BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021895
(306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
168) GN=purU PE=3 SV=2
Length = 300
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 44/237 (18%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFF 107
CPD+ GIV+ +S + G NI+ ++ + + + F+ R EF I+ + + F
Sbjct: 26 CPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFDCAGIREKKSSLQAAFA 85
Query: 108 KLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR 167
+++ F+ S+ ++ +VA+ SK+ HCL + ++ WQ G L EI VISNH+
Sbjct: 86 SVAEKFDMTWSLTLASELK---RVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEE 142
Query: 168 GPNSHVIRFLERHGIPYHYLCAKEN---EREEELLELVQ--NTDFLVLARYMQPVPLQKE 222
+ER IP+HY+ A ++ E E++ LEL++ + D +VLARYMQ
Sbjct: 143 AR-----ELVERLNIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQ------- 190
Query: 223 AYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
IL+ F+ ++ +INIHH LP+F G P K+
Sbjct: 191 -----------------------ILTPDFVSAHPNRIINIHHSFLPAFIGANPYKRA 224
>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=purU PE=3 SV=1
Length = 284
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 44/232 (18%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ GIVA++++ I GNI+ AD +F +R E+ D + R ++ + +
Sbjct: 12 CPDQPGIVAQIAQFIYQNQGNIIHADQHTDFSSGLFLNRVEWQLDNFRLSRPELLSAWSQ 71
Query: 109 LSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 168
L++ A + D P+ +A+ SKQ+HCL+D L+ W+ G+L EI +ISNH
Sbjct: 72 LAEQLQATWQI-HFSDQLPR--LALWVSKQDHCLLDILWRWRSGELRCEIPLIISNH--- 125
Query: 169 PNSHVIRFLERHGIPYHYL-CAKENEREEELLELV----QNTDFLVLARYMQPVPLQKEA 223
P+ I ++ GI +H L KEN+ +E EL D +VLA+Y+Q
Sbjct: 126 PDLKSIA--DQFGIDFHCLPITKENKLAQETAELALLKQYQIDLVVLAKYLQ-------- 175
Query: 224 YLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
IL+ F+ + ++INIHH LP+F G P
Sbjct: 176 ----------------------ILTTDFVVQF-PNIINIHHSFLPAFPGANP 204
>sp|P0A5T6|PURU_MYCTU Formyltetrahydrofolate deformylase OS=Mycobacterium tuberculosis
GN=purU PE=3 SV=1
Length = 310
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 48/241 (19%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAADVF--VPEKKNVFYSRSEFIFDPIKWPREQMD 103
+ C D GI+A +S +A G NI++ D PE F R+ F + +++
Sbjct: 34 LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92
Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
DF S + + R + +VA++AS ++HCL+D L+ + G+L + + VI+
Sbjct: 93 RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150
Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQPV 217
NH P+ +HV F G+P+ ++ A + R E +L L N D +VLARYMQ
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ-- 201
Query: 218 PLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277
ILS FL + G +INIHH LP+F G P +
Sbjct: 202 ----------------------------ILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQ 233
Query: 278 Q 278
+
Sbjct: 234 R 234
>sp|P0A5T7|PURU_MYCBO Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=purU PE=3 SV=1
Length = 310
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 48/241 (19%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAADVF--VPEKKNVFYSRSEFIFDPIKWPREQMD 103
+ C D GI+A +S +A G NI++ D PE F R+ F + +++
Sbjct: 34 LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92
Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
DF S + + R + +VA++AS ++HCL+D L+ + G+L + + VI+
Sbjct: 93 RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150
Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQPV 217
NH P+ +HV F G+P+ ++ A + R E +L L N D +VLARYMQ
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQ-- 201
Query: 218 PLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277
ILS FL + G +INIHH LP+F G P +
Sbjct: 202 ----------------------------ILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQ 233
Query: 278 Q 278
+
Sbjct: 234 R 234
>sp|Q46339|PURU_CORS1 Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain
P-1) GN=purU PE=3 SV=1
Length = 286
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 43/238 (18%)
Query: 47 FHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDF 106
CP+ +GIV ++ + I+ + + R +F D + + +F
Sbjct: 11 LQCPEGIGIVHAVTGFLVRHQRTIVELKQYDDMSAGRLFLRVDFAGDSAPDLLDALRSEF 70
Query: 107 FKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHD 166
+++ F+ M +R + K KV ++ SK EHCL D L+ G LP+E+ V SNH
Sbjct: 71 SEVAAKFD-MDWQLR--ERGQKTKVLIMVSKFEHCLQDLLFRMHSGDLPIEVVGVASNH- 126
Query: 167 RGPNSHVIRFLERHGIPYHYLCAKENER---EEELLELVQNT--DFLVLARYMQPVPLQK 221
P+ + +E +GI +H++ ++ + E LLEL+ T + +VLARYMQ
Sbjct: 127 --PDHRSL--VEWYGIGFHHIPISKDTKPRAEAALLELIDQTGAELVVLARYMQ------ 176
Query: 222 EAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
L+ + L+GK INIHH LPSFKG KP Q
Sbjct: 177 ----------------VLSDHLASELTGK--------TINIHHSFLPSFKGAKPYHQA 210
>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
GN=purU PE=1 SV=1
Length = 280
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 58/240 (24%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQPVP 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMR--- 171
Query: 219 LQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ + +INIHH LP+F G +P Q
Sbjct: 172 ---------------------------VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQ 204
>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
PE=3 SV=1
Length = 280
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 58/240 (24%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQPVP 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMR--- 171
Query: 219 LQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ + +INIHH LP+F G +P Q
Sbjct: 172 ---------------------------VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQ 204
>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
Length = 280
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 58/240 (24%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQPVP 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMR--- 171
Query: 219 LQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ + +INIHH LP+F G +P Q
Sbjct: 172 ---------------------------VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQ 204
>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
SV=2
Length = 278
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 54/238 (22%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEF--IFDPIKWPREQMDEDF 106
CPD+ G++AK++ NIL + FV + F+ R+E IF+ +++
Sbjct: 11 CPDDKGLIAKITNICYKHQLNILHNNEFVDFETKHFFMRTELEGIFNEATL----LEDLK 66
Query: 107 FKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHD 166
+ L + N R+ K ++ +L +K+ HCL D L G L VEI VI NHD
Sbjct: 67 YSLPEETNC-----RLIGTQRK-RIVILVTKEAHCLGDILMKNYYGALDVEIAAVIGNHD 120
Query: 167 RGPNSHVIRFLERHGIPYHYLCAKEN----EREEELLELVQ--NTDFLVLARYMQPVPLQ 220
++ +ER IP+H L + EN E ++ L E + D++VLA+YM+
Sbjct: 121 -----NLRELVERFNIPFH-LVSHENLTRVEHDKLLAEKIDEYTPDYIVLAKYMR----- 169
Query: 221 KEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQ 278
+L+ +F+ Y VINIHH LP+F G KP +Q
Sbjct: 170 -------------------------VLNPEFVARYPNRVINIHHSFLPAFIGAKPYQQ 202
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus
gallus GN=GART PE=2 SV=1
Length = 1003
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 59/152 (38%), Gaps = 27/152 (17%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
K KVAVL S L + ++ EI V+SN +R ER GIP +
Sbjct: 803 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK---AGVEGLRKAERAGIPTRVI 859
Query: 188 CAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 247
K+ E V ++LE S + + F IL
Sbjct: 860 DHKQYGSRTEFDSAVD------------------------RVLEEFSVELICLAGFMRIL 895
Query: 248 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
SG F++ + ++NIH LLPSFKG K V
Sbjct: 896 SGPFVKKWEGKILNIHPSLLPSFKGANAHKLV 927
>sp|Q59A32|PUR2_BOVIN Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus
GN=GART PE=2 SV=1
Length = 1010
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 228 KLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
++LE S+ + F ILSG F+R + ++NIH LLPSFKG +QV
Sbjct: 880 EVLEEFSTDIVCLAGFMRILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQV 931
>sp|P43846|PUR3_HAEIN Phosphoribosylglycinamide formyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purN PE=3 SV=1
Length = 212
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 39/149 (26%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189
K+AVL S Q L + G +P +I CVISN +++ + ++ IP
Sbjct: 3 KIAVLISGQGTNLQTIIDACHSGDIPAKIACVISNK---ADAYGLVRAKQAQIPQAVFLR 59
Query: 190 KENEREEELLELVQN------TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF 243
K E+ + + + D +VLA YM+
Sbjct: 60 KNFSNNLEMDDAIGDYLQSLAVDLIVLAGYMK---------------------------- 91
Query: 244 NMILSGKFLRSYGKDVINIHHGLLPSFKG 272
IL+ KF + + ++NIH LLP + G
Sbjct: 92 --ILTPKFTQRFAGKILNIHPSLLPKYAG 118
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 OS=Mus
musculus GN=Gart PE=2 SV=3
Length = 1010
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 61/152 (40%), Gaps = 27/152 (17%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
K +VAVL S L + ++ K I VISN + + + R ER GIP +
Sbjct: 807 KARVAVLISGTGSNLQALIDSTRDPKSSSHIVLVISN--KAAVAGLDR-AERAGIPTRVI 863
Query: 188 CAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 247
K + E V + +LE S + F IL
Sbjct: 864 NHKLYKNRVEFDNAVDH------------------------VLEEFSVDIVCLAGFMRIL 899
Query: 248 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
SG F+R + ++NIH LLPSFKG +QV
Sbjct: 900 SGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQV 931
>sp|Q049P0|FMT_LACDB Methionyl-tRNA formyltransferase OS=Lactobacillus delbrueckii
subsp. bulgaricus (strain ATCC BAA-365) GN=fmt PE=3 SV=1
Length = 315
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 215 QPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274
QPV L K L +LL+ L + +T+ F L KFL+S +N+H LLP ++GG
Sbjct: 62 QPVRLSKSDELD-ELLQ-LDADFIITAAFGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGA 119
Query: 275 P 275
P
Sbjct: 120 P 120
>sp|P64138|FMT_STRA5 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=fmt PE=3
SV=1
Length = 311
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L +L + G +T+ F L K L S G IN+H LLP ++GG P
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAP 120
>sp|P64137|FMT_STRA3 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=fmt PE=3 SV=1
Length = 311
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L +L + G +T+ F L K L S G IN+H LLP ++GG P
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAP 120
>sp|Q3K365|FMT_STRA1 Methionyl-tRNA formyltransferase OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=fmt PE=3 SV=1
Length = 311
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L +L + G +T+ F L K L S G IN+H LLP ++GG P
Sbjct: 76 LMTLGADGIVTAAFGQFLPTKLLESVGF-AINVHASLLPKYRGGAP 120
>sp|Q7NV65|HEMH_CHRVO Ferrochelatase OS=Chromobacterium violaceum (strain ATCC 12472 /
DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
9757) GN=hemH PE=3 SV=1
Length = 364
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 102 MDEDFFKLSKMFN--AMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEIT 159
+DE F LS++ N +R+V D DP Y A+ A ++H WQ G+ P ++
Sbjct: 159 LDEAFRVLSRLRNMPEVRTVRHFHD-DPGYIAALAAQIRKH--------WQYGQRPDKL- 208
Query: 160 CVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201
V+S H V RF G PYH C K E L+L
Sbjct: 209 -VMSFHG------VPRFTRDKGDPYHCECQKTGRLLAEALQL 243
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo
sapiens GN=GART PE=1 SV=1
Length = 1010
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 229 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
+LE S + F ILSG F++ + ++NIH LLPSFKG +Q
Sbjct: 881 VLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQA 931
>sp|Q5FJH5|FMT_LACAC Methionyl-tRNA formyltransferase OS=Lactobacillus acidophilus
(strain ATCC 700396 / NCK56 / N2 / NCFM) GN=fmt PE=3
SV=1
Length = 314
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ + L KFL+S +N+H LLP ++GG P
Sbjct: 84 VTAAYGQFLPTKFLKSVNIAAVNVHGSLLPKYRGGAP 120
>sp|B1HQE4|FMT_LYSSC Methionyl-tRNA formyltransferase OS=Lysinibacillus sphaericus
(strain C3-41) GN=fmt PE=3 SV=1
Length = 313
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 212 RYMQPVPLQKEAY-LGYKLLESLSSKGS--------------LTSYFNMILSGKFLRSYG 256
R + P P++ A LG +++ +GS +T+ F IL + L +
Sbjct: 42 RILTPPPVKAAALELGLPIIQPEKLRGSEELQQILSLQPDIVITAAFGQILPKELLDAPS 101
Query: 257 KDVINIHHGLLPSFKGGKPAKQV 279
IN+H LLP ++GG P Q
Sbjct: 102 LGCINVHASLLPKYRGGAPIHQA 124
>sp|Q24MT3|SECA_DESHY Protein translocase subunit SecA OS=Desulfitobacterium hafniense
(strain Y51) GN=secA PE=3 SV=2
Length = 834
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 142 LVDFLYGWQEGKLPVEITCVISNHDRG-----------PNSHVIRFLERHGIPYHYLCAK 190
L D +Y +EGK + +I H +G + + LER GIP+ L AK
Sbjct: 402 LPDVVYRTEEGKFKAVVEEIIERHKKGQPVLVGTVSVEKSERLSSMLERRGIPHQVLNAK 461
Query: 191 ENEREEELL 199
+E+E E++
Sbjct: 462 FHEKEAEII 470
>sp|A6LJK9|FMT_THEM4 Methionyl-tRNA formyltransferase OS=Thermosipho melanesiensis
(strain BI429 / DSM 12029) GN=fmt PE=3 SV=1
Length = 303
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 215 QPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274
QP L KE G K++E+L + + +L FL + + N+H LLPS++G
Sbjct: 61 QPKKLNKE---GLKIIENLKPDIGIVVAYGKLLKPPFLNTL--EFYNVHASLLPSYRGAA 115
Query: 275 PAKQV 279
P ++V
Sbjct: 116 PIQRV 120
>sp|Q92AI5|FMT_LISIN Methionyl-tRNA formyltransferase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=fmt PE=3 SV=1
Length = 312
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 212 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 256
R + P P++K A Y KL L SL + +T+ + IL L S
Sbjct: 41 RILTPPPVKKAALELGIPVYQPEKLRTSSELEELISLEADLLVTAAYGQILPNTLLESPK 100
Query: 257 KDVINIHHGLLPSFKGGKP 275
IN+H LLP ++GG P
Sbjct: 101 HGAINVHASLLPEYRGGAP 119
>sp|Q5HPX5|FMT_STAEQ Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=fmt PE=3 SV=1
Length = 310
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 215 QPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274
QP L+ L +L SL S +T+ F +L L + IN+H LLP ++GG
Sbjct: 61 QPEKLKDSQEL--DVLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGA 118
Query: 275 PAKQ 278
P Q
Sbjct: 119 PIHQ 122
>sp|Q7NJK1|FMT_GLOVI Methionyl-tRNA formyltransferase OS=Gloeobacter violaceus (strain
PCC 7421) GN=fmt PE=3 SV=1
Length = 310
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277
LE+L + + + + IL + L G+ IN+H LLP ++G P +
Sbjct: 76 LEALQADFFVVAAYGQILPQRVLDMPGRGCINVHGSLLPKYRGAAPVQ 123
>sp|P17098|ZNF8_HUMAN Zinc finger protein 8 OS=Homo sapiens GN=ZNF8 PE=1 SV=2
Length = 575
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 183 PYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY 242
PY K+ E + + L L + + L ++ P+Q + Y +L E+ S
Sbjct: 132 PYPTTLGKDRECQSQSLALKEQNNLKQLEFGLKEAPVQDQGYKTLRLRENCVLSSSPNP- 190
Query: 243 FNMILSGKFLRSYGKDVINI-HHGLLPSFKGGKPAKQVGCFTFC 285
F I G++L +Y + + H+ L S + G P KQ G + C
Sbjct: 191 FPEISRGEYLYTYDSQITDSEHNSSLVSQQTGSPGKQPGENSDC 234
>sp|Q88WL3|FMT_LACPL Methionyl-tRNA formyltransferase OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=fmt PE=3 SV=1
Length = 317
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277
+T+ F L K L++ +N+H LLP ++GG P +
Sbjct: 84 VTAAFGQFLPTKLLKAAKIGAVNVHGSLLPKYRGGAPVQ 122
>sp|B9DV45|FMT_STRU0 Methionyl-tRNA formyltransferase OS=Streptococcus uberis (strain
ATCC BAA-854 / 0140J) GN=fmt PE=3 SV=1
Length = 311
Score = 34.7 bits (78), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 220 QKEAYLGYKLLES---LSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
Q E G + LES L + G +T+ F L K L S +N+H LLP ++GG P
Sbjct: 63 QPEKLSGSQELESIMSLDADGIVTAAFGQFLPTKLLDSV-TFAVNVHASLLPKYRGGAP 120
>sp|Q82ZD8|FMT_ENTFA Methionyl-tRNA formyltransferase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=fmt PE=3 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 212 RYMQPVPLQKEAYLGYKLL----ESLSSKGSL------------TSYFNMILSGKFLRSY 255
+ + P P+ KEA L + LL E +S + T+ F L K L++
Sbjct: 42 KVITPTPV-KEAALKHNLLVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAP 100
Query: 256 GKDVINIHHGLLPSFKGGKP 275
IN+H LLP ++GG P
Sbjct: 101 KLGAINVHASLLPKYRGGAP 120
>sp|Q03RS3|FMT_LACBA Methionyl-tRNA formyltransferase OS=Lactobacillus brevis (strain
ATCC 367 / JCM 1170) GN=fmt PE=3 SV=1
Length = 314
Score = 34.7 bits (78), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ F L K L++ +N+H LLP ++GG P
Sbjct: 84 VTAAFGQFLPTKLLKAAKVAAVNVHASLLPKYRGGAP 120
>sp|Q9K9Y6|FMT_BACHD Methionyl-tRNA formyltransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=fmt PE=3 SV=1
Length = 317
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 214 MQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273
+QP ++ EA L + L S +T+ F IL L IN+H LLP ++GG
Sbjct: 60 LQPEKIRDEAEL--ERLFSFEPDLIVTAAFGQILPNALLEYPKHGCINVHASLLPKYRGG 117
Query: 274 KPAKQV 279
P Q
Sbjct: 118 APIHQA 123
>sp|Q71YJ3|FMT_LISMF Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype
4b (strain F2365) GN=fmt PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 212 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 256
R + P P++K A Y KL L +L + +T+ + IL L S
Sbjct: 41 RVLTPPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPK 100
Query: 257 KDVINIHHGLLPSFKGGKP 275
IN+H LLP ++GG P
Sbjct: 101 HGAINVHASLLPEYRGGAP 119
>sp|C1KWC2|FMT_LISMC Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype
4b (strain CLIP80459) GN=fmt PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 212 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 256
R + P P++K A Y KL L +L + +T+ + IL L S
Sbjct: 41 RVLTPPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPK 100
Query: 257 KDVINIHHGLLPSFKGGKP 275
IN+H LLP ++GG P
Sbjct: 101 HGAINVHASLLPEYRGGAP 119
>sp|Q8Y676|FMT_LISMO Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=fmt PE=3 SV=1
Length = 312
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 212 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 256
R + P P++K A Y KL L +L + +T+ + IL L S
Sbjct: 41 RVLTPPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPK 100
Query: 257 KDVINIHHGLLPSFKGGKP 275
IN+H LLP ++GG P
Sbjct: 101 HGAINVHASLLPEYRGGAP 119
>sp|A4VTF3|FMT_STRSY Methionyl-tRNA formyltransferase OS=Streptococcus suis (strain
05ZYH33) GN=fmt PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L +L + G +T+ F L K L S +N+H LLP ++GG P
Sbjct: 76 LMNLGADGIVTAAFGQFLPTKLLNSV-DFAVNVHASLLPKYRGGAP 120
>sp|A4VZN1|FMT_STRS2 Methionyl-tRNA formyltransferase OS=Streptococcus suis (strain
98HAH33) GN=fmt PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L +L + G +T+ F L K L S +N+H LLP ++GG P
Sbjct: 76 LMNLGADGIVTAAFGQFLPTKLLNSV-DFAVNVHASLLPKYRGGAP 120
>sp|B8DDS9|FMT_LISMH Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype
4a (strain HCC23) GN=fmt PE=3 SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 212 RYMQPVPLQKEA-------YLGYKL--------LESLSSKGSLTSYFNMILSGKFLRSYG 256
R + P P++K A Y KL L +L + +T+ + IL L S
Sbjct: 41 RVLTPPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPK 100
Query: 257 KDVINIHHGLLPSFKGGKP 275
IN+H LLP ++GG P
Sbjct: 101 HGAINVHASLLPEYRGGAP 119
>sp|Q74IM9|FMT_LACJO Methionyl-tRNA formyltransferase OS=Lactobacillus johnsonii (strain
CNCM I-12250 / La1 / NCC 533) GN=fmt PE=3 SV=1
Length = 314
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ + L KFL+S +N+H LLP ++GG P
Sbjct: 84 ITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRGGAP 120
>sp|A0AJS8|FMT_LISW6 Methionyl-tRNA formyltransferase OS=Listeria welshimeri serovar 6b
(strain ATCC 35897 / DSM 20650 / SLCC5334) GN=fmt PE=3
SV=1
Length = 312
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ + IL L S IN+H LLP ++GG P
Sbjct: 83 VTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAP 119
>sp|B9DPM5|FMT_STACT Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=fmt PE=3 SV=1
Length = 310
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 195 EEELLELVQNTDFLV-LARYMQPVPLQK-------EAYLGYKLLES--------LSSKGS 238
EE+++ +V D V R M P P+++ E Y K+ +S +
Sbjct: 23 EEDVIAVVTQPDRPVGRKRVMTPPPVKEVALENGIEVYQPEKISQSDDLQTLIDMEPDLI 82
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279
+T+ F IL L + IN+H LLP ++GG P Q
Sbjct: 83 VTAAFGQILPKSLLDAPKLGAINVHASLLPKYRGGAPIHQA 123
>sp|Q044H0|FMT_LACGA Methionyl-tRNA formyltransferase OS=Lactobacillus gasseri (strain
ATCC 33323 / DSM 20243) GN=fmt PE=3 SV=1
Length = 314
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ + L KFL+S +N+H LLP ++GG P
Sbjct: 84 VTAAYGQFLPTKFLKSAKIAPVNVHGSLLPKYRGGAP 120
>sp|Q5M3I7|FMT_STRT2 Methionyl-tRNA formyltransferase OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=fmt PE=3 SV=1
Length = 311
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L SL + G +T+ + L K L S +N+H LLP ++GG P
Sbjct: 76 LISLGADGIVTAAYGQFLPSKLLDSM-DFAVNVHASLLPKYRGGAP 120
>sp|Q5LYX4|FMT_STRT1 Methionyl-tRNA formyltransferase OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=fmt PE=3 SV=1
Length = 311
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 230 LESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
L SL + G +T+ + L K L S +N+H LLP ++GG P
Sbjct: 76 LISLGADGIVTAAYGQFLPSKLLDSM-DFAVNVHASLLPKYRGGAP 120
>sp|Q5WDF8|SECA_BACSK Protein translocase subunit SecA OS=Bacillus clausii (strain
KSM-K16) GN=secA PE=3 SV=1
Length = 841
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 144 DFLYGWQEGKLPVEITCVISNHDRG----------PNSHVI-RFLERHGIPYHYLCAKEN 192
D +Y +GK + + H G S V+ + L R IP+H L AK +
Sbjct: 406 DLIYKTMQGKFNAVVNEIAELHKTGRPVLVGTVNVETSEVVSKMLTRKRIPHHVLNAKNH 465
Query: 193 EREEELLELVQNTDFLVLARYM 214
ERE E++E + + +A M
Sbjct: 466 EREAEIIEKAGHKGAVTIATNM 487
>sp|Q6F155|FMT_MESFL Methionyl-tRNA formyltransferase OS=Mesoplasma florum (strain ATCC
33453 / NBRC 100688 / NCTC 11704 / L1) GN=fmt PE=3 SV=1
Length = 313
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 26/120 (21%)
Query: 156 VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQ 215
VE+ VIS DR V R E P + K N + +Q
Sbjct: 28 VEVVLVISQPDR----PVGRKKELKPTPVKEIALKNN------------------LKIIQ 65
Query: 216 PVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
PV + + Y+ + + S +T + + K L D IN+H LLP ++GG P
Sbjct: 66 PVKISE----AYEEIAQIESDFIVTCAYGQFVPTKILDLPKIDSINVHGSLLPKYRGGAP 121
>sp|B3WEW9|FMT_LACCB Methionyl-tRNA formyltransferase OS=Lactobacillus casei (strain
BL23) GN=fmt PE=3 SV=1
Length = 318
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ + L KFL + +N+H LLP ++GG P
Sbjct: 84 VTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAP 120
>sp|Q02WP8|FMT_LACLS Methionyl-tRNA formyltransferase OS=Lactococcus lactis subsp.
cremoris (strain SK11) GN=fmt PE=3 SV=1
Length = 323
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 229 LLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
LLES G +T+ F L GK L + +N H LLP ++GG P
Sbjct: 81 LLES-GEVGIVTAAFGQFLPGKLL-DVARFAVNTHASLLPKYRGGAP 125
>sp|Q038H3|FMT_LACC3 Methionyl-tRNA formyltransferase OS=Lactobacillus casei (strain
ATCC 334) GN=fmt PE=3 SV=1
Length = 318
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 239 LTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275
+T+ + L KFL + +N+H LLP ++GG P
Sbjct: 84 VTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAP 120
>sp|P12040|PUR3_BACSU Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis
(strain 168) GN=purN PE=3 SV=2
Length = 195
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 238 SLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKG 272
+L Y +I L++YG +INIH LLP+F G
Sbjct: 85 ALAGYMRLI-GDTLLQAYGGKIINIHPSLLPAFPG 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,444,946
Number of Sequences: 539616
Number of extensions: 4829463
Number of successful extensions: 12198
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 12126
Number of HSP's gapped (non-prelim): 126
length of query: 306
length of database: 191,569,459
effective HSP length: 117
effective length of query: 189
effective length of database: 128,434,387
effective search space: 24274099143
effective search space used: 24274099143
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)