Query 021893
Match_columns 306
No_of_seqs 122 out of 1216
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 10:54:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 100.0 3.7E-44 1.3E-48 329.1 32.2 278 2-281 151-455 (456)
2 4e3q_A Pyruvate transaminase; 100.0 5.8E-43 2E-47 322.3 30.4 275 2-281 160-468 (473)
3 3i5t_A Aminotransferase; pyrid 100.0 5.9E-41 2E-45 311.4 29.1 277 2-283 146-456 (476)
4 4ao9_A Beta-phenylalanine amin 100.0 6.5E-41 2.2E-45 306.4 28.1 265 2-282 169-447 (454)
5 3oks_A 4-aminobutyrate transam 100.0 9.5E-40 3.2E-44 301.5 31.4 275 2-278 148-449 (451)
6 3hmu_A Aminotransferase, class 100.0 2.4E-40 8.2E-45 306.9 27.3 274 2-281 148-452 (472)
7 3dod_A Adenosylmethionine-8-am 100.0 7.3E-40 2.5E-44 302.1 29.3 278 2-283 136-445 (448)
8 4ffc_A 4-aminobutyrate aminotr 100.0 1.1E-39 3.8E-44 301.2 30.2 277 2-283 151-451 (453)
9 3n5m_A Adenosylmethionine-8-am 100.0 3.6E-39 1.2E-43 297.8 32.9 274 2-278 139-450 (452)
10 3gju_A Putative aminotransfera 100.0 1.9E-39 6.5E-44 300.2 30.8 278 2-282 144-457 (460)
11 3tfu_A Adenosylmethionine-8-am 100.0 4.7E-40 1.6E-44 303.9 26.6 274 2-282 167-454 (457)
12 1z7d_A Ornithine aminotransfer 100.0 2.5E-39 8.6E-44 297.2 30.5 273 3-282 157-430 (433)
13 3nx3_A Acoat, acetylornithine 100.0 3.2E-39 1.1E-43 292.8 29.5 269 2-278 124-393 (395)
14 2oat_A Ornithine aminotransfer 100.0 5E-39 1.7E-43 295.7 30.1 269 3-278 168-437 (439)
15 4a6r_A Omega transaminase; tra 100.0 3E-39 1E-43 298.9 26.3 277 2-282 143-450 (459)
16 3dxv_A Alpha-amino-epsilon-cap 100.0 1.6E-38 5.6E-43 292.2 29.5 278 2-283 130-427 (439)
17 3i4j_A Aminotransferase, class 100.0 6.3E-38 2.2E-42 287.5 28.6 277 2-281 121-428 (430)
18 2pb2_A Acetylornithine/succiny 100.0 4.9E-38 1.7E-42 287.6 27.0 272 3-281 147-418 (420)
19 2cjg_A L-lysine-epsilon aminot 100.0 1.4E-37 4.9E-42 286.8 29.3 271 2-281 157-448 (449)
20 3l44_A Glutamate-1-semialdehyd 100.0 1.9E-37 6.4E-42 284.7 28.8 276 2-283 137-432 (434)
21 4a0g_A Adenosylmethionine-8-am 100.0 3.4E-38 1.2E-42 308.1 19.0 278 2-282 483-829 (831)
22 1zod_A DGD, 2,2-dialkylglycine 100.0 2E-36 7E-41 277.7 28.7 276 2-281 128-432 (433)
23 3fq8_A Glutamate-1-semialdehyd 100.0 5.1E-36 1.7E-40 274.6 31.1 271 2-278 134-425 (427)
24 4e77_A Glutamate-1-semialdehyd 100.0 3.1E-36 1.1E-40 276.3 29.1 271 2-278 135-427 (429)
25 3k28_A Glutamate-1-semialdehyd 100.0 1.8E-36 6.2E-41 277.9 27.3 273 2-281 135-427 (429)
26 3a8u_X Omega-amino acid--pyruv 100.0 2.6E-36 8.7E-41 278.4 28.0 275 2-281 142-447 (449)
27 3ruy_A Ornithine aminotransfer 100.0 3E-36 1E-40 273.0 27.7 264 3-278 128-392 (392)
28 1ohv_A 4-aminobutyrate aminotr 100.0 4.5E-36 1.5E-40 278.3 28.4 267 3-281 180-471 (472)
29 4adb_A Succinylornithine trans 100.0 7.6E-36 2.6E-40 271.3 27.5 274 3-283 129-402 (406)
30 1s0a_A Adenosylmethionine-8-am 100.0 1.4E-35 4.8E-40 271.9 29.3 273 2-282 134-425 (429)
31 2eo5_A 419AA long hypothetical 100.0 1.8E-35 6.1E-40 270.5 27.0 264 2-281 129-418 (419)
32 2epj_A Glutamate-1-semialdehyd 100.0 5.4E-35 1.8E-39 268.4 28.9 274 2-281 138-431 (434)
33 1sff_A 4-aminobutyrate aminotr 100.0 2.4E-34 8.2E-39 263.1 31.6 277 3-282 129-425 (426)
34 2ord_A Acoat, acetylornithine 100.0 7.5E-35 2.6E-39 264.3 27.4 267 3-278 129-395 (397)
35 2e7u_A Glutamate-1-semialdehyd 100.0 3.7E-34 1.3E-38 262.1 28.1 270 2-277 134-424 (424)
36 2cy8_A D-phgat, D-phenylglycin 100.0 5.8E-34 2E-38 263.0 24.8 273 2-283 139-437 (453)
37 2yky_A Beta-transaminase; tran 100.0 2.2E-37 7.7E-42 284.7 0.0 265 2-282 182-461 (465)
38 1vef_A Acetylornithine/acetyl- 100.0 2.1E-33 7E-38 254.5 24.8 265 2-278 130-395 (395)
39 2eh6_A Acoat, acetylornithine 100.0 1.3E-32 4.3E-37 247.5 25.6 258 3-277 118-375 (375)
40 3l8a_A METC, putative aminotra 99.9 2.5E-27 8.4E-32 216.6 16.4 258 3-278 144-420 (421)
41 2w8t_A SPT, serine palmitoyltr 99.9 3.2E-26 1.1E-30 209.6 20.1 231 39-286 172-420 (427)
42 3op7_A Aminotransferase class 99.9 1.9E-26 6.7E-31 207.1 17.2 223 46-283 143-373 (375)
43 1yiz_A Kynurenine aminotransfe 99.9 1.5E-25 5.2E-30 205.0 19.8 261 2-278 125-427 (429)
44 3aow_A Putative uncharacterize 99.9 1E-25 3.6E-30 207.5 16.3 226 45-281 198-445 (448)
45 3tqx_A 2-amino-3-ketobutyrate 99.9 2.4E-25 8.2E-30 201.4 17.8 227 39-282 151-397 (399)
46 2r2n_A Kynurenine/alpha-aminoa 99.9 3.1E-25 1.1E-29 202.9 18.1 266 4-278 110-422 (425)
47 2zc0_A Alanine glyoxylate tran 99.9 4.3E-25 1.5E-29 200.5 18.1 257 2-282 122-405 (407)
48 3dzz_A Putative pyridoxal 5'-p 99.9 4.4E-25 1.5E-29 199.1 17.9 226 45-282 147-390 (391)
49 1vp4_A Aminotransferase, putat 99.9 1.1E-25 3.7E-30 205.9 13.4 261 3-283 134-420 (425)
50 1gd9_A Aspartate aminotransfer 99.9 4E-25 1.4E-29 199.5 16.8 221 46-281 149-386 (389)
51 3fdb_A Beta C-S lyase, putativ 99.9 1.2E-25 4.2E-30 201.9 12.7 223 45-281 138-376 (377)
52 3b46_A Aminotransferase BNA3; 99.9 8.8E-25 3E-29 201.2 18.1 219 45-275 189-442 (447)
53 3kki_A CAI-1 autoinducer synth 99.9 6.6E-25 2.3E-29 199.6 16.8 221 40-281 168-404 (409)
54 3nra_A Aspartate aminotransfer 99.9 7.5E-26 2.6E-30 205.3 10.0 223 46-282 168-406 (407)
55 2o1b_A Aminotransferase, class 99.9 4.3E-25 1.5E-29 200.6 15.0 255 3-281 134-403 (404)
56 1fc4_A 2-amino-3-ketobutyrate 99.9 2.9E-24 9.8E-29 194.7 20.1 226 40-282 154-398 (401)
57 3piu_A 1-aminocyclopropane-1-c 99.9 2.1E-24 7.1E-29 197.9 19.0 226 46-282 174-433 (435)
58 2x5d_A Probable aminotransfera 99.9 2.2E-25 7.6E-30 202.9 12.5 222 46-283 161-400 (412)
59 3h14_A Aminotransferase, class 99.9 3.4E-25 1.2E-29 200.2 13.5 223 46-285 153-386 (391)
60 2z61_A Probable aspartate amin 99.9 1.6E-25 5.5E-30 200.9 11.1 213 45-278 142-369 (370)
61 1iay_A ACC synthase 2, 1-amino 99.9 4.4E-24 1.5E-28 195.3 20.8 262 2-278 132-425 (428)
62 3fvs_A Kynurenine--oxoglutarat 99.9 9.5E-25 3.3E-29 199.2 16.3 221 46-278 163-420 (422)
63 2dou_A Probable N-succinyldiam 99.9 1.7E-25 6E-30 201.1 11.2 217 45-277 146-375 (376)
64 2zyj_A Alpha-aminodipate amino 99.9 6.4E-25 2.2E-29 198.8 14.8 255 2-281 115-393 (397)
65 2x5f_A Aspartate_tyrosine_phen 99.9 1.8E-24 6.1E-29 198.0 17.9 264 2-281 137-429 (430)
66 3g0t_A Putative aminotransfera 99.9 6.6E-25 2.3E-29 201.1 15.0 219 46-278 170-435 (437)
67 4dq6_A Putative pyridoxal phos 99.9 2.1E-24 7.1E-29 194.7 17.6 220 46-278 154-391 (391)
68 1d2f_A MALY protein; aminotran 99.9 5.8E-24 2E-28 192.1 20.3 261 3-281 112-389 (390)
69 3a2b_A Serine palmitoyltransfe 99.9 3.4E-24 1.2E-28 194.1 18.7 261 4-282 105-393 (398)
70 3ele_A Amino transferase; RER0 99.9 9.7E-25 3.3E-29 197.6 14.8 217 46-282 161-397 (398)
71 1c7n_A Cystalysin; transferase 99.9 2.3E-24 7.9E-29 195.2 17.2 227 45-283 151-395 (399)
72 1b5p_A Protein (aspartate amin 99.9 8.2E-25 2.8E-29 197.5 13.8 219 46-278 153-383 (385)
73 1v2d_A Glutamine aminotransfer 99.9 1.8E-24 6.1E-29 194.8 15.7 218 45-283 140-373 (381)
74 3euc_A Histidinol-phosphate am 99.9 2.1E-23 7E-28 186.9 22.2 214 45-278 144-366 (367)
75 3dyd_A Tyrosine aminotransfera 99.9 1.7E-24 5.7E-29 198.2 15.4 224 46-282 180-425 (427)
76 1o4s_A Aspartate aminotransfer 99.9 4.6E-25 1.6E-29 199.4 11.4 215 46-278 163-387 (389)
77 1j32_A Aspartate aminotransfer 99.9 1.3E-24 4.4E-29 196.1 14.4 222 46-281 152-387 (388)
78 2o0r_A RV0858C (N-succinyldiam 99.9 7.1E-25 2.4E-29 199.5 12.5 221 45-278 148-394 (411)
79 3jtx_A Aminotransferase; NP_28 99.9 1.7E-24 5.8E-29 195.8 14.9 251 3-277 121-395 (396)
80 3ezs_A Aminotransferase ASPB; 99.9 5.5E-25 1.9E-29 197.7 11.3 208 49-278 146-373 (376)
81 3ffh_A Histidinol-phosphate am 99.9 5.3E-24 1.8E-28 190.4 17.6 210 46-277 144-363 (363)
82 3kax_A Aminotransferase, class 99.9 2.2E-24 7.4E-29 194.0 14.7 221 46-278 145-383 (383)
83 1u08_A Hypothetical aminotrans 99.9 1.4E-24 4.7E-29 195.9 13.0 218 45-275 151-385 (386)
84 3ly1_A Putative histidinol-pho 99.9 8.5E-24 2.9E-28 188.3 17.9 213 46-278 128-350 (354)
85 3cq5_A Histidinol-phosphate am 99.9 7.7E-23 2.6E-27 183.4 23.9 246 2-278 116-366 (369)
86 3e2y_A Kynurenine-oxoglutarate 99.9 3.9E-24 1.3E-28 194.3 15.1 218 46-275 156-408 (410)
87 1bs0_A Protein (8-amino-7-oxon 99.9 1.4E-23 4.8E-28 189.1 18.4 244 4-276 124-383 (384)
88 2dr1_A PH1308 protein, 386AA l 99.9 5.4E-23 1.8E-27 185.0 22.2 220 45-282 132-380 (386)
89 1fg7_A Histidinol phosphate am 99.9 1.7E-23 5.9E-28 186.9 17.9 243 3-275 101-353 (356)
90 3qgu_A LL-diaminopimelate amin 99.9 3.3E-24 1.1E-28 197.3 13.1 260 2-278 155-438 (449)
91 3kgw_A Alanine-glyoxylate amin 99.9 2.6E-23 8.9E-28 187.4 18.4 222 45-283 135-390 (393)
92 3d6k_A Putative aminotransfera 99.9 1.3E-23 4.5E-28 191.9 16.3 227 45-281 165-418 (422)
93 2gb3_A Aspartate aminotransfer 99.9 1.8E-24 6.1E-29 196.8 10.0 217 47-282 164-403 (409)
94 3ez1_A Aminotransferase MOCR f 99.9 3.4E-23 1.2E-27 189.1 18.2 229 45-282 158-416 (423)
95 3rq1_A Aminotransferase class 99.9 1.3E-23 4.3E-28 191.6 15.3 222 46-283 163-417 (418)
96 1xi9_A Putative transaminase; 99.9 8.9E-24 3E-28 192.0 14.0 223 46-282 163-404 (406)
97 3ppl_A Aspartate aminotransfer 99.9 2.2E-23 7.5E-28 190.6 16.6 226 46-281 168-420 (427)
98 3ftb_A Histidinol-phosphate am 99.9 2.1E-22 7.2E-27 179.7 22.4 248 3-278 99-359 (361)
99 3if2_A Aminotransferase; YP_26 99.9 1E-23 3.4E-28 193.7 14.1 228 46-282 192-441 (444)
100 3zrp_A Serine-pyruvate aminotr 99.9 2.3E-22 7.7E-27 180.7 22.5 219 45-283 114-365 (384)
101 3get_A Histidinol-phosphate am 99.9 2.1E-23 7.3E-28 186.6 14.9 213 45-278 141-365 (365)
102 2bwn_A 5-aminolevulinate synth 99.9 8E-23 2.8E-27 185.2 18.8 223 39-278 156-398 (401)
103 1m32_A 2-aminoethylphosphonate 99.9 2.3E-22 8E-27 179.3 21.2 222 44-281 116-365 (366)
104 3ei9_A LL-diaminopimelate amin 99.9 9.3E-24 3.2E-28 193.4 12.3 262 2-278 142-426 (432)
105 3nnk_A Ureidoglycine-glyoxylat 99.9 4.8E-23 1.6E-27 187.0 16.2 220 46-282 126-391 (411)
106 1kmj_A Selenocysteine lyase; p 99.9 2.2E-22 7.4E-27 182.2 20.2 252 2-281 113-405 (406)
107 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 2.4E-23 8.1E-28 186.4 13.6 248 2-281 93-370 (371)
108 3e9k_A Kynureninase; kynurenin 99.9 7.9E-23 2.7E-27 189.0 16.2 263 2-281 155-461 (465)
109 1elu_A L-cysteine/L-cystine C- 99.9 2E-22 7E-27 181.5 18.5 211 45-275 142-387 (390)
110 3g7q_A Valine-pyruvate aminotr 99.9 2.8E-23 9.5E-28 189.1 12.2 223 46-282 171-414 (417)
111 1lc5_A COBD, L-threonine-O-3-p 99.9 1.2E-22 4.2E-27 181.7 16.1 251 3-281 99-360 (364)
112 3f0h_A Aminotransferase; RER07 99.9 4.5E-22 1.5E-26 178.5 19.0 214 45-278 132-372 (376)
113 3ke3_A Putative serine-pyruvat 99.9 3.9E-23 1.3E-27 186.2 12.0 264 2-282 74-377 (379)
114 3hdo_A Histidinol-phosphate am 99.9 5.9E-23 2E-27 183.5 12.8 198 61-278 150-353 (360)
115 3f9t_A TDC, L-tyrosine decarbo 99.9 7E-22 2.4E-26 178.0 19.8 214 46-278 159-396 (397)
116 3b1d_A Betac-S lyase; HET: PLP 99.8 8.1E-25 2.8E-29 197.9 0.0 222 46-278 152-391 (392)
117 1ajs_A Aspartate aminotransfer 99.9 6.9E-23 2.4E-27 186.3 12.7 255 3-281 131-411 (412)
118 3isl_A Purine catabolism prote 99.9 3E-22 1E-26 182.0 16.7 218 46-282 124-391 (416)
119 1bw0_A TAT, protein (tyrosine 99.9 1.6E-22 5.4E-27 184.1 14.5 225 46-282 166-414 (416)
120 3asa_A LL-diaminopimelate amin 99.9 4.3E-23 1.5E-27 187.1 10.6 211 59-282 162-394 (400)
121 1t3i_A Probable cysteine desul 99.9 4E-21 1.4E-25 174.7 23.0 216 45-283 157-415 (420)
122 3t18_A Aminotransferase class 99.9 1.1E-22 3.8E-27 185.0 12.2 260 4-282 103-411 (413)
123 1vjo_A Alanine--glyoxylate ami 99.9 1.4E-21 4.7E-26 176.5 17.9 215 45-278 146-393 (393)
124 2q7w_A Aspartate aminotransfer 99.9 5.9E-23 2E-27 185.6 8.7 248 2-277 120-396 (396)
125 2z9v_A Aspartate aminotransfer 99.9 2E-21 6.8E-26 175.3 18.4 220 45-282 120-372 (392)
126 1qz9_A Kynureninase; kynurenin 99.9 2.6E-21 8.9E-26 176.0 19.1 248 3-281 119-402 (416)
127 2yrr_A Aminotransferase, class 99.9 1E-21 3.5E-26 174.3 15.1 215 45-278 111-351 (353)
128 2ay1_A Aroat, aromatic amino a 99.9 2.1E-22 7.3E-27 181.9 10.6 246 3-276 118-392 (394)
129 3f6t_A Aspartate aminotransfer 99.9 8.2E-22 2.8E-26 185.1 13.4 224 46-282 233-526 (533)
130 3cai_A Possible aminotransfera 99.9 1.7E-20 5.7E-25 170.1 21.6 209 46-275 154-404 (406)
131 1yaa_A Aspartate aminotransfer 99.9 8.1E-22 2.8E-26 179.3 12.6 220 46-281 162-411 (412)
132 2huf_A Alanine glyoxylate amin 99.9 4.7E-21 1.6E-25 172.9 16.8 220 44-283 130-385 (393)
133 1cs1_A CGS, protein (cystathio 99.9 6.5E-21 2.2E-25 172.0 16.8 246 3-276 92-383 (386)
134 1iug_A Putative aspartate amin 99.9 5.6E-21 1.9E-25 169.7 15.2 211 46-281 113-348 (352)
135 3lvm_A Cysteine desulfurase; s 99.9 3.3E-20 1.1E-24 169.0 20.3 214 46-284 152-402 (423)
136 3tcm_A Alanine aminotransferas 99.9 3.9E-21 1.3E-25 179.3 14.0 269 3-282 158-495 (500)
137 3ihj_A Alanine aminotransferas 99.9 4.2E-21 1.4E-25 178.9 14.1 270 3-282 154-494 (498)
138 4f4e_A Aromatic-amino-acid ami 99.9 3E-21 1E-25 176.1 12.4 218 46-278 181-420 (420)
139 3fsl_A Aromatic-amino-acid ami 99.9 1.7E-21 6E-26 176.0 10.5 217 46-277 159-397 (397)
140 2ch1_A 3-hydroxykynurenine tra 99.8 4.5E-20 1.6E-24 166.6 19.7 220 45-283 130-385 (396)
141 3mad_A Sphingosine-1-phosphate 99.8 1.6E-20 5.6E-25 175.7 17.0 222 46-285 228-473 (514)
142 1eg5_A Aminotransferase; PLP-d 99.8 4.5E-20 1.6E-24 165.6 19.2 215 45-283 127-378 (384)
143 2rfv_A Methionine gamma-lyase; 99.8 9.7E-21 3.3E-25 171.6 14.4 222 39-276 131-396 (398)
144 3fkd_A L-threonine-O-3-phospha 99.8 2.3E-20 8E-25 165.9 16.6 205 59-283 128-344 (350)
145 3p1t_A Putative histidinol-pho 99.8 6.1E-20 2.1E-24 162.2 18.0 204 46-278 126-335 (337)
146 4eu1_A Mitochondrial aspartate 99.8 7.6E-21 2.6E-25 172.8 12.5 217 46-278 169-409 (409)
147 4hvk_A Probable cysteine desul 99.8 2E-20 7E-25 167.5 14.9 214 46-283 127-375 (382)
148 1uu1_A Histidinol-phosphate am 99.8 6.3E-20 2.2E-24 162.3 16.4 194 60-276 138-334 (335)
149 1pff_A Methionine gamma-lyase; 99.8 7.1E-20 2.4E-24 161.6 16.5 217 40-276 66-330 (331)
150 3qhx_A Cystathionine gamma-syn 99.8 3.7E-20 1.3E-24 167.5 14.6 239 3-273 106-391 (392)
151 2bkw_A Alanine-glyoxylate amin 99.8 8.4E-20 2.9E-24 164.0 16.7 212 45-278 124-382 (385)
152 1e5e_A MGL, methionine gamma-l 99.8 4.8E-20 1.6E-24 167.4 15.2 221 39-283 129-397 (404)
153 2dkj_A Serine hydroxymethyltra 99.8 5.6E-20 1.9E-24 166.6 14.8 255 2-280 109-387 (407)
154 1gc0_A Methionine gamma-lyase; 99.8 2.6E-19 9E-24 162.2 18.9 246 3-276 105-397 (398)
155 3k7y_A Aspartate aminotransfer 99.8 7.2E-21 2.5E-25 172.7 7.5 256 5-278 100-403 (405)
156 3meb_A Aspartate aminotransfer 99.8 3.3E-20 1.1E-24 170.7 12.0 220 46-282 188-445 (448)
157 7aat_A Aspartate aminotransfer 99.8 2.3E-20 8E-25 169.0 10.5 218 46-278 161-401 (401)
158 3ndn_A O-succinylhomoserine su 99.8 3.4E-20 1.2E-24 168.8 11.1 217 38-277 147-413 (414)
159 4eb5_A Probable cysteine desul 99.8 3.8E-19 1.3E-23 159.6 17.1 215 45-283 126-375 (382)
160 1ibj_A CBL, cystathionine beta 99.8 1.5E-19 5.1E-24 166.7 14.6 221 39-281 199-462 (464)
161 1jg8_A L-ALLO-threonine aldola 99.8 2.5E-19 8.7E-24 158.9 15.3 221 46-278 115-344 (347)
162 1wyu_B Glycine dehydrogenase s 99.8 9.1E-19 3.1E-23 162.2 19.6 241 4-280 158-440 (474)
163 1ax4_A Tryptophanase; tryptoph 99.8 7.2E-19 2.4E-23 162.4 18.7 227 45-284 167-444 (467)
164 2oqx_A Tryptophanase; lyase, p 99.8 1.5E-18 5.2E-23 160.2 20.8 229 46-283 168-444 (467)
165 2vi8_A Serine hydroxymethyltra 99.8 4.4E-19 1.5E-23 160.6 16.1 218 45-282 150-388 (405)
166 2zy4_A L-aspartate beta-decarb 99.8 1.7E-19 5.9E-24 169.5 13.6 228 45-282 233-523 (546)
167 3ecd_A Serine hydroxymethyltra 99.8 6.9E-19 2.4E-23 160.2 16.9 219 45-281 159-397 (425)
168 1n8p_A Cystathionine gamma-lya 99.8 4.7E-19 1.6E-23 160.3 14.2 219 39-276 121-391 (393)
169 4h51_A Aspartate aminotransfer 99.8 7.3E-19 2.5E-23 159.8 15.1 221 46-283 176-419 (420)
170 1svv_A Threonine aldolase; str 99.8 3.6E-19 1.2E-23 158.3 12.8 214 46-278 127-356 (359)
171 1v72_A Aldolase; PLP-dependent 99.8 1.8E-18 6.2E-23 153.6 16.6 211 46-278 122-351 (356)
172 3mc6_A Sphingosine-1-phosphate 99.8 5.9E-19 2E-23 164.4 13.9 221 46-285 195-441 (497)
173 3a9z_A Selenocysteine lyase; P 99.8 1.4E-18 4.8E-23 158.8 16.0 218 45-282 163-429 (432)
174 3cog_A Cystathionine gamma-lya 99.8 7.2E-19 2.5E-23 159.6 13.7 247 2-278 105-400 (403)
175 3vax_A Putative uncharacterize 99.8 7.7E-19 2.6E-23 158.7 13.8 208 46-278 148-398 (400)
176 3ffr_A Phosphoserine aminotran 99.8 8.1E-19 2.8E-23 156.2 13.8 206 46-277 121-361 (362)
177 2ez2_A Beta-tyrosinase, tyrosi 99.8 3.6E-18 1.2E-22 157.3 17.8 230 46-284 159-434 (456)
178 3acz_A Methionine gamma-lyase; 99.8 1.5E-18 5.2E-23 156.8 14.9 241 3-278 99-387 (389)
179 1qgn_A Protein (cystathionine 99.8 1.4E-18 4.9E-23 159.1 14.0 219 39-278 181-443 (445)
180 2aeu_A Hypothetical protein MJ 99.8 1E-18 3.5E-23 157.0 12.5 223 45-282 129-372 (374)
181 2cb1_A O-acetyl homoserine sul 99.8 7.1E-18 2.4E-22 153.5 17.6 208 40-275 124-411 (412)
182 3pj0_A LMO0305 protein; struct 99.8 2.1E-18 7.1E-23 153.7 13.6 217 46-276 127-358 (359)
183 2oga_A Transaminase; PLP-depen 99.8 4.6E-18 1.6E-22 154.0 15.8 246 2-282 103-397 (399)
184 3nmy_A Xometc, cystathionine g 99.8 1E-18 3.6E-23 158.2 11.2 244 2-278 105-397 (400)
185 3n0l_A Serine hydroxymethyltra 99.8 2.3E-17 7.8E-22 149.8 19.1 217 45-281 151-389 (417)
186 3h7f_A Serine hydroxymethyltra 99.8 7.6E-18 2.6E-22 154.9 15.5 225 44-282 171-415 (447)
187 1mdo_A ARNB aminotransferase; 99.8 1.2E-17 4.1E-22 150.5 16.1 217 45-282 115-387 (393)
188 3lws_A Aromatic amino acid bet 99.8 6.3E-18 2.2E-22 150.5 14.0 218 45-277 125-356 (357)
189 1b9h_A AHBA synthase, protein 99.8 2.1E-17 7.1E-22 148.9 16.3 211 46-278 115-386 (388)
190 2qma_A Diaminobutyrate-pyruvat 99.7 1.1E-16 3.7E-21 149.1 21.3 225 46-281 241-496 (497)
191 3uwc_A Nucleotide-sugar aminot 99.7 1.6E-17 5.5E-22 148.8 14.0 208 46-278 114-369 (374)
192 3dr4_A Putative perosamine syn 99.7 1.3E-17 4.5E-22 150.4 12.9 239 3-277 97-390 (391)
193 2fnu_A Aminotransferase; prote 99.7 2E-17 7E-22 148.0 14.0 212 46-281 110-372 (375)
194 2ctz_A O-acetyl-L-homoserine s 99.7 9.9E-18 3.4E-22 152.9 12.2 241 2-277 97-420 (421)
195 3frk_A QDTB; aminotransferase, 99.7 6.4E-18 2.2E-22 151.5 10.5 209 46-278 113-366 (373)
196 2z67_A O-phosphoseryl-tRNA(SEC 99.7 8.3E-17 2.8E-21 148.3 18.0 218 45-277 214-455 (456)
197 1o69_A Aminotransferase; struc 99.7 5.1E-16 1.8E-20 140.3 21.4 218 45-278 107-385 (394)
198 2fq6_A Cystathionine beta-lyas 99.7 1.4E-17 4.7E-22 151.5 10.9 222 39-275 149-413 (415)
199 3gbx_A Serine hydroxymethyltra 99.7 9E-17 3.1E-21 146.0 15.7 216 45-281 156-396 (420)
200 2x3l_A ORN/Lys/Arg decarboxyla 99.7 1.9E-17 6.4E-22 152.2 11.1 201 59-282 145-354 (446)
201 3bwn_A AT1G70560, L-tryptophan 99.7 3.3E-18 1.1E-22 154.6 5.8 247 3-278 92-385 (391)
202 2jis_A Cysteine sulfinic acid 99.7 1.5E-15 5E-20 142.1 23.2 224 46-278 242-513 (515)
203 2po3_A 4-dehydrase; external a 99.7 1.3E-16 4.6E-21 145.5 14.9 214 46-281 127-386 (424)
204 2okj_A Glutamate decarboxylase 99.7 2.1E-15 7.2E-20 140.6 22.9 225 46-281 228-502 (504)
205 1w23_A Phosphoserine aminotran 99.7 1.7E-16 5.9E-21 141.2 14.8 208 45-278 128-358 (360)
206 2dgk_A GAD-beta, GADB, glutama 99.7 3.4E-15 1.2E-19 137.4 23.5 230 46-288 176-441 (452)
207 2fyf_A PSAT, phosphoserine ami 99.7 1.3E-16 4.6E-21 144.2 13.7 198 59-278 164-396 (398)
208 3nyt_A Aminotransferase WBPE; 99.7 1.9E-16 6.4E-21 141.7 14.0 206 46-276 112-360 (367)
209 3ri6_A O-acetylhomoserine sulf 99.7 1.4E-16 4.8E-21 145.5 12.3 213 39-277 149-429 (430)
210 1rv3_A Serine hydroxymethyltra 99.7 4.7E-16 1.6E-20 144.3 14.5 215 45-280 180-430 (483)
211 3hbx_A GAD 1, glutamate decarb 99.7 3.3E-15 1.1E-19 139.2 20.1 229 46-288 191-451 (502)
212 2c0r_A PSAT, phosphoserine ami 99.6 3.3E-15 1.1E-19 133.2 16.3 199 59-278 141-359 (362)
213 4e1o_A HDC, histidine decarbox 99.6 1.7E-14 5.7E-19 133.8 21.0 225 46-282 224-479 (481)
214 2c81_A Glutamine-2-deoxy-scyll 99.6 2.2E-15 7.6E-20 137.1 14.3 214 46-281 119-414 (418)
215 2hox_A ALLIIN lyase 1; cystein 99.6 2.8E-16 9.6E-21 143.6 7.8 251 3-278 124-423 (427)
216 3ht4_A Aluminum resistance pro 99.6 4E-15 1.4E-19 135.8 15.4 224 2-242 107-345 (431)
217 3vp6_A Glutamate decarboxylase 99.6 4.2E-14 1.4E-18 132.0 21.6 227 46-282 231-506 (511)
218 1js3_A DDC;, DOPA decarboxylas 99.6 2.4E-14 8.2E-19 132.9 19.6 223 46-283 218-476 (486)
219 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.6 1.7E-14 5.7E-19 132.1 17.4 211 46-278 147-434 (437)
220 3k40_A Aromatic-L-amino-acid d 99.6 7.2E-14 2.4E-18 129.3 21.6 226 45-282 216-472 (475)
221 3b8x_A WBDK, pyridoxamine 5-ph 99.6 2.8E-14 9.7E-19 128.5 17.8 204 46-273 117-389 (390)
222 2a7v_A Serine hydroxymethyltra 99.6 1.9E-14 6.5E-19 133.0 15.7 218 44-278 189-439 (490)
223 3ju7_A Putative PLP-dependent 99.5 4.8E-14 1.6E-18 126.7 13.2 216 46-278 115-373 (377)
224 1wyu_A Glycine dehydrogenase ( 99.5 5.8E-13 2E-17 121.9 19.6 199 59-277 195-437 (438)
225 3jzl_A Putative cystathionine 99.5 2.6E-13 8.7E-18 123.0 15.5 181 45-242 147-339 (409)
226 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 6.5E-13 2.2E-17 119.4 17.8 232 46-286 201-466 (501)
227 1c4k_A Protein (ornithine deca 99.5 2E-13 6.8E-18 131.7 15.4 230 46-282 255-567 (730)
228 2vyc_A Biodegradative arginine 99.5 2.3E-13 7.9E-18 132.1 15.9 229 46-281 291-605 (755)
229 3e77_A Phosphoserine aminotran 99.5 2E-13 6.9E-18 122.0 13.0 209 47-278 142-373 (377)
230 3i16_A Aluminum resistance pro 99.5 6.9E-13 2.4E-17 120.6 14.9 178 45-242 162-356 (427)
231 3qm2_A Phosphoserine aminotran 99.5 5.5E-14 1.9E-18 126.3 6.4 209 46-278 155-383 (386)
232 3hvy_A Cystathionine beta-lyas 99.5 1.2E-12 4.2E-17 119.0 15.3 177 45-241 162-355 (427)
233 3bc8_A O-phosphoseryl-tRNA(SEC 99.4 1.5E-11 5.3E-16 111.4 16.9 263 7-283 148-445 (450)
234 3m5u_A Phosphoserine aminotran 99.4 5.4E-12 1.9E-16 112.3 13.4 198 59-278 139-358 (361)
235 3n75_A LDC, lysine decarboxyla 99.3 5.7E-11 2E-15 113.9 19.4 228 46-282 281-561 (715)
236 3ou5_A Serine hydroxymethyltra 98.9 1.1E-07 3.8E-12 85.3 17.0 214 46-278 191-439 (490)
237 1vhx_A Putative holliday junct 66.6 9.2 0.00031 28.7 5.0 58 45-104 42-101 (150)
238 3v7e_A Ribosome-associated pro 62.1 26 0.00088 23.1 6.1 48 47-104 16-63 (82)
239 3j21_Z 50S ribosomal protein L 49.2 37 0.0013 23.1 5.3 43 47-99 20-62 (99)
240 1tks_A 3,4-dihydroxy-2-butanon 46.6 45 0.0015 26.3 6.0 43 53-99 152-194 (204)
241 1w41_A 50S ribosomal protein L 46.1 40 0.0014 23.0 5.1 43 47-99 21-63 (101)
242 3bzy_B ESCU; auto cleavage pro 45.6 13 0.00046 24.7 2.4 24 81-104 27-50 (83)
243 3pzt_A Endoglucanase; alpha/be 44.6 62 0.0021 27.4 7.2 53 46-101 70-125 (327)
244 1iv0_A Hypothetical protein; r 44.0 34 0.0012 23.4 4.4 56 46-104 39-96 (98)
245 4gqr_A Pancreatic alpha-amylas 41.1 18 0.00063 32.3 3.5 28 77-104 73-100 (496)
246 3cpq_A 50S ribosomal protein L 40.3 55 0.0019 22.8 5.2 42 47-98 26-67 (110)
247 1x7f_A Outer surface protein; 40.0 19 0.00067 31.5 3.2 26 79-104 72-97 (385)
248 2vt1_B Surface presentation of 39.0 19 0.00066 24.5 2.4 24 81-104 27-50 (93)
249 3on1_A BH2414 protein; structu 38.8 60 0.002 22.1 5.1 44 47-100 23-66 (101)
250 3t7y_A YOP proteins translocat 38.2 18 0.00062 24.8 2.2 24 81-104 42-65 (97)
251 2lbw_A H/ACA ribonucleoprotein 37.8 71 0.0024 22.7 5.5 48 47-103 25-72 (121)
252 1uta_A FTSN, MSGA, cell divisi 37.7 38 0.0013 22.0 3.7 48 228-275 20-68 (81)
253 1k7c_A Rhamnogalacturonan acet 37.5 87 0.003 24.7 6.7 50 49-98 113-167 (233)
254 3ghf_A Septum site-determining 36.8 1.1E+02 0.0036 21.7 6.3 51 40-98 20-78 (120)
255 3c01_E Surface presentation of 36.4 20 0.00069 24.7 2.2 24 81-104 27-50 (98)
256 3v7q_A Probable ribosomal prot 36.4 76 0.0026 21.6 5.3 45 47-101 24-68 (101)
257 3dc7_A Putative uncharacterize 36.3 63 0.0021 25.2 5.7 19 80-98 160-178 (232)
258 3p8k_A Hydrolase, carbon-nitro 36.3 56 0.0019 26.9 5.5 53 47-99 39-100 (281)
259 1g57_A DHBP synthase, 3,4-dihy 35.2 46 0.0016 26.5 4.4 37 58-99 165-201 (217)
260 1x60_A Sporulation-specific N- 35.2 77 0.0026 20.2 5.0 47 228-275 20-68 (79)
261 3u5e_c L32, RP73, YL38, 60S ri 34.6 85 0.0029 21.6 5.4 42 47-98 27-68 (105)
262 2aif_A Ribosomal protein L7A; 34.6 1.3E+02 0.0044 21.8 6.6 45 47-100 46-90 (135)
263 4a18_G RPL30; ribosome, eukary 33.4 1E+02 0.0035 21.1 5.6 43 47-99 27-69 (104)
264 1g94_A Alpha-amylase; beta-alp 32.9 29 0.001 30.9 3.4 27 78-104 62-88 (448)
265 3o63_A Probable thiamine-phosp 32.9 33 0.0011 27.9 3.4 51 47-101 46-103 (243)
266 4h08_A Putative hydrolase; GDS 32.5 88 0.003 23.7 5.8 44 55-98 106-157 (200)
267 2ale_A SNU13, NHP2/L7AE family 31.8 89 0.003 22.7 5.3 46 47-101 37-82 (134)
268 2q0q_A ARYL esterase; SGNH hyd 31.2 51 0.0017 25.3 4.2 18 81-98 163-180 (216)
269 1snn_A DHBP synthase, 3,4-dihy 31.1 1.3E+02 0.0045 24.1 6.5 48 47-99 165-212 (227)
270 3mio_A DHBP synthase, 3,4-dihy 31.1 1.4E+02 0.0049 23.5 6.6 41 54-99 152-194 (206)
271 1ht6_A AMY1, alpha-amylase iso 30.7 35 0.0012 29.9 3.5 27 78-104 66-92 (405)
272 3vup_A Beta-1,4-mannanase; TIM 30.4 36 0.0012 28.2 3.4 22 81-102 90-111 (351)
273 3nl6_A Thiamine biosynthetic b 30.4 69 0.0024 29.5 5.4 49 47-101 28-76 (540)
274 7a3h_A Endoglucanase; hydrolas 30.2 34 0.0012 28.6 3.2 54 46-102 45-101 (303)
275 1lwj_A 4-alpha-glucanotransfer 29.9 38 0.0013 30.1 3.5 60 45-104 20-93 (441)
276 1ud2_A Amylase, alpha-amylase; 29.6 37 0.0013 30.5 3.5 59 46-104 21-104 (480)
277 3bh4_A Alpha-amylase; calcium, 29.3 37 0.0013 30.5 3.5 59 46-104 19-102 (483)
278 1tvn_A Cellulase, endoglucanas 29.2 39 0.0013 27.9 3.4 21 81-101 79-99 (293)
279 1mxg_A Alpha amylase; hyperthe 29.1 38 0.0013 30.0 3.5 26 79-104 85-110 (435)
280 1hvx_A Alpha-amylase; hydrolas 28.9 38 0.0013 30.8 3.5 59 46-104 22-105 (515)
281 2l42_A DNA-binding protein RAP 28.9 40 0.0014 23.2 2.6 49 45-98 30-88 (106)
282 1nu0_A Hypothetical protein YQ 28.5 85 0.0029 22.9 4.7 58 45-104 40-99 (138)
283 1wpc_A Glucan 1,4-alpha-maltoh 28.4 40 0.0014 30.3 3.5 59 46-104 23-106 (485)
284 3ivz_A Nitrilase; alpha-beta s 28.2 57 0.0019 26.4 4.1 53 47-99 20-85 (262)
285 3dci_A Arylesterase; SGNH_hydr 28.0 79 0.0027 24.8 4.9 40 59-98 146-194 (232)
286 3m0z_A Putative aldolase; MCSG 27.8 51 0.0017 26.5 3.5 48 229-277 199-248 (249)
287 1bqc_A Protein (beta-mannanase 27.8 43 0.0015 27.8 3.4 23 79-101 63-85 (302)
288 4hty_A Cellulase; (alpha/beta) 27.5 43 0.0015 28.8 3.4 22 80-101 120-141 (359)
289 1egz_A Endoglucanase Z, EGZ, C 27.3 45 0.0015 27.5 3.4 21 81-101 77-97 (291)
290 3iz5_f 60S ribosomal protein L 26.8 1.2E+02 0.0041 21.2 5.1 44 47-100 31-74 (112)
291 3dhu_A Alpha-amylase; structur 26.8 48 0.0016 29.4 3.6 60 45-104 27-107 (449)
292 2guy_A Alpha-amylase A; (beta- 26.7 44 0.0015 29.9 3.5 60 45-104 40-121 (478)
293 2p0o_A Hypothetical protein DU 26.7 19 0.00066 31.3 1.0 25 80-104 49-73 (372)
294 2whl_A Beta-mannanase, baman5; 26.6 43 0.0015 27.7 3.2 23 79-101 62-84 (294)
295 1jae_A Alpha-amylase; glycosid 26.6 38 0.0013 30.4 2.9 59 46-104 20-98 (471)
296 2z1k_A (NEO)pullulanase; hydro 26.5 45 0.0015 29.8 3.5 61 44-104 46-120 (475)
297 3bzw_A Putative lipase; protei 26.4 1.2E+02 0.0041 24.4 5.9 51 48-98 148-214 (274)
298 1gcy_A Glucan 1,4-alpha-maltot 26.2 45 0.0016 30.4 3.5 60 45-104 33-116 (527)
299 4aie_A Glucan 1,6-alpha-glucos 26.0 45 0.0016 30.3 3.5 60 45-104 29-103 (549)
300 4ggi_A UDP-2,3-diacylglucosami 25.8 1E+02 0.0034 25.6 5.3 50 39-98 224-275 (283)
301 2xzm_U Ribosomal protein L7AE 25.8 1.2E+02 0.0042 21.6 5.1 46 47-101 29-74 (126)
302 2zxd_A Alpha-L-fucosidase, put 25.8 1.7E+02 0.0059 26.1 7.1 54 46-99 106-170 (455)
303 1wza_A Alpha-amylase A; hydrol 25.8 48 0.0017 29.8 3.5 60 45-104 24-105 (488)
304 2cks_A Endoglucanase E-5; carb 25.7 45 0.0016 27.8 3.2 53 46-101 44-100 (306)
305 3b1s_B Flagellar biosynthetic 31.6 15 0.0005 24.8 0.0 22 83-104 29-50 (87)
306 2hsj_A Putative platelet activ 25.5 94 0.0032 23.7 4.9 43 56-98 120-173 (214)
307 3cg6_A Growth arrest and DNA-d 25.2 1.3E+02 0.0044 22.3 5.0 54 49-104 32-87 (146)
308 2aaa_A Alpha-amylase; glycosid 25.2 46 0.0016 29.9 3.2 60 45-104 40-121 (484)
309 1g01_A Endoglucanase; alpha/be 25.2 50 0.0017 28.4 3.4 55 46-103 55-112 (364)
310 1ua7_A Alpha-amylase; beta-alp 25.1 39 0.0013 29.8 2.7 26 79-104 73-98 (422)
311 3jug_A Beta-mannanase; TIM-bar 25.0 48 0.0016 28.5 3.2 24 79-102 85-108 (345)
312 2jli_A YSCU, YOP proteins tran 24.5 41 0.0014 24.2 2.2 24 81-104 71-94 (123)
313 1qnr_A Endo-1,4-B-D-mannanase; 24.5 49 0.0017 27.9 3.2 23 80-102 89-111 (344)
314 3rjt_A Lipolytic protein G-D-S 24.4 93 0.0032 23.5 4.7 39 60-98 130-172 (216)
315 3m6y_A 4-hydroxy-2-oxoglutarat 24.3 57 0.0019 26.6 3.2 47 229-278 222-272 (275)
316 3n9k_A Glucan 1,3-beta-glucosi 24.1 54 0.0018 28.8 3.4 23 79-101 111-133 (399)
317 3dmy_A Protein FDRA; predicted 24.0 1.1E+02 0.0039 27.5 5.5 45 47-102 50-94 (480)
318 1rlg_A 50S ribosomal protein L 23.9 85 0.0029 22.1 3.9 48 47-103 32-79 (119)
319 1ivn_A Thioesterase I; hydrola 23.5 86 0.0029 23.4 4.2 38 60-98 99-137 (190)
320 3bzs_A ESCU; auto cleavage pro 23.3 44 0.0015 24.5 2.2 24 81-104 81-104 (137)
321 1h1y_A D-ribulose-5-phosphate 23.2 1.4E+02 0.0047 23.6 5.5 11 96-106 141-151 (228)
322 3dgp_A RNA polymerase II trans 23.2 1.1E+02 0.0038 20.0 3.9 28 78-105 30-57 (80)
323 3ff4_A Uncharacterized protein 22.7 75 0.0026 22.6 3.4 16 84-99 95-110 (122)
324 3hp4_A GDSL-esterase; psychrot 22.7 1.3E+02 0.0045 22.1 5.1 19 80-98 123-141 (185)
325 2dh2_A 4F2 cell-surface antige 22.5 65 0.0022 28.4 3.6 60 45-104 33-105 (424)
326 1ute_A Protein (II purple acid 22.4 2.1E+02 0.007 23.1 6.7 50 47-97 166-216 (313)
327 2c0h_A Mannan endo-1,4-beta-ma 22.3 61 0.0021 27.4 3.4 21 81-101 91-111 (353)
328 1h1n_A Endo type cellulase ENG 22.2 63 0.0022 26.9 3.4 23 81-103 72-94 (305)
329 1h4p_A Glucan 1,3-beta-glucosi 22.2 61 0.0021 28.5 3.4 25 79-103 112-136 (408)
330 3mfq_A TROA, high-affinity zin 22.1 68 0.0023 26.6 3.5 14 83-96 227-240 (282)
331 1j0h_A Neopullulanase; beta-al 22.0 61 0.0021 30.1 3.5 61 45-105 173-247 (588)
332 3ovp_A Ribulose-phosphate 3-ep 21.9 64 0.0022 25.8 3.2 12 46-57 100-111 (228)
333 1xbi_A 50S ribosomal protein L 21.9 73 0.0025 22.6 3.1 47 47-102 34-80 (120)
334 1wzl_A Alpha-amylase II; pullu 21.8 57 0.0019 30.2 3.2 60 45-104 170-243 (585)
335 2jlj_A YSCU, YOP proteins tran 21.8 49 0.0017 24.5 2.2 24 81-104 80-103 (144)
336 2wc7_A Alpha amylase, catalyti 21.7 49 0.0017 29.8 2.7 61 44-104 52-126 (488)
337 2ze0_A Alpha-glucosidase; TIM 21.3 68 0.0023 29.4 3.6 60 45-104 28-102 (555)
338 3bc9_A AMYB, alpha amylase, ca 21.2 64 0.0022 30.0 3.5 58 47-104 149-232 (599)
339 3edf_A FSPCMD, cyclomaltodextr 21.2 64 0.0022 30.0 3.5 60 45-104 145-222 (601)
340 1k4i_A 3,4-dihydroxy-2-butanon 21.1 1.9E+02 0.0066 23.2 5.7 43 53-99 160-212 (233)
341 2dvt_A Thermophilic reversible 21.0 1.4E+02 0.0048 24.7 5.4 52 47-100 110-164 (327)
342 1ece_A Endocellulase E1; glyco 20.9 68 0.0023 27.2 3.4 24 80-103 94-117 (358)
343 1m53_A Isomaltulose synthase; 20.8 67 0.0023 29.6 3.5 60 45-104 42-116 (570)
344 1ceo_A Cellulase CELC; glycosy 20.7 69 0.0024 27.0 3.4 24 80-103 68-91 (343)
345 3qr3_A Endoglucanase EG-II; TI 20.7 70 0.0024 27.3 3.4 58 47-104 45-107 (340)
346 3m07_A Putative alpha amylase; 20.6 76 0.0026 29.7 3.8 62 45-106 151-228 (618)
347 2fc3_A 50S ribosomal protein L 20.6 85 0.0029 22.3 3.3 47 47-102 33-79 (124)
348 4aef_A Neopullulanase (alpha-a 20.6 66 0.0023 30.2 3.5 60 45-104 236-309 (645)
349 1zja_A Trehalulose synthase; s 20.6 68 0.0023 29.5 3.5 60 45-104 29-103 (557)
350 2dn5_A General transcription f 20.4 1.5E+02 0.0051 19.8 4.1 33 39-72 52-87 (89)
351 3gdm_A Orotidine 5'-phosphate 20.3 2E+02 0.0068 23.6 5.9 63 40-107 34-98 (267)
352 1to3_A Putative aldolase YIHT; 20.3 69 0.0024 27.0 3.2 21 80-100 141-161 (304)
353 1uok_A Oligo-1,6-glucosidase; 20.2 70 0.0024 29.4 3.5 60 45-104 28-102 (558)
354 3nco_A Endoglucanase fncel5A; 20.1 74 0.0025 26.6 3.4 23 80-102 81-103 (320)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=3.7e-44 Score=329.08 Aligned_cols=278 Identities=30% Similarity=0.579 Sum_probs=244.6
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC-----------CHHHHHHHHHh-----cCCcEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG-----------DITALEKIFKE-----SGDQIAGF 64 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------d~~~le~~i~~-----~~~~~~~v 64 (306)
|++||.|+|+|||++.++++++++. .++..+.|..+++..+|++ +.+.+++.++. +++++++|
T Consensus 151 r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAv 230 (456)
T 4atq_A 151 RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAI 230 (456)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEE
Confidence 6899999999999999999998864 4567777888887666654 34444444432 24679999
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeC
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLAD 144 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~ 144 (306)
++||+++.+|.+.++++||++|+++|++||++||+||+++||||+|..|+++++++.||+++++|+++||+ ++|.++++
T Consensus 231 ivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~-P~~av~~~ 309 (456)
T 4atq_A 231 IIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGL-PLSAITGR 309 (456)
T ss_dssp EECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-SCEEEEEE
T ss_pred EeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcC-CceeeEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC----CceeeEEEeeeEEEE
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFP----NYVKEVRGRGLFNAV 220 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~----~~~~~~~~~g~~~~i 220 (306)
+++++.+.+..+++||.+|++++++++++++.+.++++.++.++..++++++|+++...++ +.+.++++.|+++.+
T Consensus 310 ~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~gi 389 (456)
T 4atq_A 310 ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAI 389 (456)
T ss_dssp HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEE
T ss_pred HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999987763 467889999999999
Q ss_pred EEecCC----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 221 EFDKTA----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 221 ~~~~~~----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++..+. .......+.+.|+++|+++.+.+ .+.|||+|++.+|++++++++++|+++++ ..
T Consensus 390 el~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~-a~ 455 (456)
T 4atq_A 390 ELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIK-AH 455 (456)
T ss_dssp EEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred EEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-hh
Confidence 986532 12335678999999999988754 57899999999999999999999999997 53
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=5.8e-43 Score=322.30 Aligned_cols=275 Identities=29% Similarity=0.481 Sum_probs=239.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhc-CCcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~-~~~~~ 62 (306)
+++||+|+|+|||.|.+++++++++ +...+.+..+++..++.++ .+++++.+.+. +++++
T Consensus 160 r~~ii~~~~~yHG~t~~a~s~tg~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iA 238 (473)
T 4e3q_A 160 KRKILTRWNAYHGVTAVSASMTGKP-YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIA 238 (473)
T ss_dssp CCEEEEETTCCCCSSHHHHHHSCCG-GGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred cceEEEeeceECCCccccccccccc-cccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceE
Confidence 5789999999999999999999965 4556667777776655542 35666776653 36799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL 142 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~ 142 (306)
+|++||+++.+|.++++++||++|+++|++||++||+||+++||||+|..|+++++++.||+++++|+++||+.|+|.++
T Consensus 239 avi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~ 318 (473)
T 4e3q_A 239 GFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVI 318 (473)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEE
T ss_pred EEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998844999999
Q ss_pred eCHHHHhhc-------CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCI-------QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+ ....|++||++|++++++++++++.+.++++.++++++.++++++|+++... +.+..+++.|
T Consensus 319 ~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~--~~v~~vRG~G 396 (473)
T 4e3q_A 319 LGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAER--PNIGEYRGIG 396 (473)
T ss_dssp ECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTS--TTEEEEEEET
T ss_pred ccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcC--CCeeEEeecc
Confidence 999998766 3457899999999999999999999999999999999999999999998654 3678999999
Q ss_pred eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++.+++..+.. ......+.+.|+++|+++.+.+ +.+|++|++.+|++++++++++|+++++ ++
T Consensus 397 l~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~i~l~PPL~it~~eid~~~~~l~~al~-~v 468 (473)
T 4e3q_A 397 FMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-QSVVLCPPFILTEAQMDEMFDKLEKALD-KV 468 (473)
T ss_dssp TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred eEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 999999864321 1225678999999999999874 6899999999999999999999999998 64
No 3
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=5.9e-41 Score=311.41 Aligned_cols=277 Identities=25% Similarity=0.436 Sum_probs=242.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC----------------HHHHHHHHHhcC-CcEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD----------------ITALEKIFKESG-DQIAGF 64 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----------------~~~le~~i~~~~-~~~~~v 64 (306)
+.+||+++++|||.+.+++++++.+.++..+.|..+++.+++++. +++||+++++.+ +++++|
T Consensus 146 ~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aav 225 (476)
T 3i5t_A 146 KKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAF 225 (476)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred CCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999999999999999999998888888888877776655432 889999998643 579999
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-cCCCCCcEEEecccccCC-cccceeeE
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRPDMVILGKALGGG-VIPVSAVL 142 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-~~~~~~d~~s~sK~~~~G-~~~~g~~~ 142 (306)
++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++ .+++.||++++||++++| + |+|+++
T Consensus 226 i~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~-plg~v~ 304 (476)
T 3i5t_A 226 LAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYV-PLGGLA 304 (476)
T ss_dssp EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSS-CCEEEE
T ss_pred EECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCc-CeEEEE
Confidence 9999999999999999999999999999999999999999999999887788 899999999999999999 7 999999
Q ss_pred eCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 143 ADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 143 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
+++++++.+.+. .+..+|++|+++++++.++++.+.++++.++++++.+++++.|+.+. .+ +.+..+++.|
T Consensus 305 ~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~-~~v~~v~~~G 382 (476)
T 3i5t_A 305 ISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR-DL-PGVAETRSVG 382 (476)
T ss_dssp ECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT-TS-TTEEEEEEET
T ss_pred ECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cC-CCeEEEEecC
Confidence 999999988753 56789999999999999999999888899999999999999999653 44 3677899999
Q ss_pred eEEEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 216 LFNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 216 ~~~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++++++...... .....+++.|+++||++.+.+ +++|++|++.++++++++++++|+++++ ++.+
T Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~-~~~~ 456 (476)
T 3i5t_A 383 LVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQIDEMVAIMRQAIT-EVSA 456 (476)
T ss_dssp TEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred ceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence 9999988753100 025678999999999999976 8999999999999999999999999998 7654
No 4
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=6.5e-41 Score=306.37 Aligned_cols=265 Identities=22% Similarity=0.313 Sum_probs=231.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
|+|||.|+|+|||++..+.+...+.. ...++..+||||++.+++.++++++++++|++||+++++|.++++++
T Consensus 169 r~~ii~~~~~yHG~t~~~~~~~~~~~-------~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~ 241 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGVLGFGARPSPTT-------VPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPD 241 (454)
T ss_dssp CCEEEEETTCBCSTTCBBSSSBCTTS-------CCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHH
T ss_pred CCeEEEEeCCcCCccccccccccCcc-------CCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchh
Confidence 68999999999999988776665422 22345788999999999999998889999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC----Ccc
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG----EHG 157 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~----~~~ 157 (306)
||++|+++|++||++||+||+++| |.|..+..+++++.||+++++|+++||+ ++|.+.+++++++.+.+. .++
T Consensus 242 fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv~PDi~t~gK~lggG~-Piga~~~~~ei~~~~~~~~~~~~h~ 318 (454)
T 4ao9_A 242 FLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGIRSDLTTLGKYIGGGM-SFGAFGGRADVMALFDPRTGPLAHS 318 (454)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHGGGCTTTCSCCCC
T ss_pred hHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCCCCcEEEeccccCCCC-cceeeeeHHHHHHHHhhccCCcccc
Confidence 999999999999999999999994 8999888899999999999999999999 999999999999988753 578
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----------C
Q 021893 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----------L 227 (306)
Q Consensus 158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----------~ 227 (306)
+||++|++++++++++|+.+.++++.++++++.++++++|+++...++ .+..+++.|+++.+.+.+.+ .
T Consensus 319 ~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d 397 (454)
T 4ao9_A 319 GTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEG-VAMQFTGIGSLMNAHFVQGDVRSSEDLAAVD 397 (454)
T ss_dssp CTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHT-BSCEEEEETTEEEEESCCSCCCSGGGGTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCC-CCEEEeeeceEEEEEEecCCCCCHHHHHhhh
Confidence 899999999999999999998888999999999999999999987764 78899999999999875432 1
Q ss_pred hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
......+...|+++||++.|.+ .+ .++..+|++|||+++++|++++. ++.
T Consensus 398 ~~~~~~~~~~ll~~Gv~~~p~~--~~--~~s~~~T~~dId~~l~al~~~l~-~~~ 447 (454)
T 4ao9_A 398 GRLRQLLFFHLLNEDIYSSPRG--FV--VLSLPLTDADIDRYVAAIGSFIG-GHG 447 (454)
T ss_dssp HHHHHHHHHHHHHTTEECCTTC--EE--ECCTTCCHHHHHHHHHHHHHHHH-HSG
T ss_pred HHHHHHHHHHHHHCCEEEcCCC--CE--EEeCCCCHHHHHHHHHHHHHHHH-hcc
Confidence 1224467888999999998853 33 45567899999999999999999 654
No 5
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=9.5e-40 Score=301.54 Aligned_cols=275 Identities=32% Similarity=0.608 Sum_probs=241.6
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC------------------CHHHHHHHHHh--cCCc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG------------------DITALEKIFKE--SGDQ 60 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------------d~~~le~~i~~--~~~~ 60 (306)
+.+||+++++|||.+.+++++++.. .++..+.|..+++..+|++ +++.+++.+++ .+++
T Consensus 148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 227 (451)
T 3oks_A 148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN 227 (451)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence 4789999999999999999998864 6777787887888777776 24445555553 2357
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccccee
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSA 140 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~ 140 (306)
+++|++||+++++|.+.+++++|++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++|+ |+||
T Consensus 228 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~iG~ 306 (451)
T 3oks_A 228 LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGGL-PLSA 306 (451)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTS-SCEE
T ss_pred EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCCc-ceEE
Confidence 999999999999999999999999999999999999999999999999998887888999999999999999999 9999
Q ss_pred eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
+++++++++.+.+..+..+++.|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++
T Consensus 307 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~G~~~~~ 385 (451)
T 3oks_A 307 VTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDD-RIGDVRGRGAMIAM 385 (451)
T ss_dssp EEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEE
T ss_pred EEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEEeeEEEEE
Confidence 99999999999888888999999999999999999988888999999999999999999877774 67788999999999
Q ss_pred EEecC----CChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 221 EFDKT----ALPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 221 ~~~~~----~~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+... +.......+++.|+++||++.|++. +++|++|++.++++++++++++|+++++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 386 ELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp EEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 88431 1234577899999999999998654 8999999999999999999999999987
No 6
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=2.4e-40 Score=306.90 Aligned_cols=274 Identities=26% Similarity=0.492 Sum_probs=237.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC-CcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~-~~~~~ 63 (306)
+.+||+++++|||.+.+++++++.+.++..+. ..+++..++.+. +++||++|++.+ +++++
T Consensus 148 ~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aa 226 (472)
T 3hmu_A 148 KTVIISRKNAYHGSTVASSALGGMAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAA 226 (472)
T ss_dssp CCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred CCEEEEEcCcCCCccHHhhhccCChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 56899999999999999999999887777777 556665555332 889999998643 57999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeE
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVL 142 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~ 142 (306)
|++||+++++|.+++++++|++|+++|++||++||+||+|+|||+.|..+.++.+++.||++++||+++|| + |+|+++
T Consensus 227 vi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~-plG~v~ 305 (472)
T 3hmu_A 227 FIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYA-PIGGSI 305 (472)
T ss_dssp EEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSS-CCEEEE
T ss_pred EEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCc-ceEEEE
Confidence 99999999999999999999999999999999999999999999999877788889999999999999976 7 999999
Q ss_pred eCHHHHhhcCC--CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 143 ADKEVMLCIQP--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 143 ~~~~~~~~~~~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
+++++++.+.. ..+..+|++|+++++++.++++.+.++++.++++ ++.+++++.|+++. .++ .+..+++.|++++
T Consensus 306 ~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~-~v~~vr~~G~~~~ 383 (472)
T 3hmu_A 306 VCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT-DHP-LVGEAKIVGMMAS 383 (472)
T ss_dssp EEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG-GST-TEEEEEEETTEEE
T ss_pred ECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCC-CeEEEEecCceEE
Confidence 99999998842 3577789999999999999999998888999999 99999999997764 343 6778999999999
Q ss_pred EEEecCCC---------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 220 VEFDKTAL---------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 220 i~~~~~~~---------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+..+.. ......+++.|+++||++.+.+ +++|++|++..+++++++++++|+++++ ++
T Consensus 384 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~-~~ 452 (472)
T 3hmu_A 384 IALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEIDEMFVRIRKSLD-EA 452 (472)
T ss_dssp EEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred EEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 98864210 1126688999999999999986 8999999999999999999999999987 54
No 7
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=7.3e-40 Score=302.08 Aligned_cols=278 Identities=28% Similarity=0.571 Sum_probs=218.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC----------------HHHHHHHHHhcCCcEEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD----------------ITALEKIFKESGDQIAGFL 65 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----------------~~~le~~i~~~~~~~~~v~ 65 (306)
+.+||+++++|||.+..++++++...+...+.|..+++..+|+++ +++||++|+++++++++|+
T Consensus 136 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 215 (448)
T 3dod_A 136 KQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALS 215 (448)
T ss_dssp CCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEE
Confidence 589999999999999999999987777777777777777776654 8999999986556899999
Q ss_pred Ecccc-CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeC
Q 021893 66 FEPIQ-GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLAD 144 (306)
Q Consensus 66 v~~~~-~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~ 144 (306)
+||++ +++|.+++++++|++|+++|++||++||+||+|+||++.|..+..+.+++.+|++++||++++|+.|+|+++++
T Consensus 216 ~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~ 295 (448)
T 3dod_A 216 IESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFAT 295 (448)
T ss_dssp EESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEE
T ss_pred EeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEEC
Confidence 99998 99999999999999999999999999999999999999998877888899999999999999993399999999
Q ss_pred HHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 145 KEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 145 ~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
+++++.+.. ..+..+++.++++++++.++++.+.++++.++++++.+++++.|++ ...++ .+..+++.|.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~-~~~~~~~~g~~ 373 (448)
T 3dod_A 296 EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALP-HVGDIRQLGFM 373 (448)
T ss_dssp HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTST-TEEEEEEETTE
T ss_pred HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCC-CeEEEEeeeEE
Confidence 999999876 5677889999999999999999988888999999999999999999 55553 66778899999
Q ss_pred EEEEEecCCChh--------hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 218 NAVEFDKTALPV--------SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 218 ~~i~~~~~~~~~--------~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++.+....... ...++++.|+++||.+.|.+ +++|++|++.++++++++++++|+++++ ++.+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~~ 445 (448)
T 3dod_A 374 CGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEELSEMVAIMKQAIH-EVTS 445 (448)
T ss_dssp EEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHT
T ss_pred EEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHhc
Confidence 999887532100 14689999999999999975 8999999999999999999999999998 7643
No 8
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.1e-39 Score=301.18 Aligned_cols=277 Identities=32% Similarity=0.585 Sum_probs=241.0
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC----C-------------HHHHHHHHHhcCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----D-------------ITALEKIFKESGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----d-------------~~~le~~i~~~~~~~~~ 63 (306)
+.+||+++++|||.+.+++++++.. .++..+.|..+++..+|++ | ++.|++.+. ++++++
T Consensus 151 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~--~~~~aa 228 (453)
T 4ffc_A 151 RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIG--AQSLAA 228 (453)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC--GGGEEE
T ss_pred CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcC--CCCEEE
Confidence 4789999999999999999998864 6777777877777666665 4 244444443 257999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
|++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.+|+.++||++++|+ |+||+++
T Consensus 229 vi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G~-~~G~~~~ 307 (453)
T 4ffc_A 229 IIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGGM-PLSAVTG 307 (453)
T ss_dssp EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTS-SCEEEEE
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCCc-CeEEEEE
Confidence 999999999999999999999999999999999999999999999998777788899999999999999998 9999999
Q ss_pred CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
++++++.+.+..+..+++.|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.+.
T Consensus 308 ~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~ 386 (453)
T 4ffc_A 308 RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVD-IIGEVRGRGAMLAIEIV 386 (453)
T ss_dssp EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCS-SEEEEEEETTEEEEEEB
T ss_pred CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeeceEEEEEEe
Confidence 99999999888888999999999999999999988788999999999999999999877774 67788899999999885
Q ss_pred cC----CChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 224 KT----ALPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 224 ~~----~~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.. +.......+++.|+++||++.|++. +++|++|++.++++++++++++|+++++ ++.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~~ 451 (453)
T 4ffc_A 387 KPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIR-AKAS 451 (453)
T ss_dssp CTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHC-
T ss_pred cCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 31 1234577899999999999998654 8999999999999999999999999998 7643
No 9
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=3.6e-39 Score=297.75 Aligned_cols=274 Identities=30% Similarity=0.543 Sum_probs=238.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccc--------ccCCC---------HHHHHHHHH-hcCCcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLK--------VDFGD---------ITALEKIFK-ESGDQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~d---------~~~le~~i~-~~~~~~~~ 63 (306)
+.+||+++++|||.+..++++++.......+.|..+++.. ++++| +++||++++ .+++++++
T Consensus 139 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~ 218 (452)
T 3n5m_A 139 RYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAA 218 (452)
T ss_dssp CCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEE
T ss_pred CCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4689999999999999999999987777777776666433 34466 999999998 44467999
Q ss_pred EEEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceee
Q 021893 64 FLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAV 141 (306)
Q Consensus 64 v~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~ 141 (306)
|++||+ +| +|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.+|++++||++++| + |+|++
T Consensus 219 vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~-~ig~~ 296 (452)
T 3n5m_A 219 FIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYL-PLSAT 296 (452)
T ss_dssp EEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSS-CCEEE
T ss_pred EEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCc-ceEEE
Confidence 999999 89 99999999999999999999999999999999999999888788899999999999999999 7 99999
Q ss_pred EeCHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 142 LADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 142 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
++++++++.+.. ..+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|
T Consensus 297 ~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g 375 (452)
T 3n5m_A 297 AVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHP-LVGDIRGKG 375 (452)
T ss_dssp EEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEESS
T ss_pred EECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEEE
Confidence 999999998853 2467888999999999999999988888999999999999999999876664 677888999
Q ss_pred eEEEEEEecCCC------hhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 216 LFNAVEFDKTAL------PVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 216 ~~~~i~~~~~~~------~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++++.+..... .....++++.|+++||++.|.+ ++++||+|++.++++++++++++|+++++
T Consensus 376 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 376 LLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp SCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 999998854211 1224578999999999999875 68999999999999999999999999987
No 10
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=1.9e-39 Score=300.25 Aligned_cols=278 Identities=26% Similarity=0.457 Sum_probs=242.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC------CC------------HHHHHHHHHhcC-CcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF------GD------------ITALEKIFKESG-DQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d------------~~~le~~i~~~~-~~~~ 62 (306)
+.+||+++++|||.+.+++++++...++..+.+..+++..++. +| +++||++|++.+ ++++
T Consensus 144 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~a 223 (460)
T 3gju_A 144 KKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIA 223 (460)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred CCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999988777778777777655442 33 689999998543 5799
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceee
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAV 141 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~ 141 (306)
+|++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.||++++||++++| + |+|++
T Consensus 224 aii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~-~lg~v 302 (460)
T 3gju_A 224 AFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYA-PLSGV 302 (460)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSS-CCEEE
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCC-CeEEE
Confidence 999999999999999999999999999999999999999999999999877778889999999999999988 7 99999
Q ss_pred EeCHHHHhhc-------CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893 142 LADKEVMLCI-------QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR 214 (306)
Q Consensus 142 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 214 (306)
++++++++.+ ....+..+++.|+++++++.++++.+.++++.++++++.++++++|.+....++ .+..+++.
T Consensus 303 ~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~ 381 (460)
T 3gju_A 303 IVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHK-NVGEVRGD 381 (460)
T ss_dssp EEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEE
T ss_pred EECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEeee
Confidence 9999999888 445678899999999999999999988888999999999999999988776664 67788999
Q ss_pred eeEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 215 GLFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 215 g~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
|.++++.+..... .....++++.|+++||++.+.+ .+++||+|++..+++++++++++|+++++ ++.
T Consensus 382 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~ 457 (460)
T 3gju_A 382 GMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVK-SVF 457 (460)
T ss_dssp TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred eEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 9999998874321 1126688999999999999875 48999999999999999999999999998 653
No 11
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=4.7e-40 Score=303.85 Aligned_cols=274 Identities=29% Similarity=0.495 Sum_probs=233.5
Q ss_pred cceEEEEecCCCCcccchhcccC-CccccccCCCCCCCcccccC-------CCHHHHHHHHHhcCCcEEEEEEcc-ccCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSC-DNEAIRGFGPLLPGHLKVDF-------GDITALEKIFKESGDQIAGFLFEP-IQGE 72 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~~~~~~~~v~v~~-~~~~ 72 (306)
+.+||+++++|||.+.+++++++ ...+...+.|..+++..++. +|+++||++|+++++++++|++|| ++++
T Consensus 167 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~ 246 (457)
T 3tfu_A 167 KRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGA 246 (457)
T ss_dssp CCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECT
T ss_pred CceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCC
Confidence 35899999999999999999865 45566677777777666665 489999999997667899999999 9999
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcC
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 152 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~ 152 (306)
+|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.||++|+||+++||+.|+|++++++++++.+.
T Consensus 247 ~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~ 326 (457)
T 3tfu_A 247 GGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTIS 326 (457)
T ss_dssp TTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhh
Confidence 99999999999999999999999999999999999999988888889999999999999988439999999999998883
Q ss_pred ---CC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC
Q 021893 153 ---PG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 227 (306)
Q Consensus 153 ---~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~ 227 (306)
.. .+..+|.+|+++++++.++++.+.++++.++++++.+++++.|+++. .++ .+..+++.|+++++.+.+
T Consensus 327 ~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~-~v~~vr~~G~~~~i~l~~--- 401 (457)
T 3tfu_A 327 AGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-ALP-AVTDVRVCGAIGVIECDR--- 401 (457)
T ss_dssp HSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-GST-TEEEEEECSSCEEEEESS---
T ss_pred ccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cCC-CeeeeecCCeEEEEEECC---
Confidence 33 67788999999999999999999888899999999999999999875 343 566888999999998875
Q ss_pred hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
..+..++++.|+++||++.|. .+++|++|++..+++++++++++|+++++ ++.
T Consensus 402 ~~~~~~~~~~l~~~Gv~v~~~-~~~lRi~p~~~~t~eei~~~l~~L~~~l~-~~~ 454 (457)
T 3tfu_A 402 PVDLAVATPAALDRGVWLRPF-RNLVYAMPPYICTPAEITQITSAMVEVAR-LVG 454 (457)
T ss_dssp CCCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHHHHH-HC-
T ss_pred cccHHHHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence 234778999999999999986 47999999999999999999999999998 764
No 12
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=2.5e-39 Score=297.21 Aligned_cols=273 Identities=45% Similarity=0.844 Sum_probs=220.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+++++|||.+..++.+++.......+.|..+++..+|++|+++||++++. +++++|+++|+++++|.+++++++
T Consensus 157 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~ 234 (433)
T 1z7d_A 157 AKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKD--PNVCAFIVEPIQGEAGVIVPSDNY 234 (433)
T ss_dssp CEEEEETTC--------------------------CEEEECTTCHHHHHHHHTS--TTEEEEEECSSBSTTTSBCCCTTH
T ss_pred CeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCC--CCEEEEEEECCCCCCCccCCCHHH
Confidence 789999999999998888777755555566677778888999999999999952 579999999999999988889999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
+++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++| + |+|++++++++++.+.+..+..+|.
T Consensus 235 l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~-~~G~v~~~~~~~~~l~~~~~~~t~~ 313 (433)
T 1z7d_A 235 LQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHY-PISAVLANDDIMLVIKPGEHGSTYG 313 (433)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSS-CCEEEEECHHHHTTCCTTCCCCTTT
T ss_pred HHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECccccCCCC-CeEEEEECHHHHhhhccccccccCC
Confidence 9999999999999999999999999999877778888899999999999999 7 9999999999999888777788899
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+|+++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|.++++.++... .+..++++.|+++
T Consensus 314 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~l~~~ 390 (433)
T 1z7d_A 314 GNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSK-IVRDVRGKGLLCAIEFKNEL--VNVLDICLKLKEN 390 (433)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEEETTEEEEEECTTT--CCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeeeeEEEEEEccCh--hHHHHHHHHHHHC
Confidence 99999999999999988778999999999999999998754553 45567889999999887421 2467899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
||.+.|.+.+++|++|++.++++++++++++|+++++ ++.
T Consensus 391 Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~ 430 (433)
T 1z7d_A 391 GLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVK-FFD 430 (433)
T ss_dssp TEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HHC
T ss_pred CeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH-HHH
Confidence 9999997788999999999999999999999999988 653
No 13
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.2e-39 Score=292.82 Aligned_cols=269 Identities=32% Similarity=0.596 Sum_probs=245.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||+++++|||.+..+..+++...+...+.|...++..++++|+++||++++ +++++|+++|+++++|.++++++
T Consensus 124 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~~G~~~~~~~ 200 (395)
T 3nx3_A 124 GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVN---EKTCAIILESVQGEGGINPANKD 200 (395)
T ss_dssp TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCC---TTEEEEEEESEECTTSCEECCHH
T ss_pred CCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhcc---CCeEEEEEeCccCCCCcccCCHH
Confidence 478999999999999999999988777888888888889999999999999997 57999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHH-HhhcCCCCccCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-MLCIQPGEHGSTF 160 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~~~~~~~ 160 (306)
++++|.++|++||++||+||+|+||++.|..+..+.+++.+|+.++||++++|+ |+|++++++++ ++.+.+..+..++
T Consensus 201 ~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~-~~G~~~~~~~~~~~~~~~~~~~~~~ 279 (395)
T 3nx3_A 201 FYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGL-SVGAFVINQKVASNSLEAGDHGSTY 279 (395)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTS-CCEEEEECHHHHHHHSCTTCCSSCB
T ss_pred HHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCC-ceEEEEEchhhhhhhcCCcccCCCC
Confidence 999999999999999999999999999988777788899999999999999999 99999999999 8888887778889
Q ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH
Q 021893 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~ 240 (306)
..++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.++. .....++++.|++
T Consensus 280 ~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~~~~~~l~~ 355 (395)
T 3nx3_A 280 GGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFD-FCKKRKGLGFMQGLSLDK---SVKVAKVIQKCQE 355 (395)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEECT---TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeEEEEEEEEeCC---cchHHHHHHHHHH
Confidence 999999999999999887778899999999999999999877664 566778899999998875 2357789999999
Q ss_pred CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+||.+.+++.+++|++|+...+++++++++++|+++++
T Consensus 356 ~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 356 NALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 99999998889999999999999999999999999987
No 14
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=5e-39 Score=295.72 Aligned_cols=269 Identities=51% Similarity=0.908 Sum_probs=238.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+++++|||.+..++.+++.+.+...+.|...++..+|++|+++||++++. +++++|+++|+++++|.+++++++
T Consensus 168 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~ 245 (439)
T 2oat_A 168 AKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD--PNVAAFMVEPIQGEAGVVVPDPGY 245 (439)
T ss_dssp CEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTS--TTEEEEEECSSBTTTTSBCCCTTH
T ss_pred CeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCC--CCEEEEEEECCCCCCCCcCCCHHH
Confidence 689999999999999888887766666777787788888999999999999962 579999999999999988899999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
+++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++| + |+|++++++++++.+.+..+..+|.
T Consensus 246 l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~-~~G~v~~~~~~~~~l~~~~~~~t~~ 324 (439)
T 2oat_A 246 LMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLY-PVSAVLCDDDIMLTIKPGEHGSTYG 324 (439)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSS-CCEEEEECHHHHTTSCTTSSCCSST
T ss_pred HHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEecccccCCCC-CeEEEEECHHHHhccCCCCcccCCC
Confidence 9999999999999999999999999999877778888999999999999999 7 9999999999999888777788999
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+|+++++++.++++.+.++++.++++++++++++.|+++. ++ .+..+++.|.++++.++... ..+..++++.|+++
T Consensus 325 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~--~~-~~~~~~~~g~~~~v~l~~~~-~~~~~~l~~~l~~~ 400 (439)
T 2oat_A 325 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP--SD-VVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN 400 (439)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSC--TT-TEEEEEEETTEEEEEECCCS-SCCHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc--CC-CcEEEEeeeeEEEEEEecCc-cHHHHHHHHHHHHC
Confidence 9999999999999998877889999999999999998862 32 45567888999999887421 13467899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
||.+.|.+++++|++|++.++++++++++++|+++++
T Consensus 401 Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 401 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp TEECCBSSSSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCEEEEECccCCCHHHHHHHHHHHHHHHH
Confidence 9999998789999999999999999999999999887
No 15
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=3e-39 Score=298.86 Aligned_cols=277 Identities=26% Similarity=0.444 Sum_probs=237.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC-CcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~-~~~~~ 63 (306)
+.+||+++++|||.+.+++++++...++..+.+..+++..++.+. +++||+++++.+ +++++
T Consensus 143 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~ 222 (459)
T 4a6r_A 143 KKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAA 222 (459)
T ss_dssp CCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred CCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999998877777878777776655332 889999998643 57999
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeE
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVL 142 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~ 142 (306)
|++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.||++++||++++| + |+|+++
T Consensus 223 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~-~lg~v~ 301 (459)
T 4a6r_A 223 FVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYL-PIGAVF 301 (459)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSS-CCEEEE
T ss_pred EEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCC-Ccccee
Confidence 99999999999999999999999999999999999999999999999877778889999999999999977 7 999999
Q ss_pred eCHHHHhhcC---CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 143 ADKEVMLCIQ---PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 143 ~~~~~~~~~~---~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
+++++++.+. ...+..+|+.|+++++++.++++.+.++++.++++ ++.+++++.|.+....++ .+..+++.|+++
T Consensus 302 ~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~g~~~ 380 (459)
T 4a6r_A 302 VGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFE-HVDDVRGVGMVQ 380 (459)
T ss_dssp ECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCT-TEEEEEEETTEE
T ss_pred eCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEEEEEE
Confidence 9999998886 55577788999999999999999988788999999 999999999944334443 677889999999
Q ss_pred EEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 219 AVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 219 ~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++.+..... .....++++.|+++||++.+.+ +++|++|++..+++++++++++|+++++ ++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~ 450 (459)
T 4a6r_A 381 AFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAERCLE-EFE 450 (459)
T ss_dssp EEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred EEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 998874210 1226789999999999999976 8999999999999999999999999998 653
No 16
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=1.6e-38 Score=292.21 Aligned_cols=278 Identities=28% Similarity=0.530 Sum_probs=236.3
Q ss_pred cceEEEEecCCCCcccchhcccCCcc--ccccCCCCCCCcccccCC----------CHHHHHHHHH-hcCCcEEEEEEcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNE--AIRGFGPLLPGHLKVDFG----------DITALEKIFK-ESGDQIAGFLFEP 68 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----------d~~~le~~i~-~~~~~~~~v~v~~ 68 (306)
+.+||+++++|||.+..++.+++... +...+.|..+++..+|++ |+++||++++ .+++++++|+++|
T Consensus 130 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p 209 (439)
T 3dxv_A 130 RSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEP 209 (439)
T ss_dssp CCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECS
T ss_pred CCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 46899999999999999998888654 666666666667777776 6999999994 3346799999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+++++|.+.++++++++|.++|++||++||+||+|+||++.|..+..+.+++.+|++|+||++++|+ |+||++++++++
T Consensus 210 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~-riG~~~~~~~~~ 288 (439)
T 3dxv_A 210 IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGL-PLSAVIAPAEIL 288 (439)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-CCEEEEEEHHHH
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCCc-ceEEEEECHHHH
Confidence 9999999999999999999999999999999999999988888777788899999999999999999 999999999999
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC---
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT--- 225 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~--- 225 (306)
+.+.+..+..++ .++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.+...
T Consensus 289 ~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 366 (439)
T 3dxv_A 289 DCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHP-LIGDIRGRGLACGMELVCDRQS 366 (439)
T ss_dssp TSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEEEEETTT
T ss_pred hhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEEEecCccc
Confidence 999887778888 99999999999999888788899999999999999999887764 6677888999999988421
Q ss_pred --CChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 226 --ALPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 226 --~~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+......++++.|+++||.+.+++. +++|++|++..+++++++++++|+++++ ++.+
T Consensus 367 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~~ 427 (439)
T 3dxv_A 367 REPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFS-ELSA 427 (439)
T ss_dssp TEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-TGGG
T ss_pred cCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHhc
Confidence 0134577899999999999998754 8999999999999999999999999999 7754
No 17
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=6.3e-38 Score=287.52 Aligned_cols=277 Identities=31% Similarity=0.539 Sum_probs=216.6
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCC--CcccccCCC--------HHHHHHHHHhcC-CcEEEEEEcccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP--GHLKVDFGD--------ITALEKIFKESG-DQIAGFLFEPIQ 70 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d--------~~~le~~i~~~~-~~~~~v~v~~~~ 70 (306)
+.+||+++++|||.+..+..+++.......+.|..+ ++..+|+++ +++||++|++++ +++++|+++|++
T Consensus 121 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~ 200 (430)
T 3i4j_A 121 RFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVV 200 (430)
T ss_dssp CCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSC
T ss_pred CcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 468999999999999998888887666677777777 777788764 499999998643 578999999999
Q ss_pred C-CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC-CCCCcEEEecccccCC-cccceeeEeCHHH
Q 021893 71 G-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-EVRPDMVILGKALGGG-VIPVSAVLADKEV 147 (306)
Q Consensus 71 ~-~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~-~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~ 147 (306)
+ ++|.++++++++++|.++|++||++||+||+|+||++.|..++++.+ ++.+|++++||++++| + |+||+++++++
T Consensus 201 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~-r~G~~~~~~~i 279 (430)
T 3i4j_A 201 GASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYA-PLAGLLAAPQV 279 (430)
T ss_dssp CGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSS-CCEEEEECHHH
T ss_pred cCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCcc-ccEEEEECHHH
Confidence 9 99999999999999999999999999999999999999987778888 8999999999999999 8 99999999999
Q ss_pred HhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 148 MLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 148 ~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
++.+... .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.+.
T Consensus 280 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~ 358 (430)
T 3i4j_A 280 YETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFP-QMMQVRGTGLLLGVVLG 358 (430)
T ss_dssp HHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEEC
T ss_pred HHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEEec
Confidence 9888653 567888999999999999999988788999999999999999999876764 66778889999999886
Q ss_pred cCCC------hhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 224 KTAL------PVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 224 ~~~~------~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+... .....++++.|+++||.+.|+ +++++|+++++..+++++++++++|+++++ ++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~ 428 (430)
T 3i4j_A 359 DLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALE-DV 428 (430)
T ss_dssp ------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred cccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 3110 122467999999999999986 367999999999999999999999999998 64
No 18
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=4.9e-38 Score=287.58 Aligned_cols=272 Identities=33% Similarity=0.587 Sum_probs=233.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+++++|||.+..++.+++.......+.|..+++..+|++|+++||++++ +++++|+++|+++++|.++++.++
T Consensus 147 ~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~---~~~~~vi~~p~~~~gG~~~~~~~~ 223 (420)
T 2pb2_A 147 TKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEF 223 (420)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSEECCHHH
T ss_pred CEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhc---cCceEEEEeCCcCCCCeecCCHHH
Confidence 48999999999999988888776556667778888888899999999999997 479999999999888877889999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
+++|+++|++||++||+||+|+|+++.|..+.++.+++.+|++|+||++++|+ |+|++++++++++.+....+..+++.
T Consensus 224 l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~sK~l~~G~-~iG~~~~~~~l~~~l~~~~~~~t~~~ 302 (420)
T 2pb2_A 224 LKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHVGSHGSTYGG 302 (420)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTCC----CCEECC
T ss_pred HHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEecccccCCC-ceEEEEEhHHHHHhhcCCCcCcccCc
Confidence 99999999999999999999999998888766667788899999999999999 99999999999888877667778889
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
++++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|.++++.++... .....++++.|+++|
T Consensus 303 ~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~v~~~~~~-~~~~~~l~~~l~~~G 380 (420)
T 2pb2_A 303 NPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFD-IFSDIRGMGLLIGAELKPKY-KGRARDFLYAGAEAG 380 (420)
T ss_dssp CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHC-CEEEEEEETTEEEEEECGGG-TTCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEecceEEEEEECCCc-hHHHHHHHHHHHHCC
Confidence 9999999999999887777899999999999999998753333 44567788999999887410 014678999999999
Q ss_pred ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|.+.+++++++|++|++..+++++++++++|+++++ ++
T Consensus 381 i~v~~~~~~~iRl~~~~~~t~eei~~~~~~l~~~l~-~~ 418 (420)
T 2pb2_A 381 VMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVG-KV 418 (420)
T ss_dssp EECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred CEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 999998788999999999999999999999999987 53
No 19
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.4e-37 Score=286.81 Aligned_cols=271 Identities=29% Similarity=0.453 Sum_probs=232.8
Q ss_pred cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC--HHH-------------HHHHHHhcCCcEEEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD--ITA-------------LEKIFKESGDQIAGFL 65 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d--~~~-------------le~~i~~~~~~~~~v~ 65 (306)
+.+||+++++|||.+..++++++. +.++..+.|..+++..+|++| .+. ||++++++++++++|+
T Consensus 157 ~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi 236 (449)
T 2cjg_A 157 GTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFV 236 (449)
T ss_dssp CCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEE
T ss_pred CCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEE
Confidence 568999999999999999988886 455667777777788888887 443 8999976556899999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCH
Q 021893 66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK 145 (306)
Q Consensus 66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~ 145 (306)
++|+++++|.++++++++++|+++|++||++||+||+|+|+++.|..+.++.+++.+|++++||++ |+|++++++
T Consensus 237 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~ 311 (449)
T 2cjg_A 237 AEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGR 311 (449)
T ss_dssp ECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECG
T ss_pred EeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECH
Confidence 999999999889999999999999999999999999999999998876667778899999999988 789999999
Q ss_pred HHHhhc-----CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 146 EVMLCI-----QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 146 ~~~~~~-----~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
++++.+ ....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++..+..+++.|.++++
T Consensus 312 ~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~ 391 (449)
T 2cjg_A 312 RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAF 391 (449)
T ss_dssp GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEE
T ss_pred HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEE
Confidence 998863 334566788899999999999999887778899999999999999999865554215567788999998
Q ss_pred EEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 221 EFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+.. .....++++.|+++||.+.+++.+++|++|++.++++++++++++|+++++ ++
T Consensus 392 ~~~~---~~~~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~ 448 (449)
T 2cjg_A 392 SLPT---TADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALP-VV 448 (449)
T ss_dssp ECSS---HHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred EECC---hHHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 7763 335678999999999999998789999999999999999999999999987 53
No 20
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-37 Score=284.73 Aligned_cols=276 Identities=25% Similarity=0.375 Sum_probs=230.7
Q ss_pred cceEEEEecCCCCcccchhcccCCcccccc--CCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRG--FGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+.+||+++++|||.+..++..++....... ..+.. ..+..+|++|+++||++++++++++++|+++|+++++|
T Consensus 137 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G 216 (434)
T 3l44_A 137 RTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFG 216 (434)
T ss_dssp CCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTS
T ss_pred CCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCC
Confidence 468999999999999998887774322111 11111 24577889999999999997666899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP- 153 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~- 153 (306)
.++++++++++|+++|++||++||+||+|+|| +.|..+.++.+++.+|+.++||++++|+ |+|++++++++++.+.+
T Consensus 217 ~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~iG~~~~~~~i~~~~~~~ 294 (434)
T 3l44_A 217 IVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIGGGL-PIGAYGGKKEIMEQVAPL 294 (434)
T ss_dssp CBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTBTTT
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhcCCc-CeeeEEEcHHHHHhhccC
Confidence 99999999999999999999999999999999 8887777788899999999999999999 99999999999998876
Q ss_pred --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893 154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----- 226 (306)
Q Consensus 154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----- 226 (306)
..+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|.++++.+....
T Consensus 295 ~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 373 (434)
T 3l44_A 295 GPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHN-IDITLNRLKGALTVYFTTNTIEDYD 373 (434)
T ss_dssp SSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEETTEEEEEESSSCCCSHH
T ss_pred CCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEeeccEEEEEEecCcccchh
Confidence 3467789999999999999999988778999999999999999999876653 55678889999999884321
Q ss_pred -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
......++++.|+++||.+.+++.+.+|++ +..+++++++++++|+++++ ++.+
T Consensus 374 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~--~~~t~e~i~~~l~~l~~~l~-~~~~ 432 (434)
T 3l44_A 374 AAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLT--TEHTKEDIEYTIEAVGRAFA-ALAD 432 (434)
T ss_dssp HHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEECC--TTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred hccccCHHHHHHHHHHHHHCCeEEeecCCCcEEEe--cccCHHHHHHHHHHHHHHHH-HHHh
Confidence 122346789999999999999877888985 78999999999999999998 7643
No 21
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=3.4e-38 Score=308.07 Aligned_cols=278 Identities=21% Similarity=0.354 Sum_probs=222.1
Q ss_pred cceEEEEecCCCCcccchhcccCCcccccc-CCCCC---------------CCccc--cc------------CCCH----
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRG-FGPLL---------------PGHLK--VD------------FGDI---- 47 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~-~~~~~---------------~~~~~--~~------------~~d~---- 47 (306)
|++||+++++|||.|++++++++...+... +.|++ +++.. .| |+|.
T Consensus 483 r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 562 (831)
T 4a0g_A 483 VVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIF 562 (831)
T ss_dssp CEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHH
T ss_pred ccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhh
Confidence 569999999999999999999997555431 11221 11111 11 2332
Q ss_pred --------------HHHHHHHHh-----cCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc
Q 021893 48 --------------TALEKIFKE-----SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 107 (306)
Q Consensus 48 --------------~~le~~i~~-----~~~~~~~v~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~ 107 (306)
+.||+.|++ +++++++|++||+ ++.+|.++++++||++|+++|++||++||+||+|+|||
T Consensus 563 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfG 642 (831)
T 4a0g_A 563 DKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFW 642 (831)
T ss_dssp CGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTT
T ss_pred cccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccc
Confidence 567887763 3578999999997 99999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC------CccCCCCCCHHHHHHHHHHHHHHhhcc
Q 021893 108 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG------EHGSTFGGNPLASAVAIASLDVIRDEK 181 (306)
Q Consensus 108 ~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aa~~al~~~~~~~ 181 (306)
+.|..|+++++++.||++|+||+++||+.|+|++++++++++.+... .+..||.+|++++++++++++.+.+++
T Consensus 643 RtG~~fa~e~~gv~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~ 722 (831)
T 4a0g_A 643 RLGVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE 722 (831)
T ss_dssp TTSBSSTHHHHSSCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT
T ss_pred cCCCchhhHhcCCCCcEEEEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH
Confidence 99999988999999999999999999944999999999999988653 378899999999999999999998776
Q ss_pred HHHHHHHHHHHHHH----HHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceeccCCCCE
Q 021893 182 LAERSAHLGEELRQ----HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKPTHDTI 252 (306)
Q Consensus 182 ~~~~~~~~~~~l~~----~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~~~ 252 (306)
+.++++++.+++++ .+.+....+ +.+..+++.|+++.+++..+. .......+.+.|+++||++.|. .+.
T Consensus 723 l~~~~~~~~~~l~~~l~~~l~~~l~~~-~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~-g~~ 800 (831)
T 4a0g_A 723 TNHNITSQGKTLRELWDEELVQQISSH-SAVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL-GNV 800 (831)
T ss_dssp TCTTBCTTSSBBCCCSCHHHHHHHHHS-TTEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB-TTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC-CCceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec-CCE
Confidence 66666555555432 333333444 378899999999999986421 1124667899999999999987 479
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 253 VRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 253 lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
||++|++.+++++|++++++|+++++ ++.
T Consensus 801 lrl~pp~~~t~e~id~~~~~l~~~l~-~l~ 829 (831)
T 4a0g_A 801 IYLMCGPCTSPEICRRLLTKLYKRLG-EFN 829 (831)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHT-TTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence 99999999999999999999999998 663
No 22
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=2e-36 Score=277.67 Aligned_cols=276 Identities=29% Similarity=0.518 Sum_probs=227.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccc--------cCC---------CHHHHHHHHHhcC-CcEEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--------DFG---------DITALEKIFKESG-DQIAG 63 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---------d~~~le~~i~~~~-~~~~~ 63 (306)
+.+||+++++|||.+..++..++.. ++..+.|...++..+ +++ |++.||+++++++ +++++
T Consensus 128 ~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~ 206 (433)
T 1zod_A 128 KYEIVGFAQSWHGMTGAAASATYSA-GRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAA 206 (433)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCSS-CCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCeEEEECCCcCCCChhHHhhcCCc-cccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEE
Confidence 3589999999999999888877643 334444444454333 334 3899999998643 47899
Q ss_pred EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893 64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA 143 (306)
Q Consensus 64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~ 143 (306)
|+++|+++++|.++++++++++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++|+ |+||+++
T Consensus 207 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G~-~ig~~~~ 285 (433)
T 1zod_A 207 FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGL-PLAAIVT 285 (433)
T ss_dssp EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTS-SCEEEEE
T ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCCC-CeeEEEE
Confidence 999999999998889999999999999999999999999999988887666677788899999999999998 9999999
Q ss_pred CHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893 144 DKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221 (306)
Q Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~ 221 (306)
++++++.+... .+..+++.|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~-~~~~~~~~g~~~~i~ 364 (433)
T 1zod_A 286 SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFD-CIGDVRGRGLLLGVE 364 (433)
T ss_dssp CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEE
T ss_pred hHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEE
Confidence 99998887653 244788889999999999999888778899999999999999998865553 455677889999998
Q ss_pred EecCC-----ChhhHHHHHHHHHHCCceeccCC--C--CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 222 FDKTA-----LPVSAYDICLKMKERGILAKPTH--D--TIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~--~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.... ......++++.|+++||.+.++. . +++|++|++..+++++++++++|+++++ ++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~-~~ 432 (433)
T 1zod_A 365 IVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE-RA 432 (433)
T ss_dssp EEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred EecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH-Hh
Confidence 86411 01346789999999999999864 2 8999999999999999999999999987 53
No 23
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=5.1e-36 Score=274.62 Aligned_cols=271 Identities=26% Similarity=0.426 Sum_probs=229.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCC--------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA 73 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~ 73 (306)
+.+||+++++|||.+..++..++........ |..++ +..+|++|+++||++++++++++++|+++|+++++
T Consensus 134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~ 212 (427)
T 3fq8_A 134 RDKIIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNS 212 (427)
T ss_dssp CCEEEEEETCCCCSCGGGCSSCCTHHHHHTC-CSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTT
T ss_pred CCEEEEECCCcCCCCHHHHHhcCCcccccCC-CCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCC
Confidence 4689999999999998888777754332221 33332 56788999999999999876789999999999999
Q ss_pred CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893 74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP 153 (306)
Q Consensus 74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~ 153 (306)
|.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|+.|+||++++|+ |+|++++++++++.+.+
T Consensus 213 G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~~G~~~~~~~~~~~~~~ 290 (427)
T 3fq8_A 213 GFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGGL-PVGAYGGKREIMQLVAP 290 (427)
T ss_dssp SCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGGTTS-SCEEEEECHHHHTTBTT
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhhCCc-ceEEEEEcHHHHHhhcc
Confidence 999999999999999999999999999999999 8887777778899999999999999999 99999999999998875
Q ss_pred C---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893 154 G---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---- 226 (306)
Q Consensus 154 ~---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---- 226 (306)
. .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|.++++.+....
T Consensus 291 ~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~ 369 (427)
T 3fq8_A 291 AGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETG-HAACGGQVSGMFGFFFTEGPVHNY 369 (427)
T ss_dssp TSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSCCCCSH
T ss_pred CCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeeeEEEEEEecCccccc
Confidence 3 467788889999999999999988788999999999999999999876653 55577889999999876421
Q ss_pred ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......++++.|+++||.+.+++.. |+.++..++++++++++++|+++++
T Consensus 370 ~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~--r~~~~~~~t~e~i~~~l~~l~~~l~ 425 (427)
T 3fq8_A 370 EDAKKSDLQKFSRFHRGMLEQGIYLAPSQFE--AGFTSLAHTEEDIDATLAAARTVMS 425 (427)
T ss_dssp HHHTTSCHHHHHHHHHHHHHTTEECCSSTTS--CEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHCCcEEecCCCC--CEEeeCcCCHHHHHHHHHHHHHHHH
Confidence 1122567999999999999998655 4455689999999999999999987
No 24
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=3.1e-36 Score=276.27 Aligned_cols=271 Identities=25% Similarity=0.394 Sum_probs=218.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCC--------CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL--------PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA 73 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~ 73 (306)
+.+||+++++|||.+..++..++....... .|.. ..+..++++|+++||++++++++++++|+++|+++++
T Consensus 135 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~ 213 (429)
T 4e77_A 135 RDKIIKFEGCYHGHADCLLVKAGSGALTLG-QPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNM 213 (429)
T ss_dssp CCEEEEETTCCCC-------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTT
T ss_pred CCEEEEEcCccCCCChhhhhhcCCcccccC-CCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCC
Confidence 468999999999999876655543211100 0111 2346778899999999999876789999999999999
Q ss_pred CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893 74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP 153 (306)
Q Consensus 74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~ 153 (306)
|.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|++|+||++++|+ |+|++++++++++.+.+
T Consensus 214 g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G~-~~G~~~~~~~~~~~l~~ 291 (429)
T 4e77_A 214 NCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGGM-PVGAFGGRREVMNALAP 291 (429)
T ss_dssp SCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTTS-CCEEEEECHHHHTTBTT
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCCC-CeEEEEECHHHHHHhcc
Confidence 999999999999999999999999999999999 8888777788899999999999999999 99999999999998876
Q ss_pred C---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893 154 G---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---- 226 (306)
Q Consensus 154 ~---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---- 226 (306)
. .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|+++++.+....
T Consensus 292 ~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~ 370 (429)
T 4e77_A 292 TGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEEN-IPLVVNHVGGMFGLFFTNADTVTC 370 (429)
T ss_dssp TSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEECCSSSCCCS
T ss_pred CCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEeeeEEEEEEccCccccc
Confidence 3 467788999999999999999987788999999999999999999876653 56678899999999987531
Q ss_pred -------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 227 -------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 227 -------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
......++++.|+++||.+.+++...+|+ +..++++++++++++|+++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 371 YQDVMNCDVERFKRFFHLMLEEGVYLAPSAFEAGFM--SLAHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCCHHHHHHHHHHHHHHHT
T ss_pred ccccccccHHHHHHHHHHHHHCCeEEeecCCCCEEE--eccCCHHHHHHHHHHHHHHHH
Confidence 01234789999999999999987666665 488999999999999999987
No 25
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=1.8e-36 Score=277.85 Aligned_cols=273 Identities=25% Similarity=0.400 Sum_probs=229.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccC--CCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGF--GPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+.+||+++++|||.+..++..++........ .+.. ..+..+|++|+++||++++++++++++|+++|+++++|
T Consensus 135 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G 214 (429)
T 3k28_A 135 RNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMG 214 (429)
T ss_dssp CCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTS
T ss_pred CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCC
Confidence 4689999999999999988777643221111 1111 13567889999999999997767899999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|+.++||++++|+ |+|++++++++++.+.+.
T Consensus 215 ~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~iG~~~~~~~~~~~~~~~ 292 (429)
T 3k28_A 215 VVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGGL-PVGAYGGKAEIMRQVAPS 292 (429)
T ss_dssp CBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTBTTT
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCCC-CeEEEEEcHHHHhhhccC
Confidence 99999999999999999999999999999999 8887776778889999999999999999 999999999999988653
Q ss_pred ---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893 155 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----- 226 (306)
Q Consensus 155 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----- 226 (306)
.+..+++.++++++++.++++.+. +++.++++++++++++.|+++...++ .+..+++.|.++++.+....
T Consensus 293 ~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 370 (429)
T 3k28_A 293 GPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHG-IPHHINRAGSMIGIFFTDEPVINYD 370 (429)
T ss_dssp SSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSSCCCSHH
T ss_pred CCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEeeccEEEEEEecCCccccc
Confidence 366788999999999999998765 66889999999999999999876663 56678899999999875321
Q ss_pred -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
......++++.|+++||.+.|++.+.+|++ +.++++++++++++|+++++ ++
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~~t~e~i~~~l~~l~~~l~-~~ 427 (429)
T 3k28_A 371 AAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFLS--TVHSDADIEATIAAAEIAMS-KL 427 (429)
T ss_dssp HHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCCC--TTCCHHHHHHHHHHHHHHHH-TC
T ss_pred ccccccHHHHHHHHHHHHHCCeEEecCCCCCEEEE--CCCCHHHHHHHHHHHHHHHH-HH
Confidence 122357889999999999999877888885 78999999999999999998 65
No 26
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=2.6e-36 Score=278.38 Aligned_cols=275 Identities=25% Similarity=0.468 Sum_probs=227.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC----------C--------HHHHHHHHHhcC-CcEE
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG----------D--------ITALEKIFKESG-DQIA 62 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------d--------~~~le~~i~~~~-~~~~ 62 (306)
+.+||+++++|||.+..++..++.+.++..+.|..+++..++.+ | +++||++|++++ ++++
T Consensus 142 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~ 221 (449)
T 3a8u_X 142 KTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIA 221 (449)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEE
T ss_pred CCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 35899999999999988888777555555666655554333321 5 999999998653 4789
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceee
Q 021893 63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAV 141 (306)
Q Consensus 63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~ 141 (306)
+|+++|+++++|.++++++++++|.++|++||++||+||+|++|++.|..+.++.+++.+|++|+||++++| + |+|++
T Consensus 222 ~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~-~~G~~ 300 (449)
T 3a8u_X 222 AVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAI-PMGAV 300 (449)
T ss_dssp EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSS-CCEEE
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCC-ceEEE
Confidence 999999999999889999999999999999999999999999998888766667778889999999999988 7 99999
Q ss_pred EeCHHHHhhcCCC---------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893 142 LADKEVMLCIQPG---------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 212 (306)
Q Consensus 142 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 212 (306)
++++++++.+... .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++ ..++ .+..++
T Consensus 301 ~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~ 378 (449)
T 3a8u_X 301 IASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI-KGAK-NVIDIR 378 (449)
T ss_dssp EEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-TTST-TEEEEE
T ss_pred EECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-hcCC-CeEEEe
Confidence 9999998887653 3456788899999999999999887788999999999999999874 2232 445567
Q ss_pred EeeeEEEEEEecCCChh--hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 213 GRGLFNAVEFDKTALPV--SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 213 ~~g~~~~i~~~~~~~~~--~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.|.++++.++...... +..++.+.|+++||.+.+++ +++|++|++.++++++++++++|+++++ ++
T Consensus 379 ~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~l~~~l~-~~ 447 (449)
T 3a8u_X 379 NFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDAVGEVLN-KL 447 (449)
T ss_dssp EETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred eeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 88999999987522111 33479999999999999975 8999999999999999999999999988 65
No 27
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=3e-36 Score=272.99 Aligned_cols=264 Identities=49% Similarity=0.906 Sum_probs=236.3
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+...+|||.+..++.+++...+...+.|..+++..++++|+++|+++++ +++++|++++++|++|.+.+++++
T Consensus 128 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~ 204 (392)
T 3ruy_A 128 AEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAIT---PNTAAFILEPIQGEAGINIPPAGF 204 (392)
T ss_dssp CEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCC---TTEEEEEECSSBSTTTSBCCCTTH
T ss_pred cEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhc---cCeEEEEEeCccCCCCCccCCHHH
Confidence 58999999999999999998887778888888888888899999999999998 579999999999999999989999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
+++|.++|++||++||+||+|+++++.|..+..+.++..+|++++||+++|| + |+||+++++++++.+....+..+++
T Consensus 205 l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~-~~G~~~~~~~~~~~~~~~~~~~~~~ 283 (392)
T 3ruy_A 205 LKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVF-PISCAAANRDILGVFEPGSHGSTFG 283 (392)
T ss_dssp HHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTS-CCEEEEECHHHHTTCCTTSSCCSST
T ss_pred HHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhhCChh-hhEEEEECHHHHhhhccCCcCCCCC
Confidence 9999999999999999999999998888877777888899999999999999 7 9999999999999998877888899
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
.++++++++.++++.+..+++.++++++.+++++.|+++.. +.+...++.|.++++.++. +..++.+.|.++
T Consensus 284 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~g~~~~~~~~~-----~~~~l~~~l~~~ 355 (392)
T 3ruy_A 284 GNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDN---PMITEVRGKGLFIGIELNE-----PARPYCEQLKAA 355 (392)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCC---TTEEEEEEETTEEEEEESS-----CSHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeeeEEEEEEcc-----hHHHHHHHHHHC
Confidence 99999999999999887777889999999999998887531 2455667788888888753 457899999999
Q ss_pred CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
||.+.+++.+++|++++...+++++++++++|+++++
T Consensus 356 gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 356 GLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVLS 392 (392)
T ss_dssp TEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999889999999999999999999999998763
No 28
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=4.5e-36 Score=278.29 Aligned_cols=267 Identities=24% Similarity=0.407 Sum_probs=218.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc-------cc------ccCC------CHHHHHHHHHhcCC---c
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-------LK------VDFG------DITALEKIFKESGD---Q 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~------d~~~le~~i~~~~~---~ 60 (306)
.+||+++++|||.+.+++++++.........|. +++ .. ++++ |+++|+++|+++++ +
T Consensus 180 ~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 258 (472)
T 1ohv_A 180 YSILSFMGAFHGRTMGCLATTHSKAIHKIDIPS-FDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKT 258 (472)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCC-CCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CeEEEECCCcccccHHHHhcCCCccccccCCCC-CCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCC
Confidence 799999999999999999888854332211121 111 11 1122 68999999986422 7
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC--CcEEEeccc-ccCCccc
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKA-LGGGVIP 137 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~--~d~~s~sK~-~~~G~~~ 137 (306)
+++|++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++. +|+.+|||+ ++||+
T Consensus 259 ~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~-- 336 (472)
T 1ohv_A 259 VAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGF-- 336 (472)
T ss_dssp EEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEE--
T ss_pred EEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCc--
Confidence 9999999999999999999999999999999999999999999999999887777888876 999999999 78777
Q ss_pred ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893 138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~ 217 (306)
++ ++++ ..+....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++..+..+++.|.+
T Consensus 337 ---~~-~~~~-~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~ 411 (472)
T 1ohv_A 337 ---FH-KEEF-RPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTF 411 (472)
T ss_dssp ---EE-CGGG-SCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTE
T ss_pred ---cC-chhh-cccccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceE
Confidence 44 6665 334455677888899999999999999988778899999999999999999865553235567788999
Q ss_pred EEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++++.. ......+++.|+++||.+.|.+.++||++|++.+++++|++++++|+++++ ++
T Consensus 412 ~~~~~~~---~~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~-~~ 471 (472)
T 1ohv_A 412 CSFDTPD---ESIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILA-DF 471 (472)
T ss_dssp EEEECSS---HHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-TC
T ss_pred EEEEeCC---hhHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-hc
Confidence 9987653 345678999999999999997778999999999999999999999999988 54
No 29
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=7.6e-36 Score=271.30 Aligned_cols=274 Identities=32% Similarity=0.538 Sum_probs=241.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+.+.+|||....+...++...+...+.|...++..+|++|+++|+++++ +++++|+++|+++.+|.+.++.+.
T Consensus 129 ~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~p~np~g~~~~~~~~~ 205 (406)
T 4adb_A 129 SGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALID---DSTCAVIVEPIQGEGGVVPASNAF 205 (406)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCS---TTEEEEEECSEETTTTSEECCHHH
T ss_pred cEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhc---CCeEEEEEeCCcCCCCCccCCHHH
Confidence 68999999999999999988887777777778778888999999999999987 579999999877777766678999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
+++|.++|++||++||+||+|+|+++.|..+..+.++..+|++++||.+++|+ |+||+++++++++.+....+..+++.
T Consensus 206 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~ 284 (406)
T 4adb_A 206 LQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGF-PVGALLATEECARVMTVGTHGTTYGG 284 (406)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHHTCCTTSSCCSSTT
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEEEechhhcCCC-CeEEEEEcHHHHhhhccCCcCCCCCC
Confidence 99999999999999999999999988888776777788899999999999998 99999999999999988778888999
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
++++++++.++++.+..+++.++++++++++++.|+++...+ ......++.|.++++.++... .....++++.|+++|
T Consensus 285 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~g 362 (406)
T 4adb_A 285 NPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRY-GLFSEVRGLGLLIGCVLNADY-AGQAKQISQEAAKAG 362 (406)
T ss_dssp CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEETTEEEEEECTTT-TTCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEEEEEEEEEEeCCc-HHHHHHHHHHHHHCC
Confidence 999999999999988777789999999999999999987654 255667788999999887521 125788999999999
Q ss_pred ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
|.+.+++.+++|++++..++++++++++++|+++++ ++.+
T Consensus 363 i~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~-~~~~ 402 (406)
T 4adb_A 363 VMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACE-HFVS 402 (406)
T ss_dssp EECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHC
T ss_pred cEEeecCCCeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 999998889999999999999999999999999998 7643
No 30
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=1.4e-35 Score=271.86 Aligned_cols=273 Identities=32% Similarity=0.523 Sum_probs=224.4
Q ss_pred cceEEEEecCCCCcccchhcccCCcc-ccccCCCCCCCccccc-----------CCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI 69 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~d~~~le~~i~~~~~~~~~v~v~~~ 69 (306)
+.+||++.++|||.+..++.+++... +...+.+..+++..++ +.|+++|+++++++++++++|+++|+
T Consensus 134 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~ 213 (429)
T 1s0a_A 134 RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPI 213 (429)
T ss_dssp CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSS
T ss_pred CCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeec
Confidence 46899999999999888777766432 3344444444432222 25799999999875567999999999
Q ss_pred -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHH
Q 021893 70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEV 147 (306)
Q Consensus 70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~ 147 (306)
+|++|.++++++++++|.++|++||++||+||+|+||++.|..+.++.+++.+|++++||++++| + |+||+++++++
T Consensus 214 ~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~-~iG~~~~~~~~ 292 (429)
T 1s0a_A 214 VQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTM-TLSATLTTREV 292 (429)
T ss_dssp EECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSS-CCEEEEECHHH
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCc-cceEEEeCHHH
Confidence 99999889999999999999999999999999999998888766667778889999999999999 8 99999999999
Q ss_pred HhhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 148 MLCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 148 ~~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
++.+... .+..+++.|+++++++.++++.+.++++.+++++++++++++|+++.. ++ .+..+++.|.++++.+
T Consensus 293 ~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~-~~~~~~~~g~~~~~~~ 370 (429)
T 1s0a_A 293 AETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AE-MVADVRVLGAIGVVET 370 (429)
T ss_dssp HHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-CT-TEEEEEEETTEEEEEE
T ss_pred HHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CC-CEEEEEEeeEEEEEEE
Confidence 8887653 245678889999999999999888777889999999999999987632 33 3445677788889887
Q ss_pred ecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 223 DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+. ..+..++.+.|+++||.+.+. .+++|++++..++++++++++++|+++++ ++.
T Consensus 371 ~~---~~~~~~l~~~l~~~Gi~v~~~-~~~iRis~~~~~t~e~i~~~~~~l~~~~~-~~~ 425 (429)
T 1s0a_A 371 TH---PVNMAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNRAVQ-DET 425 (429)
T ss_dssp SS---CBCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHHHTS-SGG
T ss_pred CC---cccHHHHHHHHHHCCCEEecc-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-hhh
Confidence 64 235678999999999999986 47999999999999999999999999887 543
No 31
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.8e-35 Score=270.47 Aligned_cols=264 Identities=36% Similarity=0.661 Sum_probs=214.4
Q ss_pred cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC---------------------CHHHHH-HHHHhcC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG---------------------DITALE-KIFKESG 58 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------------------d~~~le-~~i~~~~ 58 (306)
+.+||++..+|||.+..++.+++.. .++..+.|...++..+|++ |+++|+ ++++++.
T Consensus 129 ~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~ 208 (419)
T 2eo5_A 129 RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV 208 (419)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC
T ss_pred CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc
Confidence 4689999999999999888887754 4444555555555555554 367888 8887532
Q ss_pred --CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-c
Q 021893 59 --DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-V 135 (306)
Q Consensus 59 --~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~ 135 (306)
+++++|+++|+++++|.++++++++++|.++|++||++||+||+|++|++.|..+.++.++..+|++|+||++++| +
T Consensus 209 ~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~ 288 (419)
T 2eo5_A 209 PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIM 288 (419)
T ss_dssp CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTS
T ss_pred CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCcc
Confidence 4689999999988899888999999999999999999999999999998888766667778889999999999999 8
Q ss_pred ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893 136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215 (306)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g 215 (306)
|+||++++++++ .+ ...+..+++.|+++++++.++++.+.+ +.++++++++++++.|+++ . ..+++.|
T Consensus 289 -riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~l~~~L~~~---~----~~~~~~g 356 (419)
T 2eo5_A 289 -PIGATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQGL---A----DDVRGIG 356 (419)
T ss_dssp -CCEEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTS---S----SEEEEET
T ss_pred -ceEEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh---h----hheEeee
Confidence 999999999988 77 445667888999999999999987654 7788888888888888664 1 2557789
Q ss_pred eEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 216 LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 216 ~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++++.+.+. ..... +++.|+++||.+.+++.+++|+++++..+++++++++++|+++++ ++
T Consensus 357 ~~~~i~~~~~--~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~-~~ 418 (419)
T 2eo5_A 357 LAWGLEYNEK--KVRDR-IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIK-VV 418 (419)
T ss_dssp TEEEEECSCH--HHHHH-HHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred EEEEEEEecC--ccHHH-HHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-hc
Confidence 9998887320 12355 999999999999998778999999999999999999999999987 54
No 32
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=5.4e-35 Score=268.42 Aligned_cols=274 Identities=26% Similarity=0.402 Sum_probs=221.8
Q ss_pred cceEEEEecCCCCcccchhcccCCcccc--ccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAI--RGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+.+||+++++|||.+..++..++..... .+..+.. ..+..++++|++.||++++++++++++|+++|+++++|
T Consensus 138 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G 217 (434)
T 2epj_A 138 RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAG 217 (434)
T ss_dssp CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSS
T ss_pred CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCC
Confidence 4689999999999998887666532111 0111111 13466788999999999986545799999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|++|+||++++|+ |+|++++++++++.+...
T Consensus 218 ~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~v~~~~~~~~~l~~~ 295 (434)
T 2epj_A 218 VIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGGF-PVGAVAGSREVMSLLTPQ 295 (434)
T ss_dssp CBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTBTTT
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhcCCc-ceeeeeecHHHHHhhccC
Confidence 88889999999999999999999999999998 6676565677788999999999999998 999999999999988762
Q ss_pred ---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893 155 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----- 226 (306)
Q Consensus 155 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----- 226 (306)
.+..+|..|+++++++.++++.+.++++.++++++++++++.|+++...++ ....+++.|.++++.++...
T Consensus 296 ~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~ 374 (434)
T 2epj_A 296 GKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTG-LPYTINRVESMMQLFIGVEEVSNAA 374 (434)
T ss_dssp SSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEETTEEEEEETCSCCSSHH
T ss_pred CCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEeeeEEEEEEeCCCcccch
Confidence 356788899999999999999987778999999999999999998754432 44457788999999886411
Q ss_pred -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
......++++.|+++||.+.+++...+|+ ++.++++++++++++|+++++ ++
T Consensus 375 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~l~-~~ 431 (434)
T 2epj_A 375 QARKADKKFYVKLHEEMLRRGVFIAPSNLEAVFT--GLPHQGEALEIAVEGLRSSLK-TV 431 (434)
T ss_dssp HHTTSCHHHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCSHHHHHHHHHHHHHHHH-HH
T ss_pred hccccCHHHHHHHHHHHHHCCeEEeccCCCcEEE--eccCCHHHHHHHHHHHHHHHH-HH
Confidence 02346789999999999999986555554 588999999999999999988 64
No 33
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=2.4e-34 Score=263.13 Aligned_cols=277 Identities=27% Similarity=0.559 Sum_probs=227.1
Q ss_pred ceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC----------CHHHHHHHHHh--cCCcEEEEEEccc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----------DITALEKIFKE--SGDQIAGFLFEPI 69 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------d~~~le~~i~~--~~~~~~~v~v~~~ 69 (306)
.+||+++.+|||.+..++..++.. .++..+.|...++..+|.+ |+++|++++++ +++++++|+++|+
T Consensus 129 ~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~ 208 (426)
T 1sff_A 129 SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPV 208 (426)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSB
T ss_pred CeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecc
Confidence 479999999999987666655522 2334455554455444442 68999999975 1247899999998
Q ss_pred cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHh
Q 021893 70 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 149 (306)
Q Consensus 70 ~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~ 149 (306)
++++|.++++++++++|.++|++||++||+||+|+||++.|..+.++.++..+|+.|+||.+++|+ |+||+++++++++
T Consensus 209 ~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~Gl-riG~~~~~~~~~~ 287 (426)
T 1sff_A 209 QGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMD 287 (426)
T ss_dssp CTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSS-CCEEEEEEHHHHT
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCCC-ceEEEEEcHHHHh
Confidence 777888899999999999999999999999999999988887666677788899999999999998 9999999999999
Q ss_pred hcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC----
Q 021893 150 CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT---- 225 (306)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~---- 225 (306)
.+....+..+++.++++++++.++++.+.++++.+++++++++++++|+++...++ .+...++.|.++++.+...
T Consensus 288 ~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~ 366 (426)
T 1sff_A 288 AVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHN 366 (426)
T ss_dssp TSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCT-TEEEEEEETTEEEEEEBGGGCTT
T ss_pred hhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEEEecCcccc
Confidence 88766667788889999999999999888777899999999999999998765553 4445566799999988531
Q ss_pred -CChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 226 -ALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 226 -~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+......++++.|+++||.+.++. .+++|++++..++++++++++++|+++++ ++.
T Consensus 367 ~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~-~~~ 425 (426)
T 1sff_A 367 KPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFD-EAK 425 (426)
T ss_dssp SBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHC
T ss_pred CCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHh
Confidence 013457789999999999999875 68999999889999999999999999988 653
No 34
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=7.5e-35 Score=264.25 Aligned_cols=267 Identities=32% Similarity=0.652 Sum_probs=226.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+++++|||.+..++...+......++.|...++..+|++|+++|+++++ +++++|++++++|++|.++++.+.
T Consensus 129 ~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~ 205 (397)
T 2ord_A 129 YRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMS---EDVCAVFLEPIQGESGIVPATKEF 205 (397)
T ss_dssp CEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCC---TTEEEEEECSEECTTTCEECCHHH
T ss_pred ceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhh---cCeEEEEEecccCCCCcccCCHHH
Confidence 57999999999998866666554444455667777788888999999999997 479999999999999986788999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
+++|.++|++||++||+||+|+|+++.|..+....++..+|++|+||.+++|+ |+|+++++++++ .+....+..+++.
T Consensus 206 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~-r~G~~~~~~~~~-~l~~~~~~~~~~~ 283 (397)
T 2ord_A 206 LEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTTAKGLGGGV-PIGAVIVNERAN-VLEPGDHGTTFGG 283 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECSTTC-CCCTTSSCCSSTT
T ss_pred HHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCeeeeccccCCCc-CeEEEEEchHhc-ccCCCCcCCCCCC
Confidence 99999999999999999999999887776554555666789999999999999 999999998887 7765556677888
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
++++++++.++++.+.++++.++++++++++++.|+++...++ .+...++.|.++++.++. ..+..++++.|+++|
T Consensus 284 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~~l~~~l~~~g 359 (397)
T 2ord_A 284 NPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYD-VVADVRGMGLMIGIQFRE---EVSNREVATKCFENK 359 (397)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEECT---TSCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-ceEEEEEEeEEEEEEECC---hHHHHHHHHHHHHCC
Confidence 9999999999999887777899999999999999998753443 344456778888988864 235778999999999
Q ss_pred ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|.+.+++++++|++++...+++++++++++|+++++
T Consensus 360 i~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 360 LLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp EECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEccCCCCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 999998788999999989999999999999999887
No 35
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=3.7e-34 Score=262.06 Aligned_cols=270 Identities=27% Similarity=0.435 Sum_probs=218.8
Q ss_pred cceEEEEecCCCCcccchhcccCCcccc--ccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAI--RGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+.+||+++++|||.+..++..++..... .+..+.. ..+..+|++|+++||++++++++++++|+++|+++++|
T Consensus 134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G 213 (424)
T 2e7u_A 134 RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAG 213 (424)
T ss_dssp CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTS
T ss_pred CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCC
Confidence 4689999999999988877665431110 0111111 23466788999999999986545799999999999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG 154 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~ 154 (306)
.++++++++++|+++ ++||++||+||+|+|| +.|..+..+.+++.+|++|+||++++|+ |+|++++++++++.+.+.
T Consensus 214 ~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~~~~~~~~~~~~~~~ 290 (424)
T 2e7u_A 214 VLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILGGGL-PAAAYAGRREIMEKVAPL 290 (424)
T ss_dssp CBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTTS-SCEEEEECHHHHTTBTTT
T ss_pred CcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhhCCc-ceEEEEEcHHHHhhhccc
Confidence 888999999999999 9999999999999998 6676665667788999999999999998 999999999999988762
Q ss_pred ---CccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893 155 ---EHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---- 226 (306)
Q Consensus 155 ---~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---- 226 (306)
.+..+++.|+++++++.++++.+.+ +++.+++++++++++++|+++...++ ....+++.|.++++.+....
T Consensus 291 ~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~ 369 (424)
T 2e7u_A 291 GPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKG-LPHTVNRVGSMITVFFTEGPVVTF 369 (424)
T ss_dssp SSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSSCCCSH
T ss_pred CCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeeceEEEEEEeCCCCcch
Confidence 3566888999999999999999877 77899999999999999998865543 44457788999999886411
Q ss_pred ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
......++++.|+++||.+.+++...+|+ +..++++++++++++|++++
T Consensus 370 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 370 QDARRTDTELFKRFFHGLLDRGIYWPPSNFEAAFL--SVAHREEDVEKTLEALRKAL 424 (424)
T ss_dssp HHHTTSCHHHHHHHHHHHHTTTEECCSSSSSCEEC--CTTCCHHHHHHHHHHHHHHC
T ss_pred hhhcccCHHHHHHHHHHHHHCCeEEeccCCCceEe--eccCCHHHHHHHHHHHHHhC
Confidence 12346689999999999999976555554 58899999999999998764
No 36
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=5.8e-34 Score=262.97 Aligned_cols=273 Identities=23% Similarity=0.304 Sum_probs=204.6
Q ss_pred cceEEEEecCCCCcccchhcccCCcc---ccccCC-CCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCccc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNE---AIRGFG-PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVII 77 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~ 77 (306)
+.+||+++++|||.+..++..++... ...+.. +....+..++++|+++||++++++++++++|+++|+++++|.++
T Consensus 139 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~ 218 (453)
T 2cy8_A 139 RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTP 218 (453)
T ss_dssp CCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEE
T ss_pred CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcC
Confidence 46899999999999887766543200 000110 01123566788999999999986545799999999988899888
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC----
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---- 153 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~---- 153 (306)
++++++++|+++|++||++||+||+|+|+ +.|..+.++.+++.+|++|+||++++|+ |+|++++++++++.+..
T Consensus 219 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~v~~~~~~~~~l~~~~~~ 296 (453)
T 2cy8_A 219 VSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPDLTCLAKASAGGL-PGGILGGREDVMGVLSRGSDR 296 (453)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTSSSCC--
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcEEEEChhhhCCc-ceEEEechHHHHHHhccccCC
Confidence 89999999999999999999999999998 7776665667788899999999999999 99999999999998876
Q ss_pred -CCccCCCCCCHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec-----CC
Q 021893 154 -GEHGSTFGGNPLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-----TA 226 (306)
Q Consensus 154 -~~~~~~~~~~~~~~~aa~~al~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~-----~~ 226 (306)
..+..+++.|+++++++.++++. + .+++.++++++++++++.|+++...++ ....+++.|.++++.++. ..
T Consensus 297 ~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~ 374 (453)
T 2cy8_A 297 KVLHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNHLFARKG-LNWLAYGRFSGFHLMPGLPPNTTDT 374 (453)
T ss_dssp -------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECCTTEEEEEETSCTTCCCC
T ss_pred CceeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEeeeEEEEEEecccccccc
Confidence 13556788999999999999998 7 677899999999999999998865543 444577889999998863 10
Q ss_pred -----------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 227 -----------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 227 -----------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
......++++.|+++||.+.|. +.+|+ +..++++++++++++|+++++ ++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~--~~~~l--~~~~t~~~i~~~l~~l~~~l~-~~~~ 437 (453)
T 2cy8_A 375 GSITRAEVARPDVKMIAAMRMALILEGVDIGGR--GSVFL--SAQHEREHVEHLVTTFDRVLD-RLAD 437 (453)
T ss_dssp HHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT--TEEEC--CTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred ccccccccccccHHHHHHHHHHHHHCCeEEeCC--CCEEe--eccCCHHHHHHHHHHHHHHHH-HHHh
Confidence 1233678999999999999764 34554 588999999999999999998 7754
No 37
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=2.2e-37 Score=284.72 Aligned_cols=265 Identities=22% Similarity=0.308 Sum_probs=222.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||+|+++|||.+.+++ +++ ...+. .+.+..+||+|+++|+++++++++++++|++||+++++|.++++++
T Consensus 182 r~~ii~~~~~yHG~~~~~~--sg~--~~~g~---~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~ 254 (465)
T 2yky_A 182 RKTVLAFDGGYHGGLLNFA--SGH--APTNA---PYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERA 254 (465)
Confidence 4789999999999998877 331 11111 1145778899999999999876568999999999988998999999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-----CCc
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-----GEH 156 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-----~~~ 156 (306)
++++|+++|++||++||+||+|+ + +.|..+.++.+++.||++|+||++++|+ |+||+++++++++.+.+ ..+
T Consensus 255 ~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t~sK~lg~G~-piG~v~~~~~i~~~l~~~~~g~~~~ 331 (465)
T 2yky_A 255 FLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTTLGKYIGGGM-SFGAFGGRRDLMERFDPARDGAFAH 331 (465)
Confidence 99999999999999999999999 6 7787777888899999999999999999 99999999999998876 246
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----------
Q 021893 157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---------- 226 (306)
Q Consensus 157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---------- 226 (306)
..++++|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|+++++.+.+.+
T Consensus 332 ~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~ 410 (465)
T 2yky_A 332 AGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQ-APLQFTGLGSLGTIHFSRAPIRSAGDVRAA 410 (465)
Confidence 7888999999999999999998888999999999999999999865552 55678899999999876411
Q ss_pred ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 227 LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 227 ~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.......+++.|+++||++.|.+.+. |++.++++||++++++|+++++ ++.
T Consensus 411 d~~~~~~~~~~ll~~GV~v~p~~~~~----~s~~~t~edid~~l~~l~~~l~-~~~ 461 (465)
T 2yky_A 411 DQQLKELFFFHMLRKGIYLAPRGMYA----LSLEIADAGRDAFAEALADFIG-EQR 461 (465)
Confidence 01125578999999999999875332 6688999999999999999988 653
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=2.1e-33 Score=254.55 Aligned_cols=265 Identities=33% Similarity=0.574 Sum_probs=219.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||++..+|||.+..+....+.......+.|...++..++++|+++|+++++ +++++|+++|+++++|.+.++++
T Consensus 130 ~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~~~~ 206 (395)
T 1vef_A 130 RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVD---EETAAVILEPVQGEGGVRPATPE 206 (395)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSEECCHH
T ss_pred CCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhc---cCEEEEEEeCccCCCCccCCCHH
Confidence 467999999999998776666554333334455555666777889999999997 47999999999999998888999
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
++++|.++|++||++||+||+|+|+++.|..+..+..+..+|++|+||.+++|+ |+|++++++++++.+....+..+++
T Consensus 207 ~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g~-~~G~~~~~~~~~~~l~~~~~~~~~~ 285 (395)
T 1vef_A 207 FLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGV-PLGVAVMREEVARSMPKGGHGTTFG 285 (395)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTS-SCEEEEEEHHHHHTSCTTSSCCSST
T ss_pred HHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEEEEcccccCCC-ceEEEEehHHHHhhhccCCcCCCcC
Confidence 999999999999999999999998877776555566677889999999999998 9999999999988887655666778
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-H
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-E 240 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~ 240 (306)
.++++++++.++++.+..+++.++++++++++++.|+++.. +.+...++.|.++++.++. ...++++.|+ +
T Consensus 286 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~g~~~~~~~~~-----~~~~l~~~l~~~ 357 (395)
T 1vef_A 286 GNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS---PKIREVRGMGLMVGLELKE-----KAAPYIARLEKE 357 (395)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC---TTEEEEEEETTEEEEEESS-----CSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc---CceEEEEEEEEEEEEEEcC-----hHHHHHHHHHHH
Confidence 89999999999999887666788899999999988877532 1233456778888988763 2567899999 9
Q ss_pred CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+||.+.+++.+++|++++..++++++++++++|+++++
T Consensus 358 ~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 395 (395)
T 1vef_A 358 HRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA 395 (395)
T ss_dssp HCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence 99999998789999999889999999999999998763
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-32 Score=247.52 Aligned_cols=258 Identities=34% Similarity=0.659 Sum_probs=214.8
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++.+.+||+....+....+.......+.|..+++..++++|+++|+++++ +++++|+++|+++++|.+.+++++
T Consensus 118 ~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~~~~~ 194 (375)
T 2eh6_A 118 WKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLD---EETAGIIIEVIQGEGGVNEASEDF 194 (375)
T ss_dssp CEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCC---TTEEEEEECSEETTTTSEECCHHH
T ss_pred CEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhc---CCeEEEEEeCccCCCCCcCCCHHH
Confidence 68999999999988877766654333334556656677788889999999887 479999999999999988889999
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
+++|.++|++||+++|+||+|+++++.+..+..+.++..+|++++||.+++|+ |+|++++++++++.+.......++..
T Consensus 195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~SK~~~~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~ 273 (375)
T 2eh6_A 195 LSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGV-PIGAILAREEVAQSFTPGSHGSTFGG 273 (375)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTS-CCEEEEEEHHHHTTCCTTSCCCSSTT
T ss_pred HHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEcccccCCC-CeEEEEEcHHHHhhhcCCCCCCCCCC
Confidence 99999999999999999999999877775555566666789999999999998 99999999999888877556667778
Q ss_pred CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
+++.++++.++++.+. ++.++++++++++++.|+++. . ...++.|.++++.++. +..++++.|+++|
T Consensus 274 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~-----~-~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~g 340 (375)
T 2eh6_A 274 NPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKELG-----K-GKVKGRGLMLGLELER-----ECKDYVLKALEKG 340 (375)
T ss_dssp CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTT-----S-SEEEEETTEEEEECSS-----CCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHh-----c-CCceEEEEEEEEEEcC-----cHHHHHHHHHHCC
Confidence 8999988888888775 577888888888888887752 1 2456778888887763 2567899999999
Q ss_pred ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
|.+.+++.+++|++++...+++++++++++|++++
T Consensus 341 i~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 341 LLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp EECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred CEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 99998778899999998999999999999998763
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.95 E-value=2.5e-27 Score=216.56 Aligned_cols=258 Identities=13% Similarity=0.116 Sum_probs=183.7
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+...+||+....+.......... |..+....+ ..|+++||+++++ +++++|++++++|++| ++++++.
T Consensus 144 d~Vi~~~~~y~~~~~~~~~~g~~~~~~----~~~~~~~~~-~~d~~~le~~i~~--~~~~~vil~~p~nptG-~~~~~~~ 215 (421)
T 3l8a_A 144 DAVLINSPVYYPFARTIRLNDHRLVEN----SLQIINGRF-EIDFEQLEKDIID--NNVKIYLLCSPHNPGG-RVWDNDD 215 (421)
T ss_dssp EEEEEEESCCHHHHHHHHHTTEEEEEE----ECEEETTEE-ECCHHHHHHHHHH--TTEEEEEEESSBTTTT-BCCCHHH
T ss_pred CEEEECCCCcHHHHHHHHHCCCEEEec----cccccCCCe-eeCHHHHHHHhhc--cCCeEEEECCCCCCCC-CcCCHHH
Confidence 578999999998665544433211000 110000000 1389999999985 4799999999999999 5678889
Q ss_pred HHHHHHHHHHcCCEEEEehhhhccccccccc-ccc-----cCCCCCcEEEeccccc-CCcccceeeEeC-HHHHhhcCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD-----WEEVRPDMVILGKALG-GGVIPVSAVLAD-KEVMLCIQPG 154 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~-----~~~~~~d~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~ 154 (306)
|++|+++|++||++||+||+|+++++.|..+ .+. ..+..+++.|+||+++ +|+ |+|+++++ +++++.+...
T Consensus 216 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-~~G~~~~~~~~l~~~~~~~ 294 (421)
T 3l8a_A 216 LIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGT-KNSFAIIQNESLRRKFQYR 294 (421)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGG-CCEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchh-heEeEEcCCHHHHHHHHHH
Confidence 9999999999999999999999987777422 111 1234456789999998 899 99999998 8888877654
Q ss_pred C-ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhh
Q 021893 155 E-HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVS 230 (306)
Q Consensus 155 ~-~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~ 230 (306)
. ....++.++++++++.++++...+ ++..++++++.+++++.|++. + .+...++ .+.+.|+.++.. ..+
T Consensus 295 ~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~i~~~~~~~~~~~~v~~~~~--~~~ 367 (421)
T 3l8a_A 295 QLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAK----T-KIKVMEPEGTYLVWLDFSAY--AIA 367 (421)
T ss_dssp HHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----C-SCEEECCSBSSEEEEECGGG--TCC
T ss_pred HHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC----C-CceEeCCCeeEEEEEecccc--CCC
Confidence 3 334457899999999998875322 345666777777777777765 2 2223344 444456777641 134
Q ss_pred HHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 231 AYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 231 ~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..++.+.|+++ ||.+.++ +.+++|++++ +++++|++++++|+++++
T Consensus 368 ~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 368 QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 56889999855 9999873 3689999966 689999999999998875
No 41
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=3.2e-26 Score=209.62 Aligned_cols=231 Identities=14% Similarity=0.116 Sum_probs=180.3
Q ss_pred cccccCCCHHHHHHHHHhcCC-cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--ccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGD-QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLAS 115 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~ 115 (306)
++.++++|+++|+++++++++ ++++|++++++|++|.+.+ +++|.++|++||++||+||+|+++ +..|..+ .
T Consensus 172 ~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~-~ 246 (427)
T 2w8t_A 172 IVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGV-Y 246 (427)
T ss_dssp EEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCH-H
T ss_pred eEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-H
Confidence 356778999999999986543 7899999999999999887 999999999999999999999963 3334433 3
Q ss_pred ccCCCCCc----EEEecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHH
Q 021893 116 DWEEVRPD----MVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRD-EKLAERSAH 188 (306)
Q Consensus 116 ~~~~~~~d----~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~ 188 (306)
+.+++.++ +.|+||.++ . +.||+++++++++.+.... ...+.+.+++.++++.++++.+.. ++..+++++
T Consensus 247 ~~~~~~~~~di~~~s~sK~~g--~-~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~ 323 (427)
T 2w8t_A 247 EAQGLEGQIDFVVGTFSKSVG--T-VGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWS 323 (427)
T ss_dssp HHTTCTTCCSEEEEESSSTTC--S-CCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred hhcCCCcCCcEEEecchhhhc--c-CCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 33444444 669999996 3 5588999999998887642 223456788888888899998865 567889999
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCC
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLS 260 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~ 260 (306)
+++++++.|++++ + ....+. .|.++++.+++ .....++++.|+++||.+.++. .+++|++++..
T Consensus 324 ~~~~l~~~L~~~g--~---~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~ 395 (427)
T 2w8t_A 324 NARALHGGLKAMG--F---RLGTETCDSAIVAVMLED---QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAE 395 (427)
T ss_dssp HHHHHHHHHHHHT--C---EESCSSCCSSEEEEEESS---HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHcC--C---cccCCCCCCCEEEEEECC---HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCC
Confidence 9999999999872 2 111123 67788888764 4567789999999999998642 36899999988
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893 261 ISSNELQEGSKALHDVLELDLPKMRK 286 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~~~~~~~~~ 286 (306)
+++++++.++++|+++++ ++.+.+.
T Consensus 396 ~t~e~i~~~~~~l~~~l~-~~~~~~~ 420 (427)
T 2w8t_A 396 HTPAQIQTVLGMFQAAGR-AVGVIGL 420 (427)
T ss_dssp CCHHHHHHHHHHHHHHHH-HHTCC--
T ss_pred CCHHHHHHHHHHHHHHHH-HhCcccc
Confidence 999999999999999999 8766443
No 42
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.94 E-value=1.9e-26 Score=207.15 Aligned_cols=223 Identities=17% Similarity=0.190 Sum_probs=168.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.|+++++ +++++|++++++|++|.. .+.+.+++|.++|++||+++|+||+|+++++.+.....+.++..+++.
T Consensus 143 d~~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~ 218 (375)
T 3op7_A 143 DLEKLRQLIR---PTTKMICINNANNPTGAV-MDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVN 218 (375)
T ss_dssp CHHHHHHHCC---TTCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEE
T ss_pred CHHHHHHhhc---cCCeEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEe
Confidence 8999999997 578899999999999965 579999999999999999999999999875543322234455567788
Q ss_pred Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHh
Q 021893 126 ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 126 s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~ 202 (306)
|+||.++ +|+ |+||+++++++++.+.......+++.+++.+.++..+++.... ++..++++++.+.+.+.|++
T Consensus 219 s~sK~~~~~G~-r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~--- 294 (375)
T 3op7_A 219 SLSKTYSLPGI-RIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEE--- 294 (375)
T ss_dssp ESSSSSSCGGG-CCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred EChhhcCCccc-ceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 9999998 898 9999999999999998877777888889988888888875432 22344445555555555554
Q ss_pred hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.+......+..|.+.++.++. ..+..++++.|+ ++||.+.|+. ++++|+++ ..+.+++++++++|++++
T Consensus 295 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~i~~~l~~l~~~l 368 (375)
T 3op7_A 295 -EPLVSYIRPAVVSTSFVKIAV---DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGF--ACEQETLIKGLEKLSQFL 368 (375)
T ss_dssp -CTTEEECCCSSSSCEEEEECC---SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECC--CSCHHHHHHHHHHHHHHH
T ss_pred -CCCceEecCCCeEEEeEEcCC---CCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEe--cCCHHHHHHHHHHHHHHH
Confidence 222322333455666776664 345678888885 7899998753 68999994 456699999999999999
Q ss_pred hhhcCC
Q 021893 278 ELDLPK 283 (306)
Q Consensus 278 ~~~~~~ 283 (306)
+ ++.+
T Consensus 369 ~-~~~~ 373 (375)
T 3op7_A 369 R-RFDK 373 (375)
T ss_dssp G-GGC-
T ss_pred H-HHhh
Confidence 9 7653
No 43
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.94 E-value=1.5e-25 Score=204.98 Aligned_cols=261 Identities=15% Similarity=0.164 Sum_probs=185.7
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----cccccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----HLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGV 75 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~ 75 (306)
+.+|++...+||+....+.......... |..+. +....+ .|++.|++.++ +++++|++++++|++|.
T Consensus 125 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~ 197 (429)
T 1yiz_A 125 GDEVIIIEPFFDCYEPMVKAAGGIPRFI----PLKPNKTGGTISSADWVLDNNELEALFN---EKTKMIIINTPHNPLGK 197 (429)
T ss_dssp TCEEEEEESCCTTHHHHHHHTTCEEEEE----ECBCCCSSSSEEGGGCBCCHHHHHHHCC---TTEEEEEEESSCTTTCC
T ss_pred CCEEEEcCCCchhHHHHHHHcCCEEEEE----eCCcccccccccccCcccCHHHHHHHhc---cCceEEEECCCCCCCCc
Confidence 3578899999988665443322211110 11110 000122 48999999886 57899999999999996
Q ss_pred ccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccc----cCCCCCcEEEeccccc-CCcccceeeEeCHHHHh
Q 021893 76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD----WEEVRPDMVILGKALG-GGVIPVSAVLADKEVML 149 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~----~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~ 149 (306)
+ .+++.+++|.++|++||+++|+||+|+++.+.|..+ ++. ..+..+++.|+||.++ +|+ |+||+++++++++
T Consensus 198 ~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~-r~G~~~~~~~~~~ 275 (429)
T 1yiz_A 198 V-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGW-KIGWAYGPEALLK 275 (429)
T ss_dssp C-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG-CCEEEESCHHHHH
T ss_pred c-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCc-ceEEEEeCHHHHH
Confidence 6 578999999999999999999999999876655421 121 2334455779999999 899 9999999999988
Q ss_pred hcCCCCccCCCCCCHHHHHHHHHHHHH-----Hhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893 150 CIQPGEHGSTFGGNPLASAVAIASLDV-----IRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220 (306)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~aa~~al~~-----~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i 220 (306)
.+.......+++.+++++.++.++++. ... ++..++++++++.+.+.|++.. .....+..|.++++
T Consensus 276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~g~~~~~ 350 (429)
T 1yiz_A 276 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVG-----MNPTVPQGGYFMVA 350 (429)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEECSBSSEEEE
T ss_pred HHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccCCCcceEEEE
Confidence 877655556788899999888888887 321 2345566666777777776651 33333446778898
Q ss_pred EEecCC---------ChhhHHHHHHHHH-HCCceeccCC-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 221 EFDKTA---------LPVSAYDICLKMK-ERGILAKPTH-----------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 221 ~~~~~~---------~~~~~~~~~~~l~-~~Gi~~~~~~-----------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++... ...+..++++.|+ ++||.+.|+. .+++|++++ .++++|++++++|+++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 351 DWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp ECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred EcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence 887420 0035678888887 7899998741 579999975 589999999999998876
No 44
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.93 E-value=1e-25 Score=207.46 Aligned_cols=226 Identities=17% Similarity=0.227 Sum_probs=168.3
Q ss_pred CCHHHHHHHHH----hcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----ccc
Q 021893 45 GDITALEKIFK----ESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LAS 115 (306)
Q Consensus 45 ~d~~~le~~i~----~~~~~~~~v~-v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~ 115 (306)
.|++.|+++++ +. .++++|+ ++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. ..+
T Consensus 198 ~d~~~L~~~l~~~~~~~-~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~ 275 (448)
T 3aow_A 198 MKVEILEEKLKELKSQG-KKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL 275 (448)
T ss_dssp ECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGG
T ss_pred CCHHHHHHHHhhhhccC-CCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhc
Confidence 38999999997 32 3688875 55678888865 67999999999999999999999999987655542 222
Q ss_pred ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h--ccHHHHHHHHHH
Q 021893 116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D--EKLAERSAHLGE 191 (306)
Q Consensus 116 ~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~--~~~~~~~~~~~~ 191 (306)
+..+..+++.||||.+++|+ |+||+++++++++.+.......+++.+++++.++.++++... . ++..++++++++
T Consensus 276 ~~~~~vi~~~S~SK~~~~Gl-riG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 354 (448)
T 3aow_A 276 DNEGRVIYLGTFSKILAPGF-RIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRD 354 (448)
T ss_dssp CTTSCEEEEEESTTTTCGGG-CCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEccchhhccccc-cEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 33344556779999999999 999999999999887754444556678888888888886421 1 223455556666
Q ss_pred HHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCC
Q 021893 192 ELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSIS 262 (306)
Q Consensus 192 ~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t 262 (306)
.+.+.|++. +| +.....+..|+++|+.++. ..+..++++.|+++||.+.|+ ..+++|++++. .+
T Consensus 355 ~l~~~L~~~---~~~g~~~~~p~~g~~~~v~~~~---~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~ 427 (448)
T 3aow_A 355 AMLEALEEF---MPEGVKWTKPEGGMFIWVTLPD---GIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VD 427 (448)
T ss_dssp HHHHHHHHH---CCTTCEECCCSBSSEEEEECST---TCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SC
T ss_pred HHHHHHHHh---CCCCeEEeCCCccEEEEEEcCC---CCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CC
Confidence 666666654 22 1222234567888988864 345778999999999999874 36799999765 48
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 021893 263 SNELQEGSKALHDVLELDL 281 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~~~~ 281 (306)
+++|++++++|+++++ ++
T Consensus 428 ~e~i~~~~~~L~~~l~-~~ 445 (448)
T 3aow_A 428 EDKIMEGIKRLAETIK-EE 445 (448)
T ss_dssp THHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHH-HH
Confidence 9999999999999988 54
No 45
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=2.4e-25 Score=201.38 Aligned_cols=227 Identities=21% Similarity=0.292 Sum_probs=178.8
Q ss_pred cccccCCCHHHHHHHHHhcCC---cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-ccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGD---QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRML 113 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~---~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~ 113 (306)
+..+|+.|+++|++.++++.+ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++ +..+...
T Consensus 151 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~ 226 (399)
T 3tqx_A 151 RYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHAVGFIGENGRGT 226 (399)
T ss_dssp EEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCH
T ss_pred eeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 355677899999999997543 7999999999999998887 9999999999999999999995 54 3333322
Q ss_pred ccccCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHH-h-hccHHHH
Q 021893 114 ASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVI-R-DEKLAER 185 (306)
Q Consensus 114 ~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~-~-~~~~~~~ 185 (306)
.+.+++ .+|++ |+||.++ |+ +.||+++++++++.+..... ..+.+.+++.++++.++++.. . .++..++
T Consensus 227 -~~~~~~~~~~di~~~s~sK~~~-g~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 303 (399)
T 3tqx_A 227 -PEYCGVADRVDILTGTLGKALG-GA-SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQ 303 (399)
T ss_dssp -HHHHTCTTCCSEEEEESSSSSC-SS-CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred -HHhhCCCCCCcEEEecchHhcc-cC-ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHH
Confidence 334444 56766 8999999 66 77999999999888765322 223366788888888888877 3 2557888
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCC
Q 021893 186 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPP 258 (306)
Q Consensus 186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~ 258 (306)
++++.+++++.|++.+.. ..+..|.++++.++. ..+..++++.|.++||.+.+. +.+++|++++
T Consensus 304 ~~~~~~~l~~~L~~~g~~------~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~ 374 (399)
T 3tqx_A 304 LQENSRYFRAGMEKLGFQ------LVPGNHPIIPVMLGD---AQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMS 374 (399)
T ss_dssp HHHHHHHHHHHHHHHTCC------BCCCSSSEEEEEEEC---HHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCC------cCCCCCCEEEEEeCC---HHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEee
Confidence 999999999999987311 225677888888874 456789999999999999843 3469999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 259 LSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 259 ~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
..++++++++++++|+++++ ++.
T Consensus 375 ~~~~~~~i~~~~~~l~~~~~-~~~ 397 (399)
T 3tqx_A 375 AVHTQQQLDRAIEAFGQVGK-KLG 397 (399)
T ss_dssp TTCCHHHHHHHHHHHHHHHH-HTT
T ss_pred cCCCHHHHHHHHHHHHHHHH-Hhc
Confidence 88999999999999999998 653
No 46
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.93 E-value=3.1e-25 Score=202.88 Aligned_cols=266 Identities=14% Similarity=0.094 Sum_probs=182.4
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhcC---------C
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKESG---------D 59 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~~---------~ 59 (306)
.|++.+|+.++...++.++..+....-...|.+++ ++.+|. .|++.|++++++++ +
T Consensus 110 ~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~ 189 (425)
T 2r2n_A 110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKN 189 (425)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSC
T ss_pred cEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCC
Confidence 56666666666555555554432222222233322 122332 37999999998432 3
Q ss_pred cEEEEEEc-cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----cccccCCCCCcEEEecccccCC
Q 021893 60 QIAGFLFE-PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWEEVRPDMVILGKALGGG 134 (306)
Q Consensus 60 ~~~~v~v~-~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~~~~~~~~d~~s~sK~~~~G 134 (306)
++++|+++ .++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. ..++..+....+.|+||.+++|
T Consensus 190 ~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G 268 (425)
T 2r2n_A 190 TPKFLYTVPNGNNPTGNS-LTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG 268 (425)
T ss_dssp CCSEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST
T ss_pred CceEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc
Confidence 57788775 578888865 57999999999999999999999999987555532 2222223334566999999999
Q ss_pred cccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 021893 135 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE-------KLAERSAHLGEELRQHLFKIQQQFPNY 207 (306)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~-------~~~~~~~~~~~~l~~~L~~~~~~~~~~ 207 (306)
+ |+||+++++++++.+.......+++.+++++.++.++++.+.++ +..++++++++.+.+.|++. +++.
T Consensus 269 l-RiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~ 344 (425)
T 2r2n_A 269 L-RIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKW---LTGL 344 (425)
T ss_dssp T-CCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CSSS
T ss_pred c-ceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCC
Confidence 9 99999999999888776555566778999999988888764322 23344445555555555543 2222
Q ss_pred e-eeEEEeeeEEEEEEecCCChhhHHH-HHHHHHHCCceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 208 V-KEVRGRGLFNAVEFDKTALPVSAYD-ICLKMKERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 208 ~-~~~~~~g~~~~i~~~~~~~~~~~~~-~~~~l~~~Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
. ...+..|+++|+.++. ..+..+ +.+.|.++||.+.|+ +.+++|++++. .+++++++++++|+++
T Consensus 345 ~~~~~p~~g~~~~~~~~~---~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~ 420 (425)
T 2r2n_A 345 AEWHVPAAGMFLWIKVKG---INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQL 420 (425)
T ss_dssp EEECCCSBSSEEEEEETT---CSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHH
T ss_pred eEEeCCCceEEEEEEeCC---CCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHH
Confidence 2 2335678888998874 223344 578888999999874 24799999753 6999999999999998
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
++
T Consensus 421 l~ 422 (425)
T 2r2n_A 421 IK 422 (425)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 47
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=4.3e-25 Score=200.54 Aligned_cols=257 Identities=18% Similarity=0.164 Sum_probs=185.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CCHHHHHHHHH----hcCCcEEEEE-EccccCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFK----ESGDQIAGFL-FEPIQGE 72 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~i~----~~~~~~~~v~-v~~~~~~ 72 (306)
+.+|++...+||+....+...... +..+|. .|++.|+++++ +. +++++|+ ++.++|+
T Consensus 122 gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~d~~~l~~~l~~~~~~~-~~~~~v~~~~~~~np 187 (407)
T 2zc0_A 122 GDVVITENPSYINTLLAFEQLGAK-------------IEGVPVDNDGMRVDLLEEKIKELKAKG-QKVKLIYTIPTGQNP 187 (407)
T ss_dssp TCEEEEEESCCHHHHHHHHTTTCE-------------EEEEEEETTEECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTT
T ss_pred CCEEEEeCCChHHHHHHHHHcCCE-------------EEEcccCCCCCCHHHHHHHHHhhhccc-CCceEEEECCCCCCC
Confidence 357888888887754333221111 111221 48999999998 42 3678874 6677888
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc---CCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW---EEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~---~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+|.+ .+.+++++|.++|++||+++|+||+|+++.+.|.. .++.. .+...++.|+||.+++|+ |+||++++++++
T Consensus 188 tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~ 265 (407)
T 2zc0_A 188 MGVT-MSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGF-RIGWIIAEGEIL 265 (407)
T ss_dssp TCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTS-CCEEEECCHHHH
T ss_pred CCcC-CCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCc-ceEEEecCHHHH
Confidence 9965 57899999999999999999999999987655542 11222 223345669999999999 999999999998
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVI--R---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~--~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~ 223 (306)
+.+.......++..+++.+.++.++++.. . -++..++++++++++.+.|++... +.....+..|.++++.++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~ 342 (407)
T 2zc0_A 266 KKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP---NAEFTKPIAGMFVMFFLP 342 (407)
T ss_dssp HHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCT---TSCBCCCSBSSEEEEECS
T ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCEEecCCCcEEEEEEcC
Confidence 88765445556667888888888888753 2 244667777888888888876421 121222456778888876
Q ss_pred cCCChhhHHHHHHHHHHC-CceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 224 KTALPVSAYDICLKMKER-GILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~-Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
. +.+..++++.|.++ ||.+.++ ..+++|++++.. +++++++++++|+++++ ++.
T Consensus 343 ~---~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~-~~~ 405 (407)
T 2zc0_A 343 E---GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYK-EKF 405 (407)
T ss_dssp T---TCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHH-HHC
T ss_pred C---CCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH-HHh
Confidence 4 34577899999999 9999874 357999998765 89999999999999998 653
No 48
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.93 E-value=4.4e-25 Score=199.14 Aligned_cols=226 Identities=16% Similarity=0.181 Sum_probs=168.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccCC-CCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEE-VRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~~-~~~ 122 (306)
.|++.|++++++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+..... ..+
T Consensus 147 ~d~~~l~~~l~~--~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 223 (391)
T 3dzz_A 147 VNWADLEEKLAT--PSVRMMVFCNPHNPIGYA-WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAK 223 (391)
T ss_dssp CCHHHHHHHHTS--TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTG
T ss_pred ecHHHHHHHHhc--cCceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCcccc
Confidence 489999999974 478899888899999965 46788999999999999999999999988766642 2232222 125
Q ss_pred c----EEEeccccc-CCcccceeeEeC-HHHHhhcCCCCc-cCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHH
Q 021893 123 D----MVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEEL 193 (306)
Q Consensus 123 d----~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l 193 (306)
| +.|+||.++ +|+ |+||++++ +++++.+..... ...++.+++++.++.++++... .++..++++++.+++
T Consensus 224 d~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (391)
T 3dzz_A 224 NWVVSLISPSKTFNLAAL-HAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYA 302 (391)
T ss_dssp GGEEEEECSHHHHTCTTT-CCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeChhhccccch-hheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 5 568899998 899 99999997 888887765422 3445678888888888887632 134566667777777
Q ss_pred HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHH
Q 021893 194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNEL 266 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i 266 (306)
.+.|++. +++.....+..+.++++.++.. ..+..++++.|+ ++||.+.++ +.+++|++++ ++++++
T Consensus 303 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i 375 (391)
T 3dzz_A 303 REFLAKE---VPEVKVLDSNASYLAWVDISAL--GMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELV 375 (391)
T ss_dssp HHHHHHH---CTTSEECCCCBSSEEEEECGGG--CSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHH
T ss_pred HHHHHhh---CCCcEEeccCceEEEEEehhhc--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHH
Confidence 7777663 2223333345566677777641 246788999996 889999874 2489999965 689999
Q ss_pred HHHHHHHHHHHhhhcC
Q 021893 267 QEGSKALHDVLELDLP 282 (306)
Q Consensus 267 ~~~~~~l~~~l~~~~~ 282 (306)
++++++|+++++ ++.
T Consensus 376 ~~~l~~l~~~l~-~~~ 390 (391)
T 3dzz_A 376 IDGMQRLKQGVL-NLN 390 (391)
T ss_dssp HHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHHH-Hhh
Confidence 999999999998 654
No 49
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=1.1e-25 Score=205.90 Aligned_cols=261 Identities=18% Similarity=0.191 Sum_probs=184.6
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CCHHHHHHHHHhc-----CCcEEEEE-EccccCC
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKES-----GDQIAGFL-FEPIQGE 72 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~i~~~-----~~~~~~v~-v~~~~~~ 72 (306)
.+|++...+||+....+...... ++.+|. .|++.|++++++. +.++++|+ ++.++|+
T Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~np 200 (425)
T 1vp4_A 134 SYCVLDDPAYLGAINAFRQYLAN-------------FVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP 200 (425)
T ss_dssp CEEEEEESCCHHHHHHHHTTTCE-------------EEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred CEEEEeCCCcHHHHHHHHHcCCE-------------EEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCC
Confidence 56777777777755443322211 111121 4899999999851 13688874 6778888
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc---ccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS---DWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 148 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~---~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~ 148 (306)
+|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .++ +..+....+.|+||.+++|+ |+||++++++++
T Consensus 201 tG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~ 278 (425)
T 1vp4_A 201 AGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGL-RIGMVAGSKEFI 278 (425)
T ss_dssp TCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGG-CEEEEECCHHHH
T ss_pred CCCc-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEecccccccccc-ceEEEeeCHHHH
Confidence 8865 57899999999999999999999999987655542 122 22223334569999999999 999999999998
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHH--hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVI--RD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 224 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~--~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~ 224 (306)
+.+.......+++.+++++.++.++++.. .. ++..++++++++.+.+.|++.....+++....+..|.++|+.++.
T Consensus 279 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~ 358 (425)
T 1vp4_A 279 RKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE 358 (425)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCT
T ss_pred HHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCC
Confidence 88765444445667889998888888763 11 335566677777777777765221001222234567888888864
Q ss_pred CCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 225 TALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 225 ~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
..+..++++.|.++||.+.|+ ..+++|++++.. +++++++++++|+++++ ++.+
T Consensus 359 ---~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~-~~~~ 420 (425)
T 1vp4_A 359 ---GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVL-EYGK 420 (425)
T ss_dssp ---TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHH-HHHH
T ss_pred ---CCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH-HHHh
Confidence 234567899999999999874 357999998654 89999999999999998 6543
No 50
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=4e-25 Score=199.54 Aligned_cols=221 Identities=13% Similarity=0.132 Sum_probs=165.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccC-C---C
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWE-E---V 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~-~---~ 120 (306)
|++.|+++++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|. ..+...+ + .
T Consensus 149 d~~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T 1gd9_A 149 NVDELKKYVT---DKTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER 224 (389)
T ss_dssp CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred CHHHHHHhcC---cCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCC
Confidence 7999999987 468888888889999965 5788999999999999999999999998765554 2222221 1 2
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQ 195 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~ 195 (306)
...+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++++.+
T Consensus 225 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (389)
T 1gd9_A 225 TITVNGFSKTFAMTGW-RLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWK 303 (389)
T ss_dssp EEEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecChhhcCCccc-ceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHH
Confidence 223558999998 898 9999999999988877655555677888888888888875432 3345666777777777
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~ 268 (306)
.|++.+ .....+..|.++++.++.. +.+..++++.|+ ++||.+.++ +.+++|++++ .+++++++
T Consensus 304 ~L~~~g-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~ 374 (389)
T 1gd9_A 304 RLNEMG-----LPTVKPKGAFYIFPRIRDT--GLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA--TAYEKLEE 374 (389)
T ss_dssp HHHHTT-----CCCCCCCBTTEECCBCGGG--TCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC--SCHHHHHH
T ss_pred HHHHcC-----CeecCCCeeeEEEEeccCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHH
Confidence 777652 2122234566677766531 235678999998 899999875 2679999965 48999999
Q ss_pred HHHHHHHHHhhhc
Q 021893 269 GSKALHDVLELDL 281 (306)
Q Consensus 269 ~~~~l~~~l~~~~ 281 (306)
++++|+++++ +.
T Consensus 375 ~l~~l~~~~~-~~ 386 (389)
T 1gd9_A 375 AMDRMERVLK-ER 386 (389)
T ss_dssp HHHHHHHHHH-HT
T ss_pred HHHHHHHHHH-hc
Confidence 9999999988 54
No 51
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.93 E-value=1.2e-25 Score=201.91 Aligned_cols=223 Identities=16% Similarity=0.122 Sum_probs=164.9
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc-cc-ccc---ccCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RM-LAS---DWEE 119 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g-~~-~~~---~~~~ 119 (306)
.|+++|++++++ ++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.| .. ..+ +..+
T Consensus 138 ~d~~~l~~~l~~---~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 213 (377)
T 3fdb_A 138 INLHDVEKGFQA---GARSILLCNPYNPLGMV-FAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAAS 213 (377)
T ss_dssp CCHHHHHHHHHT---TCCEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHH
T ss_pred CCHHHHHHHhcc---CCCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCC
Confidence 489999999984 46777777779999965 578889999999999999999999999877666 21 111 1122
Q ss_pred CCCcEEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQ 195 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~ 195 (306)
..+++.|+||.++ +|+ |+||++. ++++++.+.......+++.+++++.++.++++.... ++..++++++.+++.+
T Consensus 214 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 292 (377)
T 3fdb_A 214 VCITITAPSKAWNIAGL-KCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLH 292 (377)
T ss_dssp HEEEEECSTTTTTCGGG-CCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeChHhccCcch-hheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 2355679999997 899 9998776 788888877655556678899999998888875322 3456677777777777
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~ 268 (306)
.|++.. +++....+..+.++|+.++... ...++++.|+++ ||.+.|+ ..+++|++++ .+++++++
T Consensus 293 ~L~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~--~~~e~i~~ 364 (377)
T 3fdb_A 293 EIPKRI---PGAKITPMQATYLMWIDFRDTT---IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA--TSREVLEE 364 (377)
T ss_dssp HHHHHS---TTCEECCCSBCSEEEEECTTSC---CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHH
T ss_pred HHHhhC---CCceEecCCeeEEEEEECcccC---CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC--CCHHHHHH
Confidence 777642 2233333445666678776421 124677888776 9999875 2689999965 58999999
Q ss_pred HHHHHHHHHhhhc
Q 021893 269 GSKALHDVLELDL 281 (306)
Q Consensus 269 ~~~~l~~~l~~~~ 281 (306)
++++|+++++ ++
T Consensus 365 ~l~~l~~~l~-~~ 376 (377)
T 3fdb_A 365 AIDRMAKAVS-HH 376 (377)
T ss_dssp HHHHHHHHHT-TC
T ss_pred HHHHHHHHHh-hc
Confidence 9999999988 54
No 52
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.8e-25 Score=201.22 Aligned_cols=219 Identities=16% Similarity=0.208 Sum_probs=167.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-----cCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-----WEE 119 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-----~~~ 119 (306)
.|+++|++.++ +++++|++++++|++|.+ .+++.+++|.++|++||+++|+||+|+++.+.|...++. .++
T Consensus 189 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 264 (447)
T 3b46_A 189 IDFEQFEKAIT---SKTKAVIINTPHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQ 264 (447)
T ss_dssp ECHHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHT
T ss_pred cCHHHHHHhhc---cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCC
Confidence 48999998886 578999999999999965 578999999999999999999999999876655321111 234
Q ss_pred CCCcEEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEEL 193 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l 193 (306)
..+.+.|+||.++ +|+ |+||+++ ++++++.+.......+++.+++.+.++.++++.... ++..++++++++.+
T Consensus 265 ~~i~i~S~sK~~~~~G~-riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l 343 (447)
T 3b46_A 265 LTLTVGSAGKSFAATGW-RIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIF 343 (447)
T ss_dssp TEEEEEEHHHHTTCTTS-CCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCchhcCCcch-hhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHH
Confidence 5566779999999 899 9999999 999988876544556777888998888888887632 23566777777888
Q ss_pred HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC------------hhhHHHHHHHHH-HCCceeccCC-----------
Q 021893 194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL------------PVSAYDICLKMK-ERGILAKPTH----------- 249 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~------------~~~~~~~~~~l~-~~Gi~~~~~~----------- 249 (306)
.+.|++++ .....+..|.++|+.++.... ..+..++++.|+ ++||.+.|+.
T Consensus 344 ~~~L~~~g-----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~ 418 (447)
T 3b46_A 344 TSIFDELG-----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAA 418 (447)
T ss_dssp HHHHHHHT-----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGG
T ss_pred HHHHHHCC-----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCC
Confidence 88887762 222335568888888764200 135668998887 5799998752
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 250 DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 250 ~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.+++|+++. .++++|++++++|++
T Consensus 419 ~~~iRls~~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 419 ENLLRFAVC--KDDAYLENAVERLKL 442 (447)
T ss_dssp TTEEEEECC--SCHHHHHHHHHHGGG
T ss_pred CCEEEEEEe--CCHHHHHHHHHHHHH
Confidence 689999965 589999999999876
No 53
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.93 E-value=6.6e-25 Score=199.61 Aligned_cols=221 Identities=14% Similarity=0.184 Sum_probs=172.1
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--cccccccccccc
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDW 117 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~ 117 (306)
..++++|+++||++++++ ++++|++++++|++|.+.+ +++|.++|++||++||+||+|++ +++.|..+. ..
T Consensus 168 ~~~~~~d~~~le~~l~~~--~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~-~~ 240 (409)
T 3kki_A 168 HPFMHNNCDHLRMLIQRH--GPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGAGLL-AE 240 (409)
T ss_dssp EEECTTCHHHHHHHHHHH--CSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH-HH
T ss_pred EEecCCCHHHHHHHHHhc--CCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCcch-hh
Confidence 445668999999999964 4689999999999998887 99999999999999999999986 666665442 33
Q ss_pred CCC--CCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHH
Q 021893 118 EEV--RPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLG 190 (306)
Q Consensus 118 ~~~--~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~ 190 (306)
.++ .+|+ .|+||+++++ .|++++++++++.+...... .+...+++.++++.++++.+.. +++.+++++++
T Consensus 241 ~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~ 317 (409)
T 3kki_A 241 LGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMA 317 (409)
T ss_dssp HTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 333 3455 6899999854 37899999888776542221 1223577888888888988765 45777888889
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCH
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISS 263 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~ 263 (306)
+++++.|+++. + .+.+.+.++++.++. .....++++.|+++||.+.+ .+.+++|++++..+++
T Consensus 318 ~~l~~~L~~~g-----~--~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~ 387 (409)
T 3kki_A 318 RKLRIGLSQLG-----L--TIRSESQIIGLETGD---ERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVND 387 (409)
T ss_dssp HHHHHHHHTTT-----C--CCCCSSSEEEEEEES---HHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCH
T ss_pred HHHHHHHHHcC-----C--ccCCCCCEEEEEeCC---HHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCH
Confidence 99998888763 1 122577888888874 44577899999999999853 3467999999989999
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 021893 264 NELQEGSKALHDVLELDL 281 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~ 281 (306)
+++++++++|+++++ ..
T Consensus 388 e~i~~~~~~l~~~l~-~~ 404 (409)
T 3kki_A 388 EQIAKIIEVCSDAVN-YG 404 (409)
T ss_dssp HHHHHHHHHHHHHHH-HS
T ss_pred HHHHHHHHHHHHHHh-cC
Confidence 999999999999998 53
No 54
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.92 E-value=7.5e-26 Score=205.33 Aligned_cols=223 Identities=18% Similarity=0.219 Sum_probs=161.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc-----CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW-----EE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~-----~~ 119 (306)
|++.|++.+++ ++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|..+ .+.. .+
T Consensus 168 d~~~l~~~l~~---~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~ 243 (407)
T 3nra_A 168 DLTGLEEAFKA---GARVFLFSNPNNPAGVV-YSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAE 243 (407)
T ss_dssp CHHHHHHHHHT---TCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGG
T ss_pred CHHHHHHHHhh---CCcEEEEcCCCCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCC
Confidence 89999999984 67777777778999965 578999999999999999999999999876665433 1222 22
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
..+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++++++.
T Consensus 244 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 322 (407)
T 3nra_A 244 NVVTIMGPSKTESLSGY-RLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHV 322 (407)
T ss_dssp GEEEEECSSSTTCCGGG-CCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeCcccccCCCee-eEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 2344668999999 899 9999999999988877655555666777777776666642111 22344555555666655
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEG 269 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~ 269 (306)
|+++ +++....+..|.++++.++.. ..+..++++.|++ +||.+.++ ..+++|++++ .++++++++
T Consensus 323 L~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~ 394 (407)
T 3nra_A 323 LRGC----EGVFARTPQAGSYLFPRLPKL--AVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS--QDHEAAVAA 394 (407)
T ss_dssp HHTS----TTCBCCCCSBSSEECCBCCCB--SSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC--SCHHHHHHH
T ss_pred HhcC----CCceeccCCeeEEEEEeCCCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC--CCHHHHHHH
Confidence 5543 222222344567777776641 2457789999976 59999864 3689999976 489999999
Q ss_pred HHHHHHHHhhhcC
Q 021893 270 SKALHDVLELDLP 282 (306)
Q Consensus 270 ~~~l~~~l~~~~~ 282 (306)
+++|+++++ ++.
T Consensus 395 ~~~l~~~~~-~~~ 406 (407)
T 3nra_A 395 ARRIVTLVE-RYR 406 (407)
T ss_dssp HHHHHHHHH-HHB
T ss_pred HHHHHHHHH-Hhh
Confidence 999999998 653
No 55
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.92 E-value=4.3e-25 Score=200.64 Aligned_cols=255 Identities=13% Similarity=0.105 Sum_probs=180.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCC-CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
.+|++...+||+....+.......... |..+ +. ..|+++|++.++ +++++|+++.++|++|.+ .+.+
T Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~----~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~ 201 (404)
T 2o1b_A 134 DYVLLPDPGYTDYLAGVLLADGKPVPL----NLEPPHY----LPDWSKVDSQII---DKTKLIYLTYPNNPTGST-ATKE 201 (404)
T ss_dssp CEEEEEESCCSSHHHHHHHTTCEEEEE----ECCTTTC----CCCGGGSCHHHH---HHEEEEEECSSCTTTCCC-CCHH
T ss_pred CEEEEcCCCchhHHHHHHHCCCEEEEe----ccCcccC----cCCHHHHHHhhc---cCceEEEEcCCCCCCCcc-CCHH
Confidence 578888888888665443322211100 1111 10 147889999887 468899888888889965 5789
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccC----CCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCc
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE----EVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEH 156 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~ 156 (306)
.+++|.++|++||+++|+||+|+++.+.|...+.... +..+.+.|+||.++ +|+ |+||+++++++++.+.....
T Consensus 202 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~~~ 280 (404)
T 2o1b_A 202 VFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGF-RVGFAVGNKDMIQALKKYQT 280 (404)
T ss_dssp HHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGG-CCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchh-heEeEecCHHHHHHHHHHHh
Confidence 9999999999999999999999987554532211111 22345669999998 899 99999999999888765444
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHH
Q 021893 157 GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI 234 (306)
Q Consensus 157 ~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~ 234 (306)
..+++.+++++.++.++++.... ++..++++++++.+.+.|++.. +....+..|.++|+.++. ..+..++
T Consensus 281 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~g~~~~~~~~~---~~~~~~l 352 (404)
T 2o1b_A 281 HTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-----LPFVHAKGGIYVWLETPP---GYDSEQF 352 (404)
T ss_dssp HHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEECCCBSSEEEEECCT---TCCHHHH
T ss_pred hccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC-----CeecCCCcceEEEEeCCC---CCCHHHH
Confidence 45667888998888888876311 3345666777777777777651 222223456678888763 3456788
Q ss_pred HHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 235 CLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 235 ~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++.|+ ++||.+.++ ..+++|++++. +++++++++++|+++++ ++
T Consensus 353 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~-~~ 403 (404)
T 2o1b_A 353 EQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAY-LY 403 (404)
T ss_dssp HHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGG-GG
T ss_pred HHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHH-hh
Confidence 99987 579999875 25799999764 78899999999998887 54
No 56
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=2.9e-24 Score=194.70 Aligned_cols=226 Identities=22% Similarity=0.316 Sum_probs=176.6
Q ss_pred ccccCCCHHHHHHHHHhcCC---cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccc-ccccccc
Q 021893 40 LKVDFGDITALEKIFKESGD---QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLA-RSGRMLA 114 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~---~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~-~~g~~~~ 114 (306)
..++..|+++|++.++++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ |+. +.|..+
T Consensus 154 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~- 228 (401)
T 1fc4_A 154 YRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGRGS- 228 (401)
T ss_dssp EEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCH-
T ss_pred EEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECcccccccCCCCCcc-
Confidence 45567799999999986422 6889999999999998887 9999999999999999999995 773 345432
Q ss_pred cccCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHH
Q 021893 115 SDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRD-EKLAERSA 187 (306)
Q Consensus 115 ~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~ 187 (306)
.+..++ ..|++ |+||.++|+. . ||+++++++++.+.... ...+++.+++.++++.++++.+.. ++..++++
T Consensus 229 ~~~~~~~~~~di~~~s~sK~~~~~~-g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 306 (401)
T 1fc4_A 229 HEYCDVMGRVDIITGTLGKALGGAS-G-GYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLW 306 (401)
T ss_dssp HHHTTCTTCCSEEEEESSSTTCSSS-C-EEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCCcCCcEEEecchhhccCCC-C-EEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 222222 23655 8999997665 4 88999999988776432 222557789999999999988764 45788899
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCC
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLS 260 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~ 260 (306)
++++++++.|++.. +. . .+..|.++++.++. ..+..++.+.|.++||.+.++. .+++|++++..
T Consensus 307 ~~~~~l~~~L~~~g--~~-~---~~~~~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~ 377 (401)
T 1fc4_A 307 ANARQFREQMSAAG--FT-L---AGADHAIIPVMLGD---AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAA 377 (401)
T ss_dssp HHHHHHHHHHHHTT--CC-B---CCSSSSEEEEEEEC---HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHcC--Cc-c---cCCCCCEEEEEcCC---hHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCC
Confidence 99999999998862 21 1 14678888888864 4567789999999999998742 35899999888
Q ss_pred CCHHHHHHHHHHHHHHHhhhcC
Q 021893 261 ISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++++++++++++|+++++ ++.
T Consensus 378 ~~~~~i~~~~~~l~~~~~-~~~ 398 (401)
T 1fc4_A 378 HTPEQITRAVEAFTRIGK-QLG 398 (401)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHHHH-HhC
Confidence 999999999999999998 764
No 57
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=2.1e-24 Score=197.92 Aligned_cols=226 Identities=19% Similarity=0.129 Sum_probs=158.9
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc----
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW---- 117 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~---- 117 (306)
|++.|+++++++ +.++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+++++.+..+. ...
T Consensus 174 d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 252 (435)
T 3piu_A 174 TETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT-MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKD 252 (435)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccc
Confidence 899999999862 2478999998889999965 5788899999999999999999999998655554321 111
Q ss_pred CCCC-----Cc----EEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----cc
Q 021893 118 EEVR-----PD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EK 181 (306)
Q Consensus 118 ~~~~-----~d----~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~ 181 (306)
.+++ ++ +.|+||.++ +|+ |+||+++ ++.+++.+.. ....+..+++++.++.+.++...- ++
T Consensus 253 ~~~d~~~~~~~~~i~i~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (435)
T 3piu_A 253 RNCDENSEVWQRVHVVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATK--MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAE 329 (435)
T ss_dssp -------CGGGGEEEEEESSSSSCCGGG-CEEEEEESCHHHHHHHHH--HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cccccccCCCCCEEEEEeeecccCCCce-eEEEEEeCCHHHHHHHHH--HhhcCCCCHHHHHHHHHHhcChHHHHHHHHH
Confidence 0111 22 569999998 999 9999999 5667666553 223345677777777766653321 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC---ChhhHHHHHHHHHHC-CceeccC------CCC
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---LPVSAYDICLKMKER-GILAKPT------HDT 251 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~------~~~ 251 (306)
..++++++.+++++.|++. ++.......|.++++.++... ......++++.|+++ ||.+.|+ +++
T Consensus 330 ~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 404 (435)
T 3piu_A 330 NHKRLKQRQKKLVSGLQKS-----GISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPG 404 (435)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----TCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTT
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCC
Confidence 3445555555666655543 233333445688898887421 011456889999888 9999873 468
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 252 IVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++|++++.. +++++++++++|+++++ ++.
T Consensus 405 ~iRi~~~~~-~~e~i~~~l~~l~~~l~-~~~ 433 (435)
T 3piu_A 405 WFRVCFANL-PERTLDLAMQRLKAFVG-EYY 433 (435)
T ss_dssp EEEEECSSS-CHHHHHHHHHHHHHHHH-HHC
T ss_pred EEEEEeeCC-CHHHHHHHHHHHHHHHH-HHh
Confidence 999997544 99999999999999998 664
No 58
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.92 E-value=2.2e-25 Score=202.90 Aligned_cols=222 Identities=11% Similarity=0.167 Sum_probs=165.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc----CCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW----EEV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~----~~~ 120 (306)
|++.|+++++ +++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+... .+.
T Consensus 161 d~~~l~~~i~---~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 236 (412)
T 2x5d_A 161 ELERAIRESI---PKPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDI 236 (412)
T ss_dssp HHHHHHHTEE---SCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGT
T ss_pred CHHHHHHhcc---cCceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCc
Confidence 5677777776 467778887778888865 57899999999999999999999999987655531 11211 233
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
...+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++++.+.|
T Consensus 237 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 315 (412)
T 2x5d_A 237 AVEFFTLSKSYNMAGW-RIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGL 315 (412)
T ss_dssp EEEEEECC-CCSCTTS-CCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccccCCccc-ceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 344669999998 899 9999999999988877544555677889999888888864321 345677778888888888
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChh---hHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV---SAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~---~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~ 267 (306)
++.. + ....+..|.++++.++. .. +..++++.|++ +||.+.++ +.+++|++++. ++++++
T Consensus 316 ~~~g--~---~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~ 385 (412)
T 2x5d_A 316 REAG--W---MVENPKASMYVWAKIPE---PYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLR 385 (412)
T ss_dssp HHHT--C---CCCCCSBSSEEEEECCT---TTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHH
T ss_pred HHCC--C---EecCCCeeeEEEEEcCC---ccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHH
Confidence 8762 2 11223356678888763 22 56789999975 69999875 25799999764 899999
Q ss_pred HHHHHHHHHHhhhcCC
Q 021893 268 EGSKALHDVLELDLPK 283 (306)
Q Consensus 268 ~~~~~l~~~l~~~~~~ 283 (306)
+++++|+++++ ++..
T Consensus 386 ~~l~~l~~~l~-~~~~ 400 (412)
T 2x5d_A 386 QAVRGIKAMFR-ADGL 400 (412)
T ss_dssp HHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHH-hcCC
Confidence 99999999999 7654
No 59
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.92 E-value=3.4e-25 Score=200.20 Aligned_cols=223 Identities=11% Similarity=0.131 Sum_probs=162.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc-CCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW-EEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~ 124 (306)
|+++|++. ++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.+....... .+....+
T Consensus 153 d~~~l~~~------~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~ 225 (391)
T 3h14_A 153 VPADFAGL------DLAGLMVASPANPTGTM-LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVI 225 (391)
T ss_dssp CHHHHTTS------CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEE
T ss_pred CHHHHHhc------CCeEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEE
Confidence 67777654 57788888889999965 4788899999999999999999999998766664332222 2233345
Q ss_pred EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh
Q 021893 125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQ 202 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~ 202 (306)
.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++.+.+.+.|++...
T Consensus 226 ~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 304 (391)
T 3h14_A 226 NSFSKYFSMTGW-RVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGF 304 (391)
T ss_dssp EESSSTTCCTTS-CCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EechhccCCccc-eeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 58999998 999 9999999999988877655566777888888888877762111 33456667777777777776521
Q ss_pred hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
.....+..+.++++.++.. ..+..++++.|+++ ||.+.++ ..+++|++++. +++++++++++|+
T Consensus 305 ----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~ 376 (391)
T 3h14_A 305 ----TRIAPPDGAFYVYADVSDL--TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLE 376 (391)
T ss_dssp ----CCBCCCCBTTEEEEECTTT--CSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHH
T ss_pred ----CcccCCCeeEEEEEecCcc--CCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 1112234457777777631 24677899998886 9999873 25799999654 8899999999999
Q ss_pred HHHhhhcCCCC
Q 021893 275 DVLELDLPKMR 285 (306)
Q Consensus 275 ~~l~~~~~~~~ 285 (306)
++++ +..+..
T Consensus 377 ~~~~-~~~~~~ 386 (391)
T 3h14_A 377 AFMQ-ARGEGH 386 (391)
T ss_dssp HHHH-HC----
T ss_pred HHHH-Hhcccc
Confidence 9999 776543
No 60
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.92 E-value=1.6e-25 Score=200.88 Aligned_cols=213 Identities=13% Similarity=0.180 Sum_probs=161.4
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC----CC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE----EV 120 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~----~~ 120 (306)
.|+++|++.++ +++++|++++++|++|.+.+ ++ |.++|++||+++|+||+|+++.+.|...+...+ +.
T Consensus 142 ~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 213 (370)
T 2z61_A 142 FTVESLEEALS---DKTKAIIINSPSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEK 213 (370)
T ss_dssp SSHHHHHHHCC---SSEEEEEEESSCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSS
T ss_pred CCHHHHHHhcc---cCceEEEEcCCCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCc
Confidence 68999999987 46888888889999998877 55 999999999999999999987555543222222 22
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-Hhh--ccHHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-IRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-~~~--~~~~~~~~~~~~~l~~~ 196 (306)
...+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++. ... ++..++++++++++.+.
T Consensus 214 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 292 (370)
T 2z61_A 214 TILINGFSKLYAMTGW-RIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKY 292 (370)
T ss_dssp EEEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecChhccCCccc-eEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 334559999998 898 9999999999988876654555667788888888888865 221 34566777788888888
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEG 269 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~ 269 (306)
|++.+ .....+..|.++++.++. +..++++.|+ ++||.+.++ +.+++|++++ +++++++++
T Consensus 293 L~~~g-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~ 360 (370)
T 2z61_A 293 VKDFG-----WEVNNPIGAYYVFPNIGE-----DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEG 360 (370)
T ss_dssp HHHTT-----CBCCCCCBTTEECCBCSS-----CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHH
T ss_pred HHHcC-----CeecCCCcceEEEEecCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHH
Confidence 87752 212223456667766652 4678999998 789999875 2679999976 699999999
Q ss_pred HHHHHHHHh
Q 021893 270 SKALHDVLE 278 (306)
Q Consensus 270 ~~~l~~~l~ 278 (306)
+++|+++++
T Consensus 361 ~~~l~~~l~ 369 (370)
T 2z61_A 361 LERIKEFLN 369 (370)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998875
No 61
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=4.4e-24 Score=195.27 Aligned_cols=262 Identities=12% Similarity=0.068 Sum_probs=179.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIP 78 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~ 78 (306)
+.+|++...+||+....+....+-.... -|...... + ..|+++|+++++++ ++++++|++++++|++|.+ .
T Consensus 132 gd~Vl~~~p~y~~~~~~~~~~~g~~~~~---v~~~~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~-~ 205 (428)
T 1iay_A 132 GDAFLVPSPYYPAFNRDLRWRTGVQLIP---IHCESSNN-F-KITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT-L 205 (428)
T ss_dssp TCEEEEESSCCTTHHHHTTTTTCCEEEE---ECCCTTTT-T-CCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-C
T ss_pred CCeEEEccCCCcchHHHHHHhcCCEEEE---eecCCccC-C-cCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc-C
Confidence 3578899999888654332222211100 01111000 0 13799999999852 3468888888888889865 5
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c---cccC----CCCCc----EEEeccccc-CCcccceeeEe-C
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A---SDWE----EVRPD----MVILGKALG-GGVIPVSAVLA-D 144 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~---~~~~----~~~~d----~~s~sK~~~-~G~~~~g~~~~-~ 144 (306)
+.+++++|.++|++||+++|+||+|+++.+.+..+ + .... ++.+| +.|+||.++ +|+ |+||+++ +
T Consensus 206 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Gl-r~G~~~~~~ 284 (428)
T 1iay_A 206 DKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGF-RVGIIYSFN 284 (428)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGG-CEEEEEESC
T ss_pred CHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCc-eEEEEEeCC
Confidence 89999999999999999999999999865544322 1 1111 12245 569999998 899 9999998 6
Q ss_pred HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893 145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219 (306)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~ 219 (306)
+++++.+... ...+..+++++.++.++++... . ++..++++++++++.+.|+++. ........|++++
T Consensus 285 ~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~g~~~~ 357 (428)
T 1iay_A 285 DDVVNCARKM--SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-----IKCLKNNAGLFCW 357 (428)
T ss_dssp HHHHHHHHHH--HTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCBCCCSSSSEEE
T ss_pred HHHHHHHHHH--HhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcccCCCeeEEEE
Confidence 8888776532 2235678888888887776532 1 3356667777777777777652 2111223678888
Q ss_pred EEEecCC---ChhhHHHHHHHHHHC-CceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 220 VEFDKTA---LPVSAYDICLKMKER-GILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 220 i~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.++... ......++++.|+++ ||.+.++. ++++|++++ ..+++++++++++|+++++
T Consensus 358 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 358 MDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp EECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred EechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHh
Confidence 8876411 012456789999987 99998752 579999986 5799999999999999987
No 62
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.92 E-value=9.5e-25 Score=199.15 Aligned_cols=221 Identities=16% Similarity=0.194 Sum_probs=164.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC----CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE----EV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~----~~ 120 (306)
|++.|+++++ +++++|++++++|++|.+. +++.+++|.++|++||+++|+||+|+++.+.|... ++... +.
T Consensus 163 d~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 238 (422)
T 3fvs_A 163 DPMELAGKFT---SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWER 238 (422)
T ss_dssp CHHHHHTTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred CHHHHHhhcC---CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCc
Confidence 7899998887 4789999999999999765 78899999999999999999999999876666422 22221 22
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-------hh--ccHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-------RD--EKLAERSAHLG 190 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-------~~--~~~~~~~~~~~ 190 (306)
.+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.. .. ++..+++++++
T Consensus 239 ~i~~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (422)
T 3fvs_A 239 TLTIGSAGKTFSATGW-KVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317 (422)
T ss_dssp EEEEEEHHHHHTCGGG-CCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHH
T ss_pred EEEEecchhccCCccc-eEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHH
Confidence 345568999998 899 99999999999888766555667788899999988888752 11 23455566666
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChh----------hHHHHHHHHHH-CCceeccC-----------
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV----------SAYDICLKMKE-RGILAKPT----------- 248 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~----------~~~~~~~~l~~-~Gi~~~~~----------- 248 (306)
+.+.+.|++. +.....+..|.++|+.+....... ...++++.+++ +||.+.|+
T Consensus 318 ~~l~~~L~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~ 392 (422)
T 3fvs_A 318 DHMIRSLQSV-----GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKH 392 (422)
T ss_dssp HHHHHHHHTT-----TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTT
T ss_pred HHHHHHHHHc-----CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCC
Confidence 6666666554 233345567888888776310000 04578887665 69998873
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.+++|+++ ..+++++++++++|+++++
T Consensus 393 ~~~~iRis~--~~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 393 FDHYIRFCF--VKDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp SCSEEEEEC--CCCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 368999995 4599999999999999887
No 63
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.92 E-value=1.7e-25 Score=201.08 Aligned_cols=217 Identities=16% Similarity=0.193 Sum_probs=159.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc---CCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW---EEV 120 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~---~~~ 120 (306)
.|++.|++.++ +++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|...+ ... .+.
T Consensus 146 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 221 (376)
T 2dou_A 146 ADLKAVPEGVW---REAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKER 221 (376)
T ss_dssp BCGGGSCHHHH---HHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGT
T ss_pred CCHHHHHHhhc---cCceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCc
Confidence 37889998887 468899888888899965 5789999999999999999999999998765553211 222 233
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L 197 (306)
.+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++.+.+.|
T Consensus 222 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 300 (376)
T 2dou_A 222 VVELFSLSKSYNLAGF-RLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEAL 300 (376)
T ss_dssp EEEEEEHHHHHTCGGG-CCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchhhcCChhh-eeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 345669999998 899 9999999999988877544445566788888888887764211 223445555555565555
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSK 271 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~ 271 (306)
++. + ....+..|.++++.++. ..+..++++.|+++||.+.++ ..+++|++++ .++++++++++
T Consensus 301 ~~~---~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~i~~~l~ 369 (376)
T 2dou_A 301 KGV---L---SLLPPRATMYLWGRLPE---GVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALV--RPLEELLEAAK 369 (376)
T ss_dssp TTT---S---EECCCCBSSEEEEECCT---TCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHH
T ss_pred HHh---c---CccCCCeeEEEEEECCC---CCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHH
Confidence 543 1 11223456778888764 345678999999999999875 2579999965 38999999999
Q ss_pred HHHHHH
Q 021893 272 ALHDVL 277 (306)
Q Consensus 272 ~l~~~l 277 (306)
+|++++
T Consensus 370 ~l~~~l 375 (376)
T 2dou_A 370 RIREAL 375 (376)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 998765
No 64
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.92 E-value=6.4e-25 Score=198.84 Aligned_cols=255 Identities=17% Similarity=0.145 Sum_probs=180.1
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CCHHHHHHHHHhcCCcEEEE-EEccccCCCCcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGF-LFEPIQGEAGVI 76 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~i~~~~~~~~~v-~v~~~~~~~G~~ 76 (306)
+.+|++...+||+....+...... +..+|. .|+++|++.++++ ++++| +++.++|++|.+
T Consensus 115 gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~~nptG~~ 179 (397)
T 2zyj_A 115 GSPVLLEAPSYMGAIQAFRLQGPR-------------FLTVPAGEEGPDLDALEEVLKRE--RPRFLYLIPSFQNPTGGL 179 (397)
T ss_dssp TCEEEEEESCCHHHHHHHHTTCCE-------------EEEEEEETTEECHHHHHHHHHHC--CCSCEEECCBSCTTTCCB
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCE-------------EEecCcCCCCCCHHHHHHHHhhc--CCeEEEECCCCcCCCCCc
Confidence 357888888888865444332221 111111 4899999999852 56676 467788889865
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC------CCCCcEEEecccccCCcccceeeEeCHHHHh
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE------EVRPDMVILGKALGGGVIPVSAVLADKEVML 149 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~------~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~ 149 (306)
.+.+.+++|.++|++||+++|+||+|+++.+.|.. .+...+ +....+.|+||.+++|+ |+||+++++++++
T Consensus 180 -~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~~ 257 (397)
T 2zyj_A 180 -TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGL-RVAFAVAHPEALQ 257 (397)
T ss_dssp -CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGG-CCEEEECCHHHHH
T ss_pred -CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccc-eeEEEecCHHHHH
Confidence 57899999999999999999999999987665542 222222 22234569999999999 9999999999988
Q ss_pred hcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecC
Q 021893 150 CIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKT 225 (306)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~ 225 (306)
.+.......+++.+++++.++.++++... .++..++++++.+.+.+.|++. ++ +.....+..|.++++.++.
T Consensus 258 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~g~~~~~~~~g~~~~~~~~~- 333 (397)
T 2zyj_A 258 KLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE---VPKEVRYTRPKGGMFVWMELPK- 333 (397)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH---SCTTSEECCCSBSSEEEEECST-
T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCeEEccCCccEEEEEEcCC-
Confidence 87654444455668888888877776421 1223455555666666666554 22 1222234567888888764
Q ss_pred CChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 226 ALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 226 ~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+.+..++++.|.++||.+.++ .++++|++++.. +++++++++++|+++++ ++
T Consensus 334 --~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~-~~ 393 (397)
T 2zyj_A 334 --GLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALK-GL 393 (397)
T ss_dssp --TCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHH-HH
T ss_pred --CCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHH-HH
Confidence 345778999999999999874 357999998764 89999999999999987 64
No 65
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.92 E-value=1.8e-24 Score=198.03 Aligned_cols=264 Identities=11% Similarity=0.085 Sum_probs=183.3
Q ss_pred cceEEEEecCCCCcccchhc-ccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893 2 QAIIVSCCGCFHGRTLAAIS-MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
+.+|++.+.+||+....+.. ...... .-|..+.. -..|+++|++++++++.++++++++.++|++|.+ .+.
T Consensus 137 gd~Vl~~~p~y~~~~~~~~~~~g~~~~----~~~~~~~~---~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~~~ 208 (430)
T 2x5f_A 137 DDTILLPEHNWGNYKLVFNTRNGANLQ----TYPIFDKD---GHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYT-PTH 208 (430)
T ss_dssp TCEEEEESSCCTHHHHHHTTTTCCEEE----EECCBCTT---SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCC-CCH
T ss_pred CCEEEEcCCcCccHHHHHHHhcCCeEE----EEeccCcc---CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCc-CCH
Confidence 35788888888886544433 222110 00111100 0247899999998754578888877779999964 689
Q ss_pred hHHHHHHHHHHH-----cCCEEEEehhhhccccccccc-----cccc-CCC---CCcEEEeccccc-CCcccceeeEe--
Q 021893 81 GYLKAVRDLCSK-----YNILMIADEIQSGLARSGRML-----ASDW-EEV---RPDMVILGKALG-GGVIPVSAVLA-- 143 (306)
Q Consensus 81 ~~l~~i~~l~~~-----~gi~li~De~~~g~~~~g~~~-----~~~~-~~~---~~d~~s~sK~~~-~G~~~~g~~~~-- 143 (306)
+.+++|.++|++ ||+++|+||+|+++.+.|..+ .++. .+. ...+.|+||.++ +|+ |+||+++
T Consensus 209 ~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~ 287 (430)
T 2x5f_A 209 KEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF-RVGFMTFGT 287 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEBC
T ss_pred HHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCC-CeEEEEEec
Confidence 999999999999 999999999999876655421 1211 222 223558999998 899 9999999
Q ss_pred -CHHHHhhcCCCCcc----CCCCCCHHHHHHHHHHHH-HH---hh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893 144 -DKEVMLCIQPGEHG----STFGGNPLASAVAIASLD-VI---RD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213 (306)
Q Consensus 144 -~~~~~~~~~~~~~~----~~~~~~~~~~~aa~~al~-~~---~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 213 (306)
++++++.+...... .+++.+++++.++.++++ .. .. ++..++++++++.+.+.|++..... ++....+.
T Consensus 288 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~ 366 (430)
T 2x5f_A 288 SDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFN 366 (430)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCC
T ss_pred CCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCC
Confidence 99988877654333 567788999999888887 32 11 2245556666666666665221121 23222334
Q ss_pred eeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 214 RGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.|.++|+.++ +.+..++++.|.+ +||.+.|+..+++|++++. .+++++++++++|+++++ ++
T Consensus 367 ~g~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~-~~ 429 (430)
T 2x5f_A 367 SGYFMAIKVH----DVDPEALRKHLIDKYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAID-DL 429 (430)
T ss_dssp BSSEEEEEES----SSCHHHHHHHHHHHHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHH-HH
T ss_pred ceEEEEeCCC----CCCHHHHHHHHHHhCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHH-hc
Confidence 5667888876 2356789999998 8999999877899999764 589999999999999987 54
No 66
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.92 E-value=6.6e-25 Score=201.09 Aligned_cols=219 Identities=12% Similarity=0.118 Sum_probs=167.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc---------cccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM---------LASD 116 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~---------~~~~ 116 (306)
|++.|+++++. +++++|+++.++|++|.+ .+.+.+++|.++|++||++||+||+|+++...+.. ..+.
T Consensus 170 d~~~l~~~l~~--~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
T 3g0t_A 170 LREKLESYLQT--GQFCSIIYSNPNNPTWQC-MTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVA 246 (437)
T ss_dssp HHHHHHHHHTT--TCCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGG
T ss_pred CHHHHHHHHhc--CCceEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccC
Confidence 78999999943 467788777778999865 57888999999999999999999999975443321 1121
Q ss_pred c-CCCCCcEEEeccccc-CCcccceeeEeCHHHHh-h-----------------cCCCCccCCCCCCHHHHHHHHHHHHH
Q 021893 117 W-EEVRPDMVILGKALG-GGVIPVSAVLADKEVML-C-----------------IQPGEHGSTFGGNPLASAVAIASLDV 176 (306)
Q Consensus 117 ~-~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~aa~~al~~ 176 (306)
. .+....+.|+||.++ +|+ |+||+++++++++ . +.......+++.+++++.++.++++.
T Consensus 247 ~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 325 (437)
T 3g0t_A 247 NYTDNYILALSSSKAFSYAGQ-RIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA 325 (437)
T ss_dssp GTCSCEEEEEESTTTTSCGGG-CCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCccCCCCccc-eeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC
Confidence 1 333344669999999 899 9999999999988 7 66544555677889999999998887
Q ss_pred Hh-----hccHHHHHHHHHHHHHHHHHHHHhhCCCceee------EE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCce
Q 021893 177 IR-----DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE------VR-GRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244 (306)
Q Consensus 177 ~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~ 244 (306)
.. .++..++++++.+.+++.|++++ .... .+ ..+.++++.++ ..+..++++.|.++||.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gi~ 396 (437)
T 3g0t_A 326 CNDGEYNFRDSVIEYGRKARIMKKMFLDNG-----FNIVYDKDGNEPLADGFYFTVGYK----GMDSSKLIEKFVRYGMC 396 (437)
T ss_dssp HHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-----EEESSCEETTEECCSSSEEEEEET----TCCHHHHHHHHHHTTEE
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CEEeccccCCCCCceeEEEEEecC----CCCHHHHHHHHHHcCeE
Confidence 65 23456777777777777777651 2223 24 67888888876 24678899999999999
Q ss_pred eccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 245 AKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 245 ~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.++. .+++|++++. .+++++++++++|+++++
T Consensus 397 v~~~~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 397 AITLKTTGSKRNEAMRICTSL-LPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp CEESTTTTCCCTTCEEEECSS-SCGGGHHHHHHHHHHHHH
T ss_pred EeeccccCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 98763 2789999874 499999999999998876
No 67
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.92 E-value=2.1e-24 Score=194.68 Aligned_cols=220 Identities=15% Similarity=0.119 Sum_probs=161.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-----C
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-----E 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-----~ 119 (306)
|+++|+++++ + ++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|... .+... +
T Consensus 154 d~~~l~~~l~---~-~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 228 (391)
T 4dq6_A 154 DYEDIENKIK---D-VKLFILCNPHNPVGRV-WTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEK 228 (391)
T ss_dssp CHHHHHHHCT---T-EEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHH
T ss_pred eHHHHHHHhh---c-CCEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccC
Confidence 8999999997 3 8888888889999965 578889999999999999999999999876666422 11111 1
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCH-HHHhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADK-EVMLCIQPGE-HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
....+.|+||.++ +|+ |+||+++++ ++++.+.... ...+++.+++++.++.++++.... ++..++++++.+.++
T Consensus 229 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 307 (391)
T 4dq6_A 229 NTITCMAPTKTFNIAGL-QSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAI 307 (391)
T ss_dssp TEEEEECSHHHHTCGGG-CCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEechhhccCccc-ceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 2234568999998 898 999999875 8877776542 234556788898888888875321 334556666666666
Q ss_pred HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893 195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~ 267 (306)
+.|++. ++++....+..+.+.|+.++.. ..+..++++.|.++ ||.+.++ +.+++|++++ +++++++
T Consensus 308 ~~l~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~ 380 (391)
T 4dq6_A 308 KYINEN---MPKLKVRKPEGTYLLWVDFSAL--GLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLE 380 (391)
T ss_dssp HHHHHH---CTTSEECCCSBSSEEEEECGGG--CCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHH
T ss_pred HHHHhh---CCCCEecCCCccEEEEEEhhhc--CCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHH
Confidence 666653 2223333344556666777641 23678899999999 9999874 3589999965 7899999
Q ss_pred HHHHHHHHHHh
Q 021893 268 EGSKALHDVLE 278 (306)
Q Consensus 268 ~~~~~l~~~l~ 278 (306)
+++++|+++++
T Consensus 381 ~~l~~l~~~l~ 391 (391)
T 4dq6_A 381 EALIRIKNAIN 391 (391)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 68
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=5.8e-24 Score=192.06 Aligned_cols=261 Identities=13% Similarity=0.131 Sum_probs=176.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+....+.......... |..+....+ ..|++.|++++++ .++++|+++.++|++|.+ .+.+.
T Consensus 112 d~vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~~~-~~d~~~l~~~l~~--~~~~~v~l~~p~nptG~~-~~~~~ 183 (390)
T 1d2f_A 112 EGVVIHTPAYDAFYKAIEGNQRTVMPV----ALEKQADGW-FCDMGKLEAVLAK--PECKIMLLCSPQNPTGKV-WTCDE 183 (390)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEE----ECEECSSSE-ECCHHHHHHHHTS--TTEEEEEEESSCTTTCCC-CCTTH
T ss_pred CEEEEcCCCcHHHHHHHHHCCCEEEEe----ecccCCCcc-ccCHHHHHHHhcc--CCCeEEEEeCCCCCCCcC-cCHHH
Confidence 578888888887655443322211000 110000000 1489999999974 268888887889999965 57889
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC---c-EEEeccccc-CCcccceeeEeC-HHHHhhcCCCCc
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP---D-MVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEH 156 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~---d-~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~ 156 (306)
+++|.++|++||+++|+||+|+++.+.|..+ .+...+.+ | +.|+||.++ +|+ |+||++++ +++++.+.....
T Consensus 184 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~~~d~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~ 261 (390)
T 1d2f_A 184 LEIMADLCERHGVRVISDEIHMDMVWGEQPH-IPWSNVARGDWALLTSGSKSFNIPAL-TGAYGIIENSSSRDAYLSALK 261 (390)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCSSSCC-CCGGGTCCSSEEEEECSHHHHTCGGG-CCEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCC-cCHHHcchhhHhhccCccHhhcccCh-hheEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999876665432 11111221 2 889999998 899 99999985 788777765433
Q ss_pred -cCCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHH
Q 021893 157 -GSTF-GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAY 232 (306)
Q Consensus 157 -~~~~-~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 232 (306)
..++ +.+++++.++.++++...+ ++..++++++.+.+.+.|++. +|+.....+..+.++|+.++.. +.+..
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 336 (390)
T 1d2f_A 262 GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA---FPELNWQIPQSTYLAWLDLRPL--NIDDN 336 (390)
T ss_dssp TTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCCSBCSEEEEECGGG--CCCHH
T ss_pred hhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCEEecCCccEEEEEEcccc--CCCHH
Confidence 3454 6788888888888874211 334556666666676666653 2222222223456667877641 13567
Q ss_pred HHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 233 DICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 233 ~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++++.|. ++||.+.++ .++++|++++. +++++++++++|+++++ ++
T Consensus 337 ~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~-~~ 389 (390)
T 1d2f_A 337 ALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIR-AV 389 (390)
T ss_dssp HHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHH-hh
Confidence 8999999 679999874 25799999664 68899999999999987 53
No 69
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.92 E-value=3.4e-24 Score=194.12 Aligned_cols=261 Identities=11% Similarity=0.157 Sum_probs=184.2
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCC-cEEEEEEccccC
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGD-QIAGFLFEPIQG 71 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~-~~~~v~v~~~~~ 71 (306)
+|++..|+.++...+..++..+....-...|.++. ++.+|..|+++|++.++++++ ++++|++++++|
T Consensus 105 ~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~n 184 (398)
T 3a2b_A 105 AAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFS 184 (398)
T ss_dssp EEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCT
T ss_pred cEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCC
Confidence 45666666655555544444332222112222211 355667899999999986432 689999999999
Q ss_pred CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCCCC--CcEE--EecccccCCcccceeeEeCH
Q 021893 72 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVR--PDMV--ILGKALGGGVIPVSAVLADK 145 (306)
Q Consensus 72 ~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~~~--~d~~--s~sK~~~~G~~~~g~~~~~~ 145 (306)
++|.+.+ +++|.++|++||+++|+||+|+.+ ++.+..+ .+.++.. +|++ |+||.++. . + ||+++++
T Consensus 185 ptG~~~~----~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~-~-G-G~~~~~~ 256 (398)
T 3a2b_A 185 MEGDIVN----LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLAS-L-G-GFVAGDA 256 (398)
T ss_dssp TTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCS-S-C-EEEEECH
T ss_pred CCCCccC----HHHHHHHHHHcCcEEEEECCCcccccCCCCCch-HhhcCCCcCCeEEEecccccccC-C-C-cEEEeCH
Confidence 9998887 999999999999999999999743 3333332 2333332 4665 99999982 1 2 7799999
Q ss_pred HHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 146 EVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 146 ~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
++++.+.... ...+...++...+++.++++.... ++..++++++++++.+.|++.+ +. . .+..|.++++.+
T Consensus 257 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~---~~~~g~~~~~~~ 330 (398)
T 3a2b_A 257 DVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHG--FD-L---GATESPILPIFI 330 (398)
T ss_dssp HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTT--CC-B---CSCCSSEEEEEC
T ss_pred HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhcC--CC-c---CCCCCCEEEEEc
Confidence 9888776521 233344555555566777876543 4578888899999999988862 21 1 123478888887
Q ss_pred ecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 223 DKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+. ..+..++++.|+++||.+.++. .+++|++++..++++++++++++|+++++ ++.
T Consensus 331 ~~---~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~-~~~ 393 (398)
T 3a2b_A 331 RS---NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFK-QAE 393 (398)
T ss_dssp CC---HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHH-HCC
T ss_pred CC---HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHH-HhC
Confidence 63 4567889999999999998752 47899998887899999999999999998 653
No 70
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.92 E-value=9.7e-25 Score=197.61 Aligned_cols=217 Identities=17% Similarity=0.188 Sum_probs=162.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH------cCCEEEEehhhhcccccccccc--ccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRMLA--SDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~------~gi~li~De~~~g~~~~g~~~~--~~~ 117 (306)
|+++|+++++ +++++|+++.++|++|.+ .+.+.+++|.++|++ ||+++|+||+|+++.+.|..+. ...
T Consensus 161 d~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 236 (398)
T 3ele_A 161 DFDALEERIN---AHTRGVIINSPNNPSGTV-YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKY 236 (398)
T ss_dssp CHHHHHHTCC---TTEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGT
T ss_pred CHHHHHHHhC---cCCCEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhh
Confidence 7999999887 478999998889999965 578889999999999 9999999999998866664322 233
Q ss_pred CCCCCcEEEeccccc-CCcccceeeEeCHHHHh------hcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893 118 EEVRPDMVILGKALG-GGVIPVSAVLADKEVML------CIQPGE-HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHL 189 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~ 189 (306)
++....+.|+||.++ +|+ |+||+++++++++ .+.... ...+++.+.+++.++...++ .....++++++
T Consensus 237 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~ 312 (398)
T 3ele_A 237 YDNTLVCYSYSKSLSLPGE-RIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG---ATGDINAYKEN 312 (398)
T ss_dssp CSSEEEEEESTTTSSCTTT-CCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTT---CCCCHHHHHHH
T ss_pred cCCeEEEEehhhcCCCccc-eeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 344445669999999 999 9999999887433 222111 12244556677766665543 33357788899
Q ss_pred HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHH
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNE 265 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~ 265 (306)
++++++.|+++. .....+..+.++|+.++. .+..++++.|.++||.+.++. ++++|+++. +++++
T Consensus 313 ~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~ 381 (398)
T 3ele_A 313 RDLLYEGLTRIG-----YHCFKPDGAFYMFVKALE----DDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREM 381 (398)
T ss_dssp HHHHHHHHHHHT-----CCEECCSBSSEEEEECSS----SCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHH
T ss_pred HHHHHHHHHHcC-----CeecCCCeeEEEEEEcCC----CCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHH
Confidence 999999998872 222333456668887763 357789999999999998863 689999964 79999
Q ss_pred HHHHHHHHHHHHhhhcC
Q 021893 266 LQEGSKALHDVLELDLP 282 (306)
Q Consensus 266 i~~~~~~l~~~l~~~~~ 282 (306)
+++++++|+++++ ++.
T Consensus 382 i~~~l~~l~~~l~-~~~ 397 (398)
T 3ele_A 382 IKHSMPAFEKIYK-KYN 397 (398)
T ss_dssp HHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHHH-Hhh
Confidence 9999999999998 654
No 71
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.92 E-value=2.3e-24 Score=195.19 Aligned_cols=227 Identities=14% Similarity=0.136 Sum_probs=163.3
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC-----
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE----- 118 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~----- 118 (306)
.|++.|++.+++ +++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+...+
T Consensus 151 ~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 227 (399)
T 1c7n_A 151 IDFQKLEKLSKD--KNNKALLFCSPHNPVGRV-WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLA 227 (399)
T ss_dssp CCHHHHHHHHTC--TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHH
T ss_pred EcHHHHHHHhcc--CCCcEEEEcCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCcccc
Confidence 489999999974 368888888889999965 57899999999999999999999999987665542 222211
Q ss_pred CCCCcEEEeccccc-CCcccceeeEeC-HHHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL 193 (306)
Q Consensus 119 ~~~~d~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l 193 (306)
+....+.|+||.++ +|+ |+||++++ +++++.+.......++ +.+++++.++.++++.... ++..++++++++++
T Consensus 228 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 306 (399)
T 1c7n_A 228 DKTITFTAPSKTFNIAGM-GMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIV 306 (399)
T ss_dssp TTEEEEECSHHHHTCGGG-CCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeChhhccccch-heEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 22344568999999 899 99999986 6788877654333333 5688888888888864211 23455666666666
Q ss_pred HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHH
Q 021893 194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNEL 266 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i 266 (306)
.+.|++. +|++....+..+.++|+.++.. +.+..++++.|+ ++||.+.|+ ..+++|++++. +++++
T Consensus 307 ~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l 379 (399)
T 1c7n_A 307 KDFFEVN---HPEIKAPLIEGTYLQWIDFRAL--KMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVI 379 (399)
T ss_dssp HHHHHHH---CTTSBCCCCSBSSEEEEECGGG--CCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHH
T ss_pred HHHHHhh---CCCCeEecCCceEEEEEEcccC--CCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHH
Confidence 6666652 2222222233455667777631 135678999998 689999874 35799999654 48899
Q ss_pred HHHHHHHHHHHhhhcCC
Q 021893 267 QEGSKALHDVLELDLPK 283 (306)
Q Consensus 267 ~~~~~~l~~~l~~~~~~ 283 (306)
++++++|+++++ ++.+
T Consensus 380 ~~~l~~l~~~l~-~~~~ 395 (399)
T 1c7n_A 380 QESLERLNKALK-DLKN 395 (399)
T ss_dssp HHHHHHHHHHHH-HHC-
T ss_pred HHHHHHHHHHHH-HHHh
Confidence 999999999999 7653
No 72
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.92 E-value=8.2e-25 Score=197.49 Aligned_cols=219 Identities=17% Similarity=0.191 Sum_probs=160.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC--CCCCc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE--EVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~--~~~~d 123 (306)
|+++|+++++ +++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+++...|...++..+ +....
T Consensus 153 d~~~l~~~l~---~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~ 228 (385)
T 1b5p_A 153 DPERVRRAIT---PRTKALVVNSPNNPTGAV-YPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLT 228 (385)
T ss_dssp CHHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEE
T ss_pred CHHHHHHhcC---CCCEEEEEeCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEE
Confidence 7889988886 468888888889999965 57899999999999999999999999976554421122211 22223
Q ss_pred EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH---Hhh--ccHHHHHHHHHHHHHHHH
Q 021893 124 MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV---IRD--EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 124 ~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~---~~~--~~~~~~~~~~~~~l~~~L 197 (306)
+.|+||.++ +|+ |+||+++++++++.+.......+++.+.+++.++.++++. ... ++..++++++++.+.+.|
T Consensus 229 ~~s~SK~~~~~G~-RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 307 (385)
T 1b5p_A 229 VNGAAKAFAMTGW-RIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGL 307 (385)
T ss_dssp EEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCCccc-ceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 458999998 899 9999999999888776544445566788888888877753 222 345677777888888888
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
++++ .....+..+.++|+.++.. +.+..++++.|.++||.+.|+. ++++|+++. ++++++++++++|
T Consensus 308 ~~~g-----~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l 378 (385)
T 1b5p_A 308 TALG-----LKAVRPSGAFYVLMDTSPI--APDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERF 378 (385)
T ss_dssp HHHT-----CCBCCCSBTTEEEEECTTT--CSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHG
T ss_pred HHCC-----CeecCCCeeEEEEEecCCC--CCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHH
Confidence 8762 2222344556677766421 2457789999999999998752 579999954 7899999999998
Q ss_pred HHHHh
Q 021893 274 HDVLE 278 (306)
Q Consensus 274 ~~~l~ 278 (306)
+++++
T Consensus 379 ~~~l~ 383 (385)
T 1b5p_A 379 ARVLG 383 (385)
T ss_dssp GGGC-
T ss_pred HHHHh
Confidence 77665
No 73
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.92 E-value=1.8e-24 Score=194.82 Aligned_cols=218 Identities=20% Similarity=0.184 Sum_probs=162.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccc--cCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASD--WEEVR 121 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~--~~~~~ 121 (306)
.|+++|++.++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.. |. ..... ..+..
T Consensus 140 ~d~~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~ 214 (381)
T 1v2d_A 140 LDLSALEKALT---PRTRALLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERT 214 (381)
T ss_dssp CCHHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTE
T ss_pred cCHHHHHHhcC---cCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCE
Confidence 47999998886 468999999999999976 5689999999999999999999999997644 32 11111 34556
Q ss_pred CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h--ccHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~--~~~~~~~~~~~~~l~~~ 196 (306)
+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++.+.++.++++... + ++..++++++++++.+.
T Consensus 215 ~~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (381)
T 1v2d_A 215 FTVGSAGKRLEATGY-RVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGG 293 (381)
T ss_dssp EEEEEHHHHTTCGGG-CCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeechhhcCCccc-ceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 66779999998 898 999999999988877654444567778888888888888652 2 34567777778888888
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~ 268 (306)
|++.+ .....+..|.++++.++. .+ +.+.|.++||.+.++ ..+++|++++. +++++++
T Consensus 294 L~~~g-----~~~~~~~~~~~~~~~~~~----~~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~ 359 (381)
T 1v2d_A 294 LRAMG-----LRVYVPEGTYFLMAELPG----WD---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHL 359 (381)
T ss_dssp HHHTT-----CCEECCSBSSEEEEECTT----CC---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHH
T ss_pred HHHCC-----CEecCCCcceEEEEecCh----Hh---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHH
Confidence 87741 222223346777887764 12 677778999999864 36799999764 8999999
Q ss_pred HHHHHHHHHhhhcCC
Q 021893 269 GSKALHDVLELDLPK 283 (306)
Q Consensus 269 ~~~~l~~~l~~~~~~ 283 (306)
++++|+++++ +.++
T Consensus 360 ~~~~l~~~l~-~~r~ 373 (381)
T 1v2d_A 360 ALERLGRVVN-SPRE 373 (381)
T ss_dssp HHHHHHHHC------
T ss_pred HHHHHHHHHh-hccc
Confidence 9999999988 6544
No 74
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.92 E-value=2.1e-23 Score=186.85 Aligned_cols=214 Identities=15% Similarity=0.087 Sum_probs=161.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
.|++.|+++++++ ++++|++++++|++|.+. +.+.+++|.++|++| |+++|+||+|+++...+........+..+
T Consensus 144 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i 220 (367)
T 3euc_A 144 LDRGAMLAAMAEH--QPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLL 220 (367)
T ss_dssp CCHHHHHHHHHHH--CCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEE
T ss_pred CCHHHHHHHhhcc--CCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEE
Confidence 3899999999853 578888888899999654 788899999999999 99999999999875443332334444455
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
++.|+||...+|+ |+||+++++++++.+.... .++..+++++.++.++++.... ++..++++++++++.+.|+++
T Consensus 221 ~~~s~sK~~~~G~-r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 296 (367)
T 3euc_A 221 VMRTVSKLGLAGI-RLGYVAGDPQWLEQLDKVR--PPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH- 296 (367)
T ss_dssp EEEECCCTTSCSC-CEEEEEECHHHHHHHGGGC--CSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTS-
T ss_pred EEecchhhccccc-CceeeeeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 6779999944898 9999999999998887533 3566888999988888875211 334555556666666665543
Q ss_pred hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+++. ..+..|.++++.++ +..++.+.|.++||.+.++. .+++|++++ +++++++++++|++
T Consensus 297 ---~g~~-~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~ 363 (367)
T 3euc_A 297 ---GGVT-VFPSAANFLLARVP------DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAA 363 (367)
T ss_dssp ---TTCE-ECCCSSSEEEEECS------CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred ---CCcE-ECCCCCeEEEEECC------CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence 2232 44567778887664 46688999999999998753 589999954 89999999999998
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+++
T Consensus 364 ~l~ 366 (367)
T 3euc_A 364 SLQ 366 (367)
T ss_dssp HTC
T ss_pred Hhc
Confidence 875
No 75
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=1.7e-24 Score=198.18 Aligned_cols=224 Identities=12% Similarity=0.112 Sum_probs=164.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~~~~~d~ 124 (306)
|++.|++.++ ++++++++++++|++|.. .+++.+++|.++|++||+++|+||+|+++++.|..+ .....+..+++
T Consensus 180 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~v 255 (427)
T 3dyd_A 180 DLKQLEYLID---EKTACLIVNNPSNPCGSV-FSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPI 255 (427)
T ss_dssp CHHHHHSSCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCE
T ss_pred CHHHHHHHhc---cCCCEEEEECCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcE
Confidence 7899998887 468888888889999965 589999999999999999999999999987766533 23333344444
Q ss_pred E---Eeccccc-CCcccceeeEeC-------HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q 021893 125 V---ILGKALG-GGVIPVSAVLAD-------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLG 190 (306)
Q Consensus 125 ~---s~sK~~~-~G~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~ 190 (306)
+ |+||.++ +|+ |+||++++ +++++.+..... .+++.+++++.++.++++.... ++..+++++++
T Consensus 256 i~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~i~~~l~~~~~-~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~ 333 (427)
T 3dyd_A 256 LSCGGLAKRWLVPGW-RLGWILIHDRRDIFGNEIRDGLVKLSQ-RILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNA 333 (427)
T ss_dssp EEEEESTTTSSCGGG-CCEEEEEECSTTSSHHHHHHHHHHHHH-HHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred EEEeeccccCCCcCc-ceEEEEecCcchhhHHHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4 9999986 799 99999986 466665543221 2567788999998888874222 33455666666
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCH
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISS 263 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~ 263 (306)
+.+.+.|+++ +++....+..|+++++.++... ...+..++++.|+ ++||++.|+ .++++|+++ .+++
T Consensus 334 ~~l~~~L~~~----~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~--~~~~ 407 (427)
T 3dyd_A 334 DLCYGALAAI----PGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI--TVPE 407 (427)
T ss_dssp HHHHHHHHHS----TTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES--CSCH
T ss_pred HHHHHHHhcC----CCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE--CCCH
Confidence 6666666653 3333334556778887776311 1135678888886 789999875 368999995 4799
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 021893 264 NELQEGSKALHDVLELDLP 282 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~~ 282 (306)
+++++++++|+++++ ++.
T Consensus 408 e~i~~~l~~l~~~l~-~~~ 425 (427)
T 3dyd_A 408 VMMLEACSRIQEFCE-QHY 425 (427)
T ss_dssp HHHHHHHHHHHHHHH-HHC
T ss_pred HHHHHHHHHHHHHHH-Hhh
Confidence 999999999999998 654
No 76
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=4.6e-25 Score=199.42 Aligned_cols=215 Identities=16% Similarity=0.187 Sum_probs=163.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc----CCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW----EEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~----~~~~ 121 (306)
|+++|+++++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++...|...+... .+..
T Consensus 163 d~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~ 238 (389)
T 1o4s_A 163 SLEEVEGLLV---GKTKAVLINSPNNPTGVV-YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRI 238 (389)
T ss_dssp CHHHHHHTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTE
T ss_pred CHHHHHHhcc---cCceEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcE
Confidence 7899999887 468888888889999965 5789999999999999999999999997755543222211 2333
Q ss_pred CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~ 200 (306)
..+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.. .+++.++++++++++.+.|+++
T Consensus 239 i~~~s~sK~~~~~G~-r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 239 VYINGFSKSHSMTGW-RVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp EEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeechhhcCCccc-ceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhc
Confidence 34568999998 898 99999999999888766444456677888888777776532 3456778888888888888876
Q ss_pred HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
. + ....+..|.++++.++ .+..++++.|+ ++||.+.++. ++++|++++ .+++++++++++|++
T Consensus 317 g--~---~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 317 G--V---KFVEPEGAFYLFFKVR-----GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIED 384 (389)
T ss_dssp T--C---CCCCCSBSSEEEEECS-----SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred C--C---eeecCCcceEEEEeCC-----CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHHHHHHHHHH
Confidence 2 2 1122335667777664 24678999998 8899998752 579999976 489999999999998
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+++
T Consensus 385 ~l~ 387 (389)
T 1o4s_A 385 FLN 387 (389)
T ss_dssp HHT
T ss_pred HHh
Confidence 886
No 77
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.92 E-value=1.3e-24 Score=196.14 Aligned_cols=222 Identities=15% Similarity=0.168 Sum_probs=164.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----cccc--CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDW--EE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~~--~~ 119 (306)
|++.|++.++ +++++|++++++|++|.+ .+++.+++|.++|++||+++|+||+|+++.+.|..+ .+.. .+
T Consensus 152 d~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 227 (388)
T 1j32_A 152 SPEQIRQAIT---PKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYE 227 (388)
T ss_dssp CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHH
T ss_pred CHHHHHHhcC---cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccC
Confidence 7999999987 468889988889999966 478999999999999999999999999876555321 1111 23
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
..+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++++.+.
T Consensus 228 ~~~~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 306 (388)
T 1j32_A 228 RSVVCSGFAKTYAMTGW-RVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDA 306 (388)
T ss_dssp TEEEEEESTTTTTCTTT-CCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhccCCccc-ceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4556779999998 899 9999999999988876554556677788888888877763211 23455666677777777
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccCC----CCEEEEeCCCCCCHHHHHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH----DTIVRLTPPLSISSNELQEGSK 271 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~ 271 (306)
|+++ ++.....+..+.++++.++.. +.+..++++.|++ +||.+.++. ++++|++++ +++++++++++
T Consensus 307 L~~~----~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~ 378 (388)
T 1j32_A 307 LNAM----PGLECPKPDGAFYMFPSIAKT--GRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGME 378 (388)
T ss_dssp HHTC----TTCBCCCCCBTTEECCBCGGG--TCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHH
T ss_pred HhhC----CCCcccCCCeeEEEEEecCCC--CCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHH
Confidence 6653 222222233456666655421 1356789999986 699998752 689999964 78999999999
Q ss_pred HHHHHHhhhc
Q 021893 272 ALHDVLELDL 281 (306)
Q Consensus 272 ~l~~~l~~~~ 281 (306)
+|+++++ ++
T Consensus 379 ~l~~~l~-~~ 387 (388)
T 1j32_A 379 RLEKFLH-GI 387 (388)
T ss_dssp HHHHHHH-HH
T ss_pred HHHHHHH-Hh
Confidence 9999987 53
No 78
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=7.1e-25 Score=199.53 Aligned_cols=221 Identities=16% Similarity=0.186 Sum_probs=164.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc----CC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW----EE 119 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~----~~ 119 (306)
.|++.|+++++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .++.. .+
T Consensus 148 ~d~~~l~~~l~---~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 223 (411)
T 2o0r_A 148 LDADALRRAVT---PRTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAE 223 (411)
T ss_dssp CCHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred CCHHHHHHhhc---cCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCC
Confidence 48999999987 478899988899999965 57899999999999999999999999987665532 12211 23
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
..+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++++.+.
T Consensus 224 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 302 (411)
T 2o0r_A 224 RTITISSAAKMFNCTGW-KIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAG 302 (411)
T ss_dssp GEEEEEEHHHHTTCTTT-CEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhcCCccc-eEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 3445669999998 898 9999999999988776544444566677777887788765321 34567777788888888
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-----------------CCCEEEEeCC
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-----------------HDTIVRLTPP 258 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----------------~~~~lRi~~~ 258 (306)
|++.. +....+..|.++++.++... ..+..++++.|+ ++||.+.++ +.+++|+++.
T Consensus 303 L~~~g-----~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~ 376 (411)
T 2o0r_A 303 LTEIG-----FAVHDSYGTYFLCADPRPLG-YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC 376 (411)
T ss_dssp HHHHT-----CEECCCCBSSEEEEECGGGT-CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC
T ss_pred HHHcC-----CEecCCCeeEEEEEecCCCC-CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec
Confidence 87762 22223445778888876410 124678888887 579998763 2468999964
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 021893 259 LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 259 ~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+++++++++++|+++++
T Consensus 377 --~~~e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 377 --KRDDTLDEAIRRLSVLAE 394 (411)
T ss_dssp --SCHHHHHHHHHHHGGGGC
T ss_pred --CCHHHHHHHHHHHHHHHh
Confidence 589999999999988777
No 79
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.92 E-value=1.7e-24 Score=195.77 Aligned_cols=251 Identities=13% Similarity=0.034 Sum_probs=172.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+....+.......... |.... . + ..|++.|++++++ +++++++++++|++|.+ .+.+.
T Consensus 121 d~vl~~~p~~~~~~~~~~~~g~~~~~v----~~~~~-g-~-~~d~~~l~~~~~~---~~~~v~l~~p~nptG~~-~~~~~ 189 (396)
T 3jtx_A 121 PAIVSPNPFYQIYEGATLLGGGEIHFA----NCPAP-S-F-NPDWRSISEEVWK---RTKLVFVCSPNNPSGSV-LDLDG 189 (396)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEE----ECCTT-T-C-CCCGGGSCHHHHH---TEEEEEEESSCTTTCCC-CCHHH
T ss_pred CEEEEcCCCcHhHHHHHHHcCCEEEEe----ecCCC-C-C-ccCHHHHHHhhcc---CcEEEEEECCCCCCCCc-CCHHH
Confidence 467777777776554433332211110 11000 0 0 1278899999984 68888888889999965 46888
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccc-cccccc--------cCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSG-RMLASD--------WEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQ 152 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g-~~~~~~--------~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~ 152 (306)
+++|.++|++||+++|+||+|+++.+.+ ..+... ..+..+++.|+||.++ +|+ |+||+++++++++.+.
T Consensus 190 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~ 268 (396)
T 3jtx_A 190 WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGL-RSGFVAGDAELLKNFL 268 (396)
T ss_dssp HHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGG-CCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCccc-ceEEEEeCHHHHHHHH
Confidence 9999999999999999999999876666 332211 1344556779999987 899 9999999999998887
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893 153 PGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231 (306)
Q Consensus 153 ~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 231 (306)
......+++.+++++.++.++++.... ++..++++++.+.+.+.|++. . ....+..|.++|+.++. .+.
T Consensus 269 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---~---~~~~~~~~~~~~~~~~~----~~~ 338 (396)
T 3jtx_A 269 LYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV---F---DVKLPDASFYIWLKVPD----GDD 338 (396)
T ss_dssp HHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT---S---CCCCCSSSSEEEEECTT----SCH
T ss_pred HHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc---C---CccCCCeeEEEEEECCC----CCH
Confidence 655556677889999988888763110 223344444444444444432 1 11234457788888763 356
Q ss_pred HHHHHHHHH-CCceeccC------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 232 YDICLKMKE-RGILAKPT------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 232 ~~~~~~l~~-~Gi~~~~~------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++++.|++ +||.+.|+ +.+++|++++ .+++++++++++|++++
T Consensus 339 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 339 LAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 788888864 59999763 3589999965 49999999999998875
No 80
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=5.5e-25 Score=197.65 Aligned_cols=208 Identities=13% Similarity=0.047 Sum_probs=155.6
Q ss_pred HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc---------cCC
Q 021893 49 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD---------WEE 119 (306)
Q Consensus 49 ~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~---------~~~ 119 (306)
++++.+.. ++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.+...+.. ..+
T Consensus 146 ~l~~~~~~---~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (376)
T 3ezs_A 146 SLNEKELQ---EVDLVILNSPNNPTGRT-LSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFK 221 (376)
T ss_dssp CCCHHHHH---HCSEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCT
T ss_pred hHHhhhcc---CCCEEEEcCCCCCcCCC-CCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccC
Confidence 56666763 57788888889999965 578889999999999999999999999876665433221 234
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L 197 (306)
..+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++.+.+.+.|
T Consensus 222 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 300 (376)
T 3ezs_A 222 NVLVIHSLSKRSSAPGL-RSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIF 300 (376)
T ss_dssp TEEEEEESTTTTTCGGG-CCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHS
T ss_pred cEEEEecchhccCCccc-eeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHh
Confidence 4556779999997 899 9999999999998887655566778889999888888864111 223344444444444444
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC--------CCCEEEEeCCCCCCHHHHHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT--------HDTIVRLTPPLSISSNELQE 268 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~ 268 (306)
+ . +. .+..|.++++.++ +..++++.|++ +||.+.|+ ..+++|++++ .+++++++
T Consensus 301 ~----~---~~--~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i~~ 363 (376)
T 3ezs_A 301 K----N---TL--IYPYSFYVYLPVQ------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLLEK 363 (376)
T ss_dssp T----T---CC--CCSBSSEEEEECS------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHHHH
T ss_pred c----C---CC--CCCcceEEEEECC------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHHHH
Confidence 3 1 22 4567888888765 35688999988 89999863 4689999965 49999999
Q ss_pred HHHHHHHHHh
Q 021893 269 GSKALHDVLE 278 (306)
Q Consensus 269 ~~~~l~~~l~ 278 (306)
++++|+++++
T Consensus 364 ~l~~l~~~l~ 373 (376)
T 3ezs_A 364 PLEIIETYRE 373 (376)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999999987
No 81
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=5.3e-24 Score=190.44 Aligned_cols=210 Identities=15% Similarity=0.134 Sum_probs=153.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCC---
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVR--- 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~--- 121 (306)
|+++|++.++ +++++|++++++|++|.+.+ .+.+.+|++.|++ |+++|+||+|+++.+ +..... ......
T Consensus 144 d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~-~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~ 217 (363)
T 3ffh_A 144 DLEGMLNAID---EKTTIVWICNPNNPTGNYIE-LADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNL 217 (363)
T ss_dssp CHHHHHHHCC---TTEEEEEEESSCTTTCCCCC-HHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTE
T ss_pred CHHHHHHhcc---cCCCEEEEeCCCCCcCCCcC-HHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCE
Confidence 8999999987 57999999999999997764 5555555555555 999999999998765 433222 111111
Q ss_pred CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~ 199 (306)
..+.|+||.++ +|+ |+||+++++++++.+..... +++.+.+++.++.++++.... ++..++++++.+++.+.|++
T Consensus 218 i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (363)
T 3ffh_A 218 IITRTFSKIYGLASA-RVGYGIADKEIIRQLNIVRP--PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR 294 (363)
T ss_dssp EEEEESSSTTCCSSC-CCEEEEECHHHHHHHHHTCC--SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeechhhhcCchh-ceeeeecCHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 12568999998 899 99999999999888775433 677889999999888863311 33455666666666666665
Q ss_pred HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
. ++. ...+..|.++++.++. +..++.+.|.++||.+.++. ++++|++++ +++++++++++|++
T Consensus 295 ~----~g~-~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 295 F----EKV-KLYPANGNFVLIDLGI-----EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEK 361 (363)
T ss_dssp C----TTC-EECCCCSSEEEEECSS-----CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred C----CCc-eECCCCCeEEEEECCC-----CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHH
Confidence 2 122 2335567788887752 56789999999999999853 689999954 89999999999987
Q ss_pred HH
Q 021893 276 VL 277 (306)
Q Consensus 276 ~l 277 (306)
++
T Consensus 362 ~l 363 (363)
T 3ffh_A 362 LL 363 (363)
T ss_dssp HC
T ss_pred hC
Confidence 63
No 82
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=2.2e-24 Score=194.04 Aligned_cols=221 Identities=14% Similarity=0.156 Sum_probs=162.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc-----CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW-----EE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~-----~~ 119 (306)
|+++|+++++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|... +... .+
T Consensus 145 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 220 (383)
T 3kax_A 145 DFEHLEKQFQ---QGVKLMLLCSPHNPIGRV-WKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAA 220 (383)
T ss_dssp CHHHHHHHHT---TTCCEEEEESSBTTTTBC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHT
T ss_pred cHHHHHHHhC---cCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccC
Confidence 8999999994 578888888899999965 578899999999999999999999999877666422 1111 13
Q ss_pred CCCcEEEeccccc-CCcccceeeEe-CHHHHhhcCCCCcc-CCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHG-STFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELR 194 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~ 194 (306)
..+.+.|+||.++ +|+ |+||+++ ++++++.+...... ..++.+++++.++.++++... .++..++++++.+++.
T Consensus 221 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 299 (383)
T 3kax_A 221 RTITCMAPSKTFNIAGL-QASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFAC 299 (383)
T ss_dssp TEEEEECSHHHHTCGGG-CCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEChhhccCcch-hheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 3345668999999 899 9999988 68888777654332 334678888888888876522 1334566666777777
Q ss_pred HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893 195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~ 267 (306)
+.|++. +++.....+..+.+.|+.++.. +.+..++++.|+ ++||.+.++ +.+++|++++ .++++++
T Consensus 300 ~~l~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~ 372 (383)
T 3kax_A 300 EYIKDH---IPTLSVMKPEGSFLLWIDCSAL--NLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLE 372 (383)
T ss_dssp HHHHHH---CTTCEECCCSBSSEEEEECGGG--CCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHH
T ss_pred HHHHhh---CCCceEecCCceEEEEEEcccc--CCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHH
Confidence 777664 2223223334556666777641 236788999998 679999874 3589999965 6899999
Q ss_pred HHHHHHHHHHh
Q 021893 268 EGSKALHDVLE 278 (306)
Q Consensus 268 ~~~~~l~~~l~ 278 (306)
+++++|+++++
T Consensus 373 ~~l~~l~~~l~ 383 (383)
T 3kax_A 373 EILNRLRHTFS 383 (383)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 83
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.91 E-value=1.4e-24 Score=195.90 Aligned_cols=218 Identities=16% Similarity=0.153 Sum_probs=160.8
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----ccc-cCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASD-WEE 119 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~-~~~ 119 (306)
.|+++|++.++ +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|... ..+ ..+
T Consensus 151 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 226 (386)
T 1u08_A 151 VDWQEFAALLS---ERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE 226 (386)
T ss_dssp CCHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHT
T ss_pred CCHHHHHHhhc---ccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccC
Confidence 47999999886 578999998889999965 578899999999999999999999999876555321 111 234
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
..+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++++++.+.
T Consensus 227 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 305 (386)
T 1u08_A 227 RAVAVSSFGKTYHMTGW-KVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNA 305 (386)
T ss_dssp TEEEEEEHHHHTTCGGG-CCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHH
T ss_pred cEEEEecchhhcCCccc-ceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4555679999999 899 9999999999988877544445677788888888888875311 33556666666666666
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC--------CCCEEEEeCCCCCCHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT--------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~ 267 (306)
|++. ++....+..|.++++.++... ..+..++++.|+ ++||.+.|+ ..+++|++++ .++++|+
T Consensus 306 L~~~-----g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~ 377 (386)
T 1u08_A 306 LNES-----RLEILPCEGTYFLLVDYSAVS-TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--KKESTLL 377 (386)
T ss_dssp TTSS-----SCEECCCCBSSEEEEECTTTC-CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--SCHHHHH
T ss_pred HHHC-----CCeecCCCceEEEEEecCCCC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--CCHHHHH
Confidence 6553 122223345778888876410 035678888887 679999864 3579999965 5899999
Q ss_pred HHHHHHHH
Q 021893 268 EGSKALHD 275 (306)
Q Consensus 268 ~~~~~l~~ 275 (306)
+++++|++
T Consensus 378 ~~~~~l~~ 385 (386)
T 1u08_A 378 AAAERLRQ 385 (386)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 99998864
No 84
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=8.5e-24 Score=188.35 Aligned_cols=213 Identities=16% Similarity=0.125 Sum_probs=161.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccC-CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWE-EV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~-~~ 120 (306)
|++.|++.++++ +++++|++++++|++|.+. +.+.+++|+++| +||+++|+||+|+++...+.... .+.. +.
T Consensus 128 d~~~l~~~l~~~-~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 204 (354)
T 3ly1_A 128 DIEGLKAAVAAY-SGPSIVYLVNPNNPTGTIT-PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAEN 204 (354)
T ss_dssp CHHHHHHHHHTC-SSCEEEEEESSCTTTCCCC-CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSS
T ss_pred CHHHHHHHhccC-CCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCC
Confidence 899999999853 4688888888899999765 566677777777 79999999999998765553211 1222 33
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLF 198 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~ 198 (306)
...+.|+||.++ +|+ |+||+++++++++.+...... ++.+++++.++.++++.... ++..++++++.+++++.|+
T Consensus 205 ~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 281 (354)
T 3ly1_A 205 IILLKTFSKIHAMAGM-RVGYAVAHPTVIALMGRYVAG--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALE 281 (354)
T ss_dssp EEEEEESSSTTCCGGG-CCEEEECCHHHHHHHGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeChhhccChhh-hheeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345669999998 899 999999999999888764333 67888988888888764421 3456777778888888887
Q ss_pred HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec---cCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK---PTHDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~---~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+.. + . ..+..|.++++.++. +..++.+.|.++||.+. ....+++|++++ +++++++++++|++
T Consensus 282 ~~~--~---~-~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~ 347 (354)
T 3ly1_A 282 DLK--L---P-YLPSEGNFVFHQLVV-----PLKDYQTHMADAGVLIGRAFPPADNWCRISLG---TPQEMQWVADTMRE 347 (354)
T ss_dssp HHT--C---C-BCCCCSSEEEEECSS-----CHHHHHHHHHHTTEECCCCCTTCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred HCC--C---e-ECCCCceEEEEECCC-----CHHHHHHHHHHCCEEEeecCCCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence 762 2 1 224567788887763 56789999999999987 124689999943 79999999999999
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+++
T Consensus 348 ~l~ 350 (354)
T 3ly1_A 348 FRK 350 (354)
T ss_dssp HHH
T ss_pred HHH
Confidence 987
No 85
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=7.7e-23 Score=183.44 Aligned_cols=246 Identities=13% Similarity=0.053 Sum_probs=177.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+|++...+||+....+.......... |...+ . ..|++.|++.++++ ++++|++++++|++|.+.+
T Consensus 116 gd~Vl~~~~~y~~~~~~~~~~g~~~~~v----~~~~~---~-~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~--- 182 (369)
T 3cq5_A 116 GRTALGFQPSYSMHPILAKGTHTEFIAV----SRGAD---F-RIDMDVALEEIRAK--QPDIVFVTTPNNPTGDVTS--- 182 (369)
T ss_dssp TCEEEEEESSCTHHHHHHHHTTCEEEEE----ECCTT---S-SCCHHHHHHHHHHH--CCSEEEEESSCTTTCCCCC---
T ss_pred CCEEEEcCCChHHHHHHHHHcCCEEEEe----cCCcC---C-CCCHHHHHHHhhcc--CCCEEEEeCCCCCCCCCCC---
Confidence 3578888888887655443332211110 11100 0 23799999999852 5778888999999998887
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC-CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE-VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGS 158 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~-~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~ 158 (306)
++++.++|+.+++++|+||+|+++......+.. +.++ ..+++.|+||.++ +|+ |+||+++++++++.+.... .
T Consensus 183 -~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~--~ 258 (369)
T 3cq5_A 183 -LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGG-RLGYFVANPAFIDAVMLVR--L 258 (369)
T ss_dssp -HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGG-CCEEEEECTHHHHHHHTTS--C
T ss_pred -HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCccc-ceEEEEeCHHHHHHHHHcC--C
Confidence 788888888888999999999977543222221 2233 3456779999998 898 9999999999988887533 3
Q ss_pred CCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHH
Q 021893 159 TFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK 237 (306)
Q Consensus 159 ~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 237 (306)
+++.+++++.++.++++... -++..++++++++++.+.|++.+ .. ..+..|.++++.++ .+..++.+.
T Consensus 259 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~-~~~~~~~~~~~~~~-----~~~~~l~~~ 327 (369)
T 3cq5_A 259 PYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELG-----YA-VVPSESNFVFFGDF-----SDQHAAWQA 327 (369)
T ss_dssp TTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHT-----CE-EECCSSSEEEEECC-----SSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CE-ECCCCCeEEEEECC-----CCHHHHHHH
Confidence 45678888888888887532 14467778888888888887742 22 23556778888664 246789999
Q ss_pred HHHCCceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 238 MKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 238 l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
|.++||.+.+++ ++++|++++ ++++++.++++|+++++
T Consensus 328 l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 328 FLDRGVLIRDVGIAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp HHHTTEECBCCSCTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred HHHCCEEEEECCCCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 999999999863 679999965 78999999999998876
No 86
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.91 E-value=3.9e-24 Score=194.29 Aligned_cols=218 Identities=16% Similarity=0.205 Sum_probs=160.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC----CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE----EV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~----~~ 120 (306)
|+++|++.++ +++++|++++++|++|.+. +++.+++|.++|++||+++|+||+|+++.+.|..+ ++... +.
T Consensus 156 d~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 231 (410)
T 3e2y_A 156 DPRELESKFS---SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231 (410)
T ss_dssp CHHHHHTTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred CHHHHHhhcC---CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence 7899998886 5799999999999999654 78889999999999999999999999887666422 22222 22
Q ss_pred CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-----hh----ccHHHHHHHHH
Q 021893 121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-----RD----EKLAERSAHLG 190 (306)
Q Consensus 121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-----~~----~~~~~~~~~~~ 190 (306)
..++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.. .. ++..+++++++
T Consensus 232 ~i~~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T 3e2y_A 232 TITIGSAGKTFSVTGW-KLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR 310 (410)
T ss_dssp EEEEEEHHHHSSCGGG-CCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred EEEEecchhhcCCCCc-eEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 244568999999 899 99999999999988876556667888999999988888741 11 22445555566
Q ss_pred HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh--------hhHHHHHHHHH-HCCceeccC-----------CC
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP--------VSAYDICLKMK-ERGILAKPT-----------HD 250 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~--------~~~~~~~~~l~-~~Gi~~~~~-----------~~ 250 (306)
+.+.+.|++. +.....+..|.++++.+...... ....++++.++ ++||.+.|+ +.
T Consensus 311 ~~l~~~L~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~ 385 (410)
T 3e2y_A 311 DRMVRLLNSV-----GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFE 385 (410)
T ss_dssp HHHHHHHHTT-----TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHT
T ss_pred HHHHHHHHHC-----CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCC
Confidence 6666666554 24444566788888887642211 12347777665 669998864 14
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+++|++ +..+++++++++++|++
T Consensus 386 ~~iRis--~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 386 KLVRFC--FIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp TEEEEE--CCCCHHHHHHHHHHHHT
T ss_pred CEEEEE--EcCCHHHHHHHHHHHHh
Confidence 799999 45699999999999875
No 87
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=1.4e-23 Score=189.09 Aligned_cols=244 Identities=19% Similarity=0.229 Sum_probs=178.2
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHH
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL 83 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l 83 (306)
++|++...+|+.+..+....+- .++.+|+.|+++|++.+++++++++++++++++|++|.+.+ +
T Consensus 124 d~v~~~~~~~~~~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~----l 187 (384)
T 1bs0_A 124 DRIAADRLSHASLLEAASLSPS------------QLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP----L 187 (384)
T ss_dssp CEEEEETTCCHHHHHHHHTSSS------------EEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC----H
T ss_pred cEEEEcccccHHHHHHHHHcCC------------CEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC----H
Confidence 3455556666655444333321 13456678999999999875445899999999999999887 9
Q ss_pred HHHHHHHHHcCCEEEEehhhh-cc-cccccccccccCCCCCcEE--EecccccCCcccceeeEeCHHHHhhcCCCC--cc
Q 021893 84 KAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--HG 157 (306)
Q Consensus 84 ~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~ 157 (306)
++|.++|++||+++|+||+|+ ++ ++.|..+ .+.++..+|++ |+||.++ . +.||+++++++++.+.... ..
T Consensus 188 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~--~-~GG~~~~~~~~~~~l~~~~~~~~ 263 (384)
T 1bs0_A 188 AEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS-CWLQKVKPELLVVTFGKGFG--V-SGAAVLCSSTVADYLLQFARHLI 263 (384)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH-HHHTTCCCSEEEEESSSTTS--S-CCEEEEECHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHcCcEEEEECCcccceecCCCCch-HHhcCCCCcEEEeeccchhh--c-cCcEEEeCHHHHHHHHHhchhhh
Confidence 999999999999999999997 43 3344433 23444567776 9999998 2 3388999999888776421 22
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHH
Q 021893 158 STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI 234 (306)
Q Consensus 158 ~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~ 234 (306)
.+...+++.++++.++++.+.+ ++..++++++++++.+.|++.. ... .+..+.++++.++. ..+..++
T Consensus 264 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~-~~~~~~~~~~~~~~---~~~~~~l 334 (384)
T 1bs0_A 264 YSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-----FTL-ADSCSAIQPLIVGD---NSRALQL 334 (384)
T ss_dssp SSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-----CEE-CSCCSSBCCEEEES---HHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-----Ccc-cCCCCCEEEEEeCC---HHHHHHH
Confidence 2335788888888888888763 3567777888888888777652 211 12567777887763 4567789
Q ss_pred HHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 235 CLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 235 ~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.+.|.++||.+.++. .+++|++++..++++++++++++|+++
T Consensus 335 ~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 335 AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 999999999998742 378999998888999999999999864
No 88
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.91 E-value=5.4e-23 Score=185.02 Aligned_cols=220 Identities=14% Similarity=0.119 Sum_probs=167.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++++++. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+.+.. .+....+ ..|+
T Consensus 132 ~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~~~---~~~~~~~--~~di 201 (386)
T 2dr1_A 132 VKPEDLDDALRKN-PDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSAMGGA---DIKFDKW--GLDV 201 (386)
T ss_dssp CCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTBTTB---CCCTTTT--TCSE
T ss_pred CCHHHHHHHHhcC-CCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEccccccCc---ccccccc--CCcE
Confidence 5899999999753 46889999999999999887 99999999999999999999984311 1222223 3565
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhcCCC------------------CccCCCCCCHHHHHHHHHHHHHHhhc----
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPG------------------EHGSTFGGNPLASAVAIASLDVIRDE---- 180 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~aa~~al~~~~~~---- 180 (306)
+ |+||.++++. ++|++++++++++.+.+. ....+++.+.+.+.++.++++.+.+.
T Consensus 202 ~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~ 280 (386)
T 2dr1_A 202 VFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKE 280 (386)
T ss_dssp EEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHH
T ss_pred EEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHH
Confidence 5 5669999776 789999999988877431 12334567888888888899887543
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEE
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRL 255 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi 255 (306)
+..++++++.+++.+.|++.+ +. .... ....+.++++.++. +.+..++++.|.++||.+.++ ..+++|+
T Consensus 281 ~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 354 (386)
T 2dr1_A 281 KWLEMYEKRAKMVREGVREIG--LD-ILAEPGHESPTITAVLTPP---GIKGDEVYEAMRKRGFELAKGYGSVKEKTFRI 354 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--CC-BSSCTTCBCSSEEEEECCT---TCCHHHHHHHHHHTTEECEECCGGGTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcC--Ce-eCcCccccCCceEEEEcCC---CCCHHHHHHHHHHCCeEEecCccccCCCEEEE
Confidence 567788888888888888762 21 1111 01146777887763 345778999999999999885 3579999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 256 TPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 256 ~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++..++++++++++++|+++++ ++.
T Consensus 355 ~~~~~~~~~~i~~~~~~l~~~~~-~~~ 380 (386)
T 2dr1_A 355 GHMGYMKFEDIQEMLDNLREVIN-ELK 380 (386)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHHH-HHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence 98888899999999999999988 653
No 89
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.91 E-value=1.7e-23 Score=186.91 Aligned_cols=243 Identities=14% Similarity=0.135 Sum_probs=168.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+....+........ .-|...+ + ..|++++++.++ ++++|++++++|++|.+ .+.+.
T Consensus 101 d~Vl~~~p~~~~~~~~~~~~g~~~~----~v~~~~~---~-~~d~~~l~~~i~----~~~~v~l~~p~nptG~~-~~~~~ 167 (356)
T 1fg7_A 101 DAILYCPPTYGMYSVSAETIGVECR----TVPTLDN---W-QLDLQGISDKLD----GVKVVYVCSPNNPTGQL-INPQD 167 (356)
T ss_dssp CEEEECSSSCTHHHHHHHHHTCEEE----ECCCCTT---S-CCCHHHHHTSCT----TEEEEEEESSCTTTCCC-CCHHH
T ss_pred CEEEEeCCChHHHHHHHHHcCCEEE----EeeCCCC---C-CCCHHHHHHHhc----CCCEEEEeCCCCCCCCC-CCHHH
Confidence 5677777888775544433222110 0111111 0 137888887775 57888888889999966 57899
Q ss_pred HHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTF 160 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (306)
+++|.++|+ +|+++|+||+|++++........ +.++....+.|+||.++ +|+ |+||+++++++++.+... ..++
T Consensus 168 l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~--~~~~ 243 (356)
T 1fg7_A 168 FRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGL-RCGFTLANEEVINLLMKV--IAPY 243 (356)
T ss_dssp HHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGG-CCEEEEECHHHHHHHHHH--SCSS
T ss_pred HHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchh-hhEEEEeCHHHHHHHHHh--cCCC
Confidence 999999999 99999999999987532222222 22333344669999998 899 999999999998877642 2345
Q ss_pred CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHH
Q 021893 161 GGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK 237 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 237 (306)
+.+++++.++.++++... -++..++++++++++.+.|+++ +......+..|.++++.++ +..++++.
T Consensus 244 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~------~~~~l~~~ 313 (356)
T 1fg7_A 244 PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI----PCVEQVFDSETNYILARFK------ASSAVFKS 313 (356)
T ss_dssp CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHS----TTEEEECCCSSSEEEEEET------THHHHHHH
T ss_pred CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhC----CCceEECCCCCeEEEEECC------CHHHHHHH
Confidence 678888888888876532 2334556666667777666654 2222233556788888764 35689999
Q ss_pred HHHCCceecc-CC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 238 MKERGILAKP-TH----DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 238 l~~~Gi~~~~-~~----~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
|.++||.+.+ +. ++++|++++ +++++++++++|++
T Consensus 314 L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 314 LWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRA 353 (356)
T ss_dssp HHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHT
T ss_pred HHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 9999999998 42 469999964 68999999998865
No 90
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.91 E-value=3.3e-24 Score=197.32 Aligned_cols=260 Identities=12% Similarity=0.086 Sum_probs=178.4
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+|++.+.+|++....+........... ..+..+..+++++-+.+...+.+. +++++|++++++|++|.+ ++.+
T Consensus 155 gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~p~NPtG~~-~~~~ 229 (449)
T 3qgu_A 155 KPTVAVQDPSYPVYVDTSVMMGMTGDHNG---TGFDGIEYMVCNPDNHFFPDLSKA-KRTDIIFFCSPNNPTGAA-ATRA 229 (449)
T ss_dssp SSCEEEEESCCTHHHHHHHHHTCSCCBCS---SSBTTEEEEECCGGGTTCCCGGGC-CCCSEEEEESSCTTTCCC-CCHH
T ss_pred CCEEEEcCCCChhHHHHHHHcCCcccccc---cccceeEEEecccccCCcCChhHc-CCCCEEEEeCCCCCCCCc-CCHH
Confidence 46788999999887665554443211110 111223444444322222122222 467788888889999965 5789
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC----CCCCcEEEeccccc-CCcccceeeEeCHHHHhh-----
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE----EVRPDMVILGKALG-GGVIPVSAVLADKEVMLC----- 150 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~----- 150 (306)
.+++|+++|++||+++|+||+|+++.+.|.. ..+..+ +..+.+.|+||.++ +|+ |+||+++++++++.
T Consensus 230 ~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~ 308 (449)
T 3qgu_A 230 QLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGV-RLGWTVVPKALKYANGEPV 308 (449)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTC-CCEEEECCTTCBCTTSCBH
T ss_pred HHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccc-eeEEEecCHHHHhhhhhhH
Confidence 9999999999999999999999987666532 122222 23345679999999 999 99999999887652
Q ss_pred ---cCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893 151 ---IQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 224 (306)
Q Consensus 151 ---~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~ 224 (306)
+.........+.+++++.++.++++... .++..++++++++++++.|++.+ +....+..|.++|+.++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~- 382 (449)
T 3qgu_A 309 HADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMG-----FSVYGGDDAPYIWVGFP- 382 (449)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEESSSSSEEEEECT-
T ss_pred HHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CeeeCCCCeeEEEEECC-
Confidence 2221223344678888888888876522 24466777888888888887752 22233445788888776
Q ss_pred CCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 225 TALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 225 ~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.+..++++.|+++ ||.+.|+ +++++|++ +..+++++++++++|+++++
T Consensus 383 ---~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 383 ---GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--AFGSRENILEAVRRFKEAYG 438 (449)
T ss_dssp ---TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHC
T ss_pred ---CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH
Confidence 24567899888876 9998874 36899999 55699999999999999988
No 91
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.91 E-value=2.6e-23 Score=187.39 Aligned_cols=222 Identities=16% Similarity=0.196 Sum_probs=164.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++ +..+..+.++.+..+
T Consensus 135 ~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~~~~~~~~~~d~~~ 205 (393)
T 3kgw_A 135 YTLQEVEEGLAQH--KPVLLFLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GVPIYMDQQGIDIMY 205 (393)
T ss_dssp CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TSCCCTTTTTCCEEE
T ss_pred CCHHHHHHHHhhC--CCcEEEEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--CcccchhhcCCCEEE
Confidence 4899999999853 6889999999999998887 9999999999999999999997 11 122222333333333
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCCc-----------------------cCCCCCCHHHHHHHHHHHHHHhh--
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------------GSTFGGNPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa~~al~~~~~-- 179 (306)
.+++|+++|+. ++|++++++++++.+..... ...++.+..+++++.++++.+.+
T Consensus 206 ~s~sK~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 284 (393)
T 3kgw_A 206 SSSQKVLNAPP-GISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQG 284 (393)
T ss_dssp EESSSTTCCCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_pred ecCcccccCCC-ceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 45569998887 89999999998887754211 11234577788888888887655
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCcee--eEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCC
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVK--EVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDT 251 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~ 251 (306)
+++.++++++++++.+.|+++... ... .....+.++++.++. ..+..++.+.|+++ ||.+.++ .++
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 358 (393)
T 3kgw_A 285 LENCWRRHREATAHLHKHLQEMGLK---FFVKDPEIRLPTITTVTVPA---GYNWRDIVSYVLDHFSIEISGGLGPTEER 358 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC---BSSSSGGGBCSSEEEEECCT---TBCHHHHHHHHHHHHCEECBCCCGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCe---eccCChhhcCCeEEEEeCCC---CCCHHHHHHHHHHhCCEEEeCCcccCCCC
Confidence 456788888888888888886211 110 112235666676653 35678899999998 9999975 467
Q ss_pred EEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 252 IVRLTP-PLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 252 ~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
++|+++ +...+++++++++++|+++++ ++.+
T Consensus 359 ~iRi~~~~~~~~~~~i~~~~~~l~~~l~-~~~~ 390 (393)
T 3kgw_A 359 VLRIGLLGYNATTENVDRVAEALREALQ-HCPK 390 (393)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHHHHH-HSCB
T ss_pred EEEEEecccCCCHHHHHHHHHHHHHHHH-hhhh
Confidence 999997 555699999999999999999 8764
No 92
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.91 E-value=1.3e-23 Score=191.90 Aligned_cols=227 Identities=16% Similarity=0.110 Sum_probs=165.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHH-HcCCEEEEehhhhc--cccccccc-cc----
Q 021893 45 GDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCS-KYNILMIADEIQSG--LARSGRML-AS---- 115 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~-v~~~~~~~G~~~~~~~~l~~i~~l~~-~~gi~li~De~~~g--~~~~g~~~-~~---- 115 (306)
.|++.|++.+++ .++++|+ ++.++|++|. +.+.+.+++|.++|+ +||+++|+||+|.. |...+..+ +.
T Consensus 165 ~d~~~l~~~l~~--~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 241 (422)
T 3d6k_A 165 PDMGVVRELVKD--PQVKGMWTVPVFGNPTGV-TFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFA 241 (422)
T ss_dssp ECHHHHHHHHTS--TTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHH
T ss_pred CCHHHHHHHHhc--CCCeEEEEcCCCCCCCCC-CCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHh
Confidence 479999999974 2688888 4567888886 468999999999999 99999999999974 64443211 11
Q ss_pred ---ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h--ccHHHHHH
Q 021893 116 ---DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D--EKLAERSA 187 (306)
Q Consensus 116 ---~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~--~~~~~~~~ 187 (306)
+..+..+++.||||..++|+ |+||+++++++++.+.......+++.+.+++.++.++++... . ++..++++
T Consensus 242 ~~~~~~~~~i~~~S~SK~~~~Gl-riG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 320 (422)
T 3d6k_A 242 QAAGNPNRFWFMSSTSKITHAGS-GVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLA 320 (422)
T ss_dssp HHTTCTTCEEEEEESTTTSCTTS-SCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHH
T ss_pred hccCCCCcEEEEcChhhhcCccc-ceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 12344556779999966899 999999999998888765455566778898888887775411 1 22344555
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeC
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTP 257 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~ 257 (306)
++.+.+++.|++.....+......+..|+++|+.++. .+...+.+.|.++||.+.|+ ..+++|+++
T Consensus 321 ~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~ 396 (422)
T 3d6k_A 321 PKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVP----GTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAP 396 (422)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEEST----TCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCC----CCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEec
Confidence 5666666677665433211222334578888998874 14567888999999999883 147999997
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 258 PLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 258 ~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+. .+++++++++++|+++++ ++
T Consensus 397 ~~-~~~e~i~~~~~~l~~~l~-~~ 418 (422)
T 3d6k_A 397 SL-PPVAELEVAMDGFATCVL-MA 418 (422)
T ss_dssp SS-SCHHHHHHHHHHHHHHHH-HH
T ss_pred CC-CCHHHHHHHHHHHHHHHH-HH
Confidence 65 799999999999999988 65
No 93
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=1.8e-24 Score=196.79 Aligned_cols=217 Identities=13% Similarity=0.156 Sum_probs=161.2
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCcE-
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPDM- 124 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d~- 124 (306)
+++|+++++ +++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+++.+.+...+. ..+. ..|+
T Consensus 164 ~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~ 238 (409)
T 2gb3_A 164 PQNLESFIN---ERTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVV 238 (409)
T ss_dssp CTTGGGGCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEE
T ss_pred HHHHHHhhC---cCCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEE
Confidence 567777776 468888988899999965 57899999999999999999999999987655533322 1122 2354
Q ss_pred -EEeccccc-CCcccceeeEeCH-HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHH
Q 021893 125 -VILGKALG-GGVIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 125 -~s~sK~~~-~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~ 199 (306)
.|+||.++ +|+ |+||+++++ ++++.+.......+ +.+++++.++.++++... .+++.++++++++++.+.|++
T Consensus 239 ~~s~sK~~g~~G~-r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 316 (409)
T 2gb3_A 239 IDSVSKKFSACGA-RVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE 316 (409)
T ss_dssp EEESTTTTTCGGG-CCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecchhccCCccc-eEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899998 898 999999988 88887765433334 678888888888775321 133566777777778777777
Q ss_pred HHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHC------CceeccC---------CCCEEEEeCCCCCCH
Q 021893 200 IQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKER------GILAKPT---------HDTIVRLTPPLSISS 263 (306)
Q Consensus 200 ~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~------Gi~~~~~---------~~~~lRi~~~~~~t~ 263 (306)
. . ... ..+..|.++++.++ ..+..++++.|+++ ||.+.++ +++++|++++ +++
T Consensus 317 ~--g---~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~ 385 (409)
T 2gb3_A 317 H--G---LKRFTKPSGAFYITAELP----VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEK 385 (409)
T ss_dssp T--T---CCCBCCCSBSSEEEEECS----SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCH
T ss_pred c--C---ceeeeCCCeeEEEEEEeC----CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCH
Confidence 5 1 212 22345777777765 23567899999987 9999864 2679999976 899
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 021893 264 NELQEGSKALHDVLELDLP 282 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~~ 282 (306)
+++++++++|+++++ ++.
T Consensus 386 e~i~~~~~~l~~~l~-~~~ 403 (409)
T 2gb3_A 386 DLLSRAIDVLMEGLK-MFC 403 (409)
T ss_dssp HHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHH-Hhh
Confidence 999999999999998 764
No 94
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.91 E-value=3.4e-23 Score=189.08 Aligned_cols=229 Identities=14% Similarity=0.117 Sum_probs=164.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH-HHcCCEEEEehhhhcccccc---c----cccc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLC-SKYNILMIADEIQSGLARSG---R----MLAS 115 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~-~~~~~G~~~~~~~~l~~i~~l~-~~~gi~li~De~~~g~~~~g---~----~~~~ 115 (306)
.|++.|++++++. +++++|+++| ++|++|.+ .+.+.+++|.++| ++||+++|+||+|+.+...+ . .+.+
T Consensus 158 ~d~~~l~~~l~~~-~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 235 (423)
T 3ez1_A 158 PDVDAVERLAGTD-PSVKGILFVPTYSNPGGET-ISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVL 235 (423)
T ss_dssp ECHHHHHHHHHSC-TTEEEEEECSSSCTTTCCC-CCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHH
T ss_pred CCHHHHHHHHhhC-CCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhh
Confidence 3899999999632 5789998774 67888865 5788899999999 99999999999998432222 1 1111
Q ss_pred ----ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-Hh---h--ccHHHH
Q 021893 116 ----DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-IR---D--EKLAER 185 (306)
Q Consensus 116 ----~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-~~---~--~~~~~~ 185 (306)
+..+....+.|+||.+.+|+ |+||+++++++++.+.......+++.+.+.+.++.++++. .. . .+..+.
T Consensus 236 ~~~~~~~~~~i~~~S~sK~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 314 (423)
T 3ez1_A 236 ARDAGYPDRAFVFASTSKITFAGA-GLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAI 314 (423)
T ss_dssp HHHHTCTTSEEEEEESTTTSCSSS-SCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHH
T ss_pred hhccCCCCeEEEEeCchhhccCCc-ceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 12333445679999977899 9999999999998887665666777888988888887775 11 0 122334
Q ss_pred HHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEE
Q 021893 186 SAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVR 254 (306)
Q Consensus 186 ~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lR 254 (306)
++++.+.+.+.|.+.....+ ......+..|+++++.++. .+...+.+.|.++||.+.|+ ..+++|
T Consensus 315 ~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iR 390 (423)
T 3ez1_A 315 IAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE----PVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLR 390 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS----SCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEE
T ss_pred HHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC----CcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEE
Confidence 44455555555555433321 1222344678889998875 25678899999999999882 258999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 255 LTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++++.. +++++++++++|+++++ ++.
T Consensus 391 is~~~~-~~~~i~~~~~~l~~~l~-~~~ 416 (423)
T 3ez1_A 391 LAPTRP-PVEEVRTAMQVVAACIR-LAT 416 (423)
T ss_dssp ECCSSS-CHHHHHHHHHHHHHHHH-HHH
T ss_pred EEcCCC-CHHHHHHHHHHHHHHHH-HHH
Confidence 998544 99999999999999998 653
No 95
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.90 E-value=1.3e-23 Score=191.59 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=159.8
Q ss_pred CHHHHHHHHHhc--CCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHH------HcCCEEEEehhhhccccccc---cc
Q 021893 46 DITALEKIFKES--GDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCS------KYNILMIADEIQSGLARSGR---ML 113 (306)
Q Consensus 46 d~~~le~~i~~~--~~~~~~v~v~~~-~~~~G~~~~~~~~l~~i~~l~~------~~gi~li~De~~~g~~~~g~---~~ 113 (306)
|++.|++.++++ ++.+++++++++ +|++|.+ .+.+.+++|+++|+ +||+++|+||+|.++++.+. .+
T Consensus 163 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 241 (418)
T 3rq1_A 163 NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYS-IEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF 241 (418)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence 799999999852 123447777766 8999965 57888999999999 89999999999998876654 22
Q ss_pred ccccCCCCCc---E--EEeccccc-CCcccceeeEe---CHHHHhhcCCCCcc---CC-CCCCHHHHHHHHHHHHHHh--
Q 021893 114 ASDWEEVRPD---M--VILGKALG-GGVIPVSAVLA---DKEVMLCIQPGEHG---ST-FGGNPLASAVAIASLDVIR-- 178 (306)
Q Consensus 114 ~~~~~~~~~d---~--~s~sK~~~-~G~~~~g~~~~---~~~~~~~~~~~~~~---~~-~~~~~~~~~aa~~al~~~~-- 178 (306)
.....++.++ + .|+||.++ +|+ |+||+++ ++++++.+...... .+ ...+.+++.++.++++...
T Consensus 242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 320 (418)
T 3rq1_A 242 FNKFSHLPKEILTCVCYSLSKGFTMYGQ-RVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKF 320 (418)
T ss_dssp GGGGTTCCTTEEEEEEEESTTTTTCCSS-CCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhcCCCceEEEEEeCCCCCcCcCC-cceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHH
Confidence 1223344444 2 38999998 899 9999998 89988877643211 12 2467777777777664321
Q ss_pred ----h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCE
Q 021893 179 ----D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI 252 (306)
Q Consensus 179 ----~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~ 252 (306)
. .++.++++++.+.+.+.|++++ .....+..|.++|+.+. +..++++.|.++||.+.|+ +++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~g-~~~ 388 (418)
T 3rq1_A 321 KEYEAERNCYYQLIRDRADIFKQEAAQVG-----LPMLPYRGGFFITIPTD------SANAICEELKKEHIYVIAL-ANG 388 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCCCCCSSSEEEEECT------THHHHHHHHHHTTEECEEC-SSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCCCCceEEEEcCCC------CHHHHHHHHHhCCEEEecC-CCC
Confidence 1 2345667777777777777762 22223445666665442 4678889999999999997 678
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 253 VRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 253 lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+|+++. ..+++++++++++|+++++ ++.+
T Consensus 389 iRis~~-~~~~~~i~~~~~~l~~~l~-~~~~ 417 (418)
T 3rq1_A 389 IRIAAC-GIPKCQMTGLAEKIYNAMK-SLGK 417 (418)
T ss_dssp EEEEGG-GSCHHHHTTHHHHHHHHHH-HTTC
T ss_pred eEEEEe-cCCHHHHHHHHHHHHHHHH-HHhc
Confidence 999954 4699999999999999998 7653
No 96
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.90 E-value=8.9e-24 Score=191.97 Aligned_cols=223 Identities=16% Similarity=0.120 Sum_probs=160.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC-c-
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP-D- 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~-d- 123 (306)
|++.|++.++ +++++|++++++|++|.+ .+++.+++|.++|++||+++|+||+|+++.+.+...++..++... +
T Consensus 163 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i 238 (406)
T 1xi9_A 163 DIDDIRKKIT---DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVI 238 (406)
T ss_dssp CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEE
T ss_pred CHHHHHHhhC---cCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEE
Confidence 7999999987 468888888889999965 578999999999999999999999999875533322222222122 3
Q ss_pred -EEEeccccc-CCcccceeeE--eCH----HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893 124 -MVILGKALG-GGVIPVSAVL--ADK----EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL 193 (306)
Q Consensus 124 -~~s~sK~~~-~G~~~~g~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l 193 (306)
+.|+||.++ +|+ |+||++ .++ ++++.+....... ++.+++++.++.++++...+ +++.++++++++++
T Consensus 239 ~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 316 (406)
T 1xi9_A 239 VMNGLSKVYFATGW-RLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYI 316 (406)
T ss_dssp EEEESTTTTCCGGG-CCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccCCCcc-EEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 348899998 898 999999 888 8888776533333 66778888888888853211 33456666677777
Q ss_pred HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC------CCEEEEeCCCCCCHHHH
Q 021893 194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNEL 266 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~lRi~~~~~~t~~~i 266 (306)
.+.|+++ +++....+..|.++++.++.. .+.+..++++.|+ ++||.+.++. .+++|++++ ++++++
T Consensus 317 ~~~L~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i 389 (406)
T 1xi9_A 317 YKRLNEI----PGISTTKPQGAFYIFPKIEVG-PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEIL 389 (406)
T ss_dssp HHHHHTS----TTEECCCCCBSSEECCEECSC-SCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHH
T ss_pred HHHHHhC----CCCeeecCCeeEEEEEecCcc-CCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHH
Confidence 6666653 222222233466666666531 0135678999997 8899998752 679999975 899999
Q ss_pred HHHHHHHHHHHhhhcC
Q 021893 267 QEGSKALHDVLELDLP 282 (306)
Q Consensus 267 ~~~~~~l~~~l~~~~~ 282 (306)
++++++|+++++ ++.
T Consensus 390 ~~~~~~l~~~l~-~~~ 404 (406)
T 1xi9_A 390 EEAMDRFEKFMK-ERL 404 (406)
T ss_dssp HHHHHHHHHHHH-HC-
T ss_pred HHHHHHHHHHHH-HHh
Confidence 999999999998 653
No 97
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.90 E-value=2.2e-23 Score=190.64 Aligned_cols=226 Identities=16% Similarity=0.115 Sum_probs=165.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH-HHcCCEEEEehhhhcccccccc--c-cc-----
Q 021893 46 DITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLC-SKYNILMIADEIQSGLARSGRM--L-AS----- 115 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~-~~~~~G~~~~~~~~l~~i~~l~-~~~gi~li~De~~~g~~~~g~~--~-~~----- 115 (306)
|++.|+++++. +++++|+++| ++|++|.+ .+.+.+++|.++| ++||+++|+||+|+++.+.+.. . ..
T Consensus 168 d~~~l~~~l~~--~~~~~v~~~p~~~NPtG~~-~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 244 (427)
T 3ppl_A 168 DMDAVEELVKN--PQVKGMWVVPVFSNPTGFT-VTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGE 244 (427)
T ss_dssp CHHHHHHHTTS--TTEEEEEECCSSCTTTCCC-CCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHH
T ss_pred CHHHHHHHHhc--CCCeEEEECCCCCCCCCcc-CCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhh
Confidence 89999999953 5789998885 67888865 5788899999999 9999999999999974333321 1 11
Q ss_pred --ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h--ccHHHHHHH
Q 021893 116 --DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D--EKLAERSAH 188 (306)
Q Consensus 116 --~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~--~~~~~~~~~ 188 (306)
+..+..+++.|+||.+++|+ |+||+++++++++.+.......+++.+.+.+.++..+++... . .+..+.+++
T Consensus 245 ~~~~~~~~i~~~S~SK~~~~G~-r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 323 (427)
T 3ppl_A 245 AAGNPNRFWAFTSTSKITLAGA-GVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAP 323 (427)
T ss_dssp HTTCTTSEEEEEESTTTSCTTS-SCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEechhhccCcCc-cEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHH
Confidence 12344556779999977899 999999999998888765555667778888888777765411 1 223455556
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCC
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPP 258 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~ 258 (306)
+.+.+.+.|++.....+......+..|+++|+.++. .+..++.+.|.++||.+.|+ ..+++|+++.
T Consensus 324 ~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~ 399 (427)
T 3ppl_A 324 KFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP----GTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPS 399 (427)
T ss_dssp HHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECST----TCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS
T ss_pred HHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCc----chHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECC
Confidence 666666666654332211223345568889998874 25678899999999999882 3689999975
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhc
Q 021893 259 LSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 259 ~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.. +++++++++++|+++++ ++
T Consensus 400 ~~-~~~~i~~~~~~l~~~l~-~~ 420 (427)
T 3ppl_A 400 LP-PVEELEVAMDGVATCVL-LA 420 (427)
T ss_dssp SS-CHHHHHHHHHHHHHHHH-HH
T ss_pred CC-CHHHHHHHHHHHHHHHH-HH
Confidence 44 89999999999999988 65
No 98
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.90 E-value=2.1e-22 Score=179.69 Aligned_cols=248 Identities=14% Similarity=0.081 Sum_probs=170.5
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+....+.......... |..++ ...++++|+++++ + +++++++.++|++|.+ .+.+.
T Consensus 99 d~vi~~~~~~~~~~~~~~~~g~~~~~~----~~~~~----~~~~~~~l~~~l~---~-~~~v~i~~p~nptG~~-~~~~~ 165 (361)
T 3ftb_A 99 EKILIIVPSYAEYEINAKKHGVSVVFS----YLDEN----MCIDYEDIISKID---D-VDSVIIGNPNNPNGGL-INKEK 165 (361)
T ss_dssp SEEEEEESCCTHHHHHHHHTTCEEEEE----ECCTT----SCCCHHHHHHHTT---T-CSEEEEETTBTTTTBC-CCHHH
T ss_pred CcEEEecCChHHHHHHHHHcCCeEEEe----ecCcc----cCCCHHHHHHhcc---C-CCEEEEeCCCCCCCCC-CCHHH
Confidence 367777777777554443332211110 11100 0225689998887 3 7788888889999865 57888
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC---CcEEEeccccc-CCcccceeeE-eCHHHHhhcCCCCcc
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR---PDMVILGKALG-GGVIPVSAVL-ADKEVMLCIQPGEHG 157 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~---~d~~s~sK~~~-~G~~~~g~~~-~~~~~~~~~~~~~~~ 157 (306)
+++|.++|++||+++|+||+|+++.+.+........+.. ..+.|+||.++ +|+ |+||++ .++++++.+....
T Consensus 166 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~g~~~~~~~~~~~~~~~~~-- 242 (361)
T 3ftb_A 166 FIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGI-RFGYGITNNKEIAAKIKAKQ-- 242 (361)
T ss_dssp HHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGG-CCEEEEESCHHHHHHHHTTS--
T ss_pred HHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCc-ceeEEEeCCHHHHHHHHhhC--
Confidence 999999999999999999999977553111112222222 23448999999 898 999988 8999998887643
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHH
Q 021893 158 STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDIC 235 (306)
Q Consensus 158 ~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~ 235 (306)
.+++.+++++.++.++++.... ++..++++++.+.+++.|++ ++ .+. ..+..|.++++.++. .+..+++
T Consensus 243 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~-~~~~~~~~~~~~~~~~~~~----~~~~~l~ 313 (361)
T 3ftb_A 243 NPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNK----IG-FIKRVFSPHANFVLCRLEN----ISGEKLY 313 (361)
T ss_dssp CTTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH----SS-SEEEEECCSSSEEEEEESS----SCHHHHH
T ss_pred CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----CC-CCceecCCCCeEEEEEcCC----CCHHHHH
Confidence 3567888998888888763211 22344555555555555554 33 333 556678888887763 4577899
Q ss_pred HHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 236 LKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 236 ~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.|.++||.+.++ +.+++|++++ +.++++.+++.|+++.+
T Consensus 314 ~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 314 DSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp HHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 9999999999875 2689999954 78888899998887765
No 99
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.90 E-value=1e-23 Score=193.73 Aligned_cols=228 Identities=16% Similarity=0.227 Sum_probs=164.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc---ccccCCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML---ASDWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~---~~~~~~~~~ 122 (306)
|++.|+++++...+++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+.+. .+..+ .....+...
T Consensus 192 d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i 269 (444)
T 3if2_A 192 DFEALENLPALKEGRIGAICCSRPTNPTGNV-LTDEEMAHLAEIAKRYDIPLIIDNAYGMPF-PNIIYSDAHLNWDNNTI 269 (444)
T ss_dssp CHHHHHTCHHHHTTCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTCTTT-TCCBCSCCCCCCCTTEE
T ss_pred CHHHHHHHHHhcCCCceEEEeCCCCCCCCCc-CCHHHHHHHHHHHHHCCCEEEEECCCCCcc-cccccccccccCCCCEE
Confidence 8999998854423678999998888999965 578889999999999999999999997421 11111 111233445
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~l~~~L 197 (306)
++.|+||...+|+ |+||+++++++++.+....+..++..+++++.++.+.++.... +...++++++.+.+++.|
T Consensus 270 ~~~S~sK~~~~G~-r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (444)
T 3if2_A 270 LCFSLSKIGLPGM-RTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLL 348 (444)
T ss_dssp EEEESTTTTCGGG-CCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEechhhccCCCC-ceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5779999866899 9999999999988887655555666777888777776654221 123445556666666666
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--------------CCEEEEeCCCCCCH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--------------DTIVRLTPPLSISS 263 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------------~~~lRi~~~~~~t~ 263 (306)
++..... ++....+..|.++|+.++.. ..+..++++.|.++||.+.|+. .+++|++++. ++
T Consensus 349 ~~~l~~~-~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~ 423 (444)
T 3if2_A 349 KQALGDY-PLMIHKPEGAIFLWLWFKDL--PISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DE 423 (444)
T ss_dssp HHHSSSS-SEEEECCCBSSEEEEEETTC--SSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CH
T ss_pred HHhcccC-CceEecCCccEEEEEEcCCC--CCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CH
Confidence 6543221 12233346788888888741 2467789999999999998741 1589999765 99
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 021893 264 NELQEGSKALHDVLELDLP 282 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~~ 282 (306)
++|++++++|+++++ ++.
T Consensus 424 e~i~~~l~~l~~~~~-~~~ 441 (444)
T 3if2_A 424 QTLIDGIKVIGEVVR-ELY 441 (444)
T ss_dssp HHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHH-HHH
Confidence 999999999999998 654
No 100
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.90 E-value=2.3e-22 Score=180.69 Aligned_cols=219 Identities=15% Similarity=0.145 Sum_probs=163.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+|++|+.. . ..+....+ .+|+
T Consensus 114 ~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~--~~~~~~~~--~~d~ 182 (384)
T 3zrp_A 114 VKPGEVEEEVRKS--EYKLVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSSVG-A--EEVKAEEW--NVDV 182 (384)
T ss_dssp CCHHHHHHHHHHS--CEEEEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTTTT-T--SCCCTTTT--TCSE
T ss_pred CCHHHHHHHHHhC--CCcEEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECccccc-C--cccccccc--CCCE
Confidence 3899999999963 6999999999999998887 999999999999999999999721 1 11212222 3455
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhc-CCCC---------------------ccCCC-CCCHHHHHHHHHHHHHHhh
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCI-QPGE---------------------HGSTF-GGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~-~~~~---------------------~~~~~-~~~~~~~~aa~~al~~~~~ 179 (306)
+ +++|+++|+. ++|++++++++++.+ .+.. ....+ +.+...+.++.++++.+..
T Consensus 183 ~~~s~~K~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~ 261 (384)
T 3zrp_A 183 YLTASQKALGSAA-GLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK 261 (384)
T ss_dssp EEEETTSTTCCCS-SEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEecCcccccCCC-ceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 5 6669999887 899999999988776 2110 11222 4566677777778877654
Q ss_pred ---ccHHHHHHHHHHHHHHHHHHHHhhCCCceee--EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-C--C
Q 021893 180 ---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-D--T 251 (306)
Q Consensus 180 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~--~ 251 (306)
+++.++++++.+++.+.|++.. +. .... ....+.++++.++. .+..++.+.|.++||.+.++. . +
T Consensus 262 ~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~ 334 (384)
T 3zrp_A 262 EGIENRIKRHTMVASAIRAGLEALG--LE-IVARRPESYSNTVTGVILKV----ADPQKVLAGTVNEGVEFAPGVHPAFK 334 (384)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTT--CC-BSCSSGGGBCSSEEEEECSS----SCHHHHHHHHHTTTCCCEECCCTTCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHCC--Ce-EccCcccccCccEEEEECCC----CCHHHHHHHHHHCCEEEecCCCCCcC
Confidence 3567788888888888888762 21 1111 11246667777663 457889999999999998763 1 7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 252 IVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
++|++++..++++++++++++|+++++ ++..
T Consensus 335 ~iRi~~~~~~~~e~i~~~~~~l~~~l~-~~~~ 365 (384)
T 3zrp_A 335 YFRIGHMGWVTPNDAIIAISVIERTLR-KLGE 365 (384)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHHHH-HHTC
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHH-HcCC
Confidence 899999888999999999999999999 7653
No 101
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.90 E-value=2.1e-23 Score=186.62 Aligned_cols=213 Identities=17% Similarity=0.160 Sum_probs=156.9
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc--cc-cccc----ccc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR--SG-RMLA----SDW 117 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~--~g-~~~~----~~~ 117 (306)
.|+++|+++++ +++++|+++.++|++|.+. +.+.+++|+++| ++|+++|+||+|+++.+ .+ .... .+.
T Consensus 141 ~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 215 (365)
T 3get_A 141 DEFKKLYETHK---DEIKLIFLCLPNNPLGECL-DASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE 215 (365)
T ss_dssp HHHHHHHHHTT---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH
T ss_pred CCHHHHHHHhC---CCCCEEEEcCCCCCCCCCc-CHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhcc
Confidence 36788888887 5799999988999999765 566677777766 67999999999997652 22 2111 122
Q ss_pred CCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHH
Q 021893 118 EEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQ 195 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~ 195 (306)
.+....+.|+||.++ +|+ |+||+++++++++.+.... ..++.+++++.++.++++.... ++..++++++.+++++
T Consensus 216 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 292 (365)
T 3get_A 216 FDNVLYLGTFSKLYGLGGL-RIGYGIANANIISAFYKLR--APFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKE 292 (365)
T ss_dssp CTTEEEEEESSSTTSCTTT-CCEEEEECHHHHHHHHHHS--CTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecchHhcCcch-heEEEEcCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 333345569999998 899 9999999999988776532 2456788888888888864311 3345666667777777
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCCCCCHHHHHHHHHH
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKA 272 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~~~t~~~i~~~~~~ 272 (306)
.|++.. .. ..+..|.++++.++. . +..++.+.|.++||.+.++. .+++|++++ +++++++++++
T Consensus 293 ~l~~~g-----~~-~~~~~~~~~~~~~~~---~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~ 359 (365)
T 3get_A 293 FAKKHN-----IK-IIDSYTNFITYFFDE---K-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTE 359 (365)
T ss_dssp HHHHTT-----CE-ECCCSSSEEEEECSS---S-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHH
T ss_pred HHHhCC-----CE-ECCCCCeEEEEECCC---C-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHH
Confidence 776651 21 234567778887764 2 67889999999999999875 689999954 89999999999
Q ss_pred HHHHHh
Q 021893 273 LHDVLE 278 (306)
Q Consensus 273 l~~~l~ 278 (306)
|+++++
T Consensus 360 l~~~l~ 365 (365)
T 3get_A 360 FDKILR 365 (365)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998763
No 102
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.90 E-value=8e-23 Score=185.22 Aligned_cols=223 Identities=17% Similarity=0.215 Sum_probs=165.8
Q ss_pred cccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS 115 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~ 115 (306)
+..+|++|+++||+++++.. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ | +++.|..+.
T Consensus 156 ~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~- 230 (401)
T 2bwn_A 156 KRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA- 230 (401)
T ss_dssp EEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH-
T ss_pred EEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee-
Confidence 45677789999999998654 47899999999999999888 9999999999999999999999 3 455555442
Q ss_pred ccCCC----CCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHHhh---ccHHHHH
Q 021893 116 DWEEV----RPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRD---EKLAERS 186 (306)
Q Consensus 116 ~~~~~----~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~ 186 (306)
...++ .+.+.|+||+++. +.||+++++++++.+..... ..+...++++++++.++++.+.. ++..+++
T Consensus 231 ~~~~~~~~~~i~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 307 (401)
T 2bwn_A 231 ERDGLMHRIDIFNGTLAKAYGV---FGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQ 307 (401)
T ss_dssp HHHTCGGGCSEEEEESSSTTCS---CCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred eccCccccCcEEEeechhhccC---CCCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 22232 3345599999982 11568889888876653211 11122356788888889988765 3578888
Q ss_pred HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCC
Q 021893 187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPP 258 (306)
Q Consensus 187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~ 258 (306)
+++++++++.|++.. +. .. ...+.++++.++. ..+..++++.|+ ++||.+.|. +.+++|++++
T Consensus 308 ~~~~~~l~~~L~~~g--~~-~~---~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~ 378 (401)
T 2bwn_A 308 QMHAKVLKMRLKALG--MP-II---DHGSHIVPVVIGD---PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPS 378 (401)
T ss_dssp HHHHHHHHHHHHHHT--CC-BC---CCSSSCEEEECCC---HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCC
T ss_pred HHHHHHHHHHHHHCC--Cc-cc---CCCCCeEEEEeCC---hHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEee
Confidence 999999999998862 21 11 2234577887763 356778999996 789999764 2358999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 021893 259 LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 259 ~~~t~~~i~~~~~~l~~~l~ 278 (306)
..++++++++++++|+++++
T Consensus 379 ~~~t~~~i~~~~~~l~~~~~ 398 (401)
T 2bwn_A 379 PVHDLKQIDGLVHAMDLLWA 398 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 88999999999999998877
No 103
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=2.3e-22 Score=179.33 Aligned_cols=222 Identities=14% Similarity=0.144 Sum_probs=165.2
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
..|+++|+++++++ .++++|++.++++++|.+.+ +++|.++|++||+++|+||+|+. +..+ +.... ..+|
T Consensus 116 ~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~~--~~~~~--~~~d 185 (366)
T 1m32_A 116 RPDVQAIDAILNAD-PTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSSF-GGIP--MDIAA--LHID 185 (366)
T ss_dssp CCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTTT-TTSC--CCTTT--TTCS
T ss_pred CCCHHHHHHHHhcC-CCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCccc-cCcC--ccccc--cCcc
Confidence 36899999999864 35778888888889998887 99999999999999999999982 2221 22222 2356
Q ss_pred EE--EecccccCCcccceeeEeCHHHHhhcCCCCc------------------cCCCCCCHHHHHHHHHHHHHHhhc---
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH------------------GSTFGGNPLASAVAIASLDVIRDE--- 180 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~aa~~al~~~~~~--- 180 (306)
++ |++|+++++. ++|++++++++++.+..... ...++.+..+++++.++++.+.+.
T Consensus 186 i~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~ 264 (366)
T 1m32_A 186 YLISSANKCIQGVP-GFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGV 264 (366)
T ss_dssp EEEEESSSTTCCCS-SEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred EEEecCcccccCCC-ceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCH
Confidence 55 6789998777 88999999999887765311 012567788888888888877543
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEE
Q 021893 181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRL 255 (306)
Q Consensus 181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi 255 (306)
+..++++++++++++.|+++. +. ..... ...+.++++.+++. .+.+..++.+.|.++||.+.++ ..+++|+
T Consensus 265 ~~~~~~~~~~~~~l~~~L~~~~--~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi 340 (366)
T 1m32_A 265 AARHQRYQQNQRSLVAGMRALG--FN-TLLDDELHSPIITAFYSPED-PQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRI 340 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--CC-BSSCGGGBCSSEEEEECCCC-TTCCHHHHHHHHHHTTEECEECCCSSSCEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHCC--Ce-eccCchhcCceEEEEEcCcc-CCCCHHHHHHHHHHCCEEEECCcCCCCCEEEE
Confidence 367788888888888888752 21 11110 13566788877631 0235778999999999999876 4689999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 256 TPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 256 ~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++..++++++++++++|+++++ ++
T Consensus 341 ~~~~~~~~~~i~~~~~~l~~~~~-~~ 365 (366)
T 1m32_A 341 GNIGEVYAADITALLTAIRTAMY-WT 365 (366)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHCT-TC
T ss_pred ecCCCCCHHHHHHHHHHHHHHHH-hc
Confidence 99888899999999999998887 53
No 104
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.90 E-value=9.3e-24 Score=193.36 Aligned_cols=262 Identities=11% Similarity=0.056 Sum_probs=171.7
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+|++.+.+|++....+........... ....+..+..++.++-+.+...+++. +++++|+++.++|++|.+ ++.+
T Consensus 142 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~v~l~~p~NPtG~~-~~~~ 218 (432)
T 3ei9_A 142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNT-DVQKYGNIEYMRCTPENGFFPDLSTV-GRTDIIFFCSPNNPTGAA-ATRE 218 (432)
T ss_dssp TCCEEEEESCCTHHHHHHHHHTCSCCEET-TTTEETTCEEEECCGGGTTSCCGGGC-CCCSEEEEESSCTTTCCC-CCHH
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCcccccc-cccccCceEEeccCcccCCcCChhhC-CCCCEEEEeCCCCCCCCC-CCHH
Confidence 35788888888876555443332111110 00111223344443211111112222 467788888889999865 5788
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccC----CCCCcEEEeccccc-CCcccceeeEeCHHH--------H
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE----EVRPDMVILGKALG-GGVIPVSAVLADKEV--------M 148 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~--------~ 148 (306)
.+++|.++|++||++||+||+|+++...+........ +....+.|+||.++ +|+ |+||+++++++ +
T Consensus 219 ~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-r~G~~~~~~~~~~~~~~~~~ 297 (432)
T 3ei9_A 219 QLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGV-RLGWTVIPKKLLYSDGFPVA 297 (432)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTT-CCEEEECCTTCBCTTSCBHH
T ss_pred HHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCccc-ceEEEEEChHHhhcchHHHH
Confidence 9999999999999999999999987544433222221 22334669999999 999 99999998877 4
Q ss_pred hhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC
Q 021893 149 LCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 225 (306)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~ 225 (306)
+.+........++.+++++.++.++++... .++..++++++.+++++.|++.+ +....+..+.++|+.++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~~- 371 (432)
T 3ei9_A 298 KDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLG-----YDVYGGKNAPYVWVHFPN- 371 (432)
T ss_dssp HHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEECSSSSEEEEECTT-
T ss_pred HHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCcceEEEEECCC-
Confidence 554432233344568888888887774321 13456777788888888887752 222233467788888762
Q ss_pred CChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 226 ALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 226 ~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+..++++.|+++ ||.+.|+ +++++|++ +..+++++++++++|++--.
T Consensus 372 ---~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 372 ---QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AFGHRENILEACRRFKQLYK 426 (432)
T ss_dssp ---SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHhh
Confidence 4567888888765 9999874 36899999 56799999999999987554
No 105
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.90 E-value=4.8e-23 Score=186.97 Aligned_cols=220 Identities=17% Similarity=0.131 Sum_probs=163.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+.. ...+....++.+..+.
T Consensus 126 d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~---~~~~~~~~~~~d~~~~ 196 (411)
T 3nnk_A 126 TPDQVEDAVKRI--RPRLLLTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATASLG---GNPLETDVWGLDAVSA 196 (411)
T ss_dssp CHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTTBT---TBCCCTTTTTCSEEEC
T ss_pred CHHHHHHHHhhC--CCeEEEEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCcccC---CcccchhccCCcEEEe
Confidence 899999999853 6889999999999999887 999999999999999999998721 1122233333333334
Q ss_pred EecccccCCcccceeeEeCHHHHhhcCCCC------------------------------------ccCCCCCCHHHHHH
Q 021893 126 ILGKALGGGVIPVSAVLADKEVMLCIQPGE------------------------------------HGSTFGGNPLASAV 169 (306)
Q Consensus 126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~a 169 (306)
+++|+++++. ++|++++++++++.+.+.. ....++.+..++.+
T Consensus 197 s~~K~l~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 275 (411)
T 3nnk_A 197 GMQKCLGGPS-GTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFG 275 (411)
T ss_dssp CSTTTTCCCS-SEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHH
T ss_pred cCccccCCCC-ceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHH
Confidence 6669988887 8999999999887765422 01223457777777
Q ss_pred HHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cce
Q 021893 170 AIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GIL 244 (306)
Q Consensus 170 a~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~ 244 (306)
+.++++.+..+ +..++++++++++++.|++.... ... .....+.++++.+++ ..+..++.+.|+++ ||.
T Consensus 276 ~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~ 349 (411)
T 3nnk_A 276 ARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLE---TFGDLKHKMNNVLGVVIPQ---GINGDQARKLMLEDFGIE 349 (411)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC---BCSCGGGBCSSEEEEECCT---TCCHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCE---eCCCcccccccEEEEECCC---CCCHHHHHHHHHHhcCeE
Confidence 77888876553 56778888888888888876211 111 112246677777753 34677899999887 999
Q ss_pred eccC----CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 245 AKPT----HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 245 ~~~~----~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+.++ .++++|+++ +..++++++++++++|+++++ ++.
T Consensus 350 v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~-~~~ 391 (411)
T 3nnk_A 350 IGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLN-YLK 391 (411)
T ss_dssp EEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HTT
T ss_pred EeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHH-HcC
Confidence 9874 467999997 667799999999999999999 764
No 106
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.90 E-value=2.2e-22 Score=182.15 Aligned_cols=252 Identities=16% Similarity=0.167 Sum_probs=169.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+|++...+|||.......+.........+.|...+ -..|++.|+++++ +++++|++++++|++|.+.+
T Consensus 113 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~--- 182 (406)
T 1kmj_A 113 GDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD----GTLQLETLPTLFD---EKTRLLAITHVSNVLGTENP--- 182 (406)
T ss_dssp TCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT----SCBCGGGHHHHCC---TTEEEEEEESBCTTTCCBCC---
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC----CCcCHHHHHHHhc---cCCeEEEEeCCCccccCcCC---
Confidence 3578999999988764322111100001001111111 1237899999887 47899999999999998887
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCccCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 159 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (306)
+++|.++|++||+++|+||+|+.. .. .+..... .+|+ .|++|.++ +. ++|++++++++++.+.+.....+
T Consensus 183 -l~~i~~l~~~~~~~li~D~~~~~g-~~--~~~~~~~--~~d~~~~s~~K~~g-~~-G~G~~~~~~~~~~~~~~~~~~~~ 254 (406)
T 1kmj_A 183 -LAEMITLAHQHGAKVLVDGAQAVM-HH--PVDVQAL--DCDFYVFSGHKLYG-PT-GIGILYVKEALLQEMPPWEGGGS 254 (406)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTTT-TS--CCCHHHH--TCSEEEEEGGGTTS-CT-TCEEEEECHHHHHHCCCSSCSTT
T ss_pred -HHHHHHHHHHcCCEEEEEchhhcC-CC--CCccccc--CCCEEEEEchhccC-CC-CcEEEEEeHHHHhhcCCcccCCC
Confidence 999999999999999999999832 11 1112222 3555 47899884 33 47999999999988876442211
Q ss_pred ---------------------CCCCHHHHHHHH-HHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-
Q 021893 160 ---------------------FGGNPLASAVAI-ASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG- 213 (306)
Q Consensus 160 ---------------------~~~~~~~~~aa~-~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~- 213 (306)
...+.+.+.++. ++++.+.+ +++.++++++.+++++.|+++ ++. .....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~ 329 (406)
T 1kmj_A 255 MIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV----PDL-TLYGPQ 329 (406)
T ss_dssp SEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS----TTE-EEESCT
T ss_pred ceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC----CCe-EEecCC
Confidence 123444444444 77777754 245666777777777777653 212 22223
Q ss_pred -eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893 214 -RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 214 -~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~ 280 (306)
.+.++.+.++ ..+..++.+.|.++||.+.++. ++++|++++..++++|++.++++|+++++ .
T Consensus 330 ~~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~-~ 404 (406)
T 1kmj_A 330 NRLGVIAFNLG----KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR-L 404 (406)
T ss_dssp TCCSEEEEEET----TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH-H
T ss_pred CcCCEEEEEEC----CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH-h
Confidence 5667777664 2356788999999999988642 58999999988899999999999999887 5
Q ss_pred c
Q 021893 281 L 281 (306)
Q Consensus 281 ~ 281 (306)
+
T Consensus 405 l 405 (406)
T 1kmj_A 405 L 405 (406)
T ss_dssp H
T ss_pred h
Confidence 4
No 107
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=2.4e-23 Score=186.44 Aligned_cols=248 Identities=13% Similarity=0.113 Sum_probs=177.2
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--CC-----CHHHHHHHHHhcC--CcEEEEEEccccCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--FG-----DITALEKIFKESG--DQIAGFLFEPIQGE 72 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----d~~~le~~i~~~~--~~~~~v~v~~~~~~ 72 (306)
+.+|++.+.+||+....+..... .++.++ .+ |+++|++.++++. +++++|++++++|+
T Consensus 93 gd~vl~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~np 159 (371)
T 2e7j_A 93 DAWVVMDENCHYSSYVAAERAGL-------------NIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGN 159 (371)
T ss_dssp TCEEEEETTCCHHHHHHHHHTTC-------------EEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTT
T ss_pred CCEEEEccCcchHHHHHHHHcCC-------------eEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCC
Confidence 35677777788776554322111 112222 22 8999999998642 46899999999999
Q ss_pred CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh-c
Q 021893 73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC-I 151 (306)
Q Consensus 73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~-~ 151 (306)
+|.+.+ +++|.++|++||+++|+||+|+++. .+ +....++.+..+.|+||+++++. |+|++++++++++. +
T Consensus 160 tG~~~~----~~~i~~~~~~~~~~li~D~a~~~~~-~~--~~~~~~~~di~~~s~sK~~~~~~-~~G~~~~~~~~~~~~~ 231 (371)
T 2e7j_A 160 YGNLPD----VKKIAKVCSEYDVPLLVNGAYAIGR-MP--VSLKEIGADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVL 231 (371)
T ss_dssp TCCCCC----HHHHHHHHHTTTCCEEEECTTTBTT-BC--CCHHHHTCSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTT
T ss_pred CcccCC----HHHHHHHHHHcCCeEEEECccccCC-CC--CChhhcCCCEEEecCCcCCCCCC-CcEEEEEechhhhhhc
Confidence 999888 8999999999999999999998532 11 22222333333447799999888 99999999998887 7
Q ss_pred CCCCc--cC-----CCCCCHHHHHHHHHHHHHHhhccHHHHH--HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893 152 QPGEH--GS-----TFGGNPLASAVAIASLDVIRDEKLAERS--AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222 (306)
Q Consensus 152 ~~~~~--~~-----~~~~~~~~~~aa~~al~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~ 222 (306)
.+... .. .++.++..++++.++++.+.. ++.+++ +++++++++.|++. .+. ........+.++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~--~~~-~~~~~~~~~~~~~~~~ 307 (371)
T 2e7j_A 232 RRSEKYKNKEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEMEKL--GIK-QLGDNPHNHDLMFFHA 307 (371)
T ss_dssp CBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHT--TCE-EESSSSCCSSEEEEEC
T ss_pred cccccCcccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc--CcE-EecCCCccCceEEEEC
Confidence 65433 22 445677777777788887765 566777 88888888888876 210 1111111466777766
Q ss_pred ecCCChhhHHHHHHHHHHCCceeccC-------C--CCEEE-EeCCCC-CCHHHHHHHHHHHHHHHhhhc
Q 021893 223 DKTALPVSAYDICLKMKERGILAKPT-------H--DTIVR-LTPPLS-ISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~--~~~lR-i~~~~~-~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+ +..++.+.|.++||.+.|. + ++++| ++++.. ++++++++++++|+++++ ++
T Consensus 308 ~------~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~-~~ 370 (371)
T 2e7j_A 308 E------VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIE-KY 370 (371)
T ss_dssp H------HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred C------CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHH-hc
Confidence 4 4567899999999998761 1 57899 998776 899999999999999987 54
No 108
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.89 E-value=7.9e-23 Score=189.02 Aligned_cols=263 Identities=17% Similarity=0.133 Sum_probs=180.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVI 76 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~ 76 (306)
+.+||+...+||+........... .+..+....+...|. -|+++|+++|+++.+++++|++++++|++|.+
T Consensus 155 ~~~Vl~~~~~~~s~~~~~~~~~~~----~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~ 230 (465)
T 3e9k_A 155 RYKILLEAKAFPSDHYAIESQLQL----HGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQH 230 (465)
T ss_dssp SCEEEEETTCCHHHHHHHHHHHHH----TTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBB
T ss_pred CCEEEEcCCcCCchHHHHHHHHHH----cCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCccee
Confidence 346888888998866543322110 000000000011111 27999999998765689999999999999999
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH 156 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~ 156 (306)
.+ +++|.++|++||+++|+|++|+. +. ..+....++.+..+.|++|.+++|..++|++++++++.+.+.+...
T Consensus 231 ~~----l~~i~~la~~~g~~vi~D~a~~~-g~--~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~ 303 (465)
T 3e9k_A 231 FN----IPAITKAGQAKGCYVGFDLAHAV-GN--VELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALV 303 (465)
T ss_dssp CC----HHHHHHHHHHTTCEEEEECTTTT-TT--SCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSC
T ss_pred ec----HHHHHHHHHHcCCEEEEEhhhhc-CC--cCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCccc
Confidence 88 99999999999999999999972 11 1122223333333446779996444268999999998777664321
Q ss_pred c---C----------------------CCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhh-----
Q 021893 157 G---S----------------------TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQ----- 203 (306)
Q Consensus 157 ~---~----------------------~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~----- 203 (306)
+ + ..+.+.++++++.++++.+.+ +++.++.+++.+++.+.|++....
T Consensus 304 g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 383 (465)
T 3e9k_A 304 GWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAAT 383 (465)
T ss_dssp CGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred CccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 1 0 014567778888888888765 457788888888888888875210
Q ss_pred -CCCceee----EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 021893 204 -FPNYVKE----VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 204 -~~~~~~~----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.... ....|.++++.++. +..++.+.|.++||.+....++++|+++ +..++.+|++++++.|++++
T Consensus 384 ~~~g~~~~~p~~~~~~g~~~~~~~~~-----~~~~l~~~L~~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l 458 (465)
T 3e9k_A 384 KKPVVNIITPSHVEERGCQLTITFSV-----PNKDVFQELEKRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSIL 458 (465)
T ss_dssp ---CEEECSCSSGGGBCSCEEEEECC-----TTCCHHHHHHTTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEeCCCCHhhcccEEEEEecC-----CHHHHHHHHHHCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHH
Confidence 0111111 11247788887762 3457899999999999877789999998 89999999999999999999
Q ss_pred hhhc
Q 021893 278 ELDL 281 (306)
Q Consensus 278 ~~~~ 281 (306)
+ +.
T Consensus 459 ~-~~ 461 (465)
T 3e9k_A 459 D-SA 461 (465)
T ss_dssp T-C-
T ss_pred H-hc
Confidence 8 54
No 109
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.89 E-value=2e-22 Score=181.46 Aligned_cols=211 Identities=16% Similarity=0.160 Sum_probs=157.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH----HcCCEEEEehhhhcccccccccccccCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS----KYNILMIADEIQSGLARSGRMLASDWEEV 120 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~----~~gi~li~De~~~g~~~~g~~~~~~~~~~ 120 (306)
.|++.|++.++ +++++|++++++|++|.+.+ +++|.++|+ +||+++|+||+|+ ++.. .+... ..
T Consensus 142 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~--~~~~~--~~ 209 (390)
T 1elu_A 142 DAAAVLANHLG---PKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSL--PLDFS--RL 209 (390)
T ss_dssp CHHHHHHTTCC---TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTB--CCCTT--TS
T ss_pred chHHHHHHhcC---CCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCc--CCChh--hc
Confidence 36888888886 47999999999999999888 999999999 9999999999998 3222 12122 23
Q ss_pred CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCC----------------------ccCCCCCCHHHHHHHHHHHHH
Q 021893 121 RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE----------------------HGSTFGGNPLASAVAIASLDV 176 (306)
Q Consensus 121 ~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~aa~~al~~ 176 (306)
.+|++ |++|++.||. ++|++++++++++.+.+.. .....+.+.+++.++.++++.
T Consensus 210 ~~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 288 (390)
T 1elu_A 210 EVDYYAFTGHKWFAGPA-GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQL 288 (390)
T ss_dssp CCSEEEEESSSTTCCCT-TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEccccccccCCC-ceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHH
Confidence 45655 6889888888 9999999999988876532 112234567777777788887
Q ss_pred Hhhcc----HHHHHHHHHHHHHHHHHHHHhhCCCceeeE--EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-
Q 021893 177 IRDEK----LAERSAHLGEELRQHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH- 249 (306)
Q Consensus 177 ~~~~~----~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~- 249 (306)
+.+.+ ..++++++++++.+.|+++ ++..... +..+.++.+.++. +.+..++.+.|.++||.+.++.
T Consensus 289 l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~ 361 (390)
T 1elu_A 289 HQRQGTAEERYQAICQRSEFLWRGLNQL----PHVHCLATSAPQAGLVSFTVDS---PLGHRAIVQKLEEQRIYLRTIAD 361 (390)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHS----TTEEESCSSCCSSSEEEEEECS---SSCHHHHHHHHHHTTEECEEETT
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHhc----CCcEEecCccccccEEEEEcCC---CCCHHHHHHHHHHCCEEEEecCC
Confidence 75533 5667777777777777764 1121111 3457777777753 3457789999999999999874
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 250 DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 250 ~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
++++|++++...+++++++++++|++
T Consensus 362 ~~~iRis~~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 362 PDCIRACCHYITDEEEINHLLARLAD 387 (390)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred CCeEEEecccCCCHHHHHHHHHHHHh
Confidence 68999999888999999999998864
No 110
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.89 E-value=2.8e-23 Score=189.06 Aligned_cols=223 Identities=14% Similarity=0.144 Sum_probs=160.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c--cccCCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A--SDWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~--~~~~~~~~ 122 (306)
|++.|+ ++ ++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+.+. .+..+ . ....+...
T Consensus 171 d~~~l~--~~---~~~~~v~~~~p~NptG~~-~~~~~~~~l~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i 243 (417)
T 3g7q_A 171 DFEHLH--IG---EETGMICVSRPTNPTGNV-ITDEELMKLDRLANQHNIPLVIDNAYGVPF-PGIIFSEARPLWNPNII 243 (417)
T ss_dssp CGGGCC--CC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTCTTT-TCCBCSCCCCCCCTTEE
T ss_pred CHHHhc--cc---cCceEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEeCCCcccc-ccccccccccCCCCCEE
Confidence 677776 33 578999999999999965 578889999999999999999999997431 11111 0 11123334
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~l~~~L 197 (306)
.+.|+||...+|+ |+||+++++++++.+....+..+++.+++++.++.+.++...- +...++++++.+.+.+.|
T Consensus 244 ~~~s~sK~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (417)
T 3g7q_A 244 LCMSLSKLGLPGS-RCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAII 322 (417)
T ss_dssp EEEESGGGTCTTS-CCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEechhccCCCc-ceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4679999655899 9999999999998887655556677788888887777753211 113445566666666666
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------CCEEEEeCCCCCCHH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------DTIVRLTPPLSISSN 264 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------~~~lRi~~~~~~t~~ 264 (306)
++..... ++....+..|.++|+.++.. ..+..++++.|.++||.+.|+. .+++|++++. +++
T Consensus 323 ~~~l~~~-~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~ 397 (417)
T 3g7q_A 323 RRYLSEE-RCLIHKPEGAIFLWLWFKDL--PITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPD 397 (417)
T ss_dssp HHHCCTT-TCEEECCCBSSEEEEECTTC--SSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHH
T ss_pred HHhcccC-CceeeCCCcceEEEEEcCCC--CCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHH
Confidence 6543221 12333456788888888641 2467889999999999998741 4699999763 999
Q ss_pred HHHHHHHHHHHHHhhhcC
Q 021893 265 ELQEGSKALHDVLELDLP 282 (306)
Q Consensus 265 ~i~~~~~~l~~~l~~~~~ 282 (306)
++++++++|+++++ ++.
T Consensus 398 ~i~~~~~~l~~~l~-~~~ 414 (417)
T 3g7q_A 398 KIEAGVKILAEEIE-RAW 414 (417)
T ss_dssp HHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHH-HHH
Confidence 99999999999998 653
No 111
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.89 E-value=1.2e-22 Score=181.73 Aligned_cols=251 Identities=16% Similarity=0.177 Sum_probs=164.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+....+.......... |..+.. .+..++.+.+.+. +++++++++.++|++|.+ .+.++
T Consensus 99 d~vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~---~~~~l~~~~~~~~---~~~~~v~i~~p~nptG~~-~~~~~ 167 (364)
T 1lc5_A 99 RRAMIVTPGFAEYGRALAQSGCEIRRW----SLREAD---GWQLTDAILEALT---PDLDCLFLCTPNNPTGLL-PERPL 167 (364)
T ss_dssp SEEEEEESCCTHHHHHHHHTTCEEEEE----ECCGGG---TTCCCTTHHHHCC---TTCCEEEEESSCTTTCCC-CCHHH
T ss_pred CeEEEeCCCcHHHHHHHHHcCCeEEEE----eCCccc---ccchhHHHHHhcc---CCCCEEEEeCCCCCCCCC-CCHHH
Confidence 578888999988665544332211100 111100 0000233333332 467777777778888865 57899
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccc-cc-cccCCCCCcEEEeccccc-CCcccceeeE-eCHHHHhhcCCCCccC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRM-LA-SDWEEVRPDMVILGKALG-GGVIPVSAVL-ADKEVMLCIQPGEHGS 158 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~-~~~~~~~~~~~~~~~~ 158 (306)
+++|.++|++||+++|+||+|+++.+.+.. +. .+..+....+.|+||.++ +|+ |+||++ +++++++.+.... .
T Consensus 168 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~~--~ 244 (364)
T 1lc5_A 168 LQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGL-RLGYLVNSDDAAMARMRRQQ--M 244 (364)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTT-CCEEEECCCHHHHHHHHHHS--C
T ss_pred HHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCcc-ceEEEEECCHHHHHHHHHhC--C
Confidence 999999999999999999999977544322 21 122333444569999998 899 999999 8999888776422 3
Q ss_pred CCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHH
Q 021893 159 TFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK 237 (306)
Q Consensus 159 ~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 237 (306)
+++.+++++.++.++++... -++..++++++++++.+.|++ .++. ...+..|.++++.++. ...++++.
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~~~~g~~~~~~~~~-----~~~~l~~~ 314 (364)
T 1lc5_A 245 PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQ----LPLL-TVYPGRANYLLLRCER-----EDIDLQRR 314 (364)
T ss_dssp TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHT----STTE-EECCCSSSEEEEEESC-----TTCCHHHH
T ss_pred CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc----CCCC-EECCCCCeEEEEECCC-----cHHHHHHH
Confidence 56778888888887776421 122344455555555555544 2222 2334567788887753 23468899
Q ss_pred HHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 238 MKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 238 l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|.++||.+.++. ++++|+++ .+.++++++++.|+++++ ++
T Consensus 315 l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~-~~ 360 (364)
T 1lc5_A 315 LLTQRILIRSCANYPGLDSRYYRVAI---RSAAQNERLLAALRNVLT-GI 360 (364)
T ss_dssp HHTTTEECEECTTSTTCCTTEEEEEC---CCHHHHHHHHHHHHHHC----
T ss_pred HHHCCcEEeeCcccCCCCCCEEEEEe---CCHHHHHHHHHHHHHHhh-cc
Confidence 999999998752 57999994 368899999999998887 55
No 112
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.89 E-value=4.5e-22 Score=178.52 Aligned_cols=214 Identities=17% Similarity=0.181 Sum_probs=151.9
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|+++++ ++++++++++++|++|.+.+ +++|.++|++||+++|+|++|+..+. .+..+.++.+..+
T Consensus 132 ~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~---~~~~~~~~~d~~~ 201 (376)
T 3f0h_A 132 LTKEKLYEYDN---QNFTGLLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLAD---PFNMNECGADVMI 201 (376)
T ss_dssp CCHHHHHTTTT---SCCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHHTCSEEE
T ss_pred CCHHHHHHhhc---cCceEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCc---cccccccCccEEE
Confidence 37899988765 57899999999999998887 99999999999999999999984322 2223344444556
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCCc-----------------cCCCCCCHHHHHHHHHHHHHHhhc----cHH
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------GSTFGGNPLASAVAIASLDVIRDE----KLA 183 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~aa~~al~~~~~~----~~~ 183 (306)
.+++|+++++. ++|++++++++++.+.+... ...++.+..++.++.++++.+.++ +..
T Consensus 202 ~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 280 (376)
T 3f0h_A 202 TGSQKVLACPP-GISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEV 280 (376)
T ss_dssp EETTTTTCCCS-SCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred ecCcccccCCC-ceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 67789999777 88999999998887754211 113344555556777788877654 234
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEeC
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTP 257 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~ 257 (306)
++.+++.+++++.|+++. ..... ...+.++.+. +. +.+..++.+.|.++ ||.+.++ ..+++|+++
T Consensus 281 ~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~~~~~~~-~~---~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~ 351 (376)
T 3f0h_A 281 ARIASQAADFRAKIKDLP-----FELVSESPANGVTSVH-PT---TANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH 351 (376)
T ss_dssp HHHHHHHHHHHHHTTTSS-----EEECCSSBBTTEEEEE-ES---SSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcC-----CccCccccCceEEEEe-CC---CCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence 445555555555554431 21111 1233333333 22 34678899999999 9999875 357899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 021893 258 PLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 258 ~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+..++++++++++++|+++++
T Consensus 352 ~~~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 352 IGALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp CSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 888999999999999999987
No 113
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=3.9e-23 Score=186.18 Aligned_cols=264 Identities=12% Similarity=0.009 Sum_probs=179.0
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCC----CCc-ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL----PGH-LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI 76 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~ 76 (306)
+.+||+++.+|||.....+...........+-+.. .++ ..+...|+++++++++++ ++++|+++++++++|.+
T Consensus 74 gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~G~~ 151 (379)
T 3ke3_A 74 DEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED--KSAIVYAPHVETSSGII 151 (379)
T ss_dssp TCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH--TCSEEEEESEETTTTEE
T ss_pred CCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhc--CCcEEEEEeecCCCcee
Confidence 57899999999997543332211000000000000 000 011246899999999753 57788898889999965
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCC-
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE- 155 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~- 155 (306)
. +.+++++|.++|++||+++|+|++++ | +..+....++.+..+.+++|+++++. ++|++++++++++.+.+..
T Consensus 152 ~-~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~~~~~d~~~~s~~K~l~~~~-g~g~~~~~~~~~~~l~~~~~ 225 (379)
T 3ke3_A 152 L-SEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMKELGIDVLISAPQKGWSSTP-CAGLVMLSAAAIKKVESTES 225 (379)
T ss_dssp C-CHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHHHHTCSEEEECTTTTTCSCC-CEEEEEECHHHHHHHHTCCC
T ss_pred C-CHHHHHHHHHHHHHcCCEEEEEeccc--C--CccccccccCCCEEEecchhhcCCCC-ceEEEEECHHHHHhhhcCCC
Confidence 4 68899999999999999999999986 2 33444455565555556779999877 8999999999887765411
Q ss_pred --c-----------------c--CCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Q 021893 156 --H-----------------G--STFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEV 211 (306)
Q Consensus 156 --~-----------------~--~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 211 (306)
. . ..++.+...++++.++++.+.++ ++.++.+++.+++++.|++++.. .....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~---~~~~~ 302 (379)
T 3ke3_A 226 NCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIE---SVAAE 302 (379)
T ss_dssp SCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC---BSBCT
T ss_pred CceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCE---ecCCc
Confidence 0 0 12366777888888999888654 56778888888898888886322 11111
Q ss_pred -EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 212 -RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 212 -~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
...+.+..+..+. .. ..+.+.|.++||.+.++. .+.+|++++..+|++||+.++++|+++++ ++
T Consensus 303 ~~~~~~i~~~~~~~----~~-~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~-~~ 376 (379)
T 3ke3_A 303 GFEAPGVVVSYTER----DD-MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALD-EV 376 (379)
T ss_dssp TCBCSSEEEEECSC----HH-HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHH-HH
T ss_pred cccCceEEEEccCC----cc-hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHH-Hh
Confidence 1122333333321 12 223778899999988763 67999999999999999999999999998 65
Q ss_pred C
Q 021893 282 P 282 (306)
Q Consensus 282 ~ 282 (306)
.
T Consensus 377 ~ 377 (379)
T 3ke3_A 377 L 377 (379)
T ss_dssp H
T ss_pred c
Confidence 3
No 114
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.89 E-value=5.9e-23 Score=183.54 Aligned_cols=198 Identities=17% Similarity=0.196 Sum_probs=149.0
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccce
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVS 139 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g 139 (306)
+++++++.++|++|.+.+ ++++.++|+++|+++|+||+|++|...+.....+..+....+.|+||.++ +|+ |+|
T Consensus 150 ~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G 224 (360)
T 3hdo_A 150 GKVFFLTTPNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGM-RIG 224 (360)
T ss_dssp SSEEEEESSCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTS-CCE
T ss_pred CCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCcc-cee
Confidence 457888888999999988 89999999999999999999997633222111233344455669999998 899 999
Q ss_pred eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893 140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218 (306)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~ 218 (306)
|+++++++++.+.... ..+..+++++.++.++++.... ++..++++++.+++++.|++.. .. ..+..|.++
T Consensus 225 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-----~~-~~~~~~~~~ 296 (360)
T 3hdo_A 225 LAIARPEVIAALDKIR--DHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIG-----YD-VIPSQGNYL 296 (360)
T ss_dssp EEECCHHHHHHHHHHS--CSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-----CE-ECCCSSSEE
T ss_pred eEeeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CE-EcCCCccEE
Confidence 9999999988876532 3467889999998888875221 3456666777777777776651 22 235567777
Q ss_pred EEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 219 AVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
++.++. .+..++.+.|.++||.+.++. ++++|++++ +++|+++++++|+++.+
T Consensus 297 ~~~~~~----~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 297 FATPPD----RDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp EEECTT----CCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred EEECCC----CCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 876552 467889999999999998854 489999954 89999999999988876
No 115
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=7e-22 Score=178.01 Aligned_cols=214 Identities=14% Similarity=0.118 Sum_probs=149.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--cccc---------ccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--RSGR---------MLA 114 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~~g~---------~~~ 114 (306)
|+++|+++++++ +++++++++++|++|.+.+ +++|.++|++||+++|+||+|+++. ..+. .+.
T Consensus 159 d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
T 3f9t_A 159 DEKFVKDAVEDY--DVDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFD 232 (397)
T ss_dssp CHHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCS
T ss_pred CHHHHHHHHhhc--CCeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccc
Confidence 899999999853 6788888888999998877 9999999999999999999998642 2222 222
Q ss_pred cccCCCCCcEEEecccccCCcccceeeEeCHH-HHhhcCC---CCcc--------CCCCCCHHHHHHHHHHHHHHhhccH
Q 021893 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKE-VMLCIQP---GEHG--------STFGGNPLASAVAIASLDVIRDEKL 182 (306)
Q Consensus 115 ~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~-~~~~~~~---~~~~--------~~~~~~~~~~~aa~~al~~~~~~~~ 182 (306)
... +....+.+++|.+++|. ++|+++++++ +.+.+.. .... .....+..++.++...+....-++.
T Consensus 233 ~~~-~~~~~~~s~~K~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 310 (397)
T 3f9t_A 233 FSL-GVDSITIDPHKMGHCPI-PSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKI 310 (397)
T ss_dssp GGG-TCSEEECCTTTTTCCCS-SCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-cCCeEEEccccccCCCC-CceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHH
Confidence 222 34444457779988888 9999888654 5444421 1111 1111133444444444432222446
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCC
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSI 261 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~ 261 (306)
.++.+++++++.+.|++.. + .......+.++++.++ ...++.+.|.++||.+.++. ++++|++++..+
T Consensus 311 ~~~~~~~~~~l~~~L~~~g--~---~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~ 379 (397)
T 3f9t_A 311 VNECMENTLYLYKKLKENN--F---KPVIEPILNIVAIEDE------DYKEVCKKLRDRGIYVSVCNCVKALRIVVMPHI 379 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTT--C---CBSSCCSSSEEEEECT------THHHHHHHHHHTTCBCEECSSSSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHCC--C---EEEcCCCccEEEEEeC------CHHHHHHHHHhCCeEEeccCCCCEEEEEEcCCC
Confidence 7777888888888888762 2 1111244556666544 26789999999999999875 589999999889
Q ss_pred CHHHHHHHHHHHHHHHh
Q 021893 262 SSNELQEGSKALHDVLE 278 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~ 278 (306)
+++++++++++|+++++
T Consensus 380 ~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 380 KREHIDNFIEILNSIKR 396 (397)
T ss_dssp CHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhhC
Confidence 99999999999998875
No 116
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.81 E-value=8.1e-25 Score=197.93 Aligned_cols=222 Identities=12% Similarity=0.105 Sum_probs=157.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----ccccc--CC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDW--EE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~~~--~~ 119 (306)
|++.|++.+++ ++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. +.+.. .+
T Consensus 152 d~~~l~~~l~~--~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 228 (392)
T 3b1d_A 152 DFEQLENDIVE--NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKD 228 (392)
Confidence 67888888874 357788888889999965 57889999999999999999999999987665532 11221 33
Q ss_pred CCCcEEEeccccc-CCcccceeeEeCH-HHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLADK-EVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
..+++.|+||.++ +|+ |+||+++++ ++++.+.......++ +.+++++.++.++++.... ++..++++++.+.+.
T Consensus 229 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 307 (392)
T 3b1d_A 229 FALVLSSATKTFNIAGT-KNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAV 307 (392)
Confidence 4566779999998 999 999999864 588888765444433 4577888888888764321 334555666666666
Q ss_pred HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893 195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~ 267 (306)
+.|++. +++.....+..+.++|+.++.. ..+..++++.|+ ++||.+.|+ +++++|+++ ..++++++
T Consensus 308 ~~l~~~---~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~e~i~ 380 (392)
T 3b1d_A 308 EYFAQE---APRLKVMKPQGTYLIWLDFSDY--GLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNI--AAPKSLVE 380 (392)
Confidence 666552 1112222334455556777631 135667899997 789999875 357899994 45688999
Q ss_pred HHHHHHHHHHh
Q 021893 268 EGSKALHDVLE 278 (306)
Q Consensus 268 ~~~~~l~~~l~ 278 (306)
+++++|+++++
T Consensus 381 ~~l~~l~~~l~ 391 (392)
T 3b1d_A 381 EICKRIVCCLP 391 (392)
Confidence 99999988775
No 117
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.89 E-value=6.9e-23 Score=186.32 Aligned_cols=255 Identities=11% Similarity=0.104 Sum_probs=170.1
Q ss_pred ceEEEEecCCCCcccchhcccCC-ccccccCCCCCC-CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
.+|++.+.+||+....+...... .... |..+ ... ..|+++|++.++++++++++++++.++|++|. +.+.
T Consensus 131 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~----~~~~~~~~---~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~-~~~~ 202 (412)
T 1ajs_A 131 TPVYVSSPTWENHNGVFTTAGFKDIRSY----RYWDTEKR---GLDLQGFLSDLENAPEFSIFVLHACAHNPTGT-DPTP 202 (412)
T ss_dssp SCEEEEESCCTHHHHHHHHTTCSCEEEE----ECEETTTT---EECHHHHHHHHHHSCTTCEEEEESSSCTTTCC-CCCH
T ss_pred CeEEEcCCCcHHHHHHHHHcCCceeEEE----eeecCCCC---ccCHHHHHHHHHhCCCCcEEEEECCCCCCCCC-CCCH
Confidence 57889999998865554433322 1110 1100 000 12799999999876557888888888999986 5689
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhhcccccc---cccccccC-CCC---CcEEEecccccC-CcccceeeEe---CHHH--
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQSGLARSG---RMLASDWE-EVR---PDMVILGKALGG-GVIPVSAVLA---DKEV-- 147 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g---~~~~~~~~-~~~---~d~~s~sK~~~~-G~~~~g~~~~---~~~~-- 147 (306)
+.+++|.++|++||+++|+||+|.++++.| ...++..+ ... ..+.|+||.+++ |+ |+||+++ ++++
T Consensus 203 ~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~ 281 (412)
T 1ajs_A 203 EQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNE-RVGNLTVVAKEPDSIL 281 (412)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CEEEEEEECSSHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCc-ceEEEEEecCCHHHHH
Confidence 999999999999999999999999887665 32222211 111 225699999996 99 9999998 8874
Q ss_pred --HhhcCCCCccCCCC-CCHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 148 --MLCIQPGEHGSTFG-GNPLASAVAIASLDVIR--------DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 148 --~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~--------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
++.+... ...++. .+++++.++.++++... .++..++++++++++.+.|+++.... ......+..|.
T Consensus 282 ~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~ 359 (412)
T 1ajs_A 282 RVLSQMQKI-VRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG-TWNHITDQIGM 359 (412)
T ss_dssp HHHHHHHHH-HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS-CCHHHHHCCSS
T ss_pred HHHHHHHHH-HhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CeeEEcCCCce
Confidence 3333321 223343 47888888888887542 14466777778888888887753000 01112234556
Q ss_pred EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++|+.++ ...+.+.+.++||.+.++ +|++++. .+++++++++++|+++++ ++
T Consensus 360 ~~~~~~~-------~~~~~~~l~~~gv~v~~~----~Ris~~~-~~~~~i~~~~~~l~~~l~-~~ 411 (412)
T 1ajs_A 360 FSFTGLN-------PKQVEYLINQKHIYLLPS----GRINMCG-LTTKNLDYVATSIHEAVT-KI 411 (412)
T ss_dssp EEECCCC-------HHHHHHHHHTTCEECCTT----SEEEGGG-CCTTTHHHHHHHHHHHHH-HC
T ss_pred EEEeCCC-------HHHHHHHHHhCCEEecCC----cEEEeee-CCHHHHHHHHHHHHHHHH-hc
Confidence 6554332 334455566889999875 6999763 489999999999999988 64
No 118
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.89 E-value=3e-22 Score=182.01 Aligned_cols=218 Identities=15% Similarity=0.089 Sum_probs=160.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|++++++. ++++|++++++|++|.+.+ +++|.++|++||+++|+|++|+. +. ..+.... ..+|++
T Consensus 124 d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-~~--~~~~~~~--~~~d~~ 192 (416)
T 3isl_A 124 DPEDIIREIKKV--KPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVATI-GG--CEVKVDE--WKIDAA 192 (416)
T ss_dssp CHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTTT-TT--SCCCTTT--TTCSEE
T ss_pred CHHHHHHHHhhC--CCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCccc-cC--CCcchhh--cCCCEE
Confidence 899999999852 5789999999999998887 99999999999999999999972 11 1122222 345665
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCC--------------------------------------ccCCCCCCHH
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGE--------------------------------------HGSTFGGNPL 165 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~ 165 (306)
+++|+++|+. ++|++++++++++.+.+.. .....+.+..
T Consensus 193 ~~s~~K~l~g~~-g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
T 3isl_A 193 IGGTQKCLSVPS-GMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATT 271 (416)
T ss_dssp ECCSSSTTCCCS-SEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHH
T ss_pred EecCccccCCCC-CeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHH
Confidence 5569988887 8999999999887765321 1112345677
Q ss_pred HHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893 166 ASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 166 ~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
++.++.++++.+... +..++++++++++.+.|++.... ..... ...+.++++.+++ ..+..++.+.|.++
T Consensus 272 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~ 345 (416)
T 3isl_A 272 MLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLR---LFGDDSCKMPVVTCVEIPG---GIDGESVRDMLLAQ 345 (416)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC---BCSCGGGBCTTEEEEECCT---TCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCE---eccCccccCCcEEEEeCCC---CCCHHHHHHHHHHh
Confidence 777777888776553 56778888888888888885211 11110 1235677777753 34678899999988
Q ss_pred -CceeccC----CCCEEEEeCCCCCCHHH-HHHHHHHHHHHHhhhcC
Q 021893 242 -GILAKPT----HDTIVRLTPPLSISSNE-LQEGSKALHDVLELDLP 282 (306)
Q Consensus 242 -Gi~~~~~----~~~~lRi~~~~~~t~~~-i~~~~~~l~~~l~~~~~ 282 (306)
||.+.++ .++++|++++...++++ +++++++|+++++ ++.
T Consensus 346 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~-~~~ 391 (416)
T 3isl_A 346 FGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLL-RHN 391 (416)
T ss_dssp HCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HTT
T ss_pred CCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHH-HcC
Confidence 9999864 46899999866666666 9999999999999 764
No 119
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.88 E-value=1.6e-22 Score=184.15 Aligned_cols=225 Identities=12% Similarity=0.097 Sum_probs=155.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc----cc-ccccCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR----ML-ASDWEEV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~----~~-~~~~~~~ 120 (306)
|+++|++.++ +++++++++.++|++|.+ .+++.+++|.++|++||++||+||+|+++.+.|. .+ +...+..
T Consensus 166 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 241 (416)
T 1bw0_A 166 DLDEIRRLKD---DKTKLLIVTNPSNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFET 241 (416)
T ss_dssp CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCC
T ss_pred CHHHHHHHhc---cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccC
Confidence 7999999887 457777777778889865 5799999999999999999999999998765554 22 2221111
Q ss_pred C---CcEEEeccccc-CCcccceeeEeCHH--HHhhcCCC---CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHH
Q 021893 121 R---PDMVILGKALG-GGVIPVSAVLADKE--VMLCIQPG---EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAH 188 (306)
Q Consensus 121 ~---~d~~s~sK~~~-~G~~~~g~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~ 188 (306)
. ..+.|+||.++ +|+ |+||++++++ +++.+... ....+++.+++++.++.++++.... ++..+++++
T Consensus 242 ~~~~i~~~s~sK~~~~~Gl-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 320 (416)
T 1bw0_A 242 TVPRVILGGTAKNLVVPGW-RLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEE 320 (416)
T ss_dssp SCCEEEEEESTTTTSCGGG-CCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred CCcEEEEecchhhCCCCCc-eEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 1 22448999987 799 9999998653 33332210 0113566788888888888874221 234556666
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCC
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSI 261 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~ 261 (306)
+++++.+.|+++ ++.....+..|.++++.++... ...+..++++.|+ ++||.+.++. ++++|+++ ..
T Consensus 321 ~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~--~~ 394 (416)
T 1bw0_A 321 SAMYLYNHIGEC----IGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT--TR 394 (416)
T ss_dssp HHHHHHHHHTTS----TTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--CS
T ss_pred HHHHHHHHHHhC----CCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--cC
Confidence 666666666543 2222222345778888776310 0135678888885 7899998752 67999996 47
Q ss_pred CHHHHHHHHHHHHHHHhhhcC
Q 021893 262 SSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++++++++++|.++++ +..
T Consensus 395 ~~e~l~~~l~~l~~~l~-~~~ 414 (416)
T 1bw0_A 395 PVEVYREAVERIKAFCQ-RHA 414 (416)
T ss_dssp CHHHHHHHHHHHHHHHH-HHB
T ss_pred CHHHHHHHHHHHHHHHH-Hhh
Confidence 89999999999999998 644
No 120
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.88 E-value=4.3e-23 Score=187.10 Aligned_cols=211 Identities=14% Similarity=0.113 Sum_probs=149.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCC----CCCcEEEeccccc-
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEE----VRPDMVILGKALG- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~----~~~d~~s~sK~~~- 132 (306)
+++++|++++++|++|.+ .+.+.+++|.++|+++|+++|+||+|+++++.+. ......++ ....+.|+||.++
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 240 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF 240 (400)
T ss_dssp CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTT
T ss_pred cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCC
Confidence 357788888889999965 5799999999999999999999999998765553 22222221 2234669999998
Q ss_pred CCcccceeeEeCHHH-------HhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Q 021893 133 GGVIPVSAVLADKEV-------MLCIQPGEHGSTF-GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF 204 (306)
Q Consensus 133 ~G~~~~g~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 204 (306)
+|+ |+||+++++++ ++.+.......++ +.+.+++.++.++++....++..++++++++++++.|++..
T Consensus 241 ~Gl-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g--- 316 (400)
T 3asa_A 241 AGI-RLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATG--- 316 (400)
T ss_dssp TTC-CCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred cch-heeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHCC---
Confidence 999 99999998887 4444321122233 56888888888888765335577888888888888888751
Q ss_pred CCceeeEEEeeeEEEEE-EecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 205 PNYVKEVRGRGLFNAVE-FDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 205 ~~~~~~~~~~g~~~~i~-~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.....+..|.++|+. ++. ..+..++++.|+++ ||.+.|+ +.+++|++ +..+++++++++++|+++
T Consensus 317 --~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~ 389 (400)
T 3asa_A 317 --FEVFGGEHAPYLWVKPTQA---NISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLGKREDILAACERLQMA 389 (400)
T ss_dssp --CEEEECSSSSEEEEECCCT---TCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCSCHHHHHHHHHHHHC-
T ss_pred --CeeeCCCCceEEEEeccCC---CCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeCCHHHHHHHHHHHHHH
Confidence 222222357788888 653 23345688888755 9999875 25789999 578999999999999998
Q ss_pred HhhhcC
Q 021893 277 LELDLP 282 (306)
Q Consensus 277 l~~~~~ 282 (306)
++ +..
T Consensus 390 ~~-~~~ 394 (400)
T 3asa_A 390 PA-LQS 394 (400)
T ss_dssp ------
T ss_pred HH-hhh
Confidence 88 554
No 121
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.88 E-value=4e-21 Score=174.68 Aligned_cols=216 Identities=17% Similarity=0.199 Sum_probs=155.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+.. .. .+....++ +|+
T Consensus 157 ~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~--~~~~~~~~--~di 224 (420)
T 1t3i_A 157 FDLEHFKTLLS---EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQSAP-HY--PLDVQLID--CDW 224 (420)
T ss_dssp BCHHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTTTT-TS--CCCHHHHT--CSE
T ss_pred cCHHHHHHhhC---CCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhccC-Cc--cCchhhcC--CCE
Confidence 48999999987 47899999999999999887 999999999999999999999832 11 11222223 565
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhcCCCCccC--------------------CCCCCHHHHHHHH-HHHHHHhh--
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--------------------TFGGNPLASAVAI-ASLDVIRD-- 179 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~aa~-~al~~~~~-- 179 (306)
+ |+||.++ +. ++|++++++++++.+.+..... ....+.+.+.++. ++++.+.+
T Consensus 225 ~~~s~sK~~~-~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 302 (420)
T 1t3i_A 225 LVASGHKMCA-PT-GIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLG 302 (420)
T ss_dssp EEEEGGGTTS-CT-TCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEehhhhcC-CC-ceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhH
Confidence 5 6669554 44 5899999999998887653321 1223445444444 46777654
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-----EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----- 248 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----- 248 (306)
+++.++.+++.+++.+.|+++ ++.....+ ..+.++.+.++. .+..++.+.|.++||.+.++
T Consensus 303 ~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~~~~~ 374 (420)
T 1t3i_A 303 MENIHNYEVELTHYLWQGLGQI----PQLRLYGPNPKHGDRAALASFNVAG----LHASDVATMVDQDGIAIRSGHHCTQ 374 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC----TTEEEESCCGGGSCBCSEEEEEETT----BCHHHHHHHHHTTTEECBCSCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCccccccCCEEEEEECC----CCHHHHHHHHHHCCeEEeeccccch
Confidence 345677777777777777664 11221112 136777777652 35678899999999999986
Q ss_pred ------C-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 249 ------H-DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 249 ------~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+ .+++|++++..+++++++.++++|+++++ .+.+
T Consensus 375 ~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~-~~~~ 415 (420)
T 1t3i_A 375 PLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR-FFSD 415 (420)
T ss_dssp HHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH-HTC-
T ss_pred HHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH-HhcC
Confidence 2 67999999888899999999999999998 7754
No 122
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.88 E-value=1.1e-22 Score=185.05 Aligned_cols=260 Identities=13% Similarity=0.115 Sum_probs=172.6
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhc--CCcEEEE
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKES--GDQIAGF 64 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~--~~~~~~v 64 (306)
.|+++.|+.++...++.++..+.+..-...|.++. ++.+|. .|++.|++.++++ +....++
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v 182 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIAS 182 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEE
T ss_pred cEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEE
Confidence 67777777777666665555433222222233332 233332 2799999999852 1234477
Q ss_pred EEccc-cCCCCcccCChhHHHHHHHHHH------HcCCEEEEehhhhcccccccc---cccccCCCCCc---E--EEecc
Q 021893 65 LFEPI-QGEAGVIIPPDGYLKAVRDLCS------KYNILMIADEIQSGLARSGRM---LASDWEEVRPD---M--VILGK 129 (306)
Q Consensus 65 ~v~~~-~~~~G~~~~~~~~l~~i~~l~~------~~gi~li~De~~~g~~~~g~~---~~~~~~~~~~d---~--~s~sK 129 (306)
+++++ +|++|.+ .+.+.+++|+++|+ +||++||+||+|.++++.|.. +.....++..+ + .|+||
T Consensus 183 i~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 261 (413)
T 3t18_A 183 LINSPGNNPTGYS-LSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSK 261 (413)
T ss_dssp EEECSSCTTTCCC-CCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHH
T ss_pred EEeCCCCCCCCCC-CCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCc
Confidence 77766 8999965 57888999999999 899999999999988777642 11222334444 2 38999
Q ss_pred ccc-CCcccceeeEe---CHHHHhhcCCCCcc---CC-CCCCHHHHHHHHHHHHHHh-----h--ccHHHHHHHHHHHHH
Q 021893 130 ALG-GGVIPVSAVLA---DKEVMLCIQPGEHG---ST-FGGNPLASAVAIASLDVIR-----D--EKLAERSAHLGEELR 194 (306)
Q Consensus 130 ~~~-~G~~~~g~~~~---~~~~~~~~~~~~~~---~~-~~~~~~~~~aa~~al~~~~-----~--~~~~~~~~~~~~~l~ 194 (306)
.++ +|+ |+||+++ ++++++.+...... .+ ...+.+++.++.++++... . +++.++++++.+.+.
T Consensus 262 ~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 340 (413)
T 3t18_A 262 SHTAYGL-RSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFV 340 (413)
T ss_dssp HTTCGGG-CCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCc-CcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 899 9999998 89988877643211 12 2457777777776665421 1 234566677777777
Q ss_pred HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
+.|++.+ .....+..+.++|+.+. +..++++.|.++||.+.|+ ++++|++++.. +++++ +++|.
T Consensus 341 ~~l~~~g-----~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gv~v~~g-~~~iRis~~~~-~~~~~---l~~l~ 404 (413)
T 3t18_A 341 TAAKENK-----LTMIPYFGGFFTFIPTD------KAFDIVKDLEKENIFTIPS-AKGIRVAICGV-GEEKI---PKLVQ 404 (413)
T ss_dssp HHHHHTT-----CCCBCCCSSSCEEEECS------CHHHHHHHHHHTTEECEEC-SSEEEECTTTS-CGGGH---HHHHH
T ss_pred HHHHHcC-----CCccCCCceEEEEeCCC------CHHHHHHHHHhCCEEEecC-CCceEEEEeeC-CHHHH---HHHHH
Confidence 7777652 22233445566666442 4678889999999999997 77999997643 45555 78888
Q ss_pred HHHhhhcC
Q 021893 275 DVLELDLP 282 (306)
Q Consensus 275 ~~l~~~~~ 282 (306)
++++ ++.
T Consensus 405 ~~l~-~~~ 411 (413)
T 3t18_A 405 RLAF-YTN 411 (413)
T ss_dssp HHHH-HHH
T ss_pred HHHH-HHh
Confidence 8877 653
No 123
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.88 E-value=1.4e-21 Score=176.48 Aligned_cols=215 Identities=15% Similarity=0.132 Sum_probs=160.3
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. .+ +.....+|+
T Consensus 146 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~--~~--~~~~~~~di 214 (393)
T 1vjo_A 146 FSLEELRTALETH--RPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGV--PI--FLDAWGVDL 214 (393)
T ss_dssp CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTS--CC--CTTTTTCSE
T ss_pred CCHHHHHHHHhhC--CceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCc--CC--cccccCccE
Confidence 5899999999853 5778999999999998887 9999999999999999999998 4322 22 222345676
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhcCCC-------Cc------------cCCC-CCCHHHHHHHHHHHHHHhh---
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPG-------EH------------GSTF-GGNPLASAVAIASLDVIRD--- 179 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~-------~~------------~~~~-~~~~~~~~aa~~al~~~~~--- 179 (306)
+ |++|+++++. ++|++++++++++.+... .. ...+ +.+.+.+.++.++++.+.+
T Consensus 215 ~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~ 293 (393)
T 1vjo_A 215 AYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGL 293 (393)
T ss_dssp EECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred EEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccH
Confidence 6 4559999887 999999999988876321 00 1233 5688888888899988644
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE--eeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCE
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG--RGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTI 252 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~ 252 (306)
++..++++++++++.+.|+++. +. .. ...+ .+.++++.++. +.+..++++.|.++ ||.+.++ .+++
T Consensus 294 ~~~~~~~~~~~~~l~~~L~~~g--~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 366 (393)
T 1vjo_A 294 ANCWQRHQKNVEYLWERLEDIG--LS-LH-VEKEYRLPTLTTVCIPD---GVDGKAVARRLLNEHNIEVGGGLGELAGKV 366 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--CC-BS-SCGGGBCSSEEEEECCT---TCCHHHHHHHHHHHHCEECEECCGGGTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHcC--Cc-cc-CCccccCCcEEEEEcCC---CCCHHHHHHHHHhhCCEEEecCccccCCCE
Confidence 3567888888899998888762 21 11 1111 23556666653 34577899999998 9999875 3689
Q ss_pred EEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893 253 VRLTP-PLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 253 lRi~~-~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+|+++ +...+++++++++++|+++++
T Consensus 367 iRis~~~~~~~~~~i~~~~~~l~~~l~ 393 (393)
T 1vjo_A 367 WRVGLMGFNSRKESVDQLIPALEQVLR 393 (393)
T ss_dssp EEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred EEEeCCccCChHHHHHHHHHHHHHHhC
Confidence 99995 455678889999999998763
No 124
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.88 E-value=5.9e-23 Score=185.62 Aligned_cols=248 Identities=12% Similarity=0.066 Sum_probs=162.7
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC---C----CHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF---G----DITALEKIFKESGDQIAGFLFEPIQGEAG 74 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----d~~~le~~i~~~~~~~~~v~v~~~~~~~G 74 (306)
+.+|++...+||+....+...... +..+|. + |++.|++.++++++++++++++.++|++|
T Consensus 120 gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG 186 (396)
T 2q7w_A 120 VKRVWVSNPSWPNHKSVFNSAGLE-------------VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186 (396)
T ss_dssp CCEEEEEESCCTHHHHHHHHTTCE-------------EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTC
T ss_pred CCEEEEcCCCchhHHHHHHHcCCc-------------eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCC
Confidence 356788888887765444332221 122222 2 79999999986544588888899999999
Q ss_pred cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--cccccccC----CCCCcEEEeccccc-CCcccceeeEe---C
Q 021893 75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASDWE----EVRPDMVILGKALG-GGVIPVSAVLA---D 144 (306)
Q Consensus 75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~---~ 144 (306)
. +.+.+.+++|.++|++||+++|+||+|+++++.+ ...++..+ .....+.|+||.++ +|+ |+||+++ +
T Consensus 187 ~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~ 264 (396)
T 2q7w_A 187 I-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAAD 264 (396)
T ss_dssp C-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSS
T ss_pred C-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCC
Confidence 6 4679999999999999999999999999876543 22222211 11122558999999 899 9999986 5
Q ss_pred H----HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH------h--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893 145 K----EVMLCIQPGEHGSTFGGNPLASAVAIASLDVI------R--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR 212 (306)
Q Consensus 145 ~----~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~------~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 212 (306)
+ ++++.+...........+++++.++.++++.. . .++..++++++++.+.+.|++..... ++....+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~ 343 (396)
T 2q7w_A 265 SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANR-DFSFIIK 343 (396)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCS-CCTHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcceecC
Confidence 5 35444432111222234788888888777543 1 12345566777777777777653110 0111223
Q ss_pred EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 213 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 213 ~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
..|.++|+.++ ...+.+.|.++||.+.++ +|++++. .+++++++++++|++++
T Consensus 344 ~~~~~~~~~~~-------~~~~~~~l~~~gv~v~~~----~Ris~~~-~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 344 QNGMFSFSGLT-------KEQVLRLREEFGVYAVAS----GRVNVAG-MTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp CCSSEEECCCC-------HHHHHHHHHHHCEECCTT----CEEEGGG-CCTTTHHHHHHHHHHHC
T ss_pred CCceEEEecCC-------HHHHHHHHHhcCeeecCC----ceEEEee-cCHHHHHHHHHHHHhcC
Confidence 45666665432 245666677889999874 7999764 38999999999998763
No 125
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.88 E-value=2e-21 Score=175.29 Aligned_cols=220 Identities=15% Similarity=0.107 Sum_probs=160.8
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.+++. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. .+....+ .+|+
T Consensus 120 ~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~--~~~~~~~--~~d~ 189 (392)
T 2z9v_A 120 IDPQAVADMLKAH-PEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGM--KTHPEDC--KADI 189 (392)
T ss_dssp CCHHHHHHHHHHC-TTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTB--SCCGGGG--TCSE
T ss_pred CCHHHHHHHHhcC-CCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCc--ccccccc--cceE
Confidence 4899999999753 46889999999999998887 9999999999999999999997 2211 1222222 3455
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhcCCCC--------------------ccCCCCCCHHHHHHHHHHHHHHhhc--
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--------------------HGSTFGGNPLASAVAIASLDVIRDE-- 180 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~aa~~al~~~~~~-- 180 (306)
+ |++|+++++. ++|++++++++++.+++.. .....+.+..++.++.++++.+.+.
T Consensus 190 ~~~s~sK~~~~~~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~ 268 (392)
T 2z9v_A 190 YVTGPNKCLGAPP-GLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGP 268 (392)
T ss_dssp EEECSSSTTCCCS-CCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred EEecCcccccCCC-ceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 4 6679988777 8899999999887664311 1112345666777777788776543
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE--EEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCE
Q 021893 181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTI 252 (306)
Q Consensus 181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~ 252 (306)
+..++++++++++++.|+++ .+. ..... ...+.++++.++. +.+..++.+.|.++ ||.+.++ ..++
T Consensus 269 ~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~ 342 (392)
T 2z9v_A 269 EAVWARHALTAKAMRAGVTAM--GLS-VWAASDSIASPTTTAVRTPD---GVDEKALRQAARARYGVVFSSGRGETLGKL 342 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TCC-BSSSSGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCEECEECCGGGTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHc--CCe-eccCCccccCCceEEEECCC---CCCHHHHHHHHHhcCCEEEecCCCCCCCCe
Confidence 46778888888888888875 221 11101 1246667777653 34577899999998 9999875 3689
Q ss_pred EEEeCCC-CCCHHHHHHHHHHHHHHHhhhcC
Q 021893 253 VRLTPPL-SISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 253 lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+|+++.. .++++++++++++|+++++ ++.
T Consensus 343 lRi~~~~~~~~~~~i~~~~~~l~~~~~-~~~ 372 (392)
T 2z9v_A 343 TRIGHMGPTAQPIYAIAALTALGGAMN-AAG 372 (392)
T ss_dssp EEEECCGGGCSHHHHHHHHHHHHHHHH-HTT
T ss_pred EEEeCcccccCHHHHHHHHHHHHHHHH-HcC
Confidence 9999644 7899999999999999998 764
No 126
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.87 E-value=2.6e-21 Score=175.95 Aligned_cols=248 Identities=16% Similarity=0.139 Sum_probs=174.2
Q ss_pred ceEEEEecCCCCcccchhc-ccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 3 AIIVSCCGCFHGRTLAAIS-MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
.+||++...+|+.+..+.. +.... ..+ ..+..+|. +++|+++|+ +++++|++++++|++|.+.+
T Consensus 119 d~vii~~~~~~~~~~~~~~~~~~~~--~~g-----~~~~~v~~--~~~l~~~i~---~~~~~v~~~~~~nptG~~~~--- 183 (416)
T 1qz9_A 119 RRVIVTETSNFPTDLYIAEGLADML--QQG-----YTLRLVDS--PEELPQAID---QDTAVVMLTHVNYKTGYMHD--- 183 (416)
T ss_dssp CCEEEEETTSCHHHHHHHHHHHHHH--CSS-----CEEEEESS--GGGHHHHCS---TTEEEEEEESBCTTTCBBCC---
T ss_pred CcEEEEcCCCCCchHHHHHHHHHHh--cCC-----ceEEEeCc--HHHHHHHhC---CCceEEEEeccccCcccccC---
Confidence 3577777777775443221 11000 000 01234444 788888886 47899999999999999887
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccc-eeeEeCHHHHhhcCCCCcc-
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV-SAVLADKEVMLCIQPGEHG- 157 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~-g~~~~~~~~~~~~~~~~~~- 157 (306)
+++|.++|++||+++|+||+|+ ++... +....+ .+|++ |++|.+++|. ++ |++++++++++.+.+....
T Consensus 184 -l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~~~~s~~K~l~~g~-~~~g~l~~~~~~~~~l~~~~~g~ 256 (416)
T 1qz9_A 184 -MQALTALSHECGALAIWDLAHS-AGAVP--VDLHQA--GADYAIGCTYKYLNGGP-GSQAFVWVSPQLCDLVPQPLSGW 256 (416)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEEECSSSTTCCCT-TCCCEEEECTTTTTTSCCSCCCG
T ss_pred -HHHHHHHHHHcCCEEEEEcccc-ccCcC--CChhhc--CCCEEEecCcccCCCCC-CCeEEEEECHHHHhccCCCcccc
Confidence 9999999999999999999997 22221 112222 35666 4569998888 88 9999999987777653211
Q ss_pred ----------------------CCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh--hCCCceee
Q 021893 158 ----------------------STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQ--QFPNYVKE 210 (306)
Q Consensus 158 ----------------------~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~ 210 (306)
...+.+..+++++.++++.+.+ +++.++++++++++.+.|++... .+ .+..
T Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~~~~ 334 (416)
T 1qz9_A 257 FGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHEL--TLVT 334 (416)
T ss_dssp GGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCC--EECS
T ss_pred CccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCe--EEeC
Confidence 1224577788888888888764 34678888889999999887632 11 1111
Q ss_pred EE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893 211 VR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPP-LSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 211 ~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.. ..+.++++.++ +..++.+.|.++||.+.....+++|++++ ..++++++++++++|+++++ +.
T Consensus 335 ~~~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~-~~ 402 (416)
T 1qz9_A 335 PREHAKRGSHVSFEHP------EGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILD-RK 402 (416)
T ss_dssp CSSGGGBCSEEEEECT------THHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH-HT
T ss_pred CCCHHHcCCEEEEecC------CHHHHHHHHHhCCcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHh-cc
Confidence 11 13566777654 25689999999999987766889999987 58899999999999999998 64
No 127
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.87 E-value=1e-21 Score=174.29 Aligned_cols=215 Identities=17% Similarity=0.107 Sum_probs=159.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|++.|++.++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++... +....+ .+|+
T Consensus 111 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~ 179 (353)
T 2yrr_A 111 VDPEAVARALKRR--RYRMVALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVTT-LGMLP--FSMRAM--GVDY 179 (353)
T ss_dssp CCHHHHHHHHHHS--CCSEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSE
T ss_pred CCHHHHHHHHHhC--CCCEEEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCcc-ccccc--cccccc--CceE
Confidence 4899999999853 5788999999999999887 9999999999999999999995 43221 222222 3465
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhcCC--C-------------CccCCCCCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCIQP--G-------------EHGSTFGGNPLASAVAIASLDVIRDE---KLAE 184 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~ 184 (306)
+ +++|+++++. ++|++++++++++.+.. . .....++.+...+.++.++++.+.++ +..+
T Consensus 180 ~~~s~~K~~~~~~-g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 258 (353)
T 2yrr_A 180 AFTGSQKCLSAPP-GLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARER 258 (353)
T ss_dssp EECCTTSTTCCCS-SCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred EEecCcccccCCC-ceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 5 5569988777 78999999999887752 0 11223355777777777888876543 4577
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCC
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPL 259 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~ 259 (306)
+++++++++++.|+++ .+ .+.... ..+.++++.++. +.+..++.+.|.++||.+.++ .++++|++++.
T Consensus 259 ~~~~~~~~l~~~L~~~--g~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~ 331 (353)
T 2yrr_A 259 RAREVYAWVLEELKAR--GF--RPYPKASPLPTVLVVRPPE---GVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMG 331 (353)
T ss_dssp HHHHHHHHHHHHHHHT--TC--EESCSSSBCTTEEEEECCT---TCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSG
T ss_pred HHHHHHHHHHHHHHHC--CC--ccccCccCCCeEEEEECCC---CCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCc
Confidence 7888888888888775 22 111111 145566777653 345778999999999999875 36789999877
Q ss_pred CCCHHHHH-HHHHHHHHHHh
Q 021893 260 SISSNELQ-EGSKALHDVLE 278 (306)
Q Consensus 260 ~~t~~~i~-~~~~~l~~~l~ 278 (306)
..++++++ +++++|+++++
T Consensus 332 ~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 332 EGARREAYQAFLKALDRALA 351 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 78899999 99999999876
No 128
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.87 E-value=2.1e-22 Score=181.94 Aligned_cols=246 Identities=13% Similarity=0.070 Sum_probs=165.4
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-------CCHHHHHHHHHhcCCcEEEEEEccccCCCCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------GDITALEKIFKESGDQIAGFLFEPIQGEAGV 75 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~ 75 (306)
.+|++...+||+....+....... ..+|. .|++.|++.+++++++++++++++++|++|.
T Consensus 118 d~vl~~~p~~~~~~~~~~~~g~~~-------------~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~ 184 (394)
T 2ay1_A 118 LRVFVSDPTWPNHVSIMNFMGLPV-------------QTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA 184 (394)
T ss_dssp CCEEEEESCCHHHHHHHHHHTCCE-------------EEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred CEEEEcCCCChhHHHHHHHcCCce-------------EEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 567888888877654443332211 12222 2799999999865445788888999999996
Q ss_pred ccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--cccccccC-CCCCc---EEEeccccc-CCcccceeeEe---CH
Q 021893 76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASDWE-EVRPD---MVILGKALG-GGVIPVSAVLA---DK 145 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~~~~-~~~~d---~~s~sK~~~-~G~~~~g~~~~---~~ 145 (306)
+.+.+.+++|.++|++||+++|+||+|+++++.+ ...++..+ ...++ +.|+||.++ +|+ |+||+++ ++
T Consensus 185 -~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~ 262 (394)
T 2ay1_A 185 -NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRE-RTGCLLALCADA 262 (394)
T ss_dssp -CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGG-CEEEEEEECSSH
T ss_pred -CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCC-ccceEEEEeCCH
Confidence 4679999999999999999999999999876543 11112211 11223 448999999 899 9999988 66
Q ss_pred HHHhhcCCC---CccCCC-CCCHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893 146 EVMLCIQPG---EHGSTF-GGNPLASAVAIASLDVI--------RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213 (306)
Q Consensus 146 ~~~~~~~~~---~~~~~~-~~~~~~~~aa~~al~~~--------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 213 (306)
++++.+... ....++ ..+++++.++.++++.. ..++..++++++++++.+.|++..... ++....+.
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~ 341 (394)
T 2ay1_A 263 ATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSD-RFGFVAEH 341 (394)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTTHHHHC
T ss_pred HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CeeEEcCC
Confidence 554332210 011233 34778888888777643 124466777888888888888765210 01112234
Q ss_pred eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.|.++|+.++ ...+.+.|.++||.+.++ +|++++ .++++++++++++|+++
T Consensus 342 ~g~~~~~~~~-------~~~~~~~l~~~gi~v~~~----~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 342 RGMFSRLGAT-------PEQVKRIKEEFGIYMVGD----SRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp CSSEEECCCC-------HHHHHHHHHHHCEECCTT----CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred ceEEEeeCCC-------HHHHHHHHHhCCEEecCC----CeEEee-cCCHhhHHHHHHHHHHc
Confidence 5677666443 245677777899999875 699976 46899999999999875
No 129
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.87 E-value=8.2e-22 Score=185.09 Aligned_cols=224 Identities=11% Similarity=0.119 Sum_probs=150.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH-HcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS-KYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~-~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|+++++ +++++|+++.++|++|.+ .+.+.+++|.++|+ +||+++|+||+|+++...+..+.....+....+
T Consensus 233 d~~~l~~~l~---~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~ 308 (533)
T 3f6t_A 233 EPNEIEKLKD---PSIKALIVVNPTNPTSKE-FDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLV 308 (533)
T ss_dssp CHHHHHHHSC---TTEEEEEEESSCTTTCBC-CCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEE
T ss_pred CHHHHHHHhC---CCCeEEEEeCCCCCCccc-cCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEE
Confidence 7899999886 578999988889999965 57888999999999 699999999999987543332211112334556
Q ss_pred EEeccccc-CCcccceeeEeCHH-----HHhhc--------------------------------CCCCccCCCCCCHHH
Q 021893 125 VILGKALG-GGVIPVSAVLADKE-----VMLCI--------------------------------QPGEHGSTFGGNPLA 166 (306)
Q Consensus 125 ~s~sK~~~-~G~~~~g~~~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~ 166 (306)
.|+||.+| +|+ |+||++++++ +++.+ .......+.+.+.+.
T Consensus 309 ~S~SK~~g~~G~-RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~ 387 (533)
T 3f6t_A 309 YSYSKLFGCTGW-RLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQ 387 (533)
T ss_dssp EESHHHHTCGGG-CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHH
T ss_pred ecCcccCCCccc-ceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHH
Confidence 79999998 899 9999999776 54433 333344455566666
Q ss_pred HHHHH-HHHHHHh-------h----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----C---
Q 021893 167 SAVAI-ASLDVIR-------D----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----L--- 227 (306)
Q Consensus 167 ~~aa~-~al~~~~-------~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----~--- 227 (306)
+.++. .++..+. . ++..++++++.+.+.+.|. . ++....+..|.++|+.++... .
T Consensus 388 q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-----~-~~~~~~~~~g~~~~~~l~~~~~~~~g~~~ 461 (533)
T 3f6t_A 388 QIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-----A-PKDETDTNTHYYSLIDIYRLAEKIYGKEF 461 (533)
T ss_dssp HHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-----C-CCCCSTTBCCSEEEEEHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-----C-CccccCCCceEEEEEehHhhhhhccchHH
Confidence 66521 1233332 1 2234445555555555553 2 233344567777887765200 0
Q ss_pred ------hhhHHHHHHHHH-HCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 228 ------PVSAYDICLKMK-ERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 228 ------~~~~~~~~~~l~-~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
..+..+++..++ ++||.+.|+ +.+++|+++. ..+++++++++++|+++++ ++.
T Consensus 462 ~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~l~-~~~ 526 (533)
T 3f6t_A 462 RDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLELLK-EYY 526 (533)
T ss_dssp HHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHHHH-HHH
Confidence 013446666665 679999985 2689999963 3689999999999999998 754
No 130
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.87 E-value=1.7e-20 Score=170.07 Aligned_cols=209 Identities=16% Similarity=0.105 Sum_probs=148.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|++.++ +++++|++++++|++|.+.+ +++|.++|+++|+++|+||+|+. +.. .+....++.+..+.
T Consensus 154 d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-g~~--~~~~~~~~~d~~~~ 223 (406)
T 3cai_A 154 PTWQWESLIS---KSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAAA-PYR--LLDIRETDADVVTV 223 (406)
T ss_dssp CGGGHHHHCC---TTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTTT-TTC--CCCHHHHCCSEEEE
T ss_pred CHHHHHHHhC---CCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEccccc-CCC--CCCchhcCCCEEEe
Confidence 7899999887 57999999999999999888 99999999999999999999972 111 12222233322334
Q ss_pred EecccccCCcccce-eeEeCHHHHhhcCCCCc---------cCCCCCCHHHHHHHHHHHHHHhh----------------
Q 021893 126 ILGKALGGGVIPVS-AVLADKEVMLCIQPGEH---------GSTFGGNPLASAVAIASLDVIRD---------------- 179 (306)
Q Consensus 126 s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~al~~~~~---------------- 179 (306)
|++|.++ . ++| ++++++++++.+.+... ....+.+..+++++.++++.+..
T Consensus 224 s~~K~~g--~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 300 (406)
T 3cai_A 224 NAHAWGG--P-PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVS 300 (406)
T ss_dssp EGGGGTS--C-SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHH
T ss_pred ehhhhcC--C-CcCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhh
Confidence 6789765 3 478 89999999888876432 11334577777777778877654
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------- 249 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------- 249 (306)
+++.++++++++++.+.|+++ ++.....+ ..+.++++.++. .+..++.+.|.++||.+.++.
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gi~v~~g~~~~~~~~ 372 (406)
T 3cai_A 301 MQSADAYLNRVFDYLMVSLRSL----PLVMLIGRPEAQIPVVSFAVHK----VPADRVVQRLADNGILAIANTGSRVLDV 372 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC----TTEEECCCCSSBCSEEEEEETT----BCHHHHHHHHHHTTEECEECCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCeEEcCCccccCCEEEEEECC----cCHHHHHHHHHHCCcEEecCChHHHHHH
Confidence 234455566666666666553 22211111 124466776652 456789999999999998753
Q ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 250 ------DTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 250 ------~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.+++|++++..++++++++++++|++
T Consensus 373 ~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 373 LGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp HTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 37899999988899999999998875
No 131
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.86 E-value=8.1e-22 Score=179.30 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=152.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc---ccccc---ccCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG---RMLAS---DWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g---~~~~~---~~~~ 119 (306)
|++.|++.++++++.+++++++.++|++|. +.+.+.+++|.++|++||+++|+||+|.++.+.+ ...+. ...+
T Consensus 162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T 1yaa_A 162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp CHHHHHHHHHHSCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC
Confidence 799999999875334677777889999995 4578999999999999999999999999875543 21112 1111
Q ss_pred ----CCCcEEEecccccC-CcccceeeE--e-----CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-----
Q 021893 120 ----VRPDMVILGKALGG-GVIPVSAVL--A-----DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR----- 178 (306)
Q Consensus 120 ----~~~d~~s~sK~~~~-G~~~~g~~~--~-----~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~----- 178 (306)
....+.|+||.+++ |+ |+||++ + +++ +++.+...........+.+++.++.++++...
T Consensus 241 ~~~~~~i~~~s~sK~~~~~Gl-riG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 319 (412)
T 1yaa_A 241 STVSPVFVCQSFAKNAGMYGE-RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQW 319 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGG-CEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHH
T ss_pred CCCcceEEEeccCCCCCCcCC-cceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHH
Confidence 12234589999996 99 999998 7 565 66666542223333457888888888887542
Q ss_pred ---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEE
Q 021893 179 ---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRL 255 (306)
Q Consensus 179 ---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi 255 (306)
.++..++++++++++.+.|++..... ++....+..|.++|+.++ ...+.+.+.++||.+.+ ++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~----~~Ri 387 (412)
T 1yaa_A 320 HKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVNQCGMFSFTGLT-------PQMVKRLEETHAVYLVA----SGRA 387 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCTHHHHCCSSEEECCCC-------HHHHHHHHHHHCEECCT----TSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CeeeeccCceEEEeeCCC-------HHHHHHHHHhCCEEecc----CcEE
Confidence 23456777788888888887764110 011122344555554322 34555555578999987 4899
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 256 TPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 256 ~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
+++. .+++++++++++|+++++ .+
T Consensus 388 s~~~-~~~~~i~~~~~~l~~~~~-~~ 411 (412)
T 1yaa_A 388 SIAG-LNQGNVEYVAKAIDEVVR-FY 411 (412)
T ss_dssp EGGG-CCTTTHHHHHHHHHHHHH-HC
T ss_pred EEcc-CCHhHHHHHHHHHHHHHH-hh
Confidence 9763 589999999999999887 53
No 132
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.86 E-value=4.7e-21 Score=172.88 Aligned_cols=220 Identities=11% Similarity=0.089 Sum_probs=158.6
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
..|+++|++.++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. .+.... ..+|
T Consensus 130 ~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d 198 (393)
T 2huf_A 130 SLSLDEIRDALLIH--KPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGA--PMFMDR--WEID 198 (393)
T ss_dssp CCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTTT--TTCS
T ss_pred CCCHHHHHHHHhcc--CCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCC--Ccchhh--cCcc
Confidence 35899999999842 5788999999999998887 9999999999999999999986 3221 122222 3456
Q ss_pred EE--EecccccCCcccceeeEeCHHHHhhcCCCC----c------------------c-CCCCCCHHHHHHHHHHHHHHh
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE----H------------------G-STFGGNPLASAVAIASLDVIR 178 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~----~------------------~-~~~~~~~~~~~aa~~al~~~~ 178 (306)
++ +++|+++|+. ++|++++++++++.+.... . . ...+.+..+++++.++++.+.
T Consensus 199 ~~~~s~sK~l~g~~-G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 277 (393)
T 2huf_A 199 AMYTGSQKVLGAPP-GITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMAC 277 (393)
T ss_dssp EEECCSSSTTCCCS-SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCcccccCC-CeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 66 5569988766 7799999999888765420 0 0 112346667777777888764
Q ss_pred h---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----
Q 021893 179 D---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT---- 248 (306)
Q Consensus 179 ~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~---- 248 (306)
+ ++..++++++++++++.|++++ +. .. ... ..+.++++.++. +.+..++.+.|+++ ||.+.++
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gi~v~~g~~~~ 350 (393)
T 2huf_A 278 EEGLPALIARHEDCAKRLYRGLQDAG--FE-LY-ADPKDRLSTVTTIKVPQ---GVDWLKAAQYAMKTYLVEISGGLGPT 350 (393)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHTT--CC-BS-SCGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCEECBCCCGGG
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcC--Ce-ec-cCccccCCcEEEEEcCC---CCCHHHHHHHHHHhCCEEEecCcccc
Confidence 4 3467788888888888888762 21 11 111 134466776653 34577899999875 9999875
Q ss_pred CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 249 HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 249 ~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
..+++|+++ +..++++++++++++|+++++ ++..
T Consensus 351 ~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~-~~~~ 385 (393)
T 2huf_A 351 AGQVFRIGLMGQNATTERVDRVLQVFQEAVA-AVKP 385 (393)
T ss_dssp TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HHCC
T ss_pred cCCEEEEEcccCcCCHHHHHHHHHHHHHHHH-HcCC
Confidence 367999998 445689999999999999998 7654
No 133
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=6.5e-21 Score=172.02 Aligned_cols=246 Identities=14% Similarity=0.111 Sum_probs=161.1
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+.+........ .....+..++.+|++.|++.++ +++++|++++++|++|.+.+
T Consensus 92 ~~vl~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---- 155 (386)
T 1cs1_A 92 DLLVAPHDCYGGSYRLFDSLAK---------RGCYRVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD---- 155 (386)
T ss_dssp CEEEEETTCCHHHHHHHHHHHT---------TTSCEEEEECTTCHHHHHHHHH---TCCSEEEEECSCTTTCCCCC----
T ss_pred CEEEEecCCcHhHHHHHHHHHH---------hcCCEEEEeCCCCHHHHHHhhc---cCCcEEEEeCCCCCCCcccC----
Confidence 5677777777764322111000 1112345566779999999998 47889999999999999887
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccc-eeeEeCH-HHHhhcCCCCccCC
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPV-SAVLADK-EVMLCIQPGEHGST 159 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~-g~~~~~~-~~~~~~~~~~~~~~ 159 (306)
+++|.++|++||+++|+||+|+++... .. . .++.+..+.|++|.++ +|. ++ |++++++ ++++.+.+.....+
T Consensus 156 l~~i~~l~~~~~~~li~De~~~~~~~~-~~--~-~~~~di~~~s~sK~~~~~~~-~~~G~~~~~~~~l~~~l~~~~~~~~ 230 (386)
T 1cs1_A 156 IAKICHLAREVGAVSVVDNTFLSPALQ-NP--L-ALGADLVLHSCTKYLNGHSD-VVAGVVIAKDPDVVTELAWWANNIG 230 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTCTTTC-CG--G-GGTCSEEEEETTTTTTCSSC-CCCEEEEESSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccC-Cc--c-ccCceEEEEcCcccccCCCC-ceeEEEEeCcHHHHHHHHHHHHhcC
Confidence 999999999999999999999865322 11 1 2333344458999998 455 66 8999875 78777765433334
Q ss_pred CCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh----CCCce---------eeEEEeeeEEEEEEecCC
Q 021893 160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ----FPNYV---------KEVRGRGLFNAVEFDKTA 226 (306)
Q Consensus 160 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~~~~~---------~~~~~~g~~~~i~~~~~~ 226 (306)
...+++++.++..+++.+.. ..++..++.+.+.+.|+++... ++... ...++.|.++.+.+..
T Consensus 231 ~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 306 (386)
T 1cs1_A 231 VTGGAFDSYLLLRGLRTLVP--RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-- 306 (386)
T ss_dssp CBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--
T ss_pred CCCCHHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--
Confidence 55677777776666654422 3445555566666655553100 00000 0013357788887753
Q ss_pred ChhhHHHHHHHHHHCCceecc---C---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 227 LPVSAYDICLKMKERGILAKP---T---------------------------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 227 ~~~~~~~~~~~l~~~Gi~~~~---~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
. ...+.+.|.++||.+.+ + .++++|++++...++++++.+.+.|+++
T Consensus 307 --~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 307 --D-EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp --C-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred --C-HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 2 55778888889998863 1 1579999999877777777777766654
No 134
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=5.6e-21 Score=169.67 Aligned_cols=211 Identities=16% Similarity=0.059 Sum_probs=155.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCCc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
|+++|++ +++++|++++++|++|.+.+ +++|.++|++| |+++|+||+|+ ++.. .+....+ .+|
T Consensus 113 d~~~l~~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~~~~~~--~~d 177 (352)
T 1iug_A 113 RPEDVAK------EGYAGLLLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVG--EVALEAM--GVD 177 (352)
T ss_dssp CTTTSCC------SSCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTB--CCCSGGG--TCS
T ss_pred CHHHHhc------cCCcEEEEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCc--ceecccc--Cee
Confidence 5566654 35788999999999999887 99999999999 99999999997 3221 1222222 345
Q ss_pred EE--EecccccCCcccceeeEeCHHHHhhcCC-------------C-CccCCCCCCHHHHHHHHHHHHHHhhc--cHHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQP-------------G-EHGSTFGGNPLASAVAIASLDVIRDE--KLAER 185 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~aa~~al~~~~~~--~~~~~ 185 (306)
++ +++|++.++. ++|++++++++++.+.+ . .....++.+...+.++.++++.+.+. +..++
T Consensus 178 ~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 256 (352)
T 1iug_A 178 AAASGSQKGLMCPP-GLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLAL 256 (352)
T ss_dssp EEEEESSSTTCCCS-CEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred EEEecCcccccCCC-ceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 6679888776 88999999987765321 0 11223456777888888888876553 56677
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCC
Q 021893 186 SAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLS 260 (306)
Q Consensus 186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~ 260 (306)
++++++++.+.|+++ . .....+ ..+.++++.+++ +.+..++.+.|.++||.+.++ ..+++|++++..
T Consensus 257 ~~~~~~~l~~~L~~~--g---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~ 328 (352)
T 1iug_A 257 KAWQNALLYGVGEEG--G---LRPVPKRFSPAVAAFYLPE---GVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGA 328 (352)
T ss_dssp HHHHHHHHHHHHHHT--T---CEESCSSBCTTCEEEECCT---TCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSS
T ss_pred HHHHHHHHHHHHHHC--C---CcccccccCCeEEEEEcCC---CCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEcccc
Confidence 788888888888775 1 111112 256778887763 345778999999999999876 368999999888
Q ss_pred CCHHHHHHHHHHHHHHHhhhc
Q 021893 261 ISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++++++++++++|+++++ ++
T Consensus 329 ~~~~~i~~~~~~l~~~~~-~~ 348 (352)
T 1iug_A 329 YDRYEALGVAGMFREVLE-EI 348 (352)
T ss_dssp CCHHHHHHHHHHHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHHHHH-Hh
Confidence 899999999999999988 65
No 135
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.85 E-value=3.3e-20 Score=169.05 Aligned_cols=214 Identities=15% Similarity=0.188 Sum_probs=152.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||++||+||+|+. |.. ..+.....+|++
T Consensus 152 d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~----~~~-~~~~~~~~~di~ 219 (423)
T 3lvm_A 152 DLKELEAAMR---DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQSV----GKL-PIDLSQLKVDLM 219 (423)
T ss_dssp CHHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTTT----TTS-CCCTTTSCCSEE
T ss_pred CHHHHHHhcC---CCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhhc----CCC-CcChhhcCCCEE
Confidence 8999999997 47899999999999999888 99999999999999999999973 111 122223346666
Q ss_pred --EecccccCCcccceeeEeCHHHHhhcCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893 126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR 194 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~ 194 (306)
|+||.+ |+. ++|+++++++.++.+.+... ....+.+...+.++.++++.+.. +++.+++++++++++
T Consensus 220 ~~s~sK~~-g~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 297 (423)
T 3lvm_A 220 SFSGHKIY-GPK-GIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLW 297 (423)
T ss_dssp EEESTTTT-SCS-SCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechHHhc-CCC-CeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555954 454 68999999887777765432 22335577777777788877655 445666667777777
Q ss_pred HHHHHHHhhCCCceeeEEE---eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------------------
Q 021893 195 QHLFKIQQQFPNYVKEVRG---RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------------------- 249 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------------------- 249 (306)
+.|+++ ++....... .+.++.+.+. ..+..++.+.|.+ +.+.++.
T Consensus 298 ~~L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~ 367 (423)
T 3lvm_A 298 NGIKDI----EEVYLNGDLEHGAPNILNVSFN----YVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDEL 367 (423)
T ss_dssp HHHTTS----TTEEEESCSTTBCTTEEEEEET----TSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHH
T ss_pred HHHhcC----CCEEEeCCccccCCCeEEEEeC----CCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccc
Confidence 666543 212111111 1345555553 3456778888876 7776642
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893 250 -DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM 284 (306)
Q Consensus 250 -~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~ 284 (306)
.+++|++++..++++++++++++|+++++ ++.+.
T Consensus 368 ~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~-~~~~~ 402 (423)
T 3lvm_A 368 AHSSIRFSLGRFTTEEEIDYTIELVRKSIG-RLRDL 402 (423)
T ss_dssp HHTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHTS
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHHH-Hhhcc
Confidence 38999999988999999999999999998 77553
No 136
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.85 E-value=3.9e-21 Score=179.29 Aligned_cols=269 Identities=11% Similarity=0.045 Sum_probs=172.0
Q ss_pred ceEEEEecCCCCcccchhccc-CCccccccCCCCCCC-----------ccccc-------CCCHHHHHHHHHhc---CCc
Q 021893 3 AIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG-----------HLKVD-------FGDITALEKIFKES---GDQ 60 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~-------~~d~~~le~~i~~~---~~~ 60 (306)
..|++.+|+..+...++..+. .+....-...|.++. ++.++ ..|+++|+++|++. +.+
T Consensus 158 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 237 (500)
T 3tcm_A 158 DDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGIN 237 (500)
T ss_dssp GGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCE
T ss_pred ccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCC
Confidence 356777777766655555554 222221111223322 12333 34899999999862 236
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--cccc----ccCC---CCCc---EEEec
Q 021893 61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLAS----DWEE---VRPD---MVILG 128 (306)
Q Consensus 61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~----~~~~---~~~d---~~s~s 128 (306)
+++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+. ..++ ...+ -..+ +.|+|
T Consensus 238 ~k~ivl~~p~NPtG~~-~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S 316 (500)
T 3tcm_A 238 VRALVVINPGNPTGQV-LAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVS 316 (500)
T ss_dssp EEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESS
T ss_pred ceEEEEECCCCCCccc-CCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCC
Confidence 8888888889999865 5789999999999999999999999997644321 1111 1111 1112 23899
Q ss_pred ccc-c-CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHH-----------HHhh-ccHHHHHHHHHH
Q 021893 129 KAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLD-----------VIRD-EKLAERSAHLGE 191 (306)
Q Consensus 129 K~~-~-~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~-----------~~~~-~~~~~~~~~~~~ 191 (306)
|.+ | +|+ |+||+++ ++++++.+.... ...++.+.+++.++..+++ +... +.+.++++++++
T Consensus 317 K~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 394 (500)
T 3tcm_A 317 KGYYGECGK-RGGYFEITGFSAPVREQIYKIA-SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAK 394 (500)
T ss_dssp STTTCCGGG-CCEEEEEESCCTTHHHHHHHHH-HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcc-ceEEEEEeCCCHHHHHHHHHHH-hcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999 5 799 9999988 888887775432 2345667888877776664 2111 335566777777
Q ss_pred HHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh----------hhHHHHH-HHHHHCCceeccC-------CCCEE
Q 021893 192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP----------VSAYDIC-LKMKERGILAKPT-------HDTIV 253 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~----------~~~~~~~-~~l~~~Gi~~~~~-------~~~~l 253 (306)
.+.+.|+++ +++....+..|+++|+.+.... . .....++ +.|.++||.+.|+ +.+++
T Consensus 395 ~l~~~L~~~----~g~~~~~~~g~~~~~~~~~lp~-~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~i 469 (500)
T 3tcm_A 395 ALEHAFNKL----EGITCNEAEGAMYVFPQICLPQ-KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHF 469 (500)
T ss_dssp HHHHHHHTS----TTEECCCCCBTTEECCEECCCH-HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBE
T ss_pred HHHHHHhcC----CCcEEecCCeEEEEeeeecCch-hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEE
Confidence 777777664 2233334455666664443100 0 0122334 4555679999864 34589
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 254 RLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 254 Ri~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
|+++. .+++++++++++|+++++ ++.
T Consensus 470 Ris~~--~~~e~i~~~i~~l~~~~~-~~~ 495 (500)
T 3tcm_A 470 RCTIL--PQEDKIPAVISRFTVFHE-AFM 495 (500)
T ss_dssp EEESC--SCTTTHHHHHHHHHHHHH-HHH
T ss_pred EEEEC--CCHHHHHHHHHHHHHHHH-HHH
Confidence 99965 889999999999999988 654
No 137
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.85 E-value=4.2e-21 Score=178.89 Aligned_cols=270 Identities=13% Similarity=0.078 Sum_probs=172.6
Q ss_pred ceEEEEecCCCCcccchhcccCCcc----ccccCCCCCCC-----------cccccCC-------CHHHHHHHHHhcCC-
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNE----AIRGFGPLLPG-----------HLKVDFG-------DITALEKIFKESGD- 59 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~-------d~~~le~~i~~~~~- 59 (306)
..|++++|+.++....+..+..+.. ..-...|.++. ++.++++ |+++|++++++++.
T Consensus 154 ~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~ 233 (498)
T 3ihj_A 154 DNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH 233 (498)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT
T ss_pred ccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc
Confidence 3567777777776655555544321 11111233322 2333333 89999999986432
Q ss_pred -cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--cccccc----C------CC-CCcEE
Q 021893 60 -QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLASDW----E------EV-RPDMV 125 (306)
Q Consensus 60 -~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~~~----~------~~-~~d~~ 125 (306)
++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|..+.+.+. ..++.. . .. ...+.
T Consensus 234 ~~~k~i~l~np~NPTG~v-~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 312 (498)
T 3ihj_A 234 CDPKVLCIINPGNPTGQV-QSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFH 312 (498)
T ss_dssp SEEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEE
T ss_pred CCCeEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEe
Confidence 58888888889999965 5789999999999999999999999997644432 111111 0 01 12244
Q ss_pred Eecccc-c-CCcccceeeE---eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHH-----------HHhh-ccHHHHHHH
Q 021893 126 ILGKAL-G-GGVIPVSAVL---ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLD-----------VIRD-EKLAERSAH 188 (306)
Q Consensus 126 s~sK~~-~-~G~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~-----------~~~~-~~~~~~~~~ 188 (306)
|+||.+ | +|+ |+||++ .++++++.+..... ...+.+.+++.++..+++ ++.. +...+++++
T Consensus 313 S~SK~~~G~~G~-R~G~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~ 390 (498)
T 3ihj_A 313 STSKGYMGECGY-RGGYMEVINLHPEIKGQLVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAK 390 (498)
T ss_dssp ESSSSTTCCSSS-CCEEEEEESCCHHHHHHHHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCccc-ceEEEEEecCCHHHHHHHHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHH
Confidence 899999 5 799 999998 58888877764322 344567777776666553 1111 234566667
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--------ChhhHHHH-H-HHHHHCCceeccC-------CCC
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--------LPVSAYDI-C-LKMKERGILAKPT-------HDT 251 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--------~~~~~~~~-~-~~l~~~Gi~~~~~-------~~~ 251 (306)
+++.+.+.|+++ +++....+..|.++|+.+.... .+....++ + +.|.++||.+.|+ +.+
T Consensus 391 ~~~~l~~~L~~~----~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~ 466 (498)
T 3ihj_A 391 KAKLTEDLFNQV----PGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTY 466 (498)
T ss_dssp HHHHHHHHHHTS----TTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCC
T ss_pred HHHHHHHHHhcC----CCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCC
Confidence 777777777654 2333334456666666553210 01123333 4 4455679999873 345
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 252 IVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++|+++ ..++++++.++++|+++++ ++.
T Consensus 467 ~~Ris~--~~~~e~l~~~i~~L~~~~~-~~~ 494 (498)
T 3ihj_A 467 HFRMTI--LPPVEKLKTVLQKVKDFHI-NFL 494 (498)
T ss_dssp BEEEEC--CSCHHHHHHHHHHHHHHHH-HHH
T ss_pred EEEEEe--CCCHHHHHHHHHHHHHHHH-HHH
Confidence 899995 5899999999999999988 654
No 138
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.85 E-value=3e-21 Score=176.08 Aligned_cols=218 Identities=15% Similarity=0.096 Sum_probs=148.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--cccc----ccCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLAS----DWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~----~~~~ 119 (306)
|++.|++.+++++++++++++++++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+. ..+. +..+
T Consensus 181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVD-LNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANL 259 (420)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCC
Confidence 8999999999766678999999999999965 5789999999999999999999999998765431 1111 1222
Q ss_pred CCCcEEEeccccc-CCcccceeeEe---CHHHHhh----cCCCCccCCCCCCHHHHHHHHHHHHHHh--------hccHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLA---DKEVMLC----IQPGEHGSTFGGNPLASAVAIASLDVIR--------DEKLA 183 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~~ 183 (306)
....+.|+||.++ +|+ |+||+++ ++++++. ++..........+.+++.++...++... .++..
T Consensus 260 ~~i~~~S~SK~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 338 (420)
T 4f4e_A 260 NVFVSSSFSKSFSLYGE-RVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR 338 (420)
T ss_dssp CEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCccCcCcCC-CcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 2334559999999 799 9999863 4565443 2211112333445666666665554321 13356
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCH
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISS 263 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~ 263 (306)
++++++++.+.+.|++..... ++....+..|.++|+.++ ...+.+.+.++||++.+++ |+++. ..++
T Consensus 339 ~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~g~~~~~~~~-------~~~~~~~l~~~gI~v~~~~----Ris~~-~~~~ 405 (420)
T 4f4e_A 339 DRIRAMRNGLVERLKAAGIER-DFSFINAQRGMFSYSGLT-------SAQVDRLREEFGIYAVSTG----RICVA-ALNT 405 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCSS-CCTHHHHSCSSEEECCCC-------HHHHHHHHHHHCEECCTTS----EEEGG-GCCT
T ss_pred HHHHHHHHHHHHHHHhcCCCC-CceeECCCccEEEEeCCC-------HHHHHHHHHhCCEEecCCC----eEEEe-cCCH
Confidence 677777777777777653210 122233456666665443 3456777778899999863 88864 3367
Q ss_pred HHHHHHHHHHHHHHh
Q 021893 264 NELQEGSKALHDVLE 278 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~ 278 (306)
+++++++++|+++++
T Consensus 406 ~~i~~~~~~l~~~l~ 420 (420)
T 4f4e_A 406 RNLDVVANAIAAVLK 420 (420)
T ss_dssp TTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 779999999998763
No 139
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.85 E-value=1.7e-21 Score=176.03 Aligned_cols=217 Identities=16% Similarity=0.102 Sum_probs=147.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--ccccc----ccCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLAS----DWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~----~~~~ 119 (306)
|++.|++.+++++++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++...+ ...+. +..+
T Consensus 159 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 3fsl_A 159 RFNDLLATLKTLQAGSIVLLHPCCHNPTGAD-LTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL 237 (397)
T ss_dssp CHHHHHHHHTTCCTTCEEEECSSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred cHHHHHHHHHhCCCCCEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence 8999999999766678999999999999965 578889999999999999999999999875442 11111 1223
Q ss_pred CCCcEEEeccccc-CCcccceeeEe---CHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHH------h--hccHH
Q 021893 120 VRPDMVILGKALG-GGVIPVSAVLA---DKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVI------R--DEKLA 183 (306)
Q Consensus 120 ~~~d~~s~sK~~~-~G~~~~g~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~------~--~~~~~ 183 (306)
....+.|+||.++ +|+ |+||+++ ++++++.+... ........+.+++.++..+++.. . .++..
T Consensus 238 ~~i~~~S~SK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 316 (397)
T 3fsl_A 238 PALVSNSFSKIFSLYGE-RVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMR 316 (397)
T ss_dssp CEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred CEEEEecccccccCcCC-CeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3344559999999 899 9999864 45555433211 11223334556666665555421 1 13456
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCH
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISS 263 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~ 263 (306)
++++++++.+.+.|++..... ++....+..|.++|+.++ ...+.+.|.++||.+.|++ |+++. ..++
T Consensus 317 ~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~g~----Ris~~-~~~~ 383 (397)
T 3fsl_A 317 TRILAMRQELVKVLSTEMPER-NFDYLLNQRGMFSYTGLS-------AAQVDRLREEFGVYLIASG----RMCVA-GLNT 383 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCTTS-CCTHHHHCCSSEEECCCC-------HHHHHHHHHTTCEECCTTC----EEEGG-GCCT
T ss_pred HHHHHHHHHHHHHHHhcCCCC-CceeecCCceEEEecCCC-------HHHHHHHHHhCCEEECCCC----eEEEE-ecCH
Confidence 777788888888888763210 122223345666665443 3456777788899999874 88864 3366
Q ss_pred HHHHHHHHHHHHHH
Q 021893 264 NELQEGSKALHDVL 277 (306)
Q Consensus 264 ~~i~~~~~~l~~~l 277 (306)
++|+.++++|++++
T Consensus 384 ~~i~~~~~~l~~~l 397 (397)
T 3fsl_A 384 ANVQRVAKAFAAVM 397 (397)
T ss_dssp TTHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHhhC
Confidence 78999999998763
No 140
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.85 E-value=4.5e-20 Score=166.58 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=160.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.++++ ++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ ++.. .+... ...+|+
T Consensus 130 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~--~~~~~--~~~~d~ 198 (396)
T 2ch1_A 130 FSLETLARAIELH--QPKCLFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV--PFYMD--KWEIDA 198 (396)
T ss_dssp CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCCE
T ss_pred CCHHHHHHHHHhC--CCCEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCC--ccchh--hcCcCE
Confidence 5899999999853 5788999999999998887 9999999999999999999998 3321 22222 234576
Q ss_pred EE--ecccccCCcccceeeEeCHHHHhhcCCCC-----------------------ccCCCCCCHHHHHHHHHHHHHHhh
Q 021893 125 VI--LGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------------HGSTFGGNPLASAVAIASLDVIRD 179 (306)
Q Consensus 125 ~s--~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~aa~~al~~~~~ 179 (306)
++ ++|.++++. ++|++++++++++.+.... ....++.+..++.++.++++.+.+
T Consensus 199 ~~~s~~K~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 277 (396)
T 2ch1_A 199 VYTGAQKVLGAPP-GITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE 277 (396)
T ss_dssp EECCCC-CCCCCS-SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEcCCccccCCC-CeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 64 559999887 8899999998887653210 112234577788888888887643
Q ss_pred ---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----C
Q 021893 180 ---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----H 249 (306)
Q Consensus 180 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~ 249 (306)
++..++++++++++.+.|++++ +. ...... ..+.++++.++. +.+..++++.|+++ ||.+.++ .
T Consensus 278 ~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gi~v~~g~~~~~ 351 (396)
T 2ch1_A 278 EGLENQIKRRIECAQILYEGLGKMG--LD-IFVKDPRHRLPTVTGIMIPK---GVDWWKVSQYAMNNFSLEVQGGLGPTF 351 (396)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHT--CC-BSSCSGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCBCCBCCCGGGT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCC--Ce-eccCCccccCCceEEEEcCC---CCCHHHHHHHHHHhCCEEEecCccccC
Confidence 3467788888888988888872 21 111110 123466776653 34677899999876 9999875 3
Q ss_pred CCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 DTIVRLTP-PLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 ~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
++++|+++ +...+++++++++++|+++++ ++..
T Consensus 352 ~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~-~~~~ 385 (396)
T 2ch1_A 352 GKAWRVGIMGECSTVQKIQFYLYGFKESLK-ATHP 385 (396)
T ss_dssp TTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HHCT
T ss_pred CCEEEEECCCCcCCHHHHHHHHHHHHHHHH-HhCc
Confidence 67999998 456789999999999999999 7653
No 141
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.85 E-value=1.6e-20 Score=175.67 Aligned_cols=222 Identities=16% Similarity=0.068 Sum_probs=152.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc-----ccc---cccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR-----SGR---MLASDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~-----~g~---~~~~~~ 117 (306)
|+++|+++|+ +++++|+++++++++|.+.+ +++|.++|++||++||+||+|+++.. .|. .+....
T Consensus 228 d~~~Le~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~ 300 (514)
T 3mad_A 228 DVAAMREAIT---PNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRL 300 (514)
T ss_dssp CHHHHHHHCC---TTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTS
T ss_pred CHHHHHHHhc---cCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccC
Confidence 8999999997 47999999999999998887 99999999999999999999997532 233 232333
Q ss_pred CCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCC-----------ccCCCCCCHHHHHHHHHHHHHHhh---ccHH
Q 021893 118 EEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------HGSTFGGNPLASAVAIASLDVIRD---EKLA 183 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aa~~al~~~~~---~~~~ 183 (306)
.+++..+.+++|.+.+|. ++|+++++++.+....... .....+.+.....++.++++.+.. ++..
T Consensus 301 ~g~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~ 379 (514)
T 3mad_A 301 EGVTSVSADTHKYGYGAK-GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDAT 379 (514)
T ss_dssp TTCCEEEECTTTTTCCCS-SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEECchhccCCCC-CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHH
Confidence 444333445669988888 9999988776554322100 000112333444555566665544 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCC-CCC
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPP-LSI 261 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~-~~~ 261 (306)
++..++++++++.|+++ ++....... ..++++... ..+..++.+.|.++||.+... .++.+|+++. ..+
T Consensus 380 ~~~~~~~~~l~~~L~~~----~g~~~~~~~-~~~~~~~~~----~~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~ 450 (514)
T 3mad_A 380 RRILQAADRLKAGVRAI----PSLKILGDP-LWVIAVASD----ELNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHT 450 (514)
T ss_dssp HHHHHHHHHHHHHHHTS----TTCEESSCC-SSEEEEECS----SSCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGG
T ss_pred HHHHHHHHHHHHHHhhC----CCeEEeCCC-eEEEEEeCC----CCCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCC
Confidence 77777778888777763 112111112 335565443 345778999999999988432 3678999986 445
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCC
Q 021893 262 SSNELQEGSKALHDVLELDLPKMR 285 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~~~~~~~~ 285 (306)
+++++++++++|+++++ ++.+..
T Consensus 451 ~~e~i~~~l~~L~~~l~-~~~~~~ 473 (514)
T 3mad_A 451 EPGVVDRFLADLQDAVA-QVRAHP 473 (514)
T ss_dssp STTHHHHHHHHHHHHHH-HHHHCT
T ss_pred CHHHHHHHHHHHHHHHH-HHHhCC
Confidence 67999999999999998 776543
No 142
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.85 E-value=4.5e-20 Score=165.61 Aligned_cols=215 Identities=17% Similarity=0.147 Sum_probs=153.0
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC--CEEEEehhhhcccccccccccccCCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g--i~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
.|++.|++.++ +++++|++++++|++|.+.+ +++|.++|++|| +++|+||+|+ ++.. .+.... ...
T Consensus 127 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~--~~~~~~--~~~ 194 (384)
T 1eg5_A 127 VKLEELEKLVD---EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKI--PFSLEK--LEV 194 (384)
T ss_dssp BCHHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTS--CCCCTT--TCC
T ss_pred cCHHHHHHHhC---CCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCc--ccCchh--cCC
Confidence 47999999987 47899999999999998888 999999999999 9999999997 4322 222222 245
Q ss_pred cEE--EecccccCCcccceeeEeCHHH--HhhcCCCC---ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893 123 DMV--ILGKALGGGVIPVSAVLADKEV--MLCIQPGE---HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL 193 (306)
Q Consensus 123 d~~--s~sK~~~~G~~~~g~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l 193 (306)
|++ |+||.++. . ++||+++++++ ...+.... ...+++.+.+.+.++.++++.+.+ ++..++++++.+++
T Consensus 195 di~~~s~sK~~g~-~-G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 272 (384)
T 1eg5_A 195 DYASFSAHKFHGP-K-GVGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKL 272 (384)
T ss_dssp SEEEEEGGGGTSC-T-TCEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CEEEecHHHhcCC-C-ceEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 666 55598662 1 36889998875 22222211 123456788888888888887543 44667777888888
Q ss_pred HHHHHHHHhhCCCceeeEE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---------------------
Q 021893 194 RQHLFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--------------------- 249 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------------------- 249 (306)
.+.|++. +.....+ ..+.++++.++. .+..++.+.|.++||.+.++.
T Consensus 273 ~~~L~~~-----g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~ 343 (384)
T 1eg5_A 273 VSGLMNL-----GAHIITPLEISLPNTLSVSFPN----IRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRR 343 (384)
T ss_dssp HHHHHTT-----TCEECSCTTSBCTTEEEEECTT----CCHHHHHHHHHHTTEECBC------------CHHHHTTCCHH
T ss_pred HHHhCCC-----CeEEeCCcccCCCCEEEEEeCC----CCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChh
Confidence 8877762 1211111 134556665542 356789999999999998741
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 --DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+++|++++..++++++++++++|+++++ ++.+
T Consensus 344 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~-~~~~ 378 (384)
T 1eg5_A 344 IAQGAIRISLCKYNTEEEVDYFLKKIEEILS-FLDL 378 (384)
T ss_dssp HHHHEEEEECCTTCCHHHHHHHHHHHHHHHH-HC--
T ss_pred hcCCeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 36899998877899999999999999999 7653
No 143
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.85 E-value=9.7e-21 Score=171.56 Aligned_cols=222 Identities=11% Similarity=0.070 Sum_probs=151.1
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+..++.+|++++++.++ +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+.+. .+..+ .+
T Consensus 131 ~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~-~~~~~---~~ 199 (398)
T 2rfv_A 131 VRFVDAAKPEEIRAAMR---PETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMSPY-CQQPL---QL 199 (398)
T ss_dssp EEEECTTSHHHHHHHCC---TTEEEEEEESSBTTTTBCCC----HHHHHHHHHHTTCEEEEECTTTCTT-TCCGG---GG
T ss_pred EEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccc-cCCch---hh
Confidence 35566679999999987 47999999999999999887 9999999999999999999998431 12221 22
Q ss_pred CCCCcEEEeccccc-CCcccc-eeeEeCHHHHh-hcCCCCccC-CCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALG-GGVIPV-SAVLADKEVML-CIQPGEHGS-TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 119 ~~~~d~~s~sK~~~-~G~~~~-g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
+.+..+.|+||.++ +|. |+ |++++++++++ .++...... +.+.+++.+.++.++++.+.. ..++..++.+.+.
T Consensus 200 ~~di~~~s~sK~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~ 276 (398)
T 2rfv_A 200 GADIVVHSVTKYINGHGD-VIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLGI--RMERHCENALKIA 276 (398)
T ss_dssp TCSEEEEETTTTTTCSSC-CCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHH
T ss_pred CCcEEEEeCcccccCCCC-ceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHH
Confidence 33344568999997 577 88 99999998876 565433333 456788888888888765422 2344555666666
Q ss_pred HHHHHHH-------h---hCCCceee---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------------
Q 021893 195 QHLFKIQ-------Q---QFPNYVKE---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------- 248 (306)
Q Consensus 195 ~~L~~~~-------~---~~~~~~~~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------- 248 (306)
+.|++.. . ..|+.... .++.|.++++.++.. ......+.+.+...|+.++++
T Consensus 277 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~ 354 (398)
T 2rfv_A 277 RFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG--LEAGRRMINSVELCLLAVSLGDTETLIQHPASMT 354 (398)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH--HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHT
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC--HHHHHHHHHhCCcceeccCCCCcceeeecccccc
Confidence 6665431 0 00000000 124677888877631 123444555555556665543
Q ss_pred ------------C--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 249 ------------H--DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 249 ------------~--~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
+ ++++|++++..+++++++.+.+.|+++
T Consensus 355 ~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 355 HSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp SSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1 579999999999999998888888653
No 144
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.85 E-value=2.3e-20 Score=165.93 Aligned_cols=205 Identities=15% Similarity=0.101 Sum_probs=146.4
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc--ccccCCCCCcEEEeccccc-CCc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML--ASDWEEVRPDMVILGKALG-GGV 135 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~--~~~~~~~~~d~~s~sK~~~-~G~ 135 (306)
+++++|+++.++|++|.+.+ .+.+++|.+.|++ .++|+||+|+++...+... ..+..+....+.|+||.++ +|+
T Consensus 128 ~~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~--~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~ 204 (350)
T 3fkd_A 128 SNMDFCWLCNPNNPDGRLLQ-RTEILRLLNDHPD--TTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGL 204 (350)
T ss_dssp TTCSEEEEESSCTTTCCCCC-HHHHHHHHHHCTT--SEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGG
T ss_pred CCCCEEEEeCCCCCcCCCCC-HHHHHHHHHhCCC--CEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcch
Confidence 36788888889999997765 4455555555544 4999999999876555432 1222333345569999999 899
Q ss_pred ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893 136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213 (306)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 213 (306)
|+||+++++++++.+.... .+++.+++++.++.++++... .+...+.. ++++.+.+.|+++ + .+...+.
T Consensus 205 -r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~~----~-~~~~~~~ 275 (350)
T 3fkd_A 205 -RIGYIVANKDFMKRVAAFS--TPWAVNALAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNRL----D-GVEVHPS 275 (350)
T ss_dssp -CCEEEECCHHHHHHHHTTC--CTTCSCHHHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHHS----T-TEEECCC
T ss_pred -heEeEEeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhcC----C-CcEECCC
Confidence 9999999999998887643 356778888888888887543 13333333 6667777777654 2 2333456
Q ss_pred eeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 214 RGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.|.++++.++. . +..++++.|.+ +||.+.++. .+++|++++ +.++++.+++.|+++++ +...
T Consensus 276 ~~~~~~~~~~~---~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~-~~~~ 344 (350)
T 3fkd_A 276 GTTFFLLRLKK---G-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLE-KYEG 344 (350)
T ss_dssp SSSEEEEEESS---S-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHT-C---
T ss_pred CCcEEEEECCC---C-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHH-Hhcc
Confidence 67788887774 2 67889999999 899998752 689999943 78999999999999988 5543
No 145
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.84 E-value=6.1e-20 Score=162.18 Aligned_cols=204 Identities=15% Similarity=0.140 Sum_probs=146.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|++.|++. .++++++++.++|++|.+.+ ++++.++|+++++ +|+||+|.+|+..+... ....+....+.
T Consensus 126 d~~~l~~~-----~~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~-~~~~~~~i~~~ 194 (337)
T 3p1t_A 126 DPNDLAQV-----SRDDCVVLANPSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRARG-LAYGENELVFR 194 (337)
T ss_dssp CHHHHTTC-----CTTEEEEEESSCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSSSC-CCCBTTEEEEE
T ss_pred CHHHHHhh-----cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhccccccc-cccCCCEEEEe
Confidence 77887754 35688888889999999888 8899999999997 56699999775443321 22223334456
Q ss_pred Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhh
Q 021893 126 ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQ 203 (306)
Q Consensus 126 s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 203 (306)
|+||.++ +|+ |+||+++++++++.+... ...++.+.+++.++.++++.... ++..+++.++++++.+.|++.+
T Consensus 195 S~sK~~g~~G~-r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 269 (337)
T 3p1t_A 195 SFSKSYGLAGL-RLGALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG-- 269 (337)
T ss_dssp ESSSTTCCTTT-CCEEEECCHHHHHHHHTT--SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred eCchhccCcch-heEEEEeCHHHHHHHHhh--cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCc--
Confidence 9999998 899 999999999999888763 23456678888887777764321 2344555666666777776652
Q ss_pred CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.. ..+..+.++++..++ ..++.+.|.++||.+.++. ++++|++++ ++++++.++++|+++++
T Consensus 270 ---~~-~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 270 ---YR-VASSEANFVLVENAA------GERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp ---CC-BCCCSSSEEEEECTT------THHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred ---CE-ECCCCCeEEEEEcCC------HHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 21 233456677765542 3567888999999999753 589999954 78999999999987765
No 146
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.84 E-value=7.6e-21 Score=172.77 Aligned_cols=217 Identities=15% Similarity=0.148 Sum_probs=147.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---ccccc-cCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLASD-WEEVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~~-~~~~~ 121 (306)
|+++|++.++++++++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++++.+. ..... ..+..
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVD-PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV 247 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhC
Confidence 8999999998765567888878889999955 5789999999999999999999999998765541 11111 11222
Q ss_pred Cc---EEEeccccc-CCcccceee---EeCHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-------h-hccH
Q 021893 122 PD---MVILGKALG-GGVIPVSAV---LADKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVI-------R-DEKL 182 (306)
Q Consensus 122 ~d---~~s~sK~~~-~G~~~~g~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-------~-~~~~ 182 (306)
++ +.|+||.++ +|+ |+||+ +.+++ +++.+.........+.+.+++.++..+++.. . .++.
T Consensus 248 ~~~i~~~S~SK~~g~~G~-riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 326 (409)
T 4eu1_A 248 PNLIVAQSFSKNFGLYGH-RCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQM 326 (409)
T ss_dssp SCCEEEEECTTTSSCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcEEEEecCcccccCccC-CceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33 349999998 899 99996 55677 5555543333344556778888877777632 1 1345
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCC
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSI 261 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~ 261 (306)
.++++++++++++.|++.+... .+....+..|.++|+.++ .+++..++ ++||.+.|+ .|+++.. .
T Consensus 327 ~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~ll~~~gv~v~p~----~Ri~~~~-~ 392 (409)
T 4eu1_A 327 SSRIAEVRKRLVSELKACGSVH-DWSHIERQVGMMAYTGLT--------REQVELLRSEYHIYMTLN----GRAAVSG-L 392 (409)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCS-CCHHHHHSCSSEEECCCC--------HHHHHHHHHHHCEECCTT----CEEEGGG-C
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-CcceecCCceEEEEeCCC--------HHHHHHHHHcCCEEEcCC----CEEEEEe-c
Confidence 6677777888888877653100 011222345555554322 24456665 569999986 3777643 5
Q ss_pred CHHHHHHHHHHHHHHHh
Q 021893 262 SSNELQEGSKALHDVLE 278 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~ 278 (306)
++++++.++++|+++++
T Consensus 393 ~~~~i~~~~~~l~~~l~ 409 (409)
T 4eu1_A 393 NSTNVEYVSQAIHNVTK 409 (409)
T ss_dssp CTTTHHHHHHHHHHHHC
T ss_pred CHhhHHHHHHHHHHHhC
Confidence 66779999999988763
No 147
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.84 E-value=2e-20 Score=167.55 Aligned_cols=214 Identities=16% Similarity=0.121 Sum_probs=148.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||+ +|+|++|+. +. ..+....++.+..+.
T Consensus 127 d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~~-~~--~~~~~~~~~~d~~~~ 195 (382)
T 4hvk_A 127 DVSFIDQKLR---DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATASV-GQ--IEVDVEKIGADMLTI 195 (382)
T ss_dssp CHHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTTB-TT--BCCCHHHHTCSEEEE
T ss_pred CHHHHHHHhc---cCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHhc-CC--CCCCchhcCCCEEEE
Confidence 8999999987 57899999999999999888 9999999999999 999999972 11 112222233333445
Q ss_pred EecccccCCcccceeeEeCHHHHhhcCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893 126 ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 196 (306)
Q Consensus 126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~ 196 (306)
|++|.++ +. ++|+++++++. .+.+... ....+.+...+.++.++++...+ ++..++.+++++++.+.
T Consensus 196 s~~K~~g-~~-g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4hvk_A 196 SSNDIYG-PK-GVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp ESGGGTS-CT-TCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eHHHhcC-CC-ceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 7779654 44 57888877654 3333211 11334567777777777776543 34566666777777766
Q ss_pred HHHHHhhCCCceeeEE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------C
Q 021893 197 LFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------D 250 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------~ 250 (306)
|+++ ++...... ..+.++.+.++ ..+..++.+.|.++||.+.++. .
T Consensus 272 L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (382)
T 4hvk_A 272 VLKI----EESYLNGHPEKRLPNNVNVRFS----YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAH 343 (382)
T ss_dssp HTTS----TTEEECSCSSSBCTTEEEEEET----TCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHH
T ss_pred HhcC----CCeEEeCCccccCCCEEEEEEC----CCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcC
Confidence 6643 21211111 11345566554 2457789999999999998753 5
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++|++++..++++++++++++|+++++ ++.+
T Consensus 344 ~~iRl~~~~~~t~e~i~~~~~~l~~~~~-~~~~ 375 (382)
T 4hvk_A 344 GTLLLTLGRYNTDEDVDRLLEVLPGVIE-RLRS 375 (382)
T ss_dssp TEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 8999999988999999999999999998 7654
No 148
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.83 E-value=6.3e-20 Score=162.30 Aligned_cols=194 Identities=13% Similarity=0.090 Sum_probs=138.5
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCccc
Q 021893 60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIP 137 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~ 137 (306)
++++|+++.++|++|.+.+ .+.+++ +++..| ++|+||+|+++... .... .+..+....+.|+||.++ +|+ |
T Consensus 138 ~~~~v~l~~p~nptG~~~~-~~~l~~---l~~~~~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~-r 210 (335)
T 1uu1_A 138 EGDVVFIPNPNNPTGHVFE-REEIER---ILKTGA-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQ-R 210 (335)
T ss_dssp TTEEEEEESSCTTTCCCCC-HHHHHH---HHHTTC-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGG-C
T ss_pred CCCEEEEeCCCCCCCCCCC-HHHHHH---HHHhCC-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCccc-C
Confidence 5677776666889997764 454444 444448 89999999976432 2121 222333445669999998 899 9
Q ss_pred ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893 138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 216 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~ 216 (306)
+||+++++++++.+.... .+++.+++++.++.++++... .++..++++++++++.+.|++.+ + . ..+..|.
T Consensus 211 ~G~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~---~-~~~~~~~ 282 (335)
T 1uu1_A 211 VGYVVASEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG--Y---R-ITDSRGN 282 (335)
T ss_dssp CEEEEECHHHHHHHHHHS--CTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHT--C---C-BCCCCSS
T ss_pred eEEEEeCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC--c---E-EcCCCCe
Confidence 999999999988776422 346788899988888887632 24466777888888888888762 2 1 1234567
Q ss_pred EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
++++.++. .+..++.+.|.++||.+.+ ..+++|+++. +.+++++++++|+++
T Consensus 283 ~~~~~~~~----~~~~~~~~~l~~~gi~v~~-~~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 283 FVFVFMEK----EEKERLLEHLRTKNVAVRS-FREGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp EEEEECCT----HHHHHHHHHHHHHTEEEEE-ETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred EEEEECCC----CCHHHHHHHHHHCCEEEEE-CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 77877652 4567899999999999998 4779999953 468899999988753
No 149
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.83 E-value=7.1e-20 Score=161.58 Aligned_cols=217 Identities=14% Similarity=0.063 Sum_probs=149.8
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH-cCCEEEEehhhhcccccccccccccC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~-~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
..++..|++.+++.++ +++++|++++++|++|.+.+ +++|.++|++ +|+++|+||+|+... .... . .+
T Consensus 66 ~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~~li~D~a~~~~~-~~~~--~-~~ 134 (331)
T 1pff_A 66 DFIDMAVPGNIEKHLK---PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFASPI-LTNP--L-DL 134 (331)
T ss_dssp EEECTTSTTHHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTHHH-HCCG--G-GG
T ss_pred EEeCCCCHHHHHHhhc---CCCeEEEEECCCCCcCcccC----HHHHHHHHhhhcCCEEEEECCCcccc-cCCh--h-hc
Confidence 4455678999999887 57999999999999999887 9999999999 999999999998321 1111 1 23
Q ss_pred CCCCcEEEeccccc-CCccc-ceeeEeCH-HHHhhcCCCCcc-CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALG-GGVIP-VSAVLADK-EVMLCIQPGEHG-STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 119 ~~~~d~~s~sK~~~-~G~~~-~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
+....+.|++|.++ +|. | +|++++++ ++++.+++.... .+...+++.+.++..+++.+.. ..+...++.+.+.
T Consensus 135 ~~d~~~~s~~K~~~~~~~-r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~ 211 (331)
T 1pff_A 135 GVDIVVHSATKYINGHTD-VVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDM--RVKRAAENAQKVA 211 (331)
T ss_dssp TCSEEEEETTTTTSSSSS-CCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCcEEEEECccccCCCCC-ceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHHHHHHH
Confidence 44444558899998 466 7 78999998 888888776555 4556777777777677765432 2333444445555
Q ss_pred HHHHHHHh----------hCCCcee---eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------------
Q 021893 195 QHLFKIQQ----------QFPNYVK---EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------- 248 (306)
Q Consensus 195 ~~L~~~~~----------~~~~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------- 248 (306)
+.+++... ..++... ..++.+.++.+.+. +..++.+.|.++||.+.+.
T Consensus 212 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~ 285 (331)
T 1pff_A 212 EFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD------GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPA 285 (331)
T ss_dssp HHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS------SHHHHHHHHHTCSSSEECSSCCSSSCEEECHH
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC------CHHHHHHHHHhCCCceeccCCCCcceeeecch
Confidence 55544210 0000000 01235667777664 3456788888999965321
Q ss_pred -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 249 -----------------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 249 -----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
.++++|++++..+++++++.+++.|+++
T Consensus 286 ~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 286 SMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred hhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1579999999999999999999888653
No 150
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.83 E-value=3.7e-20 Score=167.53 Aligned_cols=239 Identities=16% Similarity=0.146 Sum_probs=158.5
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+....|||....+.... ......+..++.+|+++|+++++ +++++|++++++|++|.+.+
T Consensus 106 d~Vi~~~~~y~~~~~~~~~~~---------~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---- 169 (392)
T 3qhx_A 106 DHVVIPDDAYGGTFRLIDKVF---------TGWNVEYTPVALADLDAVRAAIR---PTTRLIWVETPTNPLLSIAD---- 169 (392)
T ss_dssp CEEEEETTCCHHHHHHHHHTG---------GGGTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----
T ss_pred CEEEEeCCCcchHHHHHHHHH---------HhcCcEEEEeCCCCHHHHHHhhC---CCCeEEEEECCCCCCcEEec----
Confidence 467777777765432221110 01112346677789999999998 57999999999999999988
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-C-cccceeeEeC-HHHHhhcCCCCcc
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLAD-KEVMLCIQPGEHG 157 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G-~~~~g~~~~~-~~~~~~~~~~~~~ 157 (306)
+++|.++|++||+++|+||+|+.+ +.....+..+|++ |++|.+++ | . ++|+++.+ +++++.+....+.
T Consensus 170 l~~i~~la~~~g~~li~D~~~~~~------~~~~~~~~~~di~~~S~sK~lg~~g~~-~~G~v~~~~~~~~~~l~~~~~~ 242 (392)
T 3qhx_A 170 IAGIAQLGADSSAKVLVDNTFASP------ALQQPLSLGADVVLHSTTKYIGGHSDV-VGGALVTNDEELDQSFAFLQNG 242 (392)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTCT------TTCCGGGGTCSEEEEETTTTTTCSSCC-CCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCccc------ccCChHHhCCcEEEEcCccccCCCCCc-eEEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999999732 1122223455665 68899994 4 6 89999987 6777777654444
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------EEeeeEEE
Q 021893 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNA 219 (306)
Q Consensus 158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~~g~~~~ 219 (306)
.++..+++.+.++...++.+.. ..++..++.+.+.+.|++. + .+..+ ++.|.+++
T Consensus 243 ~g~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L~~~----~-~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~ 315 (392)
T 3qhx_A 243 AGAVPGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFLAEH----P-AISTVLYPGLPSHPGHAVAARQMRGFGGMVS 315 (392)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC----T-TEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred cCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcC----C-CcceEECCCCCCCCCHHHHHHhCCCCceEEE
Confidence 5566778877777766655432 2445556666666666543 1 22222 44588999
Q ss_pred EEEecCCChhhHHHHHHHHHHCCceeccC------------------------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 220 VEFDKTALPVSAYDICLKMKERGILAKPT------------------------HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------------~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
+.+... ......|...|...|+.++.+ .++.||++++...+++.++.+.++|
T Consensus 316 ~~l~~~--~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 316 VRMRAG--RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp EEETTC--HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred EEeCCc--HHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 998741 245667777777666554422 2578999977665555555554443
No 151
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=8.4e-20 Score=164.02 Aligned_cols=212 Identities=13% Similarity=0.085 Sum_probs=152.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
.|+++|++++++ .++++|++++++|++|.+.+ +++|.++|++| |+++|+||+|+. +.. .+....+ .+
T Consensus 124 ~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~~-~~~--~~~~~~~--~~ 192 (385)
T 2bkw_A 124 VPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCSI-GCE--EFEFDEW--GV 192 (385)
T ss_dssp CCHHHHHHHHHH--SCCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTTT-TTS--CCCTTTT--TC
T ss_pred CCHHHHHHHHhc--CCCCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECcccc-CCc--ccccccc--Cc
Confidence 389999999985 26789999999999999888 99999999999 999999999972 111 1222222 35
Q ss_pred cEE--EecccccCCcccceeeEeCHHHHh-hcCC----------------------CCc---cCCCCCCHHHHHHHHHHH
Q 021893 123 DMV--ILGKALGGGVIPVSAVLADKEVML-CIQP----------------------GEH---GSTFGGNPLASAVAIASL 174 (306)
Q Consensus 123 d~~--s~sK~~~~G~~~~g~~~~~~~~~~-~~~~----------------------~~~---~~~~~~~~~~~~aa~~al 174 (306)
|++ +++|+++|+. ++|++++++++++ .+.+ ... ...++.+..++.++.+++
T Consensus 193 d~~~~s~~K~~~~~~-G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 271 (385)
T 2bkw_A 193 DFALTASQKAIGAPA-GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVAL 271 (385)
T ss_dssp SEEEEESSSTTCCCS-CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHH
T ss_pred eEEEecCccccccCC-cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHH
Confidence 554 6679998776 7799999988876 5421 000 011356777777777888
Q ss_pred HHHhhc---cHHHHHHHHHHHHHHHH-HHHHhhCCCceeeEE----EeeeEEEEEEecCCChhhHHHHHHHHHHCCceec
Q 021893 175 DVIRDE---KLAERSAHLGEELRQHL-FKIQQQFPNYVKEVR----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 246 (306)
Q Consensus 175 ~~~~~~---~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~ 246 (306)
+.+.+. +..++++++++++.+.| +++ .+ .+.... ..+.++++.+++ ..++.+.|.++||.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~v~ 341 (385)
T 2bkw_A 272 KEILEEGLHKRWDLHREMSDWFKDSLVNGL--QL--TSVSRYPSNMSAHGLTAVYVAD------PPDVIAFLKSHGVVIA 341 (385)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTTT--CC--EESSCSSSTTBCSSCEEEECSC------HHHHHHHHHHTTEECB
T ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHhc--Cc--eecccCcccccCCceEEEecCC------HHHHHHHHHHCCeEEe
Confidence 876543 35677777788888777 654 11 111111 246777877652 5689999999999998
Q ss_pred cCC-----CCEEEEe-CC---CCCCHHHHHHHHHHHHHHHh
Q 021893 247 PTH-----DTIVRLT-PP---LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 247 ~~~-----~~~lRi~-~~---~~~t~~~i~~~~~~l~~~l~ 278 (306)
++. .+++|++ ++ ..++++++++++++|+++++
T Consensus 342 ~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 342 GGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp CCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred CCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 752 5799999 44 24799999999999999887
No 152
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.83 E-value=4.8e-20 Score=167.41 Aligned_cols=221 Identities=13% Similarity=0.053 Sum_probs=149.5
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH-cCCEEEEehhhhccccccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLARSGRMLASDW 117 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~-~gi~li~De~~~g~~~~g~~~~~~~ 117 (306)
+..++.+|+++|++.++ +++++|++++++|++|.+.+ +++|.++|++ ||+++|+||+|+++... ..+ +
T Consensus 129 ~~~v~~~d~~~l~~~i~---~~t~~v~l~~p~NptG~v~~----l~~i~~la~~~~~~~li~De~~~~~~~~-~~~--~- 197 (404)
T 1e5e_A 129 VDFINTAIPGEVKKHMK---PNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCSPMIT-NPV--D- 197 (404)
T ss_dssp EEEECTTSTTHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTCTTTC-CGG--G-
T ss_pred EEEECCCCHHHHHHhcC---CCCcEEEEECCCCCCCcccC----HHHHHHHHHhhcCCEEEEECCCchhhhC-Ccc--c-
Confidence 35566679999999987 57999999999999999887 9999999999 99999999999965321 222 1
Q ss_pred CCCCCcEEEeccccc-CCcccc-eeeEeCHHHHh-hcCCCCccC-CCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 118 EEVRPDMVILGKALG-GGVIPV-SAVLADKEVML-CIQPGEHGS-TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~-~G~~~~-g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
++....+.|+||+++ +|+ |+ ||+++++++++ .+....... +...+++.+.++..+++.+. ...++..++.+.+
T Consensus 198 ~~~di~~~S~sK~~~~~g~-ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l 274 (404)
T 1e5e_A 198 FGVDVVVHSATKYINGHTD-VVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLN--IRMKAESENAMKV 274 (404)
T ss_dssp GTCSEEEEETTTTTTCSSC-CCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHH
T ss_pred cCCEEEEEcCccccCCCCC-CeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHH
Confidence 343344558999998 687 97 99999999887 776654443 44567888877777776432 1233445555555
Q ss_pred HHHHHHHH----hhCC------Ccee---eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc---C---------
Q 021893 194 RQHLFKIQ----QQFP------NYVK---EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP---T--------- 248 (306)
Q Consensus 194 ~~~L~~~~----~~~~------~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~---~--------- 248 (306)
.+.+++.. ..++ +... ..++.|.++.+.+.. ...+..+.+.+.||.+.. +
T Consensus 275 ~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~ 349 (404)
T 1e5e_A 275 AEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS-----GFEGAKKLLDNLKLITLAVSLGGCESLIQHP 349 (404)
T ss_dssp HHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT-----HHHHHHHHHHTCSSSEESSCCCSSSCEEECG
T ss_pred HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC-----CHHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence 55555431 0000 0000 012347777777653 123455556666874332 1
Q ss_pred ----------------C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 249 ----------------H--DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 249 ----------------~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+ ++++|++++. ++++++++.|+++++ .+.+
T Consensus 350 ~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~-~~~~ 397 (404)
T 1e5e_A 350 ASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLD-ALLR 397 (404)
T ss_dssp GGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH-HHHC
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH-HHHH
Confidence 1 5799999665 789999999999988 6543
No 153
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=5.6e-20 Score=166.58 Aligned_cols=255 Identities=11% Similarity=0.060 Sum_probs=167.4
Q ss_pred cceEEEEecCCCCcc--cchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCC
Q 021893 2 QAIIVSCCGCFHGRT--LAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP 79 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~ 79 (306)
+.+|++.+.+|++.. ..+....+. ..... +...+ ..-...|+++|++.+++. ++++|+++.++++ ...+
T Consensus 109 gd~Vl~~~~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~-~~~~~~d~~~l~~~l~~~--~~~~v~~~~p~~~--~~~~- 179 (407)
T 2dkj_A 109 GDTLMGMDLAAGGHLTHGSRVNFSGK-LYKVV--SYGVR-PDTELIDLEEVRRLALEH--RPKVIVAGASAYP--RFWD- 179 (407)
T ss_dssp TCEEEEECGGGTCCGGGTCTTSHHHH-HSEEE--EECCC-TTTSSCCHHHHHHHHHHH--CCSEEEECCSSCC--SCCC-
T ss_pred CCEEEEecccccCccchHHHHHhcCc-eEEEE--ecCCC-cccCccCHHHHHHHHhhc--CCeEEEEeccccC--CCCC-
Confidence 467899988887763 222222221 00100 11000 001235899999999852 5677777433332 4555
Q ss_pred hhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCcEE--EecccccCCcccceeeEeC-HHHHhhcCCCC
Q 021893 80 DGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGE 155 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~ 155 (306)
+++|.++|++||+++|+||+|++ +...|.... ... .+|++ |+||+++ |. ++||++++ +++++.+....
T Consensus 180 ---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~~~s~sK~l~-g~-~~G~~~~~~~~~~~~l~~~~ 251 (407)
T 2dkj_A 180 ---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN--PLP-YAHVVTSTTHKTLR-GP-RGGLILSNDPELGKRIDKLI 251 (407)
T ss_dssp ---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--CTT-TCSEEEEESSGGGC-CC-SCEEEEESCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHcCCEEEEEccccccccccCccCC--ccc-cccEEEEeccccCC-CC-CceEEEECCHHHHHHHHhhh
Confidence 99999999999999999999984 543443221 111 24655 8899887 45 77999999 78887765432
Q ss_pred -ccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893 156 -HGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231 (306)
Q Consensus 156 -~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 231 (306)
.....+.+...++++.++++.... ++..++++++.+++++.|++.+ + .+...+..+.++++.++.. ..+.
T Consensus 252 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~ 325 (407)
T 2dkj_A 252 FPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG--Y--RIVTGGTDNHLFLVDLRPK--GLTG 325 (407)
T ss_dssp TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT--C--EEGGGSCSSSEEEEECGGG--TCCH
T ss_pred cccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC--c--eeecCCCCceEEEEECccc--CCCH
Confidence 223334556566667777777543 4567788888888888888752 1 1111134678888887631 1356
Q ss_pred HHHHHHHHHCCceeccC----------CCCEEEEeCCC----CCCHHHHHHHHHHHHHHHhhh
Q 021893 232 YDICLKMKERGILAKPT----------HDTIVRLTPPL----SISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 232 ~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~----~~t~~~i~~~~~~l~~~l~~~ 280 (306)
.++.+.|.++||.+.++ .++++|++++. ..+++++++++++|+++++ +
T Consensus 326 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~-~ 387 (407)
T 2dkj_A 326 KEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALL-E 387 (407)
T ss_dssp HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHh-c
Confidence 78999999999998864 25689999754 3789999999999999998 6
No 154
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.83 E-value=2.6e-19 Score=162.20 Aligned_cols=246 Identities=15% Similarity=0.098 Sum_probs=160.9
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+|++...+||+....+...... ....+..++.+|++++++.++ +++++|++++++|++|.+.+
T Consensus 105 d~vl~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---- 168 (398)
T 1gc0_A 105 DEVLLGNTLYGCTFAFLHHGIGE---------FGVKLRHVDMADLQALEAAMT---PATRVIYFESPANPNMHMAD---- 168 (398)
T ss_dssp CEEEEESSCCSHHHHHHHHTGGG---------GTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----
T ss_pred CEEEEeCCCchhHHHHHHHHHHH---------cCCEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccccc----
Confidence 56777777777754333211110 011234556679999999997 57999999999999999887
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccc-eeeEeCHHHHh-hcCCCCcc-C
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPV-SAVLADKEVML-CIQPGEHG-S 158 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~-g~~~~~~~~~~-~~~~~~~~-~ 158 (306)
+++|.++|++||+++|+||+|+.+. .+..+ .++.+..+.|++|.++ +|. |+ |+++++++.++ .+...... .
T Consensus 169 l~~i~~l~~~~~~~li~D~~~~~~~-~~~~~---~~~~d~~~~S~sK~~~~~~~-~~~G~l~~~~~~~~~~~~~~~~~~~ 243 (398)
T 1gc0_A 169 IAGVAKIARKHGATVVVDNTYCTPY-LQRPL---ELGADLVVHSATKYLSGHGD-ITAGIVVGSQALVDRIRLQGLKDMT 243 (398)
T ss_dssp HHHHHHHHGGGTCEEEEECTTTHHH-HCCGG---GGTCSEEEEETTTTTTCSSS-CCCEEEEECHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEECCCcccc-cCCch---hhCceEEEECCccccCCCCC-CeEEEEEEChHHHHHHHHHHhhccC
Confidence 9999999999999999999998431 12221 2344445568899999 566 87 89999987665 45543333 3
Q ss_pred CCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----------hCCCcee---eEEEeeeEEEEEEecC
Q 021893 159 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----------QFPNYVK---EVRGRGLFNAVEFDKT 225 (306)
Q Consensus 159 ~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----------~~~~~~~---~~~~~g~~~~i~~~~~ 225 (306)
+...+++.+.++..+++.+.. ..++..++.+.+.+.|++... ..|+... ..++.|.++.+.+..
T Consensus 244 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~- 320 (398)
T 1gc0_A 244 GAVLSPHDAALLMRGIKTLNL--RMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG- 320 (398)
T ss_dssp CCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-
T ss_pred CCCCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-
Confidence 455678887777777765422 345556666666666665210 0000000 012467788887752
Q ss_pred CChhhHHHHHHHHHHCCceecc---C---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 226 ALPVSAYDICLKMKERGILAKP---T---------------------------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 226 ~~~~~~~~~~~~l~~~Gi~~~~---~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
......+.+.+.|+.... + .++.+|++++..+++++++.+.+.|++
T Consensus 321 ----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 321 ----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp ----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 233455666666766432 1 147999999999999999998888876
Q ss_pred H
Q 021893 276 V 276 (306)
Q Consensus 276 ~ 276 (306)
+
T Consensus 397 ~ 397 (398)
T 1gc0_A 397 S 397 (398)
T ss_dssp H
T ss_pred c
Confidence 4
No 155
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.82 E-value=7.2e-21 Score=172.65 Aligned_cols=256 Identities=13% Similarity=0.086 Sum_probs=160.5
Q ss_pred EEEEecCCCCcccchhcccC--CccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893 5 IVSCCGCFHGRTLAAISMSC--DNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 5 ii~~~~~~hg~~~~~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v 64 (306)
|++..|+-++...++..+.. + +..-...|.++. ++.+|. .|++.|++.+++. ++++++
T Consensus 100 i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~i 177 (405)
T 3k7y_A 100 TIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI-PNGSSV 177 (405)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS-CSSCEE
T ss_pred EEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC-CCCeEE
Confidence 56677777665555544443 3 333333344433 233332 1789999999864 346677
Q ss_pred EEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---cccc----ccCCCCCcEEEeccccc-CCc
Q 021893 65 LFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLAS----DWEEVRPDMVILGKALG-GGV 135 (306)
Q Consensus 65 ~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~----~~~~~~~d~~s~sK~~~-~G~ 135 (306)
+++++ ||+||. +++++.+++|.++|++||+++|+||+|.++...+. ..+. +.......+.||||.++ +|+
T Consensus 178 ~l~~~~~NPTG~-~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl 256 (405)
T 3k7y_A 178 ILQISCYNPCSV-NIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGE 256 (405)
T ss_dssp EECCSSCTTTCC-CCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTT
T ss_pred EEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccc
Confidence 77665 899995 56899999999999999999999999998754321 1111 11111223449999999 999
Q ss_pred ccceeeEe---CHHHHhhcCC----CCccCCCCCCHHHHHHHHHHHHHH------hh--ccHHHHHHHHHHHHHHHHH--
Q 021893 136 IPVSAVLA---DKEVMLCIQP----GEHGSTFGGNPLASAVAIASLDVI------RD--EKLAERSAHLGEELRQHLF-- 198 (306)
Q Consensus 136 ~~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~aa~~al~~~------~~--~~~~~~~~~~~~~l~~~L~-- 198 (306)
|+||+++ ++++++.+.. .......+.+.+++.++..+++.- .+ ....++++++++.+.+.|+
T Consensus 257 -RiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~ 335 (405)
T 3k7y_A 257 -RAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETY 335 (405)
T ss_dssp -TEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999853 5665544321 111122234567766666555431 11 2234556777777777777
Q ss_pred --HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 199 --KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 199 --~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
+++... .+....+..|+++|+.++. ++++.|.++||++.|++ ||+.. ..++++|++++++|+++
T Consensus 336 ~~~~g~~~-~~~~~~p~gg~f~~~~l~~--------~~~~~L~~~gV~v~p~~----Ris~a-~~~~~~i~~~~~~i~~~ 401 (405)
T 3k7y_A 336 QKKYNLNY-DWNVYKKQRGLFSFVPLLA--------KIAEHLKTHHIYIINNG----RINVS-GITKNNVDYIADKICLS 401 (405)
T ss_dssp GGGGTCCC-CGGGGSSCCSSEEECGGGG--------GGTTTTTTTTEECCTTS----EEEGG-GCCTTHHHHHHHHHHHH
T ss_pred hhhcCCCC-CCccccCCceEEEecCCCH--------HHHHHHHHCCEeecCCC----eEEEe-ccCHHHHHHHHHHHHHH
Confidence 543110 1223345677777765432 34566677799999964 88842 35788999999999998
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
++
T Consensus 402 ~~ 403 (405)
T 3k7y_A 402 LS 403 (405)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 156
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.82 E-value=3.3e-20 Score=170.71 Aligned_cols=220 Identities=12% Similarity=0.136 Sum_probs=149.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---ccccccC-CCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLASDWE-EVR 121 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~~~~-~~~ 121 (306)
|++.|++.++++++++++++++.++|++|.. .+.+.+++|.++|++||+++|+||+|.++++.+. ......+ ...
T Consensus 188 d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 266 (448)
T 3meb_A 188 DFSNTKKDIQSAPEKSIFLFHACAHNPSGID-FTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAG 266 (448)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcC
Confidence 8999999999765568898999999999965 5789999999999999999999999998765541 1111111 122
Q ss_pred Cc---EEEeccccc-CCcccceee--Ee--------C-H----HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh----
Q 021893 122 PD---MVILGKALG-GGVIPVSAV--LA--------D-K----EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---- 178 (306)
Q Consensus 122 ~d---~~s~sK~~~-~G~~~~g~~--~~--------~-~----~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---- 178 (306)
.+ +.|+||.++ .|+ |+||+ ++ + + ++++.+.......+.+.+.+++.++..+++...
T Consensus 267 ~~~i~~~S~SK~~g~~G~-RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 345 (448)
T 3meb_A 267 VEVLVAQSFSKNFGLYGE-RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQM 345 (448)
T ss_dssp CCEEEEEECTTTSCCGGG-CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHH
T ss_pred CcEEEEecccccCCCccc-cceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHH
Confidence 33 559999999 899 99997 55 3 4 555555432333444566777777776654321
Q ss_pred ----hccHHHHHHHHHHHHHHHHHHHHhhCCC------ceeeEEEeeeEEEEEEecCCChhhHHHHHHHH-HHCCceecc
Q 021893 179 ----DEKLAERSAHLGEELRQHLFKIQQQFPN------YVKEVRGRGLFNAVEFDKTALPVSAYDICLKM-KERGILAKP 247 (306)
Q Consensus 179 ----~~~~~~~~~~~~~~l~~~L~~~~~~~~~------~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~ 247 (306)
.++..++++++++.+.+.|++.. .++ +....+..|++.|..++ .+++..| .++||++.|
T Consensus 346 ~~~~~~~~~~~~~~~r~~l~~~L~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~ll~~~gV~v~~ 415 (448)
T 3meb_A 346 FYDNVKEMSARIHRMRSLLHASLAKRK--TPGPGSKGTWDHILTAIGMFTFTGLT--------PEHVDYLKEKWSIYLVK 415 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSTTTCCCTHHHHCCSSEEECCCC--------HHHHHHHHHHHCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCcCcccccceeCCCceEEEecCCC--------HHHHHHHHHhCCEEEeC
Confidence 13355667777777777777652 111 22223445666554432 2455555 566999998
Q ss_pred CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 248 THDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 248 ~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+. .|+++. ..++++|++++++|+++++ ++.
T Consensus 416 G~---gRis~a-~~~~~~i~~~~~~l~~~l~-~~~ 445 (448)
T 3meb_A 416 AG---GRMSMC-GLTESNCDYVAEAIHDAVT-KLP 445 (448)
T ss_dssp GG---GEEEGG-GCCTTTHHHHHHHHHHHHH-HSC
T ss_pred CC---cEEEEe-cCCHHHHHHHHHHHHHHHH-hcc
Confidence 53 288864 3366779999999999998 554
No 157
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.82 E-value=2.3e-20 Score=168.97 Aligned_cols=218 Identities=18% Similarity=0.099 Sum_probs=141.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---cccc----ccC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLAS----DWE 118 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~----~~~ 118 (306)
|++.+++.+++..++++++++++++|++|.. .+.+.+++|.++|++||+++|+||+|.+++..+. ..+. +..
T Consensus 161 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
T 7aat_A 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG 239 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence 6888888888755678999999999999964 6899999999999999999999999998765442 1111 112
Q ss_pred CCCCcEEEeccccc-CCcccceeeEe---CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHH------h--hccH
Q 021893 119 EVRPDMVILGKALG-GGVIPVSAVLA---DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVI------R--DEKL 182 (306)
Q Consensus 119 ~~~~d~~s~sK~~~-~G~~~~g~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~------~--~~~~ 182 (306)
.....+.|+||.++ +|+ |+||+++ +++ +.+.+.........+.+..++.++...++.. . .++.
T Consensus 240 ~~~i~~~S~sK~~~~~G~-RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (401)
T 7aat_A 240 IDVVLSQSYAKNMGLYGE-RAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGM 318 (401)
T ss_dssp CCCEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCcccccccC-ceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 22334469999999 899 9999876 555 3343332222223344455555554444211 1 1334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCC
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSIS 262 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t 262 (306)
.++++++++++.+.|++.... +.+....+..|.++|+.++ .+.+...+.++||.+.++ +|++++.. +
T Consensus 319 ~~~~~~~r~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~----~Ris~~~~-~ 385 (401)
T 7aat_A 319 ADRIISMRTQLVSNLKKEGSS-HNWQHITDQIGMFCFTGLK-------PEQVERLTKEFSIYMTKD----GRISVAGV-A 385 (401)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-SCCHHHHHCCSSEEECCCC-------HHHHHHHHHHHCEECCTT----CEEEGGGC-C
T ss_pred HHHHHHHHHHHHHHHHhcCCC-CCCceecCCcceEEecCCC-------HHHHHHHHHhCCEeccCC----CeEEeccC-C
Confidence 567777777777777765311 0122223445666564332 333434445679999765 68887654 4
Q ss_pred HHHHHHHHHHHHHHHh
Q 021893 263 SNELQEGSKALHDVLE 278 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~ 278 (306)
.++|++++++|+++++
T Consensus 386 ~~~i~~~~~~l~~~~~ 401 (401)
T 7aat_A 386 SSNVGYLAHAIHQVTK 401 (401)
T ss_dssp TTTHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhC
Confidence 4559999999988763
No 158
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.82 E-value=3.4e-20 Score=168.80 Aligned_cols=217 Identities=18% Similarity=0.172 Sum_probs=144.4
Q ss_pred CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893 38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW 117 (306)
Q Consensus 38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~ 117 (306)
.+..++.+|+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||++||+||+|+. +.......
T Consensus 147 ~~~~v~~~d~~~l~~ai~---~~t~~v~le~p~NptG~~~~----l~~i~~la~~~g~~livDe~~~~----~~~~~~~~ 215 (414)
T 3ndn_A 147 QTVFVDGDDLSQWERALS---VPTQAVFFETPSNPMQSLVD----IAAVTELAHAAGAKVVLDNVFAT----PLLQQGFP 215 (414)
T ss_dssp EEEEECTTCHHHHHHHTS---SCCSEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTH----HHHCCCGG
T ss_pred EEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccc----HHHHHHHHHHcCCEEEEECCCcc----cccCCchh
Confidence 346677789999999997 57899999999999999887 99999999999999999999972 11111113
Q ss_pred CCCCCcEEEecccccC-C-cccceeeEeCHHHHh-hcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 118 EEVRPDMVILGKALGG-G-VIPVSAVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 118 ~~~~~d~~s~sK~~~~-G-~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
++.+..+.|+||.+++ | + ++|+++++++.+. .++..........++..+.++...++.+.. ..++..++.+.+.
T Consensus 216 ~g~div~~S~sK~l~~~G~~-~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~ 292 (414)
T 3ndn_A 216 LGVDVVVYSGTKHIDGQGRV-LGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETLAI--RVQHSNASAQRIA 292 (414)
T ss_dssp GTCSEEEEETTTTTTCSSCC-CCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHH
T ss_pred cCCCeEeccCCccccCCCCc-eEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 3445556688999985 6 6 8999999988765 444221222223455655555555544422 2445556666666
Q ss_pred HHHHHHHhhCCCceee------------------EEEeeeEEEEEEecCCC--hhhHHHHHHHHHHCCceeccC------
Q 021893 195 QHLFKIQQQFPNYVKE------------------VRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPT------ 248 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~~~--~~~~~~~~~~l~~~Gi~~~~~------ 248 (306)
+.|++. | .+.. .++.|.++++.++.... ......|.+.|...++.++.+
T Consensus 293 ~~L~~~----p-~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~ 367 (414)
T 3ndn_A 293 EFLNGH----P-SVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLV 367 (414)
T ss_dssp HHHHTC----T-TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred HHHhcC----C-CEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCcee
Confidence 666553 1 1211 23468899999964100 134667777777666554432
Q ss_pred ---------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 ---------------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 ---------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.||++.+. ++++.+++.|++++
T Consensus 368 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al 413 (414)
T 3ndn_A 368 THPATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL 413 (414)
T ss_dssp ECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred eCccccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 25789999543 56677777777765
No 159
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.82 E-value=3.8e-19 Score=159.57 Aligned_cols=215 Identities=17% Similarity=0.128 Sum_probs=147.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
.|+++|++.++ +++++|++++++|++|.+.+ +++|.++|++||++ |+||+|+ ++.. .+....++.+.-+
T Consensus 126 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~--~~~~~~~~~di~~ 194 (382)
T 4eb5_A 126 VDVSFIDQKLR---DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQI--EVDVEKIGADMLT 194 (382)
T ss_dssp BCHHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTB--CCCHHHHTCSEEE
T ss_pred cCHHHHHHHhc---CCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCc--ccCccccCCCEEE
Confidence 37999999987 46899999999999999887 99999999999999 9999998 3221 1212222222223
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQ 195 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~ 195 (306)
.|+||.++ .. ++|+++++++. .+.+.. .....+.+...+.++.++++.+.+ ++..++++++++++.+
T Consensus 195 ~s~sK~~g-~~-g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 270 (382)
T 4eb5_A 195 ISSNDIYG-PK-GVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIID 270 (382)
T ss_dssp EETGGGTC-CS-SCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehHHhcC-CC-ceEEEEEcccc--ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 47779754 22 47888887763 222211 112234566677777777776654 3345666666666666
Q ss_pred HHHHHHhhCCCceeeEEE---eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------
Q 021893 196 HLFKIQQQFPNYVKEVRG---RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------------------- 249 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------------- 249 (306)
.|+++ ++.....+. .+.++++.++. .+..++.+.|.++||.+.++.
T Consensus 271 ~L~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~ 342 (382)
T 4eb5_A 271 NVLKI----EESYLNGHPEKRLPNNVNVRFSY----IEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEA 342 (382)
T ss_dssp HHTTS----TTEEECSCSSSBCTTEEEEEETT----SCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHH
T ss_pred HHhhC----CCeEEeCCcccCCCCEEEEEeCC----cCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhcc
Confidence 66553 212111111 25566776652 456789999999999998753
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+++|++++..++++++++++++|+++++ ++.+
T Consensus 343 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~-~~~~ 375 (382)
T 4eb5_A 343 HGTLLLTLGRYNTDEDVDRLLEVLPGVIE-RLRS 375 (382)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence 47999998888899999999999999998 7665
No 160
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.81 E-value=1.5e-19 Score=166.74 Aligned_cols=221 Identities=10% Similarity=0.089 Sum_probs=143.5
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+..++.+|+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|... ..... .+ +
T Consensus 199 v~~v~~~d~~~l~~~i~---~~tk~v~l~~p~NptG~v~~----l~~i~~la~~~gi~livDea~~~g-~~~~~--~~-~ 267 (464)
T 1ibj_A 199 VKRVNTTKLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMSP-VLSRP--LE-L 267 (464)
T ss_dssp EEEECTTSHHHHHHHCC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTCT-TTCCG--GG-T
T ss_pred EEEeCCCCHHHHHHHhc---cCceEEEEeCCCCCCCEeec----HHHHHHHHHHcCCEEEEECCCccc-ccCCh--hh-c
Confidence 35666779999999997 57999999999999999887 999999999999999999999731 11111 12 2
Q ss_pred CCCCcEEEecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~ 195 (306)
+.+..+.|++|++++ |+ ++||++++ +++++.+...........+++.+.++.++++.+.. ..++..+....+.+
T Consensus 268 ~~div~~S~sK~~~g~~Gl-~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~--r~~~~~~~~~~l~~ 344 (464)
T 1ibj_A 268 GADIVMHSATKFIAGHSDV-MAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAM 344 (464)
T ss_dssp TCSEEEEETTTTTTCSSCC-CCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHH
T ss_pred CCEEEEECCcccccCCCCC-cEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHH
Confidence 333334488999985 88 99999998 47777665432223344567777777766653321 11222222233333
Q ss_pred HHHHHH----------hhCCCcee---eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------
Q 021893 196 HLFKIQ----------QQFPNYVK---EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------- 249 (306)
Q Consensus 196 ~L~~~~----------~~~~~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------- 249 (306)
.+++.. ...|+... ...+.|.++++.+.. ......+.+.|...|+.++++.
T Consensus 345 ~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~ 421 (464)
T 1ibj_A 345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS---VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_dssp HHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC---HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred HHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC---HHHHHHHHHhcCcceEeecCCCCceeeeccccccc
Confidence 333210 01110100 112356788888742 2234467888776777665432
Q ss_pred --------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 250 --------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 250 --------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++++|++++. +++++++++|+++++ .+
T Consensus 422 ~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~-~~ 462 (464)
T 1ibj_A 422 ASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFK-TF 462 (464)
T ss_dssp CSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHH-SC
T ss_pred ccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHh-hc
Confidence 4689999765 889999999999988 54
No 161
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.81 E-value=2.5e-19 Score=158.90 Aligned_cols=221 Identities=18% Similarity=0.199 Sum_probs=149.6
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCC-CcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccCC
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEA-GVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~-G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~~ 119 (306)
|+++|+++++++ .+++++|++++++|++ | .+.+.+.+++|.++|++||+++|+||+|.. +...+.....-...
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G-~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 193 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG-RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY 193 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTS-BCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCC-ccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccc
Confidence 899999999742 1368999999999998 6 556788899999999999999999998751 11122111000012
Q ss_pred CCCcEEEecccccCCcccce-eeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893 120 VRPDMVILGKALGGGVIPVS-AVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH 196 (306)
Q Consensus 120 ~~~d~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~ 196 (306)
.+.-++++||+++++ +| +++.++++++.+... ....+...+.+..+++..+++... +.+ ++..++.+.+++.
T Consensus 194 ~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~~~~~l~~~ 268 (347)
T 1jg8_A 194 ADSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRL-KEDHENARFLALK 268 (347)
T ss_dssp CSEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTH-HHHHHHHHHHHHH
T ss_pred ccEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHH
Confidence 222245789999743 45 566788877665432 112223345555556666665432 223 3444567888888
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
|++.. + .+...+..+.++++.++.. ..+..++++.|.++||.+.+.+.+++|++++..++++++++++++|+++
T Consensus 269 L~~~~--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~ 342 (347)
T 1jg8_A 269 LKEIG--Y--SVNPEDVKTNMVILRTDNL--KVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKL 342 (347)
T ss_dssp HHHHT--C--BCCGGGCCSSEEEEECTTS--SSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHhcC--c--eeccCCCcceEEEEEcccc--cCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 87762 2 1111234566778777521 2357789999999999999877789999988888999999999999998
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
++
T Consensus 343 l~ 344 (347)
T 1jg8_A 343 FR 344 (347)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 162
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.81 E-value=9.1e-19 Score=162.22 Aligned_cols=241 Identities=18% Similarity=0.177 Sum_probs=163.9
Q ss_pred eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcc-c
Q 021893 4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVI-I 77 (306)
Q Consensus 4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~-~ 77 (306)
+||+.. .+|+.+..+....+- .++.+|.+ |+++|+++++ +++++|++++++ ++|.+ .
T Consensus 158 ~Vlv~~-~~h~~~~~~~~~~G~------------~vv~v~~~~~~~~d~~~L~~~i~---~~t~~v~~~~pn-~~G~~~~ 220 (474)
T 1wyu_B 158 VVLVPD-SAHGSNPATASMAGY------------QVREIPSGPEGEVDLEALKRELG---PHVAALMLTNPN-TLGLFER 220 (474)
T ss_dssp EEEEET-TSCTHHHHHHHHTTC------------EEEEECBCTTSSBCHHHHHHHCS---TTEEEEEECSSC-TTSCCCT
T ss_pred EEEEeC-CcChhhHHHHHHCCC------------EEEEecCCCCCCcCHHHHHHhhC---CCceEEEEECCC-CCcccCC
Confidence 555544 777877665544331 11222322 8999999997 468999998864 68866 3
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe--ccccc-----CCcccceeeEeCHHHHhh
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALG-----GGVIPVSAVLADKEVMLC 150 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~--sK~~~-----~G~~~~g~~~~~~~~~~~ 150 (306)
+ +++|.++|++||+++|+||+|.... .|. .....+ .+|++++ +|+++ ||+ ++|++++++++++.
T Consensus 221 ~----l~~i~~l~~~~g~~li~Dea~~~~~-~g~-~~~~~~--g~di~~~s~~K~~~~p~g~gG~-~~G~~~~~~~l~~~ 291 (474)
T 1wyu_B 221 R----ILEISRLCKEAGVQLYYDGANLNAI-MGW-ARPGDM--GFDVVHLNLHKTFTVPHGGGGP-GSGPVGVKAHLAPY 291 (474)
T ss_dssp T----HHHHHHHHHHHTCEEEEEGGGGGGT-TTT-CCHHHH--TCSEEECCTTTTTCCCCTTSCC-CCCCEEECGGGGGG
T ss_pred C----HHHHHHHHHHcCCEEEEeCchhhhh-ccC-CCcccC--CCcEEEEeCccccccCCCCCCC-CeEEEEEcHHHHHh
Confidence 5 9999999999999999999997321 221 111222 3677655 79886 357 89999999998877
Q ss_pred cCCC-------------------CccCCCCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893 151 IQPG-------------------EHGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYV 208 (306)
Q Consensus 151 ~~~~-------------------~~~~~~~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~ 208 (306)
+... ....+++.+.+++.++.+.++.+..+++ .++..++++++.+.|++.+ +. ..
T Consensus 292 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g--~~-~~ 368 (474)
T 1wyu_B 292 LPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG--YR-VP 368 (474)
T ss_dssp CCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CB-CS
T ss_pred CCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--cE-ec
Confidence 7521 0112334677788888888876544333 6777888888888888752 21 11
Q ss_pred eeEEEeeeE--EEEEEecCCChhhHHHHHHHHHHCCceecc-----CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893 209 KEVRGRGLF--NAVEFDKTALPVSAYDICLKMKERGILAKP-----THDTIVRLTPPLSISSNELQEGSKALHDVLELD 280 (306)
Q Consensus 209 ~~~~~~g~~--~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-----~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~ 280 (306)
. .+ +.+ +++.++. +.+..++++.|.++||.+.. ...+++|++++..++++++++++++|+++++ +
T Consensus 369 ~--~~-~~~~~~~~~~~~---~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~-~ 440 (474)
T 1wyu_B 369 Y--DG-PSMHEFVAQPPE---GFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK-K 440 (474)
T ss_dssp S--CS-SCCSCEEEBCST---TCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT-S
T ss_pred C--CC-CcceEEEEEcCC---CCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH-h
Confidence 1 11 111 3444421 34678899999999998531 1257899999888899999999999999988 5
No 163
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.81 E-value=7.2e-19 Score=162.38 Aligned_cols=227 Identities=16% Similarity=0.109 Sum_probs=148.0
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc---c-------ccccccc
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG---L-------ARSGRML 113 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g---~-------~~~g~~~ 113 (306)
.|+++||++|++++ +++++|++++++|++|..+++.+.+++|+++|++||++||+||++.. + ++.+..+
T Consensus 167 ~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~ 246 (467)
T 1ax4_A 167 FDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATI 246 (467)
T ss_dssp BCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCH
T ss_pred cCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCch
Confidence 38999999998653 36999999999999855778899999999999999999999998752 1 1222111
Q ss_pred ccccCC----CCCcEE--EecccccCCcccc-eeeEeC-H-HHHhhcCCCC----ccCCCCC-CHHHHHHHHHHHHHHhh
Q 021893 114 ASDWEE----VRPDMV--ILGKALGGGVIPV-SAVLAD-K-EVMLCIQPGE----HGSTFGG-NPLASAVAIASLDVIRD 179 (306)
Q Consensus 114 ~~~~~~----~~~d~~--s~sK~~~~G~~~~-g~~~~~-~-~~~~~~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~ 179 (306)
.... ..+|++ ++||.++ . ++ |+++.+ + ++++.+.... ...++.. +...+.++..+++.+.+
T Consensus 247 --~~~~~~~~~~~d~~~~s~sK~~g--~-~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 321 (467)
T 1ax4_A 247 --KEVIFDMYKYADALTMSAKKDPL--L-NIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE 321 (467)
T ss_dssp --HHHHHHHGGGCSEEEEETTSTTC--C-SSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC
T ss_pred --hhhhhhhccccceEEEeccccCC--C-CcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh
Confidence 0000 123544 6678775 3 54 456666 6 7776554211 1122322 22233333335554433
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE-------EecCCChhhHHHHHHHH-HHCCceecc-C--
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE-------FDKTALPVSAYDICLKM-KERGILAKP-T-- 248 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~-------~~~~~~~~~~~~~~~~l-~~~Gi~~~~-~-- 248 (306)
++..++..++.+++++.|++. .+ ....+..|.++|+. ++. ...+..++++.| .++||.+.+ +
T Consensus 322 ~~~~~~~~~~~~~l~~~L~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~gv~v~~~g~~ 394 (467)
T 1ax4_A 322 EEYLHYRIGQVKYLGDRLREA--GI---PIQYPTGGHAVFVDCKKLVPQIPG--DQFPAQAVINALYLESGVRAVEIGSF 394 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TC---CBCSSCCSSEEEEESTTTCTTSCG--GGCHHHHHHHHHHHHHCEECEEESHH
T ss_pred hhHHHHHHHHHHHHHHHHHhC--CC---CcccCCCceEEEEehhhhcccccc--CCCCHHHHHHHHHHhcCceeeecCcc
Confidence 334555557778888888772 22 11223456677776 321 123467899999 888999876 2
Q ss_pred --------C------CCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893 249 --------H------DTIVRLTPP-LSISSNELQEGSKALHDVLELDLPKM 284 (306)
Q Consensus 249 --------~------~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~~~~~~~ 284 (306)
+ .+++|++++ ..+|++++++++++|+++++ +..+.
T Consensus 395 ~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~-~~~~~ 444 (467)
T 1ax4_A 395 LLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE-KFATL 444 (467)
T ss_dssp HHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH-HHTTC
T ss_pred ccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH-hhhcC
Confidence 1 279999988 44899999999999999998 76543
No 164
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.81 E-value=1.5e-18 Score=160.19 Aligned_cols=229 Identities=17% Similarity=0.114 Sum_probs=145.5
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----------cccccccc-
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----------LARSGRML- 113 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----------~~~~g~~~- 113 (306)
|+++||++|++++ +++++|++++++|++|..+++.+++++|+++|++||++||+|++|.. .+..|...
T Consensus 168 d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~ 247 (467)
T 2oqx_A 168 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIE 247 (467)
T ss_dssp CHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHH
T ss_pred CHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHH
Confidence 8999999998643 46999999999998755777899999999999999999999966542 12223211
Q ss_pred ccc---cCCCCCcEEEecccccCCcccceeeEeCHH----HHhhcCCC----CccCCCCC-CHHHHHHHHHHHHHHhhcc
Q 021893 114 ASD---WEEVRPDMVILGKALGGGVIPVSAVLADKE----VMLCIQPG----EHGSTFGG-NPLASAVAIASLDVIRDEK 181 (306)
Q Consensus 114 ~~~---~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~----~~~~~~~~----~~~~~~~~-~~~~~~aa~~al~~~~~~~ 181 (306)
.+. ....+..+.+++|+++... .|+++++++ .+..+++. ....++.. +..++++...+++...+++
T Consensus 248 ~~~~~~~~~~d~~~~s~sK~~g~~~--Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~ 325 (467)
T 2oqx_A 248 QITRETYKYADMLAMSAKKDAMVPM--GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLD 325 (467)
T ss_dssp HHHHHHGGGCSEEEEESSSTTCCSS--CEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHhhhhhccCCeEEEecccccCCCC--ceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHH
Confidence 010 0111222457889886322 246777655 33333221 01111222 2223222223323222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec--C--CChh-hHHHHHHHH-HHCCceeccCC------
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK--T--ALPV-SAYDICLKM-KERGILAKPTH------ 249 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~--~--~~~~-~~~~~~~~l-~~~Gi~~~~~~------ 249 (306)
..++..++.+++++.|++. .++ . . +..+.++++.+.. . .... ....+++.| .++||.+.|++
T Consensus 326 ~~~~~~~~~~~l~~~L~~~--~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~ 399 (467)
T 2oqx_A 326 WLAYRIAQVQYLVDGLEEI--GVV-C--Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGR 399 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHT--TCC-E--E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCB
T ss_pred HHHHHHHHHHHHHHHHHHC--CCe-e--e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccc
Confidence 4556677888888888876 221 2 2 4567777887642 1 1111 156678888 88899988732
Q ss_pred -----------CCEEEEeCCCC-CCHHHHHHHHHHHHHHHhhhcCC
Q 021893 250 -----------DTIVRLTPPLS-ISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 250 -----------~~~lRi~~~~~-~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
.+++|++++.. ++++++++++++|+++++ +..+
T Consensus 400 ~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~-~~~~ 444 (467)
T 2oqx_A 400 DPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE-NAAN 444 (467)
T ss_dssp CTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHH-SGGG
T ss_pred cccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHh-hhhh
Confidence 27999999888 999999999999999998 7543
No 165
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.81 E-value=4.4e-19 Score=160.56 Aligned_cols=218 Identities=13% Similarity=0.093 Sum_probs=152.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d 123 (306)
.|+++|++.++++ ++++|++++.++ |...+ +++|.++|++||++||+||+|+ ++..+..... ..+ .+|
T Consensus 150 ~d~~~l~~~i~~~--~~~~v~~~~~~~--~~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~~~--~~~~~~d 218 (405)
T 2vi8_A 150 IDYDDVREKARLH--RPKLIVAAAAAY--PRIID----FAKFREIADEVGAYLMVDMAHI-AGLVAAGLHP--NPVPYAH 218 (405)
T ss_dssp BCHHHHHHHHHHH--CCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECTTT-HHHHHTTSSC--CSTTTCS
T ss_pred cCHHHHHHHHHhc--CCeEEEEeCCCC--CccCC----HHHHHHHHHHcCCEEEEEcccc-ccccccCcCC--CccccCC
Confidence 4899999999853 467788765433 33444 9999999999999999999998 2222221111 111 356
Q ss_pred EE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L 197 (306)
++ |+||+++|+. + |++++++++++.+.+......+. .++..++++.++++.+.. ++..++++++++++++.|
T Consensus 219 i~~~s~sK~~~g~~-g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 296 (405)
T 2vi8_A 219 FVTTTTHKTLRGPR-G-GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL 296 (405)
T ss_dssp EEEEESSSTTCCCS-C-EEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCC-C-eEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 55 8899998765 5 99999988887765432222233 355666666677876643 456788888888888888
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCCC----CCCH
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPL----SISS 263 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~----~~t~ 263 (306)
++++ + .+....+.+.++++.++.. +.+..++.+.|.++||.+.++ .++++|++++. .+++
T Consensus 297 ~~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~ 370 (405)
T 2vi8_A 297 QNEG--F--TLVSGGTDNHLLLVDLRPQ--QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGL 370 (405)
T ss_dssp HHTT--C--EEGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCH
T ss_pred HhCC--C--eEecCCCCceEEEEEccCC--CCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCH
Confidence 8762 2 1111123577888887631 135678899999999998863 25689999875 5789
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 021893 264 NELQEGSKALHDVLELDLP 282 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~~ 282 (306)
+++++++++|+++++ ++.
T Consensus 371 ~~i~~~~~~l~~~~~-~~~ 388 (405)
T 2vi8_A 371 EEMDEIAAIIGLVLK-NVG 388 (405)
T ss_dssp HHHHHHHHHHHHHHT-CTT
T ss_pred HHHHHHHHHHHHHHh-ccc
Confidence 999999999999998 664
No 166
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.81 E-value=1.7e-19 Score=169.53 Aligned_cols=228 Identities=14% Similarity=0.156 Sum_probs=141.5
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH--HHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC--SKYNILMIADEIQSGLARSGRMLASDWEEVRP 122 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~--~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~ 122 (306)
.|++.|++.+. +++++|+++.++|++|.+ .+.+.+++|.++| +++|++||+||+|+++......+.....+...
T Consensus 233 ~d~~~l~~~~~---~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i 308 (546)
T 2zy4_A 233 YPDSELDKLKD---PAIKIFFCVNPSNPPSVK-MDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTL 308 (546)
T ss_dssp CCHHHHGGGGS---TTEEEEEEESSCSSSCBC-CCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEE
T ss_pred CCHHHHHHhhC---CCCeEEEEECCCCCCCcc-CCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEE
Confidence 37888887764 578888888889999955 5789999999999 88999999999999875322211111112233
Q ss_pred cEEEeccccc-CCcccceeeEeCHH-HHhhcCC------------------------------------CCccCCCCCCH
Q 021893 123 DMVILGKALG-GGVIPVSAVLADKE-VMLCIQP------------------------------------GEHGSTFGGNP 164 (306)
Q Consensus 123 d~~s~sK~~~-~G~~~~g~~~~~~~-~~~~~~~------------------------------------~~~~~~~~~~~ 164 (306)
.+.||||.++ +|+ |+||++++++ +++.+.. .....+.+.+.
T Consensus 309 ~~~S~SK~~g~~Gl-RiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~ 387 (546)
T 2zy4_A 309 LVYSFSKYFGATGW-RLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLST 387 (546)
T ss_dssp EEEESTTTTTCGGG-CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCH
T ss_pred EEEeCccccCCCCc-ceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCc
Confidence 4569999998 899 9999998775 6665421 00122234455
Q ss_pred HHHHHHH-HHH-HHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecC----CC---------
Q 021893 165 LASAVAI-ASL-DVIRD-EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKT----AL--------- 227 (306)
Q Consensus 165 ~~~~aa~-~al-~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~----~~--------- 227 (306)
+.+.++. .++ ..+.+ +.+. ++..+.++++.+.+...+. +.....+..|.++|+.++.. ..
T Consensus 388 ~~Q~a~a~~a~~all~~~~~~~---~~~r~~~~~r~~~l~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~ 464 (546)
T 2zy4_A 388 PQQVQMALFSLFALMDEADEYK---HTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVK 464 (546)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHH---HHHHHHHHHHHHHHHGGGTSSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHH---HHHHHHHHHHHHHHHHhcCCCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhc
Confidence 5555421 111 22222 2222 2222333333332222211 11112345677778877520 00
Q ss_pred h-hhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 228 P-VSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 228 ~-~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
. .....+.+.+.++||.+.|+ +++++|+++. ..+++++++++++|+++++ ++.
T Consensus 465 ~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~-~~~ 523 (546)
T 2zy4_A 465 QSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMAD-ELY 523 (546)
T ss_dssp HCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHH-HHH
T ss_pred cCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHH-HHH
Confidence 0 02234667778889999985 3578999964 3489999999999999988 654
No 167
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.81 E-value=6.9e-19 Score=160.18 Aligned_cols=219 Identities=15% Similarity=0.114 Sum_probs=142.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++++++. ++++|+++++++ |...+ +++|.++|++||++||+||+|. |+.+.+..+.. ....+..
T Consensus 159 ~d~~~l~~~i~~~--~~~~v~~~~~~~--~~~~~----l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~-~~~~di~ 229 (425)
T 3ecd_A 159 IDYDQVEALAQQH--KPSLIIAGFSAY--PRKLD----FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP-VEHAHVV 229 (425)
T ss_dssp CCHHHHHHHHHHH--CCSEEEEECSCC--CSCCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG-GGTCSEE
T ss_pred cCHHHHHHHHhhc--CCcEEEEccccC--CCcCC----HHHHHHHHHHcCCEEEEECcChHhhhhcccccCc-hhcCcEE
Confidence 3899999999853 567888875444 33445 8999999999999999999975 55444432211 1112223
Q ss_pred EEEecccccCCcccceeeEeC-HHHHhhcCCCCccC-CCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHH
Q 021893 124 MVILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGS-TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLF 198 (306)
Q Consensus 124 ~~s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~ 198 (306)
+.|+||++ +|+ +.||++++ +++.+.+....... ....+...++++..++..... +++.++++++.+++++.|+
T Consensus 230 ~~s~sK~l-~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 307 (425)
T 3ecd_A 230 TSTTHKTL-RGP-RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLK 307 (425)
T ss_dssp EEESSGGG-CCC-SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCccc-CCC-CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 34778999 556 88999987 56666554322221 123344444444445544332 3467788888888888887
Q ss_pred HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC------CCCEEEEeCCCC----CCHH
Q 021893 199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPPLS----ISSN 264 (306)
Q Consensus 199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~------~~~~lRi~~~~~----~t~~ 264 (306)
+.+ + .+......+.++++.+... ..+...+.+.|.++||.+. |+ ..+.+|++++.. .+++
T Consensus 308 ~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e 381 (425)
T 3ecd_A 308 AGG--V--DLVTGGTDNHLLLVDLRPK--GLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAA 381 (425)
T ss_dssp HTT--C--EEGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHH
T ss_pred hCC--C--eeccCCCCceEEEEEeCCC--CCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHH
Confidence 742 1 1111124567778777641 2356778888999999998 43 235799996543 4599
Q ss_pred HHHHHHHHHHHHHhhhc
Q 021893 265 ELQEGSKALHDVLELDL 281 (306)
Q Consensus 265 ~i~~~~~~l~~~l~~~~ 281 (306)
++++++++|+++++ ..
T Consensus 382 ~i~~~~~~l~~~l~-~~ 397 (425)
T 3ecd_A 382 EFREVGRLILEVFE-AL 397 (425)
T ss_dssp HHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHh-cc
Confidence 99999999999998 65
No 168
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.80 E-value=4.7e-19 Score=160.32 Aligned_cols=219 Identities=15% Similarity=0.133 Sum_probs=143.2
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc----CCEEEEehhhhcccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY----NILMIADEIQSGLARSGRMLA 114 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~----gi~li~De~~~g~~~~g~~~~ 114 (306)
+..+|.+| ++|+++++ +++++|++++++|++|.+.+ +++|.++|++| |+++|+||+|+++... ..+
T Consensus 121 v~~v~~~d-~~l~~~i~---~~t~lv~~~~~~nptG~~~~----l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~- 190 (393)
T 1n8p_A 121 TSFTNDLL-NDLPQLIK---ENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL- 190 (393)
T ss_dssp CEEESSHH-HHHHHHSC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG-
T ss_pred EEEeCCCh-HHHHHhcc---cCceEEEEECCCCCcceecC----HHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH-
Confidence 45666667 89998887 57999999999999999988 99999999999 9999999999854322 221
Q ss_pred cccCCCCCcEE--Eeccccc-CCcccc-eeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893 115 SDWEEVRPDMV--ILGKALG-GGVIPV-SAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHL 189 (306)
Q Consensus 115 ~~~~~~~~d~~--s~sK~~~-~G~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~ 189 (306)
.++ .|++ |++|.++ +|+ |+ |+++++ +++++.+...........++..+.++..+++.+.. ..++..++
T Consensus 191 --~~~--~di~~~S~sK~~g~~G~-rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 263 (393)
T 1n8p_A 191 --NFG--ADIVVHSATKYINGHSD-VVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHL--RVRQAALS 263 (393)
T ss_dssp --GGT--CSEEEEETTTTTTCSSC-CCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHH
T ss_pred --HcC--CeEEEEECcccccCCCC-ceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHH--HHHHHHHH
Confidence 123 4554 8889999 587 88 888885 78877765432222233456666655556654322 23444455
Q ss_pred HHHHHHHHHHHHh---h--CCCce---------eeEEE-e-eeEEEEEEecCCChhhHHHHHHHHHHCCceec-------
Q 021893 190 GEELRQHLFKIQQ---Q--FPNYV---------KEVRG-R-GLFNAVEFDKTALPVSAYDICLKMKERGILAK------- 246 (306)
Q Consensus 190 ~~~l~~~L~~~~~---~--~~~~~---------~~~~~-~-g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~------- 246 (306)
.+.+.+.|++... . +|... ...++ . |.++++.++.. ..+...+...|...++.++
T Consensus 264 ~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~--~~~~~~~l~~l~~~~~~~s~G~~~s~ 341 (393)
T 1n8p_A 264 ANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG--AEAASKFASSTRLFTLAESLGGIESL 341 (393)
T ss_dssp HHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCCCSSCE
T ss_pred HHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc--HHHHHHHHhhCCcceECCCCCCCcce
Confidence 5555555544311 0 11000 00012 4 77889888641 2355666666644333321
Q ss_pred ---c---C--------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 247 ---P---T--------------HDTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 247 ---~---~--------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
| . ..+.||++++..+++++++.+.++|+++
T Consensus 342 ~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 342 LEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp EECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1 1 1479999999999999999999888765
No 169
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.80 E-value=7.3e-19 Score=159.77 Aligned_cols=221 Identities=12% Similarity=0.092 Sum_probs=145.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc---ccc----ccC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM---LAS----DWE 118 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~---~~~----~~~ 118 (306)
|++.+.+.++..+++++++++++++|+||. .++++.+++|.++|+++++++|+||+|.+|.+.+.. +.. +..
T Consensus 176 d~~~~~~~l~~~~~~~~vll~~~p~NPtG~-~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
T 4h51_A 176 NFEGMKKDILAAPDGSVFILHQCAHNPTGV-DPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRG 254 (420)
T ss_dssp CHHHHHHHHHHSCSSCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred CHHHHHHHHhccCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhC
Confidence 688888888877778899999999999995 568999999999999999999999999988544321 111 111
Q ss_pred CCCCcEEEeccccc-CCcccceeeEeCHHHHhh-------cCCCCccCCCCCCHHHHHHHHHHHHHH------hh--ccH
Q 021893 119 EVRPDMVILGKALG-GGVIPVSAVLADKEVMLC-------IQPGEHGSTFGGNPLASAVAIASLDVI------RD--EKL 182 (306)
Q Consensus 119 ~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~aa~~al~~~------~~--~~~ 182 (306)
.....+.||||.++ .|+ |+||+++..+..+. +.........+.+..++.++...+..- .. +..
T Consensus 255 ~~~i~~~s~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m 333 (420)
T 4h51_A 255 IEVLLAQSFSKNMGLYSE-RAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAM 333 (420)
T ss_dssp CCCEEEEECTTTSCCGGG-CEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred ceEEEEeccccccccccC-ceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 11223449999999 899 99999875432222 211112233344555555555444321 11 234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCC
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSIS 262 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t 262 (306)
.++++++++.+.+.|++.+... .+....+..|++.++.+. .+.++.|.++||++.+++ ||++. ..+
T Consensus 334 ~~r~~~~R~~l~~~L~~~g~~~-~~~~i~~q~GmF~~~gls--------~e~v~~L~e~~Vy~~~~g----Ris~A-gl~ 399 (420)
T 4h51_A 334 AERIRTMRRTVYDELLRLQTPG-SWEHVINQIGMFSFLGLS--------KAQCEYCQNHNIFITVSG----RANMA-GLT 399 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSS-CCTHHHHCCSSEEECCCC--------HHHHHHHHHTTEECCTTC----EEEGG-GCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCC-CCCeecCCCceEEecCcC--------HHHHHHHHhCCEEEcCCC----EEEec-cCC
Confidence 5566666777777776654221 122234556777665433 234577889999998864 88853 468
Q ss_pred HHHHHHHHHHHHHHHhhhcCC
Q 021893 263 SNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++|++++++|.++++ ++.+
T Consensus 400 ~~ni~~~a~aI~~vvr-~i~r 419 (420)
T 4h51_A 400 HETALMLAQTINDAVR-NVNR 419 (420)
T ss_dssp HHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHH-Hhhc
Confidence 9999999999999999 7664
No 170
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.80 E-value=3.6e-19 Score=158.29 Aligned_cols=214 Identities=11% Similarity=0.061 Sum_probs=138.3
Q ss_pred CHHHHHHHHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCC
Q 021893 46 DITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEE 119 (306)
Q Consensus 46 d~~~le~~i~~~----~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~ 119 (306)
|+++|++.++++ +.++++|+++++ +++|.+. +.+.+++|.++|++||+++|+||+|.+| +..+.. .....
T Consensus 127 d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~ 202 (359)
T 1svv_A 127 RVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY-TKQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLAD 202 (359)
T ss_dssp CHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC-CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHH
T ss_pred cHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec-CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhh
Confidence 699999999863 124889988887 5788654 6899999999999999999999999654 222211 11101
Q ss_pred --CCCcEEE--ecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 120 --VRPDMVI--LGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 120 --~~~d~~s--~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
..+|+++ .+|. ++.. ++|+++.++++++.+.... ....+..+.....+..+.++...-++..++++++++++
T Consensus 203 ~~~~~d~~~~s~~K~-g~~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l 280 (359)
T 1svv_A 203 IARLTDMFYIGATKA-GGMF-GEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAIL 280 (359)
T ss_dssp HHHHCSEEEEECTTT-TCSS-CEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHH
T ss_pred hhhcCCEEEEecccC-CCCC-ceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 1346654 5675 4344 6788988988877665321 12222222222222222222111134567778888888
Q ss_pred HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cceecc---CCCCEEEEeCCCCCCHHHHHHH
Q 021893 194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP---THDTIVRLTPPLSISSNELQEG 269 (306)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~---~~~~~lRi~~~~~~t~~~i~~~ 269 (306)
++.| +.. . .....+..+.++++.++ .++++.|+++ ||.+.+ ...+++|++++..+++++++++
T Consensus 281 ~~~L-~~~-~---~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~ 347 (359)
T 1svv_A 281 KAGL-EAC-G---IRLAWPSASNQLFPILE--------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRF 347 (359)
T ss_dssp HHHH-HHT-T---CCBSSCCSSSEECBEEE--------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHH
T ss_pred HHHh-ccC-C---eEEccCCccceEEEEcC--------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHH
Confidence 8888 431 1 22222334555555543 3788999999 999854 2467999998888999999999
Q ss_pred HHHHHHHHh
Q 021893 270 SKALHDVLE 278 (306)
Q Consensus 270 ~~~l~~~l~ 278 (306)
+++|+++++
T Consensus 348 ~~~l~~~~~ 356 (359)
T 1svv_A 348 VEVLKRLVA 356 (359)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHh
Confidence 999998876
No 171
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.79 E-value=1.8e-18 Score=153.64 Aligned_cols=211 Identities=13% Similarity=0.093 Sum_probs=137.2
Q ss_pred CHHHHHH-HHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--ccccccccccC
Q 021893 46 DITALEK-IFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--RSGRMLASDWE 118 (306)
Q Consensus 46 d~~~le~-~i~~~----~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~~g~~~~~~~~ 118 (306)
|+++|++ +++++ ++++++|+++++++ +|. +++.+.+++|.++|++||++||+|++|..+. ..|.. ....
T Consensus 122 d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~ 197 (356)
T 1v72_A 122 DIVRLRERTREKVGDVHTTQPACVSITQATE-VGS-IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS--PAEM 197 (356)
T ss_dssp CHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSC-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC--TTTT
T ss_pred cHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCc-cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC--HHHh
Confidence 8999999 88741 23689999999764 885 5689999999999999999999999997431 12221 1111
Q ss_pred C--CCCcEE--EecccccCCcccce--eeEeCHHHHhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHH
Q 021893 119 E--VRPDMV--ILGKALGGGVIPVS--AVLADKEVMLCIQPGE-HGSTFGGNPLASAVAIASLDVIRDE---KLAERSAH 188 (306)
Q Consensus 119 ~--~~~d~~--s~sK~~~~G~~~~g--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~ 188 (306)
+ ...|++ ++||. |. |+| ++++++++++.+.... ..+..... +..++..+++.+.++ +..++.++
T Consensus 198 ~~~~~~d~~~~s~sK~---g~-~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~ 271 (356)
T 1v72_A 198 TWKAGVDALSFGATKN---GV-LAAEAIVLFNTSLATEMSYRRKRAGHLSSK--MRFLSAQIDAYLTDDLWLRNARKANA 271 (356)
T ss_dssp TGGGTCCEEEECCGGG---TC-SSCEEEEESSGGGHHHHHHHHHHTTCCCSS--THHHHHHHHHHTSTTHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC---CC-cCccEEEEECHHHHhhHHHHhhccCchhhh--HHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1 134544 67787 33 555 7878888877654321 11211111 122223334444332 23445556
Q ss_pred HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHH
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNEL 266 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i 266 (306)
+.+++++.|+++ ++.....+..+.++++.++ .++++.|.++||.+.++. .+++|++++..++++++
T Consensus 272 ~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~--------~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i 339 (356)
T 1v72_A 272 AAQRLAQGLEGL----GGVEVLGGTEANILFCRLD--------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDV 339 (356)
T ss_dssp HHHHHHHHHTTC----TTEEEESCCCSSEEEEEEC--------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHhhC----CCcEEccCCCccEEEEEcC--------HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHH
Confidence 666666666542 2222222345666776654 268899999999998653 68999999889999999
Q ss_pred HHHHHHHHHHHh
Q 021893 267 QEGSKALHDVLE 278 (306)
Q Consensus 267 ~~~~~~l~~~l~ 278 (306)
++++++|+++++
T Consensus 340 ~~~~~~l~~~l~ 351 (356)
T 1v72_A 340 DHLLNQVRLAAD 351 (356)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHHHHH
Confidence 999999998877
No 172
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.9e-19 Score=164.36 Aligned_cols=221 Identities=10% Similarity=0.070 Sum_probs=151.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-----c--c--ccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-----G--R--MLASD 116 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-----g--~--~~~~~ 116 (306)
|+++|+++++ +++++|+++++++++|.+.+ +++|.++|++||++||+|++|+++... | . .+...
T Consensus 195 d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~ 267 (497)
T 3mc6_A 195 DLGKVKKFIN---KNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFR 267 (497)
T ss_dssp CTTTTGGGCC---SSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTT
T ss_pred CHHHHHHHHh---hCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcccccc
Confidence 6788888887 47899999999999998877 999999999999999999999865332 1 1 12223
Q ss_pred cCCCCCcEE--EecccccCCcccceeeEeCHHHHhhcCCC----CccC-----CC--CCCHHHHHHHHHHHHHHhhc---
Q 021893 117 WEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPG----EHGS-----TF--GGNPLASAVAIASLDVIRDE--- 180 (306)
Q Consensus 117 ~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~----~~~~-----~~--~~~~~~~~aa~~al~~~~~~--- 180 (306)
..+ .|++ +++|.+.++. ++|+++++++.+...... .... ++ +.+....+++.++++.+..+
T Consensus 268 ~~g--~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~ 344 (497)
T 3mc6_A 268 VPG--VTSISCDTHKYGFAPK-GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYI 344 (497)
T ss_dssp STT--CCEEEEETTTTTCCCS-SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC--CcEEEECchhhcCCCC-CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHH
Confidence 334 3555 5569888888 999999877665543211 0111 11 11223344555666665543
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCC
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPL 259 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~ 259 (306)
+..++..++.+++++.|++. .++.....+..+.++.+... ..+..++.+.|.++||.+.... +..+|++++
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~---~~g~~~~~~~~~~~v~~~~~----~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~- 416 (497)
T 3mc6_A 345 ESCQEIVGAAMKFKKYIQEN---IPDLDIMGNPRYSVISFSSK----TLNIHELSDRLSKKGWHFNALQKPVALHMAFT- 416 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHS---CTTCEECSCCCSSEEEEECT----TTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-
T ss_pred HHHHHHHHHHHHHHHHHHhc---CCCEEEecCCCeeEEEEeCC----CCCHHHHHHHHHhCCEEEecCCCCCeEEEEEe-
Confidence 34566777777777777773 11222222244555555433 3467899999999999887653 457899988
Q ss_pred CCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893 260 SISSNELQEGSKALHDVLELDLPKMR 285 (306)
Q Consensus 260 ~~t~~~i~~~~~~l~~~l~~~~~~~~ 285 (306)
.++++++++++++|+++++ ++.+.+
T Consensus 417 ~~t~e~i~~~~~~L~~~l~-~~~~~~ 441 (497)
T 3mc6_A 417 RLSAHVVDEICDILRTTVQ-ELKSES 441 (497)
T ss_dssp TTTTCTHHHHHHHHHHHHH-HHTCC-
T ss_pred CCCHHHHHHHHHHHHHHHH-HHHhCc
Confidence 7799999999999999999 876543
No 173
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.79 E-value=1.4e-18 Score=158.79 Aligned_cols=218 Identities=14% Similarity=0.110 Sum_probs=148.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----------CEEEEehhhhcccccccccc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----------ILMIADEIQSGLARSGRMLA 114 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----------i~li~De~~~g~~~~g~~~~ 114 (306)
.|+++|+++++ +++++|++++++|++|.+.+ +++|.++|+++| +++|+||+|+. +.. .+.
T Consensus 163 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~-~~~--~~~ 232 (432)
T 3a9z_A 163 VEVEDILAAVR---PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQAL-GKR--RVD 232 (432)
T ss_dssp CCHHHHHHTCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTT-TTS--CCC
T ss_pred cCHHHHHHhcc---CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhhh-CCc--ccC
Confidence 37899998887 47999999999999999988 899999999999 99999999963 221 111
Q ss_pred cccCCCCCcEE--EecccccCCcccceeeEeCHHH-HhhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccH
Q 021893 115 SDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEV-MLCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKL 182 (306)
Q Consensus 115 ~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~ 182 (306)
... ..+|++ |++|.+ |. ++||+++++++ ...+.+.. ....++.+..++.++.++++.+.+ ++.
T Consensus 233 ~~~--~~~d~~~~s~~K~~--g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~ 307 (432)
T 3a9z_A 233 VED--LGVDFLTIVGHKFY--GP-RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETY 307 (432)
T ss_dssp HHH--HCCSEEEEEGGGTT--CC-SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhh--cCCCEEEEehhHhc--CC-cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHH
Confidence 111 235554 668976 46 79999998775 34444321 122345677888888788887654 456
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcee-e----EEEeeeEEEEEEecCCChhhHHHHHHHHH----HCCceecc------
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVK-E----VRGRGLFNAVEFDKTALPVSAYDICLKMK----ERGILAKP------ 247 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~-~----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~----~~Gi~~~~------ 247 (306)
.++++++++++.+.|+++... .... . ....+.+.++.+... ..+..++.+.+. +.|+.+.+
T Consensus 308 ~~~~~~~~~~l~~~L~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~ 383 (432)
T 3a9z_A 308 EAHMRDIRDYLEERLEAEFGK--RIHLNSRFPGVERLPNTCNFSIQGS--QLRGYMVLAQCQTLLASVGASCHSDHEDRP 383 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHGG--GEEESSCCTTCCBCTTEEEEEECST--TCCHHHHHHHCSSEECBSSCGGGGGGTTSC
T ss_pred HHHHHHHHHHHHHHHHhccCC--cEEEeCCCCcccCCCCEEEEEeCCC--CCcHHHHHHHhcCeEEeccccccCCCCCCc
Confidence 788888889999998885321 0110 0 123445666766641 123445555442 22333322
Q ss_pred -------C-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 248 -------T-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 248 -------~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+ ..+++|++++..++++|+++++++|+++++ ++.
T Consensus 384 ~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~-~~~ 429 (432)
T 3a9z_A 384 SPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN-QLE 429 (432)
T ss_dssp CHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred cHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence 1 137999999988899999999999999988 654
No 174
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.79 E-value=7.2e-19 Score=159.56 Aligned_cols=247 Identities=15% Similarity=0.115 Sum_probs=155.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||+....|++.+........ .....+..++.+|++++++.++ +++++|++++++|++|.+.+
T Consensus 105 gd~Vl~~~~~y~~~~~~~~~~~~---------~~G~~v~~v~~~d~~~l~~~i~---~~t~~v~~~~p~nptG~~~~--- 169 (403)
T 3cog_A 105 GDQIICMDDVYGGTNRYFRQVAS---------EFGLKISFVDCSKIKLLEAAIT---PETKLVWIETPTNPTQKVID--- 169 (403)
T ss_dssp TCEEEEESSCCHHHHHHHHHTGG---------GGTCEEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---
T ss_pred CCEEEEeCCCcchHHHHHHHHHH---------HcCCEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeeeC---
Confidence 35677777777764432111100 0112245667779999999987 57999999999999999988
Q ss_pred HHHHHHHHHHHcC-CEEEEehhhhcccccccccccccCCCCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCC
Q 021893 82 YLKAVRDLCSKYN-ILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGE 155 (306)
Q Consensus 82 ~l~~i~~l~~~~g-i~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~ 155 (306)
+++|.++|+++| +++|+||+|+++.. ...+ ....|++ |++|.++| |. ++|+++++ +++++.+....
T Consensus 170 -l~~i~~la~~~g~~~livD~~~~~~~~-~~~~-----~~~~div~~S~sK~~~g~~~~-~~G~v~~~~~~l~~~l~~~~ 241 (403)
T 3cog_A 170 -IEGCAHIVHKHGDIILVVDNTFMSPYF-QRPL-----ALGADISMYSATKYMNGHSDV-VMGLVSVNCESLHNRLRFLQ 241 (403)
T ss_dssp -HHHHHHHHTSSSCCEEEEECTTTCTTT-CCTT-----TTTCSEEEEETTTTTTCSSCC-CCEEEEECCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHcCCCEEEEECCCccccc-CCcc-----ccCCeEEEEcChhhccCCCCC-eEEEEEECcHHHHHHHHHHH
Confidence 999999999999 99999999985421 1111 2345655 88999983 45 78999984 78877776433
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH----------hhCCCcee---eEEEeeeEEEEEE
Q 021893 156 HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ----------QQFPNYVK---EVRGRGLFNAVEF 222 (306)
Q Consensus 156 ~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~----------~~~~~~~~---~~~~~g~~~~i~~ 222 (306)
...+...+++.+.++..+++.+.. ..++..++...+.+.+++.. ...|+... ..++.|.++.+.+
T Consensus 242 ~~~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l 319 (403)
T 3cog_A 242 NSLGAVPSPIDCYLCNRGLKTLHV--RMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYI 319 (403)
T ss_dssp HHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEE
T ss_pred HhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEe
Confidence 333445677777777777765422 23334444444555554430 00110100 1124577778777
Q ss_pred ecCCChhhHHHHHHHHHHCCceecc---C---------------------------CCCEEEEeCCCCCCHHHHHHHHHH
Q 021893 223 DKTALPVSAYDICLKMKERGILAKP---T---------------------------HDTIVRLTPPLSISSNELQEGSKA 272 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~~Gi~~~~---~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~ 272 (306)
.. . ..+..+.+.+.|+.+.. + .++++|++++...++++|+.+.+.
T Consensus 320 ~~---~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~a 394 (403)
T 3cog_A 320 KG---T--LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQA 394 (403)
T ss_dssp SS---C--HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred cC---C--HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHH
Confidence 53 1 23455666667774321 1 157999999887777777766666
Q ss_pred HHHHHh
Q 021893 273 LHDVLE 278 (306)
Q Consensus 273 l~~~l~ 278 (306)
|+++++
T Consensus 395 l~~~~~ 400 (403)
T 3cog_A 395 LKAAHP 400 (403)
T ss_dssp HHHHCC
T ss_pred HHHhhc
Confidence 665543
No 175
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.79 E-value=7.7e-19 Score=158.69 Aligned_cols=208 Identities=13% Similarity=0.093 Sum_probs=127.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+. +.. . .+.... +|++
T Consensus 148 d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~--~--~~~~~~-~d~~ 214 (400)
T 3vax_A 148 SVEGVMERLR---PDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQGY-GKV--P--GDLTTP-IDMI 214 (400)
T ss_dssp CHHHHHTTCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTTT-TTS--G--GGGGSC-CSEE
T ss_pred CHHHHHHhcC---CCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhhc-CCC--C--cChhhc-CcEE
Confidence 8999999887 57999999999999999888 99999999999999999999972 111 1 122223 5655
Q ss_pred --EecccccCCcccceeeE-eCHH-HH---hhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 021893 126 --ILGKALGGGVIPVSAVL-ADKE-VM---LCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHL 189 (306)
Q Consensus 126 --s~sK~~~~G~~~~g~~~-~~~~-~~---~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~ 189 (306)
|++|. .|+. ++|+++ ++++ +. ..+.+.. .....+.+..++.++.++++.+.+ ++..++++++
T Consensus 215 ~~s~~K~-~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 292 (400)
T 3vax_A 215 SISGHKI-GAPK-GVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDL 292 (400)
T ss_dssp EEETGGG-TSCS-SCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred EEeHHHh-CCCC-ceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 66694 4444 678777 7652 21 1222221 112334567777777788877654 4566777777
Q ss_pred HHHHHHHHHHHHhhCCCceeeEEE---eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVRG---RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------------- 249 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------- 249 (306)
++++.+.|+ . ++.....+. .+.++++.++ ..+..++.+.|. +||.+.++.
T Consensus 293 ~~~l~~~L~-~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g 362 (400)
T 3vax_A 293 RSRLLAGLA-S----TSFQVNGDQDHVVPHILNLSFE----DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMG 362 (400)
T ss_dssp HHHHHHHHT-T----TTCEECSCTTSBCTTEEEEECT----TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTT
T ss_pred HHHHHHhhC-C----CCEEEeCCcccCCCCEEEEEeC----CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcC
Confidence 777777776 2 112211111 2345666554 245778999999 999888742
Q ss_pred ------CCEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893 250 ------DTIVRLTP-PLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 ------~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+++|+++ +..++++++++++++|+++++
T Consensus 363 ~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 363 LPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp CCHHHHTSEEEEEEEEC-------------------
T ss_pred CCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 48999998 888899999999999998876
No 176
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.79 E-value=8.1e-19 Score=156.16 Aligned_cols=206 Identities=10% Similarity=0.070 Sum_probs=149.0
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc-CCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|+ ++ +++++|++++++|++|.+.+ +++|.++|++| |+++|+|++|+... ... +... .|+
T Consensus 121 d~~~l~--~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~~~~---~~~--~~~~--~d~ 184 (362)
T 3ffr_A 121 YPADIT--VP---ADAEIICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSSLPY---PKF--DWTK--IDS 184 (362)
T ss_dssp CGGGCC--CC---TTCCEEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTTTTS---SCC--CTTS--CSE
T ss_pred CHHHHh--cc---CCccEEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEecccccCC---ccc--ChhH--CcE
Confidence 677777 32 67899999999999999888 99999999999 99999999997321 111 1111 455
Q ss_pred E--EecccccCCcccceeeEeCHHHHhhcCCCCc---------------------cCCCCCCHHHHHHHHHHHHHHhh--
Q 021893 125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH---------------------GSTFGGNPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~aa~~al~~~~~-- 179 (306)
+ +++|.++++. ++|++++++++++.+.+... ...++.+..++.++.++++.+..
T Consensus 185 ~~~s~~K~~~~~~-G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 263 (362)
T 3ffr_A 185 VFFSVQKCFGLPA-GLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQIS 263 (362)
T ss_dssp EEEETTSTTCCCS-CCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEecccccCCCC-ceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHcc
Confidence 4 6679999665 77888899988776543211 11345677777777788887654
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE----EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CC
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV----RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HD 250 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~ 250 (306)
++..++.+++.+++++.|+++ ++..... ...+.++++.++. +..++.+.|.++||.+.++ .+
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~~~~g~~~~~~ 334 (362)
T 3ffr_A 264 ADGIRKQTEEKAALINTYIESS----KVFSFGVEDAKLRSMTTIVANTTM-----LPGEINKILEPFDMAVGAGYGSKKE 334 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEESSSCGGGBCSSEEEEEESS-----CHHHHHHHHGGGTEEEEECSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----cCceeccCChhhcCCceEEEecCC-----CHHHHHHHHHHCCeEEecCccccCC
Confidence 345666777777777777664 1111111 1245666776652 5778999999999999864 46
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 251 TIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+++|++++..++++++++++++|++++
T Consensus 335 ~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 335 TQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 899999998899999999999998764
No 177
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.79 E-value=3.6e-18 Score=157.27 Aligned_cols=230 Identities=15% Similarity=0.079 Sum_probs=145.2
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccC-CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----------cccccccc
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----------LARSGRML 113 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~-~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----------~~~~g~~~ 113 (306)
|+++|+++++++. +++++|++++++| ++|. +.+.+.+++|.++|++||++||+||+|+. +.+.|..+
T Consensus 159 d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~ 237 (456)
T 2ez2_A 159 DLKKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSI 237 (456)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCH
T ss_pred CHHHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcch
Confidence 8999999998642 3358888886666 7884 56899999999999999999999999984 33444322
Q ss_pred c-c-ccCCCCCcEEEec-ccccCCcccceeeEe-CHHHHhhcCCCCc----cCCCC-CCHHHHHH-HHHHHHHHhhccHH
Q 021893 114 A-S-DWEEVRPDMVILG-KALGGGVIPVSAVLA-DKEVMLCIQPGEH----GSTFG-GNPLASAV-AIASLDVIRDEKLA 183 (306)
Q Consensus 114 ~-~-~~~~~~~d~~s~s-K~~~~G~~~~g~~~~-~~~~~~~~~~~~~----~~~~~-~~~~~~~a-a~~al~~~~~~~~~ 183 (306)
. + +..+..+|++++| |.+++.- +.||+++ ++++++.+..... ..++. .+...+.+ +.+.++.+. +++.
T Consensus 238 ~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~ 315 (456)
T 2ez2_A 238 AEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYI 315 (456)
T ss_dssp HHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHH
T ss_pred hhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHH
Confidence 1 0 0112235766554 5454322 5788988 6787766543211 11111 23333333 344443332 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec--C--CChhh-HHHHHHHH-HHCCceeccC---------
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK--T--ALPVS-AYDICLKM-KERGILAKPT--------- 248 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~--~--~~~~~-~~~~~~~l-~~~Gi~~~~~--------- 248 (306)
++.+++.+++++.|++. .+ ....+..+.++++.+.. . ..... ...+++.| .++||.+.+.
T Consensus 316 ~~~~~~~~~l~~~L~~~--g~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~ 390 (456)
T 2ez2_A 316 EHRVKQVRYLGDKLKAA--GV---PIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNN 390 (456)
T ss_dssp HHHHHHHHHHHHHHHHT--TC---CBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCT
T ss_pred HHHHHHHHHHHHHHhcC--CC---ccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCc
Confidence 67777778888888774 12 11123456777777631 1 10111 34457777 5779875431
Q ss_pred --------CCCEEEEeCCCC-CCHHHHHHHHHHHHHHHhhhcCCC
Q 021893 249 --------HDTIVRLTPPLS-ISSNELQEGSKALHDVLELDLPKM 284 (306)
Q Consensus 249 --------~~~~lRi~~~~~-~t~~~i~~~~~~l~~~l~~~~~~~ 284 (306)
..+++|++++.. ++++++++++++|+++++ +..+.
T Consensus 391 ~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~-~~~~~ 434 (456)
T 2ez2_A 391 VTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ-HKEDI 434 (456)
T ss_dssp TTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHH-TGGGC
T ss_pred cccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHh-hhhhc
Confidence 137899998876 899999999999999998 75543
No 178
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.78 E-value=1.5e-18 Score=156.75 Aligned_cols=241 Identities=12% Similarity=0.100 Sum_probs=152.6
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 82 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~ 82 (306)
.+||+...+||+......... . .....+..++..|++++++.++ +++++|++++++|++|.+.+
T Consensus 99 d~vl~~~~~y~~~~~~~~~~~------~---~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---- 162 (389)
T 3acz_A 99 DHLIAGDTLYGCTVSLFTHWL------P---RFGIEVDLIDTSDVEKVKAAWK---PNTKMVYLESPANPTCKVSD---- 162 (389)
T ss_dssp CEEEEESSCCHHHHHHHHHHH------H---HTTCEEEEECTTCHHHHHHTCC---TTEEEEEEESSCTTTCCCCC----
T ss_pred CEEEEeCCCchHHHHHHHHHH------H---HcCCEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----
Confidence 567777777776443221100 0 0011235566679999999887 57999999999999999988
Q ss_pred HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--Eeccccc-CCcccc-eeeEeCH-HHHhhcCCCCcc
Q 021893 83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG-GGVIPV-SAVLADK-EVMLCIQPGEHG 157 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~~~~-g~~~~~~-~~~~~~~~~~~~ 157 (306)
+++|.++|++||+++|+||+|+++. .+..+ +..+|++ |++|+++ +|. |+ |++++++ ++++.++.....
T Consensus 163 l~~i~~~~~~~~~~livD~~~~~~~-~~~~~-----~~~~di~~~S~sK~~~~~~~-~~~G~v~~~~~~~~~~l~~~~~~ 235 (389)
T 3acz_A 163 IKGIAVVCHERGARLVVDATFTSPC-FLKPL-----ELGADIALHSVSKYINGHGD-VIGGVSSAKTAEDIATIKFYRKD 235 (389)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTCTT-TCCGG-----GTTCSEEEEETTTTTTCSSC-CCCEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcccc-ccCcc-----ccCCeEEEECChhhccCCCC-ceeEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999998541 12222 2346665 8889998 466 87 9999988 888777643322
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCC------Cce---eeEEEeeeEEEEEEec
Q 021893 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFP------NYV---KEVRGRGLFNAVEFDK 224 (306)
Q Consensus 158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~------~~~---~~~~~~g~~~~i~~~~ 224 (306)
.....++..+.++..+++.+.. ..++..++.+.+.+.|++... .++ +.. ...++.|.++.+.+..
T Consensus 236 ~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~ 313 (389)
T 3acz_A 236 AGSLMAPMDAFLCARGMKTLPI--RMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS 313 (389)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred cCCCCCHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC
Confidence 2334566666666666654322 234445556666666665310 000 000 0012457778887752
Q ss_pred CCChhhHHHHHHHHHHCCceeccC------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893 225 TALPVSAYDICLKMKERGILAKPT------------------------------HDTIVRLTPPLSISSNELQEGSKALH 274 (306)
Q Consensus 225 ~~~~~~~~~~~~~l~~~Gi~~~~~------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~ 274 (306)
..+..+.+.+.|+.+.+. .++.+|++++.. +++++++.|.
T Consensus 314 ------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~----~~~~li~~l~ 383 (389)
T 3acz_A 314 ------FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE----NVDDIIADLK 383 (389)
T ss_dssp ------HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHH
Confidence 345566666677765441 147999997655 4556666666
Q ss_pred HHHh
Q 021893 275 DVLE 278 (306)
Q Consensus 275 ~~l~ 278 (306)
++++
T Consensus 384 ~al~ 387 (389)
T 3acz_A 384 QALE 387 (389)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6665
No 179
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.78 E-value=1.4e-18 Score=159.14 Aligned_cols=219 Identities=17% Similarity=0.153 Sum_probs=142.8
Q ss_pred cccccCCCHHHHHHHHHhcCCcE-EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGDQI-AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW 117 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~-~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~ 117 (306)
+.+++.+|+++|+++|+. ++ ++|++++++|++|.+.+ +++|.++|++||+++|+|++|+.. .. ...
T Consensus 181 v~~v~~~d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d----l~~I~~la~~~g~~livD~a~~~~----~~--~~~ 247 (445)
T 1qgn_A 181 ATVIDPADVGALELALNQ---KKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFATP----LN--QKA 247 (445)
T ss_dssp EEEECSSCHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCT----TT--CCT
T ss_pred EEEeCCCCHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc----cc--CCc
Confidence 456677799999999984 56 99999999999999988 999999999999999999999732 11 122
Q ss_pred CCCCCcEE--EecccccC-CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893 118 EEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194 (306)
Q Consensus 118 ~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~ 194 (306)
....+|++ |++|.++| |..++|++++++++++.+...........+++.+..+..+++.+.. ..++..++.+.+.
T Consensus 248 ~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~ 325 (445)
T 1qgn_A 248 LALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 325 (445)
T ss_dssp TTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHH
T ss_pred cccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHHHHH--HHHHHHHHHHHHH
Confidence 34456766 57899984 3226999999999888775422222223455555555555554422 1334445566666
Q ss_pred HHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------------
Q 021893 195 QHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------- 248 (306)
Q Consensus 195 ~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------- 248 (306)
+.|++... .+|... ..+++.|.++++.+... ......+.+.|...++.++.+
T Consensus 326 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~--~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~ 403 (445)
T 1qgn_A 326 EILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD--LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMS 403 (445)
T ss_dssp HHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHH
T ss_pred HHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC--HHHHHHHHHhCCCceEeccCCCCceeeecccccc
Confidence 66665310 001000 00124688889988741 133556666665333332211
Q ss_pred --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.++.||++++ .+|++.+++.|+++++
T Consensus 404 h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~ 443 (445)
T 1qgn_A 404 YWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALD 443 (445)
T ss_dssp STTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 2479999965 4689999999999887
No 180
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.78 E-value=1e-18 Score=157.01 Aligned_cols=223 Identities=13% Similarity=0.048 Sum_probs=140.7
Q ss_pred CCHHHHHHHHHhcCCcEEE-EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAG-FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~-v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++. + +++++ |++++++|++|. +...+++|.++|++||+++|+||+|+.+. .+...........+|
T Consensus 129 ~d~~~l~~~-~---~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~d 200 (374)
T 2aeu_A 129 DKVGEILNK-I---DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGARV-RLLFNQPPALKLGAD 200 (374)
T ss_dssp SCHHHHHTT-C---CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHHH-HHHTTCCCHHHHTCS
T ss_pred CCHHHHHhc-C---CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCccccc-ccccccCCccccCCc
Confidence 589999887 3 57888 999999999983 34559999999999999999999997542 111100001112345
Q ss_pred EE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH----HHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL----RQHL 197 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l----~~~L 197 (306)
++ |+||.++ |+ ++||+++++++++.++........+.+++.+.++.++++.+..+ ..++..++.+.+ ++.|
T Consensus 201 i~~~S~sK~l~-g~-~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~l 277 (374)
T 2aeu_A 201 LVVTSTDKLME-GP-RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAKNFDLSKIEKL 277 (374)
T ss_dssp EEEEETTSSSS-SC-SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHCCCHHHHHH
T ss_pred EEEecCccccc-Cc-ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHH
Confidence 44 7899986 47 99999999999887765332233356788888888888765321 233344444444 5555
Q ss_pred HHHHhhC---CCceeeEEEeeeEEEEE-EecCCChh---hHHHHHHHHH-HCCceeccC-----CCCEEEEeCCC-CCCH
Q 021893 198 FKIQQQF---PNYVKEVRGRGLFNAVE-FDKTALPV---SAYDICLKMK-ERGILAKPT-----HDTIVRLTPPL-SISS 263 (306)
Q Consensus 198 ~~~~~~~---~~~~~~~~~~g~~~~i~-~~~~~~~~---~~~~~~~~l~-~~Gi~~~~~-----~~~~lRi~~~~-~~t~ 263 (306)
.+..... ++........|.++++. ... .. ...+++..++ ++||.+.|+ ..+++|++++. ...+
T Consensus 278 ~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~ 354 (374)
T 2aeu_A 278 NKELKAIDDNINIVYERTPTGFVIKRVYKDD---TINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAER 354 (374)
T ss_dssp HHHHTTTCTTEEEEEEECSSEEEEEEEESSH---HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGG
T ss_pred HHhhhhhhhccCcceeeCCceEEEEeecccc---cccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHH
Confidence 5543221 01222334556555442 221 11 1233665554 679999875 24589999753 2223
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 021893 264 NELQEGSKALHDVLELDLP 282 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~~ 282 (306)
.+++.+.+.|+++++ ++.
T Consensus 355 ~~l~~l~~~l~~~l~-~~~ 372 (374)
T 2aeu_A 355 IDDNYIIKAIVESIK-MAF 372 (374)
T ss_dssp SCHHHHHHHHHHHHH-HHT
T ss_pred HHHHHHHHHHHHHHH-HHh
Confidence 348888888888887 654
No 181
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.78 E-value=7.1e-18 Score=153.47 Aligned_cols=208 Identities=14% Similarity=0.108 Sum_probs=138.9
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~ 119 (306)
..++. |+++|+++++ +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|++++..... ..
T Consensus 124 ~~~~~-~~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-----~~ 190 (412)
T 2cb1_A 124 RYVDP-EPEAVREALS---AKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALCRP-----LA 190 (412)
T ss_dssp EEECS-SHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSCCG-----GG
T ss_pred EEECC-CHHHHHHHhc---cCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccCCc-----cc
Confidence 44444 4899999887 57999999999999999887 999999999999999999999854211111 12
Q ss_pred CCCcEE--Eeccccc-CCcccceeeEeCH----------------------------HHHhhcCCCC-ccCCCCCCHHHH
Q 021893 120 VRPDMV--ILGKALG-GGVIPVSAVLADK----------------------------EVMLCIQPGE-HGSTFGGNPLAS 167 (306)
Q Consensus 120 ~~~d~~--s~sK~~~-~G~~~~g~~~~~~----------------------------~~~~~~~~~~-~~~~~~~~~~~~ 167 (306)
...|++ |++|.++ +|. ++|+++..+ ++.+.++... .......++...
T Consensus 191 ~~~di~~~S~~K~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a 269 (412)
T 2cb1_A 191 WGAHVVVESLTKWASGHGS-VLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNA 269 (412)
T ss_dssp GTCSEEEEETTTTTTCSSC-CCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHH
T ss_pred cCCeEEEECCcccccCCCC-cEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHh
Confidence 345655 6889997 576 899877543 2233332211 111223456666
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------EEeeeEEEEEEecCCChh
Q 021893 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNAVEFDKTALPV 229 (306)
Q Consensus 168 ~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~ 229 (306)
..+...++.+. ...++..++.+++.+.|.+.. .+..+ ++.+.++.+.+ .
T Consensus 270 ~~~~~~l~~l~--~~~~~~~~~~~~l~~~L~~~~-----~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~----- 336 (412)
T 2cb1_A 270 YLLFQGLETVA--LRVARMSETARFLAERLQGHP-----KVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G----- 336 (412)
T ss_dssp HHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTCT-----TCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-----
T ss_pred HHHHcCCchHH--HHHHHHHHHHHHHHHHHHcCC-----CeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-----
Confidence 65555555442 234455567777777776531 11112 24567778877 3
Q ss_pred hHHHHHHHHHHCCceeccC------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 230 SAYDICLKMKERGILAKPT------------------------------HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 230 ~~~~~~~~l~~~Gi~~~~~------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
+.+.+.+.|.+.||.+ .. .++.||++++..+++++++.+.+.|++
T Consensus 337 ~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 337 DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 2445667777788886 32 057999999999999999999888764
No 182
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.77 E-value=2.1e-18 Score=153.71 Aligned_cols=217 Identities=12% Similarity=0.026 Sum_probs=142.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--cccccc-ccccCCCCC
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--RSGRML-ASDWEEVRP 122 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~~g~~~-~~~~~~~~~ 122 (306)
|+++|+++ . +++++|++++++|++|..+++.+.+++|.++|++||++||+|++|..+. ..+... ... .+.+.
T Consensus 127 d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~ 201 (359)
T 3pj0_A 127 TIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC-ALFDS 201 (359)
T ss_dssp CHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH-TTCSE
T ss_pred CHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh-ccCCE
Confidence 78898877 3 5788999998887775567789999999999999999999999986321 112111 111 12222
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI 200 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~ 200 (306)
.+.|+||+++++. + |+++.++++++.+.... ............+++..+++... +..++..++++++++.|+++
T Consensus 202 ~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 202 VYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRI--GKMAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp EEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHTS
T ss_pred EEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHhhC
Confidence 2348899998665 5 78889999988775321 11122223333344445555442 23445667777777777664
Q ss_pred HhhCCCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCC---CCCHHHHHHHH
Q 021893 201 QQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPL---SISSNELQEGS 270 (306)
Q Consensus 201 ~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~---~~t~~~i~~~~ 270 (306)
++.... .+..+.++++.++... ..+..++.+.|.++||.+.|+. .+++|+++.. ..+.+++++++
T Consensus 278 ----~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l 352 (359)
T 3pj0_A 278 ----SGVKTVPEVPVSNMFHVYFENSA-DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVF 352 (359)
T ss_dssp ----TTEEEESSSCSSSEEEEEESSCH-HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHH
T ss_pred ----CCceeeccCCcceEEEEEecCcc-chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHH
Confidence 222221 2345666777665311 2346789999999999999862 3578997642 36889999999
Q ss_pred HHHHHH
Q 021893 271 KALHDV 276 (306)
Q Consensus 271 ~~l~~~ 276 (306)
++|.+.
T Consensus 353 ~~l~~~ 358 (359)
T 3pj0_A 353 RCLEKE 358 (359)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998875
No 183
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.77 E-value=4.6e-18 Score=153.97 Aligned_cols=246 Identities=16% Similarity=0.107 Sum_probs=156.9
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+|++...+|++.... ....+-.. .+-|..+.. -..|+++|+++++ +++++|+++ +++|.+.+
T Consensus 103 gd~vl~~~~~~~~~~~~-~~~~g~~~---~~~~~~~~~---~~~d~~~l~~~i~---~~~~~v~~~---n~tG~~~~--- 166 (399)
T 2oga_A 103 GDEVIVPSHTYIASWLA-VSATGATP---VPVEPHEDH---PTLDPLLVEKAIT---PRTRALLPV---HLYGHPAD--- 166 (399)
T ss_dssp TCEEEEESSSCTHHHHH-HHHTTCEE---EEECBCSSS---SSBCHHHHHHHCC---TTEEEECCB---CGGGCCCC---
T ss_pred cCEEEECCCccHHHHHH-HHHCCCEE---EEEecCCCC---CCcCHHHHHHhcC---CCCeEEEEe---CCcCCccC---
Confidence 35788888888774332 22222110 000111100 1248999999987 468887753 45787777
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcc-cccccccccccCCCCCcEEEe----cccccC-CcccceeeEeC-HHHHhhcCCC
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGL-ARSGRMLASDWEEVRPDMVIL----GKALGG-GVIPVSAVLAD-KEVMLCIQPG 154 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~-~~~g~~~~~~~~~~~~d~~s~----sK~~~~-G~~~~g~~~~~-~~~~~~~~~~ 154 (306)
+++|.++|+++|+++|+||+|+.+ ...+.. ++..+|+.++ ||.+++ | +.|+++.+ +++++.+...
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~ 238 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR-----IGAGSSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAERLRML 238 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTEE-----TTCTTCEEEEECCTTSSSCCSS--CCEEEEESCHHHHHHHHHH
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCee-----cccccCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999832 122221 2222466655 599986 6 78888885 7877655431
Q ss_pred Cc------------cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceee-EEEeeeEE--E
Q 021893 155 EH------------GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFN--A 219 (306)
Q Consensus 155 ~~------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~g~~~--~ 219 (306)
.. ..++..+++.++++.++++.+. ++.++.+++.+++++.|+++ ++.... .+..+..+ .
T Consensus 239 ~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~ 312 (399)
T 2oga_A 239 RNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSALAAEYLSGLAGL----PGIGLPVTAPDTDPVWHL 312 (399)
T ss_dssp HBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHTTTC----TTCBCCCCCTTEECCCSS
T ss_pred HhcCccccccccccccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC----CCccccCCCCCCcceeEE
Confidence 11 1223557788887777777653 24556666666666666553 111111 11122222 2
Q ss_pred EEEecCCChhhHHHHHHHHHHCCceeccCCC---------------------------CEEEEeCCCCCCHHHHHHHHHH
Q 021893 220 VEFDKTALPVSAYDICLKMKERGILAKPTHD---------------------------TIVRLTPPLSISSNELQEGSKA 272 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~---------------------------~~lRi~~~~~~t~~~i~~~~~~ 272 (306)
+.+.. .+..++.+.|.++||.+.+... +++|++++..++++|++.++++
T Consensus 313 ~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~ 388 (399)
T 2oga_A 313 FTVRT----ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDA 388 (399)
T ss_dssp EEEEC----SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHH
T ss_pred EEEEC----CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHH
Confidence 33331 2467899999999999986431 5799999999999999999999
Q ss_pred HHHHHhhhcC
Q 021893 273 LHDVLELDLP 282 (306)
Q Consensus 273 l~~~l~~~~~ 282 (306)
|+++++ ++.
T Consensus 389 l~~~~~-~l~ 397 (399)
T 2oga_A 389 VREWAE-RVD 397 (399)
T ss_dssp HHHHHH-SCC
T ss_pred HHHHHH-Hhc
Confidence 999998 654
No 184
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.77 E-value=1e-18 Score=158.24 Aligned_cols=244 Identities=16% Similarity=0.088 Sum_probs=153.5
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG 81 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~ 81 (306)
+.+||+....|||.+..+.... +......+.+++.+|+++|+++++ +++++|++++++|++|.+.+
T Consensus 105 gd~Vi~~~~~y~~~~~~~~~~~--------~~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~G~~~~--- 170 (400)
T 3nmy_A 105 GSHVVAMDDLYGGTFRLFERVR--------RRTAGLDFSFVDLTDPAAFKAAIR---ADTKMVWIETPTNPMLKLVD--- 170 (400)
T ss_dssp TCEEEEESSCCHHHHHHHHHTH--------HHHHCCEEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---
T ss_pred CCEEEEeCCCchHHHHHHHHhh--------HhhcCeEEEEECCCCHHHHHHHhc---cCCCEEEEECCCCCCCeeec---
Confidence 3567777777766543322210 000112346677889999999997 57999999999999999887
Q ss_pred HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-Cccccee--eE-eCHHHHhhcCCCCcc
Q 021893 82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSA--VL-ADKEVMLCIQPGEHG 157 (306)
Q Consensus 82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~--~~-~~~~~~~~~~~~~~~ 157 (306)
+++|.++|++||+++|+||+|+.. ..... ..++.++.+.|++|+++| |. ++|. ++ .++++++.+......
T Consensus 171 -l~~i~~la~~~g~~livDe~~~~~-~~~~~---~~~g~div~~S~sK~l~g~g~-~~gG~~vv~~~~~~~~~l~~~~~~ 244 (400)
T 3nmy_A 171 -IAAIAVIARKHGLLTVVDNTFASP-MLQRP---LSLGADLVVHSATKYLNGHSD-MVGGIAVVGDNAELAEQMAFLQNS 244 (400)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTHH-HHCCG---GGGTCSEEEEETTTTTTCSSS-CCCEEEEECSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHcCCEEEEECCCccc-ccCCh---hhcCCcEEEecCccccCCCCC-cceeEEEEeCCHHHHHHHHHHHHh
Confidence 999999999999999999999731 11111 123445556689999994 45 6654 33 367777776654444
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------EEeeeEEE
Q 021893 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNA 219 (306)
Q Consensus 158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~~g~~~~ 219 (306)
.+...++..+..+...++.+.. ..++..++.+.+.+.|++. | .+..+ ++.|.+++
T Consensus 245 ~g~~~~~~~a~~~l~~l~~l~~--r~~~~~~~a~~l~~~L~~~----p-~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~ 317 (400)
T 3nmy_A 245 IGGVQGPFDSFLALRGLKTLPL--RMRAHCENALALAQWLETH----P-AIEKVIYPGLASHPQHVLAKRQMSGFGGIVS 317 (400)
T ss_dssp HCCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTC----T-TEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred cCCCCCHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHHHHHcC----C-CEeEEECCCCCCCcCHHHHHHhCCCCCceEE
Confidence 4555677777666666655432 2445555666666665542 2 33333 56789999
Q ss_pred EEEecCCChhhHHHHHHHHHHCCceeccC---------------------------CCCEEEEeCCCCCCHHHHHHHHHH
Q 021893 220 VEFDKTALPVSAYDICLKMKERGILAKPT---------------------------HDTIVRLTPPLSISSNELQEGSKA 272 (306)
Q Consensus 220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~ 272 (306)
+.+... ......|.+.|.-.++.++.+ .++.+|++...- +.+.+++.
T Consensus 318 ~~l~~~--~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle----~~~dli~d 391 (400)
T 3nmy_A 318 IVLKGG--FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE----DLGDLRGD 391 (400)
T ss_dssp EEETTH--HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHH
T ss_pred EEeCCc--HHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC----CHHHHHHH
Confidence 998631 123455666654333222211 357899996544 44555566
Q ss_pred HHHHHh
Q 021893 273 LHDVLE 278 (306)
Q Consensus 273 l~~~l~ 278 (306)
|+++++
T Consensus 392 l~~al~ 397 (400)
T 3nmy_A 392 LERALV 397 (400)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 666654
No 185
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.77 E-value=2.3e-17 Score=149.82 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=144.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++++++. ++++|+++++++ |...+ +++|.++|++||++||+||+|. |....+... .... ..|
T Consensus 151 ~d~~~l~~~i~~~--~~~~v~~~~~~~--G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~~--~~d 219 (417)
T 3n0l_A 151 IDYEKVREIAKKE--KPKLIVCGASAY--ARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHP-SPFP--YAH 219 (417)
T ss_dssp CCHHHHHHHHHHH--CCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-CCTT--TCS
T ss_pred cCHHHHHHHHHhc--CCeEEEECCccc--CccCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCC-Cccc--cce
Confidence 4899999999853 567777766553 66766 9999999999999999999975 443333211 1111 235
Q ss_pred EE--EecccccCCcccceeeEeC-HHHHhhcCCCCc-cCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQH 196 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~ 196 (306)
++ |+||++ +|+ +.||++++ +++++.+..... ....+.+...++++..++..... +++.++++++.+++.+.
T Consensus 220 i~~~s~sK~l-~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (417)
T 3n0l_A 220 VVSSTTHKTL-RGP-RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANV 297 (417)
T ss_dssp EEEEESSTTT-CSC-SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCcccc-CCC-CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 55 566999 566 78999998 788777654322 22223455566666666665432 34566777777888888
Q ss_pred HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCCC----CCC
Q 021893 197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPL----SIS 262 (306)
Q Consensus 197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~----~~t 262 (306)
|++.+ + .+......+.++++.+... +.+...+.+.|.++||.+.+. ....+|++++. ..+
T Consensus 298 L~~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~ 371 (417)
T 3n0l_A 298 LMDRK--F--KLVSDGTDNHLVLMSFLDR--EFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFK 371 (417)
T ss_dssp HHHTT--C--EEGGGSCSSSEEEEECTTS--SSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCC
T ss_pred HHhCC--c--eeccCCCCceEEEEEcccC--CCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCC
Confidence 77632 1 1111113345667766531 235678888899999998742 23569998643 257
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 021893 263 SNELQEGSKALHDVLELDL 281 (306)
Q Consensus 263 ~~~i~~~~~~l~~~l~~~~ 281 (306)
++++++++++|+++++ +.
T Consensus 372 ~~~i~~~~~~l~~~l~-~~ 389 (417)
T 3n0l_A 372 EKEMEIVSNYIADILD-DV 389 (417)
T ss_dssp HHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHHh-cc
Confidence 8999999999999998 54
No 186
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.76 E-value=7.6e-18 Score=154.86 Aligned_cols=225 Identities=13% Similarity=0.095 Sum_probs=142.3
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCC
Q 021893 44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRP 122 (306)
Q Consensus 44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~ 122 (306)
..|+++|++++++. ++++++++.++++++. + +++|+++|++||++||+||+|. |+...|.... ...+.+.
T Consensus 171 ~~d~~~l~~~i~~~--~~~~i~~~~~~~~~~~--~----l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~-~~~~~di 241 (447)
T 3h7f_A 171 LIDMDAVRATALEF--RPKVIIAGWSAYPRVL--D----FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS-PVPHADV 241 (447)
T ss_dssp SCCHHHHHHHHHHH--CCSEEEEECSSCCSCC--C----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC-STTTCSE
T ss_pred CcCHHHHHHHHHhc--CCeEEEEcCCCCCCcc--C----HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC-CCCCCcE
Confidence 35899999999753 4567777544444432 4 9999999999999999999984 5544443221 1112222
Q ss_pred cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLF 198 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~ 198 (306)
-+.|+||+++ |+ +.|++++++++++.+........+. .+...++++.+++..... ++..+++.++.+++.+.|+
T Consensus 242 ~~~s~sK~l~-G~-~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 319 (447)
T 3h7f_A 242 VSTTVHKTLG-GG-RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLM 319 (447)
T ss_dssp EEEESSGGGC-CC-SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCcCCC-CC-CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2347889995 67 8899999998877665432222222 233345555555554433 3366778888888888887
Q ss_pred HHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC------CCCEEEEeCCCC----CCH
Q 021893 199 KIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPPLS----ISS 263 (306)
Q Consensus 199 ~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~------~~~~lRi~~~~~----~t~ 263 (306)
+.....++... .....+.++++++... +.....+.+.|.++||.+. |. .++.+|++++.. .++
T Consensus 320 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~ 397 (447)
T 3h7f_A 320 APDVAKAGVSVVSGGTDVHLVLVDLRDS--PLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGD 397 (447)
T ss_dssp SHHHHHTTCEEGGGSCSSSEEEEECTTS--SCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCH
T ss_pred hccccCCCeEEecCCCCCCEEEEEcCCC--CCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCH
Confidence 65111111111 1112455666666431 2345566777777799988 32 356799987543 679
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 021893 264 NELQEGSKALHDVLELDLP 282 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~~~~~ 282 (306)
++++++++.|++++. +..
T Consensus 398 eei~~~~~~l~~~l~-~~~ 415 (447)
T 3h7f_A 398 TEFTEVADIIATALA-TGS 415 (447)
T ss_dssp HHHHHHHHHHHHHHH-SGG
T ss_pred HHHHHHHHHHHHHHh-ccC
Confidence 999999999999998 543
No 187
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.76 E-value=1.2e-17 Score=150.55 Aligned_cols=217 Identities=17% Similarity=0.175 Sum_probs=142.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++.++ +++++|++++ ++|...+ +++|.++|++||+++|+||+|+ |+...+.. ++. .|
T Consensus 115 ~d~~~l~~~l~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~-~d 178 (393)
T 1mdo_A 115 VTPEHIEAAIT---PQTKAIIPVH---YAGAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH-----IGA-RG 178 (393)
T ss_dssp BCHHHHHHHCC---TTEEEECCBC---GGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE-----TTS-SS
T ss_pred CCHHHHHHhcC---CCceEEEEeC---CCCCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCee-----cCC-CC
Confidence 48999999987 4688888865 4677766 9999999999999999999998 44333322 222 56
Q ss_pred EE--Eec--ccccCCcccceeeEeC-HHHHhhcCCCCccC---------------C---------CCCCHHHHHHHHHHH
Q 021893 124 MV--ILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGS---------------T---------FGGNPLASAVAIASL 174 (306)
Q Consensus 124 ~~--s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~---------------~---------~~~~~~~~~aa~~al 174 (306)
++ |++ |.++|| ++|+++.+ +++++.+....... . +..+.+..+++...+
T Consensus 179 ~~~~S~~k~K~l~~~--~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l 256 (393)
T 1mdo_A 179 TAIFSFHAIKNITCA--EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL 256 (393)
T ss_dssp EEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH
T ss_pred eEEEeCCCCCccccc--cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH
Confidence 66 555 888764 78899886 77776554211100 0 223556555555555
Q ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----
Q 021893 175 DVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---- 249 (306)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---- 249 (306)
+.+ ++..++.+++.+++++.|++......... ...+..+.++++.++....+.+..++.+.|.++||.+.++.
T Consensus 257 ~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~ 334 (393)
T 1mdo_A 257 QKL--DALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAH 334 (393)
T ss_dssp HTH--HHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGG
T ss_pred HHH--HHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccc
Confidence 443 23456666677777777765421100000 01234455678877620001356789999999999988742
Q ss_pred ---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 250 ---------------------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 250 ---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
...+|++++..++++|++.++++|+++++ ...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~-~~~ 387 (393)
T 1mdo_A 335 TQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG-QGS 387 (393)
T ss_dssp GSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred cChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHh-cCC
Confidence 23799998888999999999999999988 544
No 188
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.76 E-value=6.3e-18 Score=150.53 Aligned_cols=218 Identities=13% Similarity=0.085 Sum_probs=142.3
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--cccccccc-ccccCCCC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRML-ASDWEEVR 121 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~-~~~~~~~~ 121 (306)
.|+++|+++ .+++++++++++|++|..+++.+.+++|.++|++||++||+||+|.. ....|... ... ...+
T Consensus 125 ~d~~~l~~~-----~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d 198 (357)
T 3lws_A 125 MTLDEIKAL-----PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA-GLFD 198 (357)
T ss_dssp CCHHHHHTC-----CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-TTSS
T ss_pred cCHHHHhcC-----cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-hcCC
Confidence 378888876 13788899988888744667899999999999999999999999861 11122211 111 1122
Q ss_pred CcEEEecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 021893 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK 199 (306)
Q Consensus 122 ~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~ 199 (306)
.-+.|+||++++.. . |++++++++++.+.... ...........++++.++++... +. .++..++++++.+.|++
T Consensus 199 ~~~~s~sK~~~~~~-g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~l~~~L~~ 274 (357)
T 3lws_A 199 SIYISFYKGLGGIA-G-AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRK-DR-MGQYYEQAKQLAEQFNA 274 (357)
T ss_dssp EEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHHHT
T ss_pred EEEEeccccCCCCc-e-EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHh
Confidence 22459999996543 3 88999999888775321 11122223344444556666532 22 34456667777777765
Q ss_pred HHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---C--CEEEEeCCC---CCCHHHHHHHH
Q 021893 200 IQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---D--TIVRLTPPL---SISSNELQEGS 270 (306)
Q Consensus 200 ~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~--~~lRi~~~~---~~t~~~i~~~~ 270 (306)
+ ++... ..+..+.++|+.++... .....++.+.|.++||.+.|+. + .++|+++.. ..+.+++++++
T Consensus 275 ~----~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al 349 (357)
T 3lws_A 275 L----PGVHTTPEVPVSNMFHLHFDGQA-ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGF 349 (357)
T ss_dssp S----TTEEEESSSCSSSEEEEEEESCH-HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHH
T ss_pred C----CCCeeccCCCcceEEEEEecCCh-HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHH
Confidence 4 22222 23456778888887411 1236788999999999999762 2 389998653 36889999999
Q ss_pred HHHHHHH
Q 021893 271 KALHDVL 277 (306)
Q Consensus 271 ~~l~~~l 277 (306)
++|++++
T Consensus 350 ~~l~~al 356 (357)
T 3lws_A 350 ARLRQAF 356 (357)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9998765
No 189
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.75 E-value=2.1e-17 Score=148.91 Aligned_cols=211 Identities=14% Similarity=0.117 Sum_probs=141.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++.|+++++ +++++|+ +++++|.+.+ +++|.++|++||++||+|++|+ |....|.. ...++ ..++
T Consensus 115 d~~~l~~~i~---~~~~~v~---~~n~tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~i~~ 181 (388)
T 1b9h_A 115 DPEAVAAAVT---PRTKVIM---PVHMAGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIAT 181 (388)
T ss_dssp CHHHHHHHCC---TTEEEEC---CBCGGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEE
T ss_pred CHHHHHHhcC---cCceEEE---EeCCccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCee--ccccc-ceEE
Confidence 7999999987 4688777 5566888877 9999999999999999999998 44333332 22333 4567
Q ss_pred EEec--ccccCCcccceeeEeCHH-H--HhhcCCCCc---------------cCCCCCCHHHHHHHHHHHHHHhhccHHH
Q 021893 125 VILG--KALGGGVIPVSAVLADKE-V--MLCIQPGEH---------------GSTFGGNPLASAVAIASLDVIRDEKLAE 184 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~~~-~--~~~~~~~~~---------------~~~~~~~~~~~~aa~~al~~~~~~~~~~ 184 (306)
.||| |.++| . ++|+++++++ + ++.+..... +..+..+.+.++++...++.+. +..+
T Consensus 182 ~S~s~~K~l~g-~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~--~~~~ 257 (388)
T 1b9h_A 182 FSFQNGKLMTA-G-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIA 257 (388)
T ss_dssp EECCTTSSSCS-S-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHH
T ss_pred EEccCCCcccC-C-CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH--HHHH
Confidence 7888 56655 4 7899998765 5 454421100 1112245555555545554432 2456
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCceeeE------EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC--------
Q 021893 185 RSAHLGEELRQHLFKIQQQFPNYVKEV------RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD-------- 250 (306)
Q Consensus 185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~------~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------- 250 (306)
+.+++.+++.+.|+++ ++..... +..+.++++.++... ..+..++.+.|.++||.++++..
T Consensus 258 ~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~ 332 (388)
T 1b9h_A 258 VRDERWTLLSRLLGAI----DGVVPQGGDVRADRNSHYMAMFRIPGLT-EERRNALVDRLVEAGLPAFAAFRAIYRTDAF 332 (388)
T ss_dssp HHHHHHHHHHHHHHTS----TTCEECCCCTTCCBCCCSEEEEECTTCC-HHHHHHHHHHHHHTTCCEEECCCCGGGSHHH
T ss_pred HHHHHHHHHHHHhccC----CCccccCCCcCCCccceEEEEEEeCCcC-cccHHHHHHHHHHCCCCcccccCccccChHh
Confidence 6667777777777653 1122111 234678888776310 13577899999999999875311
Q ss_pred -------------------------CEEEEeCCCCC-CHHHHHHHHHHHHHHHh
Q 021893 251 -------------------------TIVRLTPPLSI-SSNELQEGSKALHDVLE 278 (306)
Q Consensus 251 -------------------------~~lRi~~~~~~-t~~~i~~~~~~l~~~l~ 278 (306)
+.||++++..+ |++|++.+++.|+++++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 333 WELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp HHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHh
Confidence 25899988888 99999999999999876
No 190
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.75 E-value=1.1e-16 Score=149.11 Aligned_cols=225 Identities=12% Similarity=0.088 Sum_probs=144.4
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++|+++|+++ +.++.+|+++.+++++|.+.+ +++|.++|++||+++++|++|+++..... +.....++ .
T Consensus 241 d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~ 315 (497)
T 2qma_A 241 DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVER 315 (497)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGG
T ss_pred CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCccc
Confidence 789999999853 122558888888888998877 99999999999999999999997644333 32223344 5
Q ss_pred CcEEEe--cccccCCcccceeeEeCH-HHHhhcCCCCc----cCCCCCCHHH----------HHHHHHHHHHHhhc---c
Q 021893 122 PDMVIL--GKALGGGVIPVSAVLADK-EVMLCIQPGEH----GSTFGGNPLA----------SAVAIASLDVIRDE---K 181 (306)
Q Consensus 122 ~d~~s~--sK~~~~G~~~~g~~~~~~-~~~~~~~~~~~----~~~~~~~~~~----------~~aa~~al~~~~~~---~ 181 (306)
+|++++ +|++++++ ++|++++++ ..++.+..... ..+...+... ......+++.+..+ +
T Consensus 316 ~D~i~~s~hK~l~~p~-~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~ 394 (497)
T 2qma_A 316 AHSISVDFHKLFYQTI-SCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGD 394 (497)
T ss_dssp CSEEEEETTTTTCCCS-SCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHH
T ss_pred CCEEEEcchhccCCCc-ceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHH
Confidence 677755 79999888 999998864 44454432110 0000011111 11223445544332 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh--hhHHHHHHHHHHCCceecc----CCCCEEEE
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP--VSAYDICLKMKERGILAKP----THDTIVRL 255 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~--~~~~~~~~~l~~~Gi~~~~----~~~~~lRi 255 (306)
..++..++++++.+.|++. ++.....+..+.++.+.+.+.... ....++.+.|.++|+.+.+ .+.+++|+
T Consensus 395 ~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRi 470 (497)
T 2qma_A 395 MYDHLLAQTLEVADMIRTN----DQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKF 470 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTC----TTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhC----CCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEE
Confidence 4566667777777777653 112111123345667766532101 1234678889999988864 23568999
Q ss_pred eC-CCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 256 TP-PLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 256 ~~-~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
++ +..++++|++.++++|+++++ ++
T Consensus 471 s~~~~~~t~edi~~~~~~l~~~~~-~~ 496 (497)
T 2qma_A 471 TILNPCLTTSDFESLLSKINMLAV-EL 496 (497)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred EecCCCCCHHHHHHHHHHHHHHHH-hh
Confidence 97 788999999999999999887 54
No 191
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.74 E-value=1.6e-17 Score=148.77 Aligned_cols=208 Identities=14% Similarity=0.192 Sum_probs=134.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|++.++ +++++|+ +++++|...+ +++|.++|++||+++|+||+|+.+.. +.....+...|++
T Consensus 114 d~~~l~~~~~---~~~~~v~---~~n~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~ 179 (374)
T 3uwc_A 114 DPEKIEAAIT---DKTKAIM---PVHYTGNIAD----MPALAKIAKKHNLHIVEDACQTILGR----INDKFVGSWGQFA 179 (374)
T ss_dssp CGGGTGGGCC---TTEEEEC---CBCGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCE----ETTEETTSSSSEE
T ss_pred CHHHHHHhCC---CCceEEE---EeCCcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCce----eCCeeccccccEE
Confidence 7888888887 4688777 5567888777 99999999999999999999983211 2222333335777
Q ss_pred Eec----ccccC-CcccceeeEeC-HHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH
Q 021893 126 ILG----KALGG-GVIPVSAVLAD-KEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSA 187 (306)
Q Consensus 126 s~s----K~~~~-G~~~~g~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~ 187 (306)
++| |.+++ | ..|+++.+ +++++.+.... ....+..+.+..+++...++.+ +++.++.+
T Consensus 180 ~~s~~~~K~l~~~g--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~--~~~~~~~~ 255 (374)
T 3uwc_A 180 CFSLHPLKNLNVWS--DAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQL--ETITEKRR 255 (374)
T ss_dssp EEECSSSSSSCCSS--CCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGH--HHHHHHHH
T ss_pred EEeCCCCCcCCccc--eeEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHH
Confidence 555 99986 5 36777765 45655443211 1112223444444443333222 33566677
Q ss_pred HHHHHHHHHHHHHHh--hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC--------------
Q 021893 188 HLGEELRQHLFKIQQ--QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD-------------- 250 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~--~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------------- 250 (306)
++.+++++.|+++.. ..+ .... ....+..+.+.. .+..++.+.|.++||.+++..+
T Consensus 256 ~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~ 328 (374)
T 3uwc_A 256 GIAHLYDQSFVDLSEFIDVP---VRREGVYHVFHIYVLRV----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGY 328 (374)
T ss_dssp HHHHHHHHHTGGGTTTEECC---CCCTTEECCCSSEEEEE----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCC
T ss_pred HHHHHHHHHhccCCCeEEec---cCCCCCceeeEEEEEEc----CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCC
Confidence 777777777766531 110 0001 112222222221 2567899999999999887531
Q ss_pred -------------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 251 -------------TIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 251 -------------~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.+|++++..+|++||++++++|+++++
T Consensus 329 ~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 329 QQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp CTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999998
No 192
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.74 E-value=1.3e-17 Score=150.38 Aligned_cols=239 Identities=14% Similarity=0.184 Sum_probs=150.2
Q ss_pred ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC------CCHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF------GDITALEKIFKESGDQIAGFLFEPIQGEAGVI 76 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~ 76 (306)
.+|++...+|++....+...... ++.++. .|++.|+++++ +++++|+++ +++|..
T Consensus 97 d~vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~---n~tG~~ 157 (391)
T 3dr4_A 97 DEVIVPSLTYIASANSVTYCGAT-------------PVLVDNDPRTFNLDAAKLEALIT---PRTKAIMPV---HLYGQI 157 (391)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCE-------------EEEECBCTTTCSBCGGGSGGGCC---TTEEEECCB---CGGGCC
T ss_pred CEEEECCCchHHHHHHHHHCCCE-------------EEEEecCccccCcCHHHHHHhcC---CCceEEEEE---CCCCCh
Confidence 56777777777655443322221 112222 17888888886 478888853 467877
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcEEEec----ccccCCcccceeeEeC-HHHHhh
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLC 150 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~g~~~~~-~~~~~~ 150 (306)
.+ +++|.++|++||+++|+|++|+ |....+.. .+...|+.++| |++++| +.|+++.+ +++++.
T Consensus 158 ~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~~~di~~~S~s~~K~l~~g--~gg~~~~~~~~~~~~ 226 (391)
T 3dr4_A 158 CD----MDPILEVARRHNLLVIEDAAEAVGATYRGKK-----SGSLGDCATFSFFGNAIITTG--EGGMITTNDDDLAAK 226 (391)
T ss_dssp CC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHH
T ss_pred hh----HHHHHHHHHHcCCEEEEECcccccceECCee-----ecccCCEEEEECCCCCcCCcC--CeEEEEECCHHHHHH
Confidence 77 9999999999999999999998 33222221 12223555444 988764 67777775 556544
Q ss_pred cCCCC--------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceee-----E
Q 021893 151 IQPGE--------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-----V 211 (306)
Q Consensus 151 ~~~~~--------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----~ 211 (306)
+.... ....+..+.+..+++...++.+ ++..++.+++.+++++.|+++... .... .
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~ 301 (391)
T 3dr4_A 227 MRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERV--DEHLAARERVVGWYEQKLARLGNR---VTKPHVALTG 301 (391)
T ss_dssp HHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHGGGTTS---EECCCCCTTS
T ss_pred HHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCcc---ccCcCCCCCC
Confidence 43210 1111334455544444444333 345677778888888888776211 1111 1
Q ss_pred EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------------------------CCEEEEeCCCCCCHHHHH
Q 021893 212 RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------------------DTIVRLTPPLSISSNELQ 267 (306)
Q Consensus 212 ~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------------------~~~lRi~~~~~~t~~~i~ 267 (306)
...+.++++.++.. .+.+..++.+.|.++||.++++. .+.+|++++..+|++||+
T Consensus 302 ~~~~~~~~i~~~~~-~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~ 380 (391)
T 3dr4_A 302 RHVFWMYTVRLGEG-LSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADID 380 (391)
T ss_dssp CCCCSSEEEEECSS-CSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred cceeEEEEEEECCc-cchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHH
Confidence 12333456666531 13457889999999999988653 357999999999999999
Q ss_pred HHHHHHHHHH
Q 021893 268 EGSKALHDVL 277 (306)
Q Consensus 268 ~~~~~l~~~l 277 (306)
+++++|++++
T Consensus 381 ~~~~~l~~~l 390 (391)
T 3dr4_A 381 RVIAALDQVL 390 (391)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 193
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.74 E-value=2e-17 Score=147.97 Aligned_cols=212 Identities=15% Similarity=0.173 Sum_probs=136.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|++.++ +++++|+++++ +|.+.+ +++|.++|++||+++|+||+|+... .........++ +.++.
T Consensus 110 d~~~l~~~i~---~~~~~v~~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~-~i~~~ 177 (375)
T 2fnu_A 110 DELALEKLIN---ERTKAIVSVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHALGS-EYQNKKVGGFA-LASVF 177 (375)
T ss_dssp CGGGSGGGCC---TTEEEEEEECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTCTTC-EETTEETTSSS-SEEEE
T ss_pred CHHHHHhhcC---cCceEEEEeCC---cCCccC----HHHHHHHHHHcCCEEEEECccccCC-eECCeeccccC-CeEEE
Confidence 7888888886 46787666554 787777 9999999999999999999998321 11111112222 34566
Q ss_pred Eec--ccccCCcccceeeEe-C-HHHHhhcCCCCc----------------cCCCCCCHHHHHHHHHHHHHHhhccHHHH
Q 021893 126 ILG--KALGGGVIPVSAVLA-D-KEVMLCIQPGEH----------------GSTFGGNPLASAVAIASLDVIRDEKLAER 185 (306)
Q Consensus 126 s~s--K~~~~G~~~~g~~~~-~-~~~~~~~~~~~~----------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~ 185 (306)
|+| |.+++| +|++++ + +++++.+.+... ...+..+.+..+++...++.+ ++..++
T Consensus 178 s~s~~K~~~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~ 252 (375)
T 2fnu_A 178 SFHAIKPITTA---EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQK 252 (375)
T ss_dssp ECCTTSSSCCS---SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHH
T ss_pred eCCCCCCcccc---CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHH
Confidence 888 999654 566666 3 667665543211 111234455544444433322 335666
Q ss_pred HHHHHHHHHHHHHHHHhhCCCceeeE-----EEeeeEEEEEEecCCChh-hHHHHHHHHHHCCceeccC----C------
Q 021893 186 SAHLGEELRQHLFKIQQQFPNYVKEV-----RGRGLFNAVEFDKTALPV-SAYDICLKMKERGILAKPT----H------ 249 (306)
Q Consensus 186 ~~~~~~~l~~~L~~~~~~~~~~~~~~-----~~~g~~~~i~~~~~~~~~-~~~~~~~~l~~~Gi~~~~~----~------ 249 (306)
.+++.+++.+.|+++ ++..... ...+.++++.++.. .. +..++.+.|.++||.+... .
T Consensus 253 ~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~ 326 (375)
T 2fnu_A 253 REEAALTYDRIFKDN----PYFTPLHPLLKDKSSNHLYPILMHQK--FFTCKKLILESLHKRGILAQVHYKPIYQYQLYQ 326 (375)
T ss_dssp HHHHHHHHHHHHTTC----SSEEESGGGCSSCCCCSCEEEEECGG--GGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHH
T ss_pred HHHHHHHHHHHhhcC----CCccccCCCCCCCcceEEEEEEeCcc--ccchHHHHHHHHHHCCCCccccccccccchhhh
Confidence 777777777777663 1111111 12334456666531 12 6778999999999998831 0
Q ss_pred ---------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 250 ---------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 250 ---------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.+++|++++..++++|+++++++|+++++ ++
T Consensus 327 ~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~-~~ 372 (375)
T 2fnu_A 327 QLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE-SF 372 (375)
T ss_dssp HHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred cCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 16899999888999999999999999988 54
No 194
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.74 E-value=9.9e-18 Score=152.94 Aligned_cols=241 Identities=18% Similarity=0.115 Sum_probs=149.3
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccc-cCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV-DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD 80 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~ 80 (306)
+.+||+...+||+.......... .. ...+..+ +.+|+++|+++|+ +++++|++++++|++|.+.+
T Consensus 97 gd~vi~~~~~~~~~~~~~~~~~~----~~-----g~~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~-- 162 (421)
T 2ctz_A 97 GDNIVSTPNLYGGTFNQFKVTLK----RL-----GIEVRFTSREERPEEFLALTD---EKTRAWWVESIGNPALNIPD-- 162 (421)
T ss_dssp TCEEEECSCCCHHHHHHHHTHHH----HT-----TCEEEECCTTCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC--
T ss_pred CCEEEEeCCCchHHHHHHHHHHH----Hc-----CCEEEEECCCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC--
Confidence 45788888888886544321110 00 0123455 6679999999997 57999999999999999888
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeC---HHH----Hhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD---KEV----MLC 150 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~---~~~----~~~ 150 (306)
+++|.++|++||+++|+|++|++++..+..+ +..+|++ |++|++++ |. ++|++++. +++ ++.
T Consensus 163 --l~~i~~~a~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~-~~G~~~~~~~~~~~~~~~~~~ 234 (421)
T 2ctz_A 163 --LEALAQAAREKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGA-VIAGAIVDGGNFPWEGGRYPL 234 (421)
T ss_dssp --HHHHHHHHHHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSC-CCCEEEEECSCSCCTTTTCHH
T ss_pred --HHHHHHHHHHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCC-cEEEEEEeccchhhcccchhh
Confidence 9999999999999999999995454433332 2346766 88899994 76 88877663 122 122
Q ss_pred cCCC---Ccc-----------------------CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Q 021893 151 IQPG---EHG-----------------------STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF 204 (306)
Q Consensus 151 ~~~~---~~~-----------------------~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 204 (306)
+.+. .+. .....+++.+.++...++.+.. ..++..++.+++.+.|++.
T Consensus 235 l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~---- 308 (421)
T 2ctz_A 235 LTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSL--RAERHVENTLHLAHWLLEQ---- 308 (421)
T ss_dssp HHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC----
T ss_pred hccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHhHHHHHHHHHhC----
Confidence 2211 000 1123455655555555554422 2334445666666666553
Q ss_pred CCceeeE-------------------EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------------
Q 021893 205 PNYVKEV-------------------RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------------- 248 (306)
Q Consensus 205 ~~~~~~~-------------------~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------------- 248 (306)
| .+..+ ++.|.++.|.+... ......+.+.+...++.++.+
T Consensus 309 p-~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~--~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~ 385 (421)
T 2ctz_A 309 P-QVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG--YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQL 385 (421)
T ss_dssp T-TEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTH--HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTS
T ss_pred C-CeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCC--HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccC
Confidence 2 22222 35688889988631 123444555554433333211
Q ss_pred ----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 249 ----------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 249 ----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.++.||++++. ++++++++.|++++
T Consensus 386 ~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~al 420 (421)
T 2ctz_A 386 SPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL 420 (421)
T ss_dssp CHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred CHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence 14899999654 57788888887765
No 195
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.74 E-value=6.4e-18 Score=151.52 Aligned_cols=209 Identities=13% Similarity=0.138 Sum_probs=133.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~ 125 (306)
|+++|+++++ +++++|+ +++++|...+ +++|.++|++||+++|+|++|+.. ..+....++...|+.
T Consensus 113 d~~~l~~~l~---~~~~~v~---~~n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~~~d~~ 178 (373)
T 3frk_A 113 DPSLIESAIT---EKTKAII---AVHLYGQPAD----MDEIKRIAKKYNLKLIEDAAQAHG----SLYKGMKVGSLGDAA 178 (373)
T ss_dssp CGGGTGGGCC---TTEEEEE---EECCTTCCCC----HHHHHHHHHHHTCEEEEECTTCTT----CEETTEETTSSSSEE
T ss_pred CHHHHHHhcC---CCCeEEE---EECCCcCccc----HHHHHHHHHHcCCEEEEECCcccC----CEECCEeccccccEE
Confidence 7888988887 4788888 4457888777 999999999999999999999821 112222334335777
Q ss_pred Eec----ccccC-CcccceeeEeC-HHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH
Q 021893 126 ILG----KALGG-GVIPVSAVLAD-KEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSA 187 (306)
Q Consensus 126 s~s----K~~~~-G~~~~g~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~ 187 (306)
++| |.+++ | ..|+++.+ +++++.++... .+..+..+.+..+++...++.+ ++..++.+
T Consensus 179 ~~S~~~~K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~--~~~~~~~~ 254 (373)
T 3frk_A 179 GFSFYPAKNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYL--DKWNEERR 254 (373)
T ss_dssp EEECCTTSSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHH
T ss_pred EEeCcCCCccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHH
Confidence 665 99986 5 46777775 55655443211 1122334555555544444333 33566666
Q ss_pred HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC-----------------
Q 021893 188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD----------------- 250 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~----------------- 250 (306)
++.+++++.|+++....+ .. .......+..+.+.. .+..++.+.|.++||.+++..+
T Consensus 255 ~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 328 (373)
T 3frk_A 255 KIAQKYIAGINNPNVIIP-VE-ADYAKHVWYTFVIRS----EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTG 328 (373)
T ss_dssp HHHHHHHHHCCCTTEECC-CC-CTTEECCCSSEEEEE----SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTT
T ss_pred HHHHHHHHHhccCceEec-cC-CCCCceeeEEEEEEe----CCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCC
Confidence 777777766655421111 00 000112222222221 2467899999999999885421
Q ss_pred ----------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 251 ----------TIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 251 ----------~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.+|++++..+|++|++++++.|+++..
T Consensus 329 ~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 329 NFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp SSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred CCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence 6899999999999999999999987765
No 196
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.73 E-value=8.3e-17 Score=148.31 Aligned_cols=218 Identities=13% Similarity=0.077 Sum_probs=143.2
Q ss_pred CCHHHHHHHH-Hhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCC
Q 021893 45 GDITALEKIF-KES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVR 121 (306)
Q Consensus 45 ~d~~~le~~i-~~~-~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~ 121 (306)
.|+++|+++| +.. ..++.+|+++.+++++|.+.+ +++|.++|+++|+++++|++|+++.. |. ......+...
T Consensus 214 ~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~~~g~~v~vD~A~~~~~~-g~~~~~~~~~~~~ 288 (456)
T 2z67_A 214 VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQNN-YYLEKLKKAFKYR 288 (456)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCH-HHHHHHHHHHTSC
T ss_pred cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCcEEEECcchHHHH-HhhHHHHHhhCCC
Confidence 3899999999 431 136777877888888999988 99999999999999999999975422 11 1111111114
Q ss_pred CcEE--EecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q 021893 122 PDMV--ILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQ 195 (306)
Q Consensus 122 ~d~~--s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~ 195 (306)
+|++ +++|.+++++ ++|++++ ++++++.+.+....... .+ ...++.+++..+.. ++..++..++++++++
T Consensus 289 ~D~~~~s~hK~~~~p~-g~G~l~~~~~~~~~~l~~~~~g~~~-~~--~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~ 364 (456)
T 2z67_A 289 VDAVVSSSDKNLLTPI-GGGLVYSTDAEFIKEISLSYPGRAS-AT--PVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDE 364 (456)
T ss_dssp CSEEEEEHHHHHCCCS-SCEEEEESCHHHHHHHHTTSCSCBC-SH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCcCCCC-CeEEEEEcCHHHHhhcCcCCCCCCC-CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666 5569888888 9999999 57777777543222211 11 13333344444333 4467888899999999
Q ss_pred HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCc---eec------------cCCCCEEEEeCCCC
Q 021893 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI---LAK------------PTHDTIVRLTPPLS 260 (306)
Q Consensus 196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi---~~~------------~~~~~~lRi~~~~~ 260 (306)
.|+++....+..+.... .++++.+... . ...++.+.|.++|+ .+. ....+++|++++..
T Consensus 365 ~L~~~~~~~g~~v~~~~---~~v~~~~~~~--~-~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~ 438 (456)
T 2z67_A 365 LLNDLSKKTGGKFLDVE---SPIASCISVN--S-DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIG 438 (456)
T ss_dssp HHHHHHHHSSCCBCCCC---CSSEEEEECS--S-CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTT
T ss_pred HHHhcccccCCEecCCC---CeEEEEEecc--c-HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcC
Confidence 99887411110111212 4556665211 1 14678999999985 332 22357999999889
Q ss_pred CCHHHHHHHHHHHHHHH
Q 021893 261 ISSNELQEGSKALHDVL 277 (306)
Q Consensus 261 ~t~~~i~~~~~~l~~~l 277 (306)
+|++|+++++++|++++
T Consensus 439 ~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 439 VRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CCHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998654
No 197
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.73 E-value=5.1e-16 Score=140.27 Aligned_cols=218 Identities=14% Similarity=0.166 Sum_probs=141.7
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++.++++++++++|++++ ++|...+ +++|.++|+++|+++|+||+|+ |+.+.+... ..+ ..+|
T Consensus 107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~~-~~~~ 176 (394)
T 1o69_A 107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAK----MDEIVEICKENDIVLIEDAAEALGSFYKNKAL--GTF-GEFG 176 (394)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSS-SSEE
T ss_pred cCHHHHHHHHhcccCCceEEEEEC---CCCChhh----HHHHHHHHHHcCCEEEEECcCcccceeCCccc--ccc-cCcE
Confidence 389999999986433578888876 4676666 9999999999999999999998 654444321 111 1467
Q ss_pred EEEec--ccccCCcccceeeEeC-HHHHhhcCCCCccC-----CC---------CCCHHHHHHHHHHHHHHhhccHHHHH
Q 021893 124 MVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGS-----TF---------GGNPLASAVAIASLDVIRDEKLAERS 186 (306)
Q Consensus 124 ~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~-----~~---------~~~~~~~~aa~~al~~~~~~~~~~~~ 186 (306)
+.++| |.++ |. ++|+++++ +++++.+....... .+ ..+.+..+++...++.+. +..++.
T Consensus 177 ~~s~s~~K~l~-~~-~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~ 252 (394)
T 1o69_A 177 VYSYNGNKIIT-TS-GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKK 252 (394)
T ss_dssp EEECCTTSSSC-CS-SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHH
T ss_pred EEEEeCCccCC-CC-CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHH--HHHHHH
Confidence 88885 6665 55 89999995 78776654311110 01 134455555544454443 256777
Q ss_pred HHHHHHHHHHHHHHHhhCCCceeeEEEeee-EEEEEEecCC------------------ChhhHHHHHHHHHHCCceecc
Q 021893 187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGL-FNAVEFDKTA------------------LPVSAYDICLKMKERGILAKP 247 (306)
Q Consensus 187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~------------------~~~~~~~~~~~l~~~Gi~~~~ 247 (306)
+++.+++++.|+++ ....+.. .....+. ++++.++... .+.+..++.+.|.++||.+++
T Consensus 253 ~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~ 330 (394)
T 1o69_A 253 REIYEWYKEFLGEY-FSFLDEL-ENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRP 330 (394)
T ss_dssp HHHHHHHHHHHTTT-EECCCCC-TTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBC
T ss_pred HHHHHHHHHHhccc-ccccCCC-CCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccc
Confidence 88888888888765 2221000 0001122 3566665210 013577899999999999887
Q ss_pred CCC------------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 248 THD------------------------TIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 248 ~~~------------------------~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
+.. ..+|+..+..+|++|++.+++.|++++.
T Consensus 331 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 331 LWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred cCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 510 3455666778999999999999998887
No 198
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.72 E-value=1.4e-17 Score=151.51 Aligned_cols=222 Identities=9% Similarity=0.000 Sum_probs=140.6
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccc
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASD 116 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~ 116 (306)
+.+++.+|+++|+++|+ +++++|+++.++|++|.+.+ +++|.++|++ +|+++|+|++|+.. .....+
T Consensus 149 v~~v~~~d~~~le~ai~---~~tklV~~e~~~NptG~v~d----l~~I~~la~~~~~g~~livD~a~a~~-~~~~p~--- 217 (415)
T 2fq6_A 149 TSWFDPLIGADIVKHLQ---PNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWAAG-VLFKAL--- 217 (415)
T ss_dssp EEEECTTCGGGGGGGCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTTTT-TSSCGG---
T ss_pred EEEECCCCHHHHHHhhc---cCCcEEEEECCCCCCCEeec----HHHHHHHHHhhcCCCEEEEECCCccc-ccCCcc---
Confidence 35567779999999987 57999999999999999988 9999999999 99999999999732 111111
Q ss_pred cCCCCCcEE--EecccccC-CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 117 WEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 117 ~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
....|++ |++|.+++ |....|++++++++++.+...........++..+..+..+++.+.. ..++..++.+.+
T Consensus 218 --~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~~l~~--r~~~~~~n~~~l 293 (415)
T 2fq6_A 218 --DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGV--RLRQHHESSLKV 293 (415)
T ss_dssp --GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred --ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHH
Confidence 2334555 78899984 4314688999888777665322212223355555555556655432 244555666666
Q ss_pred HHHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec------------c-
Q 021893 194 RQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK------------P- 247 (306)
Q Consensus 194 ~~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~------------~- 247 (306)
++.|++... .+|+.. ....+.|.+++|.++..........|...|.-.++.++ |
T Consensus 294 ~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~ 373 (415)
T 2fq6_A 294 AEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPE 373 (415)
T ss_dssp HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHH
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCC
Confidence 666665410 011100 00123677888888631001345555555432222221 1
Q ss_pred ------------CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 248 ------------THDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 248 ------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
..++.||++++..+++++++.+.+.|++
T Consensus 374 ~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 374 HIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp HHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 1247999999988888888888877764
No 199
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.72 E-value=9e-17 Score=145.95 Aligned_cols=216 Identities=14% Similarity=0.135 Sum_probs=142.6
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|+++++++ ++++|++++++++ ...+ +++|.++|++||++||+||+|+ |+...+... ... . .+|
T Consensus 156 ~d~~~l~~~i~~~--~~~~v~~~~~~~~--~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~-~-~~d 224 (420)
T 3gbx_A 156 IDYDEMAKLAKEH--KPKMIIGGFSAYS--GVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYP-NPV-P-HAH 224 (420)
T ss_dssp CCHHHHHHHHHHH--CCSEEEECCTTCC--SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSC-CST-T-TSS
T ss_pred cCHHHHHHHHHhc--CCeEEEEecCccC--CccC----HHHHHHHHHHcCCEEEEECCcchhceecccCC-ccc-c-cCC
Confidence 5899999999864 4778888654443 3555 9999999999999999999986 554344322 111 1 256
Q ss_pred EE--EecccccCCcccceeeEeCH---HHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH
Q 021893 124 MV--ILGKALGGGVIPVSAVLADK---EVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELR 194 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~ 194 (306)
++ |+||+++ |. +.|++++++ ++++.+......... ..+...++++..++..... +++.++++++.++++
T Consensus 225 i~~~s~sK~~~-g~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 302 (420)
T 3gbx_A 225 VVTTTTHKTLA-GP-RGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMV 302 (420)
T ss_dssp EEEEESSGGGC-SC-SCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecccCCC-CC-CceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Confidence 65 5779997 44 568899887 777666542222222 2334444444445543322 345777888888888
Q ss_pred HHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------C---CCCEEEEeCCCC---
Q 021893 195 QHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------T---HDTIVRLTPPLS--- 260 (306)
Q Consensus 195 ~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~---~~~~lRi~~~~~--- 260 (306)
+.|++.+ ... .....+.++++.+... ......+.+.|.++||.+.+ + .+..+|++++..
T Consensus 303 ~~L~~~g-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~ 375 (420)
T 3gbx_A 303 EVFLNRG-----YKVVSGGTENHLFLLDLVDK--NLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRR 375 (420)
T ss_dssp HHHHHTT-----CEEGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHT
T ss_pred HHHHhcC-----CeeccCCCCCeEEEEEcCCC--CCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhccc
Confidence 8887732 211 1113566777776531 23567788889899999887 2 345699997644
Q ss_pred -CCHHHHHHHHHHHHHHHhhhc
Q 021893 261 -ISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 261 -~t~~~i~~~~~~l~~~l~~~~ 281 (306)
.++++++.++++|+++++ +.
T Consensus 376 ~~~~~~i~~~~~~l~~~l~-~~ 396 (420)
T 3gbx_A 376 GFKEAEVKELAGWMCDVLD-NI 396 (420)
T ss_dssp TCCHHHHHHHHHHHHHHHH-TT
T ss_pred CCCHHHHHHHHHHHHHHHh-Cc
Confidence 568999999999999998 54
No 200
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.72 E-value=1.9e-17 Score=152.19 Aligned_cols=201 Identities=15% Similarity=0.049 Sum_probs=136.1
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCcEEE--ecccccCCc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPDMVI--LGKALGGGV 135 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d~~s--~sK~~~~G~ 135 (306)
++++++++++ .+++|.+.+ +++|.++|++||+++|+||+|++ +...+..+ +.....+|+++ ++|.++++.
T Consensus 145 ~~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~~~~~livDea~~~~~~f~~~~~--~~~~~g~Di~~~S~~K~l~~~~ 217 (446)
T 2x3l_A 145 DGHKLVVLTY-PNYYGETFN----VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPD--STLNYQADYVVQSFHKTLPALT 217 (446)
T ss_dssp --CCEEEEES-SCTTSCCCC----HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCC--CGGGGTCSEEEECHHHHSSSCT
T ss_pred CCceEEEEEC-CCCCeEecC----HHHHHHHHHhcCCeEEEcchhhhhhccCCCCC--ChHHcCCCEEEECCcccccccc
Confidence 4678888888 555898887 99999999999999999999985 22222222 22223457664 559988777
Q ss_pred ccceeeEeCHHHHh--hcCCC-CccCCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893 136 IPVSAVLADKEVML--CIQPG-EHGSTFGGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVK 209 (306)
Q Consensus 136 ~~~g~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 209 (306)
++|++++++++++ .+... ....+.+.+...+++..++++.+...+ +.++.+++.+++++. .+ .+
T Consensus 218 -g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~------g~--~~- 287 (446)
T 2x3l_A 218 -MGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK------GF--EM- 287 (446)
T ss_dssp -TCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH------TC--EE-
T ss_pred -ccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc------CC--EE-
Confidence 8999999877644 22211 112233456666666667777776532 556666666666554 11 11
Q ss_pred eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 210 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 210 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.....+..+++.++ +.+..++.+.|.++||.+...+.+++|++++..++++++ .++++|+++++ .+.
T Consensus 288 ~~~~~~~~l~i~~~----~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~-~~~ 354 (446)
T 2x3l_A 288 LQVDDPLKLLIKYE----GFTGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIED-MIL 354 (446)
T ss_dssp EECSSTTEEEEECT----TSCHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHT-CCC
T ss_pred CcCCCCeEEEEEeC----CcCHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHH-hhc
Confidence 11122345666654 245678999999999999844567999999988899999 99999999998 775
No 201
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.72 E-value=3.3e-18 Score=154.62 Aligned_cols=247 Identities=14% Similarity=0.077 Sum_probs=153.6
Q ss_pred ceEEEEecCCCCcccchhcccCCcc----ccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCCcEEEEEEc
Q 021893 3 AIIVSCCGCFHGRTLAAISMSCDNE----AIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGDQIAGFLFE 67 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~~~~~v~v~ 67 (306)
..|++.+|+.++-...+.++..+.. ..-...|.++. +..++. |.+.++ .+++++|+++
T Consensus 92 ~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~------~~~~k~v~l~ 164 (391)
T 3bwn_A 92 RYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEG-DAWGFD------KKGPYIELVT 164 (391)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEE-ESTTCC------CCSCEEEEEE
T ss_pred CeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecC-CHHHcC------CCCCEEEEEC
Confidence 3688888888887766666544332 22222344433 122222 223332 1468888888
Q ss_pred cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe-CH
Q 021893 68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA-DK 145 (306)
Q Consensus 68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~-~~ 145 (306)
.++|++|.+.. +|++.++.+++++|+||+|.+ . ....+. ...+....+.||||.++ +|+ |+||+++ ++
T Consensus 165 ~p~NPtG~~~~------~l~~~~~~~~~~ii~De~y~~-~-~~~~l~-~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~ 234 (391)
T 3bwn_A 165 SPNNPDGTIRE------TVVNRPDDDEAKVIHDFAYYW-P-HYTPIT-RRQDHDIMLFTFSKITGHAGS-RIGWALVKDK 234 (391)
T ss_dssp SSCTTTCCCCC------CCC-----CCCEEEEECTTCS-T-TTSCCC-CCBCCSEEEEEHHHHHSCGGG-CEEEEEECCH
T ss_pred CCCCCCchhHH------HHHHHhhcCCCEEEEeCCCCC-C-CCCccc-cCCCCeEEEEechhhcCCCcc-ceEEEEecCH
Confidence 88999997752 343322223399999999973 1 111121 12233445669999998 899 9999997 88
Q ss_pred HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---------h---ccHHHHHHHHHHHHHHHHHHHHhhCCCceee---
Q 021893 146 EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---------D---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE--- 210 (306)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---------~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--- 210 (306)
++++.+........++.+.+++.++.++++... + ++..++++++++.+.+.|++. ++....
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p~ 310 (391)
T 3bwn_A 235 EVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKES----DAFTLPKYP 310 (391)
T ss_dssp HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTC----SSEECCCCC
T ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccccCC
Confidence 888877654333346678888888888887642 1 224555566666666666553 111110
Q ss_pred ----------EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 211 ----------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 211 ----------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
.+..|+++|+.+++ ...+.+.|.++||.+.|+ +.+++|+++. .+++++++++++|++
T Consensus 311 ~~~~~f~~~~~~~~g~~~~~~~~~------~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~ 382 (391)
T 3bwn_A 311 EAFCNYFGKSLESYPAFAWLGTKE------ETDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFLERLAN 382 (391)
T ss_dssp CEEETTTTEEECCCCSEEEEEESS------SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHS
T ss_pred ccccccccccCCCcceEEEecCCc------HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHH
Confidence 12345678888763 124566778899999985 2679999954 589999999999987
Q ss_pred HHh
Q 021893 276 VLE 278 (306)
Q Consensus 276 ~l~ 278 (306)
+++
T Consensus 383 ~~~ 385 (391)
T 3bwn_A 383 MKL 385 (391)
T ss_dssp CC-
T ss_pred HHH
Confidence 766
No 202
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.71 E-value=1.5e-15 Score=142.11 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=141.3
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++|+++|++. +.++++|+++.+++++|.+.+ +++|.++|++||+++++|++|+++......+.....++ .
T Consensus 242 d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~ 317 (515)
T 2jis_A 242 VPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQR 317 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCcc
Confidence 799999999852 236899999999999998887 99999999999999999999997544332222223344 6
Q ss_pred CcEEEe--cccccCCcccceeeEeCHH--HHhhc----CCCC-c----------cCCC------CCCHHHHHHHHHHHHH
Q 021893 122 PDMVIL--GKALGGGVIPVSAVLADKE--VMLCI----QPGE-H----------GSTF------GGNPLASAVAIASLDV 176 (306)
Q Consensus 122 ~d~~s~--sK~~~~G~~~~g~~~~~~~--~~~~~----~~~~-~----------~~~~------~~~~~~~~aa~~al~~ 176 (306)
+|++++ +|.+++++ ++|+++++++ +++.+ .+.. . ..++ ....+.+.+++.++..
T Consensus 318 aD~v~~s~hK~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~ 396 (515)
T 2jis_A 318 ADSVAWNPHKLLAAGL-QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGD 396 (515)
T ss_dssp CSEEEECTTSTTCCCS-CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHH
T ss_pred CCEEEECcccccCCCC-CeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhH
Confidence 787766 79998887 8999998765 65541 1111 0 0000 1123444444433322
Q ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE-ecC--C--Chhh--------HHHHHHHHHHCCc
Q 021893 177 IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-DKT--A--LPVS--------AYDICLKMKERGI 243 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~-~~~--~--~~~~--------~~~~~~~l~~~Gi 243 (306)
-.-+++.++..++++++.+.|++. ++.....+.....+.+.. +.. . .... ...+.+.|.++|+
T Consensus 397 ~g~~~~~~~~~~~a~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~ 472 (515)
T 2jis_A 397 QGLERRIDQAFVLARYLVEEMKKR----EGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGS 472 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS----TTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC
Confidence 112345667777777777777664 112111111122233333 210 0 0011 1236778888897
Q ss_pred eecc-----CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893 244 LAKP-----THDTIVRLTP-PLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 244 ~~~~-----~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+.. ...+++|+++ +..+|++|++.++++|+++++
T Consensus 473 ~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 473 MMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp CEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 5522 2246899999 788999999999999998876
No 203
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.71 E-value=1.3e-16 Score=145.46 Aligned_cols=214 Identities=15% Similarity=0.171 Sum_probs=134.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|++.++ +++++|++++ ++|...+ +++|.++|++||+++|+||+|+ |+.+.+..+ ..++ +..+
T Consensus 127 d~~~l~~~i~---~~~~~v~~~~---~tG~~~~----l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~--~~~~-di~~ 193 (424)
T 2po3_A 127 DPDQVAAAVT---PRTSAVVGVH---LWGRPCA----ADQLRKVADEHGLRLYFDAAHALGCAVDGRPA--GSLG-DAEV 193 (424)
T ss_dssp CHHHHGGGCC---TTEEEEEEEC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSSS-SEEE
T ss_pred CHHHHHHhhC---cCCcEEEEEC---CCCCcCC----HHHHHHHHHHcCCEEEEECccccCCeECCeec--cccc-CEEE
Confidence 7899988886 4688888754 5676666 9999999999999999999999 665444322 1111 2233
Q ss_pred EEec--ccccCCcccceeeEeC-HHHHhhcCCCCcc------------CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893 125 VILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHG------------STFGGNPLASAVAIASLDVIRDEKLAERSAHL 189 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~ 189 (306)
.|+| |.+++ . ++||++.+ +++++.+...... ..+..+.+..+++...++.+ +++.++.+++
T Consensus 194 ~S~sk~K~l~~-~-~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~--~~~~~~~~~~ 269 (424)
T 2po3_A 194 FSFHATKAVNA-F-EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAF--PEVIDRNRRN 269 (424)
T ss_dssp EECCTTSSSCC-S-SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred EeCCCCCCccC-C-CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 4666 76666 6 99999998 7877665421110 11123445555444444332 2245555555
Q ss_pred HHHHHHHHHHHHhhCCCceeeE-E-E-e--eeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC--------------
Q 021893 190 GEELRQHLFKIQQQFPNYVKEV-R-G-R--GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD-------------- 250 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~-~-~-~--g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------------- 250 (306)
.+++++.|+++ ++..... + + . ..++++.+++...+.+..++.+.|.++||.+.+...
T Consensus 270 ~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~ 345 (424)
T 2po3_A 270 HAAYREHLADL----PGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPH 345 (424)
T ss_dssp HHHHHHHTCSC----TTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCC
T ss_pred HHHHHHHhccC----CCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCC
Confidence 55555555432 1122111 1 1 1 134556555200012467899999999999986311
Q ss_pred -----------CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893 251 -----------TIVRLTPPLSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 251 -----------~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
..||+.++..++++|+++++++|+++++ ..
T Consensus 346 ~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~-~~ 386 (424)
T 2po3_A 346 APLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT-RG 386 (424)
T ss_dssp CCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred CCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHh-hh
Confidence 1288877789999999999999998886 54
No 204
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.70 E-value=2.1e-15 Score=140.62 Aligned_cols=225 Identities=14% Similarity=0.088 Sum_probs=142.1
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++|+++|++. +.++++|+++.+++++|.+.+ +++|.++|++||+++++|++|+++......+.....++ .
T Consensus 228 d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~ 303 (504)
T 2okj_A 228 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER 303 (504)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG
T ss_pred CHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc
Confidence 899999999852 236899999999999998887 99999999999999999999986533222121222233 5
Q ss_pred CcEEEec--ccccCCcccceeeEeCH-HHHhh-c---CCCCcc-CC----------------CCCCHHHHHHHHHHHHHH
Q 021893 122 PDMVILG--KALGGGVIPVSAVLADK-EVMLC-I---QPGEHG-ST----------------FGGNPLASAVAIASLDVI 177 (306)
Q Consensus 122 ~d~~s~s--K~~~~G~~~~g~~~~~~-~~~~~-~---~~~~~~-~~----------------~~~~~~~~~aa~~al~~~ 177 (306)
+|+++++ |.+++++ ++|++++++ ++++. + .+.... .. .....+.+.+++.++..-
T Consensus 304 ~D~i~~~~hK~~~~p~-~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~ 382 (504)
T 2okj_A 304 ANSVTWNPHKMMGVLL-QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTV 382 (504)
T ss_dssp CSEEEECTTSTTCCCS-CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHH
T ss_pred CCEEEECchhhcCCCc-ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHH
Confidence 6877665 9998777 999999875 45543 1 111100 00 011345555554444321
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHhhCCCceee---EEEeeeEEEEEE-ecC--C---C-------hhhHHHHHHHHHHC
Q 021893 178 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE---VRGRGLFNAVEF-DKT--A---L-------PVSAYDICLKMKER 241 (306)
Q Consensus 178 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~g~~~~i~~-~~~--~---~-------~~~~~~~~~~l~~~ 241 (306)
.-++..++..++++++.+.|++. ++.... .+..+. +.+.. +.. . . .....++.+.|.++
T Consensus 383 g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~p~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 457 (504)
T 2okj_A 383 GFENQINKCLELAEYLYAKIKNR----EEFEMVFNGEPEHTN-VCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES 457 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC----TTEEESSSSCCSSSC-EEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCEEEEecCCCCeEE-EEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC
Confidence 11334556666777777766653 112111 123333 33433 220 0 0 01145788999999
Q ss_pred Cce-ecc--C-C-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893 242 GIL-AKP--T-H-DTIVRLTPP-LSISSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 242 Gi~-~~~--~-~-~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~~~~ 281 (306)
|++ +.+ . + .+++|+++. ..++++|++.++++|+++++ ++
T Consensus 458 G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~-~~ 502 (504)
T 2okj_A 458 GTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ-DL 502 (504)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHT-C-
T ss_pred CcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 954 332 1 2 258999985 77899999999999999887 54
No 205
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.70 E-value=1.7e-16 Score=141.22 Aligned_cols=208 Identities=14% Similarity=0.070 Sum_probs=143.0
Q ss_pred CCHHHHHH-HHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893 45 GDITALEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~-~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++ +++ +++++|++++++|++|.+.+ +++++||+++|+||+|+.+... +.... ++.-
T Consensus 128 ~d~~~l~~~~i~---~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~---~~~~~--~di~ 190 (360)
T 1w23_A 128 QSIPDFSEFQLN---ENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP---LKVNQ--FGMI 190 (360)
T ss_dssp CSCCCGGGCCCC---TTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC---CCGGG--CSEE
T ss_pred CCccchHhhccC---CCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCCCC---cCccc--CCEE
Confidence 36777777 664 57999999999999997753 2233899999999999843211 11222 2223
Q ss_pred EEEecccccCCcccceeeEeCHHHHhhcCCCCc-----------cCC-CCCCHHHHHHHHHHHHHHhhc----cHHHHHH
Q 021893 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------GST-FGGNPLASAVAIASLDVIRDE----KLAERSA 187 (306)
Q Consensus 124 ~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~aa~~al~~~~~~----~~~~~~~ 187 (306)
+.++||.++ .. ++||+++++++++.+.+... ... .+.+..++.++.++++.+.+. +..++++
T Consensus 191 ~~s~sK~~~-~~-G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 268 (360)
T 1w23_A 191 YAGAQKNLG-PS-GVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNE 268 (360)
T ss_dssp EEETTTTTS-CT-TCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred EEEcccccC-CC-CcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 346779987 33 58999999998877765321 111 234666777777788776542 3566677
Q ss_pred HHHHHHHHHHHHHHhhCCCc-eee-EE--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCC
Q 021893 188 HLGEELRQHLFKIQQQFPNY-VKE-VR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSI 261 (306)
Q Consensus 188 ~~~~~l~~~L~~~~~~~~~~-~~~-~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~ 261 (306)
++++++.+.|+++. +. ... .+ ..+.++++.++. ..+..++.+.|.++||.+.++. .+++|++++..+
T Consensus 269 ~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~ 341 (360)
T 1w23_A 269 EKAKIIYDTIDESN----GFYVGHAEKGSRSLMNVTFNLRN---EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAV 341 (360)
T ss_dssp HHHHHHHHHHHTTT----TSSEESSCGGGBCSSEEEEECSS---HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS
T ss_pred HHHHHHHHHHHHcc----CcccccCCchhccCcEEEEEcCC---CccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCC
Confidence 77777777776542 11 111 02 234578887763 3456788999999999998763 478999998888
Q ss_pred CHHHHHHHHHHHHHHHh
Q 021893 262 SSNELQEGSKALHDVLE 278 (306)
Q Consensus 262 t~~~i~~~~~~l~~~l~ 278 (306)
+++++++++++|+++++
T Consensus 342 ~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 342 PIDACIALRELMIQFKE 358 (360)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999998876
No 206
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.70 E-value=3.4e-15 Score=137.36 Aligned_cols=230 Identities=13% Similarity=0.048 Sum_probs=147.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc------CCEEEEehhhhcccc--ccccccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR--SGRMLASDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~------gi~li~De~~~g~~~--~g~~~~~~~ 117 (306)
|+++|+++|+ +++++|+++.+++++|.+.+ +++|.++|++| |+++++|++|+++.. .......+.
T Consensus 176 d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 248 (452)
T 2dgk_A 176 DPKRMIEACD---ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF 248 (452)
T ss_dssp CHHHHHHHCC---TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST
T ss_pred CHHHHHHHHh---hCCEEEEEEcCCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc
Confidence 7999999997 46899999999999999988 99999999996 999999999986532 011111111
Q ss_pred CCCCCcEEEe--cccccCCcccceeeEeCH-HHH-hhcCC--CCcc-------CCCCCCHHHHHHHHHHHHHHhhc---c
Q 021893 118 EEVRPDMVIL--GKALGGGVIPVSAVLADK-EVM-LCIQP--GEHG-------STFGGNPLASAVAIASLDVIRDE---K 181 (306)
Q Consensus 118 ~~~~~d~~s~--sK~~~~G~~~~g~~~~~~-~~~-~~~~~--~~~~-------~~~~~~~~~~~aa~~al~~~~~~---~ 181 (306)
.-...|.+++ .|.+.+|+ ++|++++++ +.+ +.+.. .... ..++.+.....+..++++.+..+ +
T Consensus 249 ~~~~~d~~~~~~hK~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~ 327 (452)
T 2dgk_A 249 RLPRVKSISASGHKFGLAPL-GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTK 327 (452)
T ss_dssp TSTTEEEEEEETTTTTCCCS-SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEECcccccCCCC-CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHH
Confidence 0114565554 49776888 999999864 333 43321 1100 01112222333444455544433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEE----EeeeEEEEEEecCC-ChhhHHHHHHHHHHCCceec----cC---C
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVR----GRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAK----PT---H 249 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~----~~---~ 249 (306)
..++..++++++.+.|++.. +.....+ ....++.+.++... ...+..++.+.|.++|+.+. |. +
T Consensus 328 ~~~~~~~~a~~l~~~L~~~~----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~ 403 (452)
T 2dgk_A 328 VQNASYQVAAYLADEIAKLG----PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATD 403 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTS----SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTT
T ss_pred HHHHHHHHHHHHHHHHHhCC----CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCC
Confidence 45566666666666666541 1222222 24456666665311 01245789999999998654 22 2
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 021893 250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPK 288 (306)
Q Consensus 250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~~~~ 288 (306)
.+++|+++...+|+++++.+++.|+++++ .+.+.+...
T Consensus 404 ~~~lRis~~~~~t~e~id~li~~l~~~~~-~~~~~~~~~ 441 (452)
T 2dgk_A 404 IVVMRIMCRRGFEMDFAELLLEDYKASLK-YLSDHPKLQ 441 (452)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHHCGGGT
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHHHH-HHHhCCCCC
Confidence 45899999888899999999999999998 776554333
No 207
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.70 E-value=1.3e-16 Score=144.21 Aligned_cols=198 Identities=11% Similarity=0.091 Sum_probs=138.7
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVI 136 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~ 136 (306)
+++++|++++++|++|.+.+ +++|.++ +|+++|+||+|+.+.. .+... + .|++ +++|.++++.
T Consensus 164 ~~~~~v~~~~~~nptG~~~~----~~~i~~~---~~~~vivD~a~~~~~~---~~~~~--~--~di~~~s~sK~~~~~g- 228 (398)
T 2fyf_A 164 PSVDVIAWAHNETSTGVAVA----VRRPEGS---DDALVVIDATSGAGGL---PVDIA--E--TDAYYFAPQKNFASDG- 228 (398)
T ss_dssp TTCSEEEEESEETTTTEECC----CCCCTTC---C-CEEEEECTTTTTTS---CCCGG--G--CSEEEECTTSTTCSCS-
T ss_pred CCCCEEEEeCcCCCcceecc----hHHhhhh---cCCeEEEEeccccCCc---ccCcc--c--CcEEEEecCcccCCCC-
Confidence 56889998899999998877 5555555 8999999999984321 11111 2 4655 5569999665
Q ss_pred cceeeEeCHHHHhhcCC----------CC-----------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q 021893 137 PVSAVLADKEVMLCIQP----------GE-----------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGE 191 (306)
Q Consensus 137 ~~g~~~~~~~~~~~~~~----------~~-----------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~ 191 (306)
++||+++++++++.++. .. ....++.+..++.++.++++.+.+. +..++.+++++
T Consensus 229 g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 308 (398)
T 2fyf_A 229 GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ 308 (398)
T ss_dssp SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred ceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 78999999998776521 00 1112345666777777888776543 35667777777
Q ss_pred HHHHHHHHHHhhCCCceeeE--E--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCH
Q 021893 192 ELRQHLFKIQQQFPNYVKEV--R--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISS 263 (306)
Q Consensus 192 ~l~~~L~~~~~~~~~~~~~~--~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~ 263 (306)
++.+.|+++. +..... + ..+.++++.+++ +.+..++++.|.++||.+.++ +.+++|++++..+++
T Consensus 309 ~l~~~L~~~~----g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~ 381 (398)
T 2fyf_A 309 RLYSWAQERP----YTTPFVTDPGLRSQVVGTIDFVD---DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEP 381 (398)
T ss_dssp HHHHHHHHST----TEEESCCSGGGBCSSEEEEEECT---TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCH
T ss_pred HHHHHHHHcC----CceeccCChhhcCCcEEEEECCC---CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCH
Confidence 7777777641 122111 2 234477887763 346788999999999999864 257999999888899
Q ss_pred HHHHHHHHHHHHHHh
Q 021893 264 NELQEGSKALHDVLE 278 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~ 278 (306)
+|+++++++|+++++
T Consensus 382 e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 382 DDVSALTECVDWVVE 396 (398)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999887
No 208
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.69 E-value=1.9e-16 Score=141.73 Aligned_cols=206 Identities=18% Similarity=0.189 Sum_probs=138.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|+++++ +++++|++ ++++|...+ +++|.++|++||++||+|++|+ |....+... ..++ |+
T Consensus 112 d~~~l~~~i~---~~~~~v~~---~~~~G~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~--~~~~---di 176 (367)
T 3nyt_A 112 DPQLLEAAIT---PRTKAIIP---VSLYGQCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGKRS--CNLS---TV 176 (367)
T ss_dssp CGGGTGGGCC---TTEEEECC---BCGGGCCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTEET--TSSS---SE
T ss_pred CHHHHHHhcC---cCCcEEEe---eCCccChhh----HHHHHHHHHHcCCEEEEECccccCCeECCeec--cCCC---CE
Confidence 7888998886 57888883 345677777 9999999999999999999997 443333322 2222 66
Q ss_pred EEec----ccccC-CcccceeeEe-CHHHHhhcCCCCc------------cCCCCCCHHHHHHHHHHHHHHhhccHHHHH
Q 021893 125 VILG----KALGG-GVIPVSAVLA-DKEVMLCIQPGEH------------GSTFGGNPLASAVAIASLDVIRDEKLAERS 186 (306)
Q Consensus 125 ~s~s----K~~~~-G~~~~g~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~~ 186 (306)
.++| |.+++ |. .|+++. ++++++.++.... +.++..+.+.++++...++.+ ++..++.
T Consensus 177 ~~~Sf~~~K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~ 252 (367)
T 3nyt_A 177 ACTSFFPSAPLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIF--EEEIALR 252 (367)
T ss_dssp EEEECCTTSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHH
T ss_pred EEEECCCCCcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHH--HHHHHHH
Confidence 6554 99987 64 677777 4777665543211 234566778877777777655 3356777
Q ss_pred HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------
Q 021893 187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------------- 249 (306)
Q Consensus 187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------- 249 (306)
+++.+++++.|++.....+............+.+.++ +..++.+.|.++||.+++..
T Consensus 253 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~ 326 (367)
T 3nyt_A 253 QKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD------NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKL 326 (367)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS------SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCC
T ss_pred HHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC------CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCC
Confidence 8888888888887632221000011111222333222 46789999999999887432
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 250 -------DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 250 -------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
...+|+.++..+|++|++++++.|+++
T Consensus 327 ~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 327 PVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred hHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 257899988999999999999988765
No 209
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.69 E-value=1.4e-16 Score=145.45 Aligned_cols=213 Identities=18% Similarity=0.176 Sum_probs=135.0
Q ss_pred cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893 39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
+..++.+|+++|+++++ +++++|++++++|++|.+.+ +++|.++|+++|+++|+|++|+. +.......+
T Consensus 149 ~~~v~~~d~~~l~~ai~---~~t~~v~~e~p~NptG~~~d----l~~i~~la~~~g~~livD~a~~~----~~~~~~~~~ 217 (430)
T 3ri6_A 149 VRFVDVMDSLAVEHACD---ETTKLLFLETISNPQLQVAD----LEALSKVVHAKGIPLVVDTTMTP----PYLLEAKRL 217 (430)
T ss_dssp EEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTSC----TTTCCGGGG
T ss_pred EEEeCCCCHHHHHHhhC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc----cccCChHHc
Confidence 46677789999999997 57999999999999999988 99999999999999999999972 121222234
Q ss_pred CCCCcEEEecccccC-Ccccce-eeEeC-H-HH------------------HhhcCC-CCccCCCCCCHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG-GVIPVS-AVLAD-K-EV------------------MLCIQP-GEHGSTFGGNPLASAVAIASLD 175 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~-G~~~~g-~~~~~-~-~~------------------~~~~~~-~~~~~~~~~~~~~~~aa~~al~ 175 (306)
+.+..+.|++|.++| |. .+| +++.+ + .. +...+. .........++..+..+...++
T Consensus 218 g~div~~S~sK~l~g~g~-~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~ 296 (430)
T 3ri6_A 218 GVDIEVLSSTKFISGGGT-SVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLE 296 (430)
T ss_dssp TCSEEEEECCCEEETTEE-ECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEECCcccccCCCC-ceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 555556688999985 44 444 44422 2 11 111111 0011122345565555556665
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-----------------Eeee-EEEEEEecCCChhhHHHHHHH
Q 021893 176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-----------------GRGL-FNAVEFDKTALPVSAYDICLK 237 (306)
Q Consensus 176 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-----------------~~g~-~~~i~~~~~~~~~~~~~~~~~ 237 (306)
.+.. ..++..++...+.+.|++. | .+..+. +.|. +++|.++. ......|.+.
T Consensus 297 ~l~~--r~~~~~~na~~la~~L~~~----p-~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~---~~~~~~~~~~ 366 (430)
T 3ri6_A 297 TMAL--RIERSCQNAQELAHWLLSI----P-QVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES---KEASYRFMDA 366 (430)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHTTC----T-TCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---HHHHHHHHHH
T ss_pred hHHH--HHHHHHHHHHHHHHHHhCC----C-CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC---HHHHHHHHHh
Confidence 5533 2445556666666666543 2 222222 2366 99999873 4566677777
Q ss_pred HHHCCceeccC---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893 238 MKERGILAKPT---------------------------HDTIVRLTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 238 l~~~Gi~~~~~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l 277 (306)
|.-.++.++++ .++.||+++. .|+.+.+++.|++++
T Consensus 367 l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG----~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 367 LKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG----IEEIEDLKEDILQAL 429 (430)
T ss_dssp CSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred CCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHhh
Confidence 76555444321 3578999953 356677777777765
No 210
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.67 E-value=4.7e-16 Score=144.27 Aligned_cols=215 Identities=17% Similarity=0.145 Sum_probs=142.4
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 123 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d 123 (306)
.|+++|++++++. ++++|++ .+++++ .+.+ +++|+++|+++|++|++|++|. |+...|... .... ..|
T Consensus 180 iD~d~le~~i~~~--~tklIi~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~-~p~~--~~d 248 (483)
T 1rv3_A 180 IDYDRLEENARLF--HPKLIIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVVP-SPFE--HCH 248 (483)
T ss_dssp BCHHHHHHHHHHH--CCSEEEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSC-CGGG--TCS
T ss_pred CCHHHHHHHHhhc--CCcEEEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCCC-CCCC--CCc
Confidence 3899999999853 5778888 666666 5666 9999999999999999999987 543333211 1111 245
Q ss_pred EE--EecccccCCcccceeeEeCHHH---------------HhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhh---ccH
Q 021893 124 MV--ILGKALGGGVIPVSAVLADKEV---------------MLCIQPGE-HGSTFGGNPLASAVAIASLDVIRD---EKL 182 (306)
Q Consensus 124 ~~--s~sK~~~~G~~~~g~~~~~~~~---------------~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~---~~~ 182 (306)
++ |++|+++ |+ +.|++++++++ .+.+.... .....+.+...+++..++++.+.+ +++
T Consensus 249 iv~~s~~K~l~-Gp-rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~ 326 (483)
T 1rv3_A 249 VVTTTTHKTLR-GC-RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEY 326 (483)
T ss_dssp EEEEESSGGGC-CC-SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred EEEecCcccCC-CC-CceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHH
Confidence 55 6669995 55 77999987642 22221100 111222344455555667776643 446
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----CCCE
Q 021893 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----HDTI 252 (306)
Q Consensus 183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----~~~~ 252 (306)
.+++.++++++.+.|++.+ .....++ ...+.++.+... +.+..++.+.|.+.||.+. |+ +++.
T Consensus 327 ~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~v~~~~~--g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~ 399 (483)
T 1rv3_A 327 QRQVVANCRALSAALVELG-----YKIVTGGSDNHLILVDLRSK--GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSG 399 (483)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----CEEGGGSCSSSEEEEEGGGG--TCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCE
T ss_pred HHHHHHHHHHHHHHHHhcC-----CEeccCCCCCceEEEeccCC--CCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCce
Confidence 7778888888888887752 1111122 224566666531 2356778888889999998 64 3578
Q ss_pred EEEeCCCCCC----HHHHHHHHHHHHHHHhhh
Q 021893 253 VRLTPPLSIS----SNELQEGSKALHDVLELD 280 (306)
Q Consensus 253 lRi~~~~~~t----~~~i~~~~~~l~~~l~~~ 280 (306)
+|++++..++ ++|+++++++|+++++ .
T Consensus 400 iRis~~~~~t~g~~~edi~~~~~~l~~~l~-~ 430 (483)
T 1rv3_A 400 LRLGTPALTSRGLLEKDFQKVAHFIHRGIE-L 430 (483)
T ss_dssp EEEECHHHHHTTCCHHHHHHHHHHHHHHHH-H
T ss_pred EEeecCCcccCCCCHHHHHHHHHHHHHHHH-h
Confidence 9999876556 9999999999999988 5
No 211
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.67 E-value=3.3e-15 Score=139.18 Aligned_cols=229 Identities=14% Similarity=0.046 Sum_probs=148.5
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc------CCEEEEehhhhcccc--ccccccccc
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR--SGRMLASDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~------gi~li~De~~~g~~~--~g~~~~~~~ 117 (306)
|+++|+++|+ +++++|+++.+++++|.+.+ +++|.++|+++ |+++++|++|+++.. .......+.
T Consensus 191 d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~ 263 (502)
T 3hbx_A 191 DPQQAVDMVD---ENTICVAAILGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF 263 (502)
T ss_dssp CHHHHHHHCC---TTEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST
T ss_pred CHHHHHHHHh---hCCEEEEEecCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc
Confidence 7999999988 46889999999999999988 99999999999 999999999986531 011111111
Q ss_pred CCCCCcEEE--ecccccCCcccceeeEeC-HHHHh-hcCC--CCcc-------CCCCCCHHHHHHHHHHHHHHhhc---c
Q 021893 118 EEVRPDMVI--LGKALGGGVIPVSAVLAD-KEVML-CIQP--GEHG-------STFGGNPLASAVAIASLDVIRDE---K 181 (306)
Q Consensus 118 ~~~~~d~~s--~sK~~~~G~~~~g~~~~~-~~~~~-~~~~--~~~~-------~~~~~~~~~~~aa~~al~~~~~~---~ 181 (306)
.....|.++ ..|.+.++. ++|+++.+ ++.+. .+.. .... ..++.+.....+..++++.+..+ +
T Consensus 264 ~~~~~D~v~~s~hK~l~~p~-g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~ 342 (502)
T 3hbx_A 264 RLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRN 342 (502)
T ss_dssp TSTTEEEEEEETTTTTCCCS-SCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEECcccccCCCC-CeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 112456554 448887887 89987775 44432 2211 0000 01222233445555566655443 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C---CCCEE
Q 021893 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T---HDTIV 253 (306)
Q Consensus 182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~---~~~~l 253 (306)
..++..++.+++++.|+++. +...... ....++.+.++... ..+..++.+.|.++|+++.. . +..++
T Consensus 343 ~~~~~~~~a~~l~~~L~~~~----~~~~~~~~~~~~~v~f~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~l 417 (502)
T 3hbx_A 343 VMENCRENMIVLREGLEKTE----RFNIVSKDEGVPLVAFSLKDSS-CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVL 417 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTT----CEEECSCSSSSSEEEEEESSCS-SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCC----CEEEEeCCCCceEEEEEecCCC-cCCHHHHHHHHHhCCcEEeeccCCcccCCceEE
Confidence 45666677777777777652 1111111 24456677665321 24566899999999998652 1 24689
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 021893 254 RLTPPLSISSNELQEGSKALHDVLELDLPKMRKPK 288 (306)
Q Consensus 254 Ri~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~~~~ 288 (306)
|++++..+++++++.+++.|+++++ .+.+.....
T Consensus 418 Risv~~~~t~edid~li~~L~~~l~-~l~~~~~~~ 451 (502)
T 3hbx_A 418 RVVIREDFSRTLAERLVIDIEKVMR-ELDELPSRV 451 (502)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHH-HHHTCC---
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHH-HHHhCcccc
Confidence 9999999999999999999999998 876654443
No 212
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.65 E-value=3.3e-15 Score=133.22 Aligned_cols=199 Identities=10% Similarity=0.028 Sum_probs=137.3
Q ss_pred CcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccc
Q 021893 59 DQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIP 137 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~ 137 (306)
+++++|++++++|++|.. .+ +++| +|+++++|++|+.+. ..+... ..+.-+.|++|.++ .. +
T Consensus 141 ~~t~~v~~~~~~n~tG~~~~~----l~~i------~~~~vivD~a~~~~~---~~~~~~--~~d~~~~s~~K~~g-~~-G 203 (362)
T 2c0r_A 141 DNAAYLHLTSNETIEGAQFKA----FPDT------GSVPLIGDMSSDILS---RPFDLN--QFGLVYAGAQKNLG-PS-G 203 (362)
T ss_dssp TTEEEEEEESEETTTTEECSS----CCCC------TTSCEEEECTTTTTS---SCCCGG--GCSEEEEETTTTTC-CS-S
T ss_pred CCcCEEEEeCCcCccceeccc----cccc------CCCEEEEEChhhccC---Cccchh--HCcEEEEecccccc-Cc-C
Confidence 579999999999999985 43 5555 899999999997321 111122 22223447889996 33 5
Q ss_pred ceeeEeCHHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHH
Q 021893 138 VSAVLADKEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQ 201 (306)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~ 201 (306)
+||+++++++++.+.+.. ....++.+...+.++.++++.+.+ ++..++++++++++++.|+++.
T Consensus 204 ~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 204 VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 789999999887775421 122346677888888899987654 3456777777777777777652
Q ss_pred hhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 202 QQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 202 ~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
..+. ..... ...+.++++.++. ..+..++++.|.++||.+.++. .+++|+++...+++++++++++.|+++++
T Consensus 284 ~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 284 GFYR-GCVDVDSRSDMNITFRLAS---EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp TSSE-ESSCGGGBCSSEEEEECSC---HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred Cccc-cCCChHHcCCcEEEEEcCC---cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 0000 00000 1234556666653 3567889999999999887653 46799998888899999999999998876
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.7e-14 Score=133.76 Aligned_cols=225 Identities=9% Similarity=0.035 Sum_probs=141.1
Q ss_pred CHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++||++|+++. ..+.+|+++..++++|.+.+ +++|.++|++||+++++|++|++.......+.....++ .
T Consensus 224 d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~ 299 (481)
T 4e1o_A 224 RGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY 299 (481)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc
Confidence 8999999998631 23777888888888998877 99999999999999999999986422222111111232 3
Q ss_pred CcEEEe--cccccCCcccceeeEeCH-HHHh-hcCCCC----c---cCC-----C---CCCHHHHHHHHHHHHHHhh---
Q 021893 122 PDMVIL--GKALGGGVIPVSAVLADK-EVML-CIQPGE----H---GST-----F---GGNPLASAVAIASLDVIRD--- 179 (306)
Q Consensus 122 ~d~~s~--sK~~~~G~~~~g~~~~~~-~~~~-~~~~~~----~---~~~-----~---~~~~~~~~aa~~al~~~~~--- 179 (306)
.|.+++ +|++++.+ .+|+++.++ .... .+.... . ... + .+.........++++.+..
T Consensus 300 aDsi~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~ 378 (481)
T 4e1o_A 300 ADSFTFNPSKWMMVHF-DCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNL 378 (481)
T ss_dssp CSEEEECHHHHSSCCS-SCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHH
T ss_pred CCEEEEChHHhcCCCC-ceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHH
Confidence 477655 59999777 788777754 4332 221110 0 000 0 0101122233344444433
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCc-eecc---CCCCEEEE
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI-LAKP---THDTIVRL 255 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi-~~~~---~~~~~lRi 255 (306)
++..++..++.+++++.|++.. +.....+....++++.+.. ......++.+.|.++|+ ++.+ .+..++|+
T Consensus 379 ~~~~~~~~~~a~~l~~~L~~~~----g~~~~~~~~~~~v~f~~~~--~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~ 452 (481)
T 4e1o_A 379 QAHVRHGTEMAKYFESLVRNDP----SFEIPAKRHLGLVVFRLKG--PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRF 452 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCT----TEECCSCCCSSEEEEEESS--CHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----CeEEecCCceeEEEEEeCC--chHHHHHHHHHHHhCCeEEEEeeEECCEEEEEE
Confidence 3356667777777777776641 1222222344556666643 13456789999999984 4443 34568999
Q ss_pred eCCC-CCCHHHHHHHHHHHHHHHhhhcC
Q 021893 256 TPPL-SISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 256 ~~~~-~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
++.. .++++||+.++++|+++++ ++.
T Consensus 453 ~~~~~~tt~~di~~~~~~i~~~~~-~l~ 479 (481)
T 4e1o_A 453 TVTSQFTTRDDILRDWNLIRDAAT-LIL 479 (481)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHH-HHh
Confidence 9654 4589999999999999988 653
No 214
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.64 E-value=2.2e-15 Score=137.08 Aligned_cols=214 Identities=14% Similarity=0.129 Sum_probs=133.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~~d~ 124 (306)
|+++|++.++ +++++|++++ ++|...+ +++|.++|++||+++|+||+|+.+. ..+..+ ..++ ..++
T Consensus 119 d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~-~~~~ 185 (418)
T 2c81_A 119 DPQLIKSAIT---DKTKAIIPVH---LFGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQRA--GTIG-DIGA 185 (418)
T ss_dssp CHHHHGGGCC---TTEEEECCBC---CTTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSSS-SEEE
T ss_pred CHHHHHHhhC---CCCeEEEEeC---CcCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCEec--cccc-ceEE
Confidence 7899998887 4688888754 5777766 9999999999999999999998553 223221 1111 2456
Q ss_pred EEe--cccccCCcccceeeEeC-HHHHhhcCCCCccC------------CCC--------------CCHHHHHHHHHHHH
Q 021893 125 VIL--GKALGGGVIPVSAVLAD-KEVMLCIQPGEHGS------------TFG--------------GNPLASAVAIASLD 175 (306)
Q Consensus 125 ~s~--sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~------------~~~--------------~~~~~~~aa~~al~ 175 (306)
.|| +|.+++| ++|+++.+ +++++.+....... .+. .+.+..+.....++
T Consensus 186 ~s~s~~K~~~~g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~ 263 (418)
T 2c81_A 186 FSCQQGKVLTAG--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ 263 (418)
T ss_dssp EECCTTSSSCSS--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT
T ss_pred EeccCCcccCCC--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHH
Confidence 677 8999874 88999884 77766543210000 011 12222222222232
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee------eEEEEEEecC-CChhhHHHHHHHHHHC-Cce---
Q 021893 176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG------LFNAVEFDKT-ALPVSAYDICLKMKER-GIL--- 244 (306)
Q Consensus 176 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g------~~~~i~~~~~-~~~~~~~~~~~~l~~~-Gi~--- 244 (306)
.+ ++..++.+++.+++++.|+++ ++........+ .++.+.+++. ..+.+..++.+.|.++ ||.
T Consensus 264 ~~--~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~ 337 (418)
T 2c81_A 264 EL--DDKNAIREKNAMFLNDALSKI----DGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFY 337 (418)
T ss_dssp TH--HHHHHHHHHHHHHHHHHHTTS----TTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTT
T ss_pred HH--HHHHHHHHHHHHHHHHHhccC----CCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCccc
Confidence 22 234555556666666666543 21221111111 1333555420 0023577899999999 999
Q ss_pred eccCC----------------------------------------CCEEEEeCCCCC-CHHHHHHHHHHHHHHHhhhc
Q 021893 245 AKPTH----------------------------------------DTIVRLTPPLSI-SSNELQEGSKALHDVLELDL 281 (306)
Q Consensus 245 ~~~~~----------------------------------------~~~lRi~~~~~~-t~~~i~~~~~~l~~~l~~~~ 281 (306)
++++. .+.||++++..+ |++|++.+++.|+++++ ++
T Consensus 338 v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~-~~ 414 (418)
T 2c81_A 338 LHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELAR-KF 414 (418)
T ss_dssp EECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH-TT
T ss_pred ccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHH-hh
Confidence 76531 148999999899 99999999999999988 64
No 215
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.63 E-value=2.8e-16 Score=143.55 Aligned_cols=251 Identities=12% Similarity=0.060 Sum_probs=157.9
Q ss_pred ceEEEEecCCCCcccchhcc--------cCCccccccCCCCCCCc---------ccccC-CCHHHHHHHHHhcCCcEEEE
Q 021893 3 AIIVSCCGCFHGRTLAAISM--------SCDNEAIRGFGPLLPGH---------LKVDF-GDITALEKIFKESGDQIAGF 64 (306)
Q Consensus 3 ~~ii~~~~~~hg~~~~~~~~--------~~~~~~~~~~~~~~~~~---------~~~~~-~d~~~le~~i~~~~~~~~~v 64 (306)
..|++..|+.++....+.++ ..+....-...|.++.. ..+++ .|++.|++.++ ++++++
T Consensus 124 ~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~---~~~k~v 200 (427)
T 2hox_A 124 RYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAANYVNVSN---PEQYIE 200 (427)
T ss_dssp CEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSC---GGGEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeecCCHHHHHHhhc---CCceEE
Confidence 46888889888877777666 33332222333444331 11111 26778877665 367888
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe
Q 021893 65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA 143 (306)
Q Consensus 65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~ 143 (306)
+++.++|++|.+.+ +.+ + ++..+.|+++-+ ......... .+....+.||||.++ +|+ |+||+++
T Consensus 201 ~l~~p~NPtG~~~~--~~l-------~--~~~~i~d~~~~~--~~~s~~~~~-~~~~i~~~S~SK~~g~~G~-RiG~~~~ 265 (427)
T 2hox_A 201 MVTSPNNPEGLLRH--AVI-------K--GCKSIYDMVYYW--PHYTPIKYK-ADEDILLFTMSKFTGHSGS-RFGWALI 265 (427)
T ss_dssp EEESSCTTTCCCCC--CSS-------T--TCEEEEECTTCS--TTTSCCCSC-BCCSEEEEEHHHHTSCGGG-CCEEEEE
T ss_pred EEcCCCCCcccccH--HHH-------c--CCCEEEeecccC--CCCCccccC-CCceEEEEeChhcCCCCCc-eEEEEEE
Confidence 88888999997764 432 2 567888887742 110111111 233344559999998 899 9999999
Q ss_pred -CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---------cc----HHHHHHHHHHHHHHHHHHH-HhhC----
Q 021893 144 -DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---------EK----LAERSAHLGEELRQHLFKI-QQQF---- 204 (306)
Q Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---------~~----~~~~~~~~~~~l~~~L~~~-~~~~---- 204 (306)
++++++.+........+..+.+.+.++..+++...+ ++ ..++++++.+.+.+.|++. ....
T Consensus 266 ~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 345 (427)
T 2hox_A 266 KDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELP 345 (427)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCC
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccc
Confidence 588888877644444456678888887777765321 12 2345555555555555543 1010
Q ss_pred -CC----ceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893 205 -PN----YVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 205 -~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
+. .....+..|+++|+.++. +..++++.|+ ++||.+.|+ +++++|+++. .+++++++++++|
T Consensus 346 ~~~~~~~~~~~~p~~g~f~~~~~~~-----~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~~l~~l 418 (427)
T 2hox_A 346 QSEYCNYFRRMRPPSPSYAWVKCEW-----EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI--KTQDDFDQLMYYL 418 (427)
T ss_dssp SCEEETTTTEEECCCCSEEEEEECS-----GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECS--SCHHHHHHHHHHH
T ss_pred cccccccccccCCCCceEEEEECCC-----cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEec--CCHHHHHHHHHHH
Confidence 00 001233458888988863 2345777775 789999875 3689999954 5899999999999
Q ss_pred HHHHh
Q 021893 274 HDVLE 278 (306)
Q Consensus 274 ~~~l~ 278 (306)
++++.
T Consensus 419 ~~~~~ 423 (427)
T 2hox_A 419 KDMVK 423 (427)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99887
No 216
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.63 E-value=4e-15 Score=135.84 Aligned_cols=224 Identities=11% Similarity=0.043 Sum_probs=142.8
Q ss_pred cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEcc-ccCCCCc
Q 021893 2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEP-IQGEAGV 75 (306)
Q Consensus 2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~-~~~~~G~ 75 (306)
+.+||+..+..|+.+.....++++ ....+......+..++. .|+++|+++++ +++++|++++ ++|++|.
T Consensus 107 Gd~Vl~~~~~~y~~~~~~~~l~g~--~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~---~~tk~V~i~~sp~np~~~ 181 (431)
T 3ht4_A 107 GDELLYITGKPYDTLEEIVGVRGK--GVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH---SNTKMIGIQRSKGYATRP 181 (431)
T ss_dssp TCEEEECSSSCCTTHHHHTTSSSC--SSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC---TTEEEEEEECSCTTSSSC
T ss_pred CCEEEEeCCCCchhHHHHHhhccc--ccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC---CCCeEEEEECCCCCCCCC
Confidence 357777776667776665555442 12222222233455555 38999999997 5799999995 5656653
Q ss_pred ccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC--cccceeeEeCHHHHhhc
Q 021893 76 IIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG--VIPVSAVLADKEVMLCI 151 (306)
Q Consensus 76 ~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G--~~~~g~~~~~~~~~~~~ 151 (306)
..+.+.+++|.++|++ +|+++|+||+|+.+....... .++.+..+.|++|.++|| . +.|++++++++++.+
T Consensus 182 -~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~-~GG~v~~~~~li~~l 256 (431)
T 3ht4_A 182 -SFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVK-TGGYIVGKEQYVEAC 256 (431)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCS-SCEEEEECHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCC-ceEEEEecHHHHHHH
Confidence 4577889999999999 999999999998654333322 224444555899999864 4 558999999988876
Q ss_pred CCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC-CCceeeEEEeeeEEEEEEecCC
Q 021893 152 QPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF-PNYVKEVRGRGLFNAVEFDKTA 226 (306)
Q Consensus 152 ~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~ 226 (306)
+.. ........+.....++...++.+ ....++..++.+.+++.|++++... | . ...+..+.++.+.+.+
T Consensus 257 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g~~v~p-~-~~~~~~~li~~i~l~~-- 330 (431)
T 3ht4_A 257 AYRLTSPGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLGMNTSP-A-WNAPRTDLIQSVQFDD-- 330 (431)
T ss_dssp HHHHSCTTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCCEES-C-TTSCCSSSCCEEECCC--
T ss_pred HHHhccCCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCcCEecC-C-CCCCCccEEEEEEeCC--
Confidence 531 11111111111122344444443 2346778888889999998875321 1 0 1223445577887764
Q ss_pred ChhhHHHHHHHHHHCC
Q 021893 227 LPVSAYDICLKMKERG 242 (306)
Q Consensus 227 ~~~~~~~~~~~l~~~G 242 (306)
.....++++.|.+..
T Consensus 331 -~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 331 -KDRMIAFCQAIQYAS 345 (431)
T ss_dssp -HHHHHHHHHHHHHTS
T ss_pred -HHHHHHHHHHHHhcC
Confidence 456778999999873
No 217
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.62 E-value=4.2e-14 Score=131.99 Aligned_cols=227 Identities=16% Similarity=0.094 Sum_probs=138.2
Q ss_pred CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++||++|++. +..+++|+++.+++++|.+.+ |++|.++|++||+++++|++|++.......+.....++ .
T Consensus 231 d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~ 306 (511)
T 3vp6_A 231 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER 306 (511)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc----HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCcc
Confidence 899999999853 233899999999999998877 99999999999999999999985322211111112222 3
Q ss_pred CcEEE--ecccccCCcccceeeEeC-HHHHhhc-CC---CCcc-C----------CC---CCCHHHHHHHHHHHHHHhh-
Q 021893 122 PDMVI--LGKALGGGVIPVSAVLAD-KEVMLCI-QP---GEHG-S----------TF---GGNPLASAVAIASLDVIRD- 179 (306)
Q Consensus 122 ~d~~s--~sK~~~~G~~~~g~~~~~-~~~~~~~-~~---~~~~-~----------~~---~~~~~~~~aa~~al~~~~~- 179 (306)
.|.++ .+|++++.+ .+|+++.+ +.++..+ .. .... . .+ .+.......+..+++.+..
T Consensus 307 aDsv~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~ 385 (511)
T 3vp6_A 307 ANSVTWNPHKMMGVLL-QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTV 385 (511)
T ss_dssp CSEEEECTTSTTCCCS-CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEECcccccCCCc-CeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHH
Confidence 46664 459998777 88888775 4444432 11 0000 0 00 0111122333344444433
Q ss_pred --ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE--EEeeeEEEEEEecCCC-------------hhhHHHHHHHHHHCC
Q 021893 180 --EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTAL-------------PVSAYDICLKMKERG 242 (306)
Q Consensus 180 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~-------------~~~~~~~~~~l~~~G 242 (306)
++..++..++.+++++.|++. |+..... .....++.+.+.+... .....++.+.|+++|
T Consensus 386 gl~~~~~~~~~~a~~l~~~L~~~----pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G 461 (511)
T 3vp6_A 386 GFENQINKCLELAEYLYAKIKNR----EEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESG 461 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSC----TTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcC
Confidence 345667777778888777764 1122111 1233334444322110 011346899999998
Q ss_pred ceecc-----CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 243 ILAKP-----THDTIVRLTP-PLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 243 i~~~~-----~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++.. .+.+++|+++ +..++.+||+.+++.|++.-+ .+-
T Consensus 462 ~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~-~~~ 506 (511)
T 3vp6_A 462 TTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ-DLH 506 (511)
T ss_dssp SCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred CEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH-hhh
Confidence 65432 1235799998 678899999999999998877 553
No 218
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.62 E-value=2.4e-14 Score=132.85 Aligned_cols=223 Identities=10% Similarity=0.015 Sum_probs=139.1
Q ss_pred CHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893 46 DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R 121 (306)
Q Consensus 46 d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~ 121 (306)
|+++|+++|+++. ..+.+|+++.+++++|.+.+ +++|.++|++||+++++|++|+++......+.....++ .
T Consensus 218 d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~ 293 (486)
T 1js3_A 218 RASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF 293 (486)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG
T ss_pred CHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc
Confidence 8999999998531 12357888888889998877 99999999999999999999986422111111101121 3
Q ss_pred CcEEEe--cccccCCcccceeeEeCHH-H-HhhcCCC---Ccc-----------------CCCCCCHHHHHHHHHHHHHH
Q 021893 122 PDMVIL--GKALGGGVIPVSAVLADKE-V-MLCIQPG---EHG-----------------STFGGNPLASAVAIASLDVI 177 (306)
Q Consensus 122 ~d~~s~--sK~~~~G~~~~g~~~~~~~-~-~~~~~~~---~~~-----------------~~~~~~~~~~~aa~~al~~~ 177 (306)
.|.+++ +|.+++.+ ++|+++.+++ . .+.+... ... .+.....+.+ .++++.+
T Consensus 294 adsi~~~~hK~~~~p~-~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~---~~al~~~ 369 (486)
T 1js3_A 294 ADSFNFNPHKWLLVNF-DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKM---WFVFRMY 369 (486)
T ss_dssp CSEEEECHHHHSSCCS-SCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHH---HHHHHHH
T ss_pred cCeeEEchhhhcCCCc-ceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHH---HHHHHHH
Confidence 466654 59998777 9999988644 2 3444211 000 0001123333 3344433
Q ss_pred hh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec-c---CCC
Q 021893 178 RD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-P---THD 250 (306)
Q Consensus 178 ~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-~---~~~ 250 (306)
.. ++..++..++.+++.+.|++. ++.....+..+.++.+.+.. ......++.+.|.++|+.+. + .+.
T Consensus 370 g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~--~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 443 (486)
T 1js3_A 370 GVKGLQAYIRKHVQLSHEFEAFVLQD----PRFEVCAEVTLGLVCFRLKG--SDGLNEALLERINSARKIHLVPCRLRGQ 443 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC----TTEEECSCCCSSEEEEEESS--CHHHHHHHHHHHHHHTSCBCEEEEETTE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCceeEEEEEecC--hHHHHHHHHHHHHhcCCEEEEEEEECCE
Confidence 33 334566667777777777764 11221112234455555542 12235789999999986543 2 245
Q ss_pred CEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 251 TIVRLTP-PLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 251 ~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
+++|+++ +..+++++++.++++|+++++ ++.+
T Consensus 444 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~-~~~~ 476 (486)
T 1js3_A 444 FVLRFAICSRKVESGHVRLAWEHIRGLAA-ELLA 476 (486)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHC
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 7899996 445789999999999999988 7654
No 219
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.61 E-value=1.7e-14 Score=132.11 Aligned_cols=211 Identities=15% Similarity=0.156 Sum_probs=132.2
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++.|+++++ +++++|++++ ++|...+ +++|.++|+++|+++|+||+|+ |....+ ..++..+|+
T Consensus 147 d~~~l~~~i~---~~~~~v~~~~---~~g~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~~~~d~ 211 (437)
T 3bb8_A 147 NASLIEAAVS---DKTKAIMIAH---TLGNLFD----LAEVRRVADKYNLWLIEDCCDALGSTYDG-----KMAGTFGDI 211 (437)
T ss_dssp CGGGHHHHCC---TTEEEEEEEC---GGGCCCC----HHHHHHHHHHHTCEEEEECTTCTTCEETT-----EETTSSSSE
T ss_pred CHHHHHHhcC---CCCeEEEEeC---CCCChhc----HHHHHHHHHHcCCEEEEECccccCceECC-----eecccccCE
Confidence 7889998887 4688888764 2344455 9999999999999999999998 432222 222323566
Q ss_pred --EEeccccc-CCcccceeeEeCHHHHhh----cCCCCc------------------------------------cCCCC
Q 021893 125 --VILGKALG-GGVIPVSAVLADKEVMLC----IQPGEH------------------------------------GSTFG 161 (306)
Q Consensus 125 --~s~sK~~~-~G~~~~g~~~~~~~~~~~----~~~~~~------------------------------------~~~~~ 161 (306)
.||+|+.+ +|. +.|+++.+++.+.. +..... ...+.
T Consensus 212 ~~~s~~~~k~l~~g-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 290 (437)
T 3bb8_A 212 GTVSFYPAKHITMG-EGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLK 290 (437)
T ss_dssp EEEECSTTSSSCCS-SCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCC
T ss_pred EEEECcCCcCCCCC-CeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccC
Confidence 45544444 454 78889888554332 111100 01112
Q ss_pred CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceee-E---EEeee-EEEEEEecCCChhhHHHHHH
Q 021893 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-V---RGRGL-FNAVEFDKTALPVSAYDICL 236 (306)
Q Consensus 162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~---~~~g~-~~~i~~~~~~~~~~~~~~~~ 236 (306)
.+.+..+++.++++.+ ++..++.+++.+++++.|+++... .... . ...+. .+.+.+... .+.+..++.+
T Consensus 291 ~~~~~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 364 (437)
T 3bb8_A 291 ITDMQAACGLAQLERI--EEFVEKRKANFKYLKDALQSCADF---IELPEATENSDPSWFGFPITLKED-SGVSRIDLVK 364 (437)
T ss_dssp CBHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHGGGGTTT---EECCCCCTTEECCCSSEEEEECGG-GSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhccCCc---cccCCCCCCCceeeEEEEEEECCc-CcCcHHHHHH
Confidence 3466776777777655 334555677778888877765210 1111 0 11121 122223310 0235778999
Q ss_pred HHHHCCceeccCCC----------------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 237 KMKERGILAKPTHD----------------------------TIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 237 ~l~~~Gi~~~~~~~----------------------------~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.|.++||.+++... +.||++++..+|++|++.+++.|+++++
T Consensus 365 ~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 365 FLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 99999999875421 1499999999999999999999998876
No 220
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.61 E-value=7.2e-14 Score=129.29 Aligned_cols=226 Identities=12% Similarity=0.036 Sum_probs=141.8
Q ss_pred CCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-
Q 021893 45 GDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV- 120 (306)
Q Consensus 45 ~d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~- 120 (306)
-|+++|+++|+++ +..+.+|+++..++++|.+.+ +++|.++|++||+++++|++|++.......+.....++
T Consensus 216 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~ 291 (475)
T 3k40_A 216 MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE 291 (475)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG
T ss_pred cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc
Confidence 3899999999863 223677888888888998888 99999999999999999999985322211111111222
Q ss_pred CCcEEEe--cccccCCcccceeeEeCHH-HH-hhcCCC---C-c---c-----CCC---CCCHHHHHHHHHHHHHHhh--
Q 021893 121 RPDMVIL--GKALGGGVIPVSAVLADKE-VM-LCIQPG---E-H---G-----STF---GGNPLASAVAIASLDVIRD-- 179 (306)
Q Consensus 121 ~~d~~s~--sK~~~~G~~~~g~~~~~~~-~~-~~~~~~---~-~---~-----~~~---~~~~~~~~aa~~al~~~~~-- 179 (306)
..|.+++ +|++++.+ .+|+++.+++ .+ +.+... . . . ..+ .+-........++++.+..
T Consensus 292 ~~Ds~~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g 370 (475)
T 3k40_A 292 SADSFNFNPHKWMLVNF-DCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVEN 370 (475)
T ss_dssp GCSEEEECHHHHSSCCS-SCEEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHH
T ss_pred cCCEEEECchhccCCCC-ceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHH
Confidence 3477765 49998777 8888877643 32 222110 0 0 0 000 0101123334444554443
Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee-cc---CCCCEEE
Q 021893 180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA-KP---THDTIVR 254 (306)
Q Consensus 180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~-~~---~~~~~lR 254 (306)
++..++..++.+++++.|++.. +.....+....++.+.+.. ......++.+.|.++|..+ .+ .+..++|
T Consensus 371 ~~~~~~~~~~~a~~l~~~L~~~~----g~~l~~~~~~~iv~f~~~~--~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR 444 (475)
T 3k40_A 371 LQAHIRRHCNFAKQFGDLCVADS----RFELAAEINMGLVCFRLKG--SNERNEALLKRINGRGHIHLVPAKIKDVYFLR 444 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHST----TEEESSCCBTTEEEEEESS--CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC----CEEEecCCceEEEEEEeCC--chHHHHHHHHHHHhCCcEEEEeeEECCEEEEE
Confidence 3456677778888888887752 1222222344556666653 1345678999999988643 33 3467899
Q ss_pred EeCC-CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 255 LTPP-LSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 255 i~~~-~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+++. ..++++||+.++++|+++++ ++.
T Consensus 445 ~~~~~~~tt~~di~~~~~~i~~~~~-~~~ 472 (475)
T 3k40_A 445 MAICSRFTQSEDMEYSWKEVSAAAD-EME 472 (475)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHH-HHh
Confidence 9965 44689999999999999988 654
No 221
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.60 E-value=2.8e-14 Score=128.51 Aligned_cols=204 Identities=13% Similarity=0.107 Sum_probs=132.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|+++|+++++ +++++|++++ ++|...+ +++|.++|++||+++|+|++|+ |.... ...++..+|+
T Consensus 117 d~~~l~~~i~---~~~~~v~~~~---~~g~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~-----~~~~g~~~~~ 181 (390)
T 3b8x_A 117 DIESLKEAVT---DSTKAILTVN---LLGNPNN----FDEINKIIGGRDIILLEDNCESMGATFN-----NKCAGTFGLM 181 (390)
T ss_dssp CHHHHHHHCC---TTEEEEEEEC---GGGCCCC----HHHHHHHHTTSCCEEEEECTTCTTCEET-----TEETTSSSSE
T ss_pred CHHHHHHHhC---cCCeEEEEEC---CccChhh----HHHHHHHHHHcCCEEEEECcCcccCEEC-----Ccccccccce
Confidence 8999999987 4688888764 2454556 9999999999999999999998 43222 2344566788
Q ss_pred EEeccccc----CCcccceeeEeCH-HHHhhcCC---CC----------------------------ccCCCCCCHHHHH
Q 021893 125 VILGKALG----GGVIPVSAVLADK-EVMLCIQP---GE----------------------------HGSTFGGNPLASA 168 (306)
Q Consensus 125 ~s~sK~~~----~G~~~~g~~~~~~-~~~~~~~~---~~----------------------------~~~~~~~~~~~~~ 168 (306)
.++||..+ +|. .|++++++ ++.+.++. .. .+..+..+.+..+
T Consensus 182 ~~~s~~~~k~~~~g~--gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa 259 (390)
T 3b8x_A 182 GTFSSFYSNHIATME--GGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGA 259 (390)
T ss_dssp EEEECCTTSSSCSSS--CEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHH
T ss_pred EEEEccCCCCCccCC--ceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHH
Confidence 88886554 333 37888875 55443321 11 0111225667777
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE---EEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee
Q 021893 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 245 (306)
Q Consensus 169 aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~ 245 (306)
++.++++.+. +..++.+++.+++.+.|+++ ++..... ......+++.++.. .+.+..++.+.|.++||.+
T Consensus 260 ~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~L~~~gI~v 332 (390)
T 3b8x_A 260 IGIEQLKKLP--RFISVRRKNAEYFLDKFKDH----PYLDVQQETGESSWFGFSFIIKKD-SGVIRKQLVENLNSAGIEC 332 (390)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHHHHTTC----SSEEECCCCSBCCCCEEEEEECTT-SCCCHHHHHHHHHHTTBCC
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHhcCC----CCcccCCCCCCcccEEEEEEecCc-CcccHHHHHHHHHHCCCCe
Confidence 7766676553 35667777777777777653 1121111 11222345555421 0235778999999999988
Q ss_pred ccC-------C-C---------------------CEEEEeCCCCCCHHHHHHHHHHH
Q 021893 246 KPT-------H-D---------------------TIVRLTPPLSISSNELQEGSKAL 273 (306)
Q Consensus 246 ~~~-------~-~---------------------~~lRi~~~~~~t~~~i~~~~~~l 273 (306)
++. . + +.||++++..+|++|++++++.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 333 RPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp BCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred eeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 852 1 0 25999999999999999999876
No 222
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.59 E-value=1.9e-14 Score=133.00 Aligned_cols=218 Identities=12% Similarity=0.079 Sum_probs=139.5
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCC
Q 021893 44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRP 122 (306)
Q Consensus 44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~ 122 (306)
..|+++||++++++ ++++|+++..+++ ...+ +++|+++|++||++|++|++|. |+...|... ....+.+.
T Consensus 189 ~iD~d~le~~l~~~--~~klIi~~~s~~~--~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~-~~~~~aDi 259 (490)
T 2a7v_A 189 LIDYNQLALTARLF--RPRLIIAGTSAYA--RLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIP-SPFKHADI 259 (490)
T ss_dssp SBCHHHHHHHHHHH--CCSEEEECCSSCC--SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC-CGGGTCSE
T ss_pred CcCHHHHHHHHhhc--CCcEEEEcCCCCC--Cccc----HHHHHHHHHHcCCEEEEccccccccccCCcCC-CCCCCCCE
Confidence 34899999999864 4567777654433 3455 9999999999999999999986 543333211 11112222
Q ss_pred cEEEecccccCCcccceeeEeCHH---------------HHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh---ccHH
Q 021893 123 DMVILGKALGGGVIPVSAVLADKE---------------VMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD---EKLA 183 (306)
Q Consensus 123 d~~s~sK~~~~G~~~~g~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~---~~~~ 183 (306)
-+.|++|+++ |+ +.|+++++++ +.+.++........ ..+...+++..++++.+.. +++.
T Consensus 260 v~~S~hK~l~-Gp-~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~ 337 (490)
T 2a7v_A 260 VTTTTHKTLR-GA-RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS 337 (490)
T ss_dssp EEEESSGGGC-SC-SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EEECCcccCc-cc-cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHH
Confidence 3347779995 45 6688888764 22333321111111 2334444454556665543 3467
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----CCCEEE
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----HDTIVR 254 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lR 254 (306)
+++.++.+++++.|++.+.. +........++++++.+. +.+..++.+.|.+.||.+.. + .+..||
T Consensus 338 ~~~~~na~~L~~~L~~~G~~----v~~~~t~t~lv~vdl~~~--g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iR 411 (490)
T 2a7v_A 338 LQVLKNARAMADALLERGYS----LVSGGTDNHLVLVDLRPK--GLDGARAERVLELVSITANKNTCPGDRSAITPGGLR 411 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCE----EGGGSCSSSEEEEECTTT--TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred HHHHHHHHHHHHHHHHcCcE----EecCCCCCeEEEEEeCCC--CCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceE
Confidence 78888999999999885311 111112345677776542 34567788999999999873 2 357899
Q ss_pred EeCC----CCCCHHHHHHHHHHHHHHHh
Q 021893 255 LTPP----LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 255 i~~~----~~~t~~~i~~~~~~l~~~l~ 278 (306)
++.+ ...+++|++.+++.|.+++.
T Consensus 412 ig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 412 LGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 9653 35789999999999999886
No 223
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.54 E-value=4.8e-14 Score=126.67 Aligned_cols=216 Identities=16% Similarity=0.113 Sum_probs=131.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|++++++++...++++++|+++ +++|...+ +++|.++|+ ||+++|+|++|+ |....+.... ..+ .+.++
T Consensus 115 d~~~l~~~i~~~~~~tk~v~~~---~~~G~~~~----~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g-~~~-~d~~~ 184 (377)
T 3ju7_A 115 DKTVLWDKIEELKEEVAIVVPY---ATFGSWMN----LEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYG-QDF-SGMII 184 (377)
T ss_dssp CHHHHHHHHHHHGGGEEEECCB---CGGGBCCC----CHHHHHHHH-TTCCBEEECTTCTTCEETTEETT-TTC-SSEEE
T ss_pred CHHHHHHHHhcCCCCceEEEEE---CCCCCccC----HHHHHHHHh-cCCEEEEECCCccCCeECCEecc-CCC-CcEEE
Confidence 8999999984311238888743 34677777 999999999 999999999997 2111111110 000 12344
Q ss_pred EEec--ccccCCcccceeeEe-CHHHHhhcCCCCc------------cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893 125 VILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEH------------GSTFGGNPLASAVAIASLDVIRDEKLAERSAHL 189 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~ 189 (306)
.||+ |.+++| ..|+++. ++++.+.++.... +..+..+.+.++.+...++.+ +...++.+++
T Consensus 185 ~S~~~~K~l~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l--~~~~~~~~~~ 260 (377)
T 3ju7_A 185 YSFHATKPFGIG--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKW--DDKLKERTRI 260 (377)
T ss_dssp EECBTTSSSCCB--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHH
T ss_pred EECCCCCcCCCC--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 4543 999864 4566665 5666655432211 123345566666666666544 3356777788
Q ss_pred HHHHHHHHHHHHhhCCCceeeEE-Eee-eEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------------------
Q 021893 190 GEELRQHLFKIQQQFPNYVKEVR-GRG-LFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------------ 249 (306)
Q Consensus 190 ~~~l~~~L~~~~~~~~~~~~~~~-~~g-~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------------ 249 (306)
.+++.+.|+.....-........ ... .++.+.+++ ..+..++.+.|.++||.++...
T Consensus 261 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~ 337 (377)
T 3ju7_A 261 SEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE---EVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDL 337 (377)
T ss_dssp HHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT---TSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCC
T ss_pred HHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC---hhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCC
Confidence 88888888775311000111101 111 122343332 2347889999999999876421
Q ss_pred -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893 250 -------DTIVRLTPPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 250 -------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+.||+.++...|++|++++++.|++++.
T Consensus 338 p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 338 TRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp HHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred HHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence 25789998889999999999999988776
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.53 E-value=5.8e-13 Score=121.91 Aligned_cols=199 Identities=15% Similarity=0.179 Sum_probs=125.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh-hhcccccccccccccCCCCCcEEEe-ccccc----
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI-QSGLARSGRMLASDWEEVRPDMVIL-GKALG---- 132 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~-~~g~~~~g~~~~~~~~~~~~d~~s~-sK~~~---- 132 (306)
+++++|+++.+ |++|.+.+ +++|.++|+++|+++++|.. ++ ++... . ... ...|++++ +|.|+
T Consensus 195 ~~t~~v~i~~p-n~tG~~~~----l~~i~~la~~~g~~vivd~d~~a-~g~~~--~-~~~--~g~D~~~~s~kk~~~~~~ 263 (438)
T 1wyu_A 195 EEVGAVVVQNP-NFLGALED----LGPFAEAAHGAGALFVAVADPLS-LGVLK--P-PGA--YGADIAVGDGQSLGLPMG 263 (438)
T ss_dssp TTEEEEEEESS-CTTSBCCC----HHHHHHHHHHTTCEEEEECCTTG-GGTBC--C-HHH--HTCSEEEEECTTTTCCCG
T ss_pred CCeEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechhh-ccCcC--C-Ccc--CCCCEEEECCcccCCCcc
Confidence 57899998887 89998887 99999999999999996632 22 21111 1 112 24577655 47653
Q ss_pred -CCcccceeeEeCHHHHhhcCCCCc--------------------------cCCCCC---CHHHHHHHHHHHHHHhh---
Q 021893 133 -GGVIPVSAVLADKEVMLCIQPGEH--------------------------GSTFGG---NPLASAVAIASLDVIRD--- 179 (306)
Q Consensus 133 -~G~~~~g~~~~~~~~~~~~~~~~~--------------------------~~~~~~---~~~~~~aa~~al~~~~~--- 179 (306)
+|. ++|++++++++++.+..... ..+... +.+...++...++.+..
T Consensus 264 ~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~ 342 (438)
T 1wyu_A 264 FGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGL 342 (438)
T ss_dssp GGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHH
Confidence 577 89999999988877643210 112211 22322222222444433
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee--ccC---CCCEEE
Q 021893 180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA--KPT---HDTIVR 254 (306)
Q Consensus 180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~--~~~---~~~~lR 254 (306)
++..++.+++++++.+.|+++. +.... .....+..+.+.. +.+..++++.|.++||.+ .++ +++++|
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~~~----g~~~~-~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lR 414 (438)
T 1wyu_A 343 REVALKSVEMAHKLHALLLEVP----GVRPF-TPKPFFNEFALAL---PKDPEAVRRALAERGFHGATPVPREYGENLAL 414 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTST----TCEEC-SCSSBCSEEEEEC---SSCHHHHHHHHHHTTCCCCEECCTTSCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----CeEEC-CCCCeEEEEEEeC---CCCHHHHHHHHHHCCceeccccccccCCCeEE
Confidence 2355666677777777776641 11111 1112222233332 135678999999999998 443 378999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHH
Q 021893 255 LTPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 255 i~~~~~~t~~~i~~~~~~l~~~l 277 (306)
+++...++++|++.++++|++++
T Consensus 415 is~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 415 FAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHC
T ss_pred EEecccCCHHHHHHHHHHHHHHh
Confidence 99988899999999999998764
No 225
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.51 E-value=2.6e-13 Score=122.96 Aligned_cols=181 Identities=9% Similarity=0.027 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEP----IQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~----~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
.|+++++++++ +++++|++++ ++|++|.+.+ +++|.++|++ ||+++++|++|+.+....... .+
T Consensus 147 ~d~e~l~~ai~---~~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~---~~ 216 (409)
T 3jzl_A 147 VDFPRIAKKMT---PKTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPP---EV 216 (409)
T ss_dssp CCHHHHHHHCC---TTEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSG---GG
T ss_pred cCHHHHHHhcc---CCCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccccccCCcc---cc
Confidence 58999999987 5799999999 9999998877 9999999999 999999999997432111111 12
Q ss_pred CCCCcEEEecccccCCc-ccceeeEeCHHHHhhcCCC--C--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGGGV-IPVSAVLADKEVMLCIQPG--E--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL 193 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~G~-~~~g~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l 193 (306)
+.+.-+.|++|.++|+. ...||+++++++++.++.. . .............++...++.+ ....++..++...+
T Consensus 217 g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~l 294 (409)
T 3jzl_A 217 GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFT 294 (409)
T ss_dssp TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHH
Confidence 33333448889999542 1468999999998877541 1 1111111111123344444433 23466777888888
Q ss_pred HHHHHHHHhhC-CCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 194 RQHLFKIQQQF-PNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 194 ~~~L~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
++.|++++... |. ...+....++++.+.+ ......|++.|....
T Consensus 295 a~~L~~~g~~v~p~--~~~~~~~~i~~i~l~~---~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 295 AAMLAEFGVEADPV--WDAPRTDLIQSVSFHN---KEKMVAFAQAIQAAS 339 (409)
T ss_dssp HHHHHHTTCEEESC--TTSCCSSSCCEEECSC---HHHHHHHHHHHHHTS
T ss_pred HHHHHhCCCcccCC--CCCCCccEEEEEEeCC---HHHHHHHHHHHHhcC
Confidence 88888864210 00 0011222267777763 566778999999884
No 226
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.51 E-value=6.5e-13 Score=119.39 Aligned_cols=232 Identities=15% Similarity=0.115 Sum_probs=147.4
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCc
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPD 123 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d 123 (306)
|++.||++|++++ +.+.+|+.++.++.++..-+ |++|.++|++||+++++||+|+........+..+.+.. ..|
T Consensus 201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 8999999999985 45666666655554444456 99999999999999999999985322222121222223 378
Q ss_pred EEEec--ccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893 124 MVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL 197 (306)
Q Consensus 124 ~~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L 197 (306)
+++.| |.+-.-+ +.+.+.. ++++++.+..... ++-+ .......+.++..+.. .++.++..++.+++++.|
T Consensus 277 ~vVqS~HK~llvpI-GG~ii~~~d~e~l~~~~~~yP-Gr~S--~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L 352 (501)
T 3hl2_A 277 AFVQSLDKNFMVPV-GGAIIAGFNDSFIQEISKMYP-GRAS--ASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQI 352 (501)
T ss_dssp EEEEEHHHHHCCCS-SCEEEEESCHHHHHHHHHTSC-SCBC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccceeec-CceEEEeCCHHHHHHHHHhCC-CCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776 7664222 2222433 5667776543221 1111 1222222223333332 446778889999999999
Q ss_pred HHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHCCce---eccC---------------------CCC
Q 021893 198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKERGIL---AKPT---------------------HDT 251 (306)
Q Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~---~~~~---------------------~~~ 251 (306)
+++...++..+...+.....+.+.+.... ......+|...|..++|. +.+. .-.
T Consensus 353 ~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~ 432 (501)
T 3hl2_A 353 KKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCA 432 (501)
T ss_dssp HHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSC
T ss_pred HHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCch
Confidence 99987665555566655566677665432 123466889999988543 3221 136
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893 252 IVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK 286 (306)
Q Consensus 252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~~ 286 (306)
++-++..+.++++|++.++++|++.+. .+.+...
T Consensus 433 yl~~a~aiG~~~~~v~~~~~~l~~~~~-~~~~~~~ 466 (501)
T 3hl2_A 433 YLNAASAIGMKMQDVDLFIKRLDRCLK-AVRKERS 466 (501)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHH-HHHC---
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHhhc
Confidence 788888889999999999999999998 8765443
No 227
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.51 E-value=2e-13 Score=131.67 Aligned_cols=230 Identities=11% Similarity=-0.040 Sum_probs=140.1
Q ss_pred CHHHH-----HHHHHhcCCc---E----EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-cccccc-
Q 021893 46 DITAL-----EKIFKESGDQ---I----AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGR- 111 (306)
Q Consensus 46 d~~~l-----e~~i~~~~~~---~----~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~- 111 (306)
|+++| +++|+++.++ + ++++++.++ ++|.+.+ +++|.++|++||++|++||+|++ +...+.
T Consensus 255 d~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~G~v~d----l~~I~~la~~~g~~livDeAh~~~~~f~~~~ 329 (730)
T 1c4k_A 255 YDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YDGTIYN----AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMM 329 (730)
T ss_dssp CGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TTSEEEC----HHHHHHHHGGGBSEEEEECTTCCGGGSSGGG
T ss_pred CHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CCCeecC----HHHHHHHHHHcCCeEEEEcccccccccCccc
Confidence 56666 8888754111 2 566665543 6888888 99999999999999999999973 221111
Q ss_pred ----ccccccCCCC----CcEEEecccccCCcccceeeEeCHHHHh---------hcCCC-CccCCCCCCHHHHHHHHHH
Q 021893 112 ----MLASDWEEVR----PDMVILGKALGGGVIPVSAVLADKEVML---------CIQPG-EHGSTFGGNPLASAVAIAS 173 (306)
Q Consensus 112 ----~~~~~~~~~~----~d~~s~sK~~~~G~~~~g~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~aa~~a 173 (306)
.+..+.++.+ .-+.|++|+++|-- ..|+++.+++.+. .+... ....+.+.+...+++..++
T Consensus 330 ~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~-~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA 408 (730)
T 1c4k_A 330 RNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS-QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVN 408 (730)
T ss_dssp GGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT-TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHH
T ss_pred CCcCcccccccCCCCCCEEEEECCCCCCCCCC-CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 1112123332 12337779876432 3445655443221 11100 0112234556666666677
Q ss_pred HHHHhh---ccHHHHHHHHHHHHHHHHHH-HH-hh-CCCce----------------------ee--------E-EEeee
Q 021893 174 LDVIRD---EKLAERSAHLGEELRQHLFK-IQ-QQ-FPNYV----------------------KE--------V-RGRGL 216 (306)
Q Consensus 174 l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~-~~-~~~~~----------------------~~--------~-~~~g~ 216 (306)
++.+.. .++.++..++.+++++.|++ +. .. +.+.. .. . ...+.
T Consensus 409 ~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 488 (730)
T 1c4k_A 409 AAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQ 488 (730)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTC
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCcc
Confidence 776654 34667788888888888877 21 00 00000 00 0 00110
Q ss_pred --E----EEEEEec--------CCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 217 --F----NAVEFDK--------TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 217 --~----~~i~~~~--------~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
+ +.+..+. ...+..+..+.+.|.++||.+...+...+|++++..+|+++++.++++|+++.+ .+.
T Consensus 489 ~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~-~~~ 567 (730)
T 1c4k_A 489 YYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQR-LIE 567 (730)
T ss_dssp EEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred cccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH-hcc
Confidence 1 3343321 112346788999999999999887788999999999999999999999999987 663
No 228
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.51 E-value=2.3e-13 Score=132.15 Aligned_cols=229 Identities=14% Similarity=0.059 Sum_probs=147.1
Q ss_pred CHHHHHHHHHhcCC-------cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc
Q 021893 46 DITALEKIFKESGD-------QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW 117 (306)
Q Consensus 46 d~~~le~~i~~~~~-------~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~ 117 (306)
|++.|+++|++++. ++++++++.+ +++|.+.+ +++|.++|++||++|++||+|++....+..+ ....
T Consensus 291 d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d----l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~ 365 (755)
T 2vyc_A 291 QPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN----AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYA 365 (755)
T ss_dssp SHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC----HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSS
T ss_pred CHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC----HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcch
Confidence 89999999986422 1235555544 46888888 9999999999999999999997421111111 0111
Q ss_pred -CC--CCC------cEEEecccccCCcccceeeEeCHH--HH--hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---c
Q 021893 118 -EE--VRP------DMVILGKALGGGVIPVSAVLADKE--VM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---E 180 (306)
Q Consensus 118 -~~--~~~------d~~s~sK~~~~G~~~~g~~~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~ 180 (306)
.+ .+. -+.|++|+++|-- ..|+++.+++ .+ ..+... ....+.+.+.+.+++..++++.+.. +
T Consensus 366 ~~g~~aD~~~~~~iv~~S~hK~L~g~~-~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~ 444 (755)
T 2vyc_A 366 MRGEPGDHNGPTVFATHSTHKLLNALS-QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGL 444 (755)
T ss_dssp SCSCCCCCSSBEEEEEEETTTSSSCCT-TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHH
T ss_pred hcCCcCCccCCCeEEEECccccccCcC-CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHH
Confidence 22 222 2347889986433 4566766543 11 111110 1122334567777777788887755 3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhC---CCcee------eEEE--------------------------------------
Q 021893 181 KLAERSAHLGEELRQHLFKIQQQF---PNYVK------EVRG-------------------------------------- 213 (306)
Q Consensus 181 ~~~~~~~~~~~~l~~~L~~~~~~~---~~~~~------~~~~-------------------------------------- 213 (306)
++.++..++.+++++.|+++...+ ..+.. ....
T Consensus 445 ~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 524 (755)
T 2vyc_A 445 SLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDI 524 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccccccccc
Confidence 478889999999999999875410 00100 0000
Q ss_pred -ee------eEEEEEEecCC-------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 021893 214 -RG------LFNAVEFDKTA-------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLEL 279 (306)
Q Consensus 214 -~g------~~~~i~~~~~~-------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~ 279 (306)
.| ..+.+..+... .+..+..+.+.|.++||.+...+.+.+|++++..+|+++++.++++|.++.+
T Consensus 525 ~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~- 603 (755)
T 2vyc_A 525 PDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR- 603 (755)
T ss_dssp CTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHH-
T ss_pred CCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHH-
Confidence 11 23344443211 1244578999999999999877789999999999999999999999998877
Q ss_pred hc
Q 021893 280 DL 281 (306)
Q Consensus 280 ~~ 281 (306)
.+
T Consensus 604 ~~ 605 (755)
T 2vyc_A 604 HY 605 (755)
T ss_dssp HH
T ss_pred hh
Confidence 65
No 229
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.49 E-value=2e-13 Score=122.02 Aligned_cols=209 Identities=10% Similarity=0.008 Sum_probs=142.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI 126 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s 126 (306)
++.++..++ +++++|.+.++.+.+|.+.| + +|+++|+++++|.+|+ + ...++..+.++ ..+++
T Consensus 142 ~~~~~~~i~---~~t~lV~~~h~et~tG~~~p----i-----i~~~~~~~~~vD~~q~-~--g~~~id~~~~~--~~~~s 204 (377)
T 3e77_A 142 PDPSTWNLN---PDASYVYYCANETVHGVEFD----F-----IPDVKGAVLVCDMSSN-F--LSKPVDVSKFG--VIFAG 204 (377)
T ss_dssp CCGGGCCCC---TTCSCEEEESEETTTTEECS----S-----CCCCTTCCEEEECTTT-T--TSSCCCGGGCS--EEEEE
T ss_pred CChHHhccC---CCccEEEEeCccCchheEch----h-----hhccCCCEEEEEcccc-c--CCCCCchhhcC--EEEEe
Confidence 444544443 57889999988888999887 5 4789999999999998 2 12234444444 23445
Q ss_pred ecccccCCcccceeeEeCHHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHH
Q 021893 127 LGKALGGGVIPVSAVLADKEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLG 190 (306)
Q Consensus 127 ~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~ 190 (306)
.-|.+| .. ++|+++.++++++.+.+.. .....+++..++.++.++++++.+. .+.++.+++.
T Consensus 205 ~~K~~g-p~-G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~ 282 (377)
T 3e77_A 205 AQKNVG-SA-GVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKS 282 (377)
T ss_dssp GGGTTS-CT-TCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cccccC-CC-ccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 559994 55 7788999988766554321 1112355667777888999988664 3567777888
Q ss_pred HHHHHHHHHHHhhCCCceee---E-EEeeeEEEEEEecCCChhh-HHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCH
Q 021893 191 EELRQHLFKIQQQFPNYVKE---V-RGRGLFNAVEFDKTALPVS-AYDICLKMKERGILAKPTH--DTIVRLTPPLSISS 263 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~---~-~~~g~~~~i~~~~~~~~~~-~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~ 263 (306)
+++++.|+++. +.... . ...+..+.|.++......+ ...+.+.+.++||.+.++. .+.+|+++...+|+
T Consensus 283 ~~l~~~L~~~~----g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~ 358 (377)
T 3e77_A 283 QTIYEIIDNSQ----GFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTI 358 (377)
T ss_dssp HHHHHHHHTST----TSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCH
T ss_pred HHHHHHHHhcC----CceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCH
Confidence 88888887652 11111 1 1234457777764211111 2467888889999987752 36799999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 021893 264 NELQEGSKALHDVLE 278 (306)
Q Consensus 264 ~~i~~~~~~l~~~l~ 278 (306)
+||+.+++.|+++++
T Consensus 359 edId~l~~al~~~~~ 373 (377)
T 3e77_A 359 EDVQKLAAFMKKFLE 373 (377)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999887
No 230
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.47 E-value=6.9e-13 Score=120.61 Aligned_cols=178 Identities=12% Similarity=0.076 Sum_probs=118.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEP----IQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~----~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
.|+++|+++++++ +++++|++++ ++|++|.+.+ +++|.++|++ +|+++++|++|+.+.....+. .+
T Consensus 162 ~D~e~l~~~l~~~-~~tklV~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~---~~ 233 (427)
T 3i16_A 162 PNLEEIEKVLKED-ESITLVHIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT---DV 233 (427)
T ss_dssp CCHHHHHHHHHTC-TTEEEEEEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG---GG
T ss_pred cCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCCcc---cc
Confidence 5899999999853 4799999999 8899988776 9999999999 999999999998442111111 12
Q ss_pred CCCCcEEEecccccC-C-cccceeeEeCHHHHhhcCCC--CccC-CCCCCHHH-HHHHHHHHHHHhhccHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGG-G-VIPVSAVLADKEVMLCIQPG--EHGS-TFGGNPLA-SAVAIASLDVIRDEKLAERSAHLGEE 192 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~-G-~~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~~~~-~~aa~~al~~~~~~~~~~~~~~~~~~ 192 (306)
+.+..+.|++|.++| | . +.|++++++++++.++.. .... ...++... ...+...++.+ ....++..+++..
T Consensus 234 gaDiv~~S~sK~lgg~g~~-~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~--~~r~~~~~~~a~~ 310 (427)
T 3i16_A 234 GADLIAGSLIKNIGGGIAP-TGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLA--PHISMEALKGAIL 310 (427)
T ss_dssp TCSEEEEETTSGGGTTTCC-SCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCeEEEecCcccCCCCCCc-eEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 333334588899985 3 4 668999999998877641 1111 11111122 23333444433 2346677788888
Q ss_pred HHHHHHHHHhhCCCceeeEEEeee-----EEEEEEecCCChhhHHHHHHHHHHCC
Q 021893 193 LRQHLFKIQQQFPNYVKEVRGRGL-----FNAVEFDKTALPVSAYDICLKMKERG 242 (306)
Q Consensus 193 l~~~L~~~~~~~~~~~~~~~~~g~-----~~~i~~~~~~~~~~~~~~~~~l~~~G 242 (306)
+++.|++.... + .++.+. ++.+.+.+ ......|++.|....
T Consensus 311 la~~L~~~g~~----V--~p~~~~~~~~~i~~i~l~~---~~~~~~f~~~l~~~~ 356 (427)
T 3i16_A 311 CSRIMELAGFE----V--MPKYDEKRSDIIQSIKFND---KDKLIEFCKGIQTGS 356 (427)
T ss_dssp HHHHHHHTTCE----E--ESCTTSCCSSSCEEEECSS---HHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCe----e--cCCCCCCCccEEEEEEECC---HHHHHHHHHHHhhcC
Confidence 88888876421 1 222333 77777763 456778999998873
No 231
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.45 E-value=5.5e-14 Score=126.27 Aligned_cols=209 Identities=9% Similarity=-0.017 Sum_probs=139.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~ 124 (306)
++++++++++ +++++|.+.++.+.+|.+ .+ +++|. +|+++++|.+|+ + ...++..+.++ .++
T Consensus 155 ~~~~~~~~l~---~~t~lV~~~h~et~tG~~i~p----i~~i~-----~g~~~~vDa~qs-~--g~~pidv~~~~--~~~ 217 (386)
T 3qm2_A 155 VKPMREWQLS---DNAAYLHYCPNETIDGIAIDE----TPDFG-----PEVVVTADFSST-I--LSAPLDVSRYG--VIY 217 (386)
T ss_dssp ECCGGGCCCC---TTCSCEEECSEETTTTEECCC----CCCCC-----TTCCEEEECTTT-T--TSSCCCGGGCS--EEE
T ss_pred CchHHHhhcC---CCCcEEEEECCcCCcCEecCc----hhhhc-----CCCEEEEEcccc-c--CCCCCCccccC--EEE
Confidence 3455665555 578899999999999986 66 66664 899999999998 2 11234344443 345
Q ss_pred EEecccccCCcccceeeEeCHHHHhhcCCCCc-----------c-CCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHH
Q 021893 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------G-STFGGNPLASAVAIASLDVIRDE----KLAERSAH 188 (306)
Q Consensus 125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~ 188 (306)
++.-|.+| .. ++|++++++++++.+.+... . ...+.|..++.+..++++++.+. ++.++.++
T Consensus 218 ~s~hK~lG-P~-G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~ 295 (386)
T 3qm2_A 218 AGAQKNIG-PA-GLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQ 295 (386)
T ss_dssp EETTTTTC-CT-TEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EecccccC-CC-ccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 55559995 54 78899999988765553210 0 11134556777777888877654 35667777
Q ss_pred HHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHH
Q 021893 189 LGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNE 265 (306)
Q Consensus 189 ~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~ 265 (306)
+.+++++.|+++.. +. ..... ......+.+.++.. +.+ .++...|.++||.+..+. .+.+|+++...+|++|
T Consensus 296 l~~~l~~~l~~~~~-~~-~~~~~~~rs~~iv~f~~~~~--~~~-~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~ed 370 (386)
T 3qm2_A 296 KAELLYGVIDNSDF-YR-NDVAQANRSRMNVPFQLADN--TLD-KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEG 370 (386)
T ss_dssp HHHHHHHHHHTCSS-EE-CCBCGGGBCSSEEEEEESSG--GGH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHCCC-cc-cCCCHHHcCceEEEEECCCc--ccc-HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHH
Confidence 88888888876521 00 00011 12334667777631 234 677888999999987652 2569999999999999
Q ss_pred HHHHHHHHHHHHh
Q 021893 266 LQEGSKALHDVLE 278 (306)
Q Consensus 266 i~~~~~~l~~~l~ 278 (306)
|+.+++.|+++.+
T Consensus 371 Id~l~~~l~~~~~ 383 (386)
T 3qm2_A 371 VKALTDFMIDFER 383 (386)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 232
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.45 E-value=1.2e-12 Score=118.95 Aligned_cols=177 Identities=12% Similarity=0.039 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccC
Q 021893 45 GDITALEKIFKESGDQIAGFLFEP----IQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWE 118 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~----~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~ 118 (306)
.|+++++++++++ +++++|++++ ++|++|.+.+ +++|.++|++ +|+++++|++|+.+.....+. .+
T Consensus 162 ~d~e~l~~~i~~~-~~tklV~i~~s~gyp~nptg~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~---~~ 233 (427)
T 3hvy_A 162 VDINTVKEELKKD-DSIKLIHIQRSTGYGWRKSLRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT---DV 233 (427)
T ss_dssp CCHHHHHHHHHHC-TTEEEEEEESSCCSSSSCCCCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG---GG
T ss_pred cCHHHHHHHhhCC-CCCEEEEEECCCCCCCCccccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCCCc---cc
Confidence 6899999999853 4799999999 8898887766 9999999999 899999999997432111221 12
Q ss_pred CCCCcEEEecccccCC--cccceeeEeCHHHHhhcCCC--CccCCC-CCCHHH-HHHHHHHHHHHhhccHHHHHHHHHHH
Q 021893 119 EVRPDMVILGKALGGG--VIPVSAVLADKEVMLCIQPG--EHGSTF-GGNPLA-SAVAIASLDVIRDEKLAERSAHLGEE 192 (306)
Q Consensus 119 ~~~~d~~s~sK~~~~G--~~~~g~~~~~~~~~~~~~~~--~~~~~~-~~~~~~-~~aa~~al~~~~~~~~~~~~~~~~~~ 192 (306)
+.+..+.|++|.++|+ . +.|++++++++++.++.. ...... .+.++. ...+...++.. ....++..++...
T Consensus 234 gaDiv~~S~sK~lgg~g~~-~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~ 310 (427)
T 3hvy_A 234 GADIIAGSLIKNIGGGIAT-TGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVF 310 (427)
T ss_dssp TCSEEEEETTSGGGTTTCC-SCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCeEEEECCcccccccccc-eEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHH
Confidence 3333345889999954 3 568999999998877541 111111 111111 33333444433 2346677788888
Q ss_pred HHHHHHHHHhhCCCceeeEEEeee-----EEEEEEecCCChhhHHHHHHHHHHC
Q 021893 193 LRQHLFKIQQQFPNYVKEVRGRGL-----FNAVEFDKTALPVSAYDICLKMKER 241 (306)
Q Consensus 193 l~~~L~~~~~~~~~~~~~~~~~g~-----~~~i~~~~~~~~~~~~~~~~~l~~~ 241 (306)
+++.|++.+.. + .++... ++++.+.+ ......|++.|...
T Consensus 311 la~~L~~~g~~----V--~p~~~~~~~~li~~~~l~~---~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 311 CARIMELAGFD----V--LPKYNDKRTDIIQAIKFND---EKKLIDFIKGIQTA 355 (427)
T ss_dssp HHHHHHHTTCE----E--ESCTTSCCSSSEEEEECSS---HHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCe----e--cCCCCCCCceEEEEEeCCC---HHHHHHHHHHhccc
Confidence 88888876421 1 222222 67777753 45677889999876
No 233
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.38 E-value=1.5e-11 Score=111.43 Aligned_cols=263 Identities=13% Similarity=0.071 Sum_probs=149.8
Q ss_pred EEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHH
Q 021893 7 SCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLK 84 (306)
Q Consensus 7 ~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~ 84 (306)
++..+-|-...-++.+.+-. .+.. |.+.+. .. .-|++.||++|++++ +.+.+|+.+|.++.+|..-+ |+
T Consensus 148 iv~r~aHkSv~kAl~l~Gl~p~~v~---~~~~~~-~~-~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd----l~ 218 (450)
T 3bc8_A 148 IWPRIDQKSCFKSMVTAGFEPVVIE---NVLEGD-EL-RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LE 218 (450)
T ss_dssp EEECCCCHHHHHHHHHTTCEEEEEC---CEEETT-EE-ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HH
T ss_pred EEECCcHHHHHHHHHHcCCeeEEEE---eeecCc-cC-CcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC----HH
Confidence 33455666666666655521 1111 111111 11 128999999999875 46777888777766666667 99
Q ss_pred HHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCcEEEec--ccccCCcccceeeEe-CHHHHhhcCCCCccCCC
Q 021893 85 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTF 160 (306)
Q Consensus 85 ~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d~~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~ 160 (306)
+|.++|++||++|++|++|++..+....+..+.... ..|.++.| |.+...+ ..+++.. +++..+.+.........
T Consensus 219 ~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~-~~~~l~~rd~~~~~~~~~~~~g~~s 297 (450)
T 3bc8_A 219 ELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPV-GGAIIAGFNEPFIQDISKMYPGRAS 297 (450)
T ss_dssp HHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCS-SCEEEEESCHHHHHHHHHHSCSCBC
T ss_pred HHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchh-ccEEEEecCHHHHHHHHHHhhcCCc
Confidence 999999999999999999985322211111111111 46877666 8887655 6666776 56666555332111111
Q ss_pred CCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC--CChhhHHHHH
Q 021893 161 GGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT--ALPVSAYDIC 235 (306)
Q Consensus 161 ~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~ 235 (306)
..+++. ...++..+..+. +.++..++.+++++.++++...+...+...+..+.-..+.+... ....+...+.
T Consensus 298 --~SpsL~-l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~ 374 (450)
T 3bc8_A 298 --ASPSLD-VLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLG 374 (450)
T ss_dssp --SHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHH
T ss_pred --ccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeE
Confidence 122222 222222222222 34444677889999998887554322222221111112222210 0123455666
Q ss_pred HHHHHCC---ceec---------------------cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893 236 LKMKERG---ILAK---------------------PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283 (306)
Q Consensus 236 ~~l~~~G---i~~~---------------------~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~ 283 (306)
-.+...| .-+. -....++-+..+...+++|++.++++|+++++ .+++
T Consensus 375 i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~-~~~~ 445 (450)
T 3bc8_A 375 SMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN-IVRK 445 (450)
T ss_dssp HHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred EEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 6665553 2222 23457788888899999999999999999887 6643
No 234
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.37 E-value=5.4e-12 Score=112.27 Aligned_cols=198 Identities=10% Similarity=0.030 Sum_probs=134.2
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCcc
Q 021893 59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVI 136 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~ 136 (306)
+++++|.+.++.+.+|.+.+. +++ +|+++++|.+|+ ++ ...+..+ . .|++++| |.+| ..
T Consensus 139 ~~t~lv~~~~~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g--~~~id~~--~--~d~~~~s~~K~~g-p~- 199 (361)
T 3m5u_A 139 DNADYAYICSNNTIYGTQYQN---------YPK-TKTPLIVDASSD-FF--SRKVDFS--N--IALFYGGVQKNAG-IS- 199 (361)
T ss_dssp TTSSEEEEESEETTTTEECSS---------CCC-CSSCEEEECGGG-TT--SSCCCCT--T--EEEEEEETTTTSS-CT-
T ss_pred CCCCEEEEeCCCCCcceeCCc---------ccc-cCCEEEEEcccc-cC--CCCCCcc--c--CCEEEEechhccC-CC-
Confidence 578889998888888987551 333 499999999998 21 1222222 2 4666555 9995 54
Q ss_pred cceeeEeCHHHHhhcCCC-------------CccCCCCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHH
Q 021893 137 PVSAVLADKEVMLCIQPG-------------EHGSTFGGNPLASAVAIASLDVIRDE-K---LAERSAHLGEELRQHLFK 199 (306)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~~l~~~L~~ 199 (306)
++|+++.++++.+.+.+. ......+.+..++.++.++++++.+. + +.++.+++.+++++.|++
T Consensus 200 G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~ 279 (361)
T 3m5u_A 200 GLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL 279 (361)
T ss_dssp TCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999988766431 01112355777888888999988765 3 567777888888888876
Q ss_pred HHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893 200 IQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDV 276 (306)
Q Consensus 200 ~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~ 276 (306)
+...+. ..... ......+.+.++... ..+ .++...|.++||.+..+. .+.+|++++..+|++||+.+++.|+++
T Consensus 280 ~~g~~~-~~~~~~~rs~~ivsf~~~~~~-~~~-~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~ 356 (361)
T 3m5u_A 280 SNGFYK-GHADKKDRSLMNVSFNIAKNK-DLE-PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEF 356 (361)
T ss_dssp STTSEE-ESSCGGGBCSSEEEEEESSCT-THH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCeee-ccCCHHHcCCeEEEEECCCch-hhh-HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 531100 00011 112345677766310 233 478889999999987753 256999999999999999999999998
Q ss_pred Hh
Q 021893 277 LE 278 (306)
Q Consensus 277 l~ 278 (306)
.+
T Consensus 357 ~~ 358 (361)
T 3m5u_A 357 QG 358 (361)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 235
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.34 E-value=5.7e-11 Score=113.87 Aligned_cols=228 Identities=11% Similarity=0.044 Sum_probs=144.9
Q ss_pred CHHHHHHHHHhcCCc--EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc--CCC
Q 021893 46 DITALEKIFKESGDQ--IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW--EEV 120 (306)
Q Consensus 46 d~~~le~~i~~~~~~--~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~--~~~ 120 (306)
|++.||++++++++. +++++++.+ +++|.+.+ +++|.++|++++ +++||+|++....+..+. ... .+.
T Consensus 281 d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d----l~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~ 353 (715)
T 3n75_A 281 QHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN----TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGR 353 (715)
T ss_dssp SHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC----HHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSC
T ss_pred CHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC----HHHHHHHhCcCc--EEEccccccccccCCccccccccccCc
Confidence 899999999976421 224555444 78898888 999999998774 799999984211122111 111 111
Q ss_pred CCc-----EEEecccccCCcccceeeEeCHHHH-hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q 021893 121 RPD-----MVILGKALGGGVIPVSAVLADKEVM-LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLG 190 (306)
Q Consensus 121 ~~d-----~~s~sK~~~~G~~~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~ 190 (306)
.+| +.|++|++++-- ..|++.++.++. +.+... ....+.+.+.+.+++..++++.+.. +++.+++.++.
T Consensus 354 ~aD~vii~~~S~hKtL~glt-qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a 432 (715)
T 3n75_A 354 VEGKVIYETQSTHKLLAAFS-QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERA 432 (715)
T ss_dssp CTTCEEEEEECHHHHSSCCT-TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecccccccCCC-CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 244 347789987532 456677754421 111111 1223445677888888889888763 45789999999
Q ss_pred HHHHHHHHHHHhhCCCceeeEEE-------------------------ee------eEEEEEEecCC-------ChhhHH
Q 021893 191 EELRQHLFKIQQQFPNYVKEVRG-------------------------RG------LFNAVEFDKTA-------LPVSAY 232 (306)
Q Consensus 191 ~~l~~~L~~~~~~~~~~~~~~~~-------------------------~g------~~~~i~~~~~~-------~~~~~~ 232 (306)
+++++.|+++....+++...+.+ .+ .=+.+..+... .+..+.
T Consensus 433 ~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~ 512 (715)
T 3n75_A 433 IKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPAS 512 (715)
T ss_dssp HHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHH
T ss_pred HHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHH
Confidence 99999999986421111101000 00 11122222110 134567
Q ss_pred HHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893 233 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 282 (306)
Q Consensus 233 ~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~ 282 (306)
.+.+.|.++||.+.-.+...+-+.++...++++++.++++|.++-+ .+.
T Consensus 513 ~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~-~~~ 561 (715)
T 3n75_A 513 IVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR-AFD 561 (715)
T ss_dssp HHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHHH-Hhh
Confidence 8899999999999988888888888889999999999999987765 443
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.86 E-value=1.1e-07 Score=85.30 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=133.1
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 124 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~ 124 (306)
|.+.++++.+++ ++++|++-.... ....+ .++++++|++.|.+|++|-+|. |+...|. ++.+ +.. .|+
T Consensus 191 Dyd~~~~~A~~~--kPklIi~G~SaY--~r~id----~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~-~psP-~~~-ADv 259 (490)
T 3ou5_A 191 DYNQLALTARLF--RPRLIIAGTSAY--ARLID----YARMREVCDEVKAHLLADMAHISGLVAAKV-IPSP-FKH-ADI 259 (490)
T ss_dssp CHHHHHHHHHHH--CCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTS-SCCG-GGT-CSE
T ss_pred cHHHHHHHHhhc--CCCeEEECCccC--ccccC----HHHHHHHHhhcccEEEechhhhhhhhcccc-cCCc-ccc-ceE
Confidence 789999999986 577777755332 23556 9999999999999999999996 6643343 2222 222 588
Q ss_pred EEec--ccccCCcccceeeEeCHH---------------HHhhcCCCCccCCCCCCHH-HHHHHHHHHHHHhh---ccHH
Q 021893 125 VILG--KALGGGVIPVSAVLADKE---------------VMLCIQPGEHGSTFGGNPL-ASAVAIASLDVIRD---EKLA 183 (306)
Q Consensus 125 ~s~s--K~~~~G~~~~g~~~~~~~---------------~~~~~~~~~~~~~~~~~~~-~~~aa~~al~~~~~---~~~~ 183 (306)
++.+ |.|.|. |-|.+..+++ +.+++......+...++-+ .+++...++....+ .++.
T Consensus 260 VTtTTHKTLrGP--rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya 337 (490)
T 3ou5_A 260 VTTTTHKTLRGA--RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS 337 (490)
T ss_dssp EEEESSSTTCSC--SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EeccccccccCC--CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHH
Confidence 7655 999743 5666777652 2222221111111122222 22232233444333 3467
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----CCCEEE
Q 021893 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----HDTIVR 254 (306)
Q Consensus 184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----~~~~lR 254 (306)
+++.++.+.|.+.|.+.+.. +..-.-...++.+++.+. +....+..+.|-+.||.+- |. .+..||
T Consensus 338 ~qVv~NAkaLA~~L~~~G~~----vvsGgTdnHlvLvDl~~~--g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiR 411 (490)
T 3ou5_A 338 LQVLKNARAMADALLERGYS----LVSGGTDNHLVLVDLRPK--GLDGARAERVLELVSITANKNTCPGDRSAITPGGLR 411 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCE----EGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred HHHHHHHHHHHHHHHhCCCe----eecCCCCceEEEEecccc--CCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeE
Confidence 88888888888888887522 111122445566666542 3456667777778898875 22 345799
Q ss_pred EeCC----CCCCHHHHHHHHHHHHHHHh
Q 021893 255 LTPP----LSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 255 i~~~----~~~t~~~i~~~~~~l~~~l~ 278 (306)
|..+ ....++|++++.+.|.+++.
T Consensus 412 iGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 412 LGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9865 35678899998888888775
No 237
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=66.65 E-value=9.2 Score=28.68 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHH-HHHHHcCCEEE-Eehhhh
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR-DLCSKYNILMI-ADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~-~l~~~~gi~li-~De~~~ 104 (306)
.+.+.|.++++++ ++..++|.-+.++.|.........+... .++.++++.++ +||-++
T Consensus 42 ~~~~~l~~li~~~--~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 42 YGLSRLSELIKDY--TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp CCHHHHHHHHTTS--EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHHHHc--CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 4689999999974 6777777766665554322111112222 44555687665 799887
No 238
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=62.12 E-value=26 Score=23.08 Aligned_cols=48 Identities=13% Similarity=0.020 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..+..+.++. .+..++++-..- +++..+.+..+|++++++++.-....
T Consensus 16 ~~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~lc~~~~Ip~~~v~sk~ 63 (82)
T 3v7e_A 16 TKQTVKALKR--GSVKEVVVAKDA--------DPILTSSVVSLAEDQGISVSMVESMK 63 (82)
T ss_dssp HHHHHHHHTT--TCEEEEEEETTS--------CHHHHHHHHHHHHHHTCCEEEESCHH
T ss_pred HHHHHHHHHc--CCeeEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 3456667764 467777775553 33568999999999999999765444
No 239
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=49.23 E-value=37 Score=23.14 Aligned_cols=43 Identities=7% Similarity=-0.002 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.+...+.|+. .+.+++++-... +++..+.+..+|.+++++++.
T Consensus 20 ~~~v~kai~~--gka~lViiA~D~--------~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 20 SNETIRLAKT--GGAKLIIVAKNA--------PKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp HHHHHHHHHH--TCCSEEEEECCC--------CHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHc--CCccEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 4566777775 356667665542 456689999999999999753
No 240
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=46.64 E-value=45 Score=26.28 Aligned_cols=43 Identities=26% Similarity=0.360 Sum_probs=32.4
Q ss_pred HHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 53 IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 53 ~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+.+--+-.+++++||-..+..|.... ++++.+++++||+.++.
T Consensus 152 LarLAGl~Pa~vicEi~~~~dG~mar----~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 152 LSTLAGLQPAGVICELVRDEDGLMMR----LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp HHHHTTSCSBEEEEEBBCTTTCCBCB----HHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEeECCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 33333456889999988455565555 99999999999999884
No 241
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=46.13 E-value=40 Score=23.04 Aligned_cols=43 Identities=5% Similarity=-0.124 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.+.+.+.|+. .+..++++-... +++..+.+..+|++++++++.
T Consensus 21 ~~~v~kai~~--gka~lViiA~D~--------~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKM--GGAKLIIVARNA--------RPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHH--TCCSEEEEETTS--------CHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHc--CCCcEEEEeCCC--------CHHHHHHHHHHHHhcCCCEEE
Confidence 4566777775 356666665542 456689999999999999764
No 242
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=45.63 E-value=13 Score=24.71 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.=++|+++++++|++++.|....
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 336899999999999999998765
No 243
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=44.59 E-value=62 Score=27.38 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhcCCc-EEEEEEccccCCCCcccC--ChhHHHHHHHHHHHcCCEEEEeh
Q 021893 46 DITALEKIFKESGDQ-IAGFLFEPIQGEAGVIIP--PDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 46 d~~~le~~i~~~~~~-~~~v~v~~~~~~~G~~~~--~~~~l~~i~~l~~~~gi~li~De 101 (306)
+.++++.+.++.+-+ +|+-+- +. .+|.... -.+.++++.+.|+++|+.+|+|-
T Consensus 70 ~~~~~~~l~~~~G~N~VRi~~~-~~--~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 70 NKDSLKWLRDDWGITVFRAAMY-TA--DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp SHHHHHHHHHHTCCSEEEEEEE-SS--TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEeE-EC--CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 456676655554433 566553 22 1222211 13668899999999999999984
No 244
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=44.00 E-value=34 Score=23.42 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=28.4
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHH-HHHHHHcCCEEE-Eehhhh
Q 021893 46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAV-RDLCSKYNILMI-ADEIQS 104 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i-~~l~~~~gi~li-~De~~~ 104 (306)
+++.|+++++++ ++..+++=-+.++.|..-+..+..++. .++.++ ++.+. +||-++
T Consensus 39 ~~~~l~~li~e~--~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRRE--GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHH--TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECCSCC
T ss_pred HHHHHHHHHHHc--CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECCCCC
Confidence 578899999986 344444433333333332222222222 222334 77765 888654
No 245
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=41.07 E-value=18 Score=32.30 Aligned_cols=28 Identities=7% Similarity=0.236 Sum_probs=25.1
Q ss_pred cCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 77 IPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 77 ~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..+++.++++++-||++||-||+|-|.-
T Consensus 73 ~Gt~~df~~lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 73 SGNEDEFRNMVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3467889999999999999999999985
No 246
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=40.32 E-value=55 Score=22.79 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
.+.+.+.|+. .+..+|++-..- +++....|..+|++++++++
T Consensus 26 ~~~v~kai~~--gka~lViiA~D~--------~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKH--GEGKLVVLAGNI--------PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHT--TCCSEEEECTTC--------BHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEE
Confidence 4566677774 356677665442 45668999999999999965
No 247
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=39.96 E-value=19 Score=31.49 Aligned_cols=26 Identities=15% Similarity=0.118 Sum_probs=21.0
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
-.+.+++|.+.|+++|+-+++|=.-.
T Consensus 72 ~~~~~~~l~~~a~~~g~~vi~DVsp~ 97 (385)
T 1x7f_A 72 IVAEFKEIINHAKDNNMEVILDVAPA 97 (385)
T ss_dssp --HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 35669999999999999999996554
No 248
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=38.96 E-value=19 Score=24.51 Aligned_cols=24 Identities=21% Similarity=0.167 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.=++|+++++++|++++.|....
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHHH
Confidence 446899999999999999998765
No 249
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=38.85 E-value=60 Score=22.13 Aligned_cols=44 Identities=16% Similarity=0.142 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.+.+.+.|+. .+.++|++-..- ++...+.+..+|.+++++++.-
T Consensus 23 ~~~v~kai~~--gka~lViiA~D~--------~~~~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 23 EEQVVKAVQN--GQVTLVILSSDA--------GIHTKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp HHHHHHHHHT--TCCSEEEEETTS--------CHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHc--CCCcEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEe
Confidence 4566777775 456666665543 2344888999999999998753
No 250
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=38.20 E-value=18 Score=24.85 Aligned_cols=24 Identities=13% Similarity=0.104 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.=++|+++++++|++++.|....
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHHH
Confidence 446889999999999999998765
No 251
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=37.83 E-value=71 Score=22.69 Aligned_cols=48 Identities=8% Similarity=0.079 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.....+.|+. .+..+|++-..-++ .+....+..+|++++++++.-...
T Consensus 25 ~~~v~kai~~--gkakLViiA~D~~~-------~~~~~~l~~lc~~~~VP~~~v~sk 72 (121)
T 2lbw_A 25 VKEVVKALRK--GEKGLVVIAGDIWP-------ADVISHIPVLCEDHSVPYIFIPSK 72 (121)
T ss_dssp HHHHHHHHHH--SCCCEEEECTTCSC-------TTHHHHHHHHHHHTCCCEEECCCH
T ss_pred HHHHHHHHHc--CCceEEEEeCCCCH-------HHHHHHHHHHHHhcCCcEEEECCH
Confidence 4556667775 46777777655432 234788899999999999754333
No 252
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=37.66 E-value=38 Score=21.97 Aligned_cols=48 Identities=13% Similarity=0.018 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHHHCCceecc-CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 228 PVSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~~~~-~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
..+++.+...|...|+-..- ...++.|+.+..+.++++.+.+++.|++
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 45788899999988854221 2345667776677788899999998876
No 253
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=37.51 E-value=87 Score=24.69 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=30.4
Q ss_pred HHHHHHHhc-CCcEEEEEEccccCC---CCcc-cCChhHHHHHHHHHHHcCCEEE
Q 021893 49 ALEKIFKES-GDQIAGFLFEPIQGE---AGVI-IPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 49 ~le~~i~~~-~~~~~~v~v~~~~~~---~G~~-~~~~~~l~~i~~l~~~~gi~li 98 (306)
.|++.++.. ......|++.|+... .|.. ....++-+.+.++|+++++.+|
T Consensus 113 ~l~~~i~~~~~~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 113 YLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 355555531 123567778775322 1321 2345678899999999998876
No 254
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=36.79 E-value=1.1e+02 Score=21.75 Aligned_cols=51 Identities=2% Similarity=0.109 Sum_probs=31.4
Q ss_pred ccccCCCHHHHHHHHHh----cC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 40 LKVDFGDITALEKIFKE----SG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~----~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
+..+..|++.+.+.|++ .+ ..+.++=+.... .... +.+|.++|+++|+.+|
T Consensus 20 l~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~d----l~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 20 VHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVN----WPELHKIVTSTGLRII 78 (120)
T ss_dssp EEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCC----HHHHHHHHHTTTCEEE
T ss_pred EEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHH----HHHHHHHHHHcCCEEE
Confidence 45556688777666664 21 122233243332 1234 9999999999999986
No 255
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=36.38 E-value=20 Score=24.67 Aligned_cols=24 Identities=25% Similarity=0.185 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..=++|+++++++|++++.|....
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHHH
Confidence 346899999999999999998765
No 256
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=36.38 E-value=76 Score=21.64 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEeh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De 101 (306)
.+.+.+.|+. .+.++|++-..- ++...+.+..+|++++++++.-.
T Consensus 24 ~~~v~kai~~--gka~lViiA~D~--------~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 24 EDLVIKEIRN--ARAKLVLLTEDA--------SSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp HHHHHHHHHT--TCCSEEEEETTS--------CHHHHHHHHHHHHHTTCCEEEES
T ss_pred hhhhHHHHhc--CceeEEEEeccc--------cccchhhhcccccccCCCeeeec
Confidence 4567777875 456666665543 23348889999999999987543
No 257
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=36.28 E-value=63 Score=25.23 Aligned_cols=19 Identities=16% Similarity=0.447 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHcCCEEE
Q 021893 80 DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li 98 (306)
.++-+.+.++|+++++.++
T Consensus 160 ~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 160 SDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 6678889999999998775
No 258
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=36.25 E-value=56 Score=26.89 Aligned_cols=53 Identities=15% Similarity=0.229 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCccc---------CChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVII---------PPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~---------~~~~~l~~i~~l~~~~gi~li~ 99 (306)
++.+++.+++...+-+=++|-|-...+|... .+.+.++.+.++++++++.+++
T Consensus 39 l~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~ 100 (281)
T 3p8k_A 39 ETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVA 100 (281)
T ss_dssp HHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEE
Confidence 4555666665333333456666555555332 1357899999999999998774
No 259
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=35.22 E-value=46 Score=26.53 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=28.7
Q ss_pred CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+-.+++++|+-.+ ..|.... +.++.+++++||+.+|.
T Consensus 165 Gl~Pa~vicEi~~-~dG~mar----~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 165 GFKPAGVLCELTN-DDGTMAR----APECIEFANKHNMALVT 201 (217)
T ss_dssp TSCSCEEEEEBBC-TTSSBCC----HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEEEeC-CCCCccC----HHHHHHHHHHcCCCEEE
Confidence 3467888888774 3455555 89999999999999984
No 260
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=35.19 E-value=77 Score=20.17 Aligned_cols=47 Identities=9% Similarity=0.057 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHHHCCce--eccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893 228 PVSAYDICLKMKERGIL--AKPTHDTIVRLTPPLSISSNELQEGSKALHD 275 (306)
Q Consensus 228 ~~~~~~~~~~l~~~Gi~--~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 275 (306)
..+++.+...|...|+- +.. +.++-|+.+..+.++++.+.+++.|++
T Consensus 20 ~~~A~~~~~~L~~~g~~~~i~~-~~~~yRV~vGpf~~~~~A~~~~~~L~~ 68 (79)
T 1x60_A 20 KANADSLASNAEAKGFDSIVLL-KDGLYKVQIGAFSSKDNADTLAARAKN 68 (79)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEE-ETTEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEec-CCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 46688899999888753 323 245666666567889999999998876
No 261
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=34.61 E-value=85 Score=21.58 Aligned_cols=42 Identities=5% Similarity=-0.058 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
.+...+.|+. .+.++|++-..- ++...+.+..+|.+++++++
T Consensus 27 ~~~v~kai~~--gkaklVilA~D~--------~~~~~~~i~~~c~~~~ip~~ 68 (105)
T 3u5e_c 27 YKSTVKSLRQ--GKSKLIIIAANT--------PVLRKSELEYYAMLSKTKVY 68 (105)
T ss_dssp HHHHHHHHHT--TCCSEEEECTTS--------CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEE
Confidence 4566777775 456677765543 35568999999999999999
No 262
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=34.56 E-value=1.3e+02 Score=21.77 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.+.+.+.|+. .+.++|++-..-+ +.+..+.+..+|++++++++.-
T Consensus 46 ~~~v~kal~~--gkaklViiA~D~~-------~~~~~~~l~~lc~~~~IP~~~v 90 (135)
T 2aif_A 46 ANEATKALNR--GIAEIVLLAADAE-------PLEILLHLPLVCEDKNTPYVFV 90 (135)
T ss_dssp HHHHHHHHHT--TCEEEEEEETTCS-------CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHc--CCCeEEEEecCCC-------hHHHHhHHHHHHHhcCCcEEEE
Confidence 4566666664 4567777755432 2334689999999999998744
No 263
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=33.38 E-value=1e+02 Score=21.07 Aligned_cols=43 Identities=9% Similarity=-0.021 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.+...+.|+. .+.+++++-..- ++...+.+..+|.+++++++.
T Consensus 27 ~~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRN--GTAKLVFISNNC--------PTVRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHH--TCCCEEEECTTS--------CHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCcEEE
Confidence 4566777775 456777775543 234588899999999999983
No 264
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=32.91 E-value=29 Score=30.88 Aligned_cols=27 Identities=11% Similarity=0.176 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.+.+.++++++.||++||-||+|-+.-
T Consensus 62 Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 62 GNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 457889999999999999999999885
No 265
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=32.86 E-value=33 Score=27.90 Aligned_cols=51 Identities=10% Similarity=0.139 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCC----CCcccCChh---HHHHHHHHHHHcCCEEEEeh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGE----AGVIIPPDG---YLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~----~G~~~~~~~---~l~~i~~l~~~~gi~li~De 101 (306)
.+.++++++. .+..|.+---..+ .|. ....+ ..+++.++|++|++.||+++
T Consensus 46 ~~~~~~al~~---Gv~~vqlR~K~~~~~~~~~~-l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALAG---GVDIIQLRDKGSPGELRFGP-LQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHT---TCSEEEECCTTCHHHHHHCS-CCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHC---CCCEEEEccCCCCccccccC-CCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 5777888873 4555555332211 000 11223 34789999999999998854
No 266
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=32.50 E-value=88 Score=23.67 Aligned_cols=44 Identities=5% Similarity=-0.111 Sum_probs=23.8
Q ss_pred HhcCCcEEEEEEccccCCCCcc---cC-C----hhHHHHHHHHHHHcCCEEE
Q 021893 55 KESGDQIAGFLFEPIQGEAGVI---IP-P----DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 55 ~~~~~~~~~v~v~~~~~~~G~~---~~-~----~~~l~~i~~l~~~~gi~li 98 (306)
++..++++++++.+...+.+.. .. . .++-+.+.++|+++++.++
T Consensus 106 ~~~~p~~~ii~~~~~P~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~v~~i 157 (200)
T 4h08_A 106 RKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIALKHINRASIEVN 157 (200)
T ss_dssp HHHCTTCEEEEECCCCCEESGGGCEECTHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhCCCccEEEeccCCCcccccccccchhHHHHHHHHHHHHHHhhhcceEEE
Confidence 3344667777776532211111 00 1 2334567788999998765
No 267
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=31.84 E-value=89 Score=22.70 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEeh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De 101 (306)
.....+.|+. .+..+|++-..-+ +.+....+..+|+++|++++.-.
T Consensus 37 ~~~v~kai~~--gkakLViiA~D~~-------p~~~~~~l~~lc~~~~VP~~~v~ 82 (134)
T 2ale_A 37 ANEATKTLNR--GISEFIIMAADCE-------PIEILLHLPLLCEDKNVPYVFVP 82 (134)
T ss_dssp HHHHHHHHHH--TCEEEEEEETTCS-------SGGGGTHHHHHHHHHTCCEEEES
T ss_pred chHHHHHHHh--CCCeEEEEeCCCC-------HHHHHHHHHHHHHhcCCCEEEEC
Confidence 4555666665 4677777765432 22347788899999999977543
No 268
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=31.18 E-value=51 Score=25.29 Aligned_cols=18 Identities=11% Similarity=0.124 Sum_probs=13.5
Q ss_pred hHHHHHHHHHHHcCCEEE
Q 021893 81 GYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li 98 (306)
++-+.+.++|+++++.++
T Consensus 163 ~~n~~~~~~a~~~~v~~i 180 (216)
T 2q0q_A 163 ELARVYSALASFMKVPFF 180 (216)
T ss_dssp THHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCcEE
Confidence 456678889999997764
No 269
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=31.10 E-value=1.3e+02 Score=24.07 Aligned_cols=48 Identities=8% Similarity=0.093 Sum_probs=34.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.|.--.+.+-.+-++++++||-.+.. |.... ++++.+++++||+.++.
T Consensus 165 TEaaVdLarlAGl~Pa~VicEi~~dd-G~mar----~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 165 TEMTVALAELANLVPITTICEMMGDD-GNAMS----KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp HHHHHHHHHHTTSCSEEEEEEEBCTT-SSBCC----HHHHHHHHHHHTCCEEE
T ss_pred hHHHHHHHHHcCCCceEEEEEEeCCC-CCcCC----HHHHHHHHHHcCCcEEE
Confidence 33333333333457899999988654 54555 99999999999999984
No 270
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=31.05 E-value=1.4e+02 Score=23.48 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=30.2
Q ss_pred HHhcCCcEEEEEEcc--ccCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 54 FKESGDQIAGFLFEP--IQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 54 i~~~~~~~~~v~v~~--~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
.+-.+-.+++++||- .+. .|.... ++++.+++++||+.++.
T Consensus 152 arlAGl~Pa~vicEiv~~~~-dG~mar----~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 152 ARMAGLQPAGAICEIVSQKD-EGSMAH----TDELRVFADEHGLALIT 194 (206)
T ss_dssp HHHTTSCSBEEEEEBBCSSS-TTSBCC----HHHHHHHHHHHTCEEEE
T ss_pred HHHcCCCceEEEEEEeeeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 333344678899988 543 454555 89999999999999984
No 271
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=30.74 E-value=35 Score=29.92 Aligned_cols=27 Identities=19% Similarity=0.106 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.+.+.++++++.||++|+-||.|-+.-
T Consensus 66 Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 66 GNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 457889999999999999999999886
No 272
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=30.38 E-value=36 Score=28.18 Aligned_cols=22 Identities=32% Similarity=0.372 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHcCCEEEEehh
Q 021893 81 GYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~ 102 (306)
+.++++.++|+++|+.+|.|--
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEec
Confidence 3478899999999999998853
No 273
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=30.36 E-value=69 Score=29.45 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEeh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De 101 (306)
.+.++++++. ....|.+--....... -.+..+++.++|++||+.||+++
T Consensus 28 ~~~ve~al~~---Gv~~vQlR~K~~~~~~---~~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQN---GVTLVQIREKDADTKF---FIEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHT---TCSEEEECCSSSCTTH---HHHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHC---CCCEEEEecCCCCHHH---HHHHHHHHHHHHHhcCCEEEEeC
Confidence 4778888873 4566666444332221 13457788999999999999865
No 274
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=30.20 E-value=34 Score=28.57 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=31.5
Q ss_pred CHHHHHHHHHhcCC-cEEEEEEccccCCCCcccC--ChhHHHHHHHHHHHcCCEEEEehh
Q 021893 46 DITALEKIFKESGD-QIAGFLFEPIQGEAGVIIP--PDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 46 d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~--~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
+-++++.+.++.+- -+|+-+-. . .+|.... -.+.++++.+.|.++|+.+|+|--
T Consensus 45 ~~~~~~~l~~~~G~N~VRip~~~-~--~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H 101 (303)
T 7a3h_A 45 NYESMKWLRDDWGINVFRAAMYT-S--SGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWH 101 (303)
T ss_dssp SHHHHHHHHHHTCCCEEEEEEES-S--TTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEEe-C--CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 34555544434343 35655532 1 1222211 146688899999999999999843
No 275
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=29.89 E-value=38 Score=30.05 Aligned_cols=60 Identities=13% Similarity=0.082 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc-------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV-------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~-------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.... --+.+|.++|++...+. ...+.+.++++++.||++|+-||+|-+.-
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 93 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46666665555321 23667777776433210 12357889999999999999999999874
No 276
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=29.55 E-value=37 Score=30.51 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=41.0
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCC-----C-------------------cccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEA-----G-------------------VIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~-----G-------------------~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++..+.+.|.... --+.+|.++|++... | -...+.+.++++++.||++||-||+|
T Consensus 21 ~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 100 (480)
T 1ud2_A 21 HWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGD 100 (480)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5666666555321 136788888865411 1 12346888999999999999999999
Q ss_pred hhhh
Q 021893 101 EIQS 104 (306)
Q Consensus 101 e~~~ 104 (306)
-+.-
T Consensus 101 ~V~N 104 (480)
T 1ud2_A 101 VVMN 104 (480)
T ss_dssp ECCS
T ss_pred EccC
Confidence 9875
No 277
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=29.33 E-value=37 Score=30.50 Aligned_cols=59 Identities=12% Similarity=0.062 Sum_probs=40.6
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCC-----C-------------------cccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEA-----G-------------------VIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~-----G-------------------~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++..+.+.|.-.. --+.+|.++|++... | -...+.+.++++++.||++||-||+|
T Consensus 19 ~~~gi~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD 98 (483)
T 3bh4_A 19 HWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGD 98 (483)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4566655554321 136778888865411 1 13456888999999999999999999
Q ss_pred hhhh
Q 021893 101 EIQS 104 (306)
Q Consensus 101 e~~~ 104 (306)
-+.-
T Consensus 99 ~V~N 102 (483)
T 3bh4_A 99 VVLN 102 (483)
T ss_dssp ECCS
T ss_pred EccC
Confidence 9875
No 278
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=29.22 E-value=39 Score=27.91 Aligned_cols=21 Identities=19% Similarity=0.192 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHcCCEEEEeh
Q 021893 81 GYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De 101 (306)
+.++++.+.|.++|+.+|+|-
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~ 99 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDF 99 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 567889999999999999984
No 279
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=29.14 E-value=38 Score=30.03 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=24.1
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.+.++++++.||++|+-||+|-+.-
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 58889999999999999999999875
No 280
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=28.94 E-value=38 Score=30.82 Aligned_cols=59 Identities=10% Similarity=0.022 Sum_probs=41.0
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCC-----C-------------------cccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 46 DITALEKIFKESG-DQIAGFLFEPIQGEA-----G-------------------VIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~-----G-------------------~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++..+.+.|.... --+.+|.++|++... | -...+.+.++++++.||++||-||+|
T Consensus 22 ~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD 101 (515)
T 1hvx_A 22 LWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYAD 101 (515)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4666666555321 236778888865411 1 12356889999999999999999999
Q ss_pred hhhh
Q 021893 101 EIQS 104 (306)
Q Consensus 101 e~~~ 104 (306)
-+.-
T Consensus 102 ~V~N 105 (515)
T 1hvx_A 102 VVFD 105 (515)
T ss_dssp ECCS
T ss_pred EecC
Confidence 9875
No 281
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=28.90 E-value=40 Score=23.20 Aligned_cols=49 Identities=24% Similarity=0.487 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHhcCCc----------EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 45 GDITALEKIFKESGDQ----------IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~----------~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
+|+++|+.+|..++.. ...++|+| .+.+...+-++.|++. |-+.+.+|=
T Consensus 30 ~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSp-yN~t~LpTVtpTYI~a----C~~~nTLLn 88 (106)
T 2l42_A 30 NDIDQLARLIRANGGEVLDSKPRESKENVFIVSP-YNHTNLPTVTPTYIKA----CCQSNSLLN 88 (106)
T ss_dssp STHHHHHHHHHTTTSCCCEECCCCCSSCCCCBCT-TCCCSSSBCCTTHHHH----HHHSTTSCG
T ss_pred hHHHHHHHHHHhcCcEEhhhCcccccCCeEEEeC-CCCCCCccccHHHHHH----HHhcCceec
Confidence 5899999999987521 23556666 5556666667777654 445555553
No 282
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=28.47 E-value=85 Score=22.93 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH-HHHHHHHcCCEEE-Eehhhh
Q 021893 45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA-VRDLCSKYNILMI-ADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~-i~~l~~~~gi~li-~De~~~ 104 (306)
.+++.|+++++++ ++..++|=-+.++.|..-+.....++ ...+.+++++.+. +||-++
T Consensus 40 ~~~~~l~~li~e~--~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlT 99 (138)
T 1nu0_A 40 PDWNIIERLLKEW--QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLS 99 (138)
T ss_dssp ECHHHHHHHHHHH--CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_pred hHHHHHHHHHHHc--CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3689999999986 34444444344444433221111122 2223344677655 898876
No 283
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=28.35 E-value=40 Score=30.34 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=41.0
Q ss_pred CHHHHHHHHHhcCC-cEEEEEEccccCCC-----C-------------------cccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 46 DITALEKIFKESGD-QIAGFLFEPIQGEA-----G-------------------VIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 46 d~~~le~~i~~~~~-~~~~v~v~~~~~~~-----G-------------------~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
++..+.+.|.-..+ -+.+|.++|++... | -...+.+.++++++.||++||-||+|
T Consensus 23 ~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 102 (485)
T 1wpc_A 23 HWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGD 102 (485)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 56666665553211 36778888865411 1 12446788999999999999999999
Q ss_pred hhhh
Q 021893 101 EIQS 104 (306)
Q Consensus 101 e~~~ 104 (306)
-+.-
T Consensus 103 ~V~N 106 (485)
T 1wpc_A 103 VVMN 106 (485)
T ss_dssp ECCS
T ss_pred Eecc
Confidence 9875
No 284
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=28.17 E-value=57 Score=26.45 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=31.2
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccC-------------ChhHHHHHHHHHHHcCCEEEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIP-------------PDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~-------------~~~~l~~i~~l~~~~gi~li~ 99 (306)
++.+++.+++...+-+=++|-|-...+|.... +.+.++.+.++++++++.+++
T Consensus 20 ~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~ 85 (262)
T 3ivz_A 20 YSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVA 85 (262)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEE
Confidence 44455555432112223455555555553322 236789999999999998875
No 285
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=28.03 E-value=79 Score=24.75 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=24.4
Q ss_pred CcEEEEEEccccCCC--C-------cccCChhHHHHHHHHHHHcCCEEE
Q 021893 59 DQIAGFLFEPIQGEA--G-------VIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 59 ~~~~~v~v~~~~~~~--G-------~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
+.++++++.|+.... | ......++-+.+.++|+++++.+|
T Consensus 146 p~~~iil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~i 194 (232)
T 3dci_A 146 AVPKLLIVAPPPCVAGPGGEPAGGRDIEQSMRLAPLYRKLAAELGHHFF 194 (232)
T ss_dssp CCCEEEEEECCCCCCCTTSSCGGGCCHHHHTTHHHHHHHHHHHHTCEEE
T ss_pred CCCeEEEEeCCCcCcccCcccccccHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 457777777654321 1 011123566788889999998864
No 286
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=27.83 E-value=51 Score=26.50 Aligned_cols=48 Identities=6% Similarity=0.056 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHCCceeccCCC-CEEEE-eCCCCCCHHHHHHHHHHHHHHH
Q 021893 229 VSAYDICLKMKERGILAKPTHD-TIVRL-TPPLSISSNELQEGSKALHDVL 277 (306)
Q Consensus 229 ~~~~~~~~~l~~~Gi~~~~~~~-~~lRi-~~~~~~t~~~i~~~~~~l~~~l 277 (306)
.+..++.+.+++.|+--.-.+- ..+ + .-...+..+|+.++++.+++.+
T Consensus 199 ~N~~~I~~i~l~aGv~~viPHIYssI-IDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 199 ENYSEILKIALDAGVSKIIPHIYSSI-IDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp TTHHHHHHHHHHHTCSCBCCBCCGGG-BCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHcCCCeeccccccee-ccCCCCCCCHHHHHHHHHHHHHhh
Confidence 4577888999998865331100 000 0 0013467899999999988765
No 287
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.76 E-value=43 Score=27.81 Aligned_cols=23 Identities=13% Similarity=0.301 Sum_probs=20.6
Q ss_pred ChhHHHHHHHHHHHcCCEEEEeh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De 101 (306)
+.+.++++.+.|+++|+.+|+|-
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEe
Confidence 46779999999999999999993
No 288
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=27.50 E-value=43 Score=28.80 Aligned_cols=22 Identities=23% Similarity=0.111 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHcCCEEEEeh
Q 021893 80 DGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De 101 (306)
.+.++++.+.|.++|+.+|+|-
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~ 141 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDW 141 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEc
Confidence 3557899999999999999984
No 289
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=27.27 E-value=45 Score=27.50 Aligned_cols=21 Identities=14% Similarity=0.091 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHcCCEEEEeh
Q 021893 81 GYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De 101 (306)
+.++++.+.|.++|+.+|+|-
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 567889999999999999984
No 290
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=26.83 E-value=1.2e+02 Score=21.18 Aligned_cols=44 Identities=7% Similarity=-0.076 Sum_probs=31.2
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.+...+.|+. .+.++|++-..- ++...+.+..+|..++++++.-
T Consensus 31 ~~~t~kai~~--gkakLVilA~D~--------~~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 31 YKTVLKTLRS--SLGKLIILANNC--------PPLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp HHHHHHHHHT--TCCSEEEECSCC--------CHHHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCcEEEe
Confidence 4556667764 456777775543 3455899999999999999843
No 291
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=26.75 E-value=48 Score=29.44 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCC--------------------cccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAG--------------------VIIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G--------------------~~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.|+..+.+.|.... --..+|.++|++.... ....+.+.++++++.|+++|+-||+|-+.
T Consensus 27 G~~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 27 GNFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CSHHHHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46666666555321 1367888888753211 11235688999999999999999999987
Q ss_pred h
Q 021893 104 S 104 (306)
Q Consensus 104 ~ 104 (306)
-
T Consensus 107 N 107 (449)
T 3dhu_A 107 N 107 (449)
T ss_dssp S
T ss_pred C
Confidence 4
No 292
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=26.75 E-value=44 Score=29.94 Aligned_cols=60 Identities=12% Similarity=0.177 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC-----------C----------cccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA-----------G----------VIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~-----------G----------~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
.|+..+.+.|.... --+.+|.++|++... | -...+.+.++++++.||++||-||+|-+
T Consensus 40 G~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp BCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 57777777665322 236777887765321 1 0234678899999999999999999998
Q ss_pred hh
Q 021893 103 QS 104 (306)
Q Consensus 103 ~~ 104 (306)
.-
T Consensus 120 ~N 121 (478)
T 2guy_A 120 AN 121 (478)
T ss_dssp CS
T ss_pred cc
Confidence 85
No 293
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=26.71 E-value=19 Score=31.34 Aligned_cols=25 Identities=8% Similarity=0.098 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 80 DGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.+.+++|.++|+++|+-+++|=.-.
T Consensus 49 ~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (372)
T 2p0o_A 49 RQRLTDLGAIAKAEKMKIMVDISGE 73 (372)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCHH
Confidence 5668999999999999999995544
No 294
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=26.65 E-value=43 Score=27.71 Aligned_cols=23 Identities=9% Similarity=0.235 Sum_probs=20.4
Q ss_pred ChhHHHHHHHHHHHcCCEEEEeh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De 101 (306)
..+.++++.+.|+++|+.+|+|-
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 46679999999999999999984
No 295
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=26.62 E-value=38 Score=30.43 Aligned_cols=59 Identities=7% Similarity=0.065 Sum_probs=42.4
Q ss_pred CHHHHHHH-HHhcCC-cEEEEEEccccCCCCc------------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 46 DITALEKI-FKESGD-QIAGFLFEPIQGEAGV------------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 46 d~~~le~~-i~~~~~-~~~~v~v~~~~~~~G~------------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
++..+.+. +....+ -+.+|.++|++..... ...+.+.++++++.||++|+-||+|-+.-
T Consensus 20 ~~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 20 KWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp CHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 47777665 353322 4888999887554321 12357789999999999999999999875
No 296
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=26.46 E-value=45 Score=29.83 Aligned_cols=61 Identities=10% Similarity=0.137 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHhcC-CcEEEEEEccccCCC---C-c---------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 44 FGDITALEKIFKESG-DQIAGFLFEPIQGEA---G-V---------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 44 ~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~---G-~---------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
-.|+..+.+.|.... --+.+|.++|++... | . ...+.+.++++++.||++|+-||+|-+.-
T Consensus 46 ~G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 120 (475)
T 2z1k_A 46 GGTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFN 120 (475)
T ss_dssp CCCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 457777777665321 136777777764321 1 0 12367889999999999999999998875
No 297
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=26.38 E-value=1.2e+02 Score=24.43 Aligned_cols=51 Identities=16% Similarity=0.175 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCc-----c-----------cCChhHHHHHHHHHHHcCCEEE
Q 021893 48 TALEKIFKESGDQIAGFLFEPIQGEAGV-----I-----------IPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~-----~-----------~~~~~~l~~i~~l~~~~gi~li 98 (306)
+.+-+.+++..+.++++++.|+...... . ..-.++-+.+.++|+++++.+|
T Consensus 148 ~~li~~lr~~~p~a~Iilitp~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~n~~i~~~a~~~~v~~v 214 (274)
T 3bzw_A 148 NIGITQLKKLFPDKQIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVI 214 (274)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCCCCCEECSTTEEECCTTBCCTTSCCHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHCCCCeEEEEeccccccccccccccCcccccchhhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 3333334444356788888875432110 0 1125677889999999998665
No 298
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=26.20 E-value=45 Score=30.42 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=42.5
Q ss_pred CCH-HHHHHHHHhcC-CcEEEEEEcccc----------CCC---C---------cccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 45 GDI-TALEKIFKESG-DQIAGFLFEPIQ----------GEA---G---------VIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 45 ~d~-~~le~~i~~~~-~~~~~v~v~~~~----------~~~---G---------~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.|+ ..+.+.|...+ --+.+|.++|++ ... | -...+.+.++++++.||++||-||+|
T Consensus 33 Gd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD 112 (527)
T 1gcy_A 33 NDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYD 112 (527)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 356 66666665321 236788888877 211 1 23346888999999999999999999
Q ss_pred hhhh
Q 021893 101 EIQS 104 (306)
Q Consensus 101 e~~~ 104 (306)
-+.-
T Consensus 113 ~V~N 116 (527)
T 1gcy_A 113 VVPN 116 (527)
T ss_dssp ECCS
T ss_pred Eeec
Confidence 9885
No 299
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=26.05 E-value=45 Score=30.27 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc--------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV--------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~--------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. =-+.+|.++|++...+. ...+.+.++++++.||+.||-||.|-|+-
T Consensus 29 Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 29 GDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp CCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 46666655544210 12667777887543221 12357789999999999999999999874
No 300
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=25.85 E-value=1e+02 Score=25.59 Aligned_cols=50 Identities=12% Similarity=0.262 Sum_probs=36.0
Q ss_pred cccccCCC--HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 39 HLKVDFGD--ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 39 ~~~~~~~d--~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
..++|+|+ ++.++.+.+ ...+++.++|..+ .+.. -+++.+.|.+||+.++
T Consensus 224 D~~fd~P~iG~dti~~~~~---ag~~~ivi~~g~s---i~~~----~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 224 ETRVALPTIGVATIHRAAR---AGLAGIVGEAGRL---LVVD----REAVIAAADDLGLFVL 275 (283)
T ss_dssp --CCCCCEECHHHHHHHHH---TTCCEEEEETTBC---EETT----HHHHHHHHHHHTCEEE
T ss_pred ccccCCccccHHHHHHHHH---cCCeEEEEcCCCc---EEeC----HHHHHHHHHHcCCEEE
Confidence 46777765 588888777 4688888877542 1235 6889999999999988
No 301
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=25.83 E-value=1.2e+02 Score=21.63 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEeh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De 101 (306)
.....++|+. .+..++++-..-. +++....|..+|++++++++.=.
T Consensus 29 ~~~v~Kai~~--gka~LViiA~D~~-------p~~~~~~i~~lc~~~~Ip~~~v~ 74 (126)
T 2xzm_U 29 LHEVLRTIEA--KQALFVCVAEDCD-------QGNYVKLVKALCAKNEIKYVSVP 74 (126)
T ss_dssp HHHHHHHHHH--TCCSEEEEESSCC-------STTHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHc--CCceEEEEeCCCC-------hHHHHHHHHHHHHHhCCCEEEEC
Confidence 4556667765 4566777655432 23447889999999999998433
No 302
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=25.80 E-value=1.7e+02 Score=26.11 Aligned_cols=54 Identities=9% Similarity=0.009 Sum_probs=36.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccc-----------cCCCCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 46 DITALEKIFKESGDQIAGFLFEPI-----------QGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 46 d~~~le~~i~~~~~~~~~v~v~~~-----------~~~~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
|+++..+++++.+-+-.++...+. ..+....-+.++.++++.+.||++|+-+.+
T Consensus 106 Dp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~Gl 170 (455)
T 2zxd_A 106 DPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGV 170 (455)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeEEE
Confidence 899999999986555444444432 011112234678999999999999997764
No 303
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.78 E-value=48 Score=29.79 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHhc--------C-CcEEEEEEccccCCCCc-------------ccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 45 GDITALEKIFKES--------G-DQIAGFLFEPIQGEAGV-------------IIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 45 ~d~~~le~~i~~~--------~-~~~~~v~v~~~~~~~G~-------------~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
.|+..+.+.|... . --+.+|.++|++...+. ...+.+.++++++.||++||-||+|-+
T Consensus 24 Gdl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 24 GDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCHHHHHHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4677776666543 2 23677888886543210 123678899999999999999999998
Q ss_pred hh
Q 021893 103 QS 104 (306)
Q Consensus 103 ~~ 104 (306)
.-
T Consensus 104 ~N 105 (488)
T 1wza_A 104 IN 105 (488)
T ss_dssp CS
T ss_pred cc
Confidence 74
No 304
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.72 E-value=45 Score=27.77 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=31.9
Q ss_pred CHHHHHHHHHhcCC-cEEEEEEccccCCCCcccCCh---hHHHHHHHHHHHcCCEEEEeh
Q 021893 46 DITALEKIFKESGD-QIAGFLFEPIQGEAGVIIPPD---GYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 46 d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~~~---~~l~~i~~l~~~~gi~li~De 101 (306)
+.++++.+.++.+- .+|+-+- +. ..|....+. +.++++.+.|+++|+.+|+|-
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~-~~--~~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~ 100 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMY-IQ--EDGYETNPRGFTDRMHQLIDMATARGLYVIVDW 100 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEE-SS--TTSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEee-ec--CCCcccCHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 45666655554442 3555443 21 122222222 568889999999999999984
No 305
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=31.57 E-value=15 Score=24.77 Aligned_cols=22 Identities=9% Similarity=0.294 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCEEEEehhhh
Q 021893 83 LKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 83 l~~i~~l~~~~gi~li~De~~~ 104 (306)
=++|+++++++|++++.|....
T Consensus 29 A~~I~e~A~e~~VPi~e~~~LA 50 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPELA 50 (87)
Confidence 5789999999999999998765
No 306
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=25.51 E-value=94 Score=23.67 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=24.3
Q ss_pred hcCCcEEEEEEccccCCCCcccC----------ChhHHHHHHHHHHHc-CCEEE
Q 021893 56 ESGDQIAGFLFEPIQGEAGVIIP----------PDGYLKAVRDLCSKY-NILMI 98 (306)
Q Consensus 56 ~~~~~~~~v~v~~~~~~~G~~~~----------~~~~l~~i~~l~~~~-gi~li 98 (306)
+..+..+++++.++......... -.++-+.+.++|+++ ++.++
T Consensus 120 ~~~p~~~iil~~~~p~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~~i 173 (214)
T 2hsj_A 120 RDYPLTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFV 173 (214)
T ss_dssp HHCTTCEEEEECCCCCCCSGGGHHHHTTCCHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred HhCCCCeEEEEecCCCCcccccccccccccHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 34455777777764322211000 014567788889888 87665
No 307
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=25.23 E-value=1.3e+02 Score=22.28 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=31.0
Q ss_pred HHHHHHHhcCCcEEEEEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEE-Eehhhh
Q 021893 49 ALEKIFKESGDQIAGFLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMI-ADEIQS 104 (306)
Q Consensus 49 ~le~~i~~~~~~~~~v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li-~De~~~ 104 (306)
...++|+..+ +.+.+.+-..+.. .+.+. .+.+.+=|..+|.+|+|.|| +|+...
T Consensus 32 EaaKaLdk~p-~~a~lCvLA~dcd~e~D~a-~~~y~kLveAlC~E~~I~lIkVdd~kk 87 (146)
T 3cg6_A 32 ESAKVLNVDP-DNVTFCVLAADEEDEGDIA-LQIHFTLIQAFCCENDIDIVRVGDVQR 87 (146)
T ss_dssp HHHHHHHHCG-GGEEEEEEECCTGGGGCHH-HHHHHHHHHHHHHHTTCEEEEECCHHH
T ss_pred HHHHHHhcCC-CeEEEEEecCCCccccchh-HHHHHHHHHHHHhhcCCCeEEeCchhH
Confidence 3444555432 3444444343322 12221 24557778899999999998 776654
No 308
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.20 E-value=46 Score=29.93 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC-----------C----------cccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA-----------G----------VIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~-----------G----------~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
.|+..+.+.|.... --+.+|.++|++... | -...+.+.++++++.||++||-||+|-+
T Consensus 40 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 40 GSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp CCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 57777777665322 236778888865321 1 0134678899999999999999999998
Q ss_pred hh
Q 021893 103 QS 104 (306)
Q Consensus 103 ~~ 104 (306)
.-
T Consensus 120 ~N 121 (484)
T 2aaa_A 120 PD 121 (484)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 309
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=25.18 E-value=50 Score=28.41 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=31.9
Q ss_pred CHHHHHHHHHhcCC-cEEEEEEccccCCCCcccCC--hhHHHHHHHHHHHcCCEEEEehhh
Q 021893 46 DITALEKIFKESGD-QIAGFLFEPIQGEAGVIIPP--DGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 46 d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~~--~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
+-++++.+.++.+- -+|+-+--+ . .+....+ .+.++++.+.|+++|+.+|+|--.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~--~-~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIG--E-NGYATNPEVKDLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESS--S-SSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeC--C-CCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34566654445443 356555421 1 1111111 246788899999999999998554
No 310
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.11 E-value=39 Score=29.78 Aligned_cols=26 Identities=19% Similarity=0.344 Sum_probs=23.8
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
+.+.++++++.||++||-||+|-+.-
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~N 98 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVIN 98 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 57889999999999999999999875
No 311
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=24.98 E-value=48 Score=28.51 Aligned_cols=24 Identities=8% Similarity=0.181 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
..+.++++.+.|.++|+.+|+|--
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH 108 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVH 108 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 466799999999999999999843
No 312
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=24.51 E-value=41 Score=24.17 Aligned_cols=24 Identities=8% Similarity=0.189 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..=.+|+++++++|++++.|....
T Consensus 71 ~~A~~I~~~A~e~~VPi~e~~~LA 94 (123)
T 2jli_A 71 AQVQTVRKIAEEEGVPILQRIPLA 94 (123)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 446889999999999999998765
No 313
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=24.45 E-value=49 Score=27.86 Aligned_cols=23 Identities=17% Similarity=0.069 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHHcCCEEEEehh
Q 021893 80 DGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De~ 102 (306)
-+.++++.+.|+++|+.+|.|-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 56689999999999999999853
No 314
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=24.43 E-value=93 Score=23.52 Aligned_cols=39 Identities=23% Similarity=0.363 Sum_probs=23.5
Q ss_pred cEEEEEEccccCCCCc----ccCChhHHHHHHHHHHHcCCEEE
Q 021893 60 QIAGFLFEPIQGEAGV----IIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 60 ~~~~v~v~~~~~~~G~----~~~~~~~l~~i~~l~~~~gi~li 98 (306)
..+++++.|...+... ...-.++-+.+.++|+++++.++
T Consensus 130 ~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 130 VREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp SSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 5677888754333211 11123456778888999997665
No 315
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=24.30 E-value=57 Score=26.56 Aligned_cols=47 Identities=9% Similarity=-0.041 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHCCceeccCCCCEEEEe----CCCCCCHHHHHHHHHHHHHHHh
Q 021893 229 VSAYDICLKMKERGILAKPTHDTIVRLT----PPLSISSNELQEGSKALHDVLE 278 (306)
Q Consensus 229 ~~~~~~~~~l~~~Gi~~~~~~~~~lRi~----~~~~~t~~~i~~~~~~l~~~l~ 278 (306)
.+..++.+.+++.|+--.-. .+--+ -...+..+|+.++++.+++.+.
T Consensus 222 ~Nf~~I~~i~l~aGv~~viP---HIYsSIIDk~TG~TrpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 222 ENFETIVRIALEANVEQVIP---HVYSSIIDKETGNTKVEAVRELLAVVKKLVD 272 (275)
T ss_dssp TTHHHHHHHHHHTTCSCBCC---EECGGGBCTTTCCBCHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCeecc---cccceeccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 45778999999998753321 00000 0134678999999999998886
No 316
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=24.09 E-value=54 Score=28.84 Aligned_cols=23 Identities=26% Similarity=0.211 Sum_probs=20.8
Q ss_pred ChhHHHHHHHHHHHcCCEEEEeh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De 101 (306)
..++|+++++.|+++|+.+|+|-
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 36789999999999999999994
No 317
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=23.95 E-value=1.1e+02 Score=27.55 Aligned_cols=45 Identities=4% Similarity=0.073 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
++.+++..+. .+++|++.... +.+..+++.++++++|+.++==++
T Consensus 50 ~~~v~e~~~~---Gv~~viis~Gf--------~~~~~~~l~~~A~~~g~rliGPNc 94 (480)
T 3dmy_A 50 AELANQALDR---NLNVMMFSDNV--------TLEDEIQLKTRAREKGLLVMGPDC 94 (480)
T ss_dssp HHHHHHHHHT---TCEEEECCCCC--------CHHHHHHHHHHHHHTTCCEECSSC
T ss_pred HHHHHHHHhc---CCCEEEECCCC--------CHHHHHHHHHHHHHcCCEEEecCc
Confidence 4566666653 45655543222 256678999999999999984444
No 318
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=23.87 E-value=85 Score=22.12 Aligned_cols=48 Identities=10% Similarity=0.042 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.+.+.+.|+. .+..++++-..-++.+ ....|..+|++++++++.-...
T Consensus 32 ~~~v~kal~~--gka~lViiA~D~~~~~-------~~~~l~~lc~~~~Vp~~~~~sk 79 (119)
T 1rlg_A 32 TNETTKAVER--GLAKLVYIAEDVDPPE-------IVAHLPLLCEEKNVPYIYVKSK 79 (119)
T ss_dssp HHHHHHHHTT--TCCSEEEEESCCSCST-------TTTHHHHHHHHHTCCEEEESCH
T ss_pred HHHHHHHHHc--CCCcEEEEeCCCChHH-------HHHHHHHHHHHcCCCEEEeCCH
Confidence 3455556654 3566677665543322 2577888999999998754433
No 319
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=23.53 E-value=86 Score=23.44 Aligned_cols=38 Identities=8% Similarity=0.163 Sum_probs=21.4
Q ss_pred cEEEEEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEE
Q 021893 60 QIAGFLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 60 ~~~~v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li 98 (306)
..+++++.+..++ .+. ....++-+.+.++|+++++.++
T Consensus 99 ~~~vil~~~~~p~~~~~-~~~~~~n~~~~~~a~~~~v~~i 137 (190)
T 1ivn_A 99 NAEPLLMQIRLPANYGR-RYNEAFSAIYPKLAKEFDVPLL 137 (190)
T ss_dssp TCEEEEECCCCCGGGCH-HHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEeccCCcchhH-HHHHHHHHHHHHHHHHcCCeEE
Confidence 3566666542221 121 1124456678888888988766
No 320
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=23.34 E-value=44 Score=24.53 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..=.+|+++++++|++++.|....
T Consensus 81 ~~A~~I~e~A~e~gVPi~e~~~LA 104 (137)
T 3bzs_A 81 AKALQIIKLAELYDIPVIEDIPLA 104 (137)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 346789999999999999998765
No 321
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=23.21 E-value=1.4e+02 Score=23.61 Aligned_cols=11 Identities=18% Similarity=0.582 Sum_probs=5.0
Q ss_pred EEEEehhhhcc
Q 021893 96 LMIADEIQSGL 106 (306)
Q Consensus 96 ~li~De~~~g~ 106 (306)
++.++-++.|+
T Consensus 141 ~vl~~sv~pg~ 151 (228)
T 1h1y_A 141 LVLVMTVEPGF 151 (228)
T ss_dssp EEEEESSCTTC
T ss_pred EEEEEeecCCC
Confidence 34445555433
No 322
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=23.20 E-value=1.1e+02 Score=20.03 Aligned_cols=28 Identities=7% Similarity=0.151 Sum_probs=23.8
Q ss_pred CChhHHHHHHHHHHHcCCEEEEehhhhc
Q 021893 78 PPDGYLKAVRDLCSKYNILMIADEIQSG 105 (306)
Q Consensus 78 ~~~~~l~~i~~l~~~~gi~li~De~~~g 105 (306)
++.+..+.+++.|++.|++|..|+...-
T Consensus 30 ~s~~efe~~~~yA~e~gvLlW~~~~kr~ 57 (80)
T 3dgp_A 30 ETSQEYNLLSKYAQDIGVLLWKDDKKKK 57 (80)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEETTTTE
T ss_pred CCHHHHHHHHHHHHHcCeEEEecCCccE
Confidence 3566789999999999999999988753
No 323
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=22.67 E-value=75 Score=22.61 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=14.3
Q ss_pred HHHHHHHHHcCCEEEE
Q 021893 84 KAVRDLCSKYNILMIA 99 (306)
Q Consensus 84 ~~i~~l~~~~gi~li~ 99 (306)
+++.++|+++|+.++-
T Consensus 95 ~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 95 EELEEILSENGIEPVI 110 (122)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCeEEC
Confidence 6899999999999883
No 324
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=22.66 E-value=1.3e+02 Score=22.13 Aligned_cols=19 Identities=5% Similarity=0.193 Sum_probs=13.9
Q ss_pred hhHHHHHHHHHHHcCCEEE
Q 021893 80 DGYLKAVRDLCSKYNILMI 98 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li 98 (306)
.++-+.+.++|+++++.++
T Consensus 123 ~~~~~~~~~~a~~~~~~~v 141 (185)
T 3hp4_A 123 KMFTSSFTQISEDTNAHLM 141 (185)
T ss_dssp HHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEE
Confidence 4556777788888887765
No 325
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=22.46 E-value=65 Score=28.45 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. =-+.+|.++|++.+... ...+.+.++++++.||++|+-||.|-+.-
T Consensus 33 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 33 GNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp CSHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46666655554321 13667777776433210 12356789999999999999999998875
No 326
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=22.41 E-value=2.1e+02 Score=23.14 Aligned_cols=50 Identities=8% Similarity=0.043 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEE
Q 021893 47 ITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILM 97 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~l 97 (306)
++.|++.+++.+.+.. |++.+ +....+..-......+++.++.+++++-+
T Consensus 166 ~~wL~~~L~~~~~~~~-iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~ 216 (313)
T 1ute_A 166 LAWIKKQLAAAKEDYV-LVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTA 216 (313)
T ss_dssp HHHHHHHHHHCCCSEE-EEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSE
T ss_pred HHHHHHHHHhCCCCeE-EEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcE
Confidence 5677888887644333 44443 22222222223455678888888888644
No 327
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=22.31 E-value=61 Score=27.36 Aligned_cols=21 Identities=19% Similarity=0.205 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHcCCEEEEeh
Q 021893 81 GYLKAVRDLCSKYNILMIADE 101 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De 101 (306)
+.++++.++|+++|+.+|.|-
T Consensus 91 ~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 91 SDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEc
Confidence 468999999999999999864
No 328
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=22.22 E-value=63 Score=26.87 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHcCCEEEEehhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~ 103 (306)
+.++++.+.|+++|+.+|+|--+
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h~ 94 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPHN 94 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 45888999999999999999433
No 329
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=22.17 E-value=61 Score=28.49 Aligned_cols=25 Identities=12% Similarity=0.162 Sum_probs=21.2
Q ss_pred ChhHHHHHHHHHHHcCCEEEEehhh
Q 021893 79 PDGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 79 ~~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
..+.|+++++.|+++|+.+|+|--.
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4567999999999999999999543
No 330
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=22.08 E-value=68 Score=26.58 Aligned_cols=14 Identities=7% Similarity=0.057 Sum_probs=6.9
Q ss_pred HHHHHHHHHHcCCE
Q 021893 83 LKAVRDLCSKYNIL 96 (306)
Q Consensus 83 l~~i~~l~~~~gi~ 96 (306)
.+.|.+++++.|+.
T Consensus 227 ~~~l~~~a~~~g~~ 240 (282)
T 3mfq_A 227 MKKLQEAVKAKGGQ 240 (282)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHHHhcCCc
Confidence 44455555555543
No 331
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=21.96 E-value=61 Score=30.05 Aligned_cols=61 Identities=20% Similarity=0.259 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC---Cc----------ccCChhHHHHHHHHHHHcCCEEEEehhhhc
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA---GV----------IIPPDGYLKAVRDLCSKYNILMIADEIQSG 105 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~---G~----------~~~~~~~l~~i~~l~~~~gi~li~De~~~g 105 (306)
.|+..+.+.|.-.. =-+.+|.++|++... |. ...+.+.++++++.||++||-||.|-++..
T Consensus 173 G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 247 (588)
T 1j0h_A 173 GDLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNH 247 (588)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCc
Confidence 36666665555321 136677777763221 10 123578899999999999999999998753
No 332
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=21.93 E-value=64 Score=25.80 Aligned_cols=12 Identities=33% Similarity=0.274 Sum_probs=5.6
Q ss_pred CHHHHHHHHHhc
Q 021893 46 DITALEKIFKES 57 (306)
Q Consensus 46 d~~~le~~i~~~ 57 (306)
++..+-+.+++.
T Consensus 100 ~~~~~i~~i~~~ 111 (228)
T 3ovp_A 100 NPGALIKDIREN 111 (228)
T ss_dssp CHHHHHHHHHHT
T ss_pred hHHHHHHHHHHc
Confidence 344444455543
No 333
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=21.91 E-value=73 Score=22.58 Aligned_cols=47 Identities=9% Similarity=0.005 Sum_probs=29.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
.+.+.+.|+. .+..++++-..-++. +....|..+|++++++++.-..
T Consensus 34 ~~~v~kai~~--gka~lViiA~D~~p~-------~~~~~l~~lc~~~~VP~~~v~s 80 (120)
T 1xbi_A 34 ANEVTKAVER--GIAKLVIIAEDVKPE-------EVVAHLPYLCEEKGIPYAYVAS 80 (120)
T ss_dssp HHHHHHHHHH--TCCSEEEEESCCSSG-------GGTTTHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHc--CCceEEEEcCCCChH-------HHHHHHHHHHHhcCCCEEEeCC
Confidence 4555666664 356666665544322 2356778889999998775433
No 334
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=21.84 E-value=57 Score=30.22 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC---C----------cccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA---G----------VIIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~---G----------~~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. =-+.+|.++|++... | -...+.+.++++++.||++||-||.|-++.
T Consensus 170 G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~N 243 (585)
T 1wzl_A 170 GDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFN 243 (585)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 36666655554211 136677777764321 1 123367889999999999999999998875
No 335
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=21.81 E-value=49 Score=24.51 Aligned_cols=24 Identities=8% Similarity=0.189 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHcCCEEEEehhhh
Q 021893 81 GYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 81 ~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..=.+|+++++++|++++.|....
T Consensus 80 ~~A~~I~e~A~e~gVPi~e~~~LA 103 (144)
T 2jlj_A 80 AQVQTVRKIAEEEGVPILQRIPLA 103 (144)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHH
Confidence 346789999999999999998765
No 336
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=21.74 E-value=49 Score=29.75 Aligned_cols=61 Identities=20% Similarity=0.220 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHhcC-CcEEEEEEccccCCC---C-c---------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 44 FGDITALEKIFKESG-DQIAGFLFEPIQGEA---G-V---------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 44 ~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~---G-~---------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
-.|+..+.+.|.... --+.+|.++|++... | . ...+.+.++++++.||++|+-||+|-+.-
T Consensus 52 ~Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 126 (488)
T 2wc7_A 52 GGDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFN 126 (488)
T ss_dssp CCCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CcCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457777776665321 136777777764321 1 1 12346789999999999999999998875
No 337
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=21.28 E-value=68 Score=29.42 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC----Cc----------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA----GV----------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~----G~----------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.... --+.+|.++|++... |. ...+.+.++++++.||++|+-||+|-+.-
T Consensus 28 Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 46766666555321 136678887764432 11 12357889999999999999999998875
No 338
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=21.19 E-value=64 Score=30.03 Aligned_cols=58 Identities=16% Similarity=0.170 Sum_probs=40.0
Q ss_pred HHHHHHHHHhcCC-cEEEEEEccccCCC------C-------------------cccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGD-QIAGFLFEPIQGEA------G-------------------VIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~-~~~~v~v~~~~~~~------G-------------------~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
+..+.+.|....+ -+.+|.++|++... | -...+.+.++++++.||++|+-||+|
T Consensus 149 ~~gi~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD 228 (599)
T 3bc9_A 149 WNLLAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFD 228 (599)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5556555553211 36788888865411 1 12346788999999999999999999
Q ss_pred hhhh
Q 021893 101 EIQS 104 (306)
Q Consensus 101 e~~~ 104 (306)
-+.-
T Consensus 229 ~V~N 232 (599)
T 3bc9_A 229 AVLN 232 (599)
T ss_dssp ECCS
T ss_pred ECcC
Confidence 9875
No 339
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=21.16 E-value=64 Score=29.99 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC-------Cc----------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA-------GV----------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~-------G~----------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. --+.+|.++|++.+. |. ...+.+.++++++.||++||-||+|-+.-
T Consensus 145 Gdl~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 145 GDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 57777777775321 236788888875321 10 13467789999999999999999999875
No 340
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=21.05 E-value=1.9e+02 Score=23.19 Aligned_cols=43 Identities=7% Similarity=0.165 Sum_probs=31.5
Q ss_pred HHHhcCCcEEEEEEccccCC----------CCcccCChhHHHHHHHHHHHcCCEEEE
Q 021893 53 IFKESGDQIAGFLFEPIQGE----------AGVIIPPDGYLKAVRDLCSKYNILMIA 99 (306)
Q Consensus 53 ~i~~~~~~~~~v~v~~~~~~----------~G~~~~~~~~l~~i~~l~~~~gi~li~ 99 (306)
+.+--+-.+++++||-.+.. .|...- +.++.+++++||+.++.
T Consensus 160 LarLAGl~PagVicEi~~~~~~~~~~~~~~dG~mar----~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 160 LCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLR----GDECVAFARRWGLKVCT 212 (233)
T ss_dssp HHHHTTCCSBEEEEEBEECCEECTTSSCEESCEECC----HHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCceEEEEEeCCCcccccccccCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 33333456888999887551 355555 99999999999999984
No 341
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=21.03 E-value=1.4e+02 Score=24.66 Aligned_cols=52 Identities=10% Similarity=0.077 Sum_probs=32.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCC---CcccCChhHHHHHHHHHHHcCCEEEEe
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEA---GVIIPPDGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~---G~~~~~~~~l~~i~~l~~~~gi~li~D 100 (306)
.++|++.+++ ...++|-+.+....+ .......+.++.+.++|.++|+++++-
T Consensus 110 ~~el~~~~~~--~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 164 (327)
T 2dvt_A 110 TEELQRCVND--LGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLH 164 (327)
T ss_dssp HHHHHHHHHT--TCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhc--CCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEEC
Confidence 3455555553 356666665543211 013345667899999999999998864
No 342
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.91 E-value=68 Score=27.22 Aligned_cols=24 Identities=8% Similarity=0.141 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHHcCCEEEEehhh
Q 021893 80 DGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.+.++++.+.|+++|+.+|+|--.
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecCC
Confidence 466899999999999999999543
No 343
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=20.78 E-value=67 Score=29.64 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC----C-c---------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA----G-V---------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~----G-~---------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. --+.+|.++|++... | . ...+.+.++++++.||++||-||+|-+.-
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 116 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVIN 116 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 46766666554211 136678888764332 1 1 13367889999999999999999999875
No 344
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=20.71 E-value=69 Score=26.99 Aligned_cols=24 Identities=25% Similarity=0.527 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHHcCCEEEEehhh
Q 021893 80 DGYLKAVRDLCSKYNILMIADEIQ 103 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De~~ 103 (306)
.+.++++.+.|+++|+.+|+|--+
T Consensus 68 ~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 68 LSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 346788999999999999999544
No 345
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=20.68 E-value=70 Score=27.34 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCc-EEEEEEcc-ccC--CCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 47 ITALEKIFKESGDQ-IAGFLFEP-IQG--EAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 47 ~~~le~~i~~~~~~-~~~v~v~~-~~~--~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
..++.+.+++.+-+ +|+-+--. ..+ .+|.+ ....+.++++++.|.++|+.+|+|--+.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~ 107 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECST
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 46677777776534 45544221 111 12221 0114567888899999999999995543
No 346
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=20.62 E-value=76 Score=29.70 Aligned_cols=62 Identities=15% Similarity=0.125 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC-----Cc----------ccCChhHHHHHHHHHHHcCCEEEEehhhhcc
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA-----GV----------IIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~-----G~----------~~~~~~~l~~i~~l~~~~gi~li~De~~~g~ 106 (306)
.++..+.+.|.... --+.+|.+.|++... |. ...+.+.++++++.|+++||-||.|-++.-+
T Consensus 151 G~~~~~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~ 228 (618)
T 3m07_A 151 GTFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHF 228 (618)
T ss_dssp CSHHHHHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccC
Confidence 46666666554321 136677888873211 11 1335678999999999999999999998643
No 347
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=20.61 E-value=85 Score=22.33 Aligned_cols=47 Identities=9% Similarity=0.007 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh
Q 021893 47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~ 102 (306)
.+.+.+.|+. .+..++++-..-++. +....|..+|++++++++.-..
T Consensus 33 ~~~v~kal~~--gka~lViiA~D~~~~-------~~~~~l~~lc~~~~Vp~~~v~s 79 (124)
T 2fc3_A 33 TNETTKAVER--GLAKLVVIAEDVDPP-------EIVMHLPLLCDEKKIPYVYVPS 79 (124)
T ss_dssp HHHHHHHHHT--TCCSEEEEETTCSSG-------GGTTTHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHc--CCceEEEEcCCCChH-------HHHHHHHHHHHHcCCCEEEECC
Confidence 3445555553 356666665554332 2256677889999998764433
No 348
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=20.60 E-value=66 Score=30.16 Aligned_cols=60 Identities=15% Similarity=0.207 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc-------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV-------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~-------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. =-+.+|.++|++.+.+. ...+.+.++++++.||+.||-||.|-+.-
T Consensus 236 Gdl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 236 GDLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 46777666655221 12667777876433211 24477889999999999999999999874
No 349
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=20.55 E-value=68 Score=29.46 Aligned_cols=60 Identities=12% Similarity=0.099 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCCCc--------------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGV--------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~--------------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. --+.+|.++|++...+. ...+.+.++++++.||++||-||+|-+.-
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 103 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVIN 103 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 46766666554221 13677777776443210 13467889999999999999999999875
No 350
>2dn5_A General transcription factor II-I repeat domain- containing protein 1; structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.36 E-value=1.5e+02 Score=19.85 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=23.3
Q ss_pred cccccCC---CHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893 39 HLKVDFG---DITALEKIFKESGDQIAGFLFEPIQGE 72 (306)
Q Consensus 39 ~~~~~~~---d~~~le~~i~~~~~~~~~v~v~~~~~~ 72 (306)
-+.++++ +...||+.|+.. +.+..+++....+.
T Consensus 52 gi~FR~P~~y~I~~Le~IL~~~-~~I~f~ii~~l~~~ 87 (89)
T 2dn5_A 52 DIPFRNPNTYDIHRLEKILKAR-EHVRMVIINQSGPS 87 (89)
T ss_dssp TCCCCCSSSCCHHHHHHHHTTT-TTCEEEESSCCCCS
T ss_pred CccccCCccccHHHHHHHHhhc-cCceEEEEeccccC
Confidence 3444444 789999999865 57888888776543
No 351
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=20.31 E-value=2e+02 Score=23.63 Aligned_cols=63 Identities=17% Similarity=0.233 Sum_probs=40.0
Q ss_pred ccccCCCHHHHHHHHHhcCCcEEEEEEccc-cCCCCcccCChh-HHHHHHHHHHHcCCEEEEehhhhccc
Q 021893 40 LKVDFGDITALEKIFKESGDQIAGFLFEPI-QGEAGVIIPPDG-YLKAVRDLCSKYNILMIADEIQSGLA 107 (306)
Q Consensus 40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~-~~~~G~~~~~~~-~l~~i~~l~~~~gi~li~De~~~g~~ 107 (306)
+-.+.+|.+...+++++-++.+..+=+-.. ....| .+ .+++|.++++++|..++.|-=..+.+
T Consensus 34 VALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G-----~~~~v~~L~~l~~~~g~~IflDlK~~DIp 98 (267)
T 3gdm_A 34 ASLDVRTTKELLELVEALGPKICLLKTHVDILTDFS-----MEGTVKPLKALSAKYNFLLFEDRRFADIG 98 (267)
T ss_dssp EECCCSCHHHHHHHHHHHGGGCSEEEECGGGCSSCC-----TTTTHHHHHHHHHHHTCEEEEEEEECCCH
T ss_pred EEeCcCCHHHHHHHHHHhCCcCcEEEECHHHHHhcC-----HHHHHHHHHHHHhhcCCeEEEEeccccch
Confidence 445666888888887765444433333322 22222 23 48888889888999999997666543
No 352
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=20.27 E-value=69 Score=26.95 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=18.5
Q ss_pred hhHHHHHHHHHHHcCCEEEEe
Q 021893 80 DGYLKAVRDLCSKYNILMIAD 100 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~D 100 (306)
.+.++++.+.|+++|+++++|
T Consensus 141 ~~~i~~v~~~~~~~G~p~lv~ 161 (304)
T 1to3_A 141 LNMVKEFNELCHSNGLLSIIE 161 (304)
T ss_dssp HHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEE
Confidence 366888899999999999998
No 353
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=20.24 E-value=70 Score=29.39 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHhcC-CcEEEEEEccccCCC----Cc----------ccCChhHHHHHHHHHHHcCCEEEEehhhh
Q 021893 45 GDITALEKIFKESG-DQIAGFLFEPIQGEA----GV----------IIPPDGYLKAVRDLCSKYNILMIADEIQS 104 (306)
Q Consensus 45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~----G~----------~~~~~~~l~~i~~l~~~~gi~li~De~~~ 104 (306)
.|+..+.+.|.-.. --+.+|.++|++... |. ...+.+.++++++.||++||-||+|-+.-
T Consensus 28 Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 102 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVN 102 (558)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 46666655443211 136677777764332 11 13367889999999999999999999875
No 354
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=20.09 E-value=74 Score=26.59 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHHcCCEEEEehh
Q 021893 80 DGYLKAVRDLCSKYNILMIADEI 102 (306)
Q Consensus 80 ~~~l~~i~~l~~~~gi~li~De~ 102 (306)
-+.++++.+.|+++|+.+|+|--
T Consensus 81 ~~~~d~~v~~a~~~Gi~vildlh 103 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVIINCH 103 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 46688999999999999999854
Done!