (306)
Q Consensus 180 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~l 253 (306)
.+++++.-.+.+++.+.++..+..++ ... . -...|..+.+..+ +..++++.|.++||+..-..++.+
T Consensus 303 ~i~~lR~kSlaLTd~fieLvEa~~~~~~-l~l~tPr~~~~rGsqvS~~hp------~~~~V~qaLi~rGVigD~R~P~vl 375 (407)
T COG3844 303 DITELRKKSLALTDYFIELVEARCEYYG-LTLVTPRAHEERGSQVSLYHP------HGYQVMQALIDRGVIGDFREPDVL 375 (407)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhccccCC-cEEeccchhhhccceeeEecC------cHHHHHHHHHHcCccccccCCCee
Confidence 45778888899999999998887553 222 1 2246777777665 578899999999999998889999
Q ss_pred EEeC-CCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 254 RLTP-PLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 254 Ri~~-~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|+.+ +++++-+|+-.+++.|.++++ ..
T Consensus 376 RfgftPlY~~~~DVw~AV~~L~evL~-t~ 403 (407)
T COG3844 376 RFGFTPLYVSFVDVWDAVDALEEVLD-TL 403 (407)
T ss_pred eecCccceechhHHHHHHHHHHHHHH-hh
Confidence 9999 689999999999999999998 54
No 271
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.62 E-value=6.3e-15 Score=134.15 Aligned_cols=219 Identities=16% Similarity=0.157 Sum_probs=138.5
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+... .... . .++
T Consensus 133 ~~vd~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~~-~~~~--~-~~g 201 (398)
T PRK07504 133 TLVDGLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATPL-FQKP--L-ELG 201 (398)
T ss_pred EEECCCCHHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCccccc-cCCc--h-hhC
Confidence 4445578999999887 57999999999999999988 9999999999999999999997221 1111 1 123
Q ss_pred CCCcEEEeccccc-CCcccce-eeEeCHHHHhh-cCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVS-AVLADKEVMLC-IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~ 196 (306)
.+..+.|++|.++ .|. ++| +++.+++.+.+ ++..........++..++.++.+++.+.. ..++..++...+.+.
T Consensus 202 aDivv~S~sK~l~g~g~-~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl~~--R~~~~~~na~~la~~ 278 (398)
T PRK07504 202 AHIVVYSATKHIDGQGR-CLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETLPV--RVRQQTESAAAIADF 278 (398)
T ss_pred CCEEEeeccccccCCcc-ceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHH
Confidence 3333447789998 487 886 66677765542 33211222334566777777777766644 245556777777777
Q ss_pred HHHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC-----
Q 021893 197 LFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT----- 248 (306)
Q Consensus 197 L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~----- 248 (306)
|++.. ..+|+.. ....+.|.++.|++... ......|++.|.=-.+.++ |.
T Consensus 279 L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~ 356 (398)
T PRK07504 279 LAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG--KEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHK 356 (398)
T ss_pred HHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC--HHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcc
Confidence 77532 1112111 12235688999998531 2334456555532222111 10
Q ss_pred ------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++..+ ||.+.+++.|+++|+
T Consensus 357 ~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 394 (398)
T PRK07504 357 NLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALK 394 (398)
T ss_pred cCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 25789999543 566777777777776
No 272
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.61 E-value=1.4e-14 Score=131.96 Aligned_cols=221 Identities=17% Similarity=0.197 Sum_probs=137.1
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++.+|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.. ....+. ..
T Consensus 137 v~~vd~~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~-~~~~~~---~~ 205 (403)
T PRK07810 137 TVFVDGEDLSQWEEALS---VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATP-LLQRGL---PL 205 (403)
T ss_pred EEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCcc-ccCChh---hc
Confidence 46667779999999997 57899999999999999988 999999999999999999999721 011111 12
Q ss_pred CCCCcEEEecccccC-Ccccc-eeeEeCHHHHh-hcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG-GVIPV-SAVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+.+..+.|++|.++| |. ++ |+++++++.+. .++..........++..+..++.+++.+.. ..++..++...+.+
T Consensus 206 gaDivv~S~tK~l~g~g~-~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl~~--R~~~~~~~a~~~a~ 282 (403)
T PRK07810 206 GADVVVYSGTKHIDGQGR-VLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETLAL--RVRHSNASALRIAE 282 (403)
T ss_pred CCcEEEccCCceecCCcC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence 333333477799985 66 65 67888877554 333221222334567777777777766544 25566666666767
Q ss_pred HHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHC----------CceeccC--
Q 021893 196 HLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKER----------GILAKPT-- 248 (306)
Q Consensus 196 ~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~----------Gi~~~~~-- 248 (306)
.|+.... .+|+.. ....+.|.++.+.+.... .......|++.|.=- .++..|.
T Consensus 283 ~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~ 362 (403)
T PRK07810 283 FLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPATT 362 (403)
T ss_pred HHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCCcc
Confidence 7765421 111000 012256888899886310 012344555543211 1222221
Q ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.+|++.. -|+.+.+++.|++++
T Consensus 363 ~h~~~~~~~~~~~gi~~~lvR~svG----lE~~~dli~dl~~Al 402 (403)
T PRK07810 363 THRAMGPEGRAAIGLGDGVVRLSVG----LEDTDDLIADLDRAL 402 (403)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHhh
Confidence 2468999943 356777777777665
No 273
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.61 E-value=1.8e-13 Score=134.77 Aligned_cols=254 Identities=14% Similarity=0.115 Sum_probs=171.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCccc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVII 77 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~ 77 (306)
+++|+..-+=||...+.....+ ..++.+|. -|+++|+++++.+.+++++|++..+++.+|...
T Consensus 616 r~~vli~~~aH~sn~a~a~~~G------------~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~ 683 (993)
T PLN02414 616 RNVCIIPVSAHGTNPASAAMCG------------MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEE 683 (993)
T ss_pred CCEEEeCCCcCccCHHHHHHCC------------CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccc
Confidence 3567777788887665444322 12233333 289999999997656899999999999999888
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--cccc-----CCcccceeeEeCHHHHhh
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLC 150 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~g~~~~~~~~~~~ 150 (306)
+ +++|.++|+++|+++++|.++. .+.........+..|++.+| |+|+ ||. .+|++.+++.++..
T Consensus 684 ~----I~eI~~iah~~Galv~vDgAq~----~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGP-g~G~l~~~~~L~p~ 754 (993)
T PLN02414 684 G----IDEICDIIHDNGGQVYMDGANM----NAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPF 754 (993)
T ss_pred h----HHHHHHHHHHcCCEEEEEecCH----HhccCcCCccccCCCEEEecCCccCCcCcccCCC-CeeeEEEchhhccc
Confidence 8 9999999999999999999996 12211122234567877664 8776 576 79999999887655
Q ss_pred cCCCC-----------c---cCCC----CCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893 151 IQPGE-----------H---GSTF----GGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVK 209 (306)
Q Consensus 151 ~~~~~-----------~---~~~~----~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~ 209 (306)
+-... . .++. .++.+.+..+...++.+..+++ .++...+..+++++|++.. . ..+
T Consensus 755 lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~-~---~~~ 830 (993)
T PLN02414 755 LPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHY-P---VLF 830 (993)
T ss_pred CCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhC-C---ccc
Confidence 43210 0 0111 1334556666666777766665 6777788889999998732 1 222
Q ss_pred eEEEeee---EEEEEEecCC--ChhhHHHHHHHHHHCCceecc---CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 210 EVRGRGL---FNAVEFDKTA--LPVSAYDICLKMKERGILAKP---THDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 210 ~~~~~g~---~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
..+ .+. -+.+.+...+ .+.+..++++.|.+.|+.... ...+.+|++|.-..+++|||++++++.++.. +.
T Consensus 831 ~~~-~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~-e~ 908 (993)
T PLN02414 831 RGK-NGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRE-EI 908 (993)
T ss_pred cCC-CCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH-HH
Confidence 111 111 1122222111 124568899999998887542 1377899999999999999999999998888 76
Q ss_pred CC
Q 021893 282 PK 283 (306)
Q Consensus 282 ~~ 283 (306)
.+
T Consensus 909 ~~ 910 (993)
T PLN02414 909 AD 910 (993)
T ss_pred HH
Confidence 54
No 274
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.61 E-value=1.5e-14 Score=130.19 Aligned_cols=203 Identities=13% Similarity=0.188 Sum_probs=138.0
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCcc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVI 136 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~ 136 (306)
+++++|.+.+..+.+|.+.| +++| ++++|+++|+|.+++ + .+..+..+ . .|++.+| |.+++--
T Consensus 127 ~~~~lV~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~--g~~~idv~--~--~D~~~~s~~K~lg~~~- 191 (361)
T TIGR01366 127 PGVDVIAWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-A--GGLPVDIA--E--TDVYYFAPQKNFASDG- 191 (361)
T ss_pred CCCCEEEEcccCCccceecc----cccc---cccCCCeEEEEcCcc-c--cCCCCCHH--H--CCEEEEEchhhcCCCC-
Confidence 57999999999999999988 7777 589999999999998 2 11222222 2 4766554 9998432
Q ss_pred cceeeEeCHHHHhhcCCCCc--------------------cCCC-CCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q 021893 137 PVSAVLADKEVMLCIQPGEH--------------------GSTF-GGNPLASAVAIASLDVIRDE----KLAERSAHLGE 191 (306)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~ 191 (306)
.+++++.++++++++.+... ..+. +.+...+.+..++++.+.+. ...++.+++.+
T Consensus 192 Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 192 GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS 271 (361)
T ss_pred ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 45566778988877653211 1112 22333444667888888654 24577778888
Q ss_pred HHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHH
Q 021893 192 ELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNEL 266 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i 266 (306)
++++.+++....-+ ...... .......+.+++ +.+..++.+.|.++||.+.++ ..+.+|++++.++|.+|+
T Consensus 272 ~l~~~l~~~~~~~~-~~~~~~~~s~~v~~v~~~~---g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di 347 (361)
T TIGR01366 272 RLYSWAQERPYATP-FVTDPGKRSQVVGTIDFVD---DIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDV 347 (361)
T ss_pred HHHHHHHhCCCccc-CCCChhhcccceEEEECCC---ccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHH
Confidence 88888888752110 111111 111223344432 467888999999999998765 256899999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 021893 267 QEGSKALHDVLELDL 281 (306)
Q Consensus 267 ~~~~~~l~~~l~~~~ 281 (306)
+.++++|+++++ ++
T Consensus 348 ~~l~~al~~~~~-~~ 361 (361)
T TIGR01366 348 EALTECVDWVVE-RL 361 (361)
T ss_pred HHHHHHHHHHHh-hC
Confidence 999999999887 53
No 275
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=2.4e-14 Score=129.73 Aligned_cols=220 Identities=15% Similarity=0.128 Sum_probs=140.1
Q ss_pred ccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC
Q 021893 42 VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121 (306)
Q Consensus 42 ~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~ 121 (306)
++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+||+|.... .... . .++.+
T Consensus 122 vd~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~-~~~p--l-~~gaD 190 (386)
T PRK08045 122 VDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPA-LQNP--L-ALGAD 190 (386)
T ss_pred eCCCCHHHHHHhcc---cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccc-cCCc--h-hhCCC
Confidence 34458899999887 47899999999999999888 9999999999999999999997321 1111 1 12333
Q ss_pred CcEEEecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF 198 (306)
Q Consensus 122 ~d~~s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~ 198 (306)
..+.|++|.++| +. ..|+++. ++++.+.+.......+.+.+++.+..+..+++.+... .++..++...+.+.|+
T Consensus 191 ivv~S~tK~l~G~~d~-~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl~~R--~~~~~~na~~la~~L~ 267 (386)
T PRK08045 191 LVLHSCTKYLNGHSDV-VAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPR--MELAQRNAQAIVKYLQ 267 (386)
T ss_pred EEEeecceeccCCCCc-eeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccHHHH--HHHHHHHHHHHHHHHH
Confidence 334488899983 55 6787766 5777666653333344456777777777777655432 4566666677777776
Q ss_pred HHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC-------
Q 021893 199 KIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT------- 248 (306)
Q Consensus 199 ~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~------- 248 (306)
.... .+|+.. ....+.|.++.|.+... ......|++.|.=-.+.++ |.
T Consensus 268 ~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~ 345 (386)
T PRK08045 268 TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGM 345 (386)
T ss_pred cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc--HHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccC
Confidence 5321 111110 12346788899988631 2234456655542211111 10
Q ss_pred ----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 249 ----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 249 ----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.++.||++..+ |+.+.+++.|+++++ ...
T Consensus 346 ~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~-~~~ 384 (386)
T PRK08045 346 APEARAAAGISETLLRISTGI----EDGEDLIADLENGFR-AAN 384 (386)
T ss_pred CHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH-Hhh
Confidence 25789999543 567777777777777 543
No 276
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=3.9e-14 Score=129.05 Aligned_cols=182 Identities=16% Similarity=0.178 Sum_probs=120.4
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++..|++.++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|... .. .....
T Consensus 128 ~~v~~~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~----~~--~~pl~ 194 (405)
T PRK08776 128 ITADLTDPRSLADALA---QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSP----AL--QKPLE 194 (405)
T ss_pred EEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCccc----cc--CCccc
Confidence 4455568999999887 47899999999999998877 999999999999999999999731 11 11112
Q ss_pred CCCcEE--EecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 120 VRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
+..|++ |.+|.++| +. ..|+++. ++++.+++........+..+++.+.+....++++.. ..++..++...+.
T Consensus 195 ~gaDivv~S~tK~l~g~~~~-~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~tl~~--r~~~~~~na~~la 271 (405)
T PRK08776 195 FGADLVLHSTTKYINGHSDV-VGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTLDA--RLRVHQENADAIA 271 (405)
T ss_pred ccCCEEEecCceeecCCCCc-eEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCcHHH--HHHHHHHHHHHHH
Confidence 334544 77799983 45 6777766 567766665333333445678888777777776643 4667777777777
Q ss_pred HHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH
Q 021893 195 QHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 239 (306)
Q Consensus 195 ~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~ 239 (306)
+.|++... .+|+. .....+.|.++.|++... ......|.+.|.
T Consensus 272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~ 327 (405)
T PRK08776 272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGG--EAAVRAFVDGLR 327 (405)
T ss_pred HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCC--HHHHHHHHHhCC
Confidence 77776421 11100 012246788999998631 223345555553
No 277
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.58 E-value=3.4e-14 Score=128.29 Aligned_cols=214 Identities=10% Similarity=0.056 Sum_probs=135.3
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
..+.+.+++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+. |..+ ......+|
T Consensus 122 ~~~~e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a~----g~~~--~pl~~gaD 188 (377)
T TIGR01324 122 PLIGEDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWAA----GLLF--KPLEHGVD 188 (377)
T ss_pred CCCHHHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcc----cccc--CccccCce
Confidence 344478888887 57999999999999998887 99999999999999999999972 1111 12233456
Q ss_pred EE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 124 ~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~ 199 (306)
++ |++|.++| +. ..|+++.+++.++.+...........++........+++.+... .++..++...+.+.|++
T Consensus 189 ivv~S~tK~l~G~~d~-~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~R--~~~~~~~a~~la~~L~~ 265 (377)
T TIGR01324 189 ISIQAGTKYLVGHSDI-MIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLGVR--LKQHQESSLAIAKWLSE 265 (377)
T ss_pred EEEecCceeccCCCCc-eEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHHH--HHHHHHHHHHHHHHHHh
Confidence 55 66899984 45 67888888887776653222223344555555555666554332 45556666667777776
Q ss_pred HHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------------------
Q 021893 200 IQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------------ 248 (306)
Q Consensus 200 ~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------ 248 (306)
... .+|.. .....+.|.++.|.+.... ......|.+.|.-.++.++-+
T Consensus 266 ~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~ 344 (377)
T TIGR01324 266 QPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT-QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPN 344 (377)
T ss_pred CCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHH
Confidence 421 11110 0122356888899886311 234556777776543332211
Q ss_pred -----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|++..+ ||.+.+++-|.++++
T Consensus 345 ~~~~~~~~liR~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 345 IKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred HhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence 23578998543 556677777777765
No 278
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.58 E-value=3e-14 Score=129.00 Aligned_cols=216 Identities=16% Similarity=0.136 Sum_probs=137.7
Q ss_pred cCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893 43 DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 43 ~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
+..|++.++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|..+... ..+ ..+.+.
T Consensus 122 d~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~-~pl---~~gaDi 190 (382)
T TIGR02080 122 DQGDEQALRAALA---QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPALQ-NPL---ALGADL 190 (382)
T ss_pred CCCCHHHHHHhcC---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccccC-Cch---hhCCCE
Confidence 3457899999887 46899999999999999888 999999999999999999999732111 111 123333
Q ss_pred cEEEeccccc--CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALG--GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 123 d~~s~sK~~~--~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~ 199 (306)
.+.|++|.++ ++. +.|++.. ++++.+.+.......+.+.+++.+..++..++.+... .++..++...+.+.|+.
T Consensus 191 vv~S~sK~l~G~~~~-~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~tl~~R--~~~~~~na~~~a~~L~~ 267 (382)
T TIGR02080 191 VLHSCTKYLNGHSDV-IAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRTLVAR--MRLQQRNAQAIVEYLQT 267 (382)
T ss_pred EEeecceeccCCCCc-eeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccchHHHH--HHHHHHHHHHHHHHHHh
Confidence 3448889997 366 7888766 5777776654334445556777777777666655443 44555666667777765
Q ss_pred HH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC--------
Q 021893 200 IQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT-------- 248 (306)
Q Consensus 200 ~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~-------- 248 (306)
.. -.+|... ....+.|.++.|++... ......|.+.|.=-.+.++ |.
T Consensus 268 ~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~ 345 (382)
T TIGR02080 268 QPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG--EQTVRRFLGGLSLFTLAESLGGVESLIAHPATMTHAAMG 345 (382)
T ss_pred CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc--HHHHHHHHHcCCcceEeccCCCCcceeECCCccCcccCC
Confidence 32 1111100 12245688899998631 1223455555432111111 10
Q ss_pred ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ---------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++.. -|+.+.+++.|+++++
T Consensus 346 ~~~~~~~gi~~~liRlsvG----lE~~~dl~~dl~~al~ 380 (382)
T TIGR02080 346 PEARAEAGISDTLLRLSVG----LEDADDLIADLEQGLR 380 (382)
T ss_pred HHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2468999944 3567777888877776
No 279
>PRK05968 hypothetical protein; Provisional
Probab=99.58 E-value=4.9e-14 Score=128.03 Aligned_cols=215 Identities=16% Similarity=0.062 Sum_probs=133.7
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++.+|++++++.+. ++++|+++.+.++.+...+ +++|.++|++||+++|+|++|+... ..... .++
T Consensus 131 ~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~~-~~~p~---~~g 198 (389)
T PRK05968 131 DYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASPV-FQRPI---TLG 198 (389)
T ss_pred EEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcchh-ccCch---hcC
Confidence 4456668999998873 5789999988777766655 9999999999999999999997321 11111 123
Q ss_pred CCCcEEEecccccC--CcccceeeEeCHHHHhhcCCCCc-cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALGG--GVIPVSAVLADKEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~ 196 (306)
.+..+.|++|.++| +. +.|+++.+++++++++.... ......++..+..+..+++.+.. ..++..++.+.+.+.
T Consensus 199 ~Divv~S~tK~l~g~~~~-~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl~~--r~~~~~~~a~~la~~ 275 (389)
T PRK05968 199 VDLVIHSASKYLGGHSDT-VAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTLPL--RMKAHEASALEIARR 275 (389)
T ss_pred CcEEEeeccccccCCCCe-EEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcHHH--HHHHHHHHHHHHHHH
Confidence 33334478899984 35 67888889888877653211 11233455666666666654422 244445556666666
Q ss_pred HHHHHhhCCCceee----------EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec---------cC---------
Q 021893 197 LFKIQQQFPNYVKE----------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK---------PT--------- 248 (306)
Q Consensus 197 L~~~~~~~~~~~~~----------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~---------~~--------- 248 (306)
|+..... ..+.. ..+.|.++.|.+.. .....+|++.|...++.++ |.
T Consensus 276 L~~~p~v--~~v~~p~l~~~~~~~~~g~g~~~sf~~~~---~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~ 350 (389)
T PRK05968 276 LKAHPVV--ERVCHPALANHPPAGLSGTSGLFSFIFRE---GIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQ 350 (389)
T ss_pred HHhCCCc--cEEECCCCCCChHHhCCCCceEEEEEECC---HHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCC
Confidence 6654211 01110 11456788888863 3466788888876543322 10
Q ss_pred ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ---------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|+++++.. .+.+++-|+++++
T Consensus 351 ~~~~~~~gi~~~liR~SvGlE~----~~dl~~dl~~al~ 385 (389)
T PRK05968 351 PNSAARFGVSPRSVRLHVGLEG----TEALWADLEQALA 385 (389)
T ss_pred HHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHH
Confidence 1478999976554 4455555555554
No 280
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=9.3e-14 Score=126.18 Aligned_cols=220 Identities=17% Similarity=0.208 Sum_probs=132.7
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++..|++++++.++ +++++|+++.++|++|...+ +++|.++|+++|+++|+|++|+.. ...... . .+
T Consensus 129 ~~~d~~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~-~~~~p~--~-~g 197 (388)
T PRK07811 129 TPVDLSDLDAVRAAIT---PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASP-YLQQPL--A-LG 197 (388)
T ss_pred EEeCCCCHHHHHHhcC---cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCcc-ccCCch--h-hC
Confidence 4455568999999987 47899999999999998888 999999999999999999999732 111111 1 22
Q ss_pred CCCcEEEecccccC-CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 120 ~~~d~~s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L 197 (306)
.+..+.|++|.++| |-.+.|+++++ +++.+.+...........++.....+...++.+.. ..++.+++...+.+.|
T Consensus 198 aDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~tl~~--R~~~~~~na~~la~~L 275 (388)
T PRK07811 198 ADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKTLAV--RMDRHSENAEAVAEFL 275 (388)
T ss_pred CcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHH
Confidence 33334477899985 32167888775 66656554322222233345544444444443322 3455566777777777
Q ss_pred HHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC------
Q 021893 198 FKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT------ 248 (306)
Q Consensus 198 ~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~------ 248 (306)
++... .+|+.. ....+.|.++.|++... ......|.+.|.= .+.-.+ |.
T Consensus 276 ~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~ 353 (388)
T PRK07811 276 AGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG--EEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHAS 353 (388)
T ss_pred HhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC--HHHHHHHHHhCCcceeeccCCCCcceEeCCcccCccc
Confidence 65421 111110 12245688999998631 2334455555432 121111 10
Q ss_pred --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 --------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 --------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||+++.+ ||.+.+++.|++++.
T Consensus 354 ~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 354 TAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred CCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 24689999543 566777777777765
No 281
>PRK14012 cysteine desulfurase; Provisional
Probab=99.57 E-value=3.5e-13 Score=123.43 Aligned_cols=213 Identities=15% Similarity=0.236 Sum_probs=132.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.|+++|+ +++++++++++++++|.+.+ +++|.++|+++|+++|+|++|+ + |.. .++.....+|++
T Consensus 133 d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~---g~~-~~~~~~~~~D~~ 200 (404)
T PRK14012 133 DLEKLEAAMR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-V---GKV-PIDLSKLKVDLM 200 (404)
T ss_pred CHHHHHHhcC---CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-c---CCc-ccCcccCCCCEE
Confidence 7999999997 46889999999999999988 9999999999999999999997 2 211 112223457777
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcCCCCccC-------CCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS-------TFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
++| |.++ .. ++|+++++++....+.+...+. ..+.+.....+..++++.... ++..++.+++.+++.
T Consensus 201 ~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~ 278 (404)
T PRK14012 201 SFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLW 278 (404)
T ss_pred EEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 666 9665 33 6788888766443343321111 112234444444455554432 224556666666666
Q ss_pred HHHHHHHhhCCCceee--EE-Eee--eEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----------------
Q 021893 195 QHLFKIQQQFPNYVKE--VR-GRG--LFNAVEFDKTALPVSAYDICLKMKERGILAK----PT----------------- 248 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~--~~-~~g--~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~----------------- 248 (306)
+.|+++ ++.... .. ... ..+++.+. +..++...|.+.+|..+ +.
T Consensus 279 ~~L~~~----~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (404)
T PRK14012 279 NGIKDI----EEVYLNGDLEQRVPGNLNVSFNYV------EGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDEL 348 (404)
T ss_pred HHHhcC----CCEEEeCCccccCCCEEEEEEeCc------CHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhh
Confidence 666543 212111 01 111 12333322 12356665543332211 21
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 249 HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
..+.||++++..+|++|++++++.|+++++ .+..
T Consensus 349 ~~~~iRls~~~~~t~~dvd~~~~~l~~~~~-~~~~ 382 (404)
T PRK14012 349 AHSSIRFSLGRFTTEEEIDYAIELVRKSIG-KLRE 382 (404)
T ss_pred cCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 137899999999999999999999999988 7643
No 282
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.57 E-value=3.5e-13 Score=113.17 Aligned_cols=220 Identities=16% Similarity=0.133 Sum_probs=158.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
.++.+++.+.+| +++++++.+..++||...+ .++...++|++|+.+|++|.+.+ -.|..|.++.|+++.-..
T Consensus 130 ~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS---lggt~F~mDewgVDvayt 201 (385)
T KOG2862|consen 130 PLEEITEKLSQH--KPKAVFVTHGDSSTGVLQD---LLAISGELCHKHEALLLVDTVAS---LGGTEFEMDEWGVDVAYT 201 (385)
T ss_pred cHHHHHHHHHhc--CCceEEEEecCccccccch---HHHHHHHHhhcCCeEEEEechhh---cCCccceehhhcccEEEe
Confidence 589999999986 7899999999999997654 46777889999999999999987 345778788887655455
Q ss_pred EecccccCCcccceeeEeCHHHHhhcCCCCc-----------------------cCCCCCCHHHHHHHHHHHHHHhhc--
Q 021893 126 ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------------GSTFGGNPLASAVAIASLDVIRDE-- 180 (306)
Q Consensus 126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa~~al~~~~~~-- 180 (306)
...|++++.- +++.+..++..+++++.... ...++.+...+-+..+||..+.++
T Consensus 202 gSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL 280 (385)
T KOG2862|consen 202 GSQKALGAPA-GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGL 280 (385)
T ss_pred cchhhcCCCC-CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHH
Confidence 6669999554 55668888888887764311 011133444555666888877664
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cceec----cCCCCEEE
Q 021893 181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAK----PTHDTIVR 254 (306)
Q Consensus 181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~----~~~~~~lR 254 (306)
+..++.++..++++..|++++.+. ....+....-....+..+. ..+..+++.++..+ ++.+. +..+..+|
T Consensus 281 ~~~~~rH~e~s~~l~~~l~~~GLq~-fv~~e~~rlptvttv~vp~---gvDw~dVv~~~~~~~~vei~gglg~~~gKv~R 356 (385)
T KOG2862|consen 281 ENSWRRHREMSKWLKLSLEALGLQL-FVVDEELRLPTVTTVKVPY---GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFR 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccc-eecChhhccCcceeeecCC---CCCHHHHHHHHHHhcCEEeccccCCCcccEEE
Confidence 457788899999999999986443 1222222333334555554 67788999999999 45444 33578999
Q ss_pred EeCC-CCCCHHHHHHHHHHHHHHHh
Q 021893 255 LTPP-LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 255 i~~~-~~~t~~~i~~~~~~l~~~l~ 278 (306)
|.+. ...+.+.|+..++.|+.++.
T Consensus 357 IGl~gcna~~e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 357 IGLLGCNANVEYIDNVVELLKLALQ 381 (385)
T ss_pred EEEeeccCCcHHHHHHHHHHHHHHh
Confidence 9974 44578889999999998887
No 283
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.57 E-value=9.4e-14 Score=125.90 Aligned_cols=205 Identities=15% Similarity=0.075 Sum_probs=139.1
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe--cccccCCcccc
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALGGGVIPV 138 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~~~~ 138 (306)
+++|.+.++.+.+|.+.+ +++|.+ +++|+++++|.+|+ +| ...+..+ . .|++.+ .|++++.. ++
T Consensus 137 ~~~V~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G--~~pidv~--~--iD~~~~s~~K~l~~P~-G~ 202 (378)
T PRK03080 137 DRDVVFTWNGTTTGVRVP----VARWIG--ADREGLTICDATSA-AF--ALPLDWS--K--LDVYTFSWQKVLGGEG-GH 202 (378)
T ss_pred CCCEEEEecCCccceecc----chhhcc--ccCCCeEEEecccc-cc--cCCCCHH--H--CcEEEEehhhhCCCCC-ce
Confidence 456899999999999999 999998 88999999999998 21 1222222 2 366644 49998877 88
Q ss_pred eeeEeCHHHHhhcCCCCc----------------------cCC-CCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHH
Q 021893 139 SAVLADKEVMLCIQPGEH----------------------GST-FGGNPLASAVAIASLDVIRDE-K---LAERSAHLGE 191 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~ 191 (306)
|+++.+++.++.+.+... ..+ ++.+..++.++.++++.+.+. + +.++.+++.+
T Consensus 203 g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~ 282 (378)
T PRK03080 203 GMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANAS 282 (378)
T ss_pred EEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999998877664210 111 123344555667888888764 3 4567777788
Q ss_pred HHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHH
Q 021893 192 ELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNEL 266 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i 266 (306)
++++.|+++..... ....... .+.++.+.+++.. .....++...|.++|+.++.++ .+.+|++++.+++.+||
T Consensus 283 ~l~~~l~~~~~~~~-~~~~~~~~s~~i~~~~~~~~~-~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di 360 (378)
T PRK03080 283 VLYDWAEKTPWATP-LVADPATRSNTSVTLDFVDAQ-AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADV 360 (378)
T ss_pred HHHHHHHhCCCccc-ccCCccccCccEEEEEcCCch-HHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHH
Confidence 88888876642100 1001111 2345666555200 0123456777878888876532 47899999999999999
Q ss_pred HHHHHHHHHHHhhhcC
Q 021893 267 QEGSKALHDVLELDLP 282 (306)
Q Consensus 267 ~~~~~~l~~~l~~~~~ 282 (306)
+.+++.|+++++ +++
T Consensus 361 ~~l~~al~~~~~-~~~ 375 (378)
T PRK03080 361 EALTPWLDWAFE-RLK 375 (378)
T ss_pred HHHHHHHHHHHH-HHh
Confidence 999999999988 654
No 284
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.57 E-value=1.8e-13 Score=124.85 Aligned_cols=145 Identities=19% Similarity=0.214 Sum_probs=103.7
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++.+|++.++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.. ..+..+ +
T Consensus 133 ~~vd~~d~~~l~~~i~---~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~-~~~~~l-----~ 199 (403)
T PRK07503 133 RHVDLTDPAALKAAIS---DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTP-YLQRPL-----E 199 (403)
T ss_pred EEeCCCCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-ccCCch-----h
Confidence 4556678999999987 47899999999999999888 999999999999999999999732 112211 2
Q ss_pred CCCcE--EEecccccC-C-cccceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 120 VRPDM--VILGKALGG-G-VIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 120 ~~~d~--~s~sK~~~~-G-~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
...|+ .|++|.++| | . +.|+++.+++++++++.. ........+++.+..++..++.+.. ..++..++...+
T Consensus 200 ~g~Di~v~S~tK~l~g~gd~-~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~~ 276 (403)
T PRK07503 200 LGADLVVHSATKYLGGHGDI-TAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLAL--RMDRHCASAQAV 276 (403)
T ss_pred hCCCEEEccccccccCCCce-eEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHHH--HHHHHHHHHHHH
Confidence 33454 478899995 4 5 788888888888877632 2223455677777766666665533 234445666777
Q ss_pred HHHHHHH
Q 021893 194 RQHLFKI 200 (306)
Q Consensus 194 ~~~L~~~ 200 (306)
.+.|+..
T Consensus 277 a~~L~~~ 283 (403)
T PRK07503 277 AEWLARH 283 (403)
T ss_pred HHHHHhC
Confidence 7777653
No 285
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.56 E-value=6.9e-14 Score=127.09 Aligned_cols=219 Identities=15% Similarity=0.135 Sum_probs=138.2
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++.+|++++++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|... ..+.. .
T Consensus 126 ~~~vd~~d~e~l~~~i~---~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~-~~~~~-----~ 192 (391)
T TIGR01328 126 VDFINMAIPEEVKAHIK---DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATP-MLTNP-----V 192 (391)
T ss_pred EEEECCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchh-ccCCc-----h
Confidence 34566678999999887 57899999999999998888 999999999999999999999721 11211 1
Q ss_pred CCCCcE--EEecccccC-CcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 119 EVRPDM--VILGKALGG-GVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 119 ~~~~d~--~s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
+...|+ .|++|.+++ |....|++++++++++.++... ...+...++..+..+...++.+.. ..++.+++...+
T Consensus 193 ~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~~--r~~~~~~na~~l 270 (391)
T TIGR01328 193 ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLNI--RMKRHSENAMKV 270 (391)
T ss_pred hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHHH--HHHHHHHHHHHH
Confidence 233454 478899984 5413577888898887766321 111233455555555555544432 355666777777
Q ss_pred HHHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC--
Q 021893 194 RQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT-- 248 (306)
Q Consensus 194 ~~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~-- 248 (306)
.+.|+.... .+|+.. ...++.|.++.|++... ......|.+.|.= .+.-.+ |.
T Consensus 271 a~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~ 348 (391)
T TIGR01328 271 AEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG--FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASM 348 (391)
T ss_pred HHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC--HHHHHHHHHhCCcceEecCCCCCcccCcCCCcc
Confidence 777776421 111110 12335688889988631 2334455555531 111111 10
Q ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++.. -||.+.+++.|+++++
T Consensus 349 ~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~ 389 (391)
T TIGR01328 349 THAVVPKEEREAAGITDGMIRLSVG----LEDADDLIADLKQALD 389 (391)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHHHh
Confidence 2468999943 3667888888888876
No 286
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=1.2e-13 Score=125.55 Aligned_cols=220 Identities=16% Similarity=0.107 Sum_probs=130.9
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++..+.+++++.++ +++++|+++.++|+++...+ +++|.++|+++|+++|+|++|.. |.. +....
T Consensus 133 ~~vd~~~~~~l~~~i~---~~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a~----~~~--~~~l~ 199 (394)
T PRK07050 133 RFYDPLIGAGIADLIQ---PNTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYSA----GLA--FKPFE 199 (394)
T ss_pred EEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCccc----ccc--cCHHH
Confidence 3344445678888887 57899999999998887666 99999999999999999999972 111 11112
Q ss_pred CCCc--EEEecccccCCc-ccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 120 VRPD--MVILGKALGGGV-IPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 120 ~~~d--~~s~sK~~~~G~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
...| +.|++|.++|+. .+.|+++. +++++++++......+...++.....++..++.+.. -.++..++...+.+
T Consensus 200 ~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl~~--Rl~~~~~~a~~la~ 277 (394)
T PRK07050 200 HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSLQV--RLAAHDRSALEVAE 277 (394)
T ss_pred cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHH
Confidence 2345 448899998532 15776665 677777765433322334444444444333333322 13444455556666
Q ss_pred HHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------------
Q 021893 196 HLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------------- 248 (306)
Q Consensus 196 ~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------- 248 (306)
.|++... .+|.. .....+.|.++.+.+..........+|.+.|...++.++-+
T Consensus 278 ~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~ 357 (394)
T PRK07050 278 WLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASM 357 (394)
T ss_pred HHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCccccc
Confidence 6665321 01100 00123467778888763211245667777777665443321
Q ss_pred -------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++..+ ||.+.+++-|.+++.
T Consensus 358 ~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~ 390 (394)
T PRK07050 358 RTAKWPHRGTLVRLYIGL----EDEADLIADLEQALE 390 (394)
T ss_pred chhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHH
Confidence 13679999543 556666666666665
No 287
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=1e-13 Score=125.28 Aligned_cols=217 Identities=11% Similarity=0.082 Sum_probs=135.7
Q ss_pred cccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893 41 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 120 (306)
Q Consensus 41 ~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~ 120 (306)
+++..+.+.++++++ +++++|++|.++|++|.+.+ +++|+++|+++|+++++|++|+. +. .+....+
T Consensus 130 ~v~~~~~e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~----p~--~~~Pl~~ 196 (394)
T PRK09028 130 YYDPMIGEGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWAS----PI--NSRPFEM 196 (394)
T ss_pred EECCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccc----cc--cCCcccc
Confidence 444556788988886 57999999999999998877 99999999999999999999972 11 1233344
Q ss_pred CCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893 121 RPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH 196 (306)
Q Consensus 121 ~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~ 196 (306)
.+|++ |.+|+++| .. -.|+++.++++++.++........+.++..+..+...++.+... .++..++...+.+.
T Consensus 197 GaDivv~S~tK~l~Gh~d~-~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR--~~~~~~na~~la~~ 273 (394)
T PRK09028 197 GVDISIQAATKYIVGHSDV-MLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLGVR--LAQHEKNALKVANW 273 (394)
T ss_pred CceEEEEeCCeEecCCCCE-EEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHH--HHHHHHHHHHHHHH
Confidence 56655 77799984 44 67777777777665553222233345667666666666655432 45556666667777
Q ss_pred HHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC-----
Q 021893 197 LFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT----- 248 (306)
Q Consensus 197 L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~----- 248 (306)
|++... .+|+.. ....+.|.++.|.+.... ......|.+.|.=-.+.++ |.
T Consensus 274 L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~ 352 (394)
T PRK09028 274 LATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD-PKAVTALVEGMQHFKMGFSWGGFESLILGVFGINKL 352 (394)
T ss_pred HhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEecccCCCcceeECCCCcCcc
Confidence 765421 111110 123456888999886311 2334456555531111111 10
Q ss_pred --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 --------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 --------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++..+ ||.+.+++.|.++++
T Consensus 353 ~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~ 386 (394)
T PRK09028 353 RTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFE 386 (394)
T ss_pred CchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 23689999544 455566666666665
No 288
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=5.1e-14 Score=127.34 Aligned_cols=219 Identities=15% Similarity=0.125 Sum_probs=136.6
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWE 118 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~ 118 (306)
..++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|.. +. ....
T Consensus 121 ~~vd~~d~e~l~~~i~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~-------~~pl 186 (388)
T PRK08861 121 QFVDQSDAAALDAALA---KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVL-------QKPL 186 (388)
T ss_pred EEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccccc-------CCCc
Confidence 3344568899998887 57899999999999999998 99999999999999999999972 21 1112
Q ss_pred CCCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 119 EVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 119 ~~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
.+..|++ |.+|.++| +. ..|+++++ +++.+.++..........++.....++..++.+... .++..++...+
T Consensus 187 ~~GaDivv~S~tK~l~G~~d~-~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl~lR--~~~~~~~a~~~ 263 (388)
T PRK08861 187 ELGADFVIHSTTKYINGHSDV-IGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGAR--MRVHEESAQQI 263 (388)
T ss_pred ccCCCEEEeecceeccCCCcc-eeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCHHHH--HHHHHHHHHHH
Confidence 2345554 77799985 34 57777774 566665553333333445666666666666555432 44555666666
Q ss_pred HHHHHHHH----hhCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC--
Q 021893 194 RQHLFKIQ----QQFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT-- 248 (306)
Q Consensus 194 ~~~L~~~~----~~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~-- 248 (306)
.+.|+... ..+|+. .....+.|.++.|++... ......|++.|.= .+.-.+ |.
T Consensus 264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~ 341 (388)
T PRK08861 264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS--FEQLKVFVKALALFSLAESLGGVESLICHPASM 341 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC--HHHHHHHHhcCCcceEccCCCCCcceeeCCCcc
Confidence 66666532 111110 012346788889988631 2234455544432 121111 10
Q ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.++.||+++.+ |+.+.+++.|+++++ .+.
T Consensus 342 ~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~-~~~ 385 (388)
T PRK08861 342 THRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFA-KAA 385 (388)
T ss_pred cccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH-HHH
Confidence 24789999543 566777777777776 543
No 289
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.55 E-value=3.8e-13 Score=120.84 Aligned_cols=208 Identities=16% Similarity=0.189 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|++.+++.++ +++++|++++ ++|...+ +++|.++|+++|+++|+|++|+ |....+. ..+...|
T Consensus 94 ~d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~i~li~D~a~~~g~~~~~~-----~~~~~~d 158 (352)
T cd00616 94 IDPELIEAAIT---PRTKAIIPVH---LYGNPAD----MDAIMAIAKRHGLPVIEDAAQALGATYKGR-----KVGTFGD 158 (352)
T ss_pred cCHHHHHHhcC---cCCeEEEEEC---CCCCcCC----HHHHHHHHHHcCCeEEEECCCCCCCeECCE-----EcccCcc
Confidence 37899998886 5688888764 4677777 9999999999999999999997 3211111 1121234
Q ss_pred EE--Eec--ccccCCcccceeeEeC-HHHHhhcCCCCcc---------------CCCCCCHHHHHHHHHHHHHHhhccHH
Q 021893 124 MV--ILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHG---------------STFGGNPLASAVAIASLDVIRDEKLA 183 (306)
Q Consensus 124 ~~--s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~~~aa~~al~~~~~~~~~ 183 (306)
+. |++ |.+++| ..|+++.+ +++++.++..... ..+..+.+..+.+...++.+ +++.
T Consensus 159 ~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~ 234 (352)
T cd00616 159 AGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEII 234 (352)
T ss_pred eeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHH
Confidence 44 444 999544 45666664 5766654421100 11123344444444444433 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeE---EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------- 249 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------- 249 (306)
++.+++.+++++.|+.+... ...... .....++.+.+.+. ...+..++.+.|.++||.++...
T Consensus 235 ~~~~~~~~~~~~~L~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~ 311 (352)
T cd00616 235 ARRREIAERYKELLADLPGI--RLPDVPPGVKHSYHLYVIRLDPE-AGESRDELIEALKEAGIETRVHYPPLHHQPPYKK 311 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCc--cCCCCCCCCceeeEEEEEEECCc-CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhh
Confidence 77778888888888764211 011111 12344556655421 12467789999999999766210
Q ss_pred ----------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 250 ----------------DTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 250 ----------------~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
.+.+|++++..+|++|++.+++.|+
T Consensus 312 ~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 312 LLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1689999999999999999998874
No 290
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.54 E-value=1.1e-13 Score=125.26 Aligned_cols=219 Identities=12% Similarity=0.105 Sum_probs=137.6
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++..|++.++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|+++... ..... . .+
T Consensus 113 v~~vd~~d~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~-~~~~~--l-~~ 181 (378)
T TIGR01329 113 VVHVDTTDLDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSP-LLCNP--L-EL 181 (378)
T ss_pred EEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc-ccCCh--h-hc
Confidence 35566678999999987 57999999999999999988 999999999999999999998521 11111 1 12
Q ss_pred CCCCcEEEecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+.+..+.|.+|.++| +. ..|+++++ +.+.++++..........++..+..+...++.+.. ..++..++...+.+
T Consensus 182 g~Di~v~S~tK~l~G~~~~-~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl~~--R~e~~~~na~~la~ 258 (378)
T TIGR01329 182 GADIVYHSATKFLAGHSDV-MAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTLAI--RIEKQQENARAIAM 258 (378)
T ss_pred CCcEEEEecceeccCCccc-eeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCHHH--HHHHHHHHHHHHHH
Confidence 333334477899985 34 68888774 55556565433322333445544443444433322 24455555666666
Q ss_pred HHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------------
Q 021893 196 HLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------------- 248 (306)
Q Consensus 196 ~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------- 248 (306)
.|++... .+|... ....+.|.++.|.+.. ...+.+|+..|...++.++.+
T Consensus 259 ~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~---~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~ 335 (378)
T TIGR01329 259 FLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS---VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSH 335 (378)
T ss_pred HHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHhCcCcccccCCCCCCceeeCCCcccc
Confidence 6654221 011000 0123567888888832 233778888886555554421
Q ss_pred -------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|++.. -||.+.+++-|+++++
T Consensus 336 ~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~ 374 (378)
T TIGR01329 336 ASIPAEVREERGLPEDLVRLSVG----IEDVDDLISDLDIAFV 374 (378)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence 2478999943 3667778888888877
No 291
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.54 E-value=1.7e-13 Score=123.30 Aligned_cols=208 Identities=18% Similarity=0.141 Sum_probs=132.8
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++++++++ +++++|+++.++|++|...+ +++|.++|+++|+++|+|+++... . .....+...|+
T Consensus 124 ~d~~~l~~~i~---~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~----~--~~~pl~~gaDi 190 (364)
T PRK07269 124 NTEEELIAAIE---EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSP----I--YQRPIELGADI 190 (364)
T ss_pred CCHHHHHHhcC---cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc----c--cCCchhhCCcE
Confidence 47899999997 57999999999999998888 999999999999999999997521 1 11223445666
Q ss_pred E--EecccccC-CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893 125 V--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 125 ~--s~sK~~~~-G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~ 200 (306)
+ |++|.++| |-.-.|+++. ++++.+.++..........+++.+..+...|+.+.. ..++.+++...+.+.|+..
T Consensus 191 vv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~~--r~~~~~~na~~~a~~L~~~ 268 (364)
T PRK07269 191 VLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLSL--RMERSTANAQEVVAFLKKS 268 (364)
T ss_pred EEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHhC
Confidence 5 66699984 3113556776 466766665322222345577777777766665433 3455566666666666653
Q ss_pred HhhCCCce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC----------CceeccC-----------------CCCE
Q 021893 201 QQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER----------GILAKPT-----------------HDTI 252 (306)
Q Consensus 201 ~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~----------Gi~~~~~-----------------~~~~ 252 (306)
|.+. ...++.|.++.|.+.. ......|.+.+.-- ++++.|. .++.
T Consensus 269 ----p~v~~v~ypg~gg~~sf~~~~---~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~l 341 (364)
T PRK07269 269 ----PAVKEVLYTGKGGMISFKVAD---ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDL 341 (364)
T ss_pred ----CCccEEeCCCcCcEEEEEECC---HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCe
Confidence 2111 1225678888888752 22333444443221 2232231 2578
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 253 VRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 253 lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+|++.. -|+.+.+++-|+++++
T Consensus 342 iRlsvG----lE~~~dli~dl~~al~ 363 (364)
T PRK07269 342 LRLSIG----IEDARDLIADLKQALE 363 (364)
T ss_pred EEEEec----cCCHHHHHHHHHHHhc
Confidence 999943 3567777888877765
No 292
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.54 E-value=7.2e-13 Score=119.82 Aligned_cols=211 Identities=17% Similarity=0.199 Sum_probs=130.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~~d~ 124 (306)
|++++++.++ +++++|+.. +++|...+ +++|.++|++||+++|+|++|+-.. +.|. ..+..-|+
T Consensus 108 d~~~le~~i~---~~tk~Iip~---~~~G~~~d----~~~I~~la~~~~i~vIeDaa~~~g~~~~~~-----~~g~~~~~ 172 (376)
T TIGR02379 108 DETLIESAIT---HRTKAIVPV---HYAGVACD----MDTIMALANKHQLFVIEDAAQGVMSTYKGR-----ALGSIGHL 172 (376)
T ss_pred CHHHHHHhcC---cCceEEEEe---CCCCCccC----HHHHHHHHHHCCCEEEEECccccCCccCCc-----ccCCCCCE
Confidence 7888999887 468887633 34677777 9999999999999999999998221 2222 12333377
Q ss_pred EEec----ccccCCcccceeeEeC-HHHHhhcCCCCc---------------------cCCCCCCHHHHHHHHHHHHHHh
Q 021893 125 VILG----KALGGGVIPVSAVLAD-KEVMLCIQPGEH---------------------GSTFGGNPLASAVAIASLDVIR 178 (306)
Q Consensus 125 ~s~s----K~~~~G~~~~g~~~~~-~~~~~~~~~~~~---------------------~~~~~~~~~~~~aa~~al~~~~ 178 (306)
.+|| |.+.+|. +.|+++.+ +++.+.++.... +..+..+.+.++.+.+.++.+.
T Consensus 173 ~~fSf~~~K~l~~g~-~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~ 251 (376)
T TIGR02379 173 GTFSFHETKNYTSGG-EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD 251 (376)
T ss_pred EEEeCCCCCcCcccC-CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhH
Confidence 7888 9998776 78887765 777776653211 1112234455555555565543
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHh----hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----C-
Q 021893 179 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----H- 249 (306)
Q Consensus 179 ~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~- 249 (306)
. ..++.+++.++..+.|..+.. ..+...........++++.+++ ..+..++.+.|.++||.+++. .
T Consensus 252 ~--~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~r~~l~~~L~~~gI~~~~~~~p~~~ 326 (376)
T TIGR02379 252 R--INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD---EDDRNELIKYLKEQEIMAVFHYVPLHS 326 (376)
T ss_pred H--HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC---cCCHHHHHHHHHHCCCCccccCcCCCc
Confidence 3 455555566666666655321 1111111111122334555543 235678999999999987731 0
Q ss_pred ---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 250 ---------------------DTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 250 ---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
...+.+=++...+++|+++.++.|++++
T Consensus 327 ~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 327 SPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred chhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 1234444445689999999999998765
No 293
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=1.5e-13 Score=124.86 Aligned_cols=217 Identities=13% Similarity=0.091 Sum_probs=127.7
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|..+. .... . .+
T Consensus 120 v~~v~~~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~-~~~~--~-~~ 188 (390)
T PRK08064 120 HTFVDMTNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPL-LQKP--L-DL 188 (390)
T ss_pred EEEECCCCHHHHHHhcC---CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCccc-ccCc--h-hh
Confidence 34556668999998887 57899999999999999988 9999999999999999999987321 1111 1 12
Q ss_pred CCCCcEEEecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+.+..+.|++|.++| |. -.|++++ ++++++.++..........++.....+...++.+.. ..++..++...+.+
T Consensus 189 g~Divv~S~tK~~~G~~~~-laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~tl~~--R~~~~~~~a~~la~ 265 (390)
T PRK08064 189 GADVVLHSATKFLAGHSDV-LAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKTLHV--RLEHSSETANKIAL 265 (390)
T ss_pred CCcEEEeecceeccCCccc-eeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHH
Confidence 333333477899974 33 4566666 467777776543333333344444444444433322 23444555555666
Q ss_pred HHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCce---ec----------c--
Q 021893 196 HLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL---AK----------P-- 247 (306)
Q Consensus 196 ~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~---~~----------~-- 247 (306)
.|++... .+|.. .....+.|.++.|++.. ......|.+. .++. ++ |
T Consensus 266 ~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~---~~~~~~f~~~---l~l~~~~~s~G~~~sl~~~~~~ 339 (390)
T PRK08064 266 YLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS---EEAVRQFVSH---VKLPVFAVSLGAVESILSYPAK 339 (390)
T ss_pred HHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHh---CCcceEcccCCCCcceeECCcc
Confidence 6665321 01100 01234677888888853 2223333333 3431 11 1
Q ss_pred ---------------CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 248 ---------------THDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 248 ---------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
..++.+|+|+.+..+++.++.+.++|++
T Consensus 340 ~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 340 MSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0257899997776655555555555543
No 294
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.54 E-value=1.4e-12 Score=120.90 Aligned_cols=216 Identities=15% Similarity=0.078 Sum_probs=140.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++||++++++ ++++|++. .+.++...+ +++|.++|+++|++|++|++|. |+...+. ...... ..|+
T Consensus 171 D~d~Le~~l~~~--~pklIv~~--~S~~s~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~~~p~~--~~Di 239 (475)
T PLN03226 171 DYDKLEKKAMLF--RPKLIIAG--ASAYPRDWD----YARMRKIADKVGALLMCDMAHISGLVAAQE-AASPFE--YCDV 239 (475)
T ss_pred CHHHHHHHHhhc--CCeEEEEe--cCcCCCccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCC-CCCCCC--CCeE
Confidence 999999999864 45555552 223455666 8999999999999999999998 5422221 111111 3555
Q ss_pred E--EecccccCCcccceeeEeCHHHHh--------------hcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVML--------------CIQPGE-HGSTFGGNPLASAVAIASLDVIRDE---KLAE 184 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~---~~~~ 184 (306)
+ |++|++.|.. + |++++++++.+ ...... .......++..+++..++++.+.+. .+.+
T Consensus 240 v~~t~hK~L~GP~-G-g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~ 317 (475)
T PLN03226 240 VTTTTHKSLRGPR-G-GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQK 317 (475)
T ss_pred EEecCcccccCCC-c-eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 4 6779996543 3 66877775431 111110 1111223455666677889888653 3678
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---------CCCEEEE
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---------HDTIVRL 255 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lRi 255 (306)
++.++.+++++.|++.+.. +........+..+++.. .+.+..++.+.|.+.||.+..+ .+..+|+
T Consensus 318 ~~~~na~~L~~~L~~~G~~----l~~~~t~~hi~lv~~~~--~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRi 391 (475)
T PLN03226 318 QVKANAAALANRLMSKGYK----LVTGGTDNHLVLWDLRP--LGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRI 391 (475)
T ss_pred HHHHHHHHHHHHHHhCCCE----EEcCCCCCCEEEEEccC--CCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCccc
Confidence 8889999999988885322 11111124566666643 1356777888898999988643 3566888
Q ss_pred e----CCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 256 T----PPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 256 ~----~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
. .+...+++|++++.+.|.++++ ..
T Consensus 392 Gt~~lt~~g~~~~d~~~ia~~i~~~~~-~~ 420 (475)
T PLN03226 392 GTPAMTSRGLVEKDFEKVAEFLHRAVT-IA 420 (475)
T ss_pred CcHHHHHCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 3 3467888999999999999998 54
No 295
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.53 E-value=3.5e-13 Score=121.51 Aligned_cols=198 Identities=15% Similarity=0.100 Sum_probs=121.0
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC--Ccc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG--GVI 136 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~--G~~ 136 (306)
+++++|+++.++|++|.+.+ +++|.++|+++|+++++|++|... .+.. ..+ ++.+..+.|++|+++| |.
T Consensus 131 ~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~--~~~~-p~~-~g~Divv~S~sK~l~G~~g~- 201 (366)
T PRK07582 131 AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATP--LGQR-PLE-LGADLVVASDTKALTGHSDL- 201 (366)
T ss_pred cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCc--cccC-chh-cCCcEEEecccccccCCCCe-
Confidence 47899999999999998887 999999999999999999998521 1211 112 2323334478899974 67
Q ss_pred cceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee--
Q 021893 137 PVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK-- 209 (306)
Q Consensus 137 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~-- 209 (306)
++||++. ++++++.++..........+++.+..+...++.+.. ..++..++...+.+.|++... .+|+...
T Consensus 202 ~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p 279 (366)
T PRK07582 202 LLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLGL--RFARQCANALAVAELLAGHPAVRGVRYPGLPGDP 279 (366)
T ss_pred eEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 8999987 477777665433323334456666666555554422 246667788888888886531 1111110
Q ss_pred -------eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec-c------------------CCCCEEEEeCCCCCCH
Q 021893 210 -------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-P------------------THDTIVRLTPPLSISS 263 (306)
Q Consensus 210 -------~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-~------------------~~~~~lRi~~~~~~t~ 263 (306)
...+.|.++.|.+.+ . ++..+.+...++... + ..++.||+++++-..+
T Consensus 280 ~~~~~~~~~~~~gg~~s~~~~~---~---~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~ 353 (366)
T PRK07582 280 AHEVAARQMRRFGGLVSFELAD---A---AAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTD 353 (366)
T ss_pred cHHHHHhhCCCCcceEEEEeCC---H---HHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHH
Confidence 112468888888852 2 233333333344332 0 1246899997766554
Q ss_pred HHHHHHHHHH
Q 021893 264 NELQEGSKAL 273 (306)
Q Consensus 264 ~~i~~~~~~l 273 (306)
+.|+.+.++|
T Consensus 354 dli~dl~~al 363 (366)
T PRK07582 354 DLVADLERAL 363 (366)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 296
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.52 E-value=7.8e-13 Score=113.87 Aligned_cols=94 Identities=19% Similarity=0.247 Sum_probs=77.8
Q ss_pred CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc
Q 021893 37 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116 (306)
Q Consensus 37 ~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~ 116 (306)
..+.++..+|++.++++|+ ++|++|++|..-|+.+.+.+ +++|.++|+++|++||+|++.+. ++.+.
T Consensus 127 i~v~fvd~~d~~~~~~aI~---~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at------pyl~r 193 (426)
T COG2873 127 IEVRFVDPDDPENFEAAID---ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT------PYLCR 193 (426)
T ss_pred cEEEEeCCCCHHHHHHHhC---cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc------ceecc
Confidence 3468888889999999999 68999999999999999999 99999999999999999999862 23355
Q ss_pred cCCCCCcEE--EecccccC-CcccceeeEeC
Q 021893 117 WEEVRPDMV--ILGKALGG-GVIPVSAVLAD 144 (306)
Q Consensus 117 ~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~ 144 (306)
..+...|++ |.+|.++| |- .+|.+++.
T Consensus 194 P~~hGADIVvHS~TK~igGhGt-~iGG~iVD 223 (426)
T COG2873 194 PIEHGADIVVHSATKYIGGHGT-AIGGVIVD 223 (426)
T ss_pred hhhcCCCEEEEeecccccCCcc-ccceEEEe
Confidence 556667766 88899995 66 66655543
No 297
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.52 E-value=1.5e-13 Score=124.55 Aligned_cols=215 Identities=13% Similarity=0.102 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|++++++++++ .++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+ ++.. ... .++.+..
T Consensus 124 ~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~~--~~l---~~GaDiv 192 (385)
T PRK08574 124 PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLLY--RPL---RHGADFV 192 (385)
T ss_pred CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC--Chh---hhCCcEE
Confidence 478899998873 27899999999999999888 9999999999999999999996 3211 111 2343344
Q ss_pred EEEecccccC-CcccceeeE-eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Q 021893 124 MVILGKALGG-GVIPVSAVL-ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 124 ~~s~sK~~~~-G~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+.|++|.++| |-.-.|+++ .++++.+.++......+...+++....++.+++.+.. ..++..++...+.+.|+...
T Consensus 193 v~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p 270 (385)
T PRK08574 193 VHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTLEV--RFERQCRNAMAIAEFLSEHP 270 (385)
T ss_pred EeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHHcCC
Confidence 5588899984 430245344 4677777665433323334456666666666655533 24455556667777776532
Q ss_pred h----hCCCcee---------eE--EEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC--------
Q 021893 202 Q----QFPNYVK---------EV--RGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT-------- 248 (306)
Q Consensus 202 ~----~~~~~~~---------~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~-------- 248 (306)
. .+|+... .. .+.|.++.|++... ......|++.|.= .+.-.+ |.
T Consensus 271 ~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~--~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~ 348 (385)
T PRK08574 271 KVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG--RDAVLKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIP 348 (385)
T ss_pred CcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC--HHHHHHHHHcCCcceEccCCCCCcceeeCCCcCCcccCC
Confidence 1 1111100 11 24688899988631 2334455555531 121111 10
Q ss_pred ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 ---------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.+|++.. -|+.+.+++-|.++++
T Consensus 349 ~~~~~~~gi~~~liR~svG----lE~~~dli~dl~~al~ 383 (385)
T PRK08574 349 EEDRKALGITEDLVRLSVG----LEDVEDLIEDLDQALG 383 (385)
T ss_pred HHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2468999954 3567777787777776
No 298
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=5e-13 Score=122.47 Aligned_cols=245 Identities=17% Similarity=0.175 Sum_probs=142.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+....|+|........ .......+.+++.+|+++++++++ +++++|++++++|++|.+.+
T Consensus 98 d~Vl~~~~~Y~~t~~~~~~~---------l~~~gi~v~~~d~~d~e~le~ai~---~~tklV~lesp~NPtG~v~d---- 161 (425)
T PRK06084 98 DNIVSVAKLYGGTYNLLAHT---------LPRIGIETRFAAHDDIAALEALID---ERTKAVFCESIGNPAGNIID---- 161 (425)
T ss_pred CEEEEeCCCcchHHHHHHHh---------cccceeEEEEECCCCHHHHHHHhc---cCCcEEEEeCCCCCCCeecC----
Confidence 56777777776543221111 001111234566679999999997 46899999999999999888
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEe-CHHH-HhhcCC-C--
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEV-MLCIQP-G-- 154 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~~-~~~~~~-~-- 154 (306)
+++|.++|+++|+++|+|++|+.. .. ........|++ |++|.++| |. ++|.+++ ++.+ ...... .
T Consensus 162 l~~I~~la~~~~i~vVvD~a~a~~-~~-----~~p~~~gaDivv~S~tK~l~G~g~-~~gG~v~~~~~~~~~~~~~~~~~ 234 (425)
T PRK06084 162 IQALADAAHRHGVPLIVDNTVATP-VL-----CRPFEHGADIVVHSLTKYIGGHGT-SIGGIVVDSGKFPWAEHKERFAL 234 (425)
T ss_pred HHHHHHHHHHcCCEEEEECCCccc-cc-----CChhhcCCCEEEECchhccccccc-ceeEEEEeCCccchhhccccccc
Confidence 999999999999999999999721 11 12223345554 78899984 66 7776555 3321 111100 0
Q ss_pred ------------------------------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh--
Q 021893 155 ------------------------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ-- 202 (306)
Q Consensus 155 ------------------------------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~-- 202 (306)
........++..+..++..++.+.. ..++.+++...+.+.|+....
T Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~--R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 235 LNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLAL--RMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred cccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCcc
Confidence 0011223344444444445544433 355666777777777776431
Q ss_pred --hCCCce---------eeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCC--ceec--------cC------------
Q 021893 203 --QFPNYV---------KEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERG--ILAK--------PT------------ 248 (306)
Q Consensus 203 --~~~~~~---------~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~G--i~~~--------~~------------ 248 (306)
.+|+.. ....+ .|.++.|++... ......|.+.|.=-. .-.+ |.
T Consensus 313 ~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~--~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~ 390 (425)
T PRK06084 313 WVKYAGLPDHPEHELARRYMGGKPASILSFGIKGG--QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEEL 390 (425)
T ss_pred EEECCCCCCcccHHHHHHhCCCCcceEEEEEecCC--HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHH
Confidence 111110 11234 578889988631 223445655553111 1111 10
Q ss_pred -----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -----HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++.. -||.+.+++-|+++|.
T Consensus 391 ~~~gi~~~liR~svG----lEd~~dLi~dl~~Al~ 421 (425)
T PRK06084 391 EKAGVSRDMVRLSIG----IEHIDDIIADLAQALD 421 (425)
T ss_pred HhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence 2578999943 3667778888888776
No 299
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=5.4e-13 Score=109.53 Aligned_cols=215 Identities=14% Similarity=0.147 Sum_probs=133.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~~~~~d~ 124 (306)
+.+++.+.++.. ..++.+++..+.|++|.+. ..+.+++|.+.-. +.++++||+|-+|...++. ..... .|++
T Consensus 147 nvdai~evl~~d-s~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~k---YpNL 219 (375)
T KOG0633|consen 147 NVDAIAEVLELD-SKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDFSGVESRMKLVKK---YPNL 219 (375)
T ss_pred cHHHHHHHHhcc-ccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEeeccccccchHhHh---CCce
Confidence 578888888753 4789999999999999776 5667777776654 7999999999987433321 11222 2343
Q ss_pred E---Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893 125 V---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 125 ~---s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L 197 (306)
+ ++||+|| .|+ |+|+.+.+..+.+-+... -..|..+..+..+|++|+..-+- +..++.+.+.+.++...|
T Consensus 220 ivlqTlSKsfGLAGi-RvG~~~~~~~ia~iln~~--KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keL 296 (375)
T KOG0633|consen 220 IVLQTLSKSFGLAGI-RVGYGAFPLSIAEILNRA--KAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKEL 296 (375)
T ss_pred eehhhhhhhcCccee-EeecccccHHHHHHHHhc--cCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 3 8999999 999 999999998877655432 23455555666666666642111 223444444444444444
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKA 272 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~ 272 (306)
.+...-. . +......+++.+.+...+.+.......+.+-..||.++.. -.|++|+.. -++|+-.-+++.
T Consensus 297 t~v~~~~--~-~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitv---Gt~EentvL~k~ 370 (375)
T KOG0633|consen 297 TEVPFLN--D-YPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITV---GTPEENTVLMKC 370 (375)
T ss_pred hcCcccc--C-CCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEc---CCcccchHHHHH
Confidence 4432110 0 1233355666666654221222223344455669999853 468999983 366777888888
Q ss_pred HHHH
Q 021893 273 LHDV 276 (306)
Q Consensus 273 l~~~ 276 (306)
|++.
T Consensus 371 ~K~~ 374 (375)
T KOG0633|consen 371 LKQF 374 (375)
T ss_pred HHhh
Confidence 8765
No 300
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.50 E-value=3.7e-13 Score=121.56 Aligned_cols=219 Identities=11% Similarity=0.038 Sum_probs=134.6
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++..+.+.++++++ +++++|++|.+.|+++.+.+ +++|+++|+++|+++|+|+++... ..+....
T Consensus 132 ~~vd~~~~e~l~~al~---~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p------~~~~pl~ 198 (395)
T PRK05967 132 EYYDPEIGAGIAKLMR---PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP------LYFRPLD 198 (395)
T ss_pred EEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc------eecChhH
Confidence 3444456688998887 57999999999999887777 999999999999999999999732 1123333
Q ss_pred CCCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 120 VRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+.+|++ |.+|.++| .. -+|+++.++++++.+...........++..+......++.+... .++..++...+.+
T Consensus 199 ~GaDivv~S~tKy~~Gh~d~-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl~lR--~~~~~~na~~lA~ 275 (395)
T PRK05967 199 FGVDISIHAATKYPSGHSDI-LLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTMGIR--LEHHRKSALEIAR 275 (395)
T ss_pred cCCCEEEEecccccCCCCCe-eEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccHHHH--HHHHHHHHHHHHH
Confidence 445544 88899984 55 67777778776665543222223345666666666666555432 4455566666666
Q ss_pred HHHHHH----hhCCCce---------eeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHH--CCceec-------c----
Q 021893 196 HLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKE--RGILAK-------P---- 247 (306)
Q Consensus 196 ~L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~--~Gi~~~-------~---- 247 (306)
.|++.. ..+|+.. ....+.|.++.|++.... .......|.+.|.= .++-.+ +
T Consensus 276 ~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~ 355 (395)
T PRK05967 276 WLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLG 355 (395)
T ss_pred HHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCC
Confidence 666542 1111110 122356888899886310 01234455554432 111111 0
Q ss_pred --------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 248 --------THDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 248 --------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..++.+|++..+ ||.+.+++-|+++++
T Consensus 356 ~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~ 390 (395)
T PRK05967 356 DRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFA 390 (395)
T ss_pred hhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 123589999543 566777777777776
No 301
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.1e-12 Score=113.05 Aligned_cols=221 Identities=17% Similarity=0.166 Sum_probs=143.0
Q ss_pred CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893 46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
++++++..|+. |...+.+++.+..++.+|. +.+.++|++|.++|+++|+.|.+|.+.-...-.....+...|....
T Consensus 113 t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~ 191 (342)
T COG2008 113 TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT-VYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYV 191 (342)
T ss_pred CHHHHHHhhcCCCcccCCCceEEEeeccCCCce-ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhC
Confidence 79999998884 2245666666666666664 5689999999999999999999999885321111223334444556
Q ss_pred cEEE--ecccccCCcccce-eeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893 123 DMVI--LGKALGGGVIPVS-AVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~s--~sK~~~~G~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L 197 (306)
|.++ +||+. |. +.| .+.++.+++++++.. ..++.+....+..++...+++..--.....|-++..++|.+.+
T Consensus 192 D~v~~~~tK~g--~~-~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~ 268 (342)
T COG2008 192 DSVSFCLTKGG--GA-PVGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGL 268 (342)
T ss_pred CEEEEecccCC--cc-eeeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh
Confidence 7665 45654 45 666 456799988876532 2333444445555555555543211112233344466666666
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
++. ++.....+...+++.+.+++. ..+...+...+...|++..+.+ ..+|++.+..++++|++.++..+++..
T Consensus 269 ~~~----~G~~~~~~~~tN~vf~~l~~~--~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 269 EAK----PGVKLAFPVETNMVFVRLPES--AIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hhc----CCceeccCCcccEEEEECChH--HHHHHHhhchhheeeeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 643 234444446778888888752 2345556677777788877754 589999999999999999999888754
No 302
>PRK05939 hypothetical protein; Provisional
Probab=99.50 E-value=2.6e-13 Score=123.36 Aligned_cols=94 Identities=16% Similarity=0.250 Sum_probs=71.8
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+. +..+....+
T Consensus 113 v~~v~~~d~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~----~~~~~~~~~ 181 (397)
T PRK05939 113 VTMVDATDVQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTS----PWLFRPKDV 181 (397)
T ss_pred EEEECCCCHHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCccc----ccccCcccc
Confidence 35566678999999997 57999999999999998887 99999999999999999999862 111111122
Q ss_pred CCCCcEEEecccccC-CcccceeeEeC
Q 021893 119 EVRPDMVILGKALGG-GVIPVSAVLAD 144 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~-G~~~~g~~~~~ 144 (306)
+.+..+.|++|.++| |. .+|+++..
T Consensus 182 gaDivv~S~sK~~~g~g~-~igg~v~~ 207 (397)
T PRK05939 182 GASLVINSLSKYIAGHGN-ALGGAVTD 207 (397)
T ss_pred CCEEEEecCeecccCCCC-eEEEEEec
Confidence 333334588899995 77 88877664
No 303
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.50 E-value=6.6e-13 Score=119.38 Aligned_cols=206 Identities=10% Similarity=0.038 Sum_probs=143.2
Q ss_pred HHHH-HHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe
Q 021893 49 ALEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL 127 (306)
Q Consensus 49 ~le~-~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~ 127 (306)
++++ .++ +++++|.+.++.+++|.+.++ +++| +|+++++|.+++ + .+..+..+.+ +.-+.+.
T Consensus 132 ~~~~~~l~---~~~~~V~~th~eTstGv~~~~---i~~i------~g~l~vVDavss-~--g~~~idv~~~--d~~~~ss 194 (360)
T PRK05355 132 PLDEWQLS---DDAAYVHYTSNETIDGTEFHE---LPDT------GDVPLVADMSSD-I--LSRPIDVSKF--GLIYAGA 194 (360)
T ss_pred ChhhccCC---CCCCEEEEccCCCcceEecCc---cccc------CCCcEEEEcCcc-c--cCccCCHHHc--cEEEEec
Confidence 3333 554 468999999999999988621 6655 899999999998 1 2233334433 2223344
Q ss_pred cccccCCcccceeeEeCHHHHhhcCCC-C-----------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q 021893 128 GKALGGGVIPVSAVLADKEVMLCIQPG-E-----------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGE 191 (306)
Q Consensus 128 sK~~~~G~~~~g~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~ 191 (306)
.|.++ .. ++|++++++++++++.+. . ....+++|...+.+..++++.+.++ ++.++.+++.+
T Consensus 195 qK~lg-P~-Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 195 QKNIG-PA-GLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccc-CC-ceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 59986 44 789999999999887662 1 1122456677888888999998765 35678888888
Q ss_pred HHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHH
Q 021893 192 ELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~ 268 (306)
++++.|+++.... ..... ......+.+.++. .....++.+.+.++|+.+.++. .+.+|+|+..++|.+||+.
T Consensus 273 ~l~~~l~~~~~~~--~~~~~~~rs~~v~sf~~~~---~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~ 347 (360)
T PRK05355 273 LLYDAIDSSDFYR--NPVAPEDRSRMNVPFTLAD---EELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQA 347 (360)
T ss_pred HHHHHHHhCCCcc--cCCChhhcCCcEEEEEcCC---hHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHH
Confidence 8888888874110 10111 1233556666654 2334567788899999986553 4789999999999999999
Q ss_pred HHHHHHHHHh
Q 021893 269 GSKALHDVLE 278 (306)
Q Consensus 269 ~~~~l~~~l~ 278 (306)
+++.|+++++
T Consensus 348 l~~~l~~~~~ 357 (360)
T PRK05355 348 LVDFMKEFER 357 (360)
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 304
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.50 E-value=2.3e-13 Score=122.56 Aligned_cols=240 Identities=19% Similarity=0.157 Sum_probs=140.3
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||.....|+|........ +......+.+++..|+++++++++ +++++|++|.+.|++..+++
T Consensus 95 d~iv~~~~~Y~~t~~~~~~~---------l~~~gv~v~~~d~~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~D---- 158 (386)
T PF01053_consen 95 DHIVASDDLYGGTYRLLEEL---------LPRFGVEVTFVDPTDLEALEAALR---PNTKLVFLESPSNPTLEVPD---- 158 (386)
T ss_dssp BEEEEESSSSHHHHHHHHHC---------HHHTTSEEEEESTTSHHHHHHHHC---TTEEEEEEESSBTTTTB-------
T ss_pred CceEecCCccCcchhhhhhh---------hcccCcEEEEeCchhHHHHHhhcc---ccceEEEEEcCCCccccccc----
Confidence 56777777776543221111 111223346777789999999999 58999999999999988888
Q ss_pred HHHHHHHHHHcC-CEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeC--HHHHhhcCCCCc
Q 021893 83 LKAVRDLCSKYN-ILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD--KEVMLCIQPGEH 156 (306)
Q Consensus 83 l~~i~~l~~~~g-i~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~--~~~~~~~~~~~~ 156 (306)
|++|+++|+++| +++++|++.+.. +.++.+....|++ |.+|.++| +-.-.|.++.+ +++++.++....
T Consensus 159 l~~i~~~a~~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~ 232 (386)
T PF01053_consen 159 LEAIAKLAKEHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR 232 (386)
T ss_dssp HHHHHHHHHHTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh
Confidence 999999999998 999999998621 2234444456655 77899983 32145667765 466665543222
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCcee------------------eEEEeeeEE
Q 021893 157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK------------------EVRGRGLFN 218 (306)
Q Consensus 157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~~g~~~ 218 (306)
......++..+......++.+... .++..++...+.+.|++.. .+. ...+.|.++
T Consensus 233 ~~G~~~~p~da~ll~rgl~Tl~~R--~~~~~~nA~~lA~~L~~hp-----~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~ 305 (386)
T PF01053_consen 233 LLGATLSPFDAWLLLRGLRTLPLR--MERQNENAEALAEFLEEHP-----KVKRVYYPGLPSHPQHELAKRQMSGGGGLL 305 (386)
T ss_dssp HHT-B--HHHHHHHHHHHTTHHHH--HHHHHHHHHHHHHHHHTST-----TEEEEEETTSTTSTTHHHHHHHCSSCTSEE
T ss_pred hcCccchHHHHHHHhcCCCcHHHH--HHHHHHHHHHHHHHHHhCC-----CCCeEEEcccccccceeeeeecccccCcee
Confidence 222233445544444455443321 4555566666666666642 222 222556688
Q ss_pred EEEEecCCChh-hHHHHHHHHHHC--Cceec--------cC-----------------CCCEEEEeCCCCCCHHHHHHHH
Q 021893 219 AVEFDKTALPV-SAYDICLKMKER--GILAK--------PT-----------------HDTIVRLTPPLSISSNELQEGS 270 (306)
Q Consensus 219 ~i~~~~~~~~~-~~~~~~~~l~~~--Gi~~~--------~~-----------------~~~~lRi~~~~~~t~~~i~~~~ 270 (306)
.|++.. .. ....|.+.|.=- |.-.+ |. .++.||++.. -||.+.++
T Consensus 306 sf~l~~---~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG----lEd~~dLi 378 (386)
T PF01053_consen 306 SFELKG---GEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG----LEDPDDLI 378 (386)
T ss_dssp EEEESS---HHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE------SS-HHHHH
T ss_pred EEEecc---chhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec----cCCHHHHH
Confidence 999885 32 455666666421 21111 11 2478999943 36778888
Q ss_pred HHHHHHHh
Q 021893 271 KALHDVLE 278 (306)
Q Consensus 271 ~~l~~~l~ 278 (306)
+.|+++++
T Consensus 379 ~Dl~~AL~ 386 (386)
T PF01053_consen 379 ADLEQALE 386 (386)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcC
Confidence 88888764
No 305
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.49 E-value=3.2e-13 Score=122.10 Aligned_cols=217 Identities=14% Similarity=0.124 Sum_probs=131.3
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++..|+++++++++ +++++|+++.++|++|...+ +++|.++|+++|+++|+|++|... ..+... .++
T Consensus 117 ~~v~~~d~~~l~~ai~---~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~-~~~~p~---~~g 185 (377)
T PRK07671 117 TFVDTSNLEEVEEAIR---PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTP-YWQSPI---SLG 185 (377)
T ss_pred EEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCcc-ccCChh---hhC
Confidence 4455668999999997 57899999999999998888 999999999999999999999631 111211 123
Q ss_pred CCCcEEEecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~ 196 (306)
.+..+.|++|.++| +. -.|++++ ++++++.+...........++.....++..++.+.. ..++.+++...+.+.
T Consensus 186 ~Divv~S~sK~l~G~~~~-~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~ 262 (377)
T PRK07671 186 ADIVLHSATKYLGGHSDV-VAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEF 262 (377)
T ss_pred CeEEEecCcccccCCccc-eeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHH
Confidence 22334477899984 22 3455555 567777665433332333455555555555544433 245555666666666
Q ss_pred HHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC-----
Q 021893 197 LFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT----- 248 (306)
Q Consensus 197 L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~----- 248 (306)
|++... .+|... ....+.|.++.|++.. ......|.+.|. ..+.-.+ |.
T Consensus 263 L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~---~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~ 339 (377)
T PRK07671 263 LNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGS---EETANKVLERLQYFTLAESLGAVESLISIPSQMTHA 339 (377)
T ss_pred HHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCC---HHHHHHHHHhCCcceEccCCCCCCeEeECCCccccc
Confidence 665321 111100 1234567888888832 334455555553 1111111 11
Q ss_pred ------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 ------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 ------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.||++.. -||.+.+++-|++++
T Consensus 340 ~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al 376 (377)
T PRK07671 340 SIPADRRKELGITDGLIRISVG----IEDGEDLIEDLAQAL 376 (377)
T ss_pred cCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHh
Confidence 2578999944 356777777777765
No 306
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.49 E-value=2.1e-13 Score=125.04 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=73.3
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+..++.+|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.. . .....
T Consensus 124 v~~v~~~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~~----~--~~~~l 190 (418)
T TIGR01326 124 VRFVDPDDPEEFEKAID---ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFATP----Y--LCRPI 190 (418)
T ss_pred EEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCchh----h--cCCch
Confidence 34556679999999997 47899999999999998888 999999999999999999999621 1 11222
Q ss_pred CCCCcEE--EecccccC-CcccceeeEeCH
Q 021893 119 EVRPDMV--ILGKALGG-GVIPVSAVLADK 145 (306)
Q Consensus 119 ~~~~d~~--s~sK~~~~-G~~~~g~~~~~~ 145 (306)
....|++ |++|.++| |. ++|++++++
T Consensus 191 ~~g~Divv~S~sK~l~g~G~-~lGg~v~~~ 219 (418)
T TIGR01326 191 DHGADIVVHSATKYIGGHGT-AIGGVIVDG 219 (418)
T ss_pred hcCCeEEEECccccccCCcc-ceEEEEEec
Confidence 2345655 88899995 88 999988854
No 307
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.48 E-value=2.4e-12 Score=116.72 Aligned_cols=212 Identities=17% Similarity=0.214 Sum_probs=126.9
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~~d 123 (306)
.|+++++++++ +++++|++.+ ++|...+ +++|.++|++||+++|+|++|+-.. ..|... +...|
T Consensus 107 ~d~~~le~~i~---~~tk~i~~~~---~~G~~~~----~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~-----g~~~~ 171 (375)
T PRK11706 107 IDETLIEAAIT---PKTRAIVPVH---YAGVACE----MDTIMALAKKHNLFVVEDAAQGVMSTYKGRAL-----GTIGH 171 (375)
T ss_pred cCHHHHHHhcC---CCCeEEEEeC---CCCCccC----HHHHHHHHHHcCCEEEEECccccccccCCeee-----ecCcC
Confidence 37899999887 4677777643 4676666 8999999999999999999998221 222211 22237
Q ss_pred EEEec----ccccCCcccceeeEeCHHHHhhcCCCCc---------------------cCCCCCCHHHHHHHHHHHHHHh
Q 021893 124 MVILG----KALGGGVIPVSAVLADKEVMLCIQPGEH---------------------GSTFGGNPLASAVAIASLDVIR 178 (306)
Q Consensus 124 ~~s~s----K~~~~G~~~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~aa~~al~~~~ 178 (306)
+.+|| |.+++|. +.+++..++++.++++.... +..+..+.+..+.+...++.+
T Consensus 172 ~~~~Sf~~~K~l~~g~-gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l- 249 (375)
T PRK11706 172 IGCFSFHETKNYTAGE-GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA- 249 (375)
T ss_pred EEEEeCCCCccccccC-CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH-
Confidence 77777 9998776 66677777887764432110 111122334444444555443
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHh----hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------
Q 021893 179 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------ 248 (306)
Q Consensus 179 ~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------ 248 (306)
++..++.+++.+.+++.|..+.. .++...........++++.+++ ..+..++.+.|.++||.++..
T Consensus 250 -~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~r~~l~~~L~~~gI~~~~~~~p~~~ 325 (375)
T PRK11706 250 -DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD---LEDRSALINFLKEAGIMAVFHYIPLHS 325 (375)
T ss_pred -HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC---cCCHHHHHHHHHHCCCCccccCCccCc
Confidence 33455555666666666655421 1010000111233445555543 345778999999999986521
Q ss_pred --------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 --------------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 --------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
....+.+=++...+++|++..++.|++++
T Consensus 326 ~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 326 SPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred chhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 01233333334578899999999998765
No 308
>PLN02509 cystathionine beta-lyase
Probab=99.48 E-value=4.7e-13 Score=123.22 Aligned_cols=216 Identities=11% Similarity=0.123 Sum_probs=135.3
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|... ..+.. .+
T Consensus 200 ~~vd~~d~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~-~~~~p-----l~ 266 (464)
T PLN02509 200 KRVNTTNLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSP-VLSRP-----LE 266 (464)
T ss_pred EEeCCCCHHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccc-ccCCh-----hh
Confidence 4456678999998886 57899999999999998877 999999999999999999998621 11221 22
Q ss_pred CCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 120 VRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
...|++ |++|+++| +. -.|+++++ +.+.+.++..........++..+..++..++.+.. ..++.+++...+.
T Consensus 267 ~gaDivv~S~tK~l~G~gdv-~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL~~--R~~r~~~nA~~la 343 (464)
T PLN02509 267 LGADIVMHSATKFIAGHSDV-MAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIA 343 (464)
T ss_pred cCCcEEEecCcccccCCCcc-ceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHH
Confidence 345554 77799984 33 45667764 44444333211112223466667777777776643 3566777777777
Q ss_pred HHHHHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC---
Q 021893 195 QHLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT--- 248 (306)
Q Consensus 195 ~~L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~--- 248 (306)
+.|+... ..+|+.. ....+.|.++.|.+.. ...+..|++.|.= .++-.+ |.
T Consensus 344 ~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~---~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~s 420 (464)
T PLN02509 344 MYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS---VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMS 420 (464)
T ss_pred HHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCC---HHHHHHHHHcCCcceEcccCCCCCceeeCCcccc
Confidence 7777532 1111110 1234567888887732 2334456555541 111111 11
Q ss_pred --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||+++. -|+.+.+++-|+++++
T Consensus 421 h~~~~~~~~~~~Gi~~~liRlSvG----lE~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 421 HASIPAEVREARGLTEDLVRISAG----IEDVDDLISDLDIAFR 460 (464)
T ss_pred cccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHc
Confidence 2578999943 3567788888888876
No 309
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=4.1e-13 Score=121.16 Aligned_cols=221 Identities=10% Similarity=0.042 Sum_probs=140.3
Q ss_pred CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC--CEEEEehhhhccccccccccc
Q 021893 38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSGLARSGRMLAS 115 (306)
Q Consensus 38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g--i~li~De~~~g~~~~g~~~~~ 115 (306)
.+.+++..|++.++++|+ +++++|++|.+.|+++.+.+ +++|+++|+++| +++++|++++ .+.. +
T Consensus 128 ~v~~vd~~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a----~p~~--~ 194 (395)
T PRK08114 128 TTTWFDPLIGADIAKLIQ---PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA----AGVL--F 194 (395)
T ss_pred EEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc----cccc--c
Confidence 346666778999999997 57999999999999999999 999999999984 9999999997 2222 3
Q ss_pred ccCCCCCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 021893 116 DWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE 191 (306)
Q Consensus 116 ~~~~~~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~ 191 (306)
+...+.+|++ |.+|+++| .. .+|.++.+++.++.++..........++..+..+...++.+... .++..++..
T Consensus 195 ~pl~~GaDivv~S~tKyl~Ghsdv-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR--~~~~~~na~ 271 (395)
T PRK08114 195 KALDFGIDISIQAGTKYLVGHSDA-MIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLGVR--LRQHEESSL 271 (395)
T ss_pred CHHHcCCcEEEEcCcccccCCCcc-eeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHHHH--HHHHHHHHH
Confidence 4444456665 66699985 34 67777778776665543222223344566666665555554332 456666677
Q ss_pred HHHHHHHHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CC--------cee--c
Q 021893 192 ELRQHLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RG--------ILA--K 246 (306)
Q Consensus 192 ~l~~~L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~G--------i~~--~ 246 (306)
.+.+.|++.. ..+|+.. ....+.|.++.|++...........|++.|.- .+ ++. .
T Consensus 272 ~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~ 351 (395)
T PRK08114 272 KVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILANQ 351 (395)
T ss_pred HHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceeccCC
Confidence 7777777542 1111110 12345788999988631001234455554432 11 111 0
Q ss_pred c-------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 247 P-------------THDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 247 ~-------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
| ..++.||++.. -|+.+.+++-|+++++
T Consensus 352 ~~~~~~~~~~~~~~~~~~liRlSvG----lEd~~DLi~Dl~~Al~ 392 (395)
T PRK08114 352 PEEIAAIRPAGEVDFTGTLIRLHIG----LEDVDDLIADLAAGFA 392 (395)
T ss_pred chhhhccCChhHhcCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence 0 12368999944 3667778888888776
No 310
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.46 E-value=6.7e-13 Score=121.80 Aligned_cols=218 Identities=17% Similarity=0.193 Sum_probs=130.2
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++++. +.. ....
T Consensus 131 v~~vd~~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~----~~~--~~pl 197 (431)
T PRK08248 131 VKFVDPSDPENFEAAIT---DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS----PYL--LRPI 197 (431)
T ss_pred EEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc----ccc--CChh
Confidence 35566678999999997 47899999999999999988 99999999999999999999861 111 1111
Q ss_pred CCCCcEE--EecccccC-CcccceeeEe-CHHHHhh-------cC--------------------------CCCccCCCC
Q 021893 119 EVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLC-------IQ--------------------------PGEHGSTFG 161 (306)
Q Consensus 119 ~~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~~~~~-------~~--------------------------~~~~~~~~~ 161 (306)
....|++ |++|.++| |. ++|++++ +.+.... +. .........
T Consensus 198 ~~gaDivv~S~tK~lgg~g~-~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 276 (431)
T PRK08248 198 EHGADIVVHSATKFIGGHGT-SIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAA 276 (431)
T ss_pred HcCCCEEEEcCccccCCCCC-ceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCC
Confidence 2345554 77799994 66 7876655 3321100 00 000011123
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee---------eE-EEeeeEEEEEEecCCC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EV-RGRGLFNAVEFDKTAL 227 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~---------~~-~~~g~~~~i~~~~~~~ 227 (306)
.++..+......++.+.. ..++..++...+.+.|++... .+|+... .. .+.|.++.|++...
T Consensus 277 l~p~~a~l~~rgl~tl~~--R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~-- 352 (431)
T PRK08248 277 LSPFNSFLLLQGLETLHL--RMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGG-- 352 (431)
T ss_pred CCHHHHHHHhcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC--
Confidence 344444444444443322 245666777777777776431 1111110 12 35688899988631
Q ss_pred hhhHHHHHHHHHHC--Cceec--------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 PVSAYDICLKMKER--GILAK--------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 ~~~~~~~~~~l~~~--Gi~~~--------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......|.+.|.=- ++-.+ |. .++.||+++. -||.+.+++-|.++|+
T Consensus 353 ~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~Dl~~Al~ 426 (431)
T PRK08248 353 VEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVG----TEAIDDILDDLRQAIR 426 (431)
T ss_pred HHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence 23344555555321 21111 10 2578999944 3667778888888877
No 311
>PRK02769 histidine decarboxylase; Provisional
Probab=99.46 E-value=2.2e-11 Score=109.96 Aligned_cols=213 Identities=14% Similarity=0.091 Sum_probs=144.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC---CEEEEehhhhcccccc--cccccccCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN---ILMIADEIQSGLARSG--RMLASDWEEV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g---i~li~De~~~g~~~~g--~~~~~~~~~~ 120 (306)
|+++|+++|++++.++++|+++..++.+|.+.| +++|.++|++|| +++++|.+|+++...- ....++...
T Consensus 146 d~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~- 220 (380)
T PRK02769 146 DYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD- 220 (380)
T ss_pred cHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-
Confidence 899999999975556999999999999999999 999999999998 6999999998631110 000122212
Q ss_pred CCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCc-----cCCC--CCCHHHHHHHHHHHHHHhhcc---HHHHHHH
Q 021893 121 RPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-----GSTF--GGNPLASAVAIASLDVIRDEK---LAERSAH 188 (306)
Q Consensus 121 ~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~aa~~al~~~~~~~---~~~~~~~ 188 (306)
..|.+++| |.+++.+ ++|+++.+++..+.+.+... ..+. +.+....++..++++.+..++ ..++..+
T Consensus 221 ~vDsis~s~HK~~~~P~-g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~ 299 (380)
T PRK02769 221 GIDSIAISGHKFIGSPM-PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLD 299 (380)
T ss_pred CCCEEEECCcccCCCCC-CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 57877776 9887777 89999998877666543111 0111 234456777778888876644 4566777
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHH
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~ 268 (306)
+.+++.++|++.. ...........+.|..++ .++. +|-.+.+. .+.+|++.+..++++.++.
T Consensus 300 la~~l~~~L~~~g-----~~~~~~p~~~~v~f~~~~-------~~~~-----~~w~l~~~-~~~~hi~~~~~~~~~~~~~ 361 (380)
T PRK02769 300 MAQYAVDRLQANG-----IPAWRNPNSITVVFPCPS-------ERIW-----KKWHLATS-GNQAHIITMPHHNKQQIDS 361 (380)
T ss_pred HHHHHHHHHHhCC-----CEEEcCCCceEEEEcCCC-------HHHH-----hCeeEccc-CCEEEEEECCCCCHHHHHH
Confidence 7777777776642 222222333334443221 1221 56555554 3589999988999999999
Q ss_pred HHHHHHHHHhhhcCC
Q 021893 269 GSKALHDVLELDLPK 283 (306)
Q Consensus 269 ~~~~l~~~l~~~~~~ 283 (306)
+++.|.+.+. -..+
T Consensus 362 f~~dl~~~~~-~~~~ 375 (380)
T PRK02769 362 LIDELIFDLK-NPNK 375 (380)
T ss_pred HHHHHHHHHh-cccc
Confidence 9999988776 4433
No 312
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.46 E-value=7.2e-13 Score=119.92 Aligned_cols=217 Identities=17% Similarity=0.129 Sum_probs=125.7
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.. ..+.. .+
T Consensus 117 ~~vd~~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~-~~~~p-----~~ 183 (380)
T PRK06176 117 TIIDTSDLSQIKKAIK---PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP-YYQNP-----LL 183 (380)
T ss_pred EEcCCCCHHHHHHhcC---cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcccc-ccCCc-----cc
Confidence 4455668999999887 57999999999999998888 999999999999999999999732 11111 23
Q ss_pred CCCcEE--EecccccC-CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 120 VRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
...|++ |++|.++| |-.-.|+++.+ +++.+.++..........++.........++.+.. ..++..++...+.+
T Consensus 184 ~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~tl~~--R~~~~~~~a~~la~ 261 (380)
T PRK06176 184 LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLGL--RMEAHQKNALCVAE 261 (380)
T ss_pred cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence 345555 66799974 32135556664 56666554322222222233333333333322211 12333444455555
Q ss_pred HHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Cce--------eccC----
Q 021893 196 HLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GIL--------AKPT---- 248 (306)
Q Consensus 196 ~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~--------~~~~---- 248 (306)
.|++... .+|.. .....+.|.++.|++.. ......|++.|.=- +.- ..|.
T Consensus 262 ~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~---~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 338 (380)
T PRK06176 262 FLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN---DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTH 338 (380)
T ss_pred HHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---HHHHHHHHHcCCcceEccCCCCCCceeeCCccccc
Confidence 5554310 11100 01234568888998863 23344555544321 111 1111
Q ss_pred -------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++.. -||.+.+++-|+++++
T Consensus 339 ~~~~~~~~~~~gi~~~liR~svG----lE~~~dli~dl~~Al~ 377 (380)
T PRK06176 339 ACIPKEQREAAGIRDGLVRLSVG----IEHEQDLLEDLEQAFA 377 (380)
T ss_pred ccCCHHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2578999943 3667778888888776
No 313
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.46 E-value=1.1e-11 Score=122.76 Aligned_cols=223 Identities=13% Similarity=0.127 Sum_probs=143.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|+++++++++++++|++..++..++...+ +++|+++|+++|+++++|.++. +. .+ + ...-.+..|+
T Consensus 626 D~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~al--~~--l-~~pg~~GADi 696 (954)
T PRK05367 626 DLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNAQ--VG--L-ARPGDIGADV 696 (954)
T ss_pred CHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhhc--cC--C-CChhhcCCCE
Confidence 799999999876556888877776665443356 9999999999999999999996 22 11 1 1112345788
Q ss_pred EEec--cccc-----CCcccceeeEeCHHHHhhcCCCC-----c---cCCCCCCH----HHHHHHHHHHHHHhhccHHHH
Q 021893 125 VILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE-----H---GSTFGGNP----LASAVAIASLDVIRDEKLAER 185 (306)
Q Consensus 125 ~s~s--K~~~-----~G~~~~g~~~~~~~~~~~~~~~~-----~---~~~~~~~~----~~~~aa~~al~~~~~~~~~~~ 185 (306)
++++ |+|+ ||. .+|++.+++.+...+.... . .+.....+ ..+..+...++.+..+++.+.
T Consensus 697 ~~~s~HK~f~~P~G~GGP-g~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~ 775 (954)
T PRK05367 697 SHLNLHKTFCIPHGGGGP-GVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQA 775 (954)
T ss_pred EEecCcccCCCCcCCCCC-ceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 7766 9986 566 7888888766543333211 0 01111112 233335555566666666655
Q ss_pred HH---HHHHHHHHHHHHHHhhCCCceeeEEE--eeeEEEEEEecCC--ChhhHHHHHHHHHHCCceecc---CCCCEEEE
Q 021893 186 SA---HLGEELRQHLFKIQQQFPNYVKEVRG--RGLFNAVEFDKTA--LPVSAYDICLKMKERGILAKP---THDTIVRL 255 (306)
Q Consensus 186 ~~---~~~~~l~~~L~~~~~~~~~~~~~~~~--~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---~~~~~lRi 255 (306)
.+ .+..++.++|++..+ ..+..+. .-.-+.+++...+ .+....++++.|.+.|+.... ...+.+|+
T Consensus 776 a~~~~~~A~Yl~~~L~~~~~----~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i 851 (954)
T PRK05367 776 TEVAILNANYIAKRLKDHYP----VLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMV 851 (954)
T ss_pred HHHHHHHHHHHHHHHHhhcC----ccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEE
Confidence 55 788888888877421 1111100 0001222332111 124568899999999987643 13778999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 256 TPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 256 ~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+|.-..+++|||+++++++++.. ++.+
T Consensus 852 ~ptE~~s~~elDr~~~al~~i~~-e~~~ 878 (954)
T PRK05367 852 EPTESESKAELDRFCDAMIAIRA-EIDE 878 (954)
T ss_pred EeeecCCHHHHHHHHHHHHHHHH-HHHH
Confidence 99999999999999999998888 7654
No 314
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.45 E-value=5.3e-13 Score=120.03 Aligned_cols=182 Identities=12% Similarity=0.104 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.++ +++++++++++++++|.+.+ +++|.++|+++|+++++|++|+ ++. ..+..+ ...+|+
T Consensus 126 ~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~--~~~~~~--~~~~D~ 193 (353)
T TIGR03235 126 IDVDELADAIR---PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGK--ITVDLS--ADRIDL 193 (353)
T ss_pred CCHHHHHHhCC---CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCC--cccccc--ccCCCE
Confidence 37899999886 46899999999999999988 9999999999999999999997 211 122222 335677
Q ss_pred EEec--ccccCCcccceeeEeCHHHHhh--cCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 021893 125 VILG--KALGGGVIPVSAVLADKEVMLC--IQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGE 191 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~ 191 (306)
+++| |.++ .. ++|+++++++.... +.+... ....+.+.....+..++++.+.. ++..++++++.+
T Consensus 194 ~~~s~~K~~g-p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~ 271 (353)
T TIGR03235 194 ISCSGHKIYG-PK-GIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRN 271 (353)
T ss_pred EEeehhhcCC-CC-ceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6555 9754 33 57889888775322 222111 11234456666777777777643 446678888888
Q ss_pred HHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC
Q 021893 192 ELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 248 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 248 (306)
++++.|++.+.. ..... .....++.+.++ +.+..++.+.|.+ +|.++++
T Consensus 272 ~l~~~l~~~g~~---~~~~~~~~~~~i~~~~~~----~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 272 QLRDALQTLGVK---LNGDPAETIPHILNFSID----GVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred HHHHHhccCCeE---EeCCcccccCCEEEEEeC----CcCHHHHHHHHhC-CeEEEch
Confidence 888887663211 11111 112334455443 3456788888864 8888764
No 315
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.45 E-value=3.2e-12 Score=114.44 Aligned_cols=200 Identities=12% Similarity=0.058 Sum_probs=137.9
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV 138 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~ 138 (306)
+++++|.+.+..+++|...+ ++++.+++++++|.+++ + .+..+..+.++ .-+.+..|.++ .. ++
T Consensus 129 ~~~~~v~~th~ETstGv~~~---------~l~~~~~~l~iVDavss-~--g~~~id~~~~d--~~~~ssqK~lg-P~-Gl 192 (349)
T TIGR01364 129 EDAAYVHYCANETIHGVEFR---------ELPDVKNAPLVADMSSN-I--LSRPIDVSKFG--LIYAGAQKNIG-PA-GL 192 (349)
T ss_pred CCCCEEEEcCCCCcccEecc---------eecccCCCeEEEEcccc-c--cCccCCHHHcc--EEEEecccccC-CC-ce
Confidence 47899999999999997643 67778899999999998 1 22333344332 23335559996 44 68
Q ss_pred eeeEeCHHHHhhcCCCC-----------ccC-CCCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHHHHh
Q 021893 139 SAVLADKEVMLCIQPGE-----------HGS-TFGGNPLASAVAIASLDVIRDE-K---LAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~~l~~~L~~~~~ 202 (306)
|+++.++++++++.+.. ... .++++...+.+..++++.+.++ + +.++.+++.+++++.|+++..
T Consensus 193 g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~g 272 (349)
T TIGR01364 193 TVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNG 272 (349)
T ss_pred EEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999988765421 011 2355666777788999988765 3 567777888888888888731
Q ss_pred hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 203 QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 203 ~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
-+. ...... .....+.+.++.. ....++.+.+.++|+.+.++. .+.+|+++..+++.+||+.+++.|+++++
T Consensus 273 l~~-~~~~~~~rs~~v~sf~~~~~---~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 273 FYR-NPVDPRNRSRMNVVFTLGNE---ELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred eec-cCCCHHHcCCeEEEEecCCh---hHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 110 101111 1224556665531 123577788899999666653 47899999999999999999999998765
No 316
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.44 E-value=1.2e-11 Score=113.03 Aligned_cols=223 Identities=14% Similarity=0.156 Sum_probs=133.9
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCC-CC
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEV-RP 122 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~-~~ 122 (306)
|+++|+++|++.. +.+.+++.+|....+|...+ +++|.++|++||+++|+|++|+... ...... ...... ..
T Consensus 190 D~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~-~~g~~~Gra 264 (444)
T TIGR03531 190 DVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGLQSNKYMELI-NKAIKVGRV 264 (444)
T ss_pred CHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcCcChhhhhhh-hccccccCC
Confidence 8999999999653 33444444444333344455 9999999999999999999998311 111100 011112 24
Q ss_pred cEE--EecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 123 DMV--ILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~--s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
|++ +++|.+.... ..|.++. ++++++.+........ .+...+.+....+..-.+ +++.++..++.+++.+.|
T Consensus 265 d~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~y~g~~--~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L 341 (444)
T TIGR03531 265 DAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKSYPGRA--SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELL 341 (444)
T ss_pred CeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHhccCCC--CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 5569887322 2344546 6778777765322211 222333333333322222 446777888899999999
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCce----eccCC--------------------CCEE
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL----AKPTH--------------------DTIV 253 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~----~~~~~--------------------~~~l 253 (306)
+++..+....+...+.....+.+.+.... +.+..++...|..++|. +.++. ..++
T Consensus 342 ~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 420 (444)
T TIGR03531 342 QKLAERHGERLLDTPENPISSAMTLSTLK-GKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYI 420 (444)
T ss_pred HHHHHhhCcEeecCCCCceeEEEeccccc-ccCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhH
Confidence 99887765455555554444555555321 34577888999888652 22211 1244
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 254 RLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 254 Ri~~~~~~t~~~i~~~~~~l~~~l 277 (306)
-++..+.++++|++.++++|++.+
T Consensus 421 ~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 421 TAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred HHHHHhCCcHHHHHHHHHHHhhcC
Confidence 444456789999999999998753
No 317
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.42 E-value=6.5e-11 Score=116.84 Aligned_cols=210 Identities=13% Similarity=0.113 Sum_probs=142.9
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--------CCEEEEehhhhcccccccccccccCCCCCcEEEec--
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--------NILMIADEIQSGLARSGRMLASDWEEVRPDMVILG-- 128 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--------gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s-- 128 (306)
+++++|.+.+++|.+|.+.| ++.|..+++.. ++++++|.+|+ .|. ..++...+.+|++++|
T Consensus 191 ~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~----~g~-~piDv~~~~~Dfl~~S~H 261 (805)
T PLN02724 191 EAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG----CGT-SPPDLSRYPADFVVVSFY 261 (805)
T ss_pred CCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh----cCC-CCCChhhcCCCEEEEecc
Confidence 46789999999999999998 87765555432 36899999997 222 1233334567887666
Q ss_pred ccccCCcccceeeEeCHHHHhhcCCCCccC------------------------CCCCCHHHHHHHHHHHHHHhh---cc
Q 021893 129 KALGGGVIPVSAVLADKEVMLCIQPGEHGS------------------------TFGGNPLASAVAIASLDVIRD---EK 181 (306)
Q Consensus 129 K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~aa~~al~~~~~---~~ 181 (306)
|.+|+.. ++|++++++++++.+.+...++ ..+.|..+++++.++++.+.. +.
T Consensus 262 K~~GgP~-G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~ 340 (805)
T PLN02724 262 KIFGYPT-GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISA 340 (805)
T ss_pred eeccCCC-CceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHH
Confidence 9887555 7899999998877776532211 013466777777788888766 55
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCC-CceeeE---------EEeeeEEEEEEecCC-ChhhHHHHHHHHHHCCceeccC--
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFP-NYVKEV---------RGRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAKPT-- 248 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~---------~~~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~~~-- 248 (306)
+.++..++.+++.+.|.++....+ +.+... ...+..+.|.+.... ......++...+.++||.++.+
T Consensus 341 I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~ 420 (805)
T PLN02724 341 IAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCF 420 (805)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccc
Confidence 678888999999998887742110 011111 135567777776432 1122344555555668887632
Q ss_pred -------------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------------------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..+++|+|++.++|.+||+.+++.|++.+-
T Consensus 421 Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 421 CNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred cCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 127899999999999999999999999775
No 318
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.42 E-value=4.9e-11 Score=115.99 Aligned_cols=222 Identities=13% Similarity=0.137 Sum_probs=142.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++++++++++|.+..+++.++...+ +++|+++|+++|+++++|.++. .+.......-.+..|++
T Consensus 627 Dle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~----~a~~~l~~Pg~~GADi~ 698 (954)
T PRK12566 627 DLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANL----NAQVGLARPADIGADVS 698 (954)
T ss_pred CHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeCh----hhccCCCChhhcCCCEE
Confidence 899999999876678888888888776654444 9999999999999999999996 11111011224567887
Q ss_pred Eec--cccc-----CCcccceeeEeCHHHHhhcCCCC-------------ccCCCCCCHHHHHHHHHHHHHHhhccHHH-
Q 021893 126 ILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE-------------HGSTFGGNPLASAVAIASLDVIRDEKLAE- 184 (306)
Q Consensus 126 s~s--K~~~-----~G~~~~g~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~- 184 (306)
.++ |+|+ ||. .+|.+..++.+...+.... .+...+++...+.++..-++.+..+ +.+
T Consensus 699 ~~s~HKtf~~P~G~GGP-~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~a 776 (954)
T PRK12566 699 HMNLHKTFCIPHGGGGP-GMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADA 776 (954)
T ss_pred EecCCcccCcCccCCCC-ccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHH
Confidence 665 9886 565 6777777775443333211 1111123334455555556665554 322
Q ss_pred --HHHHHHHHHHHHHHHHHhhCCCceeeEEEee--eEEEEEEecCC--ChhhHHHHHHHHHHCCceec----cCCCCEEE
Q 021893 185 --RSAHLGEELRQHLFKIQQQFPNYVKEVRGRG--LFNAVEFDKTA--LPVSAYDICLKMKERGILAK----PTHDTIVR 254 (306)
Q Consensus 185 --~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g--~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~----~~~~~~lR 254 (306)
....+..+++++|.+. + +..+.....- .-+.+.+...+ .+.+..++.++|.+.|+... | ..+.+|
T Consensus 777 a~~ailnAnYla~rL~~~---~-~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fP-v~~~Lm 851 (954)
T PRK12566 777 SEVAILSANYLANQLGGA---F-PVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFP-VPGTLM 851 (954)
T ss_pred HHHHHHHHHHHHHHhHhh---C-CCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeec-cCCEEE
Confidence 2245777888888763 2 1222211001 11222222111 13456789999999887754 3 377899
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 255 LTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
++|.-..+++|||+++++++++.+ ++.+
T Consensus 852 IepTE~eskeEIDrf~eAL~~I~~-e~~~ 879 (954)
T PRK12566 852 VEPTESESKAELDRFVEAMLSIRA-EIGK 879 (954)
T ss_pred EEeeeeCCHHHHHHHHHHHHHHHH-HHHH
Confidence 999999999999999999999988 7543
No 319
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=4e-12 Score=109.93 Aligned_cols=227 Identities=19% Similarity=0.235 Sum_probs=152.2
Q ss_pred CcccccCCCHHHHHHHHHhcC------Cc----EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-
Q 021893 38 GHLKVDFGDITALEKIFKESG------DQ----IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G- 105 (306)
Q Consensus 38 ~~~~~~~~d~~~le~~i~~~~------~~----~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g- 105 (306)
.+.+|.|||++++|..+.+.. ++ .+.++++..+.++|.+++ +++|.++..+|...+|.||.++ |
T Consensus 201 ~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~ 276 (467)
T KOG1358|consen 201 TISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGV 276 (467)
T ss_pred eeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEeccccccc
Confidence 368899999999998887642 11 577889999999999999 9999999999999999999998 4
Q ss_pred ccccccccccccCCCC---CcEEEec--cccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHH
Q 021893 106 LARSGRMLASDWEEVR---PDMVILG--KALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDV 176 (306)
Q Consensus 106 ~~~~g~~~~~~~~~~~---~d~~s~s--K~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~ 176 (306)
+|..|.+. .+++++. .|+++.| -+++ ||+ ++++.-+.+.-+-...+..| +.++....+|..++..
T Consensus 277 lg~~GrGv-teH~~v~~~~iDiv~~sm~~alas~GgF-----c~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i 350 (467)
T KOG1358|consen 277 LGKTGRGV-TEHFGVPITDIDIVTASMETALASGGGF-----CAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI 350 (467)
T ss_pred ccccCccc-cccCCCCccceeeeeecccccccccCce-----eecceeeEeeeeccccceeeeccCchhhhhhHHHHHHH
Confidence 57777776 6777764 3555444 4444 455 66655544433332333334 3355666677777777
Q ss_pred Hhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceeccC--
Q 021893 177 IRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKPT-- 248 (306)
Q Consensus 177 ~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~-- 248 (306)
+.. .+..+.+++....+.+.|+... ...........++.+.+.... ...-.++++..++.+|+.+...
T Consensus 351 ~~~~p~~~~~L~~k~~~~H~~l~~~s----~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~ 426 (467)
T KOG1358|consen 351 EEWNPEIVQPLRAKVAKFHAALSSNS----GFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKY 426 (467)
T ss_pred HhhCcchhhhhhccccccchhhhcCC----ceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhh
Confidence 665 3455566666666666666632 011111222233333333211 1112456778887778877632
Q ss_pred --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 --------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 --------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
-+..+|++++..+++++++.+++.|+++..
T Consensus 427 ~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 427 LEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred hhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 256899999999999999999999998876
No 320
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.40 E-value=8.1e-11 Score=107.81 Aligned_cols=221 Identities=15% Similarity=0.089 Sum_probs=142.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc------CCEEEEehhhhcccc---ccc-cccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR---SGR-MLAS 115 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~------gi~li~De~~~g~~~---~g~-~~~~ 115 (306)
|++.|+++|+ +++.+|.+...++.+|.+.| +++|.++|+++ |+++++|.+|+|+.. .+. .+.+
T Consensus 175 d~~~L~~~i~---~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~ 247 (431)
T TIGR01788 175 DPEQVVEAVD---ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF 247 (431)
T ss_pred CHHHHHHHHh---hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc
Confidence 7899999998 46889999999999999999 99999999999 999999999996421 121 1112
Q ss_pred ccCCCCCcEEEec--ccccCCcccceeeEeCHH--HHhhcCCC---C---c-cCCCCCC--HHHHHHHHHHHHHHhhc--
Q 021893 116 DWEEVRPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG---E---H-GSTFGGN--PLASAVAIASLDVIRDE-- 180 (306)
Q Consensus 116 ~~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~~~---~---~-~~~~~~~--~~~~~aa~~al~~~~~~-- 180 (306)
. ....|.+++| |.+.+.. ++|+++.+++ +...+... . . ..+...+ ..........++.+..+
T Consensus 248 ~--~~~~DSis~s~HK~~~~P~-g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~ 324 (431)
T TIGR01788 248 R--LPRVKSINVSGHKYGLVYP-GVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGY 324 (431)
T ss_pred C--CCCceEEEECchhccCCCC-CcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHH
Confidence 2 2245777776 8765666 8888887654 22322110 0 0 0111111 11223344444444443
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCC-ChhhHHHHHHHHHHCCceec----cC---CC
Q 021893 181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAK----PT---HD 250 (306)
Q Consensus 181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~----~~---~~ 250 (306)
++.++..++.+++.++|++.. ......+ ....++.|.+.... ...+..++.+.|.++|+.+. |. +.
T Consensus 325 ~~i~~~~~~la~~l~~~L~~~~----~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~ 400 (431)
T TIGR01788 325 RKIMQNSLDVARYLAEEIAKLG----PFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDI 400 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC----CEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCe
Confidence 345666677777777777652 1222221 23445556554311 12456789999999998642 22 23
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
-.+|++.....+++.++.+++.|++++. .+
T Consensus 401 ~~lR~~~~~~~~~~~~~~~~~~~~~~~~-~~ 430 (431)
T TIGR01788 401 VVMRIVVREGFSRDLAELLIEDIEAALA-YL 430 (431)
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHHHH-hh
Confidence 4689998778899999999999999887 54
No 321
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.40 E-value=7.1e-12 Score=115.13 Aligned_cols=217 Identities=15% Similarity=0.221 Sum_probs=128.4
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++.+|++.++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++++. +. ......
T Consensus 131 ~~vd~~d~~~l~~ai~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~----~~--~~~pl~ 197 (427)
T PRK05994 131 RWADADDPASFERAIT---PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS----PY--LIRPIE 197 (427)
T ss_pred EEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc----cc--cCCccc
Confidence 4555668999999987 57999999999999999988 99999999999999999999972 11 122234
Q ss_pred CCCcEE--EecccccC-CcccceeeEe-CHH-----------------------HHhhcC-------C---CCccCCCCC
Q 021893 120 VRPDMV--ILGKALGG-GVIPVSAVLA-DKE-----------------------VMLCIQ-------P---GEHGSTFGG 162 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~-----------------------~~~~~~-------~---~~~~~~~~~ 162 (306)
+.+|++ |++|.++| |- .+|.+++ ... +.+.+. . .........
T Consensus 198 ~gaDivv~S~tK~lgg~~~-~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 276 (427)
T PRK05994 198 HGADIVVHSLTKFLGGHGN-SMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAI 276 (427)
T ss_pred cCCcEEEEcCccccCCCCC-cEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCC
Confidence 556665 67799984 43 4554433 221 110000 0 000111223
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee----------eEEEeeeEEEEEEecCCCh
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK----------EVRGRGLFNAVEFDKTALP 228 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~----------~~~~~g~~~~i~~~~~~~~ 228 (306)
++..+..+...|+.+.. ..++.+++...+.+.|+.... .+|+... ...+.|.++.|++... .
T Consensus 277 ~~~~A~l~~~~l~tL~~--r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~--~ 352 (427)
T PRK05994 277 SPFNAFLILTGIETLPL--RMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGG--Y 352 (427)
T ss_pred CHHHHHHHHcCcccHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCC--H
Confidence 44555555555544432 356666777777777765431 1121100 1245688889988631 2
Q ss_pred hhHHHHHHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 229 VSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 229 ~~~~~~~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.....|++.|.=-.+.++ |. .++.||++..+ ||.+.+++.|+++|+
T Consensus 353 ~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~dl~~Al~ 425 (427)
T PRK05994 353 EAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDVDDIIADLEQALA 425 (427)
T ss_pred HHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHh
Confidence 334455555432111111 11 24689999543 566777777777775
No 322
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.39 E-value=4.2e-12 Score=115.93 Aligned_cols=218 Identities=12% Similarity=0.133 Sum_probs=134.4
Q ss_pred cccccCC-CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893 39 HLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW 117 (306)
Q Consensus 39 ~~~~~~~-d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~ 117 (306)
+.+++.+ |++.++++|+ ++|++|+++.+.|+++.+.+ +++|.++|+++|+++|+|++++ .++.+..
T Consensus 128 v~~vd~~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~~------tP~~~~p 194 (432)
T PRK06702 128 VTFFNPNLTADEIVALAN---DKTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA------TPYLCQA 194 (432)
T ss_pred EEEECCCCCHHHHHHhCC---cCCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCCC------chhhCCh
Confidence 3455554 8999999998 57999999999999998888 9999999999999999999975 2222444
Q ss_pred CCCCCcEE--EecccccC-Ccccce-eeEeCH----------HHHh---------------------hcC-CCCccCCCC
Q 021893 118 EEVRPDMV--ILGKALGG-GVIPVS-AVLADK----------EVML---------------------CIQ-PGEHGSTFG 161 (306)
Q Consensus 118 ~~~~~d~~--s~sK~~~~-G~~~~g-~~~~~~----------~~~~---------------------~~~-~~~~~~~~~ 161 (306)
....+|++ |.+|.++| +. -+| .++.+. ++.+ ..+ ........+
T Consensus 195 l~~GADIvv~S~TKy~~Ghsd-~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 273 (432)
T PRK06702 195 FEHGANIIVHSTTKYIDGHAS-SLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNC 273 (432)
T ss_pred hhcCCCEEEEccccccCCCcc-eeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCC
Confidence 44555554 88898883 22 222 232211 1110 000 001112335
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCce---------eeE-EEeeeEEEEEEecCCC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEV-RGRGLFNAVEFDKTAL 227 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~---------~~~-~~~g~~~~i~~~~~~~ 227 (306)
.+++....+..+|+.+.. ..++.+++...+.+.|++... .+|+.. ... .+.|.++.|.+...
T Consensus 274 ~sp~~a~l~~rgL~Tl~l--R~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~-- 349 (432)
T PRK06702 274 MSPFNAYISNIGLETLHL--RMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGG-- 349 (432)
T ss_pred CCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC--
Confidence 677777777776765543 355667788888888886431 112111 011 35678889988631
Q ss_pred hhhHHHHHHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 228 PVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......|++.|.=-.+.++ |. .++.||++.. -|+.+.+++-|++++.
T Consensus 350 ~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG----lEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 350 LEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVG----IEDVSDIIADLEAALV 423 (432)
T ss_pred HHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2334455555532111111 11 2478999943 3678888999999988
No 323
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.39 E-value=5.6e-12 Score=115.67 Aligned_cols=216 Identities=14% Similarity=0.155 Sum_probs=127.3
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++++. +.. ........|
T Consensus 142 ~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~----~~~--~~pl~~GaD 208 (436)
T PRK07812 142 PDDLDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT----PYL--IRPLEHGAD 208 (436)
T ss_pred CCCHHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc----ccc--CCchhcCCC
Confidence 357888888887 57999999999999999999 99999999999999999999862 111 122223455
Q ss_pred E--EEecccccC-CcccceeeEe-CHHHH-hh-----------------------------cC-CCCccCCCCCCHHHHH
Q 021893 124 M--VILGKALGG-GVIPVSAVLA-DKEVM-LC-----------------------------IQ-PGEHGSTFGGNPLASA 168 (306)
Q Consensus 124 ~--~s~sK~~~~-G~~~~g~~~~-~~~~~-~~-----------------------------~~-~~~~~~~~~~~~~~~~ 168 (306)
+ .|++|.++| |- -+|.++. +..+. .. .+ ..........++..+.
T Consensus 209 ivv~S~tK~lgg~G~-~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ 287 (436)
T PRK07812 209 IVVHSATKYLGGHGT-AIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAF 287 (436)
T ss_pred EEEEecccccCCCCC-eEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 5 478899983 33 3444444 32210 00 00 0001112233444444
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCce--------e-eE-EEeeeEEEEEEecCCChhhHHHH
Q 021893 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV--------K-EV-RGRGLFNAVEFDKTALPVSAYDI 234 (306)
Q Consensus 169 aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~--------~-~~-~~~g~~~~i~~~~~~~~~~~~~~ 234 (306)
.++..++.+.. ..++..++...+.+.|++... .+|+.. . .. .+.|.++.|++... ......|
T Consensus 288 l~~rgl~tL~~--R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~--~~~~~~f 363 (436)
T PRK07812 288 LIAQGLETLSL--RIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGG--VEAGKAF 363 (436)
T ss_pred HHhcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC--HHHHHHH
Confidence 44444444432 255666777777777776431 112110 0 11 35688899998631 2334455
Q ss_pred HHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 235 CLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 235 ~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.+.|.=-...++ |. .++.||++.. -|+.+.+++-|+++++ ..+
T Consensus 364 ~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvG----lEd~~dli~dl~~Al~-~~~ 433 (436)
T PRK07812 364 VNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVG----IEGIDDILADLEAGFA-AAK 433 (436)
T ss_pred HHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH-hhh
Confidence 555532111111 10 2578999943 3667778888888887 544
No 324
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.38 E-value=2.6e-11 Score=110.07 Aligned_cols=215 Identities=18% Similarity=0.200 Sum_probs=125.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++.++++++ +++++|+..+ ++|...+ +++|.++|++||+++|+|++|+ |....|.. ...++ .++
T Consensus 110 d~~~l~~~i~---~~tkav~~~~---~~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~ 175 (379)
T PRK11658 110 TPEAIEAAIT---PRTKAIIPVH---YAGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARG--TAI 175 (379)
T ss_pred CHHHHHHhcc---cCCeEEEEeC---CCCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCC--CEE
Confidence 7899999987 4678776332 3677777 9999999999999999999998 43333322 22333 367
Q ss_pred EEec--ccccCCcccceeeEe-CHHHHhhcCCCCc-c-----------------------CCCCCCHHHHHHHHHHHHHH
Q 021893 125 VILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEH-G-----------------------STFGGNPLASAVAIASLDVI 177 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~aa~~al~~~ 177 (306)
+||+ |.+.+| +.|+++. ++++.++++.... + ..+..+.+..+.+...++.+
T Consensus 176 ~Sf~~~K~l~~g--~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l 253 (379)
T PRK11658 176 FSFHAIKNITCA--EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL 253 (379)
T ss_pred EeCCCCCcCccc--CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH
Confidence 7777 666554 5566666 4777765543110 0 01112223333333333322
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------
Q 021893 178 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------- 248 (306)
Q Consensus 178 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------- 248 (306)
++..++.+++.+++++.|+.+......... ........+.+.++....+.+..++.+.|.++||.++..
T Consensus 254 --~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~ 331 (379)
T PRK11658 254 --EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQK 331 (379)
T ss_pred --HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccCh
Confidence 445666667777777777654211000000 001122333444432111245778999999999877621
Q ss_pred -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
....+.+-.+...++++++..++.|++++.
T Consensus 332 ~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 332 YYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG 378 (379)
T ss_pred hhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 113444444456889999999999988753
No 325
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.38 E-value=1.6e-10 Score=113.09 Aligned_cols=254 Identities=15% Similarity=0.140 Sum_probs=165.0
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCccc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVII 77 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~ 77 (306)
++++....+-||..-++....+- .++.++. -|+++|+++++++++++++|++..+++. |.+.
T Consensus 578 R~~vlip~saHgtnPasa~~~G~------------~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~-G~~e 644 (939)
T TIGR00461 578 RNICLIPVSAHGTNPASAAMAGM------------QVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTH-GVFE 644 (939)
T ss_pred CCEEEEEccccCcCHHHHHHCCC------------EEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcC-ceec
Confidence 56788888888876554333321 2233333 2899999999976678999999888874 5443
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCcEEEec--cccc-----CCcccceeeEeCHHHHh
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVML 149 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~g~~~~~~~~~~ 149 (306)
++ +++|+++|+++|.++++|.++.. . ... ...-.+..|++.++ |+|+ ||. .+|++.+++.+..
T Consensus 645 ~~---I~eI~~iah~~G~~v~VDgAq~~al----~~l-~~Pg~~GaDi~~~s~HKtf~~P~G~GGP-g~G~i~vr~~L~~ 715 (939)
T TIGR00461 645 PT---IQHACDIVHSFGGQVYLDGANMNAQ----VGL-TSPGDLGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKSHLIP 715 (939)
T ss_pred cc---HHHHHHHHHHcCCEEEEEecChhhC----CCC-CCccccCCCEEEecCCccCCCCCCCCCC-CeEEEEEhhhchh
Confidence 22 99999999999999999999962 2 111 12223567888775 9887 788 8999999877554
Q ss_pred hcCCCC----------------ccCCCCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893 150 CIQPGE----------------HGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKE 210 (306)
Q Consensus 150 ~~~~~~----------------~~~~~~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 210 (306)
.+-... .+...+++...+..+...++.+..+++ .+..-.+..++.++|++.. +..+.
T Consensus 716 ~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~----~~l~~ 791 (939)
T TIGR00461 716 FLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHY----PILFV 791 (939)
T ss_pred hcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccC----ccccc
Confidence 432110 011123455556667777777776554 3445567778888887621 12221
Q ss_pred EEE--eeeEEEEEEecC--CChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 211 VRG--RGLFNAVEFDKT--ALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 211 ~~~--~g~~~~i~~~~~--~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
... .-.-+.+.+.+. ..+....+++++|.+.|+....- ..+.+.+.|.-..+++|||++++.+.++.+ ++.+
T Consensus 792 ~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~-e~~~ 870 (939)
T TIGR00461 792 GTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKE-EINA 870 (939)
T ss_pred CCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHH-HHHH
Confidence 110 111133333311 12356789999999999875321 234788888788999999999999988877 6654
No 326
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.37 E-value=1.5e-11 Score=109.82 Aligned_cols=247 Identities=18% Similarity=0.167 Sum_probs=151.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||..+..|.|.+..+..... -+...+.+++..+.+.+++++.. +++++|++|.+.|++-.+++
T Consensus 102 GD~vl~~~~~YG~t~~~~~~~l~---------~~gi~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D--- 167 (396)
T COG0626 102 GDHVLLPDDLYGGTYRLFEKILQ---------KFGVEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD--- 167 (396)
T ss_pred CCEEEecCCccchHHHHHHHHHH---------hcCeEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc---
Confidence 35677777777555433222211 12233455666677777777763 48999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeC-HHHHhhcCCCCc-
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEH- 156 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~- 156 (306)
+++|.++|+++|+++|+|++... +..++.+.+..|++ |.+|.++| +=.-.|.++++ +++.+.+.....
T Consensus 168 -I~~i~~~A~~~g~~vvVDNTfat------P~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~ 240 (396)
T COG0626 168 -IPAIARLAKAYGALVVVDNTFAT------PVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA 240 (396)
T ss_pred -HHHHHHHHHhcCCEEEEECCccc------ccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh
Confidence 99999999999999999999872 22245556667766 77799995 22144546655 455554422111
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEe
Q 021893 157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFD 223 (306)
Q Consensus 157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~ 223 (306)
......++..+...+..++.+... .++..++...+.+.|++... .+|+. .....+.|.++.|.+.
T Consensus 241 ~~G~~l~p~dA~l~lRGlkTL~~R--m~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~ 318 (396)
T COG0626 241 NTGAVLSPFDAWLLLRGLRTLALR--MERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELK 318 (396)
T ss_pred hcCCCCCHHHHHHHHhccchHHHH--HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeC
Confidence 123334566666666666665442 45556666666666666321 11100 0122247888999988
Q ss_pred cCCChhhHHHHHHHHHHCCceec----------c-----------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 224 KTALPVSAYDICLKMKERGILAK----------P-----------------THDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~Gi~~~----------~-----------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
. +....+|.+.|.--.+..+ | ..++.||++.. -|+++.+++-|+++
T Consensus 319 ~---~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLi~Dl~~A 391 (396)
T COG0626 319 N---EEAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQA 391 (396)
T ss_pred C---hHHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHH
Confidence 5 2344556555543322222 1 03689999943 36777788888888
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
++
T Consensus 392 l~ 393 (396)
T COG0626 392 LA 393 (396)
T ss_pred HH
Confidence 76
No 327
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.36 E-value=3.1e-11 Score=108.64 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=133.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV 138 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~ 138 (306)
+++++|.+.+..+.+|.+.+ ++++.||+++++|.+++ + .+..+..+.++ .++.+..|.+| .. ++
T Consensus 137 ~~~~lV~~~h~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~--g~~~idv~~~~--~~~ss~~K~lG-P~-G~ 200 (355)
T cd00611 137 PDAAYVHYCSNETIHGVEFD---------EVPDTGGVPLVADMSSN-I--LSRPIDVSKFG--VIYAGAQKNLG-PA-GV 200 (355)
T ss_pred CCCCEEEEeCCcccccEEcc---------eecccCCCeEEEEcccc-c--cCCCCCHHHhC--EEEeecccccC-CC-ce
Confidence 57899999999999997632 35556999999999998 1 12233344443 34444669875 44 78
Q ss_pred eeeEeCHHHHhhcCCCC-----------cc-CCCCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHHHHh
Q 021893 139 SAVLADKEVMLCIQPGE-----------HG-STFGGNPLASAVAIASLDVIRDE-K---LAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~~l~~~L~~~~~ 202 (306)
|++++++++++++.+.. .. ..+++|..++.+..++++++.+. + +.++.+++.+++++.|+++..
T Consensus 201 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g 280 (355)
T cd00611 201 TVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG 280 (355)
T ss_pred EEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 89999999887766521 00 12345666778888999988765 3 567778888888888887721
Q ss_pred hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 203 QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 203 ~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
-+. ...... ..+..+.|.++.. ....++...+.++|+.+.++. .+.+|+++..++|++||+.+++.|+++
T Consensus 281 l~~-~~~~~~~rs~~vvsf~~~~~---~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 281 FYR-GPVDKRARSRMNVPFRLGKE---ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccc-cCCCHHHcCceEEEEEcCCh---hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 110 111111 2234466665531 122455578888999855543 478999999999999999999999875
No 328
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.34 E-value=2.2e-11 Score=107.66 Aligned_cols=216 Identities=17% Similarity=0.220 Sum_probs=136.8
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++.+|++.++++++ +++.+|++|.+.|+.....+ +++|.++|+++|+++|+|++..+. +-++.+.
T Consensus 145 ~~vd~~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p------~~~~pL~ 211 (409)
T KOG0053|consen 145 DFVDVDDLKKILKAIK---ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP------YNQDPLP 211 (409)
T ss_pred eeechhhHHHHHHhhc---cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc------cccChhh
Confidence 4555566777777777 57999999999999999988 999999999999999999998732 2356666
Q ss_pred CCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 120 VRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
+.+|++ |.+|.|+| -+ -.|.++.+ +++.++++.......++.++..+......++.+.-. .++..++.-.+.
T Consensus 212 lGADIV~hSaTKyi~Ghsdv-i~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl~lR--i~~~~ena~~~A 288 (409)
T KOG0053|consen 212 LGADIVVHSATKYIGGHSDV-IGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKTLHLR--INKHSENALKIA 288 (409)
T ss_pred cCCCEEEEeeeeeecCCcce-eeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcchhhhh--HHHHHHHHHHHH
Confidence 677877 67799995 33 45557775 888888776656666777888777766666544321 222233333344
Q ss_pred HHHHHHH----hhCCCc---------eeeEE-EeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------c---
Q 021893 195 QHLFKIQ----QQFPNY---------VKEVR-GRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------P--- 247 (306)
Q Consensus 195 ~~L~~~~----~~~~~~---------~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~--- 247 (306)
+.|++.. ..+|+. ..... +.|.++.+.... ...+.+|+..|. .++.-++ |
T Consensus 289 ~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~---~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~m 365 (409)
T KOG0053|consen 289 LLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN---EEHAKKFYDALKLFTKAPSLGGNESLAEPPAIM 365 (409)
T ss_pred HHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC---HHHHHHHHHhhhhhhcccCcCccchhhcchhhh
Confidence 4444431 011100 01222 233333333332 345556665554 2232222 1
Q ss_pred -------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 248 -------------THDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 248 -------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..++-||+|.. -|+++.+++.|.++++
T Consensus 366 th~~~~e~~~~~Gi~~~LVRvSVG----iEd~~dL~~d~~~Al~ 405 (409)
T KOG0053|consen 366 THASELEEREKFGIDPNLVRVSVG----IEDIEDLIKDFQQALE 405 (409)
T ss_pred ccCCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHH
Confidence 13689999954 4778888888888887
No 329
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.33 E-value=8.4e-11 Score=104.22 Aligned_cols=217 Identities=14% Similarity=0.199 Sum_probs=126.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|.+.+++.|+ ++|++|.|..++|+.|...| +++|.++|+++++.+++|.+|+ .|+ ...+.-++++|+.
T Consensus 170 d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa----vG~-i~vDV~eln~D~~ 237 (428)
T KOG1549|consen 170 DISKLREAIR---SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA----VGK-IPVDVQELNADFL 237 (428)
T ss_pred cHHHHHHhcC---CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh----cCC-ccccHHHcCchhe
Confidence 6889999998 79999999999999999999 9999999999999999999998 333 2245556788888
Q ss_pred Eec--ccccCCcccceeeEeCHHHHhhcC--CCCcc----C---CCCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHHHH
Q 021893 126 ILG--KALGGGVIPVSAVLADKEVMLCIQ--PGEHG----S---TFGGNPLASAVAIASLDVIRDEK--LAERSAHLGEE 192 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~--~~~~~----~---~~~~~~~~~~aa~~al~~~~~~~--~~~~~~~~~~~ 192 (306)
+++ |++++- ++|+++++++ ...++ +...+ . .-+.+.+.+...-++.+...... ...++.++...
T Consensus 238 s~s~HK~ygp~--~iGaLYvr~~-~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ 314 (428)
T KOG1549|consen 238 SISAHKIYGPP--GIGALYVRRK-RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEK 314 (428)
T ss_pred eeecccccCCC--cceEEEEccC-CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHH
Confidence 776 988832 2677888762 12222 11000 0 11224445555556666665421 22333333333
Q ss_pred HHHHHHHHHhhCCCcee---eEEEeeeEEEEEEecCCChhhHHHH------------------HHHHHHCCceeccCCCC
Q 021893 193 LRQHLFKIQQQFPNYVK---EVRGRGLFNAVEFDKTALPVSAYDI------------------CLKMKERGILAKPTHDT 251 (306)
Q Consensus 193 l~~~L~~~~~~~~~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~------------------~~~l~~~Gi~~~~~~~~ 251 (306)
+...+.. ..++... ...-...++.+.++.........++ .-.++..|+..... ..
T Consensus 315 ll~~i~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~-~~ 390 (428)
T KOG1549|consen 315 LLMGIGQ---SLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLA-HS 390 (428)
T ss_pred HHHHHhh---hCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhh-cc
Confidence 3332222 1111100 0000122222323300000001111 12222333322222 46
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 252 IVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.+||+...+++++|++++.+.+.+..+ .+.
T Consensus 391 ~iRis~G~y~t~~di~~~~~~i~~~v~-~~~ 420 (428)
T KOG1549|consen 391 SIRISIGRYTTEEDIDYLVDAIKKLVS-LLR 420 (428)
T ss_pred eeEEeeeeeCcHHHHHHHHHHHHHHHH-hcc
Confidence 899999999999999999999999887 543
No 330
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.32 E-value=2.1e-11 Score=111.97 Aligned_cols=90 Identities=19% Similarity=0.223 Sum_probs=67.6
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+.+++.+|+++++++|+ ++|++|+++.+.|++|.+++ +++|.++|+++|+++|+|++|+- +.. ....
T Consensus 131 v~~vd~~d~~~l~~~i~---~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~----~~~--~~pl 197 (433)
T PRK08134 131 TTFVKPGDIDGWRAAIR---PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTT----PYL--LRPF 197 (433)
T ss_pred EEEECCCCHHHHHHhcC---CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCcc----ccc--CCch
Confidence 35566668999999998 57999999999999999999 99999999999999999999961 111 1112
Q ss_pred CCCCcEE--EecccccC-CcccceeeE
Q 021893 119 EVRPDMV--ILGKALGG-GVIPVSAVL 142 (306)
Q Consensus 119 ~~~~d~~--s~sK~~~~-G~~~~g~~~ 142 (306)
.+..|++ |..|.++| |- .+|.++
T Consensus 198 ~~GaD~vv~S~tK~l~g~g~-~~gG~v 223 (433)
T PRK08134 198 EHGADLVYHSATKFLGGHGT-AIGGVL 223 (433)
T ss_pred hcCCCEEEeccccccCCCCC-ceEEEE
Confidence 3455665 55598883 43 344443
No 331
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.32 E-value=1.9e-10 Score=104.47 Aligned_cols=216 Identities=16% Similarity=0.201 Sum_probs=127.3
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCC--
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEV-- 120 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~-- 120 (306)
.|++.+++.+++++ +++++|++.+ .+|...+ +++|.++|++||++||+|++|+ |....+.. .+.
T Consensus 105 ~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~-----~g~~~ 172 (380)
T TIGR03588 105 IDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALAKKHGLKIIEDASHALGAEYGGKP-----VGNCR 172 (380)
T ss_pred cCHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHHHHcCCEEEEECCCcccCccCCEe-----CCCcc
Confidence 37899999997432 2577777543 3576666 9999999999999999999998 22122221 222
Q ss_pred CCcEEEec----ccccCCcccceeeEe-CHHHHhhcCCCCc-------------------------cCCCCCCHHHHHHH
Q 021893 121 RPDMVILG----KALGGGVIPVSAVLA-DKEVMLCIQPGEH-------------------------GSTFGGNPLASAVA 170 (306)
Q Consensus 121 ~~d~~s~s----K~~~~G~~~~g~~~~-~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~aa 170 (306)
.-|+.++| |.++.| ..|+++. ++++.+.++.... +..+..+.+..+.+
T Consensus 173 ~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g 250 (380)
T TIGR03588 173 YADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALG 250 (380)
T ss_pred ccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHH
Confidence 23665444 888744 2333554 5666665432100 00112233444444
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-
Q 021893 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT- 248 (306)
Q Consensus 171 ~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~- 248 (306)
...++.+ ++..++.+++.+++.+.|..+....+.... .......+..+.+... ......++.+.|.++||.++..
T Consensus 251 ~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~r~~l~~~L~~~gI~~~~~~ 327 (380)
T TIGR03588 251 LSQLKKL--DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE-FGCTRKEVFEALRAAGIGVQVHY 327 (380)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc-CCCCHHHHHHHHHHCCCCcccCC
Confidence 4445443 345667777778888888765211000000 0011222333334321 1245788999999999887621
Q ss_pred ---C---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 ---H---------------------DTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 ---~---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
. ...+++-++...+++|++..++.|++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 328 IPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred cccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 0 1567777777789999999999998764
No 332
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.30 E-value=2.3e-10 Score=99.71 Aligned_cols=222 Identities=16% Similarity=0.193 Sum_probs=131.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHH-HHHcCCEEEEehhhh--ccccccc-cc--c----
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILMIADEIQS--GLARSGR-ML--A---- 114 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l-~~~~gi~li~De~~~--g~~~~g~-~~--~---- 114 (306)
+|++.+|+++.+. +.++.+.|.|.+++...++.+.|-.+++..+ +.+.|..+++|++|+ .+..... .. .
T Consensus 158 PDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~ 236 (425)
T PF12897_consen 158 PDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDA 236 (425)
T ss_dssp E-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHH
T ss_pred CCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHH
Confidence 4899999999765 6799999999765544467799999999999 557999999999998 2211111 00 0
Q ss_pred cccCCCCCc----EEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-c-cHHHHHHH
Q 021893 115 SDWEEVRPD----MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-E-KLAERSAH 188 (306)
Q Consensus 115 ~~~~~~~~d----~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~-~~~~~~~~ 188 (306)
+...| .|| +.|+||---+|- +++++.++++-++.++......+...+-+.+..-. +.+.+ + ++.+|+++
T Consensus 237 ~~~AG-npdrv~~F~STSKITf~Ga-Gva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHv---rff~d~~gGv~aHM~k 311 (425)
T PF12897_consen 237 CAKAG-NPDRVYVFASTSKITFPGA-GVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHV---RFFKDAEGGVRAHMRK 311 (425)
T ss_dssp HHHTT--TTSEEEEEESTTTS-TTS-S-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHH---HHHHSHHTHHHHHHHH
T ss_pred HHHcC-CCCeEEEEecccccccCCc-ceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHH---HHhcChhhHHHHHHHH
Confidence 11112 233 458999666776 89999999988877765444444455555554433 33443 4 68888888
Q ss_pred HHHHHHHHHHHHH----hhCC---Ccee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CC
Q 021893 189 LGEELRQHLFKIQ----QQFP---NYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HD 250 (306)
Q Consensus 189 ~~~~l~~~L~~~~----~~~~---~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~ 250 (306)
.++.++-+.+... ..+. +... ..+..|.+++++..+ ..+..+.+.+.+.||.+.|. .+
T Consensus 312 Ha~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~----G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D 387 (425)
T PF12897_consen 312 HAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD----GTAKRVVELAKEAGVALTPAGATFPYGKDPRD 387 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST----T-HHHHHHHHHHTTEE---TTTTSGGG--TTS
T ss_pred HHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC----ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCC
Confidence 8888876554422 1111 2333 344577778888774 57889999999999999974 25
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
..||++|+ ..+.+|++.+++.+.-..
T Consensus 388 ~nIRiAPS-~P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 388 SNIRIAPS-YPSLEELETAMDVFATCV 413 (425)
T ss_dssp -EEEE--S-SS-HHHHHHHHHHHHHHH
T ss_pred CcEEecCC-CCCHHHHHHHHHHHHHHH
Confidence 78999986 558899999988885544
No 333
>PLN02880 tyrosine decarboxylase
Probab=99.28 E-value=1.5e-10 Score=107.84 Aligned_cols=227 Identities=12% Similarity=0.065 Sum_probs=139.4
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|++.|++.|++. +..+.+|+.+.....+|.+-| +++|.++|++||+++++|.+|+|+...-..+.....++ .
T Consensus 222 d~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~ 297 (490)
T PLN02880 222 APELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEE 297 (490)
T ss_pred CHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchh
Confidence 799999999852 334677778778888898888 99999999999999999999987422111111112333 4
Q ss_pred CcEEEec--ccccCCcccceeeEeCHH--HHhhcCCCC----c-----cCC-----C---CCCHHHHHHHHHHHHHHhhc
Q 021893 122 PDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPGE----H-----GST-----F---GGNPLASAVAIASLDVIRDE 180 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~~~~----~-----~~~-----~---~~~~~~~~aa~~al~~~~~~ 180 (306)
+|.+++. |.+...+ .+|+++.+.. +.+.+.... . ... + .+-.........+++.+..+
T Consensus 298 aDSit~d~HKwl~~P~-~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~ 376 (490)
T PLN02880 298 ADSFNMNAHKWFLTNF-DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVE 376 (490)
T ss_pred cCEEEECchhhcCCCc-cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHH
Confidence 5766554 9999888 8998887632 222221110 0 000 0 11111233444556666667
Q ss_pred cHHHHHH---HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-----hhhHHHHHHHHHHCC-ceecc---C
Q 021893 181 KLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERG-ILAKP---T 248 (306)
Q Consensus 181 ~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-----~~~~~~~~~~l~~~G-i~~~~---~ 248 (306)
++.++++ ++.+++.+.|++.. +.....+....++.|.+++... ......+.+.|.+.| +.+.. .
T Consensus 377 g~~~~i~~~~~lA~~~~~~l~~~~----~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~ 452 (490)
T PLN02880 377 NLQSYIRNHIKLAKEFEQLVAQDS----RFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLS 452 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC----CEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEEC
Confidence 7777777 77777766665532 1222222233445555553210 111245667777665 44443 2
Q ss_pred CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHhhhcC
Q 021893 249 HDTIVRLTPPLSI-SSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 249 ~~~~lRi~~~~~~-t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+..++|+++.... +++|++.+++.|.+..+ ++.
T Consensus 453 g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~-~~~ 486 (490)
T PLN02880 453 GKYVLRFAVGAPLTEERHVTAAWKVLQDEAS-KLL 486 (490)
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 5678999986555 56999999999998887 653
No 334
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.27 E-value=5.4e-11 Score=109.23 Aligned_cols=212 Identities=15% Similarity=0.191 Sum_probs=123.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++.++++++ +++++|+++.+.|++|.+.+ +++|.++|+++|+++|+|.+++. |... ....+..|+
T Consensus 143 ~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~----g~~~--~p~~~GaDi 209 (437)
T PRK05613 143 DDPESWQAAVQ---PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT----AALV--RPLELGADV 209 (437)
T ss_pred CCHHHHHHhCC---ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc----cccc--ChHHhCCCE
Confidence 47899999988 56889999998888888888 99999999999999999999862 2211 111233465
Q ss_pred E--EecccccC-Cccccee-eEeCHHHH-hh------c-----C------------------------CCCccCCCCCCH
Q 021893 125 V--ILGKALGG-GVIPVSA-VLADKEVM-LC------I-----Q------------------------PGEHGSTFGGNP 164 (306)
Q Consensus 125 ~--s~sK~~~~-G~~~~g~-~~~~~~~~-~~------~-----~------------------------~~~~~~~~~~~~ 164 (306)
+ |+.|.++| |- .+|. ++.+.++. .. . . ..........++
T Consensus 210 vv~S~~K~l~G~gd-~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p 288 (437)
T PRK05613 210 VVASLTKFYTGNGS-GLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSP 288 (437)
T ss_pred EEeeccceecCCCc-ceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCH
Confidence 5 56699985 44 4444 44333211 00 0 0 000011223344
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee---------e-EEEeeeEEEEEEecCCChhh
Q 021893 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------E-VRGRGLFNAVEFDKTALPVS 230 (306)
Q Consensus 165 ~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~---------~-~~~~g~~~~i~~~~~~~~~~ 230 (306)
..+..+...++.+... .++..++...+.+.|++... .+|+... . ..+.|.++.|++... ...
T Consensus 289 ~~a~l~~rgl~TL~lR--~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~--~~~ 364 (437)
T PRK05613 289 FNAWVTAQGLDTLSLR--LERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGG--KDE 364 (437)
T ss_pred HHHHHHHcccCcHHHH--HHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCC--HHH
Confidence 5555455545444332 45666677777777776421 1121110 1 134578889988631 233
Q ss_pred HHHHHHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 231 AYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 231 ~~~~~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
...|++.|.=-.+.++ |. .++.||++.. -|+.+.+++.|+++++
T Consensus 365 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvG----lE~~~dLi~Dl~~Al~ 435 (437)
T PRK05613 365 AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVG----IEDIDDIIADLEGGFA 435 (437)
T ss_pred HHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 4455555532111111 10 2578999944 3567777888877776
No 335
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.25 E-value=3.5e-11 Score=105.47 Aligned_cols=145 Identities=14% Similarity=0.087 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d 123 (306)
.|+++++++++++ +++++++++.+ +++|...+ +++|.++|+++|+++++||+|+. +...+. +.........|
T Consensus 140 i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~~~~~-~~~~~~~~~~d 212 (294)
T cd00615 140 IPPETFKKALIEH-PDAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFRFHPI-LPSSAAMAGAD 212 (294)
T ss_pred CCHHHHHHHHHhC-CCceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhhccCcc-cCcchhhcCCc
Confidence 4899999999865 45676666654 46888887 99999999999999999999974 222222 11222223445
Q ss_pred EE--EecccccCCcccc-eeeEeCHHHH--hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGGGVIPV-SAVLADKEVM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQ 195 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~-g~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~ 195 (306)
++ |++|.++ |+ +. |++..+.+.. +++... ....+.+++.+.+++...+++.+.. +++.++..++.+.+++
T Consensus 213 iv~~S~hK~l~-g~-~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~ 290 (294)
T cd00615 213 IVVQSTHKTLP-AL-TQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQ 290 (294)
T ss_pred EEEEchhcccc-hH-hHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 54 7779884 44 43 3454544311 122111 1223344566667777777777643 3355666666666666
Q ss_pred HHH
Q 021893 196 HLF 198 (306)
Q Consensus 196 ~L~ 198 (306)
.++
T Consensus 291 ~l~ 293 (294)
T cd00615 291 EIN 293 (294)
T ss_pred HHh
Confidence 554
No 336
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=5.3e-10 Score=99.37 Aligned_cols=212 Identities=19% Similarity=0.257 Sum_probs=130.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++.+|++|+ ++|++|+..+.. |..++ +++|.++|++||++||.|.+|+ |--+.|. ..|-.-|+
T Consensus 111 d~~~ie~aIt---~~tKAIipVhl~---G~~~d----m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk-----~vGt~Gd~ 175 (374)
T COG0399 111 DPDLIEAAIT---PRTKAIIPVHLA---GQPCD----MDAIMALAKRHGLPVIEDAAQAHGATYKGK-----KVGSFGDI 175 (374)
T ss_pred CHHHHHHHcc---cCCeEEEEehhc---cCCCC----HHHHHHHHHHcCCeEEEEcchhccCeecCc-----ccccccce
Confidence 8999999999 569999988876 44566 9999999999999999999998 3323333 22333477
Q ss_pred EEec----ccccCCcccceeeEe-CHHHHhhcCCCC-ccC---------------CCCCCHHHHHHHHHHHHHHhhccHH
Q 021893 125 VILG----KALGGGVIPVSAVLA-DKEVMLCIQPGE-HGS---------------TFGGNPLASAVAIASLDVIRDEKLA 183 (306)
Q Consensus 125 ~s~s----K~~~~G~~~~g~~~~-~~~~~~~~~~~~-~~~---------------~~~~~~~~~~aa~~al~~~~~~~~~ 183 (306)
.+|| |.++.|= -|.++. ++++.++++... |+. .+..+.+.++..+..|+.+ +++.
T Consensus 176 ~~fSF~~~K~ittgE--GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~ 251 (374)
T COG0399 176 GAFSFHATKNLTTGE--GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERL--DEIN 251 (374)
T ss_pred EEEEecCCCCccccC--ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHH--HHHH
Confidence 7666 9888431 223665 477776664320 111 1122334444444444433 4456
Q ss_pred HHHHHHHHHHHHHHHHHHh-hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCce----eccC----------
Q 021893 184 ERSAHLGEELRQHLFKIQQ-QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL----AKPT---------- 248 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~----~~~~---------- 248 (306)
++-+++.+...+.|+.+.. ..|.........-.++.+.+++. +.+-..+.+.|.++||. ..|.
T Consensus 252 ~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~--~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~ 329 (374)
T COG0399 252 ERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE--GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLG 329 (374)
T ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC--CCCHHHHHHHHHhCCCCceEEeeccccchhhhccc
Confidence 6666666777777766531 11111111122233334444431 24567899999999654 3331
Q ss_pred -------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
....+++=+....+.+++++.++.|++++.
T Consensus 330 ~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 330 YFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred ccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 124566655667899999999999998876
No 337
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.24 E-value=7.6e-10 Score=102.02 Aligned_cols=213 Identities=15% Similarity=0.196 Sum_probs=124.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++.+++.++ +++++|+++++. |...+ +++|.++|++||++||+|++|+ |--..|.. ...+| |+
T Consensus 148 d~~~le~~i~---~~tkaVi~~~~~---G~p~d----l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~--~G~~g---d~ 212 (438)
T PRK15407 148 DASLLEAAVS---PKTKAIMIAHTL---GNPFD----LAAVKAFCDKHNLWLIEDNCDALGSTYDGRM--TGTFG---DI 212 (438)
T ss_pred CHHHHHHHcC---cCCeEEEEeCCC---CChhh----HHHHHHHHHHCCCEEEEECccchhhhcCCee--eeccC---ce
Confidence 7899999887 578888888753 43444 9999999999999999999998 32223321 22223 55
Q ss_pred EEec----ccccCCcccceeeEeC-HHHHhhcCCC---C------------------------------------ccCCC
Q 021893 125 VILG----KALGGGVIPVSAVLAD-KEVMLCIQPG---E------------------------------------HGSTF 160 (306)
Q Consensus 125 ~s~s----K~~~~G~~~~g~~~~~-~~~~~~~~~~---~------------------------------------~~~~~ 160 (306)
.+|| |.+..|- + |+++.+ +++.+.++.. . .+..+
T Consensus 213 ~~fSf~~~k~~~~ge-G-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~ 290 (438)
T PRK15407 213 ATLSFYPAHHITMGE-G-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNL 290 (438)
T ss_pred EEEeCCCCCCccccC-c-eEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccccc
Confidence 5554 6676553 3 567775 4444332211 0 01112
Q ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh--hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHH
Q 021893 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ--QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 238 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l 238 (306)
..+.+.++.++..|+.+ ++..++-+++.+++.+.|..... ..+............+.+.+.+. ...+..++.+.|
T Consensus 291 rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Rd~l~~~L 367 (438)
T PRK15407 291 KITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKED-AGFTRVELVKYL 367 (438)
T ss_pred CccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCc-CCCCHHHHHHHH
Confidence 33455566666666555 33466666777777777765321 11100011112223344444321 123467899999
Q ss_pred HHCCceeccCC----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 239 KERGILAKPTH----------------------------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 239 ~~~Gi~~~~~~----------------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++||.+++.. ...+-+=++...+++|++..++.|+++++
T Consensus 368 ~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 368 EENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999765210 01122222344689999999999988765
No 338
>PLN03032 serine decarboxylase; Provisional
Probab=99.21 E-value=4.8e-09 Score=94.34 Aligned_cols=205 Identities=14% Similarity=0.079 Sum_probs=132.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC-----CEEEEehhhhccccc----ccccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-----ILMIADEIQSGLARS----GRMLASD 116 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g-----i~li~De~~~g~~~~----g~~~~~~ 116 (306)
|+++|+++|+++..++.+|+++..++.+|.+.| +++|.++|++|| +++++|.+++|+-.. ...+.+.
T Consensus 147 d~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~ 222 (374)
T PLN03032 147 DYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR 222 (374)
T ss_pred cHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC
Confidence 799999999865446888899999999999988 999999999997 589999999863111 0111111
Q ss_pred cCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCc-----cCCCCC--CHHHHHHHHHHHHHHhhccH---HH
Q 021893 117 WEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-----GSTFGG--NPLASAVAIASLDVIRDEKL---AE 184 (306)
Q Consensus 117 ~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~aa~~al~~~~~~~~---~~ 184 (306)
...|.+++| |.++..+ ++|.++.+++.++.+..... ..+..+ +....+.+..+++.+..+++ .+
T Consensus 223 ---~~vDSis~s~HK~~g~P~-g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~ 298 (374)
T PLN03032 223 ---KPIGSVSVSGHKFLGCPM-PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQ 298 (374)
T ss_pred ---cCCcEEEECcccccCCCc-CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHH
Confidence 246777776 8776677 88989998777665532111 112222 33456667777777766554 55
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHH
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN 264 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~ 264 (306)
+..++.+++.+.|++.. .........+.+.+..+. ... +.+|-.+.+. .+.+|++.+..++++
T Consensus 299 ~~~~~a~~l~~~l~~~~-----~~~~~~p~~~~V~f~~~~------~~~-----~~~~w~l~~~-~~~~hi~vm~~~~~~ 361 (374)
T PLN03032 299 HCMRNAHYLKDRLTEAG-----LTCRLNELSSTVVFERPM------DEA-----FIKKWQLACE-GDIAHVVVMPNVTVE 361 (374)
T ss_pred HHHHHHHHHHHHHHhCC-----CcEEECCCceEEEEcCCC------cHh-----Hhheeeeccc-CCEEEEEECCCCCHH
Confidence 56667777777776642 222222233333332221 111 2245555543 458999988888899
Q ss_pred HHHHHHHHHHH
Q 021893 265 ELQEGSKALHD 275 (306)
Q Consensus 265 ~i~~~~~~l~~ 275 (306)
.++++++.|++
T Consensus 362 ~id~fi~dl~~ 372 (374)
T PLN03032 362 KLDEFVEELVE 372 (374)
T ss_pred HHHHHHHHHhc
Confidence 99999988764
No 339
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.20 E-value=4.2e-09 Score=87.37 Aligned_cols=216 Identities=18% Similarity=0.260 Sum_probs=135.4
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL 127 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~ 127 (306)
+.+|+..++-++.+++.++.++.+++|.+.+ -+.+.++|++||++++...+|+ .|.. +.+.-++.+|++.-
T Consensus 144 ~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt----~Grm-pvs~ke~g~DFiVg 214 (382)
T COG1103 144 EVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT----VGRM-PVSGKEIGADFIVG 214 (382)
T ss_pred HHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee----eccc-cccccccCCCEEEe
Confidence 3344444444466999999999999999988 9999999999999999999998 2221 13344567887755
Q ss_pred c--ccccCCcccceeeEeCHHHHhhc-CCC----------CccCCCCC-CHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 021893 128 G--KALGGGVIPVSAVLADKEVMLCI-QPG----------EHGSTFGG-NPLASAVAIASLDVIRD--EKLAERSAHLGE 191 (306)
Q Consensus 128 s--K~~~~G~~~~g~~~~~~~~~~~~-~~~----------~~~~~~~~-~~~~~~aa~~al~~~~~--~~~~~~~~~~~~ 191 (306)
| |+++..- |+|.+..+++..+.. +.. ..+.+..+ +.+.+.|. +-...+ .+ .+.-.+..+
T Consensus 215 SGHKsmAAs~-PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmAS---fP~V~eRVkr-WdeEv~kaR 289 (382)
T COG1103 215 SGHKSMAASA-PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMAS---FPHVVERVKR-WDEEVEKAR 289 (382)
T ss_pred cCccchhccC-CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhc---CHHHHHHHHH-HHHHHHHHH
Confidence 5 9998655 899999998876643 321 11112222 22233332 222211 11 233345667
Q ss_pred HHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCce-eccCCCCEEEEeCCCCCCHHH
Q 021893 192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGIL-AKPTHDTIVRLTPPLSISSNE 265 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~-~~~~~~~~lRi~~~~~~t~~~ 265 (306)
++.+.|++++... ..-..+..--+..|+.+.-. ......-+.+.|.++||. +.|+-..++.++. +..+.++
T Consensus 290 ~fv~elEkigg~~--qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~Eq 366 (382)
T COG1103 290 WFVAELEKIGGVK--QLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSWEQ 366 (382)
T ss_pred HHHHHHHHhhhHH--HhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEe-ecCCHHH
Confidence 8888888886221 11111111112233333100 011122368889999887 6677788999985 6789999
Q ss_pred HHHHHHHHHHHHhhhc
Q 021893 266 LQEGSKALHDVLELDL 281 (306)
Q Consensus 266 i~~~~~~l~~~l~~~~ 281 (306)
++..+++++++++ ++
T Consensus 367 ve~V~~afkeI~e-ky 381 (382)
T COG1103 367 VEYVVDAFKEIAE-KY 381 (382)
T ss_pred HHHHHHHHHHHHH-hc
Confidence 9999999999987 54
No 340
>PLN02590 probable tyrosine decarboxylase
Probab=99.20 E-value=7.8e-09 Score=96.85 Aligned_cols=230 Identities=11% Similarity=0.080 Sum_probs=139.2
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|++.|+++|++. +..+.+|+.+.....+|.+=| |++|.++|++||++|.+|.+|+|+...-..+..-..++ .
T Consensus 270 d~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ 345 (539)
T PLN02590 270 PPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN 345 (539)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc
Confidence 799999999752 234677777777888888877 99999999999999999999997532211111111232 3
Q ss_pred CcEEEec--ccccCCcccceeeEeCHH--HHhhcCCC------C--------ccCCC---CCCHHHHHHHHHHHHHHhhc
Q 021893 122 PDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG------E--------HGSTF---GGNPLASAVAIASLDVIRDE 180 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~~~------~--------~~~~~---~~~~~~~~aa~~al~~~~~~ 180 (306)
+|-+++. |.+...+ .+|.++.+.. +.+.+... . ....+ .+-.......+.+++.+..+
T Consensus 346 ADSit~D~HK~l~~p~-~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~ 424 (539)
T PLN02590 346 ADSFNMNAHKWLFANQ-TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSE 424 (539)
T ss_pred CCEEEECchhhcCcCc-CEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHH
Confidence 4655554 9998888 8888877643 22222110 0 00011 11223455566777777666
Q ss_pred cHHHHHH---HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-C----hhhHHHHHHHHHHCCce-eccC---
Q 021893 181 KLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-L----PVSAYDICLKMKERGIL-AKPT--- 248 (306)
Q Consensus 181 ~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-~----~~~~~~~~~~l~~~Gi~-~~~~--- 248 (306)
++.++++ ++.+++.+.|++. +......+..-..+.|.+.+.. . ......+.+.+.+.|.. +++.
T Consensus 425 G~~~~i~~~~~lA~~~~~~l~~~----~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~ 500 (539)
T PLN02590 425 NLRNFIRDHVNLAKHFEDYVAQD----PSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALS 500 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEEC
Confidence 5554444 4555555555443 2222222222233334333211 0 12234677777777744 4432
Q ss_pred CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893 249 HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPKMR 285 (306)
Q Consensus 249 ~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~~~ 285 (306)
+..+||+++ +..++++|++.+++.|.+... ++.+++
T Consensus 501 g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~-~~~~~~ 537 (539)
T PLN02590 501 GKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS-KFTRND 537 (539)
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HhcccC
Confidence 456899987 456789999999999999988 887654
No 341
>PRK04311 selenocysteine synthase; Provisional
Probab=99.20 E-value=3.7e-09 Score=97.60 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=134.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCC--CC--cccCChhHHHHHHHHHHHcCCEEEEehhhhccc---cc---ccccc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGE--AG--VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA---RS---GRMLA 114 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~--~G--~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~---~~---g~~~~ 114 (306)
.++++++++|+ ++|+++++++..|+ .| ..++ +++|.++|++||+++++|...+-++ .. +.+..
T Consensus 204 t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~ 276 (464)
T PRK04311 204 THLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTV 276 (464)
T ss_pred CCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCch
Confidence 46889999997 57899998888775 34 4567 9999999999999999999643221 11 11111
Q ss_pred cccCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccH--------
Q 021893 115 SDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKL-------- 182 (306)
Q Consensus 115 ~~~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~-------- 182 (306)
.+.....+|++++| |.++|. ..|++++++++++.++...........-..+++..+++....+ +.+
T Consensus 277 ~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~ 354 (464)
T PRK04311 277 QELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRL 354 (464)
T ss_pred hhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHH
Confidence 12233567888777 988754 5788999999998877533322333334455555555553321 111
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhCCCceeeEE------EeeeE-------EEEEEecCCChhhHHHHHHHHHHC--Cc
Q 021893 183 ----AERSAHLGEELRQHLFKIQQQFPNYVKEVR------GRGLF-------NAVEFDKTALPVSAYDICLKMKER--GI 243 (306)
Q Consensus 183 ----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~------~~g~~-------~~i~~~~~~~~~~~~~~~~~l~~~--Gi 243 (306)
.++..++...+.+.|+..... +....+. +.|.+ +.+.+... .....++.+.|++- .|
T Consensus 355 l~~~~~~~~~~A~~la~~L~~~~~~--~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~--~~~~~~l~~~lr~~~~~i 430 (464)
T PRK04311 355 LTRSPEELRARAERLAAALKAALGA--AFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK--DRSLEALAARLRLLPPPV 430 (464)
T ss_pred hcCCHHHHHHHHHHHHHHHHhccCC--CeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC--CCCHHHHHHHHhcCCCCE
Confidence 255556667777777664311 0111111 12222 22333321 24567888888875 46
Q ss_pred eeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 244 ~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.+. ..+.+.+-+- ...++|++.++++|++++.
T Consensus 431 ~~r~-~~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 431 IGRI-EDGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred EEEE-ECCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 6653 3667778763 5578899999999988764
No 342
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.19 E-value=1.9e-09 Score=90.85 Aligned_cols=262 Identities=15% Similarity=0.114 Sum_probs=165.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVI 76 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~ 76 (306)
|-||+.-+++|..+.++.-+.-- .++..|...-+.+-|.. ..+++-..|+.+++.+++|+.+.++..+|..
T Consensus 155 R~KILlE~kaFPSDhYAiesQ~~----lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~ 230 (465)
T KOG3846|consen 155 RFKILLEKKAFPSDHYAIESQCK----LHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQY 230 (465)
T ss_pred hhhhhhccCCCCchHHHHHhhhh----hcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccc
Confidence 34777778888777766544322 11111111111111111 3566677888888999999999999999999
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC--
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-- 154 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~-- 154 (306)
.+ +.+|...-+..|+++-+|-+|+ + ...++....|+++.-+.|..|.+..|-..+|.+...++..+..++.
T Consensus 231 Fd----i~aIT~Agq~kgc~VGfDLAHA-v--gNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~ 303 (465)
T KOG3846|consen 231 FD----IGAITFAGQFKGCLVGFDLAHA-V--GNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLA 303 (465)
T ss_pred cc----hhhhhhcccCCCcEechhhhhh-h--cCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHh
Confidence 99 9999988899999999999997 2 1133445566665556677798874333556555555443332221
Q ss_pred ----------------------CccCCCCC-CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCc----
Q 021893 155 ----------------------EHGSTFGG-NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNY---- 207 (306)
Q Consensus 155 ----------------------~~~~~~~~-~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~---- 207 (306)
..+...+. +.+..++...+++....-. .+.++++.-.+..-|+.+....-+.
T Consensus 304 GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~k~~~g~~~~~ 382 (465)
T KOG3846|consen 304 GWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLLKASKGYKHPL 382 (465)
T ss_pred hhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHHHHHHHhcccCchh
Confidence 11111122 3345566667777765522 3444444444444444433111000
Q ss_pred -----------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeC-CCCCCHHHHHHHHHHHHH
Q 021893 208 -----------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSISSNELQEGSKALHD 275 (306)
Q Consensus 208 -----------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~ 275 (306)
.......|.-+.+.+.. ....+.+.|.++|+++....++.||++| +++++-.|+..++..|.+
T Consensus 383 rt~Kl~~~IiTP~~~~erGcQLsl~Fss-----p~~~vfqeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e 457 (465)
T KOG3846|consen 383 RTEKLFFTIITPTSTDERGCQLSLYFSS-----PTPKVFQELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNE 457 (465)
T ss_pred hhcceeEEEeCCcccccccceEEEEeCC-----CchHHHHHHHHcCeeccccCCCceEeecchhhccHHHHHHHHHHHHH
Confidence 01223345555555553 2357899999999999999999999999 789999999999999999
Q ss_pred HHhhhc
Q 021893 276 VLELDL 281 (306)
Q Consensus 276 ~l~~~~ 281 (306)
++. .+
T Consensus 458 ~~d-~~ 462 (465)
T KOG3846|consen 458 AMD-KL 462 (465)
T ss_pred HHH-Hh
Confidence 887 54
No 343
>PLN02271 serine hydroxymethyltransferase
Probab=99.18 E-value=6.5e-09 Score=96.16 Aligned_cols=214 Identities=14% Similarity=0.085 Sum_probs=133.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|.+++++.... .++++|++....++ ...+ +++++++|+++|++|++|.+|. |+...|. +..+.. ..|+
T Consensus 286 Dyd~lek~a~~--~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-~~sP~~--~aDv 354 (586)
T PLN02271 286 DYDKLEEKALD--FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISGLVAAKE-CVNPFD--YCDI 354 (586)
T ss_pred CHHHHHHHhhh--cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECcccccccccCc-CCCCCc--CCcE
Confidence 78999986554 57999999776555 3566 9999999999999999999998 6533332 211222 3577
Q ss_pred EEec--ccccCCcccceeeEeCHH--------------------HHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh--
Q 021893 125 VILG--KALGGGVIPVSAVLADKE--------------------VMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~~~--------------------~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~-- 179 (306)
++++ |++.|.. + |++..+++ +.+++.....-....+ ..-.+++...+++.+..
T Consensus 355 vt~TTHKtLrGPr-G-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~e 432 (586)
T PLN02271 355 VTSTTHKSLRGPR-G-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPE 432 (586)
T ss_pred EEeCCcccCCCCC-c-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChH
Confidence 7554 9997654 3 66776654 2222322111111111 11234444566666544
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----C
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----H 249 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~ 249 (306)
.++.+++.++.+.|.+.|.+.+.. .+ .-.-...++++++.+ .+.......+.|-+-||.+-. + .
T Consensus 433 fk~Ya~QVv~NAkaLA~~L~~~G~~---vv-~ggTdnHlvLvDl~~--~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~ 506 (586)
T PLN02271 433 YKAYMQQVKKNAQALASALLRRKCR---LV-TGGTDNHLLLWDLTT--LGLTGKNYEKVCEMCHITLNKTAIFGDNGTIS 506 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCe---Ee-eCCCCcceeeecCcc--cCCCHHHHHHHHHHcCeEeccccCCCCCCCCC
Confidence 346778888888888888876422 11 111245566777654 233555666666667888752 2 2
Q ss_pred CCEEEEeCCC----CCCHHHHHHHHHHHHHHHh
Q 021893 250 DTIVRLTPPL----SISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 ~~~lRi~~~~----~~t~~~i~~~~~~l~~~l~ 278 (306)
++.||+..+. ...++|+++..+.|.++++
T Consensus 507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 4568988653 3556888888888888876
No 344
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.14 E-value=1.1e-08 Score=94.24 Aligned_cols=214 Identities=19% Similarity=0.188 Sum_probs=127.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCC--C--cccCChhHHHHHHHHHHHcCCEEEEehhhhccccc------ccccc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEA--G--VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS------GRMLA 114 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~--G--~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~------g~~~~ 114 (306)
.|+++++++|+ ++|+++++++..|.+ | ..++ +++|.++|++||+++++|.+.+-++.. ..+..
T Consensus 199 ~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~ 271 (454)
T TIGR00474 199 THLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTV 271 (454)
T ss_pred CCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCccc
Confidence 46889999887 579999988887653 5 4677 999999999999999999753212111 11111
Q ss_pred cccCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-c-cH--------
Q 021893 115 SDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-E-KL-------- 182 (306)
Q Consensus 115 ~~~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~-~~-------- 182 (306)
.+.....+|++++| |.++|. ..|+++++++.++.++...........-+.+++..+++....+ + .+
T Consensus 272 ~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~ 349 (454)
T TIGR00474 272 QEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRM 349 (454)
T ss_pred ccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHH
Confidence 22334567899888 998654 4688999999888776532222222223334444444444322 1 01
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhCCCceeeEE------EeeeE-------EEEEEecCCChhhHHHHHHHHHHCC--c
Q 021893 183 ----AERSAHLGEELRQHLFKIQQQFPNYVKEVR------GRGLF-------NAVEFDKTALPVSAYDICLKMKERG--I 243 (306)
Q Consensus 183 ----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~------~~g~~-------~~i~~~~~~~~~~~~~~~~~l~~~G--i 243 (306)
.++..++...+.+.|+..... +....+. +.|.+ +.+.+.. ......++.+.|++.. |
T Consensus 350 l~~~~~~~~~~A~~la~~L~~~~~~--~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~--~~~~~~~l~~~lr~~~~~i 425 (454)
T TIGR00474 350 LTQSPEELRARAERLAKRLKAALGP--GFELEIVPGLSQVGGGSLPDERLPSYAVTLTP--DGLSAEKLEARLRELPPPI 425 (454)
T ss_pred hccCHHHHHHHHHHHHHHHHhhccC--CceEEEEEcCCcccCCCCcCCCCCeEEEEEec--CCCCHHHHHHHHhcCCCCE
Confidence 235556677777777664211 1111111 12222 2233332 1345678888888765 5
Q ss_pred eeccCCCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 244 LAKPTHDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 244 ~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
+.+. ..+.+.+-+- ...++|++.++++|
T Consensus 426 i~r~-~~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 426 IGRI-EDDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred EEEE-ECCEEEEEeC-cCCHHHHHHHHHHh
Confidence 5543 3667777763 45677888877765
No 345
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.13 E-value=7.5e-09 Score=94.07 Aligned_cols=234 Identities=15% Similarity=0.106 Sum_probs=141.4
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c---cc------ccccccc
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G---LA------RSGRMLA 114 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g---~~------~~g~~~~ 114 (306)
|++.||++|++++ ++++++.++...+..|..+.+.+.+++|.++|++||+.||.|.++. | |. +.+....
T Consensus 162 D~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ 241 (460)
T PRK13237 162 DLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIK 241 (460)
T ss_pred CHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHh
Confidence 8999999998642 4555666555555554456677789999999999999999999997 3 21 1111110
Q ss_pred --cccCCCCCcEEEe--cccccCCcccceeeEe-CHHHHhhcCCCC----ccCCCCCC-HHHHHHHHHHHHHHhhccHHH
Q 021893 115 --SDWEEVRPDMVIL--GKALGGGVIPVSAVLA-DKEVMLCIQPGE----HGSTFGGN-PLASAVAIASLDVIRDEKLAE 184 (306)
Q Consensus 115 --~~~~~~~~d~~s~--sK~~~~G~~~~g~~~~-~~~~~~~~~~~~----~~~~~~~~-~~~~~aa~~al~~~~~~~~~~ 184 (306)
.....-..|.+++ .|.++.+. -|+++. +++++++++... ...+|.+- .--+.+...+++...+.++..
T Consensus 242 ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~ 319 (460)
T PRK13237 242 EIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIE 319 (460)
T ss_pred HHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHH
Confidence 0001113466644 47766221 133555 578888777542 12233321 112333333455554556777
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec----CC-ChhhHHHHHHHHHHC-Cceecc----------C
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TA-LPVSAYDICLKMKER-GILAKP----------T 248 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~----~~-~~~~~~~~~~~l~~~-Gi~~~~----------~ 248 (306)
+..+..++|.+.|++.+ .....+..|+-+.++... .+ ....+..++..|..+ ||-... .
T Consensus 320 ~ri~~~~~l~~~L~~~G-----vpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~ 394 (460)
T PRK13237 320 HRVGQVRYLGEKLLAAG-----VPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPK 394 (460)
T ss_pred HHHHHHHHHHHHHHHCC-----CceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCC
Confidence 77778888988888874 333445566666665332 11 122466787777655 554321 0
Q ss_pred -------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893 249 -------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP 287 (306)
Q Consensus 249 -------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~ 287 (306)
.-..+|+.+|- .-|.+.++...++|....+ .-..+++-
T Consensus 395 ~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~-~~~~~~g~ 440 (460)
T PRK13237 395 TGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK-HREDIRGL 440 (460)
T ss_pred CCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH-hHhhcCCe
Confidence 12679998863 4588999999999998888 55554443
No 346
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.12 E-value=9.5e-09 Score=92.82 Aligned_cols=209 Identities=21% Similarity=0.281 Sum_probs=119.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++.++++|+ +++++|++.+..+. ..+ +++|.++|+++|++||.|.+|+ |--..|.. . |-.-|+
T Consensus 102 d~~~~~~~i~---~~t~ai~~~h~~G~---~~d----~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~--~---G~~gd~ 166 (363)
T PF01041_consen 102 DPEALEKAIT---PKTKAILVVHLFGN---PAD----MDAIRAIARKHGIPLIEDAAQAFGARYKGRP--V---GSFGDI 166 (363)
T ss_dssp -HHHHHHHHH---TTEEEEEEE-GGGB----------HHHHHHHHHHTT-EEEEE-TTTTT-EETTEE--T---TSSSSE
T ss_pred CHHHHHHHhc---cCccEEEEecCCCC---ccc----HHHHHHHHHHcCCcEEEccccccCceeCCEe--c---cCCCCc
Confidence 8999999999 57899999888743 445 9999999999999999999998 22122221 2 222376
Q ss_pred EEec----ccccCCcccceeeEeC-HHHHhhcCCC---C--------------ccCCCCCCHHHHHHHHHHHHHHhhccH
Q 021893 125 VILG----KALGGGVIPVSAVLAD-KEVMLCIQPG---E--------------HGSTFGGNPLASAVAIASLDVIRDEKL 182 (306)
Q Consensus 125 ~s~s----K~~~~G~~~~g~~~~~-~~~~~~~~~~---~--------------~~~~~~~~~~~~~aa~~al~~~~~~~~ 182 (306)
.+|| |.+..|- .|+++.+ +++.+.++.. . .+..+..+.+..+.+...|+.+ ++.
T Consensus 167 ~~fSf~~~K~i~~ge--GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~ 242 (363)
T PF01041_consen 167 AIFSFHPTKIITTGE--GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL--DEI 242 (363)
T ss_dssp EEEESSTTSSS-SSS---EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH--HHH
T ss_pred eEecCCCCCCCcCCC--CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHh--hhh
Confidence 6665 8887443 3447765 5555544321 1 1122334556666666666544 334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC-CCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------
Q 021893 183 AERSAHLGEELRQHLFKIQQQF-PNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------- 249 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~-~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------- 249 (306)
.++-+++.+.+.+.|....... +..... .......+.+.+++... ....++.+.|.++||.+.+..
T Consensus 243 ~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~-~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~ 321 (363)
T PF01041_consen 243 IARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL-ADRDELVEALRARGIETRPHYPKPLHRQPVYR 321 (363)
T ss_dssp HHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC-STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGT
T ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc-chHHHHHHHHHHCCCcccccccCchhhhHHHH
Confidence 5555566666666666653110 000001 11233344555553211 357789999999999988632
Q ss_pred -----------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 250 -----------------DTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 250 -----------------~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
...|.+-.+...++++++..++.|+
T Consensus 322 ~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 322 SYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred hcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 1334444445678888988888774
No 347
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.10 E-value=9.8e-10 Score=99.30 Aligned_cols=214 Identities=16% Similarity=0.225 Sum_probs=124.8
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
.+++.++.+.++ ++ ++++++|+++.+.|+++.+++ +++|.++|++++ +++|.+++. .+.....+
T Consensus 132 ~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s------~~~~~pl~ 195 (384)
T PRK06434 132 DYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS------PYNQNPLD 195 (384)
T ss_pred EEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC------cccCCchh
Confidence 444444444443 33 247999999999999988888 999999999999 466999741 11122334
Q ss_pred CCCcEE--EecccccC-CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 120 VRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 120 ~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
...|++ |..|.++| |-.-.|.++. ++++.+.++..........+++.++.+...++.+.. ..++.+++...+.+
T Consensus 196 ~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL~~--R~~r~~~~a~~~a~ 273 (384)
T PRK06434 196 LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTLGL--RMEKHNKNGMELAR 273 (384)
T ss_pred cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcHHH--HHHHHHHHHHHHHH
Confidence 556766 44599975 3103555655 456666554322222334456655555555554432 35666677777777
Q ss_pred HHHHHHh----hCCCce---eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC----------
Q 021893 196 HLFKIQQ----QFPNYV---KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT---------- 248 (306)
Q Consensus 196 ~L~~~~~----~~~~~~---~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~---------- 248 (306)
.|+.... .+|+.. ....+.|.++.|++.. ......|.+.|.= .++-.+ |.
T Consensus 274 ~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e 350 (384)
T PRK06434 274 FLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS---MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPE 350 (384)
T ss_pred HHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC---HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHH
Confidence 7775421 111110 1123578889998863 2344455555531 121111 10
Q ss_pred -------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 -------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 -------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||+++. -||.+.+++.|+++|.
T Consensus 351 ~~~~~gi~~~liRlsvG----lEd~~dLi~dl~~Al~ 383 (384)
T PRK06434 351 ERERLGISDNLVRFSIG----IEDIDDLIKDIENALS 383 (384)
T ss_pred HHHhcCCCcCeEEEEeC----cCCHHHHHHHHHHHhc
Confidence 2578999943 3567778888877775
No 348
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.09 E-value=2.2e-08 Score=93.92 Aligned_cols=217 Identities=17% Similarity=0.127 Sum_probs=125.2
Q ss_pred CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|++.|++.|++ .+.++.+|+.....+.+|.+.| +++|.++|+++|+++++|.+|+|....-..+.....++ .
T Consensus 248 d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~ 323 (522)
T TIGR03799 248 DVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIER 323 (522)
T ss_pred CHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchh
Confidence 79999999974 2222333344455667898988 99999999999999999999986311111010112333 5
Q ss_pred CcEEEec--ccccCCcccceeeEeC-HHHHhhcCCCCc------c-----CCC--CCCHHHHHHHHHHHHHHhhcc---H
Q 021893 122 PDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEH------G-----STF--GGNPLASAVAIASLDVIRDEK---L 182 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~------~-----~~~--~~~~~~~~aa~~al~~~~~~~---~ 182 (306)
.|.++++ |.+.+.+ .+|+++.+ +...+.+..... . .++ +.+..+ .....+++.+..++ +
T Consensus 324 aDSit~d~HK~l~~P~-g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~i 401 (522)
T TIGR03799 324 ADSVTIDAHKQLYVPM-GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELL 401 (522)
T ss_pred CCEEEEChhhcCCcCc-ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHH
Confidence 7888777 9888888 88988775 555555443100 0 011 112222 34667788776644 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-------------------ChhhHHHHHHHHHHCCc
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-------------------LPVSAYDICLKMKERGI 243 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-------------------~~~~~~~~~~~l~~~Gi 243 (306)
.++..++.+++.+.|++.. +.....+..-..+.|.+.+.. .+.-...+.+.+.+.|.
T Consensus 402 i~~~~~la~~l~~~L~~~~----~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~ 477 (522)
T TIGR03799 402 IDQSIEKAKYFADLIQQQP----DFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGK 477 (522)
T ss_pred HHHHHHHHHHHHHHHhhCC----CeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence 5566666666666666542 222222222223344433211 00112356677777775
Q ss_pred eecc-C----------CCCEEEEeC-CCCCCHHHHHHHHHH
Q 021893 244 LAKP-T----------HDTIVRLTP-PLSISSNELQEGSKA 272 (306)
Q Consensus 244 ~~~~-~----------~~~~lRi~~-~~~~t~~~i~~~~~~ 272 (306)
.... . +.-.+|+++ +..++.++++.+++.
T Consensus 478 ~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 478 SFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 4332 1 124699987 455678888877653
No 349
>PRK15029 arginine decarboxylase; Provisional
Probab=99.07 E-value=1.3e-08 Score=98.20 Aligned_cols=267 Identities=14% Similarity=0.057 Sum_probs=153.0
Q ss_pred EEEEecCCCCcccchhcccCC-ccccccCCC--CCCCcccccCCCHHHHHHHHHhcCCcE--------EEEEEccccCCC
Q 021893 5 IVSCCGCFHGRTLAAISMSCD-NEAIRGFGP--LLPGHLKVDFGDITALEKIFKESGDQI--------AGFLFEPIQGEA 73 (306)
Q Consensus 5 ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~d~~~le~~i~~~~~~~--------~~v~v~~~~~~~ 73 (306)
+|.+..+-|=..+.++.+++- +.+..+... ...+.+...+-+++.++++|+++++.. ++++++|.+ .
T Consensus 247 ~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~ 324 (755)
T PRK15029 247 VVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--D 324 (755)
T ss_pred EEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--c
Confidence 445666666666666666662 222211100 001111111225899999999875433 455555543 5
Q ss_pred CcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccC-----C-CCCc-EEEec--ccccCCcccceeeEe
Q 021893 74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWE-----E-VRPD-MVILG--KALGGGVIPVSAVLA 143 (306)
Q Consensus 74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~-----~-~~~d-~~s~s--K~~~~G~~~~g~~~~ 143 (306)
|...+ +++|.++|++++++|++||+|++.......++. ... . ..+| +++-| |.+++-- ..+++..
T Consensus 325 Gv~~d----i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT-QaS~LHv 399 (755)
T PRK15029 325 GVCYN----AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS-QASYIHV 399 (755)
T ss_pred ceeeC----HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchh-hhhhhee
Confidence 77777 999999999999999999999853223333321 211 1 4577 66555 8886422 4445665
Q ss_pred CHH--HH--hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhC---CCce----
Q 021893 144 DKE--VM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF---PNYV---- 208 (306)
Q Consensus 144 ~~~--~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~---- 208 (306)
+.. .+ +++... ....+.+++.+-+++...+.+++.. +++.++..+....+|+.++++...+ ..+.
T Consensus 400 ~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~ 479 (755)
T PRK15029 400 REGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW 479 (755)
T ss_pred CCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 332 11 122221 1233444556666666677776653 2356667777777888887654210 0000
Q ss_pred -----------------------------eeEEEe-----e-------------eEEEEEEecCC-------ChhhHHHH
Q 021893 209 -----------------------------KEVRGR-----G-------------LFNAVEFDKTA-------LPVSAYDI 234 (306)
Q Consensus 209 -----------------------------~~~~~~-----g-------------~~~~i~~~~~~-------~~~~~~~~ 234 (306)
..+... | .=+.+..+..+ .+..+..+
T Consensus 480 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l 559 (755)
T PRK15029 480 NKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALV 559 (755)
T ss_pred CccccccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHH
Confidence 010000 0 00122221110 11123378
Q ss_pred HHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 235 CLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 235 ~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+.|.++||.+.-.+...+-+.++...+++++++++++|.++-+
T Consensus 560 ~~~L~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 560 TAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred HHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 99998889999988888888888899999999999999987755
No 350
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.06 E-value=1.1e-08 Score=92.66 Aligned_cols=233 Identities=15% Similarity=0.109 Sum_probs=141.3
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccccc-----cccccccc-
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARS-----GRMLASDW- 117 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~-----g~~~~~~~- 117 (306)
|++.||++|+.+. ++++++.++..+|..|..+.+.+.++++.++|++||+.||.|.++. |.... +.....+.
T Consensus 155 D~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ 234 (450)
T TIGR02618 155 DLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIA 234 (450)
T ss_pred CHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHH
Confidence 8999999998632 3566677666666654466778889999999999999999999997 21110 00000011
Q ss_pred -----CCCCCcEEEec--ccccCCcccce-eeE-eCHHHHhhcCCCCcc-CC---CCC-CHHHHHHHHHHHHHHhhccHH
Q 021893 118 -----EEVRPDMVILG--KALGGGVIPVS-AVL-ADKEVMLCIQPGEHG-ST---FGG-NPLASAVAIASLDVIRDEKLA 183 (306)
Q Consensus 118 -----~~~~~d~~s~s--K~~~~G~~~~g-~~~-~~~~~~~~~~~~~~~-~~---~~~-~~~~~~aa~~al~~~~~~~~~ 183 (306)
.--..|.+++| |..+ . ++| +++ .+++++++++..... .. +.+ ..-.+.+...+++...+..+.
T Consensus 235 ei~~e~~~~aD~~~~S~~Kd~~--~-~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~ 311 (450)
T TIGR02618 235 EILKEMMSYADGCTMSGKKDCL--V-NIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYI 311 (450)
T ss_pred HHHHHHhccCcEEEEeeccCCC--C-CCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHH
Confidence 01123554443 3333 2 433 355 478888887654111 22 221 112333444456655555567
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec----CC-ChhhHHHHHHHHHHC-Cceecc----------
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TA-LPVSAYDICLKMKER-GILAKP---------- 247 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~----~~-~~~~~~~~~~~l~~~-Gi~~~~---------- 247 (306)
++.....++|.+.|++.+ .....+..|+.+.++... .+ ....+..++..|..+ ||-...
T Consensus 312 ~~r~~~a~~La~~L~~~G-----vpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~ 386 (450)
T TIGR02618 312 EHRVKQVRYLGDKLKAAG-----VPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNN 386 (450)
T ss_pred HHHHHHHHHHHHHHHHCC-----CcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCC
Confidence 777778899999999883 222335666777776432 11 122466777777655 544321
Q ss_pred C-------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893 248 T-------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP 287 (306)
Q Consensus 248 ~-------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~ 287 (306)
. .-..+|+.+|- .-|.+.++...+++....+ .-..+++-
T Consensus 387 ~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~-~~~~~~g~ 433 (450)
T TIGR02618 387 VTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK-HRDDIRGL 433 (450)
T ss_pred CCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHh-hHhhcCce
Confidence 0 12679998863 4588999999999998888 55554443
No 351
>PLN02452 phosphoserine transaminase
Probab=99.05 E-value=8.7e-09 Score=92.56 Aligned_cols=199 Identities=11% Similarity=0.014 Sum_probs=139.1
Q ss_pred CcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccc
Q 021893 59 DQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIP 137 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~ 137 (306)
++...+.+.++...+|.. .+ ++++. ++++|+|.+++ + .+..+..+.++ .++.+..|.+| .. +
T Consensus 144 ~~~~~v~~~hnETstGv~~~~----~~~i~------~~~lvVDa~Ss-~--g~~pidv~~~~--v~~~saqK~lG-P~-G 206 (365)
T PLN02452 144 PDAKFVHICANETIHGVEFKD----YPDVG------NVPLVADMSSN-F--LSKPVDVSKYG--VIYAGAQKNVG-PS-G 206 (365)
T ss_pred CCCcEEEECCCCCCCcEecCc----ccccC------CCeEEEECCcc-c--cCcccCHHHcC--EEEEecccccC-CC-C
Confidence 468899999999999974 44 55543 38999999997 2 23344445554 47778889996 33 6
Q ss_pred ceeeEeCHHHHhhcCCC-----------CccCC-CCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHHHHHH
Q 021893 138 VSAVLADKEVMLCIQPG-----------EHGST-FGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+|++++++++++++.+. ..... ++++..++.+..++++++.++ .+.++.+++.+++++.|++..
T Consensus 207 l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~ 286 (365)
T PLN02452 207 VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESN 286 (365)
T ss_pred eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 78899999998776532 11122 255666777888999998764 367788888888888888742
Q ss_pred hhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 202 QQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 202 ~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.-+. ...... .+...+.+.++. .....+|.+.+.++|+...++. -+.+|++.-...+.++++.+++.+++.-+
T Consensus 287 G~y~-~~~~~~~rs~~~vsF~~~~---~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 287 GFYV-CPVEKSVRSLMNVPFTLGG---SELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred Cccc-CCCChHHhCCeEEEEEcCC---chhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 1111 111111 234456666654 2367789999999999998863 23499998888999999999999988765
No 352
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.04 E-value=8.2e-09 Score=92.82 Aligned_cols=199 Identities=14% Similarity=0.073 Sum_probs=130.3
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccceee
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAV 141 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~ 141 (306)
|++.++..++|...+ ++++...+ +++++|+|.+-+ + .+..+..+ + .|++ +..|++++.. +++++
T Consensus 131 v~~vhnETSTGv~np----v~~i~~~~--~~~lliVDavSs-~--g~~~l~~d--~--iDv~~tgsQK~L~~pp-Gls~v 196 (374)
T TIGR01365 131 VVFTWNGTTSGVRVP----NGDFIPAD--REGLTICDATSA-A--FAQDLDYH--K--LDVVTFSWQKVLGGEG-AHGML 196 (374)
T ss_pred EEEecCCCchheecc----cccccccc--CCCcEEEEccch-h--cCCCCChh--H--CcEEEEechhccCCCC-ceEEE
Confidence 568888888998887 65554322 589999999887 2 23334333 3 4554 5669999655 77889
Q ss_pred EeCHHHHhhcCCC-------C----------------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Q 021893 142 LADKEVMLCIQPG-------E----------------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELR 194 (306)
Q Consensus 142 ~~~~~~~~~~~~~-------~----------------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~ 194 (306)
+.+++.+++.... . ....++++...+.++..+++++.++ +..++.+++.+.++
T Consensus 197 ~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~ 276 (374)
T TIGR01365 197 ILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLE 276 (374)
T ss_pred EECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 9999888664421 0 1112233444666666777766553 35778888888888
Q ss_pred HHHHHHH-hhCCCceeeE-EEeeeEEEEEEecCC-------Chhh-HHHHHHHHHHCCceeccCC----CCEEEEeCCCC
Q 021893 195 QHLFKIQ-QQFPNYVKEV-RGRGLFNAVEFDKTA-------LPVS-AYDICLKMKERGILAKPTH----DTIVRLTPPLS 260 (306)
Q Consensus 195 ~~L~~~~-~~~~~~~~~~-~~~g~~~~i~~~~~~-------~~~~-~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~ 260 (306)
+.+++++ ..+ ..... ..+..+..+.+++.. ...+ ..++.+.|.++|+.+.++. +..+||.....
T Consensus 277 ~~l~~lg~l~~--~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~ 354 (374)
T TIGR01365 277 AFVAKNNWIHF--LAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGAT 354 (374)
T ss_pred HHHHHCCCccc--CCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCc
Confidence 8888875 221 11101 123333445553311 0111 5789999999999888652 47899999999
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 021893 261 ISSNELQEGSKALHDVLE 278 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~ 278 (306)
.+.+|++.+++.|+=+.+
T Consensus 355 i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 355 VEKSDLECLCPWLDWAFA 372 (374)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999975554
No 353
>PLN02263 serine decarboxylase
Probab=99.04 E-value=1.3e-07 Score=86.80 Aligned_cols=208 Identities=14% Similarity=0.036 Sum_probs=132.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCC-----EEEEehhhhccccc----ccccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-----LMIADEIQSGLARS----GRMLASD 116 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi-----~li~De~~~g~~~~----g~~~~~~ 116 (306)
|+++|+++|.++..++.+|+.+....++|.+=+ +++|.++|+++|+ +|.+|.+++|+... ...+.+
T Consensus 214 D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df- 288 (470)
T PLN02263 214 DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF- 288 (470)
T ss_pred cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC-
Confidence 799999999876445677777878888898877 9999999999997 99999999985221 111111
Q ss_pred cCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCC-----ccCCCCC--CHHHHHHHHHHHHHHhhccHHHHH-
Q 021893 117 WEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGG--NPLASAVAIASLDVIRDEKLAERS- 186 (306)
Q Consensus 117 ~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~aa~~al~~~~~~~~~~~~- 186 (306)
....|-++++ |.++..+ ++|.++.+++.++.+.... ...+..+ +......++.+++.+..+++.+.+
T Consensus 289 --~~~vDSIsvD~HK~l~~P~-~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~ 365 (470)
T PLN02263 289 --KKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQ 365 (470)
T ss_pred --CcCccEEEECCccccCCCc-CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHH
Confidence 1124555554 9998888 9998988876554443210 0012222 223455666777777665554444
Q ss_pred --HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHH
Q 021893 187 --AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN 264 (306)
Q Consensus 187 --~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~ 264 (306)
.++.+++.++|++.. .........+.+.+..+. .. ...+|-.+... ++.+++..+...+++
T Consensus 366 ~~~~~A~~l~~~l~~~g-----~~~~~~p~s~~V~f~~p~------~~-----~~~~gW~L~~~-~~~~Hivvmphv~~~ 428 (470)
T PLN02263 366 KCLRNAHYLKDRLREAG-----ISAMLNELSSTVVFERPK------DE-----EFVRRWQLACQ-GNIAHVVVMPSVTIE 428 (470)
T ss_pred HHHHHHHHHHHHHHhCC-----CeEEeCCCceEEEEecCc------hH-----HhhcceEEccC-CCcEEEEEcCCCCHH
Confidence 455666666666652 222233334444443221 11 12456665554 356888887777899
Q ss_pred HHHHHHHHHHHHHh
Q 021893 265 ELQEGSKALHDVLE 278 (306)
Q Consensus 265 ~i~~~~~~l~~~l~ 278 (306)
.++++++.|++..+
T Consensus 429 ~id~fi~DL~~~~~ 442 (470)
T PLN02263 429 KLDYFLKELVEKRS 442 (470)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988776
No 354
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.02 E-value=4.4e-09 Score=94.85 Aligned_cols=252 Identities=19% Similarity=0.156 Sum_probs=138.2
Q ss_pred eEEEEecCCCCcccchhcccCC-ccccccCCCCCCCc---ccccCCCHHHHHHHHHhcCCcEE---EEEEccccCCCCcc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGH---LKVDFGDITALEKIFKESGDQIA---GFLFEPIQGEAGVI 76 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~d~~~le~~i~~~~~~~~---~v~v~~~~~~~G~~ 76 (306)
+.|.+..+-|=..+.++.+++- +.+..+... ..+. +....-+.+.++++|+++++..+ +++++|.+ .|..
T Consensus 107 d~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~-~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~ 183 (417)
T PF01276_consen 107 DKVLVDRNCHKSVYNALILSGAIPVYIPPEDN-EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVC 183 (417)
T ss_dssp CEEEEETT--HHHHHHHHHHTEEEEEEEEEE--TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEE
T ss_pred CEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc-ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEE
Confidence 3455666666666667766662 222221100 0111 11111235999999999875544 56665544 5788
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc-------EEEec--ccccCCcccceeeEeCHHH
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD-------MVILG--KALGGGVIPVSAVLADKEV 147 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d-------~~s~s--K~~~~G~~~~g~~~~~~~~ 147 (306)
.+ +++|.++|++++++|++||+|++..... .+..+...+..| +++-| |.+++-- ..+++..+.+.
T Consensus 184 ~d----i~~I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~alt-Qts~lh~~~~~ 257 (417)
T PF01276_consen 184 YD----IKEIAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALT-QTSMLHVKGDR 257 (417)
T ss_dssp E-----HHHHHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-T-T-EEEEEETCC
T ss_pred EC----HHHHHHHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhcccccc-cceEEEecCCC
Confidence 88 9999999999999999999998532222 333455566777 77666 8886443 66667765442
Q ss_pred -H--hhcCCC-CccCCCCCCHHHHHHHHHHHHHH-hh--ccHHHHHHHHHHHHHHHHHHHHhh--CC-CceeeEEEee--
Q 021893 148 -M--LCIQPG-EHGSTFGGNPLASAVAIASLDVI-RD--EKLAERSAHLGEELRQHLFKIQQQ--FP-NYVKEVRGRG-- 215 (306)
Q Consensus 148 -~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~-~~--~~~~~~~~~~~~~l~~~L~~~~~~--~~-~~~~~~~~~g-- 215 (306)
+ +++... ....+.+++.+.+++...+.+++ .. .++.++..++.+.+|+.+++.... +. .....+...+
T Consensus 258 ~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~ 337 (417)
T PF01276_consen 258 IVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCW 337 (417)
T ss_dssp CTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGC
T ss_pred cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCcccc
Confidence 2 233221 23345556777777777888887 33 346778888888899988663211 00 0000111111
Q ss_pred -----------------------eEEEEEEec-------CCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHH
Q 021893 216 -----------------------LFNAVEFDK-------TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN 264 (306)
Q Consensus 216 -----------------------~~~~i~~~~-------~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~ 264 (306)
.=+.+..+. ...+..+..+.+.|.++||.+.-.+...+-+-.+...|++
T Consensus 338 ~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 338 DLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp B--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred ccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 112333311 1134567788999999999998877777777766666654
No 355
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=98.99 E-value=3.4e-09 Score=84.50 Aligned_cols=78 Identities=28% Similarity=0.451 Sum_probs=60.4
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCcc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVI 136 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~ 136 (306)
+++++++++++++++|...+ +++|.++|+++|+++|+|++|.++...... .......+|+++.| |.+++ .
T Consensus 91 ~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~-~- 162 (170)
T cd01494 91 PNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG-E- 162 (170)
T ss_pred CceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc--cccccccCCEEEEEcccccCC-C-
Confidence 67999999999999998887 799999999999999999999865333221 12223456777555 99987 6
Q ss_pred cceeeEeC
Q 021893 137 PVSAVLAD 144 (306)
Q Consensus 137 ~~g~~~~~ 144 (306)
++|+++++
T Consensus 163 ~~G~l~~~ 170 (170)
T cd01494 163 GGGVVIVK 170 (170)
T ss_pred ceEEEEeC
Confidence 88988764
No 356
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.95 E-value=1.4e-08 Score=91.34 Aligned_cols=207 Identities=18% Similarity=0.195 Sum_probs=120.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|.+.++++++++ ++++|++-....+ ...+ +++++++|++.|.+|++|-+|. |+...|. ++ +.+.. .|+
T Consensus 157 D~d~l~~~a~~~--kPklIi~G~S~y~--~~~d----~~~~reIad~vga~l~~D~sH~~GLIa~g~-~~-~P~~~-ADv 225 (399)
T PF00464_consen 157 DYDELEKLAKEH--KPKLIICGASSYP--RPID----FKRFREIADEVGAYLMADISHIAGLIAGGL-FP-NPFPY-ADV 225 (399)
T ss_dssp -HHHHHHHHHHH----SEEEEE-SSTS--S-------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS-S---GCCT-SSE
T ss_pred CHHHHHHHHhhc--CCCEEEECchhcc--CccC----HHHHHHHHHhcCcEEEecccccccceehhe-ec-Ccccc-ceE
Confidence 799999999986 6788888665432 2344 8999999999999999999997 6643333 32 33333 688
Q ss_pred EEec--ccccCCcccceeeEeC--------------HHHHhhcCCCCccCCCCCCHH-HHHHHHHHHHHHhh---ccHHH
Q 021893 125 VILG--KALGGGVIPVSAVLAD--------------KEVMLCIQPGEHGSTFGGNPL-ASAVAIASLDVIRD---EKLAE 184 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~aa~~al~~~~~---~~~~~ 184 (306)
++.| |.|.|. +-|.+..+ +++.+++......+...++-. .+++...++..+.+ .++.+
T Consensus 226 vt~sThKtl~GP--rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~ 303 (399)
T PF00464_consen 226 VTGSTHKTLRGP--RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAK 303 (399)
T ss_dssp EEEESSGGG-SS--S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred EEeecccccccc--CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence 8665 999744 56668888 677776664322222222222 33333345555433 35778
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----CCCEEEE
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----HDTIVRL 255 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lRi 255 (306)
++.++.+.|.+.|++.+... + .-.-...++++++... +.+..+..+.|.+.||.+-. . .+..||+
T Consensus 304 qVv~NAk~La~~L~~~G~~v---~-~ggTd~H~vlvd~~~~--~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRl 377 (399)
T PF00464_consen 304 QVVKNAKALAEALQERGFKV---V-TGGTDNHQVLVDLRSF--GIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRL 377 (399)
T ss_dssp HHHHHHHHHHHHHHHTT-EE---G-GGS-SSSEEEEEGGGG--TS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEE
T ss_pred HHHHHHHHHHHHHhhCCcEE---E-ECCCCCCeEEEEeccc--ccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEE
Confidence 88899999999998875331 1 1123455667777542 34566777888888998852 2 2457999
Q ss_pred eCCC----CCCHHHHHHHHH
Q 021893 256 TPPL----SISSNELQEGSK 271 (306)
Q Consensus 256 ~~~~----~~t~~~i~~~~~ 271 (306)
..+. ...++|++++.+
T Consensus 378 GT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 378 GTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp ESHHHHHTT--HHHHHHHHH
T ss_pred CCHHHHhCCCCHHHHHHHHh
Confidence 8542 345556655444
No 357
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.95 E-value=3.4e-07 Score=80.28 Aligned_cols=213 Identities=17% Similarity=0.203 Sum_probs=136.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|.|++++...++ ++++|++= .+......+ +++++++|++.|.+|++|-+|- |+...|. ++ +.... .|+
T Consensus 154 DyD~~~k~a~e~--kPK~ii~G--~SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~-~p-~P~~~-Adv 222 (413)
T COG0112 154 DYDEVEKLAKEV--KPKLIIAG--GSAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGV-HP-NPLPH-ADV 222 (413)
T ss_pred CHHHHHHHHHHh--CCCEEEEC--ccccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhccc-CC-CCCCc-cce
Confidence 789999999986 56666663 333334566 9999999999999999999996 6644443 22 22222 577
Q ss_pred EEec--ccccCCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHH-HHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893 125 VILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASA-VAIASLDVIRD---EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-aa~~al~~~~~---~~~~~~~~~~~~~l~~~L 197 (306)
++.+ |+|.|. |-|.++.+ +++.+++...-..+...++-+-.. +-..++....+ .++.+++.++.+.|.+.|
T Consensus 223 VTtTTHKTlrGP--rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l 300 (413)
T COG0112 223 VTTTTHKTLRGP--RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEAL 300 (413)
T ss_pred EeCCcccCCCCC--CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 7544 999743 55668887 588888876444333333333333 32344444443 346778888888888888
Q ss_pred HHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C------CCCEEEEeCCC----CCC
Q 021893 198 FKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T------HDTIVRLTPPL----SIS 262 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------~~~~lRi~~~~----~~t 262 (306)
.+.+.. ....+ ...++.+++.+. +.........|-+-||.+-. + .+..||+..+. ...
T Consensus 301 ~~~G~~-----vvsGgTdnHl~lVDl~~~--~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~ 373 (413)
T COG0112 301 KERGFK-----VVSGGTDNHLVLVDLRSK--GLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFG 373 (413)
T ss_pred HHcCCe-----EecCCccceEEEEEcccC--CCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCC
Confidence 886422 22233 445556666631 34555666666666887652 2 24568998653 345
Q ss_pred HHHHHHHHHHHHHHHh
Q 021893 263 SNELQEGSKALHDVLE 278 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~ 278 (306)
++|+++..+.|.+++.
T Consensus 374 e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 374 EAEMEEIADLIADVLD 389 (413)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6788888888888877
No 358
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.92 E-value=1.6e-07 Score=84.65 Aligned_cols=232 Identities=19% Similarity=0.156 Sum_probs=139.9
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----c------cccccccc
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----L------ARSGRMLA 114 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~------~~~g~~~~ 114 (306)
|++.|+++|++++ +++..+.+.-.+|..|..+.+.+.++++.++|++||+.++.|.+.-. | +..+....
T Consensus 168 dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~ 247 (467)
T TIGR02617 168 DLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIE 247 (467)
T ss_pred CHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHH
Confidence 8999999999754 34555555555666677788999999999999999999999987641 1 11222110
Q ss_pred --cccCCCCCcE--EEecccccCCcccce-eeEeC-H---HHHhhcCCC----CccCCCCC-CHHHHHHHHHHHHHHhhc
Q 021893 115 --SDWEEVRPDM--VILGKALGGGVIPVS-AVLAD-K---EVMLCIQPG----EHGSTFGG-NPLASAVAIASLDVIRDE 180 (306)
Q Consensus 115 --~~~~~~~~d~--~s~sK~~~~G~~~~g-~~~~~-~---~~~~~~~~~----~~~~~~~~-~~~~~~aa~~al~~~~~~ 180 (306)
....--..|. +|+||+++ +++| +++++ + ++.++++.. -...+|.+ +.--+-+....|+..-++
T Consensus 248 eI~rE~~~~aDsvt~slsKglg---ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~ 324 (467)
T TIGR02617 248 QITRETYKYADMLAMSAKKDAM---VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL 324 (467)
T ss_pred HHHHHhhccCCEEEEEcCCCCC---CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccH
Confidence 0000112354 47889887 2433 36665 4 455555432 12234432 222333333455555555
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE----ecCC-ChhhHHHHHHHHHHC-Cceecc-------
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----DKTA-LPVSAYDICLKMKER-GILAKP------- 247 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~----~~~~-~~~~~~~~~~~l~~~-Gi~~~~------- 247 (306)
++..+-....++|.++|.+.+ +.... ..|.-+.++. +..+ ....+..++-.|..+ ||-...
T Consensus 325 ~yl~~ri~qv~yl~~~L~~~G-----vpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~ 398 (467)
T TIGR02617 325 DWLAYRINQVQYLVNGLEEIG-----VVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-----CcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecc
Confidence 667777777888888888874 32333 4455444542 2221 123466787777655 554221
Q ss_pred ---C-------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893 248 ---T-------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP 287 (306)
Q Consensus 248 ---~-------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~ 287 (306)
. .-..+|++++- .-|.+.++...+++....+ .-..+++-
T Consensus 399 rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~-~~~~i~g~ 448 (467)
T TIGR02617 399 RDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE-NAPNIKGL 448 (467)
T ss_pred cCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHh-hhhhcCCe
Confidence 0 12679998863 4588999999999998888 55444443
No 359
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=2.4e-08 Score=87.06 Aligned_cols=216 Identities=19% Similarity=0.229 Sum_probs=128.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--ccccccC-CCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLASDWE-EVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~~~~-~~~~ 122 (306)
|++.+-+.|++.++...+++-.+-||||| +-++.+.|++|.++.++.+++-++|=+|-||+.... ......+ ...+
T Consensus 158 df~~mla~L~~a~~~~vvLLH~CcHNPTG-~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~ 236 (396)
T COG1448 158 DFDGMLADLKTAPEGSVVLLHGCCHNPTG-IDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGP 236 (396)
T ss_pred cHHHHHHHHHhCCCCCEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence 67888888887766666777777889998 457999999999999999999999999998842211 0111110 1122
Q ss_pred c---EEEeccccc-CCcccceeeEe---CHHHHhhcCCC---CccCCCCCCH-HHHHHHHH-----HHHHHhh---ccHH
Q 021893 123 D---MVILGKALG-GGVIPVSAVLA---DKEVMLCIQPG---EHGSTFGGNP-LASAVAIA-----SLDVIRD---EKLA 183 (306)
Q Consensus 123 d---~~s~sK~~~-~G~~~~g~~~~---~~~~~~~~~~~---~~~~~~~~~~-~~~~aa~~-----al~~~~~---~~~~ 183 (306)
. ..|+||.|+ =|- |+|.+.. +++..+.+... ..-..|+.++ -++..... .|+..-. ++.+
T Consensus 237 ~~lva~S~SKnfgLYgE-RVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr 315 (396)
T COG1448 237 ELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMR 315 (396)
T ss_pred cEEEEehhhhhhhhhhh-ccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 2 238899999 465 7875432 34433333211 1112333222 12222221 1221111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCH
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISS 263 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~ 263 (306)
.++.+.+..+.+.|.+....- .+.......|++... +...+++.+..-+.||++...+ |+++. ..++
T Consensus 316 ~Ri~~mR~~lv~~L~~~~~~~-~f~~i~~Q~GMFsy~-------Gls~~QV~rLree~~IY~v~sG----Ri~va-Gl~~ 382 (396)
T COG1448 316 QRILEMRQALVDALKALGAPR-NFDFIISQRGMFSYT-------GLSPEQVDRLREEFGIYLVASG----RINVA-GLNT 382 (396)
T ss_pred HHHHHHHHHHHHHHHhhCCCc-ccchHhhcCceeecC-------CCCHHHHHHHHHhccEEEecCC----eeeec-cCCh
Confidence 677777777777777744321 233444556655432 2334444444456699987754 77763 5678
Q ss_pred HHHHHHHHHHHHH
Q 021893 264 NELQEGSKALHDV 276 (306)
Q Consensus 264 ~~i~~~~~~l~~~ 276 (306)
..++.+++.|.++
T Consensus 383 ~ni~~va~ai~~v 395 (396)
T COG1448 383 SNIDYVAKAIAAV 395 (396)
T ss_pred hhHHHHHHHHHhh
Confidence 8999999988765
No 360
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.90 E-value=1.5e-07 Score=93.58 Aligned_cols=193 Identities=14% Similarity=0.085 Sum_probs=119.3
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccc---c-C
Q 021893 60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KAL---G-G 133 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~---~-~ 133 (306)
.+..++ ....+.+|.+.+ +++|.++||++|+++++ .++. .+.....+.-++..|+++.+ |.. | |
T Consensus 234 ~v~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~----lal~~l~~pge~GADi~vgsgqKwg~P~G~G 303 (993)
T PLN02414 234 DVCGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDL----LALTMLKPPGEWGADIVVGSAQRFGVPMGYG 303 (993)
T ss_pred ceEEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECH----HHhcCCCCHhhccCcEEEECCCccccCCCCC
Confidence 455554 445556788888 99999999999999999 4443 11111011223456766443 543 2 6
Q ss_pred CcccceeeEeCHHHHhhcCCC-------Ccc-C----------------CCCCCHH---HHHHHHHHHH--HHhh---cc
Q 021893 134 GVIPVSAVLADKEVMLCIQPG-------EHG-S----------------TFGGNPL---ASAVAIASLD--VIRD---EK 181 (306)
Q Consensus 134 G~~~~g~~~~~~~~~~~~~~~-------~~~-~----------------~~~~~~~---~~~aa~~al~--~~~~---~~ 181 (306)
|. ..|++++++++...+-+. ... . ..+.|.- ++.++.+++. .+.. ++
T Consensus 304 GP-~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~ 382 (993)
T PLN02414 304 GP-HAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 382 (993)
T ss_pred CC-CeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHH
Confidence 77 799999999876644321 000 0 0022332 3333333221 1112 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCC
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSI 261 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~ 261 (306)
+.+++.++..+++++|++.+.. .... +..+ .+.+.++ ...++.+.|.++||.++....+.+|+|++..+
T Consensus 383 Ia~ri~~la~~l~~~L~~~G~~---~~~~-~~f~-~vt~~~~------~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~ 451 (993)
T PLN02414 383 IAQRVHGLAGVFAAGLKKLGFQ---VQSL-PFFD-TVKVKCS------DADAIADAAAKVGINLRVVDANTVTVSFDETT 451 (993)
T ss_pred HHHHHHHHHHHHHHHHhhcCCc---cCCC-CCcC-eEEEecC------CHHHHHHHHHHCCCeeEEecCCeEEEEeeccC
Confidence 5678888888999988775322 1111 1111 2233332 34789999999999988766778999999999
Q ss_pred CHHHHHHHHHHHH
Q 021893 262 SSNELQEGSKALH 274 (306)
Q Consensus 262 t~~~i~~~~~~l~ 274 (306)
|++||+.+++.|.
T Consensus 452 T~edId~L~~~l~ 464 (993)
T PLN02414 452 TLEDVDKLFKVFA 464 (993)
T ss_pred CHHHHHHHHHHHc
Confidence 9999999999986
No 361
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=6.8e-07 Score=79.17 Aligned_cols=251 Identities=17% Similarity=0.145 Sum_probs=160.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVI 76 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~ 76 (306)
+++|+..-.|=||..-++.+..+ ..|+.++.+ |+++|++++. ++++++.+..++..+ +
T Consensus 156 ~R~~~LIP~SAHGTNPASAam~G------------~~VV~V~~~~~G~VDlddLk~k~~---~~~AalMiTnPsT~G--v 218 (496)
T COG1003 156 HRNICLIPDSAHGTNPASAAMAG------------FKVVVVKCDENGNVDLDDLRAKAE---DNLAALMITNPSTLG--V 218 (496)
T ss_pred cCcEEEeeccccCCChhhHhhcC------------ceEEEEecCCCCCccHHHHHHHhc---cceeEEEeccCcccc--c
Confidence 35666777777887655444444 134455543 8999999998 579888887776543 3
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhh----cccccccccccccCCCCCcEE--Eeccccc-----CCcccceeeEeCH
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQS----GLARSGRMLASDWEEVRPDMV--ILGKALG-----GGVIPVSAVLADK 145 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~----g~~~~g~~~~~~~~~~~~d~~--s~sK~~~-----~G~~~~g~~~~~~ 145 (306)
-++-+.+|+++.+++|-.|..|.+-- |..+.|. +..|++ -+-|.|+ ||. ++|=+.+++
T Consensus 219 --FE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd--------~G~DV~HlNLHKTF~iPHGGGGP-G~GPvgVk~ 287 (496)
T COG1003 219 --FEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGD--------MGFDVVHLNLHKTFCIPHGGGGP-GAGPVGVKA 287 (496)
T ss_pred --chhhHHHHHHHHHHcCCEEEecCcchhhhhccccccc--------cccceEEeecccccccCCCCCCC-CCCceehHh
Confidence 36669999999999999999998764 3323332 334544 3446664 566 667676666
Q ss_pred HHHhhcCC----C---------------CccCCCCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhh
Q 021893 146 EVMLCIQP----G---------------EHGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQ 203 (306)
Q Consensus 146 ~~~~~~~~----~---------------~~~~~~~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~ 203 (306)
.+...+-. . .....+.+|...+..++..+..+..+++ .+...-+..++..+|+....
T Consensus 288 ~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~- 366 (496)
T COG1003 288 HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYP- 366 (496)
T ss_pred hccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCc-
Confidence 65433321 0 0122234566677777777887776554 33444567777777776321
Q ss_pred CCCceeeEEE-eeeEEEEEEecC--CChhhHHHHHHHHHHCCceec----c-CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 204 FPNYVKEVRG-RGLFNAVEFDKT--ALPVSAYDICLKMKERGILAK----P-THDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 204 ~~~~~~~~~~-~g~~~~i~~~~~--~~~~~~~~~~~~l~~~Gi~~~----~-~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
..+.... ...=+.++..+. ..+....+++++|++.|+..- | .-.+.+.+=|.=.-+++++|++++++.+
T Consensus 367 ---~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~ 443 (496)
T COG1003 367 ---VPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA 443 (496)
T ss_pred ---cccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence 1111111 111122222211 135678899999999998743 2 1367888888878899999999999999
Q ss_pred HHhhhcCCCC
Q 021893 276 VLELDLPKMR 285 (306)
Q Consensus 276 ~l~~~~~~~~ 285 (306)
+.+ +..+.+
T Consensus 444 I~~-Ea~~~~ 452 (496)
T COG1003 444 IRE-EADAVP 452 (496)
T ss_pred HHH-HHHhcc
Confidence 998 887765
No 362
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.86 E-value=1.8e-07 Score=93.15 Aligned_cols=195 Identities=16% Similarity=0.109 Sum_probs=122.6
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEE--ecccc---c-
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI--LGKAL---G- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s--~sK~~---~- 132 (306)
+++.++++ .+.+.+|.+.+ +++|.++||++|+++++|..+... +... +.-++..|++. ..|.. +
T Consensus 205 ~~~~~vlv-q~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al---~~l~--~pge~GaDi~vgs~qkfg~P~g~ 274 (954)
T PRK05367 205 DDVFGVLL-QYPGTSGEVRD----YTALIAAAHARGALVAVAADLLAL---TLLT--PPGEMGADIAVGSAQRFGVPMGF 274 (954)
T ss_pred ccEEEEEE-ecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhc---cCCC--ChhhcCCCEEEeeCcccCCCCCC
Confidence 35666544 44567788888 999999999999999999866311 1111 12234567653 34542 2
Q ss_pred CCcccceeeEeCHHHHhhcCCCCc-------cC--------------CC---CCC---HHHHHHHHHH--HHHHhh---c
Q 021893 133 GGVIPVSAVLADKEVMLCIQPGEH-------GS--------------TF---GGN---PLASAVAIAS--LDVIRD---E 180 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~~~~~~~~~~-------~~--------------~~---~~~---~~~~~aa~~a--l~~~~~---~ 180 (306)
||. ..|++++++++...+.+... .. .+ +.| ..++.++.++ +..+.. +
T Consensus 275 GGP-~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~ 353 (954)
T PRK05367 275 GGP-HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLK 353 (954)
T ss_pred CCC-CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 677 78999999988777653210 00 00 111 1122222222 233333 3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCC
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLS 260 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~ 260 (306)
++.+++..+..+++++|+..+... ... .....+.+.++ .+..++.+.|.++||.++....+.+|++++..
T Consensus 354 ~Ia~~~~~la~~l~~~L~~~G~~~---~~~--~~f~~~~~~~~-----~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~ 423 (954)
T PRK05367 354 AIARRVHRLAAILAAGLRALGLEV---VHD--SFFDTLTVEVG-----GDAAAVLARALAAGINLRRVDDDHVGISLDET 423 (954)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccc---CCC--CCCCeEEEeCC-----CCHHHHHHHHHHCCceeccccCCEEEEEeccc
Confidence 456778888888888887643221 111 11111222222 35778999999999999776677899999999
Q ss_pred CCHHHHHHHHHHHH
Q 021893 261 ISSNELQEGSKALH 274 (306)
Q Consensus 261 ~t~~~i~~~~~~l~ 274 (306)
+|++||+.+++.|.
T Consensus 424 ~t~~did~l~~~l~ 437 (954)
T PRK05367 424 TTREDLAALLAVFG 437 (954)
T ss_pred CCHHHHHHHHHHHc
Confidence 99999999999996
No 363
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.81 E-value=8.5e-07 Score=85.13 Aligned_cols=223 Identities=11% Similarity=0.068 Sum_probs=133.4
Q ss_pred CHHHHHHHHHhcCCc---EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEE-EEehhhhcccccccccc-cccC--
Q 021893 46 DITALEKIFKESGDQ---IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM-IADEIQSGLARSGRMLA-SDWE-- 118 (306)
Q Consensus 46 d~~~le~~i~~~~~~---~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~l-i~De~~~g~~~~g~~~~-~~~~-- 118 (306)
+.+.++++|+++++. .++|+.+| +..|...+ +++|.++| |+.+ ++||+|.++......+. ....
T Consensus 281 ~~e~I~~~i~~~p~~~~p~~vvit~p--TYdGi~yd----~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~ 351 (713)
T PRK15399 281 TRDSIEEKVAATTQAQWPVHAVITNS--TYDGLLYN----TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSG 351 (713)
T ss_pred cHHHHHHHHHhCCCcCCceEEEEECC--CCCceeeC----HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhC
Confidence 459999999988643 35555555 34677777 89999988 6777 59999986422222121 1111
Q ss_pred CCCCcEE---E--ecccccCCcccceeeEeCHHHH-hhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHH
Q 021893 119 EVRPDMV---I--LGKALGGGVIPVSAVLADKEVM-LCIQPGE-HGSTFGGNPLASAVAIASLDVIRD---EKLAERSAH 188 (306)
Q Consensus 119 ~~~~d~~---s--~sK~~~~G~~~~g~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~ 188 (306)
+-.+|.+ + .-|.+++-- ..+++..+..+- +++.... ...+.+++.+-+++...+.+++.. ..+.+...+
T Consensus 352 ~~~aD~~i~~tQStHKtL~alT-QaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~ 430 (713)
T PRK15399 352 ERVPGKVIFETQSTHKMLAAFS-QASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVE 430 (713)
T ss_pred CCCCCeeeeeeeehhccccccc-hheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 1135655 3 348886432 555676644321 1222211 222334455556666666666653 346677777
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEe-------------------------------eeEEEEEEecC-------CChhh
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGR-------------------------------GLFNAVEFDKT-------ALPVS 230 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~-------------------------------g~~~~i~~~~~-------~~~~~ 230 (306)
....+|+.+.++.....+|.+.+... -.=+.+..+.. ..+..
T Consensus 431 ~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~ 510 (713)
T PRK15399 431 RALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIP 510 (713)
T ss_pred HHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCC
Confidence 77888888877543111121111110 00012222210 12455
Q ss_pred HHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 231 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 231 ~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+..+.+.|.++||.+.-.+...+-+.++...++++++.+++.|.++-+
T Consensus 511 g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 511 AALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred HHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 778999999999999998888888888899999999999999987644
No 364
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.79 E-value=4.7e-07 Score=86.88 Aligned_cols=266 Identities=11% Similarity=0.028 Sum_probs=148.1
Q ss_pred eEEEEecCCCCcccchhcccCC-ccccccCCC-C-CCCcccccCCCHHHHHHHHHhcCCcE---EEEEEccccCCCCccc
Q 021893 4 IIVSCCGCFHGRTLAAISMSCD-NEAIRGFGP-L-LPGHLKVDFGDITALEKIFKESGDQI---AGFLFEPIQGEAGVII 77 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~d~~~le~~i~~~~~~~---~~v~v~~~~~~~G~~~ 77 (306)
.+|.+..+-|=..+-++.+++- +.+..+... + ..+-+....-+.+.+++.|+++++.. ++|+.+|. ..|...
T Consensus 236 d~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT--YdG~~y 313 (714)
T PRK15400 236 STVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST--YDGLLY 313 (714)
T ss_pred CEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC--CccEec
Confidence 3455666666666666666662 222221110 0 01111111225899999999886422 46666553 367787
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCC---c--EEEec--ccccCCcccceeeEeCHHHH-
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRP---D--MVILG--KALGGGVIPVSAVLADKEVM- 148 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~---d--~~s~s--K~~~~G~~~~g~~~~~~~~~- 148 (306)
+ +++|.++|+.++ +++||+|.++......+. ........ | +++-| |.+++=- ..+++..+..+-
T Consensus 314 d----~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alT-QaS~LHvkg~vd~ 386 (714)
T PRK15400 314 N----TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFS-QASMIHVKGDVNE 386 (714)
T ss_pred C----HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccchh-HHhHHHHcCCCCH
Confidence 7 999999999888 689999986422222221 11111112 3 55555 8776322 444454432210
Q ss_pred hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-----------
Q 021893 149 LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG----------- 213 (306)
Q Consensus 149 ~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~----------- 213 (306)
+++... ....+.+++.+-+++...+.+++.. +.+.+...+....+|+.+.++.....+|...+..
T Consensus 387 ~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~ 466 (714)
T PRK15400 387 ETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWP 466 (714)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcc
Confidence 111111 1222334455555666666666653 3356677777777888777654211111111110
Q ss_pred --------------------eeeEEEEEEecCC-------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHH
Q 021893 214 --------------------RGLFNAVEFDKTA-------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNEL 266 (306)
Q Consensus 214 --------------------~g~~~~i~~~~~~-------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i 266 (306)
.-.=+.+..+..+ .+..+..+.+.|.++||.+.-.+...+-+.++...+++++
T Consensus 467 ~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~ 546 (714)
T PRK15400 467 LRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKA 546 (714)
T ss_pred cCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHH
Confidence 0000122222100 2344678899999999999998888888888899999999
Q ss_pred HHHHHHHHHHHh
Q 021893 267 QEGSKALHDVLE 278 (306)
Q Consensus 267 ~~~~~~l~~~l~ 278 (306)
+.+++.|.++-+
T Consensus 547 ~~L~~aL~~f~~ 558 (714)
T PRK15400 547 LSLLRALTDFKR 558 (714)
T ss_pred HHHHHHHHHHHH
Confidence 999999987644
No 365
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.77 E-value=2.1e-07 Score=82.32 Aligned_cols=225 Identities=13% Similarity=0.113 Sum_probs=131.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--c-cccccccccCCC-C
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--R-SGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~-~g~~~~~~~~~~-~ 121 (306)
|.+.+|+.+++.++...+.+++...+..+... +.+++|.++|++||+++++..+|+ +- . ....-.....|. +
T Consensus 140 d~~~ie~~i~~~G~~~iLcvltttscfapr~~---D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~~~GRvd 215 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTTTSCFAPRLP---DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAWRVGRVD 215 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHHHHSTCS
T ss_pred cHHHHHHHHHHhCCCCeEEEEEecCccCCCCC---ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHHhcCCcc
Confidence 58999999998877788889988888877543 349999999999999999999997 10 0 000000001122 2
Q ss_pred CcEEEecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 122 ~d~~s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L 197 (306)
.++-++.|-|--+. +-+.+++ .+..+..+....-......+.+ -. ...+..+.. ..+.....+.-.+++++|
T Consensus 216 a~vqS~dkNF~VPv-Ggai~As~~~~~i~~vs~~YpGRas~sp~l--d~-~itLl~LG~~g~~~ll~~r~~~f~~l~erl 291 (389)
T PF05889_consen 216 AFVQSTDKNFMVPV-GGAIMASFDPSGILAVSKEYPGRASASPSL--DL-FITLLSLGCTGYGALLKERKASFPYLKERL 291 (389)
T ss_dssp EEEEEHHHHHCEES-SHEEEEESSHHHHHHHHHTSHSHBTSHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCEEecC-CCcEEEecCHHHHHHHHHHhhhhhhcccch--HH-HHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 23336668775221 1123444 4566665543222222211222 11 222223332 335667778888888999
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHCCce----eccC---C--------CCEEEEeCCCC
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKERGIL----AKPT---H--------DTIVRLTPPLS 260 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~----~~~~---~--------~~~lRi~~~~~ 260 (306)
++...+....+...+..-..+.+.++... ...+...|...|..+||. +.+. . -.++-++..+.
T Consensus 292 ~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG 371 (389)
T PF05889_consen 292 KKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIG 371 (389)
T ss_dssp HHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT
T ss_pred HHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhC
Confidence 99887765444454444455566665322 113457889999999654 2222 1 26788877789
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 021893 261 ISSNELQEGSKALHDVLE 278 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~ 278 (306)
.+++|++.++++|++.++
T Consensus 372 ~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 372 MTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 999999999999999874
No 366
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.73 E-value=9.3e-07 Score=78.96 Aligned_cols=200 Identities=18% Similarity=0.124 Sum_probs=133.2
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV 138 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~ 138 (306)
++.+.|.++++...+|...+ ++.+.+++++|+|-+-+ + .+..+..+.| +.-+.+..|.+| .- ++
T Consensus 142 ~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~--~s~pid~~~~--dvi~agsQKnlg-P~-Gl 205 (364)
T PRK12462 142 ARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-F--MSRPFDVEAY--GMVYAHAQKNLG-PA-GV 205 (364)
T ss_pred CCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-h--hCCCCChHHc--cEEEeeccccCC-CC-ce
Confidence 35778999999999997764 23334799999998876 2 2334444544 222336669998 33 66
Q ss_pred eeeEeCHHHHhhcCCC-----------CccCCC-CCCHHHHHHHHHHHHHHhhc--c---HHHHHHHHHHHHHHHHHHHH
Q 021893 139 SAVLADKEVMLCIQPG-----------EHGSTF-GGNPLASAVAIASLDVIRDE--K---LAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~aa~~al~~~~~~--~---~~~~~~~~~~~l~~~L~~~~ 201 (306)
+.++.+++.+++.... ....++ +++...+-++..+++++.++ + +.++.++..+.+++.+++..
T Consensus 206 tvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~ 285 (364)
T PRK12462 206 TVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALN 285 (364)
T ss_pred EEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7888999988765432 111233 45566777788999999765 4 56677777777777777764
Q ss_pred hhCCCceeeEEEeeeE-EEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 202 QQFPNYVKEVRGRGLF-NAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.-+. .......+..+ +.|.+.+ .....+|.+.+.++|+.--.++ .+.+|.++--..+.+.++.+++-+++.-+
T Consensus 286 ~~~~-~~~~~~~RS~mnv~f~~~~---~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 286 EVID-CHAHRAARSTMNVAFRFRQ---PRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred Cccc-CCCChhhcCcceEEEEcCC---HHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 2221 11222222222 3444443 3456789999999999876543 46699998888899999999998877655
No 367
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.71 E-value=8.2e-06 Score=70.78 Aligned_cols=232 Identities=16% Similarity=0.140 Sum_probs=136.8
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----ccccccccccccCCC
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----LARSGRMLASDWEEV 120 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~~~~g~~~~~~~~~~ 120 (306)
|++.|+++|++-+ +++..|++.-.+|..|.-+-+-+-++++.++|++||+.++.|.+..- |......- ...|.+
T Consensus 170 D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~g-Yrd~sI 248 (471)
T COG3033 170 DLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPG-YRDWSI 248 (471)
T ss_pred CHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcc-cccccH
Confidence 8999999999865 34666665555555555667888899999999999999999998741 21110000 111111
Q ss_pred ---------CCcEEEec-ccccCCcccce-eeEeCHH----HHhhcCCCC----ccCCCCC-CHHHHHHHHHHHHHHhhc
Q 021893 121 ---------RPDMVILG-KALGGGVIPVS-AVLADKE----VMLCIQPGE----HGSTFGG-NPLASAVAIASLDVIRDE 180 (306)
Q Consensus 121 ---------~~d~~s~s-K~~~~G~~~~g-~~~~~~~----~~~~~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~~ 180 (306)
..|-++.| |.=+ +..+| +++.+.+ +...++... -..+|.+ ..-.+-+....|...-..
T Consensus 249 ~~IarEm~sYaD~~~mS~KKD~--lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~ 326 (471)
T COG3033 249 EEIAREMYSYADGCTMSAKKDG--LVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNF 326 (471)
T ss_pred HHHHHHHHhhhhhheeeccccc--eeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCc
Confidence 12444444 3211 12333 2666655 555555321 1122221 222333333445544455
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe----cCC-ChhhHHHHHHHHHHC-CceeccC------
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD----KTA-LPVSAYDICLKMKER-GILAKPT------ 248 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~----~~~-~~~~~~~~~~~l~~~-Gi~~~~~------ 248 (306)
++..+-.+..++|.+.|++.+ +..-.+..|.-+.++.. ..+ ....++.|+-.|..+ ||-....
T Consensus 327 ~yl~~Rv~Qv~YL~~~l~~~G-----Vpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~ 401 (471)
T COG3033 327 DYLAHRVAQVQYLADGLEEAG-----VPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLG 401 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-----CeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecc
Confidence 577777788899999999884 33344455555555432 211 112366776666544 6665421
Q ss_pred -----------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893 249 -----------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRK 286 (306)
Q Consensus 249 -----------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~ 286 (306)
.-..+|+.++- .-|.+.+|..++.+++..+ .-.++++
T Consensus 402 rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e-~~~~ikg 450 (471)
T COG3033 402 RDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE-NAEDIKG 450 (471)
T ss_pred cCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh-ccccCCC
Confidence 23679999864 4488999999999998888 5544443
No 368
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.69 E-value=3.2e-06 Score=81.31 Aligned_cols=226 Identities=13% Similarity=0.047 Sum_probs=128.6
Q ss_pred CHHHHHHHHHhcCCc-------EEEEEEccccCCCCcccCChhHHHHHHHH-HHHcCCEEEEehhhhcccccccc---cc
Q 021893 46 DITALEKIFKESGDQ-------IAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILMIADEIQSGLARSGRM---LA 114 (306)
Q Consensus 46 d~~~le~~i~~~~~~-------~~~v~v~~~~~~~G~~~~~~~~l~~i~~l-~~~~gi~li~De~~~g~~~~g~~---~~ 114 (306)
+.+.++++|+++++. .+++++..+. ..|...+ +++|.++ |+.++ .|++||+|.+....... ++
T Consensus 261 ~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~yd----i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p 334 (720)
T PRK13578 261 DEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYN----ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCS 334 (720)
T ss_pred cHHHHHHHHHhcCccccccccCceEEEEECCC-Ccceeec----HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCC
Confidence 467799999987322 3544443322 2577777 9999998 78888 99999999863222221 21
Q ss_pred cccCCCCCc----EEEec--ccccCCcccceeeEeCHHHHh---------hcCCCC-ccCCCCCCHHHHHHHHHHHHHHh
Q 021893 115 SDWEEVRPD----MVILG--KALGGGVIPVSAVLADKEVML---------CIQPGE-HGSTFGGNPLASAVAIASLDVIR 178 (306)
Q Consensus 115 ~~~~~~~~d----~~s~s--K~~~~G~~~~g~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~aa~~al~~~~ 178 (306)
.......+| +++-| |.+++-- ..+++..+...++ ++.... ...+.+++.+-+++...+.+++.
T Consensus 335 ~~al~~GaD~p~i~v~QStHKtL~alT-QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~ 413 (720)
T PRK13578 335 PLLLELNENDPGIFVTQSVHKQQAGFS-QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHE 413 (720)
T ss_pred hhhhhcCCCCCCeEEEEChhhcchhhh-hHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 122344666 77665 8776422 5555766443221 222211 12223334444444445455554
Q ss_pred h---ccHHHHHHHHHHHHHHHHHHHHhhCCCc-------------------------eeeEE----E-----------ee
Q 021893 179 D---EKLAERSAHLGEELRQHLFKIQQQFPNY-------------------------VKEVR----G-----------RG 215 (306)
Q Consensus 179 ~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~-------------------------~~~~~----~-----------~g 215 (306)
. ..+.+...+....+|+.+.+....+..+ ..... + .-
T Consensus 414 ~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP 493 (720)
T PRK13578 414 GESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDP 493 (720)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccccccCC
Confidence 3 3356666677777777763322111000 00000 0 00
Q ss_pred eEEEEEEecCC--------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 216 LFNAVEFDKTA--------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 216 ~~~~i~~~~~~--------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.=+.+..+... .+..+..+.+.|+++||.+.-.+...+-+.++...++++++.++++|.++-+
T Consensus 494 ~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 494 CKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred ceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 00112222100 1122678999999999999988888888888899999999999999987755
No 369
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.58 E-value=2.1e-06 Score=74.97 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=122.2
Q ss_pred CHHHHHHHHHhcC--Cc-EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cccc-ccc----
Q 021893 46 DITALEKIFKESG--DQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-ASD---- 116 (306)
Q Consensus 46 d~~~le~~i~~~~--~~-~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~~~-~~~---- 116 (306)
|.++|++.+++.. -+ .++++++|.+ +||. +.+++-+++|..+|.+++++|+.||+|-+..+. +..| ++.
T Consensus 199 d~~el~~~~~eA~k~i~~r~lvvINPGN-PTGq-vls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~ 276 (475)
T KOG0258|consen 199 DVAELERSVDEARKGINPRALVVINPGN-PTGQ-VLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLH 276 (475)
T ss_pred CHHHHHHHHHHHhccCCceEEEEECCCC-ccch-hhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHH
Confidence 7899999998743 22 4555566655 5664 458999999999999999999999999863333 3222 221
Q ss_pred cCC-CCCc---EE---Eeccccc--CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHH----------HHHHH
Q 021893 117 WEE-VRPD---MV---ILGKALG--GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAV----------AIASL 174 (306)
Q Consensus 117 ~~~-~~~d---~~---s~sK~~~--~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a----------a~~al 174 (306)
+.+ -.++ .+ +.||++. .|. |-||+-. .++..+.+.+... ...+.+..+++. +..+.
T Consensus 277 emg~~~~~~v~L~SfhSvSKGy~gECG~-RGGYmEv~n~~prv~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy 354 (475)
T KOG0258|consen 277 EMGNPYPDNVSLASFHSVSKGYMGECGQ-RGGYMESLNRDPRVKQQIKKLAS-IKLCPQVSGQKLVDLVVNPPKPGDPSY 354 (475)
T ss_pred HhcCccCCceEEEeeecccccceeeecc-cCCeeecccCChhHHHHHHHHHh-hhhcCCccchhhhceecCCCCCCCcch
Confidence 111 1222 22 5689887 587 8887633 3554444432100 000111111111 01111
Q ss_pred HHH--hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE---EecCC------ChhhHH-HHHHHHHHC-
Q 021893 175 DVI--RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE---FDKTA------LPVSAY-DICLKMKER- 241 (306)
Q Consensus 175 ~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~---~~~~~------~~~~~~-~~~~~l~~~- 241 (306)
+.. +.+.+.+.++.+++.+.+.++.+. .+.--+..|.|+.+. ++... .+.... -.|..|++.
T Consensus 355 ~~~~~Ekd~il~~l~~ra~l~~~~~ns~~-----gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~t 429 (475)
T KOG0258|consen 355 DLFSSEKDGILSSLRSRAKLTEDAFNSLE-----GISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEAT 429 (475)
T ss_pred hhhhhhhHhHHHHHHHHhHHHHHHHhhcC-----ceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhc
Confidence 111 235577778888888888888763 333334455555443 33211 000111 236777766
Q ss_pred CceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 242 GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 242 Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
||.+.|+ +.-++|.. ..... + +.+++++++..
T Consensus 430 GIcvVPGSGFGQ~~GtyH~R~T---iLp~~-~-~~i~~~~~fH~ 468 (475)
T KOG0258|consen 430 GICVVPGSGFGQKEGTYHFRTT---ILPPG-L-EIIEKFKKFHA 468 (475)
T ss_pred CeEEecCCCCCCCCceeEEEEe---ecCch-h-HHHHHHHHHHH
Confidence 9999986 23467775 23333 4 67777776665
No 370
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.57 E-value=2.3e-06 Score=79.06 Aligned_cols=187 Identities=17% Similarity=0.140 Sum_probs=111.6
Q ss_pred CHHHHHHHHHhcCCcEEE--EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-cCCC-C
Q 021893 46 DITALEKIFKESGDQIAG--FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~--v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-~~~~-~ 121 (306)
|+++|+++|.++ +.. |+.......+|.+=+ +++|.++|+++|+++++|.+++|+...-...... .+++ .
T Consensus 194 d~~~l~~~i~~~---t~~g~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~ 266 (460)
T COG0076 194 DVDALEEAIDEN---TIGGVVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEG 266 (460)
T ss_pred CHHHHHHHHHhh---ccCceEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCC
Confidence 799999999963 444 777777888888877 9999999999999999999999863211100001 1122 3
Q ss_pred CcEEEec--ccccCCcccceeeEeCHH--HHhhcC--CCCcc----CCC----CCCHHHHHHHHHHHHHHhhccHHH---
Q 021893 122 PDMVILG--KALGGGVIPVSAVLADKE--VMLCIQ--PGEHG----STF----GGNPLASAVAIASLDVIRDEKLAE--- 184 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~--~~~~~----~~~----~~~~~~~~aa~~al~~~~~~~~~~--- 184 (306)
.|-++++ |.+...+ ++|+++.+.+ +.+.+. ..... ..+ +.+.-..+++.+.++.+..+++.+
T Consensus 267 vdSIt~d~HK~g~aP~-~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~ 345 (460)
T COG0076 267 VDSITVDGHKYGLAPI-GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLD 345 (460)
T ss_pred ceEEEECcccccCCCC-CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHH
Confidence 3545444 8887777 8888888644 443332 11111 111 223335566667777776555444
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 246 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~ 246 (306)
+..++.+++.+.|++.. ............+.+.+++.. . ...+....+...|-.+.
T Consensus 346 ~~~~~a~~la~~l~~~~----~~e~~~~p~l~~V~fr~~~~~-~-~~~~~~~~~~~~gw~v~ 401 (460)
T COG0076 346 RTLELARYLAEELEKLG----DFELVNEPELPIVAFRLKDDE-D-TLADLSERLDRRGWQVP 401 (460)
T ss_pred HHHHHHHHHHHHHHhCC----CcEeecCCccceEEEEcCCcc-c-chhchHHHHHhcCceee
Confidence 44477777777777763 122233345555666664311 0 13445556655665544
No 371
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.48 E-value=4.3e-05 Score=67.95 Aligned_cols=218 Identities=19% Similarity=0.163 Sum_probs=134.4
Q ss_pred CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE--ehhhhcccccccccc
Q 021893 37 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA--DEIQSGLARSGRMLA 114 (306)
Q Consensus 37 ~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~--De~~~g~~~~g~~~~ 114 (306)
..+...+++|.+.|++. .+ ..+.++++..++.-+....+ +++|.+.+|++|.++++ |-.--++ .
T Consensus 190 ~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L-----L-- 255 (450)
T COG0403 190 IEIEVVDADDLDDLESA-DD--GDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL-----L-- 255 (450)
T ss_pred eEEEEeccchhhhhhhc-cc--cCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc-----c--
Confidence 34577778899999988 43 47999999988865545555 99999999999998874 3222221 1
Q ss_pred cccCCCCCcEEE-----eccccc-CCcccceeeEeCHHHHhhcCCCC----------------------------ccCCC
Q 021893 115 SDWEEVRPDMVI-----LGKALG-GGVIPVSAVLADKEVMLCIQPGE----------------------------HGSTF 160 (306)
Q Consensus 115 ~~~~~~~~d~~s-----~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~----------------------------~~~~~ 160 (306)
-+.-++..|++. |+=.++ ||. -+||+.++++++.++-... -.+..
T Consensus 256 ~pPGe~GADIvvG~~QrfGvPmgfGGP-hag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNI 334 (450)
T COG0403 256 KPPGEFGADIVVGSAQRFGVPMGFGGP-HAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNI 334 (450)
T ss_pred CCccccCCceEEecCcccCCCcCCCCc-ceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhh
Confidence 111234566652 333444 788 8999999999876664321 01111
Q ss_pred CCCHH--HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHH
Q 021893 161 GGNPL--ASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 235 (306)
Q Consensus 161 ~~~~~--~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~ 235 (306)
|.+.. +.+++. .+-++.. .++..++.++..++.++|++...- ..+.....+-.+.+.-. ......+.
T Consensus 335 CTnQaLlA~~As~-y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g-----~~~~~~~fFdt~~v~~~--~~~~~~l~ 406 (450)
T COG0403 335 CTNQALLALAASM-YAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAG-----VELVFDHFFDTFTVRVP--EEVAEALL 406 (450)
T ss_pred hHHHHHHHHHHHH-HHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCc-----eEeccccceeeEEEecc--hhHHHHHH
Confidence 22221 222222 2222333 335677778888888888865311 12222233333333310 13456677
Q ss_pred HHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 236 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 236 ~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+.....|+-++.-....+-+++.=.+++++|+.+++.+....
T Consensus 407 ~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 407 AAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred HHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 777888988887767678888777788999999999887543
No 372
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.39 E-value=2e-05 Score=78.01 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=124.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|++.+ +++++++..++ ..|.+-+ +++|.+++|++|.+++++.-...+ +.. .+.-++..|++
T Consensus 185 ~~~~l~~~~-----~~~~v~~q~Pn-~~G~ied----~~~i~~~~h~~gal~~~~ad~~al---~ll--~~Pge~GaDi~ 249 (939)
T TIGR00461 185 DCSDIKKAV-----DVFGCLLQYPA-TDGSILD----YKQLIDALHSHKSLVSVAADLMAL---TLL--TPPGHYGADIV 249 (939)
T ss_pred cHHHHhhcC-----CEEEEEEECCC-CCeEEec----HHHHHHHHHHcCCEEEEEechHHh---CCc--CCHHHcCCcEE
Confidence 455555444 36666665544 3566666 999999999999999986544311 111 12223456765
Q ss_pred -Eeccccc-----CCcccceeeEeCHHHHhhcCCCC-----ccC---CC---------------CCCHH----HHHH--H
Q 021893 126 -ILGKALG-----GGVIPVSAVLADKEVMLCIQPGE-----HGS---TF---------------GGNPL----ASAV--A 170 (306)
Q Consensus 126 -s~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~-----~~~---~~---------------~~~~~----~~~a--a 170 (306)
..+|.|| ||. -.|++.+++++...+-... +.. .| ..+.+ ++.+ +
T Consensus 250 vg~~q~fg~p~g~GGP-~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a 328 (939)
T TIGR00461 250 LGSSQRFGVPMGYGGP-HAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVA 328 (939)
T ss_pred eeCCCccCCCCCCCCC-ceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHH
Confidence 3446665 577 7889999988776664320 000 00 11111 1111 1
Q ss_pred HHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc
Q 021893 171 IASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 247 (306)
Q Consensus 171 ~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 247 (306)
...+..+..+ ++.+++..+..++.+.|++.+... ... ..+-.+.+.-. ..++.++.+.+.++||.++.
T Consensus 329 ~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~---~~~----~fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~~ 399 (939)
T TIGR00461 329 SSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHEL---INK----TWFDTLTVKVG--NGISSELLKAAEEFNINLRA 399 (939)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcc---cCC----CccceEEEEeC--CCCHHHHHHHHHHCCCeeee
Confidence 2123444443 346677778888888888854221 111 11212222210 13577899999999999987
Q ss_pred CCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 248 THDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 248 ~~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
..++.+++++.-.+|++||+.+++.+.
T Consensus 400 ~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 767799999999999999999999885
No 373
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.36 E-value=1.2e-06 Score=76.19 Aligned_cols=101 Identities=21% Similarity=0.098 Sum_probs=67.3
Q ss_pred CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCCC
Q 021893 46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEV 120 (306)
Q Consensus 46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~~ 120 (306)
|+++|++.++. |..++++|.++..++..|..+++.+.|++|.++|++||+.|++|.+.-.. ...+.. .....-
T Consensus 107 ~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~--~~e~~~ 184 (290)
T PF01212_consen 107 TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVS--LAEIAA 184 (290)
T ss_dssp -HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHH--HHHHHT
T ss_pred CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccccc--HHHHhh
Confidence 79999999998 44679999999999987667889999999999999999999999986421 011111 111113
Q ss_pred CCcEE--EecccccCCcccce-eeEeCHHHHhhc
Q 021893 121 RPDMV--ILGKALGGGVIPVS-AVLADKEVMLCI 151 (306)
Q Consensus 121 ~~d~~--s~sK~~~~G~~~~g-~~~~~~~~~~~~ 151 (306)
..|.+ +++|.++ . +.| .+++++++++..
T Consensus 185 ~~D~v~~~~tK~~g--~-~~Gavl~~~~~~i~~~ 215 (290)
T PF01212_consen 185 GADSVSFGGTKNGG--A-PGGAVLAGNKEFIAKA 215 (290)
T ss_dssp TSSEEEEETTSTT---S-SSEEEEEESHHHHHHH
T ss_pred hCCEEEEEEEcccc--c-ccceEEEechHHHHHH
Confidence 45666 4557655 2 444 477788866543
No 374
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.29 E-value=1.1e-05 Score=71.54 Aligned_cols=124 Identities=17% Similarity=0.181 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEcc--ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEP--IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~--~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
....+++.+|.+ ++++++-.. +...++.. . ++++.++|++||+++++|.+-+...+. .+-..+.....+
T Consensus 144 t~~~d~~~AIne---~ta~llkV~s~~~~f~~~l-~----~~~l~~ia~~~~lpvivD~aSg~~v~~-e~~l~~~la~Ga 214 (395)
T COG1921 144 THLKDYELAINE---NTALLLKVHSSNYGFTGML-S----EEELVEIAHEKGLPVIVDLASGALVDK-EPDLREALALGA 214 (395)
T ss_pred CCHHHHHHHhcc---CCeeEEEEeeccccccccc-c----HHHHHHHHHHcCCCEEEecCCcccccc-ccchhHHHhcCC
Confidence 368999999995 565555333 33344543 4 889999999999999999887543221 111123345678
Q ss_pred cEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh
Q 021893 123 DMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 123 d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 179 (306)
|+++|| |-++ |. +.|++++++++++.++.......+....+.+++..++++.+..
T Consensus 215 DLV~~SgdKllg-GP-qaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 215 DLVSFSGDKLLG-GP-QAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALELYLQ 271 (395)
T ss_pred CEEEEecchhcC-CC-ccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHHcC
Confidence 999998 7665 44 6778999999999888755555555677888888888888866
No 375
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.26 E-value=2.8e-05 Score=66.28 Aligned_cols=217 Identities=15% Similarity=0.238 Sum_probs=127.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-----
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV----- 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~----- 120 (306)
|++.+-..|+..++....++.-..+|+|| +-|++|.+.+|.++.++.+.+-+.|-+|-|| ..|.+- .+.|.+
T Consensus 164 d~e~~Lsdl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~-~DawAiR~fV~ 240 (410)
T KOG1412|consen 164 DLEGFLSDLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLD-ADAWAIRYFVE 240 (410)
T ss_pred cHHHHHHHHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCcc-ccHHHHHHHHh
Confidence 67777777776655555566666799998 5689999999999999999999999999988 233321 222211
Q ss_pred -CCc-EE--Eeccccc-CCcccceeeE--e-CHHHHhhcCCC---CccCCCCCCHHH--HHHHHHHHHHHh-------h-
Q 021893 121 -RPD-MV--ILGKALG-GGVIPVSAVL--A-DKEVMLCIQPG---EHGSTFGGNPLA--SAVAIASLDVIR-------D- 179 (306)
Q Consensus 121 -~~d-~~--s~sK~~~-~G~~~~g~~~--~-~~~~~~~~~~~---~~~~~~~~~~~~--~~aa~~al~~~~-------~- 179 (306)
... ++ ||+|-+| -+- |+|.+. . ++..+..+... ..-.+++ ||++ +-.....|+.-. +
T Consensus 241 ~g~e~fv~QSFaKNfGlYne-RvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArIV~kvL~tP~lre~W~~si 318 (410)
T KOG1412|consen 241 QGFELFVCQSFAKNFGLYNE-RVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARIVHKVLSTPELREQWIQSI 318 (410)
T ss_pred cCCeEEEEhhhhhhcccccc-cccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHHHHHHhcCHHHHHHHHHHH
Confidence 122 22 7889998 465 777432 3 44444333321 1112222 2332 222222222111 0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCC
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPP 258 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~ 258 (306)
.....++.+.+..|++.|.++.-. +.|-..+...|++..--+ .+ .-.+.|.++ .|++.+ .|.+-++
T Consensus 319 k~MssRI~~MR~aLrd~L~aL~TP-GtWDHI~~QiGMFSyTGL-------tp-~qV~~li~~h~vyLl~--~GRInis-- 385 (410)
T KOG1412|consen 319 KTMSSRIKKMRTALRDHLVALKTP-GTWDHITQQIGMFSYTGL-------TP-AQVDHLIENHKVYLLS--DGRINIS-- 385 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-CcHHHHHhhccceeecCC-------CH-HHHHHHHHhceEEEec--CCcEeee--
Confidence 123456666677777777776422 124445566666543222 22 345666655 777766 3444444
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 259 LSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 259 ~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
..+...+++...+|.++.+ .+.
T Consensus 386 -GLN~~NveyVAkAIde~Vr-~~~ 407 (410)
T KOG1412|consen 386 -GLNMKNVEYVAKAIDETVR-AIK 407 (410)
T ss_pred -ccccccHHHHHHHHHHHHH-hhc
Confidence 4566778999999988887 543
No 376
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.25 E-value=6e-05 Score=68.46 Aligned_cols=196 Identities=17% Similarity=0.157 Sum_probs=101.3
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE-Eeccccc-----
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV-ILGKALG----- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~-s~sK~~~----- 132 (306)
+++++|++..++.- |.+-+ +++|.+++|++|.++++ .+- .-.-+... ..-++..|++ ..+|.||
T Consensus 196 ~~~a~v~vq~Pn~~-G~~ed----~~~i~~~~h~~gal~~~-~ad--~~aL~~l~--~Pge~GADI~vg~~Q~fg~p~~~ 265 (429)
T PF02347_consen 196 DDTAAVMVQNPNTF-GVFED----IKEIADIAHAAGALVIV-GAD--PNALGGLK--SPGEYGADIVVGEHQTFGIPMGF 265 (429)
T ss_dssp TTEEEEEEESS-TT-SB--T----HHHHHHHHHHTT-EEEE-CGG--CCGCCTC----GGGGT-SEEEECCTTTT---CC
T ss_pred cCeEEEEeecCCCC-ceEee----HHHHHHHHHHcCCEEEE-ecC--HHHHhCcC--ChhhcCccEEeeCCCCCcccCCC
Confidence 68999999888754 54544 99999999999999986 332 11111111 1112356766 3458776
Q ss_pred CCcccceeeEeCHHHHhhcCCC----------------------------CccCCCCCC-HHHHHHHHHHHHHHhhc---
Q 021893 133 GGVIPVSAVLADKEVMLCIQPG----------------------------EHGSTFGGN-PLASAVAIASLDVIRDE--- 180 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~~~~~~~~----------------------------~~~~~~~~~-~~~~~aa~~al~~~~~~--- 180 (306)
||. .+|++.++++++..+-.. .-....+.| .+...++...+..+..+
T Consensus 266 GGP-~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~ 344 (429)
T PF02347_consen 266 GGP-GAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR 344 (429)
T ss_dssp C-S---EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence 788 899999999887666422 001112222 33333444445555543
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCC
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLS 260 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~ 260 (306)
++.++...+..+++++|++.. . .. ....-.+=.+.... . .....++.+.+...|+.......+.+-+++.=.
T Consensus 345 ~iA~~~~~~A~yl~~~L~~~~-~---~~--~~~~~f~e~v~~~~-~-~~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~ 416 (429)
T PF02347_consen 345 EIAERIHLNAHYLAERLKKIY-G---LP--FDNPFFFEFVVVFS-K-DKEVEELLKRGIEGGLNLRYPDDGALLICVTET 416 (429)
T ss_dssp HHHHHHHHHHHHHHHHHCCTT-B---EC--SSSSSBSSEEEEES-S--HHHHHHHHTT----EEEGGG-SSEEEEE--TT
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C---cc--cCCCCceeeeeecC-C-cHHHHHHHHHHHhcCCCccccCCCeEEEEccCC
Confidence 356677788888888888761 1 11 11111111222221 1 133344666666678666655566999998888
Q ss_pred CCHHHHHHHHHHH
Q 021893 261 ISSNELQEGSKAL 273 (306)
Q Consensus 261 ~t~~~i~~~~~~l 273 (306)
.|++||+.+++.|
T Consensus 417 ~t~edid~lv~~f 429 (429)
T PF02347_consen 417 RTKEDIDRLVEAF 429 (429)
T ss_dssp --HHHHHHHHH--
T ss_pred CCHHHHHHHHhcC
Confidence 9999999999865
No 377
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.22 E-value=0.00014 Score=67.55 Aligned_cols=218 Identities=14% Similarity=0.111 Sum_probs=114.3
Q ss_pred CHHHHHHHHHhcCCc-EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCc
Q 021893 46 DITALEKIFKESGDQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~-~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d 123 (306)
+.+.+++.+.+++.. ..+++.+|.+ .|.... +++|.+.++.+++++.+||++.- ++..+... -.......|
T Consensus 152 ~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~-~~~~~~~~~ 224 (557)
T COG1982 152 PLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLP-ESALNGGAD 224 (557)
T ss_pred CHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCcccccccccCc-chhhhcCce
Confidence 789999999988655 5666665554 577888 99999999999999999999972 22222221 122224457
Q ss_pred EEEec--ccccCCcccceeeEeCHH--H-HhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccH----HHHHHHHHH
Q 021893 124 MVILG--KALGGGVIPVSAVLADKE--V-MLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKL----AERSAHLGE 191 (306)
Q Consensus 124 ~~s~s--K~~~~G~~~~g~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~----~~~~~~~~~ 191 (306)
+++-| |.+++.- ..+++..+.. + .+++.......+.+.+.-.+.|++.+-+.+.. ..+ .+..-+.++
T Consensus 225 ~~tqS~HK~l~alS-QaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~ 303 (557)
T COG1982 225 FVTQSTHKLLAALS-QASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRK 303 (557)
T ss_pred EEEechhhhhhhhh-hhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 77666 7776544 5666766531 0 01111111112222222333333333333322 112 233333444
Q ss_pred HHHHHHHHHHhhCCCceeeE--EEee----------------eEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEE
Q 021893 192 ELRQHLFKIQQQFPNYVKEV--RGRG----------------LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 253 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~--~~~g----------------~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~l 253 (306)
.+++..+... .++.+.... ...+ .=+.+..++ .+..+..+.++|+++|++..-.+...+
T Consensus 304 ~~~~~~~~~~-~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~--~Gipg~~v~~~L~e~gii~e~~~d~~~ 380 (557)
T COG1982 304 ALRRLINEIG-FFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPE--FGIPGAIVAKYLREHGIIPEETGDYSN 380 (557)
T ss_pred HHHHHHHhcC-CeeeccccccCCcccccccccccccceeccccEEEEecCC--CCCcHHHHHHHHHHcCCeeeecCCcee
Confidence 4444444332 110000000 0001 111222222 456788999999999999887765544
Q ss_pred EEeCC-C-CCCHHHHHHHHHHHH
Q 021893 254 RLTPP-L-SISSNELQEGSKALH 274 (306)
Q Consensus 254 Ri~~~-~-~~t~~~i~~~~~~l~ 274 (306)
-+.+. . ..+..+++.+++.++
T Consensus 381 lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 381 LLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred eEEeeeccchHHHHHHHHHHHHH
Confidence 44332 2 344555666655554
No 378
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.19 E-value=2.5e-05 Score=69.26 Aligned_cols=226 Identities=16% Similarity=0.097 Sum_probs=124.7
Q ss_pred CHHHHHHHHHhcCCc---EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKESGDQ---IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~---~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
++++||+.|-+.+.+ +..|-++......|..-+ |+.|+++|.+|++++.+|.+.+|---..........++ .
T Consensus 236 ~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Gier 311 (510)
T KOG0629|consen 236 IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIER 311 (510)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccc
Confidence 589999999976444 566666666666676666 99999999999999999999985101111111112233 2
Q ss_pred CcEEEec--ccccCCcccceeeEeCHH-HHhhcCCCCccCCC-----------CCCH-------HHHHHHHHHHHHHhhc
Q 021893 122 PDMVILG--KALGGGVIPVSAVLADKE-VMLCIQPGEHGSTF-----------GGNP-------LASAVAIASLDVIRDE 180 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~~~-~~~~~~~~~~~~~~-----------~~~~-------~~~~aa~~al~~~~~~ 180 (306)
.+-++.+ |-+|..+ +++.++.+++ +++++.+.....-| +++- .-+.-.+--++.-...
T Consensus 312 a~SvtwnpHK~~gapl-qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~ 390 (510)
T KOG0629|consen 312 ANSVTWNPHKLMGAPL-QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQ 390 (510)
T ss_pred cCceeecHHHhhcCcc-hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccc
Confidence 3445554 8888888 8887777644 55555432111111 0100 0111011111111122
Q ss_pred c---HHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecC-C---C-h-------hhHHHHHHHHHHCCc-
Q 021893 181 K---LAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKT-A---L-P-------VSAYDICLKMKERGI- 243 (306)
Q Consensus 181 ~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~-~---~-~-------~~~~~~~~~l~~~Gi- 243 (306)
+ -.++.-++++++.++|++..... .+... +..-.+..+..++. . . . ..+..+-..+.++|.
T Consensus 391 Gfe~~v~k~~~lA~yl~~~lrer~~~~--~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~ 468 (510)
T KOG0629|consen 391 GFEAQVDKCLRLAEYLYDRLREREGFE--MLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTT 468 (510)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcccce--ehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccce
Confidence 2 35566678888888888875432 22222 22222222222221 0 0 0 112234566677763
Q ss_pred --eeccC--CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHh
Q 021893 244 --LAKPT--HDTIVRLTPP-LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 244 --~~~~~--~~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~ 278 (306)
-..|. .++++|+..+ ...+.+|++.+++.|.+.-+
T Consensus 469 Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 469 MIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred eeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 33453 4678898763 35688999999998876543
No 379
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.16 E-value=1.1e-05 Score=69.91 Aligned_cols=197 Identities=15% Similarity=0.077 Sum_probs=106.8
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccc
Q 021893 60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPV 138 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~ 138 (306)
..-.=+|..+||+.|.+ .+. +++.-+.-+|.|-+|=. ..-.+... ....+.-++|+||.=| +|- |+
T Consensus 137 ~~~IElVTSPNNPDG~l------r~~---V~~g~~~k~I~D~AYYW--PhyTpI~~-~aD~DiMLFT~SK~TGHAGS-R~ 203 (363)
T PF04864_consen 137 SPYIELVTSPNNPDGQL------REA---VLNGSSGKVIHDLAYYW--PHYTPITA-PADHDIMLFTLSKLTGHAGS-RF 203 (363)
T ss_dssp CGEEEEEESS-TTT---------------SSTTTEEEEEEE-TT-S--TTTS---S--B--SEEEEEHHHHCS-GGG--E
T ss_pred CCeEEEEeCCCCCcccc------cch---hcCCCCcceeeeeeeec--ccccccCC-CCCCceEEEEEecccCcccc-cc
Confidence 34555666677777754 222 23455566799988842 11122211 1112233458899888 898 99
Q ss_pred eeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHHHHHHHHHhhCC----
Q 021893 139 SAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--------EKLAERSAHLGEELRQHLFKIQQQFP---- 205 (306)
Q Consensus 139 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--------~~~~~~~~~~~~~l~~~L~~~~~~~~---- 205 (306)
||.+++ +++.+++......++...+--.+.-++..|+.+.+ .++.+.-.+.-+...++|++......
T Consensus 204 GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSL 283 (363)
T PF04864_consen 204 GWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSL 283 (363)
T ss_dssp EEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE
T ss_pred ceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceec
Confidence 998886 66777776544445554444555555555555432 13555555555555556666543221
Q ss_pred ----C----ce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHH
Q 021893 206 ----N----YV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSK 271 (306)
Q Consensus 206 ----~----~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~ 271 (306)
+ .. ........+.|+.+.. ....+-...|++.||..+.+ +..++|++ ...++++.+.+++
T Consensus 284 q~~~~~yC~ff~~~~~psPafAWlkCe~----eed~DC~~~l~~~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~ 357 (363)
T PF04864_consen 284 QKFSPQYCNFFKRVREPSPAFAWLKCER----EEDEDCYAVLREAKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLE 357 (363)
T ss_dssp ---SCEEETTTTCEEE---SEEEEEESS----CGGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHH
T ss_pred CcCCchhccccccccCCCCCeEEEecCC----cccccHHHHHHhCCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHH
Confidence 0 00 1222345666777663 12245566777889888754 57899999 7789999999999
Q ss_pred HHHH
Q 021893 272 ALHD 275 (306)
Q Consensus 272 ~l~~ 275 (306)
+|.+
T Consensus 358 rL~~ 361 (363)
T PF04864_consen 358 RLSK 361 (363)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9874
No 380
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.10 E-value=9.8e-05 Score=66.84 Aligned_cols=150 Identities=25% Similarity=0.268 Sum_probs=84.4
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++|+++|++. +..+.+|+.+.....+|.+=+ +++|.++|+++++++.+|.+++|....-..+..-..++ .
T Consensus 177 d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~ 252 (373)
T PF00282_consen 177 DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIER 252 (373)
T ss_dssp -HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGG
T ss_pred hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhccccceeeeeccccccccccccccccccccccc
Confidence 789999998853 223456777777888888876 99999999999999999999997321111111111122 2
Q ss_pred CcEEEec--ccccCCcccceeeEeCHH-HHh-hcC---CCCc-----------c--CCCCCC-HHHHHHHHHHHHHHhhc
Q 021893 122 PDMVILG--KALGGGVIPVSAVLADKE-VML-CIQ---PGEH-----------G--STFGGN-PLASAVAIASLDVIRDE 180 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~~~-~~~-~~~---~~~~-----------~--~~~~~~-~~~~~aa~~al~~~~~~ 180 (306)
.|-++++ |.++..+ ++|+++.+.+ ... .+. .... . .+...+ ......+..+++.+..+
T Consensus 253 adSit~d~HK~l~~P~-~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~ 331 (373)
T PF00282_consen 253 ADSITIDPHKWLGVPY-GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGRE 331 (373)
T ss_dssp ESEEEEETTTTTS-SS-S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhcCCc-cceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHH
Confidence 3555444 9999888 8998887643 332 221 1100 0 011112 34445566777777666
Q ss_pred cHHHHHH---HHHHHHHHHHHHH
Q 021893 181 KLAERSA---HLGEELRQHLFKI 200 (306)
Q Consensus 181 ~~~~~~~---~~~~~l~~~L~~~ 200 (306)
++.++++ ++.+++++.|++.
T Consensus 332 G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 332 GYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 6555544 4444444444443
No 381
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.09 E-value=6e-06 Score=72.70 Aligned_cols=127 Identities=19% Similarity=0.239 Sum_probs=57.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCC--CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc------ccccccccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGE--AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL------ARSGRMLASDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~--~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~------~~~g~~~~~~~ 117 (306)
.+++.|++|. ++|++++--+.+|. .|.. ..--++++.+++++|++++++|-.-+.+ +-.+.+-..+.
T Consensus 125 ~~~Dye~AI~---e~Ta~ll~Vh~Sn~~i~GFt--~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~ 199 (367)
T PF03841_consen 125 HLSDYEKAIT---ENTAALLKVHTSNFRIQGFT--GEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEY 199 (367)
T ss_dssp -----------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------C
T ss_pred cccccccccc---cccccccccccccccccccc--ccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHH
Confidence 4778899998 57888875553332 2211 2223999999999999999999776422 11222221233
Q ss_pred CCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh
Q 021893 118 EEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 118 ~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 179 (306)
....+|+++|| |-+|| . ..|+++++++++++++.......+...-+.+++..++++.+.+
T Consensus 200 ~~~GaDlV~fSGdKlLGG-P-QaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 200 LAAGADLVTFSGDKLLGG-P-QAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLD 261 (367)
T ss_dssp CCCT-SEEEEETTSSSSS---S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---
T ss_pred hhcCCCEEEEECCCcCCC-C-CeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHH
Confidence 45678999999 76654 5 6788999999999998655555556677888888888887753
No 382
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.03 E-value=0.0013 Score=59.25 Aligned_cols=226 Identities=15% Similarity=0.170 Sum_probs=131.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH-cCCEEEEehhhhccccc-ccccccccCCC-CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLARS-GRMLASDWEEV-RP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~-~gi~li~De~~~g~~~~-g~~~~~~~~~~-~~ 122 (306)
|+..+.+.++ ++|.+++.+-++.++|.+-+ .++|.++..+ +++++.+|.+-+||..+ +.. ....|++ .|
T Consensus 207 D~~k~~~~i~---eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~-~~~~fdFr~p 278 (491)
T KOG1383|consen 207 DPGKVVRMID---ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYL-NEEEFDFRVP 278 (491)
T ss_pred cHHHHHHHhc---cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCcccccccccc-CccccccCCC
Confidence 6777777777 67999999999999997766 9999999999 99999999999998544 221 1234443 23
Q ss_pred cEEEec----cccc-CCcccceeeEeC-HHH-HhhcCC--C-----CccCCCCC--CHHHHHHHHHHHHHHhhccHH---
Q 021893 123 DMVILG----KALG-GGVIPVSAVLAD-KEV-MLCIQP--G-----EHGSTFGG--NPLASAVAIASLDVIRDEKLA--- 183 (306)
Q Consensus 123 d~~s~s----K~~~-~G~~~~g~~~~~-~~~-~~~~~~--~-----~~~~~~~~--~~~~~~aa~~al~~~~~~~~~--- 183 (306)
-+.|.| | +| .-- +++|++.+ +++ .+++.- . ..+-|..+ .....+++.+++--+..+++.
T Consensus 279 ~V~Sisa~~HK-YGl~~~-G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~ 356 (491)
T KOG1383|consen 279 GVTSISADGHK-YGLAPA-GSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENT 356 (491)
T ss_pred CceeEeeccce-eeeeec-CcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHH
Confidence 333333 3 22 111 34556543 333 233321 1 11111122 233455556666555555554
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCC
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSIS 262 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t 262 (306)
+++.+..+.+++.+++.. .+..+.. .. +.+.+... ...+..++...|.+.|-.+-.- .+..+.++....+.
T Consensus 357 ~~ive~~~~l~egie~i~-----~i~i~gk-p~-vs~~~~~s-~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~ 428 (491)
T KOG1383|consen 357 QNIVETARKLREGIENIK-----GIKIVGK-PL-VSFILFGS-NDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHA 428 (491)
T ss_pred HHHHHHHHHHHHhhhccc-----cceecCC-Cc-EEEEEccC-CccchhhhhHHHHhcCcCccccCCCCceEEEEEeeec
Confidence 455566667777777743 2222221 22 23323221 1355668899999998555421 12245555544444
Q ss_pred HH-HHHHHHHHHHHHHhhhcCCCCCCCCC
Q 021893 263 SN-ELQEGSKALHDVLELDLPKMRKPKPA 290 (306)
Q Consensus 263 ~~-~i~~~~~~l~~~l~~~~~~~~~~~~~ 290 (306)
.+ -.++++.-|+++++ ++...+.....
T Consensus 429 ~~~~A~~~v~Di~~~~~-el~~~p~~~~~ 456 (491)
T KOG1383|consen 429 REDVADRFVADIRKVVE-ELKSLPESKTH 456 (491)
T ss_pred cHHHHHHHHHHHHHHHH-HHHhCCCcccC
Confidence 44 47889999999999 88776655443
No 383
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.87 E-value=0.00015 Score=63.60 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=67.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
|.+.+++.++ +++++|++.---...-....+-+.++++.+.+|+ -++++++|++|+.|... .+...+..|
T Consensus 143 D~~~i~~~~~---~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-----~EP~~vGAD 214 (403)
T PF06838_consen 143 DWEAIKKALK---PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-----QEPTEVGAD 214 (403)
T ss_dssp -HHHHHHHHH---TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-----S-GGGGT-S
T ss_pred CHHHHHHhhc---cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-----cCccccchh
Confidence 7999999999 6899999976554444445566778888888876 46899999999877322 223345677
Q ss_pred EE--EecccccCCcccce-eeEeCHHHHhhcC
Q 021893 124 MV--ILGKALGGGVIPVS-AVLADKEVMLCIQ 152 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g-~~~~~~~~~~~~~ 152 (306)
++ |+-|-.|||+++.| |+++++++++.+.
T Consensus 215 l~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 215 LMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA 246 (403)
T ss_dssp EEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred heeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence 66 77799999998888 8999999998653
No 384
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.84 E-value=0.0025 Score=57.43 Aligned_cols=223 Identities=15% Similarity=0.090 Sum_probs=117.9
Q ss_pred CHHHHHHHHHhcCC-cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC-----C
Q 021893 46 DITALEKIFKESGD-QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-----E 119 (306)
Q Consensus 46 d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~-----~ 119 (306)
+.+.|+++|++.-. -..-+++....+.|+.- .-+.|.+|..+|+++|++|.+|.+|+|- .+.++++ |
T Consensus 218 r~~~L~~AIe~D~arGlIPf~v~at~GTT~~c--a~D~l~elg~Vc~~~glWLHVDAAYAGs-----a~iCpE~r~l~rG 290 (511)
T KOG0628|consen 218 RGDTLRKAIEEDIARGLIPFFVCATLGTTSSC--AFDELEELGPVCREEGLWLHVDAAYAGS-----AFICPEFRYLMRG 290 (511)
T ss_pred CHHHHHHHHHHHHhCCCccEEEEEeecCcccc--ccccHHHhcchhhhcCEEEEeehhhccc-----cccCHHHHHHhhc
Confidence 57899999986321 12223344444445432 4556999999999999999999999852 1112211 1
Q ss_pred C-CCcEE--Eeccccc-----------CCcccce-eeEeCHHHHhhcCC-----CCccCCCCCCHHHHHHHHHHHHHHhh
Q 021893 120 V-RPDMV--ILGKALG-----------GGVIPVS-AVLADKEVMLCIQP-----GEHGSTFGGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 120 ~-~~d~~--s~sK~~~-----------~G~~~~g-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~aa~~al~~~~~ 179 (306)
+ ..|-+ -.+|.+- .|. .+. +..+++.-.+.-.. ..+.+.-.+-.+-..=.+-.++.+..
T Consensus 291 ie~aDSfn~n~hK~~~vnfDCs~lWvkd~~-~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gv 369 (511)
T KOG0628|consen 291 IEYADSFNFNPHKWLLVNFDCSPLWVKDGT-KLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGV 369 (511)
T ss_pred chhhccccCChhheeEEeeeeecceeecCc-eeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhH
Confidence 1 01111 1223332 222 222 12222222211111 11111111222222233344555555
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC-ceeccC---CCCEEE
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG-ILAKPT---HDTIVR 254 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G-i~~~~~---~~~~lR 254 (306)
+++++++++..+.. +..+.+...-+ ..+...+..|+++ |.+... +...+++.+++.+.| |.+.|. +.-.||
T Consensus 370 e~lq~~iR~h~~La-~~fe~lv~~d~~FE~~~~~~lgLvc-FRlk~~--N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlR 445 (511)
T KOG0628|consen 370 ENLQNYIREHVRLA-KEFETLVRADPRFEIVNKRILGLVC-FRLKGD--NEINEALLNRLNSSGRIHLVPASLHGKFVLR 445 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhcCCcceeecccccceeE-EeecCC--cHHHHHHHHHHHhcCcEEEEEeeecceEEEE
Confidence 76777776655444 44555443221 1122334455543 334432 456778888888775 666664 456799
Q ss_pred EeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893 255 LTPP-LSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 255 i~~~-~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++.. ..++.+|++++.+.|.+... .+
T Consensus 446 f~V~s~~t~~~di~~a~~~I~~~a~-~l 472 (511)
T KOG0628|consen 446 FAVCSPLTNESDIDEAWKIIFEAAD-EL 472 (511)
T ss_pred EEecCCCCcHHHHHHHHHHHHHHHH-HH
Confidence 9974 34577899999999988887 64
No 385
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0023 Score=56.03 Aligned_cols=212 Identities=15% Similarity=0.142 Sum_probs=117.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|-+.||+.-.. =+++++++-.- . +....+ ..+++++|.+-|.+|++|=+|- |+...|.. .+.++. .|+
T Consensus 177 DYD~Le~~A~~--frPk~iiaG~S-a-Y~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vi--psPFey-~Di 245 (477)
T KOG2467|consen 177 DYDKLEKTATL--FRPKLIIAGTS-A-YSRLID----YARFRKIADKVGAYLMADMAHISGLVAAGVI--PSPFEY-CDI 245 (477)
T ss_pred ehHHHHHHHHh--cCCcEEEeccc-c-chhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhcccC--CCcccc-cce
Confidence 45666665554 24556655322 2 222344 8999999999999999999995 66444432 122222 365
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhc-C------------------CCCccCCCCCCHHHHHHHHHHHHHHhhc---
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCI-Q------------------PGEHGSTFGGNPLASAVAIASLDVIRDE--- 180 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~aa~~al~~~~~~--- 180 (306)
+ +.-|++-|. |.|.+..++.+...= + +..+++ ++.-.+++...||++..+.
T Consensus 246 VTTTTHKsLRGP--Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGG---PHNhtIaalAvALkQa~tpefk 320 (477)
T KOG2467|consen 246 VTTTTHKSLRGP--RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGG---PHNHTIAALAVALKQAMTPEFK 320 (477)
T ss_pred eeccccccccCC--cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCC---CCcchHHHHHHHHHhhCCHHHH
Confidence 5 445888643 445466655432111 0 001111 1222344444566666653
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCC-ChhhHHHHHHHH---HHCCceecc---CCCCE
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTA-LPVSAYDICLKM---KERGILAKP---THDTI 252 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~-~~~~~~~~~~~l---~~~Gi~~~~---~~~~~ 252 (306)
.+.+++.++.+.+.+.|.+.+ ......+ ...++.+++.+.. .+...+.+++.+ ..+.-+.+. -.++.
T Consensus 321 ~Yq~qV~~Nakala~~l~~~G-----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgG 395 (477)
T KOG2467|consen 321 EYQKQVLKNAKALASALISRG-----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGG 395 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCc
Confidence 367788888888888888874 2223333 4455666666532 223344444433 222222221 24677
Q ss_pred EEEeCCCCC----CHHHHHHHHHHHHHHHh
Q 021893 253 VRLTPPLSI----SSNELQEGSKALHDVLE 278 (306)
Q Consensus 253 lRi~~~~~~----t~~~i~~~~~~l~~~l~ 278 (306)
+|+.-+..+ .++|.+...+-|.++++
T Consensus 396 iRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 396 IRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 999876544 45777777777777765
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0052 Score=57.75 Aligned_cols=215 Identities=16% Similarity=0.182 Sum_probs=135.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh----cccccccccccccCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS----GLARSGRMLASDWEEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~----g~~~~g~~~~~~~~~~~ 121 (306)
|+.+|++.-++|.++.+++.|.-+...+ + -++-++.++++.++||=-+..|.+-. |+.+.|. +.
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST~G--v--fE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd--------~G 733 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPSTHG--V--FEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGD--------IG 733 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccccc--c--ccccHHHHHHHHHhcCCEEEecCCCccceecccCCcc--------cc
Confidence 8999999999998889999887766544 3 24559999999999999999997653 4433332 33
Q ss_pred CcEE--Eeccccc-----CCcccceeeEeCHHHHhhcCCCCc-----------cCCC----CCCHHHHHHHHHHHHHHhh
Q 021893 122 PDMV--ILGKALG-----GGVIPVSAVLADKEVMLCIQPGEH-----------GSTF----GGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 122 ~d~~--s~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~~~aa~~al~~~~~ 179 (306)
.|+. -+-|.|+ ||. .+|=+.+++.+.-.+-.... .++. .++..-+...++.++++..
T Consensus 734 aDV~HLNLHKTFcIPHGGGGP-g~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~ 812 (1001)
T KOG2040|consen 734 ADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGS 812 (1001)
T ss_pred ccceeecccceeeecCCCCCC-CCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcc
Confidence 4444 3346664 455 66656555554433321100 0111 2344556667788888877
Q ss_pred ccH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE---EEEEEecCC--ChhhHHHHHHHHHHCCceecc---C
Q 021893 180 EKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF---NAVEFDKTA--LPVSAYDICLKMKERGILAKP---T 248 (306)
Q Consensus 180 ~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---~ 248 (306)
.++ .+...-+..++.++|+.-... ......|.+ +.+++.+-+ .+.++.+++++|.+-|...-. .
T Consensus 813 ~GL~~as~~AiLNaNYMakRLe~hYki-----l~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswP 887 (1001)
T KOG2040|consen 813 GGLKDASKIAILNANYMAKRLESHYKI-----LFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWP 887 (1001)
T ss_pred cccchhhHHHhhhhHHHHHHHhhccce-----eEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccc
Confidence 543 333345667777777775311 111222221 222222211 346788999999999977432 2
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
-.+.+.+-|.-.-+++++|++++++-.+-+
T Consensus 888 V~gtLMIEPTESE~k~ElDRfcdAliSIre 917 (1001)
T KOG2040|consen 888 VAGTLMIEPTESEDKAELDRFCDALISIRE 917 (1001)
T ss_pred cCCceEeccCccccHHHHHHHHHHHHHHHH
Confidence 367899998878888999999999866655
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.60 E-value=0.0057 Score=53.77 Aligned_cols=197 Identities=15% Similarity=0.115 Sum_probs=117.6
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccc
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV 138 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~ 138 (306)
.+-|..+++...+|..++.... ... +.++++|-+-.-+ +..+ +.. +-|++ +..|-+|+- ++
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~------~~~--~~~~v~D~SS~il---sr~i--Dvs--k~dviyagaQKnlGpa--Gl 207 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPD------IGS--DGLLVADASSAIL---SRPI--DVS--KYDVIYAGAQKNLGPA--GL 207 (365)
T ss_pred ccEEEEecCCcccceEccCCCC------CCC--CceEEEecccHHh---cCCC--Chh--HcceEEEehhhccCcc--ce
Confidence 3346666666666766553221 111 1677777554311 1111 111 22444 445999832 24
Q ss_pred eeeEeCHHHHhhcCCC------------CccCCCC-CCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHHHHHH
Q 021893 139 SAVLADKEVMLCIQPG------------EHGSTFG-GNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 139 g~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+.++.++++.+++.+. ....+|. ++..+.-.+..+++++... .+.++.++..+.|.+.+.+-.
T Consensus 208 tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~ 287 (365)
T COG1932 208 TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD 287 (365)
T ss_pred EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6678899999887653 1233443 3445666677889999873 356677777777777777652
Q ss_pred hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+...+....-+-+-+.|.+.+ ......|.+.+.++|+..-.+ ..+.+|+++-...+.++++.+++.++.+.+
T Consensus 288 -fy~~~v~~~~RS~mnV~f~~~~---~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 288 -FYRNLVAKANRSRMNVTFTLVD---AELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred -ccccccchhhccceeEEEEcCc---HHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 2211222211122223555553 344567888888888776544 244599998888899999999998887765
No 388
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.52 E-value=0.00024 Score=59.36 Aligned_cols=229 Identities=18% Similarity=0.192 Sum_probs=117.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--cccccc-cCCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASD-WEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~~-~~~~~~ 122 (306)
|++.+++.+++.++...+.+.....+-.. -+++-+++|..+|..|+++-|+.++|+ +.... ...... .-| ..
T Consensus 142 dleav~~~iee~g~dcilci~sttscfap---r~pd~leaiaaica~~diphivnnayg-lqsee~i~~iaa~~~~g-ri 216 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSCFAP---RSPDNLEAIAAICAAHDIPHIVNNAYG-LQSEECIHKIAAAAECG-RI 216 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecccccCC---CCCchHHHHHHHHHccCchhhhccccc-cchHHHHHHHHHHhhhc-cH
Confidence 79999999999887776666655544332 245669999999999999999999995 10000 001000 011 22
Q ss_pred cEE--EecccccCCcccce--eeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893 123 DMV--ILGKALGGGVIPVS--AVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~--s~sK~~~~G~~~~g--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L 197 (306)
|.+ |+-|.|. .|+| .+.+ +..+++.+.+...+.....+..-+...+-.+-.-.-.+....-++.-.+++..+
T Consensus 217 da~vqsldknf~---vpvggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki 293 (432)
T KOG3843|consen 217 DAFVQSLDKNFM---VPVGGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKI 293 (432)
T ss_pred HHHHHHhhhcce---eecchhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Confidence 322 6667776 1222 1222 455555554322222222222222221111100000112223333334444555
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChh--hHHHHHHHHHHCCce---eccC----------------------CC
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV--SAYDICLKMKERGIL---AKPT----------------------HD 250 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~--~~~~~~~~l~~~Gi~---~~~~----------------------~~ 250 (306)
.+..+.+.+.+..++..-..+.+.+...+... ....|...|..+||. +.|. +.
T Consensus 294 ~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~ 373 (432)
T KOG3843|consen 294 IKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHC 373 (432)
T ss_pred HHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCch
Confidence 55544443344444443333333333211111 123566777777643 3331 12
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++-.+.....+..|+++++.||.+.+. .+.+
T Consensus 374 ~yln~a~aigm~~hdld~~~~rl~~~~a-~~~k 405 (432)
T KOG3843|consen 374 AYLNAACAIGMKDHDLDEFFNRLDRCLA-AFRK 405 (432)
T ss_pred hHhhHHHhcCCcHhHHHHHHHHHHHHHH-HHHH
Confidence 3444555567888999999999988887 5543
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.43 E-value=0.0064 Score=60.51 Aligned_cols=202 Identities=14% Similarity=0.072 Sum_probs=119.1
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE-E
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV-I 126 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~-s 126 (306)
+++++.+. +++.++++..++. .|.+.+ +++|.+++|++|.++|+- + +.-.-+... ..-++..|++ .
T Consensus 199 ~~~~~~~~---~~~~~v~vq~P~~-~G~i~d----~~~i~~~~h~~gal~~~~-~--d~laL~ll~--~Pge~GADI~vG 265 (954)
T PRK12566 199 DAVDNLAA---HAVFGALLQYPDT-HGEIRD----LRPLIDQLHGQQALACVA-A--DLLSLLVLT--PPGELGADVVLG 265 (954)
T ss_pred cchhhcCC---CCEEEEEEECCCC-ceEEcc----HHHHHHHHHHcCCEEEEE-e--CHHHHhCCC--ChhhcCCcEEee
Confidence 34444443 4688888866654 455656 999999999999987732 1 110011111 1123456765 3
Q ss_pred eccccc-----CCcccceeeEeCHHHHhhcCCCCcc----------------------------CCCCCCH-H-HHHHHH
Q 021893 127 LGKALG-----GGVIPVSAVLADKEVMLCIQPGEHG----------------------------STFGGNP-L-ASAVAI 171 (306)
Q Consensus 127 ~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~-~-~~~aa~ 171 (306)
.++.|| ||. -.|++.+++++..++-....+ ...+.+. + +..++.
T Consensus 266 ~~Q~fGvp~~~GGP-~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~ 344 (954)
T PRK12566 266 STQRFGVPMGYGGP-HAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGF 344 (954)
T ss_pred CCCcCCCCCCCCCC-CeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 345555 777 789999999887766432100 0011111 1 222222
Q ss_pred HHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC
Q 021893 172 ASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 248 (306)
Q Consensus 172 ~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~ 248 (306)
. +-.+..++ +.+++..+..++.+.|.+.+... .....+-.+.+.- +....++.+...++|+-++-.
T Consensus 345 Y-~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~-------~~~~fF~~~~v~~---~~~~~~~~~~a~~~~~n~r~~ 413 (954)
T PRK12566 345 Y-AVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKR-------LNRHFFDTLTLEV---GGAQAAIIESAEAARINLRIL 413 (954)
T ss_pred H-HHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcc-------ccCCccceEEEEc---cCCHHHHHHHHHHCCCeeEEe
Confidence 1 11222333 45567777778888888853221 1112222333331 114667889999999988877
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 249 HDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 249 ~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
+++.+.+++.=.++.+|++.+++.+.
T Consensus 414 ~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 77889999888899999999999884
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.07 E-value=0.0097 Score=50.96 Aligned_cols=99 Identities=16% Similarity=0.205 Sum_probs=69.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCCc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
|.+.++..++ ++|++|.+.-.....-.-..+-+.++++.++.++- ++++++|++|+.|... .+...+..|
T Consensus 154 D~~~v~~~i~---~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-----~EPt~vGaD 225 (416)
T COG4100 154 DIQAVKTAIS---DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-----KEPTHVGAD 225 (416)
T ss_pred cHHHHHHhcC---ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-----cCccccchh
Confidence 7888988888 68999998664332211122455678888888774 5899999999877322 222345667
Q ss_pred EE--EecccccCCcccce-eeEeCHHHHhhcC
Q 021893 124 MV--ILGKALGGGVIPVS-AVLADKEVMLCIQ 152 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g-~~~~~~~~~~~~~ 152 (306)
++ |+-|..|||+...| |++++++++++..
T Consensus 226 liAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 226 LIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 65 77799998887776 7899999987653
No 391
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=96.99 E-value=0.02 Score=54.95 Aligned_cols=150 Identities=19% Similarity=0.207 Sum_probs=88.8
Q ss_pred CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHH---HHcCC--EEEEehhhhccccc------cc
Q 021893 46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC---SKYNI--LMIADEIQSGLARS------GR 111 (306)
Q Consensus 46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~---~~~gi--~li~De~~~g~~~~------g~ 111 (306)
|++.|++.|++ .+..+.+|+..-....+|.+=+ +++|.++| +++|+ ++.+|.+|+|+... +.
T Consensus 261 d~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~ 336 (608)
T TIGR03811 261 DINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDN 336 (608)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccc
Confidence 79999999975 2334566666667777887766 88888887 77998 69999999985310 00
Q ss_pred cccc---------------------c-----cCCC-CCcEEEec--ccccCCcccceeeEeCH-HHHhhcCC---CC--c
Q 021893 112 MLAS---------------------D-----WEEV-RPDMVILG--KALGGGVIPVSAVLADK-EVMLCIQP---GE--H 156 (306)
Q Consensus 112 ~~~~---------------------~-----~~~~-~~d~~s~s--K~~~~G~~~~g~~~~~~-~~~~~~~~---~~--~ 156 (306)
..+. + ..++ ..|-+++. |.+.-.+ ++|.++.+. .+.+.+.- .. .
T Consensus 337 ~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py-~~G~ll~Rd~~~~~~~~~~a~Yl~~~ 415 (608)
T TIGR03811 337 FIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY-SAGGIVIQDIRMRDVISYFATYVFEK 415 (608)
T ss_pred ccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCC-CeEEEEEeCHHHHHHHhcCcchhccc
Confidence 0000 0 0011 23545444 8887777 888777764 43333311 10 0
Q ss_pred c-------C--CCCCCH--HHHHHHHHHHHHH--hhc---cHHHHHHHHHHHHHHHHHHH
Q 021893 157 G-------S--TFGGNP--LASAVAIASLDVI--RDE---KLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 157 ~-------~--~~~~~~--~~~~aa~~al~~~--~~~---~~~~~~~~~~~~l~~~L~~~ 200 (306)
. . +..++. ...++...+++.+ ..+ ++.++..++.+++.+.|++.
T Consensus 416 ~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 416 GADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred cccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 0 112222 3355566777776 333 35566667777777777774
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.52 E-value=0.008 Score=52.39 Aligned_cols=213 Identities=19% Similarity=0.238 Sum_probs=111.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----cccc---C
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDW---E 118 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~~---~ 118 (306)
|.+.+-+.+.+.++.-.+++--..+|+|| +-|+.|.+++|.++.++.+.+-++|-+|.|| ..|..- +... .
T Consensus 184 d~~g~ledl~~~p~gs~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR~F~~~ 261 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEGSIILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVRLFVED 261 (427)
T ss_pred chHHHHHHHhcCCCCcEEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHHHHHHc
Confidence 56665566666555555555566788898 6789999999999999999999999999987 233321 1111 1
Q ss_pred CCCCcEE-Eeccccc-CCcccceee---EeCHHHHhhcCCC---CccCCCCCCHH-HHHHHHHHHHHHhh----------
Q 021893 119 EVRPDMV-ILGKALG-GGVIPVSAV---LADKEVMLCIQPG---EHGSTFGGNPL-ASAVAIASLDVIRD---------- 179 (306)
Q Consensus 119 ~~~~d~~-s~sK~~~-~G~~~~g~~---~~~~~~~~~~~~~---~~~~~~~~~~~-~~~aa~~al~~~~~---------- 179 (306)
+...-+. |++|-+| =|- |+|.+ +-+++...+.... .....|+.+++ +...+. .++.+
T Consensus 262 g~~~~laQSyAKNMGLYgE-RvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~---~Il~d~~l~~~W~~e 337 (427)
T KOG1411|consen 262 GHEILLAQSYAKNMGLYGE-RVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVA---TILSDPDLKNQWLGE 337 (427)
T ss_pred CCceEeehhhhhhcchhhh-ccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhh---hccCChHHHHHHHHH
Confidence 2222222 7889998 344 67744 2244433332211 11112222222 111111 11111
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCC
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPP 258 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~ 258 (306)
....+++...+..+.+.|+...... .|.......|+++.--+ ..+++-..-.+.-|+... ++ |++.+
T Consensus 338 vk~MadRi~~mR~~L~d~L~~~gs~~-~W~hI~~QIGMF~fTgl-------~peQv~~l~ke~~iYmT~--dG--RiS~a 405 (427)
T KOG1411|consen 338 VKGMADRIISMRQQLFDALEKEGSPG-NWSHITKQIGMFCFTGL-------NPEQVDWLTKEYHIYLTK--DG--RISMA 405 (427)
T ss_pred HHHHHHhhhhhHHHHhHHhhcCCCCc-cHHHHHHhhheeeecCC-------CHHHHHHHHhhheeeecc--Cc--eEeec
Confidence 1123444455555555555443222 23334455666544322 233333333455777754 33 45543
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 021893 259 LSISSNELQEGSKALHDVL 277 (306)
Q Consensus 259 ~~~t~~~i~~~~~~l~~~l 277 (306)
..+...+.++.++|.+.-
T Consensus 406 -G~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 406 -GLSSSNVPYLADAIHAVT 423 (427)
T ss_pred -cccccCCcccchhhHhHh
Confidence 345566777777665443
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=90.08 E-value=14 Score=35.69 Aligned_cols=195 Identities=14% Similarity=0.199 Sum_probs=110.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE-Eeccccc-----
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV-ILGKALG----- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~-s~sK~~~----- 132 (306)
+++..+++.-+... |.+.+ ..++.+++++.+.++++-.-.-.+ ...-+.-++..|+. ..|..||
T Consensus 246 ~~v~gvlvQYP~t~-G~i~d----~~el~~~a~~~~s~vv~atDLLaL-----tiLrpPgefGaDIavGSsQRFGVPlGY 315 (1001)
T KOG2040|consen 246 KDVSGVLVQYPDTE-GSVLD----FDELVELAHANGSLVVMATDLLAL-----TILRPPGEFGADIAVGSSQRFGVPLGY 315 (1001)
T ss_pred cceeEEEEEcCCCC-CcccC----HHHHHHHhhccCceEEEeehhhHH-----HccCChhhcCceeeeccccccCccccC
Confidence 46888888766554 55777 899999999999887743211100 00011123445655 3334444
Q ss_pred CCcccceeeEeCHHHHhhcCCCCccCC-----------------------C-CCCHHHHHHHHHHHHHHhh--------c
Q 021893 133 GGVIPVSAVLADKEVMLCIQPGEHGST-----------------------F-GGNPLASAVAIASLDVIRD--------E 180 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~aa~~al~~~~~--------~ 180 (306)
||. -.||+.+++++...+-..-.+.+ - +.|.=.+.|.++-+..+-. +
T Consensus 316 GGP-HAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~ 394 (1001)
T KOG2040|consen 316 GGP-HAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLK 394 (1001)
T ss_pred CCc-hHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHH
Confidence 565 66677777666544332100000 0 1122222233333333211 3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCC
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLS 260 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~ 260 (306)
++..++......|...|+..+.+. .....+-.+.+. .+...+++.....+++|-++--..+.+-+++.-.
T Consensus 395 ~IArrvh~~T~~l~~~l~~aghel-------~~k~fFDTLkI~---~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDET 464 (1001)
T KOG2040|consen 395 EIARRVHNLTLILAEGLKNAGHEL-------QHKPFFDTLKIR---CGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDET 464 (1001)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhh-------ccccccceEEEE---ecCcHHHHHHHHHhhcCceEEeecCceEEeeccc
Confidence 356667777777777777765321 111122122222 1235778888888888888777778888888778
Q ss_pred CCHHHHHHHHHHHH
Q 021893 261 ISSNELQEGSKALH 274 (306)
Q Consensus 261 ~t~~~i~~~~~~l~ 274 (306)
.+++|++.++..+.
T Consensus 465 v~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 465 VTEKDVDDLLWVFN 478 (1001)
T ss_pred ccHHHHHHHHHHHc
Confidence 89999999998885
No 394
>smart00642 Aamy Alpha-amylase domain.
Probab=78.24 E-value=8.5 Score=30.54 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc-----------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV-----------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~-----------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|++.+.+.|.... -.+.+|.+.|++..... ...+.+.++++++.||++|+-+|.|-+..
T Consensus 16 G~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 16 GDLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45666666544221 24678888887543310 23466889999999999999999998765
No 395
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=75.70 E-value=9.3 Score=32.67 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=43.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCc--ccCChhHHHHHHHHHHHcCCEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGV--IIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~--~~~~~~~l~~i~~l~~~~gi~li 98 (306)
.+.|.+++..++.....+|++|.++++.. -.++..+..+|.+|-+.-|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 67888889988777899999999988743 34899999999999877777776
No 396
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=74.70 E-value=4.7 Score=34.23 Aligned_cols=48 Identities=10% Similarity=0.236 Sum_probs=36.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
+.+.+++.+. +.-++++-|.....-. -...++.|.+.++..++++++|
T Consensus 91 av~~i~k~L~----RlhavVIGPGLGRdp~---~~k~i~~iley~~~~dvP~VID 138 (306)
T KOG3974|consen 91 AVDIIEKLLQ----RLHAVVIGPGLGRDPA---ILKEIAKILEYLRGKDVPLVID 138 (306)
T ss_pred hHhHHHHHHh----heeEEEECCCCCCCHH---HHHHHHHHHHHHhcCCCcEEEc
Confidence 4667777776 6788888887765432 2344788889999999999999
No 397
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=71.13 E-value=35 Score=29.67 Aligned_cols=144 Identities=13% Similarity=0.087 Sum_probs=76.4
Q ss_pred ccccc-CCcccceeeEeCHHHHhhcCCC-----------CccCCC-CCCHHHHHHHHHHHHHHhhcc----HHHHHHHHH
Q 021893 128 GKALG-GGVIPVSAVLADKEVMLCIQPG-----------EHGSTF-GGNPLASAVAIASLDVIRDEK----LAERSAHLG 190 (306)
Q Consensus 128 sK~~~-~G~~~~g~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~aa~~al~~~~~~~----~~~~~~~~~ 190 (306)
.|.+| .|. -.++.+++++....+. ....-| +.+..++-+..-.++++.+.+ ..+...+..
T Consensus 204 QKN~G~aG~---Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~Ks 280 (370)
T KOG2790|consen 204 QKNVGPAGV---TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKS 280 (370)
T ss_pred ccccCcccc---EEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHH
Confidence 46665 233 3456788877654332 111112 233345555556677776633 334444555
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeE-EEEEEecCCChhhHHHHHHHHHHCCceecc--CCCCEEEEeCCCCCCHHHHH
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLF-NAVEFDKTALPVSAYDICLKMKERGILAKP--THDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~--~~~~~lRi~~~~~~t~~~i~ 267 (306)
+.+.+.+.+-..-+ ....+...+.-| +.|.+.+ ..-..+|.+...++++.--. +.-+.+|-++-...+.++.+
T Consensus 281 kllYd~iD~s~gfy-~cpVe~~~RS~MNV~Fri~~---d~Le~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q 356 (370)
T KOG2790|consen 281 KLLYDAIDNSNGFY-RCPVEPSVRSRMNVPFRIEK---DELEAEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQ 356 (370)
T ss_pred HHHHHHHHhcCCeE-Ecccchhhhhhcccceeecc---hHHHHHHHHHHHHhhhhccccccccccchhhhhccccHHHHH
Confidence 66666665542222 012222222222 3444443 23344566666666544322 34567999987788999999
Q ss_pred HHHHHHHHHHh
Q 021893 268 EGSKALHDVLE 278 (306)
Q Consensus 268 ~~~~~l~~~l~ 278 (306)
.+++-+++..+
T Consensus 357 ~L~~~m~~F~k 367 (370)
T KOG2790|consen 357 KLAAFMKEFQK 367 (370)
T ss_pred HHHHHHHHHHH
Confidence 98888877655
No 398
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=69.14 E-value=15 Score=28.31 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=33.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc-CCEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMI 98 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li 98 (306)
.+.|++.++..++..+++++.+.. + ..+..++-+.+.++|++| ++.++
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~~-~---~~~~~~~n~~~~~~a~~~~~v~~i 114 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPHV-P---RPWEPDVNAYLLDAAKKYKNVTII 114 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECCC-C---cchHHHHHHHHHHHHHHCCCcEEe
Confidence 578888888765557788877752 1 223567778889999999 55444
No 399
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=66.05 E-value=8.4 Score=37.32 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=30.5
Q ss_pred ccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc
Q 021893 76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~ 111 (306)
+..+++-++++++-|+++||-||+|=++.-|+..+.
T Consensus 209 ryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 209 RYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 355889999999999999999999999987655443
No 400
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=64.96 E-value=17 Score=30.08 Aligned_cols=49 Identities=16% Similarity=0.296 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEeh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De 101 (306)
++.+|++++. .+.++-+=.-...+-.. .+..+++.++|++|++.|++++
T Consensus 24 ~~~ve~al~~---Gv~~vQlR~K~~~~~~~---~~~a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 24 LEWVEAALKG---GVTAVQLREKDLSDEEY---LALAEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHhC---CCeEEEEecCCCChHHH---HHHHHHHHHHHHHhCCeEEecC
Confidence 7889999983 44444443332222111 4557899999999999998765
No 401
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=62.72 E-value=31 Score=23.81 Aligned_cols=47 Identities=11% Similarity=0.167 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+...+.|+. .+.++|++-..- ++...+.+.++|+.++++++......
T Consensus 14 ~~vlkaIk~--gkakLViiA~Da--------~~~~~k~i~~~c~~~~Vpv~~~~t~~ 60 (82)
T PRK13601 14 KQTLKAITN--CNVLQVYIAKDA--------EEHVTKKIKELCEEKSIKIVYIDTMK 60 (82)
T ss_pred HHHHHHHHc--CCeeEEEEeCCC--------CHHHHHHHHHHHHhCCCCEEEeCCHH
Confidence 445566664 467888876553 34558999999999999998666554
No 402
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=61.97 E-value=39 Score=23.25 Aligned_cols=48 Identities=8% Similarity=0.048 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.++..+.|+. .+.++|++-... ++...+.+.++|++++++++.-....
T Consensus 16 ~~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~s~~ 63 (82)
T PRK13602 16 TKQTVKALKR--GSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVDSMK 63 (82)
T ss_pred HHHHHHHHHc--CCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 3456667765 467777776554 23448999999999999998655443
No 403
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=60.57 E-value=48 Score=25.24 Aligned_cols=58 Identities=24% Similarity=0.321 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHH-HHHHc-CCEEE-Eehhhh
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD-LCSKY-NILMI-ADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~-l~~~~-gi~li-~De~~~ 104 (306)
.+++.|.+.++++ ++..+++=-+.++.|..-......++..+ +..++ ++.++ +||-++
T Consensus 38 ~~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 38 KDIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred hHHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 5799999999985 45555555555555554444444444444 44455 88876 999887
No 404
>PRK06683 hypothetical protein; Provisional
Probab=56.76 E-value=46 Score=22.92 Aligned_cols=49 Identities=10% Similarity=-0.011 Sum_probs=34.5
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~ 106 (306)
+...+.|+. .+.++|++-... ++...+.+.++|+.++++++.-++...+
T Consensus 17 ~~v~kaik~--gkaklViiA~Da--------~~~~~~~i~~~~~~~~Vpv~~~~t~~eL 65 (82)
T PRK06683 17 KRTLEAIKN--GIVKEVVIAEDA--------DMRLTHVIIRTALQHNIPITKVESVRKL 65 (82)
T ss_pred HHHHHHHHc--CCeeEEEEECCC--------CHHHHHHHHHHHHhcCCCEEEECCHHHH
Confidence 445566664 467888876553 3445899999999999999876655433
No 405
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=55.81 E-value=23 Score=28.33 Aligned_cols=51 Identities=18% Similarity=0.255 Sum_probs=25.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCC----hhHHHHHHHHHHHcCCEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP----DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~----~~~l~~i~~l~~~~gi~li 98 (306)
++.+++.+.+. .++.+|++.+.....+.-..+ ..+++.+.++|+++|+.++
T Consensus 129 ~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi 183 (193)
T PF13481_consen 129 LEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVI 183 (193)
T ss_dssp HHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEE
T ss_pred HHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34555555542 247788888765543321111 2467778888888887665
No 406
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=54.91 E-value=31 Score=27.35 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=28.7
Q ss_pred HHHHHHH---hcCCcEEEEEEccccCCCCcc--cC----ChhHHHHHHHHHHHcCCEEE
Q 021893 49 ALEKIFK---ESGDQIAGFLFEPIQGEAGVI--IP----PDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 49 ~le~~i~---~~~~~~~~v~v~~~~~~~G~~--~~----~~~~l~~i~~l~~~~gi~li 98 (306)
.++++++ +..++++++++.|+....... .. ..++-+.+.++|+++++.+|
T Consensus 94 ~l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 94 DYETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 4445554 333566777777653221110 11 13456678899999998876
No 407
>PRK11633 cell division protein DedD; Provisional
Probab=54.62 E-value=88 Score=26.27 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=39.7
Q ss_pred ChhhHHHHHHHHHHCCceecc-----CCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 227 LPVSAYDICLKMKERGILAKP-----THDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 227 ~~~~~~~~~~~l~~~Gi~~~~-----~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
...++..+...|+..|+-... ..+.+.|+..+-+.++++++.++.+|++..
T Consensus 159 n~~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~~ 214 (226)
T PRK11633 159 NADKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQLS 214 (226)
T ss_pred CHHHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 356788999999999976543 234577777778899999999999998753
No 408
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=53.60 E-value=41 Score=29.64 Aligned_cols=54 Identities=9% Similarity=0.058 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.+.|.+.+++.-.+-.+|++....++ | + +.++..++.++|++.|+.+++|..-.
T Consensus 116 ~~~~l~~~~~~l~~~d~VvlsGSlP~-g-~--~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 116 LEQFLEQLKALLESDDIVVLSGSLPP-G-V--PPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred HHHHHHHHHHhcccCCEEEEeCCCCC-C-C--CHHHHHHHHHHHHhcCCeEEEECChH
Confidence 44444444442123334555544333 2 2 68899999999999999999996543
No 409
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=50.61 E-value=65 Score=23.03 Aligned_cols=42 Identities=10% Similarity=0.003 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.+..+.|+. .+.++|++.... ++...+.+..+|.+++++++.
T Consensus 22 ~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 22 KRTIKAIKL--GKAKLVIVASNC--------PKDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 445666664 467777776542 345589999999999999865
No 410
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=49.27 E-value=80 Score=25.02 Aligned_cols=92 Identities=15% Similarity=0.043 Sum_probs=51.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChh
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
.+||++-|+-+=...+.-+.+. .-+++.....-.+-..|.---+.|.+++++-. -+...+++-...-++|.+
T Consensus 84 KRvIiiGGGAqVsqVA~GAIsE--ADRHNiRGERISvDTiPlVGEE~laEAVkAV~rLpRv~iLVLAGslMGGkI----- 156 (218)
T COG1707 84 KRVIIIGGGAQVSQVARGAISE--ADRHNIRGERISVDTIPLVGEEELAEAVKAVARLPRVGILVLAGSLMGGKI----- 156 (218)
T ss_pred cEEEEECCchhHHHHHHhhcch--hhhcccccceeeeecccccChHHHHHHHHHHhccccceeEEEecccccchH-----
Confidence 5677777765544444334443 12333322222234444444566666666422 124455666666677765
Q ss_pred HHHHHHHHHHHcCCEEEEehh
Q 021893 82 YLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~ 102 (306)
-+++.++.++||+.+|+=..
T Consensus 157 -teaVk~lr~~hgI~VISL~M 176 (218)
T COG1707 157 -TEAVKELREEHGIPVISLNM 176 (218)
T ss_pred -HHHHHHHHHhcCCeEEEecc
Confidence 67888888999999996544
No 411
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=46.91 E-value=1.1e+02 Score=23.14 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=18.0
Q ss_pred ChhHHHHHHHHHHHcCCEEE
Q 021893 79 PDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li 98 (306)
..++|.++.+.|++.||-++
T Consensus 42 ~~Dllge~v~a~h~~Girv~ 61 (132)
T PF14871_consen 42 KRDLLGEQVEACHERGIRVP 61 (132)
T ss_pred CcCHHHHHHHHHHHCCCEEE
Confidence 36889999999999999887
No 412
>PF07972 Flavodoxin_NdrI: NrdI Flavodoxin like ; InterPro: IPR004465 Ribonucleotide reductases (RNRs) are enzymes that provide the precursors of DNA synthesis. The three characterised classes of RNRs differ by their metal cofactor and their stable organic radical. Class Ib RNR is encoded in four different genes: nrdH, nrdI, nrdE and nrdF []. The exact function of NrdI within the ribonucleotide reductases has not yet been fully characterised.; PDB: 1RLJ_A 3N39_C 3N3B_D 3N3A_C 2XOE_A 2XOD_A 2X2P_A 2X2O_A.
Probab=43.80 E-value=38 Score=25.37 Aligned_cols=48 Identities=10% Similarity=0.241 Sum_probs=35.5
Q ss_pred HHHHHHHHH--hcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFK--ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~--~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++.+++.|+ +|....+.|+.+.+-|-+ ..|-.+-..++++++++++.+
T Consensus 58 p~~v~~FL~~~~N~~~l~GVigSGNrNfg------~~f~~aa~~ia~ky~VPll~k 107 (122)
T PF07972_consen 58 PKQVIRFLENPDNRKLLRGVIGSGNRNFG------DNFCLAADKIAEKYGVPLLYK 107 (122)
T ss_dssp -HHHHHHHHSHHHGGGEEEEEEEE-GGGG------GGTTHHHHHHHHHHT--EEEE
T ss_pred CHHHHHHHHHHHHHhhheeEEecCCcHHH------HHHHHHHHHHHHHcCCCEEEE
Confidence 889999999 777889999988765543 334678888999999999976
No 413
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=41.49 E-value=25 Score=30.30 Aligned_cols=26 Identities=23% Similarity=0.220 Sum_probs=23.6
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.+.++++++.|+++|+-||+|-+.-
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhhhccccccceEEEeeecc
Confidence 46779999999999999999999885
No 414
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=41.26 E-value=78 Score=26.93 Aligned_cols=51 Identities=12% Similarity=0.217 Sum_probs=32.8
Q ss_pred CHHHHHHHHHhc--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCC-EEEEehhhh
Q 021893 46 DITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-LMIADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~--~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi-~li~De~~~ 104 (306)
|++.+++.++.. ..+..+|.+ |. ..+.+.++.+.+.+++++. .+++|-+..
T Consensus 57 ~~~~~~~q~~~~~~~~~~~ai~i-------G~-l~~~~~~~~i~~~~~~~~~~~vv~DPv~~ 110 (266)
T PRK06427 57 PPEFVAAQLDAVFSDIRIDAVKI-------GM-LASAEIIETVAEALKRYPIPPVVLDPVMI 110 (266)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEE-------CC-cCCHHHHHHHHHHHHhCCCCCEEEcCccc
Confidence 555555555531 123445544 43 3467889999999999886 789996643
No 415
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=41.09 E-value=1.1e+02 Score=24.66 Aligned_cols=45 Identities=24% Similarity=0.586 Sum_probs=31.7
Q ss_pred HHHhcCCcEEEEEEccccCCCCcccCChhH---HHHHHHHHHHcCCEEEEehhhh
Q 021893 53 IFKESGDQIAGFLFEPIQGEAGVIIPPDGY---LKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 53 ~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~---l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|.+.+-++.+.+.||+ |.|..|+ ++++.++|++.++.+|+++ |.
T Consensus 17 ~L~~~g~~vt~~fyNPN------IhP~~Ey~~R~~~~~~~~~~~~i~~i~~~-Y~ 64 (176)
T PF02677_consen 17 RLREEGFDVTGYFYNPN------IHPYEEYERRLEELKRFAEKLGIPLIEGD-YD 64 (176)
T ss_pred HHHHCCCCeEEEEeCCC------CCcHHHHHHHHHHHHHHHHHcCCCEEecC-CC
Confidence 34444457888888887 4445555 4566777899999999998 64
No 416
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=41.05 E-value=26 Score=24.18 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.=++|+++++++|++++.|....
T Consensus 27 ~~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 27 EVAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 346899999999999999998876
No 417
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=40.75 E-value=74 Score=23.01 Aligned_cols=44 Identities=18% Similarity=0.319 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.+.+++.|+. .+.++|++-..- ++..-+++.+.|+.++++++.-
T Consensus 22 ~~~v~~aik~--gk~~lVI~A~D~--------s~~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKK--KKVYLIIISNDI--------SENSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHc--CCceEEEEeCCC--------CHhHHHHHHHHHHHcCCCEEEe
Confidence 3566777775 457777775554 3444899999999999988643
No 418
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=40.34 E-value=85 Score=30.17 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=41.2
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc--------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV--------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~--------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.... =.+.+|.++|++..... ...+.+.++++++.||++|+-||.|-+.-
T Consensus 24 G~~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~N 98 (543)
T TIGR02403 24 GDLRGIIEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFN 98 (543)
T ss_pred cCHHHHHHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 45666666555321 23678888887554211 12356789999999999999999998874
No 419
>PRK10785 maltodextrin glucosidase; Provisional
Probab=39.84 E-value=86 Score=30.57 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc-c------------cCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV-I------------IPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~-~------------~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|++.+.+.|.-.. =-+.+|.++|++...+. . ..+.+.++++++.||+.|+-||.|-+.-
T Consensus 176 GDl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 176 GDLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47888887776421 24788899997654321 1 2345779999999999999999999974
No 420
>PF05036 SPOR: Sporulation related domain; InterPro: IPR007730 This 70 residue domain is composed of two 35 residue repeats that are found in bacterial proteins involved in sporulation and cell division, such as FtsN, CwlM and RlpA. This repeat might be involved in binding peptidoglycan. FtsN is an essential cell division protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. The repeats lie at the periplasmic C terminus, which has an RNP-like fold []. FtsN localises to the septum ring complex. The CwlM protein is a cell wall hydrolase, where the C-terminal region, including the repeats, determines substrate specificity []. RlpA is a rare lipoprotein A protein that may be important for cell division. Its N-terminal cysteine may be attached to thioglyceride and N-fatty acyl residues [].; PDB: 1X60_A 1UTA_A.
Probab=39.77 E-value=57 Score=21.22 Aligned_cols=47 Identities=19% Similarity=0.119 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHHCCcee----ccCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 228 PVSAYDICLKMKERGILA----KPTHDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~----~~~~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
...+..+...|...|.-. ...+..+.|+....+.++++.+.++..|+
T Consensus 15 ~~~A~~~~~~l~~~g~~~~~~~~~~~~~~yrV~~G~f~~~~~A~~~~~~l~ 65 (76)
T PF05036_consen 15 EENAERLLAKLKKKGPDAYVVQVSKGGPWYRVRVGPFSSREEAEAALRKLK 65 (76)
T ss_dssp HHHHHHHHHHHHHHT-----EEEEEETTCEEEEECCECTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEecCCceEEEEECCCCCHHHHHHHHHHHh
Confidence 456778899998888642 23346677777767788889999999887
No 421
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=39.17 E-value=1.2e+02 Score=20.95 Aligned_cols=51 Identities=16% Similarity=0.117 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 107 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~ 107 (306)
..+.-++|+. .+...+++--.- ++..+..|..+|.++++.++.-+....+|
T Consensus 18 ~kqt~Kai~k--g~~~~v~iA~Da--------~~~vv~~l~~lceek~Ip~v~V~s~~~LG 68 (84)
T PRK13600 18 LKETLKALKK--DQVTSLIIAEDV--------EVYLMTRVLSQINQKNIPVSFFKSKHALG 68 (84)
T ss_pred HHHHHHHHhc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 3445556653 456666663332 34458899999999999999888776443
No 422
>PRK07714 hypothetical protein; Provisional
Probab=39.06 E-value=1.2e+02 Score=21.55 Aligned_cols=44 Identities=18% Similarity=0.163 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.+.+++.++. .+.++|++-..- ++...+.+..+|..++++++.-
T Consensus 23 ~~~v~~al~~--g~~~lViiA~D~--------s~~~~~ki~~~~~~~~vp~~~~ 66 (100)
T PRK07714 23 EELVLKEVRS--GKAKLVLLSEDA--------SVNTTKKITDKCTYYNVPMRKV 66 (100)
T ss_pred HHHHHHHHHh--CCceEEEEeCCC--------CHHHHHHHHHHHHhcCCCEEEe
Confidence 3566677775 456777775543 3344889999999999998743
No 423
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=38.97 E-value=1.3e+02 Score=24.70 Aligned_cols=48 Identities=15% Similarity=0.269 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.|.--.+.+-.+-++.+|+||-.+..+ .... .+++.+++++||+.+|.
T Consensus 143 TEasVdLarlAGl~Pa~VicEi~~~dG-~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 143 TEAAVDLARLAGLKPAGVICEIMNDDG-TMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCCc-cccC----hHHHHHHHHHcCCcEEE
Confidence 333333444344567999999887744 3444 88999999999999983
No 424
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=38.83 E-value=80 Score=27.07 Aligned_cols=36 Identities=6% Similarity=-0.035 Sum_probs=24.8
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+++-|-...+|......+.++++.++|+++++.+|+
T Consensus 42 lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 42 LVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred EEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 444444444443334567899999999999998874
No 425
>PF05209 MinC_N: Septum formation inhibitor MinC, N-terminal domain; InterPro: IPR007874 In Escherichia coli FtsZ (P0A9A6 from SWISSPROT) assembles into a Z ring at midcell. Its assembly at polar sites is prevented by the min system. MinC P18196 from SWISSPROT, a component of this system, is an inhibitor of FtsZ assembly that is positioned within the cell by interaction with the MinDE proteins. MinC is an oligomer, probably a dimer []. The C-terminal half of MinC is the most conserved and interacts with MinD. The N-terminal half is thought to interact with FtsZ. MinC rapidly oscillates between the poles of the cell to destabilise FtsZ filaments that have formed before they mature into polar Z rings; GO: 0051302 regulation of cell division; PDB: 3GHF_A 1HF2_C.
Probab=38.40 E-value=50 Score=23.49 Aligned_cols=51 Identities=16% Similarity=0.221 Sum_probs=31.2
Q ss_pred ccccCCCHHHHHHHHHhc----C----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 40 LKVDFGDITALEKIFKES----G----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~----~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
......|++.+.+.|.+. + ..+.++=++.. .++..+.++.++|+++|+.+|
T Consensus 18 l~l~~~d~~~l~~~L~~ki~~ap~FF~~~pvvldl~~l--------~~~~dl~~L~~~l~~~gl~~v 76 (99)
T PF05209_consen 18 LRLRSADLDELLQALDEKIAQAPDFFKNAPVVLDLSNL--------PDELDLAALVELLRRHGLRPV 76 (99)
T ss_dssp EEECSS-HHHHHHHHHHHHHHTHHHCTTTEEEEEEEEE--------ETTHHHHHHHHHHHCCCHCCC
T ss_pred EEeCCCCHHHHHHHHHHHHHhChHhHcCCCeEEehhhc--------CChhhHHHHHHHHHHcCCEEE
Confidence 334455777777777752 1 22333334444 234459999999999998776
No 426
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=37.89 E-value=1.1e+02 Score=23.66 Aligned_cols=57 Identities=23% Similarity=0.250 Sum_probs=35.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH-HHcCCEEE-Eehhhh
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC-SKYNILMI-ADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~-~~~gi~li-~De~~~ 104 (306)
+++.+.++++++ ++..|+|=-+.++.|...+..+..++..+.. +++++.++ +||=.+
T Consensus 41 ~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 41 DFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 789999999986 5555555555556555544444444444443 45667665 777554
No 427
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=37.86 E-value=1.4e+02 Score=21.77 Aligned_cols=43 Identities=5% Similarity=-0.113 Sum_probs=30.8
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++..+.|+. .+.++|++-... ++...+.+...|+.++++++..
T Consensus 31 ~~vlkalk~--gkaklViiA~D~--------~~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 31 KSTLKALRN--GKAKLVIISNNC--------PPIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHc--CCeeEEEEeCCC--------CHHHHHHHHHHHhhcCCCEEEe
Confidence 445566664 467888876654 3444899999999999999853
No 428
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=37.73 E-value=81 Score=26.29 Aligned_cols=16 Identities=19% Similarity=0.127 Sum_probs=7.3
Q ss_pred ccccCCCHHHHHHHHH
Q 021893 40 LKVDFGDITALEKIFK 55 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~ 55 (306)
..-|...++.++..+.
T Consensus 112 alnP~Tp~~~i~~~l~ 127 (220)
T PRK08883 112 VLNPATPLHHLEYIMD 127 (220)
T ss_pred EeCCCCCHHHHHHHHH
Confidence 3344444455554444
No 429
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=37.72 E-value=75 Score=24.76 Aligned_cols=19 Identities=16% Similarity=0.391 Sum_probs=15.0
Q ss_pred hhHHHHHHHHHHHcCCEEE
Q 021893 80 DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li 98 (306)
.++-+.+.++|.++++.+|
T Consensus 116 ~~~n~~l~~~a~~~~~~~i 134 (174)
T cd01841 116 QRLNDAIKELAPELGVTFI 134 (174)
T ss_pred HHHHHHHHHHHHHCCCEEE
Confidence 5567788899999997665
No 430
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=37.71 E-value=82 Score=21.96 Aligned_cols=48 Identities=17% Similarity=0.195 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH-HHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA-VRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~-i~~l~~~~gi~li~De~~~ 104 (306)
..++.+.++. .+..++++...-++ ..+.. +..+|.+++++++.=....
T Consensus 20 ~~~v~k~l~~--~~~~lvilA~d~~~--------~~~~~~l~~~c~~~~Ip~~~~~s~~ 68 (95)
T PF01248_consen 20 IKEVLKALKK--GKAKLVILAEDCSP--------DSIKKHLPALCEEKNIPYVFVPSKE 68 (95)
T ss_dssp HHHHHHHHHT--TCESEEEEETTSSS--------GHHHHHHHHHHHHTTEEEEEESHHH
T ss_pred hHHHHHHHHc--CCCcEEEEcCCCCh--------hhhcccchhheeccceeEEEECCHH
Confidence 4566667775 36667776655432 22555 8899999999998766543
No 431
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=37.29 E-value=70 Score=29.33 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=32.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEeh
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De 101 (306)
+.+.|-+.+++.=.+..+++++... -|.+.+ .+.+.++|++.|+++++|-
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVLSDY~--KG~L~~----~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVLSDYA--KGVLTN----VQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEEeccc--cccchh----HHHHHHHHHHcCCcEEECC
Confidence 3444444444322345566665432 244555 8999999999999999994
No 432
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=36.88 E-value=77 Score=24.62 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=21.0
Q ss_pred cEEEEEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 60 QIAGFLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 60 ~~~~v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
.++++++.+..++ .+. .....+-+.+.++|+++++.++
T Consensus 101 ~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 101 GAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred CCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEe
Confidence 4556666543222 221 1234556777788888887655
No 433
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=36.63 E-value=1.3e+02 Score=22.30 Aligned_cols=47 Identities=17% Similarity=0.209 Sum_probs=31.0
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+.+.+++.+++-. ..++++.+....... -. -+++.+.|++++++|+.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~~~--~i-----P~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRYLD--EI-----PEEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCccc--cC-----CHHHHHHHHHcCCCEEE
Confidence 5666777777522 357777775542222 12 47889999999999983
No 434
>cd01171 YXKO-related B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Probab=36.60 E-value=89 Score=26.37 Aligned_cols=58 Identities=10% Similarity=0.123 Sum_probs=34.2
Q ss_pred CCCCCcccccCCC--HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 34 PLLPGHLKVDFGD--ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 34 ~~~~~~~~~~~~d--~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
+..|.....+..+ .+++...+. +..++++-+- .++.+..+++.+.++++++.+|+|..
T Consensus 53 ~~~pe~i~~~~~~~~~~~~~~~~~----~~d~v~ig~g-------l~~~~~~~~i~~~~~~~~~pvVlDa~ 112 (254)
T cd01171 53 SYSPELMVHPLLETDIEELLELLE----RADAVVIGPG-------LGRDEEAAEILEKALAKDKPLVLDAD 112 (254)
T ss_pred hcCceeeEecccccchHHHHhhhc----cCCEEEEecC-------CCCCHHHHHHHHHHHhcCCCEEEEcH
Confidence 4445555555432 223333332 4456666332 12336689999999999999999943
No 435
>PRK07283 hypothetical protein; Provisional
Probab=36.16 E-value=78 Score=22.54 Aligned_cols=46 Identities=13% Similarity=0.019 Sum_probs=32.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
.+.+++.|+. .+.++|++-..- +++.-+.+.+.|+.|+++++...+
T Consensus 23 ~~~v~~aik~--gk~~lVi~A~Da--------s~~~~kk~~~~~~~~~Vp~~~~~t 68 (98)
T PRK07283 23 EELVVKAIQS--GQAKLVFLANDA--------GPNLTKKVTDKSNYYQVEVSTVFS 68 (98)
T ss_pred HHHHHHHHHc--CCccEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEeCC
Confidence 3566777775 456777775554 344478899999999999875443
No 436
>PRK10927 essential cell division protein FtsN; Provisional
Probab=35.52 E-value=2.2e+02 Score=25.22 Aligned_cols=49 Identities=12% Similarity=0.018 Sum_probs=38.6
Q ss_pred hhhHHHHHHHHHHCCceecc-CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 228 PVSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~~-~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
..+++.+...|...|+-... .+++|.|+.++-+.++++++.+.++|+.+
T Consensus 258 ~~nAE~LrAkLa~~G~~A~I~~~g~~~RVrVGPf~sr~eAe~a~~rLk~a 307 (319)
T PRK10927 258 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMA 307 (319)
T ss_pred HHHHHHHHHHHHHcCCeeEEccCCcEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 56788999999999965442 23468888888889999999999988753
No 437
>PLN03244 alpha-amylase; Provisional
Probab=35.34 E-value=57 Score=32.73 Aligned_cols=32 Identities=19% Similarity=0.144 Sum_probs=27.2
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhhcccc
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~ 108 (306)
..+++.++++++.||+.||-||.|-++..++.
T Consensus 437 YGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~ 468 (872)
T PLN03244 437 YGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 468 (872)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecCccCCC
Confidence 34678899999999999999999999975543
No 438
>PRK05339 PEP synthetase regulatory protein; Provisional
Probab=35.18 E-value=91 Score=26.94 Aligned_cols=84 Identities=11% Similarity=0.157 Sum_probs=47.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
....|++-....|.|...++-+- ...|.........+|+ ++.+.+++.+++......+|+.+ .-++
T Consensus 3 ~~~~i~~VSDstGeTAe~v~~A~----l~QF~~~~~~~~~~p~v~~~~~~~~i~~~~~~~~~iV~~T---------lv~~ 69 (269)
T PRK05339 3 MKRHVFLVSDSTGETAETVGRAA----LSQFPNVEFEEHRYPFVRTEEKADEVLEEINAERPIVFYT---------LVDP 69 (269)
T ss_pred CceEEEEEeCCHHHHHHHHHHHH----HHhCCCCCeeEEEeCCcCCHHHHHHHHHHHHhcCCEEEEe---------CCCH
Confidence 34445555555576655443332 2233211122244454 57888888888753333333332 2256
Q ss_pred hHHHHHHHHHHHcCCEEE
Q 021893 81 GYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li 98 (306)
+..+.+.+.|+++|+..+
T Consensus 70 elr~~l~~~~~~~~i~~v 87 (269)
T PRK05339 70 ELREILEERCAEFGIPCI 87 (269)
T ss_pred HHHHHHHHHHHHcCCCEE
Confidence 778888899999998775
No 439
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=34.60 E-value=95 Score=25.84 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhcC--CcEEEEEEccccCCCCcc-cCC-----hhHHHHHHHHHHHcCCEEEE
Q 021893 46 DITALEKIFKESG--DQIAGFLFEPIQGEAGVI-IPP-----DGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 46 d~~~le~~i~~~~--~~~~~v~v~~~~~~~G~~-~~~-----~~~l~~i~~l~~~~gi~li~ 99 (306)
+++.+++.++... .++.+|++.+.+...... ..+ .+++++|.++|+++|+.+++
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 5777776666421 267888888876432111 111 14578888899999988875
No 440
>PRK11468 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=34.29 E-value=1.7e+02 Score=26.33 Aligned_cols=59 Identities=10% Similarity=0.126 Sum_probs=41.3
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----CEEEEehhhh
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----ILMIADEIQS 104 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----i~li~De~~~ 104 (306)
-+|.-|+++++.+.+++-.....++++ +-|.+|++.. ..-..+++++.| ++++-|++-.
T Consensus 76 ~VFaSPs~~qI~~ai~av~~~~GvLli--vkNYtGDvlN----F~mAaE~a~~eGi~v~~V~V~DDva~ 138 (356)
T PRK11468 76 EIFTSPTPDQMFECAMQVDGGEGVLLI--IKNYTGDVLN----FETATELLHDSGVKVTTVLIDDDVAV 138 (356)
T ss_pred cccCCCCHHHHHHHHHhhcCCCCEEEE--ecccHHhhcc----HHHHHHHHHhCCCcEEEEEeCCcccC
Confidence 445567889998888874333444444 4455788988 888888888766 5667787765
No 441
>PRK14481 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=34.02 E-value=1.8e+02 Score=25.98 Aligned_cols=59 Identities=8% Similarity=0.156 Sum_probs=41.5
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----CEEEEehhhh
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----ILMIADEIQS 104 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----i~li~De~~~ 104 (306)
-+|.-|+++++-+.++.-.....++++ +-|.+|++.. ..-..+.++..| ++++-|++..
T Consensus 76 ~VFaSPs~~~Il~ai~av~~~~GvL~i--v~NYtGD~ln----F~lA~E~a~~eGi~v~~V~v~DDva~ 138 (331)
T PRK14481 76 AVFTSPTPDQILEAIKAVDTGAGVLLI--VKNYSGDVMN----FEMAAELAEMEGIEVASVVVDDDVAV 138 (331)
T ss_pred cccCCCCHHHHHHHHHhccCCCCEEEE--eCCcHHHhcc----HHHHHHHHHhCCCCEEEEEeCCcccC
Confidence 445567889998899875444444444 4455788888 888888888766 5677888775
No 442
>COG1533 SplB DNA repair photolyase [DNA replication, recombination, and repair]
Probab=33.56 E-value=1.4e+02 Score=26.20 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=49.4
Q ss_pred EecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 021893 8 CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 87 (306)
Q Consensus 8 ~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~ 87 (306)
+.|+-||..++-..-..... +..+..+.+.-|=++.|++-+.+.+++...|.+..+.-+..-.--.....+++.
T Consensus 36 y~GC~h~C~YCYa~~~~~~~------~~~~~~v~vk~n~~e~l~~el~~~~~k~~~i~is~~TDpyqp~E~~~~ltR~il 109 (297)
T COG1533 36 YRGCSHGCIYCYARPMHGYL------PKSPTKVNVKENLLELLERELRKPGPKRTVIAISSVTDPYQPIEKEYRLTRKIL 109 (297)
T ss_pred cCCCCCCCceeecccccccc------cCCCceeeechhHHHHHHHHHhhccCCceEEEEecCCCCCCcchHHHHHHHHHH
Confidence 45777887777554444211 111234566666688888888754456666666655444322111334467788
Q ss_pred HHHHHcCCEEE
Q 021893 88 DLCSKYNILMI 98 (306)
Q Consensus 88 ~l~~~~gi~li 98 (306)
++..++|..+.
T Consensus 110 ei~~~~~~~v~ 120 (297)
T COG1533 110 EILLKYGFPVS 120 (297)
T ss_pred HHHHHcCCcEE
Confidence 88888877554
No 443
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=33.40 E-value=1.4e+02 Score=23.15 Aligned_cols=36 Identities=8% Similarity=-0.141 Sum_probs=23.2
Q ss_pred cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC
Q 021893 57 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN 94 (306)
Q Consensus 57 ~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g 94 (306)
..+++.++++.++...... ...++.+.+.+++++++
T Consensus 93 ~~p~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 128 (169)
T cd01831 93 RYPDAPIVLMLGPMLFGPY--GTEEEIKRVAEAFKDQK 128 (169)
T ss_pred HCCCCeEEEEecCcccccc--ccHHHHHHHHHHHHhcC
Confidence 3356667777665544322 12577889999998876
No 444
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=33.37 E-value=1.1e+02 Score=23.58 Aligned_cols=40 Identities=5% Similarity=-0.026 Sum_probs=24.0
Q ss_pred CcEEEEEEccccCC-CCc--ccCChhHHHHHHHHHHHcCCEEE
Q 021893 59 DQIAGFLFEPIQGE-AGV--IIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 59 ~~~~~v~v~~~~~~-~G~--~~~~~~~l~~i~~l~~~~gi~li 98 (306)
+.+.++++.++... ... ...-.++-+.+.++|+++++.+|
T Consensus 86 ~~~~vi~~~~~p~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 128 (169)
T cd01828 86 PNIKIVVQSILPVGELKSIPNEQIEELNRQLAQLAQQEGVTFL 128 (169)
T ss_pred CCCeEEEEecCCcCccCcCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 45667776664432 111 11124566778889999998776
No 445
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=32.90 E-value=1e+02 Score=25.45 Aligned_cols=53 Identities=17% Similarity=0.103 Sum_probs=35.5
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
++..+++|.+.|+++++. --+++++.+..+ ....+..+.+.+.|++.|+-.++
T Consensus 47 vv~~d~~~~~~l~~al~g---~d~v~~~~~~~~-----~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 47 VVEADYDDPESLVAALKG---VDAVFSVTPPSH-----PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEES-TT-HHHHHHHHTT---CSEEEEESSCSC-----CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred EeecccCCHHHHHHHHcC---CceEEeecCcch-----hhhhhhhhhHHHhhhccccceEE
Confidence 467778899999999993 344566655543 22345588899999999976664
No 446
>cd07576 R-amidase_like Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric compl
Probab=32.89 E-value=89 Score=26.20 Aligned_cols=21 Identities=19% Similarity=0.366 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHHHcCCEEEEe
Q 021893 80 DGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~D 100 (306)
.++++.+.++++++++.+++=
T Consensus 61 ~~~~~~l~~~a~~~~~~ii~G 81 (254)
T cd07576 61 GPALQALRAIARRHGIAIVVG 81 (254)
T ss_pred ChHHHHHHHHHHHcCCEEEEe
Confidence 467999999999999988854
No 447
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=32.82 E-value=1.2e+02 Score=22.88 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH-HHHHHHHcCCEEE-Eehhhh
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA-VRDLCSKYNILMI-ADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~-i~~l~~~~gi~li-~De~~~ 104 (306)
.+++.|++.++++ ++..|++=-+.++.|...+.....++ ..++.+++++.+. +||-++
T Consensus 35 ~~~~~l~~~i~~~--~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 35 PDWSRIEELLKEW--TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHHc--CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3588899999986 34445554444555544222222222 2223344576655 898876
No 448
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=32.81 E-value=1.2e+02 Score=22.57 Aligned_cols=47 Identities=9% Similarity=0.225 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHH---HHHHHHHHHcCCEEE
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL---KAVRDLCSKYNILMI 98 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l---~~i~~l~~~~gi~li 98 (306)
+-++.++..+ ...+++-++++ +|...|+++-+ ++|.+.|+..|+-|+
T Consensus 55 ~I~~~al~~~---A~~vIl~HNHP-sG~~~PS~~D~~~T~~L~~~~~~l~I~ll 104 (123)
T PF04002_consen 55 EIFRRALRLN---ASSVILAHNHP-SGDPEPSDADIALTRRLKKAARLLGIELL 104 (123)
T ss_dssp HHHHHHHHTT----SEEEEEEE-T-TS--S--HHHHHHHHHHHHHHHHHT-EEE
T ss_pred HHHHHHHhhC---CceEEEEEEcC-CCCCCCCHhHHHHHHHHHHHHHHcCCeee
Confidence 4567777753 44445544444 45677788777 888889998888764
No 449
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.44 E-value=1.1e+02 Score=24.09 Aligned_cols=50 Identities=22% Similarity=0.300 Sum_probs=27.7
Q ss_pred HHHHHHHh---cCCcEEEEEEccccCCCCcc---------cCChhHHHHHHHHHHHcCCEEE
Q 021893 49 ALEKIFKE---SGDQIAGFLFEPIQGEAGVI---------IPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 49 ~le~~i~~---~~~~~~~v~v~~~~~~~G~~---------~~~~~~l~~i~~l~~~~gi~li 98 (306)
.++++++. ..+.+.++++.|+....... ..-.++-+.+.++|+++++.+|
T Consensus 90 ~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 90 NLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 44444443 23456777777754332211 1122344567778999997777
No 450
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=32.32 E-value=1.4e+02 Score=21.99 Aligned_cols=49 Identities=8% Similarity=0.061 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..++.+.|+. .+..+|++-..-++ .+..+.+..+|++++++++.-....
T Consensus 31 ~~~v~kaikk--gka~LVilA~D~s~-------~~~~~~i~~lc~~~~Ip~~~~~sk~ 79 (117)
T TIGR03677 31 TNEVTKAVER--GIAKLVVIAEDVEP-------PEIVAHLPALCEEKGIPYVYVKKKE 79 (117)
T ss_pred HHHHHHHHHc--CCccEEEEeCCCCc-------HHHHHHHHHHHHHcCCCEEEeCCHH
Confidence 3455666664 45777777655322 2347899999999999988665543
No 451
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=32.24 E-value=1.2e+02 Score=19.56 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHCCceec--cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 230 SAYDICLKMKERGILAK--PTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 230 ~~~~~~~~l~~~Gi~~~--~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
....+.+.|.+.|+-+. ..+..-++++ +..++++.+.++.+|-+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is--~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQ--FVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEE--EEEEHHHHHHHHHHHHHHH
Confidence 45678888889888773 2233346666 6678899999999987665
No 452
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=32.15 E-value=2.3e+02 Score=23.32 Aligned_cols=48 Identities=19% Similarity=0.255 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.|.--.+.+--+-...+++||-.+. .|.... .+++.+++++|++.++.
T Consensus 144 TEaavdL~~lAGl~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 144 TEASVDLAELAGLKPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred HHHHHHHHHHcCCCceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 4444444443333468888888765 555555 89999999999999973
No 453
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=32.14 E-value=48 Score=29.36 Aligned_cols=58 Identities=12% Similarity=0.284 Sum_probs=39.7
Q ss_pred CHHHHHHHHHhc--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 46 DITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~--~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.+.+++.+++. .++.++|++ -+++|+|....+...-++|.++..++-++++++....
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA 140 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA 140 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec
Confidence 455556555542 133444443 2677889898888888999998888878888887664
No 454
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=32.04 E-value=1.8e+02 Score=24.50 Aligned_cols=62 Identities=24% Similarity=0.239 Sum_probs=34.1
Q ss_pred CCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHH---HHHcC--CEEEEeh
Q 021893 36 LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL---CSKYN--ILMIADE 101 (306)
Q Consensus 36 ~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l---~~~~g--i~li~De 101 (306)
-.|...-|...++.++..+..- +.+-++.++|.+. |.. .-++.+++|.++ .++++ ..+-+|.
T Consensus 120 kaGlalnP~Tp~~~i~~~l~~v-D~VLiMtV~PGfg--GQ~-f~~~~l~KI~~lr~~~~~~~~~~~IeVDG 186 (228)
T PRK08091 120 LIGLCLCPETPISLLEPYLDQI-DLIQILTLDPRTG--TKA-PSDLILDRVIQVENRLGNRRVEKLISIDG 186 (228)
T ss_pred eEEEEECCCCCHHHHHHHHhhc-CEEEEEEECCCCC--Ccc-ccHHHHHHHHHHHHHHHhcCCCceEEEEC
Confidence 3456777777888888888742 3333333444332 333 344445555544 44544 5566773
No 455
>TIGR02363 dhaK1 dihydroxyacetone kinase, DhaK subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the DhaK subunit of the latter type of dihydroxyacetone kinase, but it specifically excludes the DhaK paralog DhaK2 (TIGR02362) found in the same operon as DhaK and DhaK in the Firmicutes.
Probab=31.61 E-value=2e+02 Score=25.68 Aligned_cols=59 Identities=10% Similarity=0.172 Sum_probs=40.6
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----CEEEEehhhh
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----ILMIADEIQS 104 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----i~li~De~~~ 104 (306)
-+|.-|+++++-+.++.-.....++++ +-|.+|++.. ..-..+.+++.| ++++-|++-.
T Consensus 77 ~VFaSPs~~~I~~ai~av~~~~GvL~i--v~NYtGD~ln----F~mA~E~a~~eGi~v~~V~V~DDva~ 139 (329)
T TIGR02363 77 EVFTSPTPDQILEAIKAVDQGAGVLLI--VKNYTGDVMN----FEMAAELAEDEGIKVATVVVDDDIAV 139 (329)
T ss_pred cccCCCCHHHHHHHHHhccCCCCEEEE--eCCcHHHhcc----HHHHHHHHHHcCCcEEEEEECCcccC
Confidence 445567888888888864333444444 3455788888 888888888766 5667787764
No 456
>PRK04175 rpl7ae 50S ribosomal protein L7Ae; Validated
Probab=31.61 E-value=1.4e+02 Score=22.21 Aligned_cols=49 Identities=10% Similarity=0.091 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.+++.+.|+. .+..++++-..-+ +.+..+.+..+|++++++++.-....
T Consensus 35 ~~~v~kaikk--gkakLVilA~D~s-------~~~i~~~~~~lc~~~~Vp~~~~~tk~ 83 (122)
T PRK04175 35 TNETTKAVER--GIAKLVVIAEDVD-------PEEIVAHLPLLCEEKKIPYVYVPSKK 83 (122)
T ss_pred HHHHHHHHHc--CCccEEEEeCCCC-------hHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 3455556664 4567777755432 22346889999999999988776554
No 457
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=31.60 E-value=88 Score=25.90 Aligned_cols=41 Identities=10% Similarity=0.230 Sum_probs=26.8
Q ss_pred cEEEEEEccccCCCC-cccCC----------hhHHHHHHHHHHHcCCEEEEe
Q 021893 60 QIAGFLFEPIQGEAG-VIIPP----------DGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G-~~~~~----------~~~l~~i~~l~~~~gi~li~D 100 (306)
++++|++.+...... ..... .+++..|..+|+++++.+++=
T Consensus 115 ~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~t 166 (235)
T cd01123 115 RIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVIT 166 (235)
T ss_pred CeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEe
Confidence 789999999865311 01111 244677888899999887743
No 458
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=31.54 E-value=1.5e+02 Score=24.37 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=36.2
Q ss_pred ccccCCCHHHHHHHHHhc-----CCcEEEEEEccccCCCCcc-cCC----------hhHHHHHHHHHHHcCCEEEE
Q 021893 40 LKVDFGDITALEKIFKES-----GDQIAGFLFEPIQGEAGVI-IPP----------DGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~-----~~~~~~v~v~~~~~~~G~~-~~~----------~~~l~~i~~l~~~~gi~li~ 99 (306)
.++...+.+++...+++. ..++++|++.+...-.... ... .+++..|..+|+++++.+++
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 89 YVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred EEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 334445666666665542 2478899999975432110 101 23456688899999988874
No 459
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=31.44 E-value=1.9e+02 Score=24.60 Aligned_cols=52 Identities=17% Similarity=0.081 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
++.|++.|++...+.++|+.-.+..+.+..-.+....+++.++.+++++.++
T Consensus 154 ~~wL~~~L~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~l~~~~~v~~v 205 (277)
T cd07378 154 LAWLEKTLAASTADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKKYKVDAY 205 (277)
T ss_pred HHHHHHHHHhcCCCeEEEEeCccceeCCCCCCcHHHHHHHHHHHHHcCCCEE
Confidence 5678888886544444444433222222222234567888899999987544
No 460
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form with a phosphoprotein donor related to PTS transport proteins. This family represents a protein, unique to the Firmicutes (low GC Gram-positives), that appears to be a divergent second copy of the K subunit of that complex; its gene is always found in operons with the other three proteins of the complex.
Probab=31.28 E-value=1.9e+02 Score=25.79 Aligned_cols=59 Identities=7% Similarity=0.056 Sum_probs=41.4
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----CEEEEehhhh
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----ILMIADEIQS 104 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----i~li~De~~~ 104 (306)
-+|.-|+++++.+.+++-.....++++ +-|.+|++.. ..-..++++..| ++++-|++-.
T Consensus 73 ~VFaSPs~~~I~~ai~av~~~~GvL~i--vkNYtGD~lN----F~mA~E~a~~eGi~v~~V~V~DDvA~ 135 (326)
T TIGR02362 73 DVFVPPTAQDILEAIRQVDRGKGVFVI--IKNFEADLSE----FSQAIQQARQEGRQIKYIIVHDDISV 135 (326)
T ss_pred cccCCCCHHHHHHHHHhhcCCCCEEEE--eccCHHHHhh----HHHHHHHHHHcCCcEEEEEECCcccC
Confidence 445567899999999875334444444 4455788888 888888888766 5667787765
No 461
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.21 E-value=90 Score=19.93 Aligned_cols=46 Identities=11% Similarity=0.027 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 230 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 230 ~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
-...+.+.|.+.++....-+..-++++ +..+.+|.+.++.+|-+.+
T Consensus 16 v~~~~~~~L~~~~i~~i~~~~s~~~is--~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 16 KLGPALEVFGKKPVHLVSQAANDLNLT--FVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCeEE--EEEeHHHHHHHHHHHHHHH
Confidence 355677778777877654444456666 6678899999999886654
No 462
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=31.16 E-value=58 Score=23.87 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=22.1
Q ss_pred ChhHHHHHHHHHHHcCC-EEEEehhhh
Q 021893 79 PDGYLKAVRDLCSKYNI-LMIADEIQS 104 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi-~li~De~~~ 104 (306)
..+.++.+.+..++++. +||+||++.
T Consensus 72 ~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 72 SDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 45667888899998887 999999997
No 463
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=31.14 E-value=1.5e+02 Score=24.22 Aligned_cols=48 Identities=10% Similarity=0.189 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.|.--.+.+--+-++.+++++-.+. .|.... ++++.+++++|++.++.
T Consensus 139 tEaavdLa~lAGl~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 139 TEAAVDLARLAGLSPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp HHHHHHHHHHTTS-SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHhCCCCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 4444444444344578888888766 666666 99999999999999984
No 464
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=31.06 E-value=1.4e+02 Score=25.08 Aligned_cols=61 Identities=8% Similarity=0.012 Sum_probs=34.8
Q ss_pred CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH---HcC--CEEEEeh
Q 021893 37 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS---KYN--ILMIADE 101 (306)
Q Consensus 37 ~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~---~~g--i~li~De 101 (306)
.|+..-|...++.++..|.. .-.|++..+++-.|.-..-++.+++|.++.+ +++ +.+-+|.
T Consensus 111 aGlalnP~T~~~~l~~~l~~----vD~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDG 176 (229)
T PRK09722 111 VGLVLNPETPVESIKYYIHL----LDKITVMTVDPGFAGQPFIPEMLDKIAELKALRERNGLEYLIEVDG 176 (229)
T ss_pred EEEEeCCCCCHHHHHHHHHh----cCEEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 44566777778888888874 4444444444332223345666666666553 443 5566773
No 465
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=31.00 E-value=61 Score=31.16 Aligned_cols=63 Identities=17% Similarity=0.131 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCC---------------cccCChhHHHHHHHHHHHcCCEEEEehhhhccc
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAG---------------VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 107 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G---------------~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~ 107 (306)
.|+..+.+.|.... -.+..|.++|++...+ ....+.+.++++++.||++||-+|+|-++..++
T Consensus 108 G~~~gi~~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 108 GTFDAAIEKLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CCHHHHHHhhHHHHHcCCCEEEeCccccCCCCCCCCCCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 46666666555321 2467788888743211 113356789999999999999999999987543
No 466
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=30.98 E-value=2e+02 Score=21.04 Aligned_cols=46 Identities=22% Similarity=0.302 Sum_probs=30.6
Q ss_pred HHHHHHHHhcCCcEEEEEEcccc-CCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQ-GEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~-~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
..+.+.|.+ .++.+|+..+.. ...+...+ -..|++.|-+++++++.
T Consensus 60 ~~i~~~i~~--g~i~~VInt~~~~~~~~~~~d----g~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAE--GEIDAVIFFRDPLTAQPHEPD----VKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHc--CceeEEEEcCCCCCCCccccc----HHHHHHHHHHcCCCEEE
Confidence 345556664 478888777643 33221223 78999999999999884
No 467
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=30.97 E-value=88 Score=28.46 Aligned_cols=58 Identities=10% Similarity=0.076 Sum_probs=38.7
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC--------CcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA--------GVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~--------G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
..++..+++.+.+.+++ .++.++++.+.+... |....-++.+.++.++++++++.++.
T Consensus 140 ~l~~e~~le~I~~~i~~--~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 140 YLLAETNLEDILASIEE--LKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEEccCcHHHHHHHHHh--cCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 34455678888888875 367889999976542 11111134567788999999987653
No 468
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=30.88 E-value=1.2e+02 Score=21.76 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=19.6
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
-|++|-+.. .+.+..++|.++++++|..+.+
T Consensus 88 ~v~~EKP~~------~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 88 HVLVEKPLA------LTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp EEEEESSSS------SSHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEEEcCCc------CCHHHHHHHHHHHHHhCCEEEE
Confidence 555555532 2556677777777777776654
No 469
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=30.66 E-value=1.6e+02 Score=23.96 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=23.5
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
...+|+++-.+++.|.+.| ++.-.++++++|+.+.
T Consensus 112 ~kvvILLTDG~n~~~~i~P----~~aAa~lA~~~gV~iy 146 (191)
T cd01455 112 EAIVIVLSDANLERYGIQP----KKLADALAREPNVNAF 146 (191)
T ss_pred CcEEEEEeCCCcCCCCCCh----HHHHHHHHHhCCCEEE
Confidence 3456666666666666766 5556788888888654
No 470
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.64 E-value=1.9e+02 Score=22.59 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=23.8
Q ss_pred CcEEEEEEccccCCCC-------cccCChhHHHHHHHHHHHcCCEEE
Q 021893 59 DQIAGFLFEPIQGEAG-------VIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G-------~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
+.++++++.++..... ....-.++.+.+.++|+++++.++
T Consensus 95 ~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~v 141 (189)
T cd01825 95 PNASILLVGPPDSLQKTGAGRWRTPPGLDAVIAAQRRVAKEEGIAFW 141 (189)
T ss_pred CCCeEEEEcCCchhccCCCCCcccCCcHHHHHHHHHHHHHHcCCeEE
Confidence 5677777776532111 011123556788899999996554
No 471
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=30.50 E-value=1.4e+02 Score=23.85 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=24.7
Q ss_pred cEEEEEEccccCCC---C--cccCChhHHHHHHHHHHHcCCEEE
Q 021893 60 QIAGFLFEPIQGEA---G--VIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 60 ~~~~v~v~~~~~~~---G--~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
....|+++|+.... + ....-..+-+.+.++|+++|+.++
T Consensus 107 ~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 107 GATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred CCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 35667777653211 1 111235677899999999998885
No 472
>PRK03512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=30.45 E-value=74 Score=26.31 Aligned_cols=51 Identities=8% Similarity=0.160 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.+.++++++. ....|.+--..-+.- .-....+++.++|+++++.+|+.+-.
T Consensus 22 ~~~l~~~l~~---G~~~vqLR~k~~~~~---~~~~la~~l~~~~~~~~~~liInd~~ 72 (211)
T PRK03512 22 VQWIERLLDA---GVRTLQLRIKDRRDE---EVEADVVAAIALGRRYQARLFINDYW 72 (211)
T ss_pred HHHHHHHHhC---CCCEEEEcCCCCCHH---HHHHHHHHHHHHHHHhCCeEEEeCHH
Confidence 4678888884 344454432221110 01233567788899999999987644
No 473
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=30.44 E-value=91 Score=28.21 Aligned_cols=58 Identities=10% Similarity=-0.034 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.++.++.|+... ....-|+.+-. -+......-.+.+++|.+.|+++|+-+++|-.-.
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~-ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLH-IPEDDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE----------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCC-cCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 3666666666421 22333333322 2222222234668999999999999999996554
No 474
>PRK14057 epimerase; Provisional
Probab=30.33 E-value=1.8e+02 Score=24.96 Aligned_cols=61 Identities=10% Similarity=0.128 Sum_probs=36.6
Q ss_pred CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH---HHcC--CEEEEeh
Q 021893 37 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC---SKYN--ILMIADE 101 (306)
Q Consensus 37 ~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~---~~~g--i~li~De 101 (306)
.|+...|...++.++..+.. +-.|++..+++-.|.--.-++.+++|.++. ++++ +.+-+|.
T Consensus 135 aGlAlnP~Tp~e~i~~~l~~----vD~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDG 200 (254)
T PRK14057 135 RGISLCPATPLDVIIPILSD----VEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDG 200 (254)
T ss_pred eEEEECCCCCHHHHHHHHHh----CCEEEEEEECCCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEEC
Confidence 56778888889999988874 444444444433222333455566666544 3444 6677774
No 475
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=30.13 E-value=95 Score=26.44 Aligned_cols=88 Identities=18% Similarity=0.148 Sum_probs=49.0
Q ss_pred CcceEEEEecCCCCcccc-hhcccCCc-------cccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893 1 MQAIIVSCCGCFHGRTLA-AISMSCDN-------EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE 72 (306)
Q Consensus 1 ~~~~ii~~~~~~hg~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~ 72 (306)
|-.+|+++.|...|...+ .+...+.+ .+.. .......+..-++.|.+++++.|+++ ++.+ +|...|+-
T Consensus 1 ~~~~IlvlgGT~egr~la~~L~~~g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~--~i~~-VIDATHPf 76 (248)
T PRK08057 1 MMPRILLLGGTSEARALARALAAAGVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREE--GIDL-VIDATHPY 76 (248)
T ss_pred CCceEEEEechHHHHHHHHHHHhCCCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHC--CCCE-EEECCCcc
Confidence 556788998888887655 32222211 1111 11111123445555888899888864 3443 34444332
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
. .+.=+.+.+.|++.|+.++
T Consensus 77 A------~~is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 77 A------AQISANAAAACRALGIPYL 96 (248)
T ss_pred H------HHHHHHHHHHHHHhCCcEE
Confidence 2 2225677888888888877
No 476
>PRK14483 DhaKLM operon coactivator DhaQ; Provisional
Probab=30.06 E-value=2.1e+02 Score=25.54 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=41.2
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----CEEEEehhhh
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----ILMIADEIQS 104 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----i~li~De~~~ 104 (306)
-+|.-|+++++.+.++.-.....++++ +-|.+|++.. ..-..+.++..| ++++-|++-.
T Consensus 75 ~VFaSPs~~qI~~ai~av~~~~GvL~i--vkNYtGDvln----F~mA~E~a~~eGi~v~~VvV~DDva~ 137 (329)
T PRK14483 75 SIFTPPTAEQILAATRLVPKGKGVFFI--IKNFEADVAE----FSAAIQIARQEGRQIKYIIVHDDISV 137 (329)
T ss_pred cccCCCCHHHHHHHHHhhcCCCCEEEE--ecccHHHhhh----HHHHHHHHHhCCCcEEEEEeCCcccC
Confidence 455567899999999874333444444 4455788888 788888888665 5677787764
No 477
>cd03767 SR_Res_par Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.
Probab=30.00 E-value=1.6e+02 Score=22.54 Aligned_cols=48 Identities=27% Similarity=0.303 Sum_probs=27.5
Q ss_pred HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 49 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 49 ~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.+++..++++-.+..++.+... |.. ..+..++++.+.+++.+++++.+
T Consensus 20 ~l~~~a~~~g~~~~~i~~d~~S---G~~-~~Rp~~~~ll~~~~~gd~lvv~~ 67 (146)
T cd03767 20 SLEAFATERGFYIAGFYVENAS---GAK-LDRPELFRLLDDAQSGDVLLVEQ 67 (146)
T ss_pred HHHHHHHHCCCEEEEEEEECCc---CCC-CCCHHHHHHHHHhhCCCEEEEEe
Confidence 3444444454445566666543 322 23455788777888777766554
No 478
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=29.99 E-value=72 Score=18.87 Aligned_cols=22 Identities=27% Similarity=0.540 Sum_probs=17.6
Q ss_pred CChhHHHHHHHHHHHcCCEEEE
Q 021893 78 PPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~ 99 (306)
++-.+++.|...+++||+.-|+
T Consensus 14 Dp~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 14 DPLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred CHHHHHHHHHHHHhhCCEEEEE
Confidence 3456799999999999987664
No 479
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=29.85 E-value=1.2e+02 Score=25.21 Aligned_cols=40 Identities=13% Similarity=0.359 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+.++.++. .++.+|++.+..+.. +..+.+-|++.|+++|.
T Consensus 46 ~~i~~~i~---~~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 46 EQIEQAIS---QGVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHH---TTESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHH---hcCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 44555555 458889988876533 44556678899999985
No 480
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=29.83 E-value=1.5e+02 Score=26.84 Aligned_cols=55 Identities=13% Similarity=0.009 Sum_probs=35.8
Q ss_pred CHHHHHHHHHhc--CCcEEEEEEcc-----ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 46 DITALEKIFKES--GDQIAGFLFEP-----IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~--~~~~~~v~v~~-----~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+++++..+++.. ..+..+++|+- .+..+-...+ |..|..+.+.+++++|+|-+|+
T Consensus 220 t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~d----l~ai~~lk~~~~lPVi~DpsH~ 281 (352)
T PRK13396 220 TIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLD----LSVIPVLRSLTHLPIMIDPSHG 281 (352)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcC----HHHHHHHHHhhCCCEEECCccc
Confidence 455544444421 13456788877 2122234455 8999999888899999999997
No 481
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=29.80 E-value=39 Score=25.65 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccC----CCCc-ccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQG----EAGV-IIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~----~~G~-~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.|++.+-..+++. .--.++++.|+++ .+|. .-...++-++|.+.|+++|+ =|.|=..
T Consensus 36 ~Dl~l~L~~~k~~-g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf-~v~D~s~ 97 (130)
T PF04914_consen 36 DDLQLLLDVCKEL-GIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGF-NVADFSD 97 (130)
T ss_dssp HHHHHHHHHHHHT-T-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT---EEE-TT
T ss_pred HHHHHHHHHHHHc-CCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEeccc
Confidence 3566666666664 2344556666665 2442 11234567789999999999 6677443
No 482
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=29.54 E-value=58 Score=30.70 Aligned_cols=26 Identities=19% Similarity=0.115 Sum_probs=23.8
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.+.++++++.||++||-||+|-+.-
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 56779999999999999999999875
No 483
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=29.23 E-value=1.8e+02 Score=24.67 Aligned_cols=54 Identities=17% Similarity=0.140 Sum_probs=37.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.+..++..++..++-+-.+=+-+ +...+.+++.+++..++||+||+.+..-.+.
T Consensus 10 ~~~~~~d~Le~~g~yID~lKfg~----Gt~~l~~~~~l~eki~la~~~~V~v~~GGtl 63 (237)
T TIGR03849 10 PPKFVEDYLKVCGDYITFVKFGW----GTSALIDRDIVKEKIEMYKDYGIKVYPGGTL 63 (237)
T ss_pred CHHHHHHHHHHhhhheeeEEecC----ceEeeccHHHHHHHHHHHHHcCCeEeCCccH
Confidence 57778888886544444443333 2234557889999999999999998866543
No 484
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.04 E-value=96 Score=25.07 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHHcCCEEE
Q 021893 80 DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li 98 (306)
.++-+.+.++|+++++.++
T Consensus 155 ~~~~~~~~~~a~~~~~~~i 173 (208)
T cd01839 155 KGLADAYRALAEELGCHFF 173 (208)
T ss_pred HHHHHHHHHHHHHhCCCEE
Confidence 4566778899999997765
No 485
>cd07578 nitrilase_1_R1 First nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the first of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=28.59 E-value=1.1e+02 Score=25.78 Aligned_cols=19 Identities=5% Similarity=0.116 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHcCCEEEE
Q 021893 81 GYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~ 99 (306)
+.++.+.++++++++.+++
T Consensus 65 ~~~~~l~~~a~~~~i~ii~ 83 (258)
T cd07578 65 PTTARFAELAREHDCYIVV 83 (258)
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4588999999999998874
No 486
>cd07581 nitrilase_3 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=28.54 E-value=95 Score=26.08 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHcCCEEEE
Q 021893 81 GYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~ 99 (306)
.+++.+.++++++++.+++
T Consensus 61 ~~~~~l~~~a~~~~i~iv~ 79 (255)
T cd07581 61 PFVSALARLARELGITVVA 79 (255)
T ss_pred HHHHHHHHHHHHcCeEEEE
Confidence 5789999999999998884
No 487
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=28.47 E-value=1.2e+02 Score=22.96 Aligned_cols=19 Identities=42% Similarity=0.795 Sum_probs=14.9
Q ss_pred hhHHHHHHHHHHHcCCEEE
Q 021893 80 DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li 98 (306)
..+-+.+.++|+++++.++
T Consensus 129 ~~~~~~~~~~a~~~~~~~i 147 (179)
T PF13472_consen 129 DRYNQAIRELAKKYGVPFI 147 (179)
T ss_dssp HHHHHHHHHHHHHCTEEEE
T ss_pred HHHHHHHHHHHHHcCCEEE
Confidence 4556777889999988876
No 488
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=27.91 E-value=43 Score=29.37 Aligned_cols=25 Identities=20% Similarity=0.468 Sum_probs=21.4
Q ss_pred hhHHHHHHHHH-HHcCCEEEEehhhh
Q 021893 80 DGYLKAVRDLC-SKYNILMIADEIQS 104 (306)
Q Consensus 80 ~~~l~~i~~l~-~~~gi~li~De~~~ 104 (306)
...|++|.+.| ..++-++|+||+|.
T Consensus 158 ~sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 158 RSRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred cchHHHHHHHHhcCCCceEEeccchh
Confidence 45699999999 45888999999996
No 489
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=27.72 E-value=1.7e+02 Score=22.36 Aligned_cols=57 Identities=23% Similarity=0.253 Sum_probs=31.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHH-HHHcCCEEE-Eehhhh
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILMI-ADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l-~~~~gi~li-~De~~~ 104 (306)
+++.|.+.++++ ++..|++=-+.++.|.........++..+. .+++++.++ +||-++
T Consensus 42 ~~~~l~~~i~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 42 DWDRLEKLIKEW--QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred HHHHHHHHHHHh--CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 478899999986 344455444444555443222222232222 233466655 899886
No 490
>PRK05601 DNA polymerase III subunit epsilon; Validated
Probab=27.69 E-value=1.2e+02 Score=27.55 Aligned_cols=48 Identities=10% Similarity=0.056 Sum_probs=35.3
Q ss_pred CHHHHHHHHHhc--------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 46 DITALEKIFKES--------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~--------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
|.+.|.+.+-.. ..+|-+|+|+....-.|.. -.++++||+|+.|+.+.
T Consensus 309 ~~d~li~~~~~agL~y~~~~~r~tslvv~n~~~~~~gk~-----------~~a~~~gipl~~d~~fl 364 (377)
T PRK05601 309 DPDIIIQAIVRAGLAYSEKLTRQTSVVVCNQTRDLDGKA-----------MHAQRKGIPLLSDVAFL 364 (377)
T ss_pred CHHHHHHHHHHccchhhhccccceeEEEeCCCCCccchh-----------hhhhhcCCCccCHHHHH
Confidence 677776666542 2468889998887766632 26889999999999875
No 491
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=27.46 E-value=98 Score=22.07 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=30.4
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++.+-+..+.+..++.. ..+++++.. ...+ =+++.++|+++++.++.=
T Consensus 44 vIt~gdR~di~~~a~~~---~i~~iIltg------~~~~----~~~v~~la~~~~i~vi~t 91 (105)
T PF07085_consen 44 VITPGDREDIQLAAIEA---GIACIILTG------GLEP----SEEVLELAKELGIPVIST 91 (105)
T ss_dssp EEEETT-HHHHHHHCCT---TECEEEEET------T--------HHHHHHHHHHT-EEEE-
T ss_pred EEEeCCcHHHHHHHHHh---CCCEEEEeC------CCCC----CHHHHHHHHHCCCEEEEE
Confidence 55557777777777773 577777753 2344 578899999999999853
No 492
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=27.30 E-value=1.2e+02 Score=27.42 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=33.1
Q ss_pred CcEEEEEEccccCCCCcccCCh-------------hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPD-------------GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~-------------~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
++-.+|+.||.|-.-+....+. +.=-+|++++++||++++.|=..+
T Consensus 261 p~AdvVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enppLA 319 (363)
T COG1377 261 PKADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENPPLA 319 (363)
T ss_pred CCCCEEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecChHHH
Confidence 5667888888776554443322 345689999999999999986554
No 493
>PRK07106 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; Provisional
Probab=27.29 E-value=1.7e+02 Score=26.65 Aligned_cols=45 Identities=27% Similarity=0.402 Sum_probs=30.1
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
-+||++| .++.+.+. .+.+|+ .++|.+-+ +++.+.|.+||+-++.
T Consensus 338 AFFPF~D--~Id~Aa~~---GV~aIi-----QPGGSiRD-----~evI~aane~giaMvf 382 (390)
T PRK07106 338 AFFPFGD--NIERAAKS---GVKYIA-----QPGGSIRD-----DNVIETCNKYGMTMAF 382 (390)
T ss_pred ccCCCCc--hHHHHHHc---CCEEEE-----CCCCCCCc-----HHHHHHHHHhCCEEEE
Confidence 6778865 55555552 344443 45666665 7788999999998874
No 494
>PF10750 DUF2536: Protein of unknown function (DUF2536); InterPro: IPR019686 This entry represents proteins with unknown function appears to be restricted to Bacillus spp.
Probab=27.23 E-value=53 Score=21.55 Aligned_cols=21 Identities=24% Similarity=0.214 Sum_probs=17.5
Q ss_pred CCcccccCCCHHHHHHHHHhc
Q 021893 37 PGHLKVDFGDITALEKIFKES 57 (306)
Q Consensus 37 ~~~~~~~~~d~~~le~~i~~~ 57 (306)
+.+.++..+|+..||+.|.++
T Consensus 10 dKVEfFEA~~l~~LEkkIneq 30 (68)
T PF10750_consen 10 DKVEFFEANDLQTLEKKINEQ 30 (68)
T ss_pred eeeeEEecchHHHHHHHHHHH
Confidence 456788889999999999964
No 495
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=27.19 E-value=2.4e+02 Score=24.97 Aligned_cols=89 Identities=19% Similarity=0.216 Sum_probs=47.5
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEc-cccCCCCcccCChhHHH-------HHHHHHHHcCC----EEE-Eehhhhcc
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFE-PIQGEAGVIIPPDGYLK-------AVRDLCSKYNI----LMI-ADEIQSGL 106 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~-~~~~~~G~~~~~~~~l~-------~i~~l~~~~gi----~li-~De~~~g~ 106 (306)
+..+-.|.+.+.+++++. ++-+|+-- .-....-.+..+..|++ .|.+.+++|.. +-| .||+|+++
T Consensus 56 v~~DI~D~~~v~~~~~~~--~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l 133 (340)
T COG1088 56 VQGDICDRELVDRLFKEY--QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDL 133 (340)
T ss_pred EeccccCHHHHHHHHHhc--CCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccc
Confidence 334445889999999864 22222221 11112222444555554 57788888873 222 79999876
Q ss_pred cccccccccccCCCCCcEE-Eecccc
Q 021893 107 ARSGRMLASDWEEVRPDMV-ILGKAL 131 (306)
Q Consensus 107 ~~~g~~~~~~~~~~~~d~~-s~sK~~ 131 (306)
...+..| .+.....|.-. |-||+-
T Consensus 134 ~~~~~~F-tE~tp~~PsSPYSASKAa 158 (340)
T COG1088 134 GLDDDAF-TETTPYNPSSPYSASKAA 158 (340)
T ss_pred cCCCCCc-ccCCCCCCCCCcchhhhh
Confidence 4443333 34444555432 555544
No 496
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=27.05 E-value=1.1e+02 Score=19.51 Aligned_cols=38 Identities=24% Similarity=0.403 Sum_probs=26.1
Q ss_pred HHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 231 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 231 ~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..+.+..|.+-| |||.|....+++|...+-..+.+-++
T Consensus 12 ~lE~A~~La~~G----------IRFVpiPv~~dee~~~L~s~~~~kLe 49 (61)
T PF07131_consen 12 ALEMAHSLAHIG----------IRFVPIPVVTDEEFHTLSSQLSQKLE 49 (61)
T ss_pred HHHHHHHHHHcC----------ceeeccccccHHHHHHHHHHHHHHHH
Confidence 344555555555 67777677889998888777766665
No 497
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=26.96 E-value=44 Score=23.40 Aligned_cols=25 Identities=4% Similarity=0.061 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhhc
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQSG 105 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~g 105 (306)
+.-++|.+.+++||+++..|.....
T Consensus 32 ~iAe~II~~Ake~~Vpi~edp~Lv~ 56 (92)
T COG2257 32 EIAEKIIEKAKEHGVPIQEDPLLVE 56 (92)
T ss_pred HHHHHHHHHHHHcCCCcccCHHHHH
Confidence 3478999999999999999988763
No 498
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=26.86 E-value=2e+02 Score=24.82 Aligned_cols=52 Identities=15% Similarity=0.205 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+.++.++++++..+++|-+...............+.+.|-++++++|+++|+
T Consensus 90 ~ai~~a~~~~~~~~~ViN~SlG~~~~~~~~~~~~~~~~id~~a~~~gvlvV~ 141 (291)
T cd04847 90 RAIRRAVIQNPDIVRVFNLSLGSPLPIDDGRPSSWAAALDQLAAEYDVLFVV 141 (291)
T ss_pred HHHHHHHHhCCCceeEEEEecCCCCCccCCCCCcHHHHHHHHhccCCeEEEE
Confidence 3445555544333455555443322211111113345666788899999985
No 499
>TIGR03156 GTP_HflX GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like).
Probab=26.78 E-value=2.2e+02 Score=25.62 Aligned_cols=60 Identities=15% Similarity=0.249 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCC-EEEEehhhh
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-LMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi-~li~De~~~ 104 (306)
..+++++++++..+-++...++..-..+....+....-+++|.+++++.++ .+|+|+-.+
T Consensus 17 ~~~~E~~~L~~~~~~~v~~~~~~~~~~~~~~~~~g~gk~~e~~~~~~~~~~~~vi~~~~l~ 77 (351)
T TIGR03156 17 ESLEELAELAETAGAEVVGTVTQKRSRPDPATYIGKGKVEEIAELVEELEADLVIFDHELS 77 (351)
T ss_pred hhHHHHHHHHHHCCCEEEEEEEEecCCCCCCeEecccHHHHHHHHHHhcCCCEEEECCCCC
Confidence 358899999988766666666655432222234456669999999998887 777887665
No 500
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=26.73 E-value=1.1e+02 Score=22.40 Aligned_cols=43 Identities=7% Similarity=0.058 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
++.++++.+. .++.+++.+. ++-+++.+.|+++|+.++-..+.
T Consensus 69 ~~~v~~~~~~---g~~~v~~~~g-----------~~~~~~~~~a~~~gi~vigp~C~ 111 (116)
T PF13380_consen 69 PEIVDEAAAL---GVKAVWLQPG-----------AESEELIEAAREAGIRVIGPNCL 111 (116)
T ss_dssp HHHHHHHHHH---T-SEEEE-TT-----------S--HHHHHHHHHTT-EEEESS-H
T ss_pred HHHHHHHHHc---CCCEEEEEcc-----------hHHHHHHHHHHHcCCEEEeCCcc
Confidence 4444544443 3556666554 33789999999999999866554
Done!