Query 021895
Match_columns 306
No_of_seqs 254 out of 2012
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 10:56:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1l_A Formyltetrahydrofolate 100.0 3.8E-56 1.3E-60 419.8 25.0 212 40-289 20-236 (302)
2 3lou_A Formyltetrahydrofolate 100.0 4.5E-56 1.5E-60 417.2 24.8 215 36-288 4-225 (292)
3 3n0v_A Formyltetrahydrofolate 100.0 8.6E-56 2.9E-60 414.1 26.3 211 39-288 5-220 (286)
4 3obi_A Formyltetrahydrofolate 100.0 9.9E-56 3.4E-60 414.0 21.6 212 40-288 4-220 (288)
5 3nrb_A Formyltetrahydrofolate 100.0 1.3E-55 4.4E-60 413.1 20.9 210 40-288 5-219 (287)
6 3p9x_A Phosphoribosylglycinami 100.0 1.2E-31 4.1E-36 241.9 14.2 124 128-284 2-131 (211)
7 3tqr_A Phosphoribosylglycinami 100.0 2.5E-31 8.7E-36 240.1 15.2 127 126-286 3-135 (215)
8 3kcq_A Phosphoribosylglycinami 100.0 2.7E-31 9.1E-36 239.9 15.0 127 126-286 6-134 (215)
9 4ds3_A Phosphoribosylglycinami 100.0 3.2E-31 1.1E-35 238.5 15.3 125 128-285 7-137 (209)
10 3da8_A Probable 5'-phosphoribo 100.0 1.3E-30 4.4E-35 235.5 15.2 128 124-286 8-141 (215)
11 1meo_A Phosophoribosylglycinam 100.0 6.2E-30 2.1E-34 229.5 15.0 124 129-285 1-130 (209)
12 1jkx_A GART;, phosphoribosylgl 100.0 6.4E-30 2.2E-34 229.6 14.3 123 129-284 1-129 (212)
13 3av3_A Phosphoribosylglycinami 100.0 2.4E-29 8.4E-34 225.4 15.3 127 128-287 3-135 (212)
14 3auf_A Glycinamide ribonucleot 100.0 3.9E-29 1.3E-33 227.2 14.7 132 122-286 16-153 (229)
15 2ywr_A Phosphoribosylglycinami 100.0 8.7E-29 3E-33 222.1 14.5 124 129-285 2-131 (216)
16 1fmt_A Methionyl-tRNA FMet for 99.9 7.4E-25 2.5E-29 206.7 11.1 118 127-283 2-130 (314)
17 2bln_A Protein YFBG; transfera 99.9 9.7E-25 3.3E-29 205.0 8.4 116 129-283 1-124 (305)
18 1z7e_A Protein aRNA; rossmann 99.9 1.8E-23 6.3E-28 209.6 11.7 118 129-285 1-126 (660)
19 3q0i_A Methionyl-tRNA formyltr 99.9 3.3E-23 1.1E-27 196.1 11.6 119 127-284 6-135 (318)
20 3rfo_A Methionyl-tRNA formyltr 99.9 1.6E-22 5.5E-27 191.3 13.3 118 126-282 2-130 (317)
21 3tqq_A Methionyl-tRNA formyltr 99.9 2.1E-22 7.3E-27 190.0 13.5 117 128-283 2-129 (314)
22 2bw0_A 10-FTHFDH, 10-formyltet 99.9 1.9E-22 6.4E-27 191.4 11.3 122 128-285 22-150 (329)
23 3p96_A Phosphoserine phosphata 99.8 7.7E-19 2.6E-23 166.7 14.7 161 38-215 8-181 (415)
24 1zpv_A ACT domain protein; str 99.6 1.5E-14 5.3E-19 110.4 11.2 75 40-117 3-77 (91)
25 2nyi_A Unknown protein; protei 99.6 3.6E-15 1.2E-19 130.6 7.9 79 37-117 88-170 (195)
26 1u8s_A Glycine cleavage system 99.6 3.2E-14 1.1E-18 123.0 12.8 73 41-117 5-77 (192)
27 2nyi_A Unknown protein; protei 99.5 4.5E-14 1.5E-18 123.6 10.6 74 39-116 2-79 (195)
28 1u8s_A Glycine cleavage system 99.5 2.9E-13 1E-17 117.0 11.0 80 37-117 88-173 (192)
29 1zgh_A Methionyl-tRNA formyltr 99.3 1.4E-12 4.8E-17 120.9 4.8 50 204-285 77-126 (260)
30 2ko1_A CTR148A, GTP pyrophosph 98.4 1.4E-06 4.9E-11 64.9 8.9 65 40-110 3-67 (88)
31 1y7p_A Hypothetical protein AF 98.0 1.4E-05 4.9E-10 72.9 8.8 138 41-215 3-156 (223)
32 3p96_A Phosphoserine phosphata 97.8 0.00022 7.6E-09 67.4 12.2 91 39-134 98-190 (415)
33 2f1f_A Acetolactate synthase i 97.6 7.4E-05 2.5E-09 64.9 6.3 52 40-91 1-52 (164)
34 2f06_A Conserved hypothetical 97.5 0.0015 5.1E-08 53.4 12.3 98 38-155 2-99 (144)
35 2re1_A Aspartokinase, alpha an 97.4 0.001 3.5E-08 56.4 10.1 110 37-155 20-133 (167)
36 2pc6_A Probable acetolactate s 97.3 0.00034 1.2E-08 60.8 6.2 67 40-108 2-68 (165)
37 2fgc_A Acetolactate synthase, 97.2 0.00095 3.3E-08 59.7 7.9 68 40-109 27-94 (193)
38 2dt9_A Aspartokinase; protein- 96.9 0.0074 2.5E-07 50.9 11.0 108 39-155 13-125 (167)
39 2jhe_A Transcription regulator 96.5 0.0035 1.2E-07 51.1 5.6 33 45-77 3-35 (190)
40 2f06_A Conserved hypothetical 96.4 0.0091 3.1E-07 48.7 7.3 58 43-108 73-130 (144)
41 1ygy_A PGDH, D-3-phosphoglycer 96.3 0.0061 2.1E-07 60.6 6.8 65 41-109 453-517 (529)
42 1sc6_A PGDH, D-3-phosphoglycer 96.2 0.015 5.1E-07 56.4 9.0 75 11-92 303-379 (404)
43 4go7_X Aspartokinase; transfer 95.7 0.015 5.2E-07 51.7 6.0 112 34-152 27-142 (200)
44 3s1t_A Aspartokinase; ACT doma 95.1 0.12 4.1E-06 44.6 9.7 104 41-152 15-123 (181)
45 4gmf_A Yersiniabactin biosynth 94.5 0.023 7.8E-07 54.3 3.8 71 124-211 3-73 (372)
46 2dtj_A Aspartokinase; protein- 94.4 0.13 4.4E-06 43.9 8.0 105 41-155 14-125 (178)
47 2re1_A Aspartokinase, alpha an 92.5 0.41 1.4E-05 40.2 7.7 62 40-114 101-165 (167)
48 3k5p_A D-3-phosphoglycerate de 92.2 0.32 1.1E-05 47.6 7.7 62 11-76 314-377 (416)
49 3mtj_A Homoserine dehydrogenas 91.8 0.36 1.2E-05 47.5 7.5 69 40-111 357-425 (444)
50 2dtj_A Aspartokinase; protein- 91.5 0.28 9.7E-06 41.7 5.7 64 39-115 92-158 (178)
51 3ab4_A Aspartokinase; aspartat 91.4 1.8 6.1E-05 41.6 11.8 105 43-155 265-374 (421)
52 2dt9_A Aspartokinase; protein- 89.9 1.1 3.8E-05 37.4 7.9 63 39-114 92-157 (167)
53 3rjz_A N-type ATP pyrophosphat 89.8 0.88 3E-05 41.3 7.7 80 128-210 4-96 (237)
54 3l76_A Aspartokinase; alloster 86.9 0.62 2.1E-05 47.3 5.1 94 38-137 440-536 (600)
55 1zhv_A Hypothetical protein AT 85.4 0.83 2.8E-05 38.3 4.4 35 43-77 63-100 (134)
56 4had_A Probable oxidoreductase 84.9 1.1 3.7E-05 40.8 5.3 71 126-212 21-94 (350)
57 3l76_A Aspartokinase; alloster 83.5 19 0.00065 36.4 14.2 129 43-182 271-418 (600)
58 1nvm_B Acetaldehyde dehydrogen 82.7 3 0.0001 38.7 7.3 74 127-212 3-79 (312)
59 2i6u_A Otcase, ornithine carba 82.4 12 0.0004 35.1 11.3 58 200-273 213-271 (307)
60 3mwb_A Prephenate dehydratase; 82.4 10 0.00034 35.8 10.9 70 40-112 199-270 (313)
61 3grf_A Ornithine carbamoyltran 82.2 5.3 0.00018 37.9 8.9 59 199-273 229-289 (328)
62 2qmw_A PDT, prephenate dehydra 82.1 6.2 0.00021 36.3 9.1 68 41-112 185-256 (267)
63 2qmx_A Prephenate dehydratase; 81.3 7.1 0.00024 36.2 9.3 68 41-111 199-267 (283)
64 4fb5_A Probable oxidoreductase 80.5 2.9 0.0001 37.8 6.3 74 127-212 24-102 (393)
65 1wy5_A TILS, hypothetical UPF0 80.3 4.7 0.00016 36.9 7.7 79 100-188 5-91 (317)
66 3s1t_A Aspartokinase; ACT doma 79.6 3.8 0.00013 35.1 6.4 63 40-115 94-159 (181)
67 1pvv_A Otcase, ornithine carba 79.0 12 0.00041 35.2 10.2 26 246-273 252-277 (315)
68 3luy_A Probable chorismate mut 79.0 11 0.00036 35.8 9.8 69 42-112 207-276 (329)
69 3loq_A Universal stress protei 78.9 7.1 0.00024 34.1 8.1 118 126-265 168-291 (294)
70 3idf_A USP-like protein; unive 78.8 19 0.00065 27.3 10.9 109 129-260 2-135 (138)
71 1vlv_A Otcase, ornithine carba 77.6 11 0.00037 35.7 9.5 54 200-273 232-291 (325)
72 3a06_A 1-deoxy-D-xylulose 5-ph 77.1 4.2 0.00014 39.6 6.5 76 129-211 4-92 (376)
73 3q2i_A Dehydrogenase; rossmann 77.1 3.7 0.00012 37.6 5.9 71 126-212 11-83 (354)
74 3dty_A Oxidoreductase, GFO/IDH 76.6 9.1 0.00031 35.7 8.6 72 127-212 11-93 (398)
75 1ni5_A Putative cell cycle pro 76.5 7.2 0.00025 37.6 8.0 61 128-188 13-80 (433)
76 3c1m_A Probable aspartokinase; 76.1 4 0.00014 39.9 6.2 49 39-91 315-366 (473)
77 3u3x_A Oxidoreductase; structu 76.0 8.7 0.0003 35.5 8.2 70 127-212 25-96 (361)
78 4gqa_A NAD binding oxidoreduct 75.6 3 0.0001 39.0 4.9 77 125-212 23-104 (412)
79 3gd5_A Otcase, ornithine carba 75.6 36 0.0012 32.1 12.4 59 199-273 220-279 (323)
80 3fwz_A Inner membrane protein 75.2 4.6 0.00016 32.0 5.3 71 126-211 5-78 (140)
81 4h3v_A Oxidoreductase domain p 74.1 5.2 0.00018 36.1 6.0 72 128-212 6-83 (390)
82 3ip3_A Oxidoreductase, putativ 73.0 10 0.00035 34.4 7.7 74 128-212 2-75 (337)
83 1phz_A Protein (phenylalanine 72.5 8.1 0.00028 38.2 7.3 67 42-112 34-101 (429)
84 3ohs_X Trans-1,2-dihydrobenzen 71.4 3.6 0.00012 37.3 4.3 72 128-212 2-74 (334)
85 3mah_A Aspartokinase; aspartat 70.7 8.5 0.00029 31.7 6.1 39 38-76 14-55 (157)
86 1zh8_A Oxidoreductase; TM0312, 70.5 8.7 0.0003 35.0 6.7 73 125-212 15-90 (340)
87 3t38_A Arsenate reductase; low 69.8 25 0.00084 31.2 9.3 84 125-215 78-164 (213)
88 3btv_A Galactose/lactose metab 69.8 11 0.00036 36.0 7.4 70 127-212 19-97 (438)
89 3moi_A Probable dehydrogenase; 69.7 6.6 0.00023 36.5 5.8 68 128-212 2-72 (387)
90 1zvp_A Hypothetical protein VC 69.5 5 0.00017 33.5 4.4 35 43-77 72-109 (133)
91 3cea_A MYO-inositol 2-dehydrog 69.1 17 0.00057 32.7 8.2 72 125-212 5-79 (346)
92 4ep1_A Otcase, ornithine carba 69.1 43 0.0015 31.9 11.3 59 199-273 242-300 (340)
93 2p2s_A Putative oxidoreductase 68.6 9.7 0.00033 34.4 6.5 69 128-212 4-74 (336)
94 3v5n_A Oxidoreductase; structu 68.5 9.2 0.00032 36.1 6.6 72 127-212 36-118 (417)
95 3e9m_A Oxidoreductase, GFO/IDH 68.2 8.4 0.00029 34.9 6.1 71 127-212 4-75 (330)
96 1tq8_A Hypothetical protein RV 68.1 34 0.0012 27.4 9.1 88 127-215 16-130 (163)
97 3evn_A Oxidoreductase, GFO/IDH 67.9 6.4 0.00022 35.6 5.2 69 127-212 4-75 (329)
98 3s2u_A UDP-N-acetylglucosamine 67.6 15 0.00051 33.7 7.7 79 128-213 2-101 (365)
99 3tvi_A Aspartokinase; structur 67.5 14 0.00047 36.2 7.7 81 43-137 299-383 (446)
100 3rc1_A Sugar 3-ketoreductase; 67.4 7.6 0.00026 35.7 5.6 67 127-212 26-97 (350)
101 3ec7_A Putative dehydrogenase; 67.2 15 0.00052 33.7 7.6 74 127-212 22-95 (357)
102 3mz0_A Inositol 2-dehydrogenas 66.7 17 0.00059 32.9 7.8 73 128-212 2-74 (344)
103 3dlo_A Universal stress protei 66.6 24 0.0008 28.1 7.8 87 128-215 24-128 (155)
104 2fhm_A Probable acylphosphatas 66.5 15 0.00052 28.0 6.3 59 101-163 16-74 (91)
105 3okp_A GDP-mannose-dependent a 66.4 28 0.00097 30.5 9.0 79 127-212 3-94 (394)
106 4go7_X Aspartokinase; transfer 66.2 9.3 0.00032 33.6 5.7 62 41-115 114-178 (200)
107 1r0k_A 1-deoxy-D-xylulose 5-ph 65.9 13 0.00044 36.1 7.1 56 128-189 4-61 (388)
108 3olq_A Universal stress protei 65.5 18 0.00063 31.5 7.5 68 173-264 233-305 (319)
109 3nkl_A UDP-D-quinovosamine 4-d 65.1 32 0.0011 26.6 8.2 36 127-165 3-38 (141)
110 4etn_A LMPTP, low molecular we 64.6 9.4 0.00032 33.0 5.4 82 126-214 32-120 (184)
111 3rsc_A CALG2; TDP, enediyne, s 64.5 33 0.0011 30.8 9.3 55 125-188 17-74 (415)
112 3tpf_A Otcase, ornithine carba 64.2 41 0.0014 31.4 10.0 55 200-273 210-268 (307)
113 2cwd_A Low molecular weight ph 64.0 15 0.00053 30.6 6.4 84 126-215 2-94 (161)
114 2nvw_A Galactose/lactose metab 64.0 15 0.00052 35.7 7.3 71 127-212 38-116 (479)
115 3c1m_A Probable aspartokinase; 63.9 15 0.00053 35.8 7.3 64 40-114 402-468 (473)
116 3tvi_A Aspartokinase; structur 63.5 18 0.00062 35.4 7.8 64 40-114 372-438 (446)
117 3uuw_A Putative oxidoreductase 63.5 8 0.00028 34.5 4.9 69 128-212 6-74 (308)
118 3keo_A Redox-sensing transcrip 62.9 7.7 0.00026 34.5 4.6 122 61-212 23-156 (212)
119 3mt0_A Uncharacterized protein 62.8 9.7 0.00033 33.2 5.2 68 173-264 204-276 (290)
120 3abi_A Putative uncharacterize 62.5 5.5 0.00019 36.8 3.7 71 126-212 14-85 (365)
121 3rh0_A Arsenate reductase; oxi 61.8 16 0.00054 30.5 6.1 82 123-211 15-99 (148)
122 3ic5_A Putative saccharopine d 61.8 36 0.0012 24.8 7.5 72 128-212 5-77 (118)
123 3ab4_A Aspartokinase; aspartat 61.7 24 0.0008 33.8 8.1 63 40-115 342-407 (421)
124 4gyw_A UDP-N-acetylglucosamine 61.1 15 0.0005 37.7 6.9 134 124-267 233-386 (723)
125 1ml4_A Aspartate transcarbamoy 61.1 37 0.0013 31.7 9.1 108 128-265 155-268 (308)
126 1p8a_A Protein tyrosine phosph 60.3 22 0.00076 29.0 6.7 84 127-215 3-90 (146)
127 1jl3_A Arsenate reductase; alp 60.2 20 0.00067 29.0 6.3 75 128-211 3-81 (139)
128 3tnj_A Universal stress protei 59.3 12 0.00041 28.9 4.6 87 128-215 6-120 (150)
129 3db2_A Putative NADPH-dependen 58.5 13 0.00043 33.9 5.3 71 127-212 4-74 (354)
130 1dxh_A Ornithine carbamoyltran 58.4 42 0.0014 31.8 9.0 51 200-270 220-277 (335)
131 4huj_A Uncharacterized protein 58.4 11 0.00039 32.1 4.7 66 128-212 23-89 (220)
132 1ulr_A Putative acylphosphatas 58.4 30 0.001 26.2 6.7 59 101-163 16-74 (88)
133 2ef0_A Ornithine carbamoyltran 57.8 47 0.0016 31.0 9.1 122 135-273 129-267 (301)
134 1u2p_A Ptpase, low molecular w 57.8 33 0.0011 28.4 7.4 82 127-215 3-93 (163)
135 1ydw_A AX110P-like protein; st 57.7 32 0.0011 31.4 7.9 72 126-212 4-79 (362)
136 3a2k_A TRNA(Ile)-lysidine synt 57.5 15 0.00051 35.6 5.9 61 127-188 17-85 (464)
137 1rwu_A Hypothetical UPF0250 pr 57.5 55 0.0019 26.3 8.4 62 42-111 36-101 (109)
138 3ezy_A Dehydrogenase; structur 57.3 20 0.00068 32.5 6.4 71 128-212 2-72 (344)
139 3qhp_A Type 1 capsular polysac 56.9 63 0.0021 24.9 8.6 92 130-234 4-96 (166)
140 4hkt_A Inositol 2-dehydrogenas 56.6 14 0.00049 33.2 5.3 68 128-212 3-71 (331)
141 3euw_A MYO-inositol dehydrogen 55.9 25 0.00087 31.7 6.9 68 127-212 3-73 (344)
142 1duv_G Octase-1, ornithine tra 55.6 53 0.0018 31.1 9.2 54 200-270 220-277 (333)
143 3beo_A UDP-N-acetylglucosamine 55.5 72 0.0025 27.8 9.6 82 127-212 7-103 (375)
144 3llv_A Exopolyphosphatase-rela 54.8 15 0.00052 28.4 4.6 69 128-211 6-77 (141)
145 3l9w_A Glutathione-regulated p 54.6 12 0.00043 35.8 4.8 50 128-188 4-54 (413)
146 4fzr_A SSFS6; structural genom 54.3 74 0.0025 28.5 9.7 54 126-188 13-69 (398)
147 2g1u_A Hypothetical protein TM 54.2 11 0.00037 30.2 3.7 77 122-212 13-92 (155)
148 3otg_A CALG1; calicheamicin, T 53.8 27 0.00091 31.3 6.6 56 125-189 17-75 (412)
149 3c85_A Putative glutathione-re 52.4 17 0.0006 29.5 4.7 70 128-211 39-112 (183)
150 1d1q_A Tyrosine phosphatase (E 51.8 35 0.0012 28.3 6.6 83 127-215 6-98 (161)
151 3tri_A Pyrroline-5-carboxylate 51.5 18 0.00061 32.3 5.0 67 128-212 3-71 (280)
152 3l4b_C TRKA K+ channel protien 51.4 14 0.00049 31.1 4.2 70 129-211 1-72 (218)
153 3k32_A Uncharacterized protein 51.3 28 0.00096 29.6 6.1 57 128-189 6-65 (203)
154 4amu_A Ornithine carbamoyltran 51.3 49 0.0017 31.8 8.3 55 200-271 247-304 (365)
155 2gm3_A Unknown protein; AT3G01 51.2 89 0.003 24.7 9.1 66 177-264 96-163 (175)
156 3e18_A Oxidoreductase; dehydro 51.2 20 0.00067 33.0 5.4 69 127-212 4-73 (359)
157 2wmy_A WZB, putative acid phos 51.1 44 0.0015 27.4 7.0 80 128-215 8-92 (150)
158 1jf8_A Arsenate reductase; ptp 50.9 27 0.00093 28.0 5.6 75 128-211 3-81 (131)
159 2cdq_A Aspartokinase; aspartat 50.6 29 0.00098 34.6 6.7 66 39-115 417-484 (510)
160 1k92_A Argininosuccinate synth 50.5 27 0.00092 34.5 6.5 60 125-189 7-72 (455)
161 1w2i_A Acylphosphatase; hydrol 50.1 32 0.0011 26.3 5.6 60 100-163 17-76 (91)
162 3oti_A CALG3; calicheamicin, T 49.9 59 0.002 29.2 8.3 52 127-188 19-73 (398)
163 1tlt_A Putative oxidoreductase 49.9 46 0.0016 29.6 7.5 69 127-212 4-73 (319)
164 1vmb_A 30S ribosomal protein S 49.1 54 0.0018 27.4 7.3 70 35-107 12-98 (140)
165 2l17_A Synarsc, arsenate reduc 48.6 16 0.00055 29.5 3.9 76 128-211 4-82 (134)
166 3o9z_A Lipopolysaccaride biosy 48.6 48 0.0016 29.9 7.5 70 127-212 2-80 (312)
167 3bl5_A Queuosine biosynthesis 48.5 40 0.0014 28.1 6.5 56 129-189 4-64 (219)
168 2ho3_A Oxidoreductase, GFO/IDH 47.2 50 0.0017 29.5 7.3 70 128-212 1-70 (325)
169 2der_A TRNA-specific 2-thiouri 47.1 30 0.001 32.9 6.1 58 127-189 16-86 (380)
170 3oj0_A Glutr, glutamyl-tRNA re 46.6 25 0.00087 27.5 4.7 69 128-213 21-89 (144)
171 1urr_A CG18505 protein; acylph 46.6 51 0.0017 25.7 6.4 61 100-164 24-85 (102)
172 3trg_A Acylphosphatase; fatty 46.5 39 0.0013 26.3 5.6 59 101-163 26-84 (98)
173 3s3t_A Nucleotide-binding prot 46.1 56 0.0019 24.7 6.5 87 128-215 5-119 (146)
174 4a8t_A Putrescine carbamoyltra 46.0 85 0.0029 29.8 9.0 26 246-273 273-298 (339)
175 2bjd_A Acylphosphatase; hypert 45.4 42 0.0015 26.2 5.7 62 98-163 25-86 (101)
176 3mah_A Aspartokinase; aspartat 44.4 25 0.00086 28.8 4.5 62 40-114 86-150 (157)
177 2dt5_A AT-rich DNA-binding pro 44.0 25 0.00086 30.8 4.7 86 61-165 19-114 (211)
178 1mjh_A Protein (ATP-binding do 43.7 46 0.0016 25.9 5.8 40 175-215 90-131 (162)
179 3oqb_A Oxidoreductase; structu 43.6 40 0.0014 30.9 6.2 75 126-213 4-92 (383)
180 4g65_A TRK system potassium up 43.6 22 0.00074 34.5 4.5 71 127-211 2-75 (461)
181 3ia7_A CALG4; glycosysltransfe 43.1 72 0.0025 28.2 7.6 52 128-188 4-58 (402)
182 2hma_A Probable tRNA (5-methyl 42.8 29 0.00098 32.9 5.2 58 127-189 8-78 (376)
183 4fgw_A Glycerol-3-phosphate de 42.8 12 0.00041 36.1 2.6 88 124-212 30-125 (391)
184 1zq6_A Otcase, ornithine carba 42.1 2E+02 0.0067 27.5 10.9 59 199-273 260-321 (359)
185 3hgm_A Universal stress protei 41.9 41 0.0014 25.5 5.1 42 173-215 75-121 (147)
186 2w37_A Ornithine carbamoyltran 41.6 2.4E+02 0.0081 27.0 11.4 52 200-270 241-298 (359)
187 1f0k_A MURG, UDP-N-acetylgluco 41.6 1.1E+02 0.0039 26.5 8.6 78 129-213 7-105 (364)
188 4dio_A NAD(P) transhydrogenase 41.3 81 0.0028 30.6 8.2 75 127-212 189-283 (405)
189 2ahr_A Putative pyrroline carb 41.2 17 0.0006 31.2 3.2 65 128-212 3-68 (259)
190 1h6d_A Precursor form of gluco 41.0 47 0.0016 31.5 6.4 52 126-183 81-132 (433)
191 3mt0_A Uncharacterized protein 40.9 1.7E+02 0.0059 25.1 10.6 116 128-264 7-128 (290)
192 4ekn_B Aspartate carbamoyltran 40.7 1.1E+02 0.0039 28.3 8.9 109 128-272 151-266 (306)
193 2fek_A Low molecular weight pr 40.3 58 0.002 27.4 6.2 79 128-214 22-105 (167)
194 2vh7_A Acylphosphatase-1; hydr 40.3 60 0.0021 25.0 5.9 58 101-162 22-80 (99)
195 3kzn_A Aotcase, N-acetylornith 40.1 2.4E+02 0.0083 26.5 13.3 62 199-273 260-321 (359)
196 2dum_A Hypothetical protein PH 39.7 1.3E+02 0.0046 23.4 8.7 68 176-265 86-157 (170)
197 2pjk_A 178AA long hypothetical 39.2 31 0.0011 29.3 4.4 74 125-215 12-92 (178)
198 3kjx_A Transcriptional regulat 39.0 1.3E+02 0.0045 26.3 8.7 109 100-210 39-153 (344)
199 4a8p_A Putrescine carbamoyltra 38.8 82 0.0028 30.1 7.6 26 246-273 251-276 (355)
200 2wja_A Putative acid phosphata 38.4 56 0.0019 27.6 5.8 79 129-215 27-110 (168)
201 4etm_A LMPTP, low molecular we 38.1 74 0.0025 26.9 6.6 86 125-215 15-109 (173)
202 3tsa_A SPNG, NDP-rhamnosyltran 37.7 1.2E+02 0.0039 27.0 8.1 51 128-187 1-54 (391)
203 3h6g_A Glutamate receptor, ion 37.6 2.2E+02 0.0075 25.3 11.8 123 44-188 72-198 (395)
204 2gv1_A Probable acylphosphatas 37.3 77 0.0026 24.1 6.0 57 102-162 19-76 (92)
205 3s5p_A Ribose 5-phosphate isom 37.1 93 0.0032 27.0 7.1 112 34-189 15-129 (166)
206 3jvi_A Protein tyrosine phosph 36.9 70 0.0024 26.6 6.2 83 127-215 3-94 (161)
207 3cis_A Uncharacterized protein 36.9 1.6E+02 0.0056 25.5 8.9 64 180-265 244-307 (309)
208 4f2g_A Otcase 1, ornithine car 36.6 81 0.0028 29.4 7.1 123 135-273 129-270 (309)
209 1v4v_A UDP-N-acetylglucosamine 36.5 1.4E+02 0.0047 26.3 8.4 82 128-213 5-100 (376)
210 2h9z_A Hypothetical protein HP 36.3 37 0.0013 25.9 4.0 62 42-111 15-78 (86)
211 3oa2_A WBPB; oxidoreductase, s 36.1 82 0.0028 28.4 7.0 70 127-212 2-81 (318)
212 2j5a_A 30S ribosomal protein S 35.4 1.2E+02 0.004 23.9 7.0 61 44-107 12-87 (110)
213 4egs_A Ribose 5-phosphate isom 35.4 42 0.0014 28.6 4.6 83 126-213 32-121 (180)
214 1tdj_A Biosynthetic threonine 35.1 27 0.00094 34.8 3.8 34 41-76 337-370 (514)
215 2glx_A 1,5-anhydro-D-fructose 34.9 64 0.0022 28.6 5.9 65 129-212 1-70 (332)
216 2y1e_A 1-deoxy-D-xylulose 5-ph 34.7 69 0.0024 31.4 6.5 83 126-214 19-115 (398)
217 1id1_A Putative potassium chan 34.7 70 0.0024 25.1 5.6 72 128-211 3-78 (153)
218 1zzg_A Glucose-6-phosphate iso 34.5 30 0.001 33.7 3.9 57 128-188 116-181 (415)
219 3r8n_F 30S ribosomal protein S 34.5 40 0.0014 26.2 4.0 55 50-107 16-79 (100)
220 3h4t_A Glycosyltransferase GTF 34.1 1.6E+02 0.0054 26.8 8.6 51 129-188 1-54 (404)
221 2r6j_A Eugenol synthase 1; phe 34.1 1.8E+02 0.0061 25.2 8.6 73 129-212 12-87 (318)
222 3cis_A Uncharacterized protein 33.9 2.3E+02 0.008 24.5 10.9 92 181-294 100-206 (309)
223 2cdq_A Aspartokinase; aspartat 33.8 82 0.0028 31.3 7.0 35 42-76 341-378 (510)
224 1jx6_A LUXP protein; protein-l 33.7 2.3E+02 0.008 24.5 10.3 48 100-148 16-65 (342)
225 3n8i_A Low molecular weight ph 33.7 82 0.0028 26.1 6.1 83 127-215 4-95 (157)
226 1sur_A PAPS reductase; assimil 33.5 42 0.0014 28.4 4.3 56 129-189 45-105 (215)
227 3d6n_B Aspartate carbamoyltran 33.4 1.1E+02 0.0037 28.4 7.4 116 139-273 125-257 (291)
228 2czc_A Glyceraldehyde-3-phosph 33.4 93 0.0032 28.6 6.9 51 128-186 2-53 (334)
229 3ecs_A Translation initiation 33.3 1.3E+02 0.0043 28.2 7.9 55 132-188 124-179 (315)
230 3bio_A Oxidoreductase, GFO/IDH 33.3 45 0.0015 30.1 4.7 34 127-164 8-42 (304)
231 3uhf_A Glutamate racemase; str 33.1 1.4E+02 0.0049 27.1 8.1 37 122-163 18-57 (274)
232 2w6k_A COBE; biosynthetic prot 33.1 98 0.0033 25.7 6.4 65 124-188 6-75 (145)
233 3dbi_A Sugar-binding transcrip 33.0 1E+02 0.0035 26.9 6.9 111 102-213 34-152 (338)
234 3s40_A Diacylglycerol kinase; 32.7 79 0.0027 28.4 6.2 13 126-138 6-18 (304)
235 3m2t_A Probable dehydrogenase; 32.3 28 0.00097 31.9 3.2 70 127-212 4-76 (359)
236 2iya_A OLEI, oleandomycin glyc 32.3 2.2E+02 0.0075 25.6 9.2 53 127-188 11-66 (424)
237 3mw8_A Uroporphyrinogen-III sy 32.2 63 0.0022 27.6 5.3 114 43-202 122-238 (240)
238 3ruf_A WBGU; rossmann fold, UD 31.9 1.9E+02 0.0063 25.3 8.4 75 128-213 25-109 (351)
239 2vsy_A XCC0866; transferase, g 31.7 3.1E+02 0.011 25.6 10.4 79 125-211 202-289 (568)
240 3r7f_A Aspartate carbamoyltran 31.7 1.9E+02 0.0064 26.9 8.7 114 139-273 126-256 (304)
241 3kbq_A Protein TA0487; structu 31.6 40 0.0014 28.9 3.9 69 128-218 3-76 (172)
242 1uv7_A General secretion pathw 31.1 2E+02 0.0067 22.8 7.7 64 51-124 21-84 (110)
243 2gi4_A Possible phosphotyrosin 30.7 95 0.0032 25.6 5.9 81 129-214 2-91 (156)
244 2lxf_A Uncharacterized protein 30.3 69 0.0023 26.2 4.9 76 82-164 32-107 (121)
245 3sty_A Methylketone synthase 1 30.2 2.1E+02 0.0071 22.8 10.1 98 32-150 3-101 (267)
246 3csu_A Protein (aspartate carb 30.1 2.8E+02 0.0097 25.7 9.7 71 171-265 196-267 (310)
247 1vl2_A Argininosuccinate synth 29.9 68 0.0023 31.3 5.6 58 127-189 13-74 (421)
248 1mkz_A Molybdenum cofactor bio 29.8 41 0.0014 28.2 3.6 68 127-217 9-82 (172)
249 3bbn_F Ribosomal protein S6; s 29.8 2.1E+02 0.0071 24.7 8.1 63 42-107 64-150 (168)
250 2h78_A Hibadh, 3-hydroxyisobut 29.8 43 0.0015 29.5 3.9 64 127-211 2-66 (302)
251 2pg3_A Queuosine biosynthesis 29.6 69 0.0024 27.3 5.1 55 129-188 3-63 (232)
252 3ab8_A Putative uncharacterize 29.5 2.1E+02 0.0071 24.0 8.1 98 174-294 80-189 (268)
253 2iyf_A OLED, oleandomycin glyc 29.4 2.4E+02 0.0083 25.3 9.0 52 128-188 7-61 (430)
254 2l82_A Designed protein OR32; 29.4 1.8E+02 0.006 24.3 7.2 132 42-202 2-145 (162)
255 3nvb_A Uncharacterized protein 29.2 1.4E+02 0.0048 28.7 7.6 60 125-211 19-83 (387)
256 2e18_A NH(3)-dependent NAD(+) 28.8 1.5E+02 0.0052 25.7 7.3 59 128-189 22-83 (257)
257 1jmv_A USPA, universal stress 28.7 59 0.002 24.5 4.0 41 173-215 69-112 (141)
258 2amj_A Modulator of drug activ 28.6 94 0.0032 26.3 5.7 54 174-227 40-95 (204)
259 3doj_A AT3G25530, dehydrogenas 28.6 42 0.0014 30.1 3.6 65 126-211 19-84 (310)
260 3o38_A Short chain dehydrogena 28.5 2.6E+02 0.0089 23.6 8.6 70 40-114 20-100 (266)
261 1xng_A NH(3)-dependent NAD(+) 28.5 1.3E+02 0.0045 26.4 6.9 57 128-188 25-86 (268)
262 2qv7_A Diacylglycerol kinase D 28.4 1.1E+02 0.0037 27.8 6.4 9 204-212 80-88 (337)
263 2l82_A Designed protein OR32; 27.6 89 0.003 26.1 5.1 81 130-212 3-85 (162)
264 2bon_A Lipid kinase; DAG kinas 27.6 1.5E+02 0.005 27.0 7.2 11 176-186 52-62 (332)
265 1y5e_A Molybdenum cofactor bio 27.6 77 0.0026 26.3 4.9 66 127-215 12-83 (169)
266 2q8n_A Glucose-6-phosphate iso 27.6 47 0.0016 32.7 4.0 57 128-188 140-204 (460)
267 1cqm_A Ribosomal protein S6; a 27.6 2.1E+02 0.0071 22.0 7.7 41 52-93 19-68 (101)
268 3d1l_A Putative NADP oxidoredu 27.5 34 0.0012 29.5 2.7 66 128-212 10-76 (266)
269 3rof_A Low molecular weight pr 27.2 91 0.0031 26.0 5.2 82 127-215 5-94 (158)
270 3rfq_A Pterin-4-alpha-carbinol 27.1 69 0.0024 27.6 4.6 70 124-215 26-100 (185)
271 3e8x_A Putative NAD-dependent 27.0 58 0.002 27.1 4.1 68 129-213 22-93 (236)
272 1xea_A Oxidoreductase, GFO/IDH 27.0 57 0.0019 29.1 4.2 69 128-212 2-71 (323)
273 1lss_A TRK system potassium up 26.9 1.9E+02 0.0066 21.3 8.5 71 128-211 4-76 (140)
274 2ioj_A Hypothetical protein AF 26.9 58 0.002 25.9 3.8 32 157-188 74-105 (139)
275 3gms_A Putative NADPH:quinone 26.6 1.6E+02 0.0054 26.3 7.1 74 126-211 143-220 (340)
276 3ggo_A Prephenate dehydrogenas 26.4 1.5E+02 0.005 26.9 6.9 120 128-270 33-157 (314)
277 3td9_A Branched chain amino ac 26.4 3.2E+02 0.011 23.7 10.8 33 44-76 82-114 (366)
278 1np3_A Ketol-acid reductoisome 26.3 75 0.0026 29.1 5.0 64 128-212 16-80 (338)
279 3gqv_A Enoyl reductase; medium 26.3 1.9E+02 0.0064 26.4 7.7 72 127-211 164-238 (371)
280 3sds_A Ornithine carbamoyltran 26.3 3.6E+02 0.012 25.6 9.8 117 127-271 187-312 (353)
281 3sm9_A Mglur3, metabotropic gl 26.2 4.1E+02 0.014 24.9 12.3 90 43-152 116-212 (479)
282 4ggo_A Trans-2-enoyl-COA reduc 26.1 2.1E+02 0.0072 27.9 8.2 82 126-210 48-146 (401)
283 1b7g_O Protein (glyceraldehyde 26.0 2.7E+02 0.0091 25.7 8.7 50 128-185 1-51 (340)
284 3p2y_A Alanine dehydrogenase/p 25.9 1.8E+02 0.0062 27.9 7.7 74 127-211 183-272 (381)
285 3au8_A 1-deoxy-D-xylulose 5-ph 25.8 1.7E+02 0.0056 29.5 7.5 83 125-211 74-180 (488)
286 3qk7_A Transcriptional regulat 25.7 2.5E+02 0.0086 23.8 8.0 110 99-228 25-149 (294)
287 3pzy_A MOG; ssgcid, seattle st 25.5 45 0.0015 27.9 3.0 68 127-215 6-77 (164)
288 3h5o_A Transcriptional regulat 25.4 1.4E+02 0.0047 26.2 6.3 13 126-138 60-72 (339)
289 2nz2_A Argininosuccinate synth 25.2 1.1E+02 0.0039 29.4 6.2 56 128-188 5-64 (413)
290 3p52_A NH(3)-dependent NAD(+) 25.1 2.2E+02 0.0076 25.1 7.7 79 98-189 5-88 (249)
291 3pj0_A LMO0305 protein; struct 25.0 1E+02 0.0035 26.8 5.4 55 56-112 304-358 (359)
292 1vbk_A Hypothetical protein PH 25.0 79 0.0027 29.0 4.8 79 128-214 179-265 (307)
293 4gmk_A Ribose-5-phosphate isom 24.9 82 0.0028 28.5 4.8 34 147-188 42-75 (228)
294 3gt0_A Pyrroline-5-carboxylate 24.8 33 0.0011 29.5 2.1 67 129-212 3-71 (247)
295 3i23_A Oxidoreductase, GFO/IDH 24.7 70 0.0024 29.0 4.4 67 128-212 2-73 (349)
296 3i1m_F 30S ribosomal protein S 24.5 88 0.003 25.9 4.6 55 50-107 16-79 (135)
297 2gas_A Isoflavone reductase; N 24.5 2.3E+02 0.0078 24.1 7.5 33 178-213 53-85 (307)
298 4gpa_A Glutamate receptor 4; P 24.2 3.5E+02 0.012 23.4 9.4 108 103-215 82-195 (389)
299 2ixa_A Alpha-N-acetylgalactosa 24.0 1.3E+02 0.0046 28.3 6.4 74 127-212 19-99 (444)
300 3e82_A Putative oxidoreductase 23.8 1.5E+02 0.005 27.1 6.4 67 126-212 5-75 (364)
301 3qwb_A Probable quinone oxidor 23.8 2.5E+02 0.0086 24.8 7.9 74 126-211 147-224 (334)
302 3fdx_A Putative filament prote 23.8 2.3E+02 0.0078 21.1 7.2 40 173-213 71-115 (143)
303 4dll_A 2-hydroxy-3-oxopropiona 23.7 81 0.0028 28.4 4.6 64 127-211 30-94 (320)
304 1x7d_A Ornithine cyclodeaminas 23.6 1.3E+02 0.0043 28.1 6.0 70 127-213 128-203 (350)
305 4ew6_A D-galactose-1-dehydroge 23.6 1.2E+02 0.0042 27.4 5.8 34 127-165 24-60 (330)
306 3i3w_A Phosphoglucosamine muta 23.6 4.8E+02 0.016 24.8 10.3 188 44-265 174-376 (443)
307 3fg9_A Protein of universal st 23.6 1.3E+02 0.0045 23.1 5.3 42 174-215 85-130 (156)
308 1vgv_A UDP-N-acetylglucosamine 23.6 1.6E+02 0.0053 25.8 6.3 81 129-213 1-95 (384)
309 3e3m_A Transcriptional regulat 23.5 1.7E+02 0.0058 25.8 6.6 87 102-188 43-133 (355)
310 8abp_A L-arabinose-binding pro 23.4 2.2E+02 0.0075 24.0 7.1 112 99-228 17-156 (306)
311 3v7e_A Ribosome-associated pro 23.4 52 0.0018 24.5 2.7 51 144-203 18-70 (82)
312 3ff1_A Glucose-6-phosphate iso 23.3 39 0.0013 33.3 2.6 74 96-189 117-200 (446)
313 1yb4_A Tartronic semialdehyde 23.0 59 0.002 28.2 3.4 62 128-211 3-65 (295)
314 4eye_A Probable oxidoreductase 22.9 3.3E+02 0.011 24.3 8.6 74 126-212 158-235 (342)
315 3i6i_A Putative leucoanthocyan 22.7 1.7E+02 0.0058 25.8 6.5 78 128-214 10-93 (346)
316 4e4t_A Phosphoribosylaminoimid 22.6 1.6E+02 0.0056 27.6 6.7 74 126-215 33-106 (419)
317 4es6_A Uroporphyrinogen-III sy 22.2 2.7E+02 0.0091 23.8 7.5 116 43-203 135-251 (254)
318 3r3h_A O-methyltransferase, SA 22.1 3.7E+02 0.013 22.9 9.2 95 127-237 60-164 (242)
319 4e5v_A Putative THUA-like prot 22.0 95 0.0032 28.2 4.7 21 256-277 86-106 (281)
320 1vb5_A Translation initiation 22.0 2E+02 0.0069 26.0 6.9 70 131-211 111-184 (276)
321 1vq3_A Phosphoribosylformylgly 22.0 2.8E+02 0.0097 21.6 6.9 62 39-113 14-80 (94)
322 2ywb_A GMP synthase [glutamine 21.7 2E+02 0.0068 28.0 7.2 56 129-189 210-270 (503)
323 3olq_A Universal stress protei 21.7 2.1E+02 0.0071 24.7 6.7 73 177-270 82-156 (319)
324 3jvd_A Transcriptional regulat 21.7 1.5E+02 0.0052 26.0 5.9 41 173-213 86-128 (333)
325 1qyc_A Phenylcoumaran benzylic 21.6 3.5E+02 0.012 22.9 8.1 77 128-213 4-86 (308)
326 2lbw_A H/ACA ribonucleoprotein 21.5 1.2E+02 0.0039 24.2 4.6 49 146-203 29-80 (121)
327 1js1_X Transcarbamylase; alpha 21.5 3.9E+02 0.013 25.1 8.9 117 138-273 145-281 (324)
328 3o74_A Fructose transport syst 21.3 3.4E+02 0.012 22.2 8.1 111 99-228 17-143 (272)
329 3hbm_A UDP-sugar hydrolase; PS 21.3 2.6E+02 0.009 25.1 7.5 73 129-215 1-80 (282)
330 1b0z_A Protein (phosphoglucose 21.0 89 0.003 30.6 4.5 73 96-188 114-196 (445)
331 3hbm_A UDP-sugar hydrolase; PS 21.0 2.7E+02 0.0092 25.1 7.5 77 128-214 157-235 (282)
332 2aif_A Ribosomal protein L7A; 20.9 1.3E+02 0.0044 24.5 4.9 50 145-203 49-101 (135)
333 2dph_A Formaldehyde dismutase; 20.8 1.5E+02 0.005 27.3 5.8 76 125-213 183-263 (398)
334 1q0q_A 1-deoxy-D-xylulose 5-ph 20.8 1.9E+02 0.0064 28.4 6.7 57 126-188 7-65 (406)
335 3k4h_A Putative transcriptiona 20.7 1.9E+02 0.0064 24.2 6.1 64 125-212 5-77 (292)
336 2pbq_A Molybdenum cofactor bio 20.7 90 0.0031 26.2 4.0 70 127-217 4-81 (178)
337 3rot_A ABC sugar transporter, 20.6 3.4E+02 0.012 22.9 7.8 111 99-228 18-153 (297)
338 3nbm_A PTS system, lactose-spe 20.5 1.8E+02 0.0063 22.7 5.6 65 125-189 3-86 (108)
339 3gk3_A Acetoacetyl-COA reducta 20.5 1.6E+02 0.0054 25.2 5.7 78 31-114 14-102 (269)
340 2wm3_A NMRA-like family domain 20.4 4E+02 0.014 22.6 8.8 73 128-212 5-80 (299)
341 3c1a_A Putative oxidoreductase 20.4 2.4E+02 0.008 24.9 6.9 38 124-165 6-44 (315)
342 1e2b_A Enzyme IIB-cellobiose; 20.4 73 0.0025 24.8 3.1 39 173-215 23-61 (106)
343 2qh8_A Uncharacterized protein 20.1 2.5E+02 0.0085 24.1 6.9 22 126-147 6-27 (302)
344 2fqx_A Membrane lipoprotein TM 20.1 1.2E+02 0.0043 26.8 5.0 11 204-214 62-72 (318)
No 1
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=3.8e-56 Score=419.82 Aligned_cols=212 Identities=37% Similarity=0.581 Sum_probs=191.2
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccce
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~ 119 (306)
++++|||++||||+||||+||++|+++||||+|++|+++..+|+||||++|+.++...+.++|+++|++++++++|.
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~m~--- 96 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFSMD--- 96 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHTCE---
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhCCe---
Confidence 56799999999999999999999999999999999999888999999999998765578999999999999999963
Q ss_pred eeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCC--hHH
Q 021895 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENE--REE 196 (306)
Q Consensus 120 ~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~--~e~ 196 (306)
|++.+.++++||+||+||+||||++||++++.|+++++|++|||||++ +.++|+++|||+++++.+ .++ .|+
T Consensus 97 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~r~~~~~ 171 (302)
T 3o1l_A 97 WRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQD-----LRSMVEWHDIPYYHVPVDPKDKEPAFA 171 (302)
T ss_dssp EEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSST-----THHHHHTTTCCEEECCCCSSCCHHHHH
T ss_pred eeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHH-----HHHHHHHcCCCEEEcCCCcCCHHHHHH
Confidence 667888889999999999999999999999999999999999999953 367899999999998743 222 246
Q ss_pred HHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCc
Q 021895 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (306)
Q Consensus 197 e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~ 274 (306)
+++++++ ++|++||||||| ||+++|++.|++++|||||||||+|+|++
T Consensus 172 ~~~~~l~~~~~DliVlagym~------------------------------IL~~~~l~~~~~~~INiHpSlLP~frG~~ 221 (302)
T 3o1l_A 172 EVSRLVGHHQADVVVLARYMQ------------------------------ILPPQLCREYAHQVINIHHSFLPSFVGAK 221 (302)
T ss_dssp HHHHHHHHTTCSEEEESSCCS------------------------------CCCTTHHHHTTTCEEEEESSCTTSSCSSC
T ss_pred HHHHHHHHhCCCEEEHhHhhh------------------------------hcCHHHHhhhhCCeEEeCcccccCCCCcc
Confidence 7888887 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCce
Q 021895 275 PAKQVGCFTFCLGNL 289 (306)
Q Consensus 275 p~~~A~~~~~~l~~~ 289 (306)
|++||+....+.-|+
T Consensus 222 p~~~Ai~~G~k~tG~ 236 (302)
T 3o1l_A 222 PYHQASLRGVKLIGA 236 (302)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCeEEE
Confidence 999998776554443
No 2
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=4.5e-56 Score=417.24 Aligned_cols=215 Identities=27% Similarity=0.483 Sum_probs=188.7
Q ss_pred CCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeC--CCCCCHHHHHHHHHHHHhhh
Q 021895 36 VSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFD--PIKWPREQMDEDFFKLSKMF 113 (306)
Q Consensus 36 ~~p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~--~~~~~~eeLreaL~~la~el 113 (306)
|+..+++++||++||||+||||+||++|+++||||+|++|+.+..+|+||||++|+.+ +...+.++|+++|+++++++
T Consensus 4 ~~~~~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~~ 83 (292)
T 3lou_A 4 VPQRPHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAERF 83 (292)
T ss_dssp ----CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHHH
T ss_pred CcCCCCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHhc
Confidence 4555678999999999999999999999999999999999988889999999999987 43568999999999999999
Q ss_pred hcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCC
Q 021895 114 NAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE 193 (306)
Q Consensus 114 gl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~ 193 (306)
+|. |++.+.++++||+||+||+||||++||++++.|+++++|++|||||++ + ..+|+++|||+++++.+...
T Consensus 84 ~m~---~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~---~--~~~A~~~gIp~~~~~~~~~~ 155 (292)
T 3lou_A 84 RMQ---WAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPD---F--APLAAQHGLPFRHFPITADT 155 (292)
T ss_dssp TCE---EEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSST---T--HHHHHHTTCCEEECCCCSSC
T ss_pred CcE---EEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHH---H--HHHHHHcCCCEEEeCCCcCC
Confidence 973 677888889999999999999999999999999999999999999953 3 46799999999998843333
Q ss_pred h---HHHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCC
Q 021895 194 R---EEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLP 268 (306)
Q Consensus 194 ~---e~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP 268 (306)
+ |++++++++ ++|++||||||| ||+++|++.|++++|||||||||
T Consensus 156 r~~~~~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l~~~~~~~iNiHpSlLP 205 (292)
T 3lou_A 156 KAQQEAQWLDVFETSGAELVILARYMQ------------------------------VLSPEASARLANRAINIHHSFLP 205 (292)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHhCCCEEEecCchh------------------------------hCCHHHHhhhcCCeEEeCCCcCc
Confidence 3 467888887 899999999999 99999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhcCc
Q 021895 269 SFKGGKPAKQVGCFTFCLGN 288 (306)
Q Consensus 269 ~f~Ga~p~~~A~~~~~~l~~ 288 (306)
+|+|++|++||+......-|
T Consensus 206 ~~rG~~p~~~Ai~~G~~~~G 225 (292)
T 3lou_A 206 GFKGAKPYHQAHARGVKLIG 225 (292)
T ss_dssp CCCSSCHHHHHHHHTCSEEE
T ss_pred CCCCccHHHHHHHcCCCeEE
Confidence 99999999999776554433
No 3
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=8.6e-56 Score=414.06 Aligned_cols=211 Identities=27% Similarity=0.461 Sum_probs=189.7
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccc
Q 021895 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (306)
Q Consensus 39 ~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~ 118 (306)
.+++++||++||||+||||+||++|+++||||+|++|+.+..+|+||||++|+.++ ..+.++|+++|+++++++++.
T Consensus 5 ~~~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~~~~~~L~~~f~~la~~l~m~-- 81 (286)
T 3n0v_A 5 APDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-DFDEAGFRAGLAERSEAFGMA-- 81 (286)
T ss_dssp --CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-SCCHHHHHHHHHHHHGGGTCE--
T ss_pred cCCcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-CCCHHHHHHHHHHHHHHcCCE--
Confidence 35679999999999999999999999999999999999888899999999999876 678999999999999999973
Q ss_pred eeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCCh---H
Q 021895 119 VVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---E 195 (306)
Q Consensus 119 ~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~---e 195 (306)
|++.+.++++||+||+||+||||++||++++.|+++++|++|||||++ +..+|+++|||+++++.+...+ |
T Consensus 82 -~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-----~~~~A~~~gIp~~~~~~~~~~r~~~~ 155 (286)
T 3n0v_A 82 -FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPD-----LEPLAHWHKIPYYHFALDPKDKPGQE 155 (286)
T ss_dssp -EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSST-----THHHHHHTTCCEEECCCBTTBHHHHH
T ss_pred -EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHH-----HHHHHHHcCCCEEEeCCCcCCHHHHH
Confidence 678888899999999999999999999999999999999999999954 3567999999999987433333 4
Q ss_pred HHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 196 EELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 196 ~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
++++++++ ++|++|+||||| ||+++|++.|++++|||||||||+|+|+
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~ 205 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYMQ------------------------------VLSPELCRRLDGWAINIHHSLLPGFKGA 205 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEECSSTTCCCS
T ss_pred HHHHHHHHhcCCCEEEeccccc------------------------------ccCHHHHhhhcCCeEEeccccccCCCCc
Confidence 67888887 899999999999 9999999999999999999999999999
Q ss_pred cHHHHHHHHHhhcCc
Q 021895 274 KPAKQVGCFTFCLGN 288 (306)
Q Consensus 274 ~p~~~A~~~~~~l~~ 288 (306)
+|++||+......-|
T Consensus 206 ~p~~~Ai~~G~~~~G 220 (286)
T 3n0v_A 206 KPYHQAYNKGVKMVG 220 (286)
T ss_dssp CHHHHHHHHTCSEEE
T ss_pred cHHHHHHHcCCCeEE
Confidence 999999776655433
No 4
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=9.9e-56 Score=413.98 Aligned_cols=212 Identities=32% Similarity=0.507 Sum_probs=190.6
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccce
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~ 119 (306)
+.+++||++||||+||||+||++|+++||||+|++|+.+..+|+||||++|++++...+.++|+++|++++++++|.
T Consensus 4 ~~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~m~--- 80 (288)
T 3obi_A 4 HHQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTMG--- 80 (288)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTCE---
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcCCE---
Confidence 34699999999999999999999999999999999998888999999999999876678999999999999999973
Q ss_pred eeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCCh---HH
Q 021895 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---EE 196 (306)
Q Consensus 120 ~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~---e~ 196 (306)
|++.+.++++||+||+||+||||++||++++.|+++++|++|||||+. .+.++|+++|||+++++.+...+ |+
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~----~~~~~A~~~gIp~~~~~~~~~~r~~~~~ 156 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPR----ETFSGFDFGDIPFYHFPVNKDTRRQQEA 156 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCG----GGSCCTTTTTCCEEECCCCTTTHHHHHH
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCCh----hHHHHHHHcCCCEEEeCCCcccHHHHHH
Confidence 677888889999999999999999999999999999999999999931 24678999999999988543333 46
Q ss_pred HHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCc
Q 021895 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (306)
Q Consensus 197 e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~ 274 (306)
+++++++ ++|++||||||| ||+++|++.|++++|||||||||+|+|++
T Consensus 157 ~~~~~l~~~~~Dlivlagy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~ 206 (288)
T 3obi_A 157 AITALIAQTHTDLVVLARYMQ------------------------------ILSDEMSARLAGRCINIHHSFLPGFKGAK 206 (288)
T ss_dssp HHHHHHHHHTCCEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEEEECSSCCCSSC
T ss_pred HHHHHHHhcCCCEEEhhhhhh------------------------------hCCHHHHhhhcCCeEEeCcccccCCCCch
Confidence 7888887 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCc
Q 021895 275 PAKQVGCFTFCLGN 288 (306)
Q Consensus 275 p~~~A~~~~~~l~~ 288 (306)
|++||+....+.-|
T Consensus 207 p~~~A~~~G~~~~G 220 (288)
T 3obi_A 207 PYHQAFDRGVKLIG 220 (288)
T ss_dssp HHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 99999776655443
No 5
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=1.3e-55 Score=413.07 Aligned_cols=210 Identities=32% Similarity=0.498 Sum_probs=187.4
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccce
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSV 119 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~ 119 (306)
.++++||++||||+||||+||++|+++||||+|++|+.+..+|+||||++|+.++ .+.++|+++|++++++++|.
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~~~~~L~~~f~~la~~~~m~--- 79 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV--AGVNDFNSAFGKVVEKYNAE--- 79 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC-----CHHHHHHHHHHGGGTCE---
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC--CCHHHHHHHHHHHHHHcCCe---
Confidence 5679999999999999999999999999999999999888899999999999865 35679999999999999973
Q ss_pred eeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCCh---HH
Q 021895 120 VRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---EE 196 (306)
Q Consensus 120 ~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~---e~ 196 (306)
|++.+.++++||+||+||+||||++|++++++|+++++|++|||||++ + +.++|+++|||+++++.+...+ |+
T Consensus 80 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~---a-~~~~A~~~gIp~~~~~~~~~~r~~~~~ 155 (287)
T 3nrb_A 80 WWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPR---E-ALSVSLVGDIPFHYLPVTPATKAAQES 155 (287)
T ss_dssp EEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCG---G-GCCCCCCTTSCEEECCCCGGGHHHHHH
T ss_pred eEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChH---H-HHHHHHHcCCCEEEEeccCcchhhHHH
Confidence 677888889999999999999999999999999999999999999943 3 6788999999999988433222 46
Q ss_pred HHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCc
Q 021895 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (306)
Q Consensus 197 e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~ 274 (306)
+++++++ ++|++||||||| ||+++|++.|++++|||||||||+|+|++
T Consensus 156 ~~~~~l~~~~~Dlivlagym~------------------------------il~~~~l~~~~~~~iNiHpSlLP~~rG~~ 205 (287)
T 3nrb_A 156 QIKNIVTQSQADLIVLARYMQ------------------------------ILSDDLSAFLSGRCINIHHSFLPGFKGAK 205 (287)
T ss_dssp HHHHHHHHHTCSEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTTTCSSC
T ss_pred HHHHHHHHhCCCEEEhhhhhh------------------------------hcCHHHHhhccCCeEEECcccccCCCCch
Confidence 7888887 899999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCc
Q 021895 275 PAKQVGCFTFCLGN 288 (306)
Q Consensus 275 p~~~A~~~~~~l~~ 288 (306)
|++||+....+.-|
T Consensus 206 p~~~Ai~~G~k~tG 219 (287)
T 3nrb_A 206 PYHQAHTRGVKLIG 219 (287)
T ss_dssp HHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCeEE
Confidence 99999777655444
No 6
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=99.97 E-value=1.2e-31 Score=241.88 Aligned_cols=124 Identities=29% Similarity=0.478 Sum_probs=111.7
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHHHHHHhc
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e~~~~v~ 203 (306)
++|||||+||+|+||++|+++++.|+++++|++||||+ ++++++++|+++|||+++++.+ .+.+ |+++++.++
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~---~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 78 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDK---PGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLK 78 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESC---SSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECC---CCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHH
Confidence 46999999999999999999999999999999999998 5789999999999999998743 3333 467888886
Q ss_pred --CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHH
Q 021895 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGC 281 (306)
Q Consensus 204 --~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~ 281 (306)
++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++||+.
T Consensus 79 ~~~~Dliv~agy~~------------------------------Il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 128 (211)
T 3p9x_A 79 EKQIDFVVLAGYMR------------------------------LVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIR 128 (211)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHHTTSEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEeCchh------------------------------hcCHHHHhhccCCeEEECCccCCCCCCccHHHHHHH
Confidence 899999999999 999999999999999999999999999999999965
Q ss_pred HHh
Q 021895 282 FTF 284 (306)
Q Consensus 282 ~~~ 284 (306)
..-
T Consensus 129 ~G~ 131 (211)
T 3p9x_A 129 ANV 131 (211)
T ss_dssp TTC
T ss_pred cCC
Confidence 543
No 7
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=99.97 E-value=2.5e-31 Score=240.07 Aligned_cols=127 Identities=27% Similarity=0.389 Sum_probs=112.4
Q ss_pred CCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHHHHHH
Q 021895 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLEL 201 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e~~~~ 201 (306)
++++|||||+||+|+||++|++++++| ++++|++||||+ ++++++++|+++|||+++++.+ ...+ |+++.+.
T Consensus 3 ~~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~---~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 78 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNR---ADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKT 78 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESC---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCC---cchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHH
Confidence 357899999999999999999999999 999999999998 4578899999999999998743 2333 4678888
Q ss_pred hc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHH
Q 021895 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQV 279 (306)
Q Consensus 202 v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A 279 (306)
++ ++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++||
T Consensus 79 l~~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~A 128 (215)
T 3tqr_A 79 IDHYDPKLIVLAGFMR------------------------------KLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERA 128 (215)
T ss_dssp HHTTCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHH
T ss_pred HHhcCCCEEEEccchh------------------------------hCCHHHHhhccCCeEEeCcccCCCCCChhHHHHH
Confidence 87 899999999999 9999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 021895 280 GCFTFCL 286 (306)
Q Consensus 280 ~~~~~~l 286 (306)
+...-..
T Consensus 129 i~~G~~~ 135 (215)
T 3tqr_A 129 LAAGETE 135 (215)
T ss_dssp HHTTCSE
T ss_pred HHcCCCe
Confidence 6554433
No 8
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=99.97 E-value=2.7e-31 Score=239.94 Aligned_cols=127 Identities=29% Similarity=0.433 Sum_probs=112.0
Q ss_pred CCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--
Q 021895 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~-- 203 (306)
++++||+||+||+|+||+++++++++|+++++|++||||+ ++++++++|+++|||+++++.+.. .++++.+.++
T Consensus 6 ~~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~---~~a~~l~~A~~~gIp~~~~~~~~~-~~~~~~~~L~~~ 81 (215)
T 3kcq_A 6 KKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNN---AEARGLLIAQSYGIPTFVVKRKPL-DIEHISTVLREH 81 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCBTTB-CHHHHHHHHHHT
T ss_pred CCCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCC---cchHHHHHHHHcCCCEEEeCcccC-ChHHHHHHHHHh
Confidence 4678999999999999999999999999999999999998 456789999999999999874322 2467778886
Q ss_pred CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHHHH
Q 021895 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGCFT 283 (306)
Q Consensus 204 ~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~~~ 283 (306)
++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++||+...
T Consensus 82 ~~Dlivlagy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 82 DVDLVCLAGFMS------------------------------ILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp TCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHT
T ss_pred CCCEEEEeCCce------------------------------EeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcC
Confidence 899999999999 99999999999999999999999999999999997665
Q ss_pred hhc
Q 021895 284 FCL 286 (306)
Q Consensus 284 ~~l 286 (306)
...
T Consensus 132 ~~~ 134 (215)
T 3kcq_A 132 VKI 134 (215)
T ss_dssp CSE
T ss_pred CCe
Confidence 443
No 9
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=99.97 E-value=3.2e-31 Score=238.49 Aligned_cols=125 Identities=26% Similarity=0.425 Sum_probs=112.1
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCC-CCh---HHHHHHHhc
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE-NER---EEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~-~~~---e~e~~~~v~ 203 (306)
++||+||+||+|+||+++++++++|+++++|++||||+ ++++++++|+++|||+++++.+. ..+ |+++.+.++
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~---~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~ 83 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDK---AEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALD 83 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESC---TTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECC---cccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999998 45678999999999999987432 333 467888887
Q ss_pred --CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHH
Q 021895 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGC 281 (306)
Q Consensus 204 --~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~ 281 (306)
++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++||+.
T Consensus 84 ~~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 133 (209)
T 4ds3_A 84 VLKPDIICLAGYMR------------------------------LLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALD 133 (209)
T ss_dssp HHCCSEEEESSCCS------------------------------CCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHHH
T ss_pred hcCCCEEEEecccc------------------------------CcCHHHHhhccCCeEEECCccccCCCChhHHHHHHH
Confidence 899999999999 999999999999999999999999999999999965
Q ss_pred HHhh
Q 021895 282 FTFC 285 (306)
Q Consensus 282 ~~~~ 285 (306)
..-.
T Consensus 134 ~G~~ 137 (209)
T 4ds3_A 134 AGMK 137 (209)
T ss_dssp TTCS
T ss_pred cCCC
Confidence 5443
No 10
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=99.97 E-value=1.3e-30 Score=235.46 Aligned_cols=128 Identities=20% Similarity=0.302 Sum_probs=111.9
Q ss_pred CCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHHHH
Q 021895 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELL 199 (306)
Q Consensus 124 ~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e~~ 199 (306)
..+.++||+||+||+|+||++|++++.. +++++|++||||+| ++++++|+++|||+++++.+ ...+ |+++.
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~~----a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~ 82 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDRE----CRAAEIAAEASVPVFTVRLADHPSRDAWDVAIT 82 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESSC----CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHH
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCCc----hHHHHHHHHcCCCEEEeCcccccchhhhhHHHH
Confidence 4467889999999999999999999865 68899999999984 57899999999999998743 2233 46788
Q ss_pred HHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHH
Q 021895 200 ELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAK 277 (306)
Q Consensus 200 ~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~ 277 (306)
+.++ ++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++
T Consensus 83 ~~l~~~~~Dlivlagy~~------------------------------iL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~ 132 (215)
T 3da8_A 83 AATAAHEPDLVVSAGFMR------------------------------ILGPQFLSRFYGRTLNTHPALLPAFPGTHGVA 132 (215)
T ss_dssp HHHHTTCCSEEEEEECCS------------------------------CCCHHHHHHHTTTEEEEESSCTTSSCSTTHHH
T ss_pred HHHHhhCCCEEEEcCchh------------------------------hCCHHHHhhccCCeEEeCcccccCCCCchHHH
Confidence 8886 899999999999 99999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 021895 278 QVGCFTFCL 286 (306)
Q Consensus 278 ~A~~~~~~l 286 (306)
||+...-..
T Consensus 133 ~Ai~~G~~~ 141 (215)
T 3da8_A 133 DALAYGVKV 141 (215)
T ss_dssp HHHHHTCSE
T ss_pred HHHHcCCCe
Confidence 996655433
No 11
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=99.97 E-value=6.2e-30 Score=229.47 Aligned_cols=124 Identities=31% Similarity=0.433 Sum_probs=110.1
Q ss_pred ceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHHHHHHhc-
Q 021895 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 203 (306)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e~~~~v~- 203 (306)
+|||||+||+|+||++|+++++.|+++++|++||||+| ++.++++|+++|||++++..+ ...+ ++++.+.++
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKA---AVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE 77 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESST---TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCC---ChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh
Confidence 48999999999999999999999999999999999995 457899999999999987742 3333 357778886
Q ss_pred -CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHHH
Q 021895 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGCF 282 (306)
Q Consensus 204 -~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~~ 282 (306)
++|++|+||||+ ||+++|++.|+.++||+||||||+|||++|++||+..
T Consensus 78 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~ 127 (209)
T 1meo_A 78 FSIDIVCLAGFMR------------------------------ILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALET 127 (209)
T ss_dssp TTCCEEEEESCCS------------------------------CCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHH
T ss_pred cCCCEEEEcchhh------------------------------hCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999655
Q ss_pred Hhh
Q 021895 283 TFC 285 (306)
Q Consensus 283 ~~~ 285 (306)
.-.
T Consensus 128 G~~ 130 (209)
T 1meo_A 128 GVT 130 (209)
T ss_dssp TCS
T ss_pred CCC
Confidence 443
No 12
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=99.96 E-value=6.4e-30 Score=229.59 Aligned_cols=123 Identities=28% Similarity=0.394 Sum_probs=110.3
Q ss_pred ceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCC-CCCCh---HHHHHHHhc-
Q 021895 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KENER---EEELLELVQ- 203 (306)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~-k~~~~---e~e~~~~v~- 203 (306)
+||+||+||+|+||++|+++++.|+++++|++||||++ ++.++++|+++|||+++++. +.+.+ ++++.+.++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKA---DAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCT---TCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCC---chHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 48999999999999999999999999999999999984 56899999999999999873 22333 467888887
Q ss_pred -CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHHH
Q 021895 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGCF 282 (306)
Q Consensus 204 -~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~~ 282 (306)
++|++|+||||+ ||+++|++.|+.++||+||||||+|||++|++||+..
T Consensus 78 ~~~Dliv~agy~~------------------------------il~~~~l~~~~~~~iNiHpSlLP~yrG~~pi~~ai~~ 127 (212)
T 1jkx_A 78 YAPDVVVLAGFMR------------------------------ILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALEN 127 (212)
T ss_dssp GCCSEEEESSCCS------------------------------CCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHT
T ss_pred cCCCEEEEeChhh------------------------------hCCHHHHhhccCCEEEEccCcccCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999654
Q ss_pred Hh
Q 021895 283 TF 284 (306)
Q Consensus 283 ~~ 284 (306)
.-
T Consensus 128 G~ 129 (212)
T 1jkx_A 128 GD 129 (212)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 13
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=99.96 E-value=2.4e-29 Score=225.38 Aligned_cols=127 Identities=25% Similarity=0.442 Sum_probs=112.2
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHHHHHHhc
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e~~~~v~ 203 (306)
++||+||+||+++|++++|+++.++.++++|++||||+ ++++++++|+++|||+++++.+ ...+ |+++.+.++
T Consensus 3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~---~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~ 79 (212)
T 3av3_A 3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDR---PGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELK 79 (212)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESS---TTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCC---CCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHH
Confidence 57999999999999999999999998899999999998 4568999999999999987743 2333 457788886
Q ss_pred --CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHH
Q 021895 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGC 281 (306)
Q Consensus 204 --~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~ 281 (306)
++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++||+.
T Consensus 80 ~~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~ 129 (212)
T 3av3_A 80 GRQIDWIALAGYMR------------------------------LIGPTLLSAYEGKIVNIHPSLLPAFPGKDAIGQAYR 129 (212)
T ss_dssp HTTCCEEEESSCCS------------------------------CCCHHHHHHTTTCEEEEESSCTTSSCSTTHHHHHHH
T ss_pred hcCCCEEEEchhhh------------------------------hCCHHHHhhhcCCEEEEecCcCCCCCCcCHHHHHHH
Confidence 899999999999 999999999999999999999999999999999966
Q ss_pred HHhhcC
Q 021895 282 FTFCLG 287 (306)
Q Consensus 282 ~~~~l~ 287 (306)
..-..-
T Consensus 130 ~G~~~t 135 (212)
T 3av3_A 130 AGVSET 135 (212)
T ss_dssp HTCSEE
T ss_pred cCCCeE
Confidence 554433
No 14
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=99.96 E-value=3.9e-29 Score=227.21 Aligned_cols=132 Identities=26% Similarity=0.393 Sum_probs=115.6
Q ss_pred ecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHH
Q 021895 122 VPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEE 197 (306)
Q Consensus 122 l~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e 197 (306)
+.+.++++||+||+||+++|++++|+++.++.++++|++||||+ ++++++++|+++|||+++++.+ .+.+ |++
T Consensus 16 ~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~---~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~ 92 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDR---ADAYGLERARRAGVDALHMDPAAYPSRTAFDAA 92 (229)
T ss_dssp SSCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESS---TTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHH
T ss_pred ccccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCC---CchHHHHHHHHcCCCEEEECcccccchhhccHH
Confidence 45566788999999999999999999999998889999999998 4568999999999999987743 2333 467
Q ss_pred HHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcH
Q 021895 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (306)
Q Consensus 198 ~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p 275 (306)
+.+.++ ++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|
T Consensus 93 ~~~~l~~~~~Dliv~agy~~------------------------------IL~~~~l~~~~~~~iNiHpSLLP~yrG~~p 142 (229)
T 3auf_A 93 LAERLQAYGVDLVCLAGYMR------------------------------LVRGPMLTAFPNRILNIHPSLLPAFPGLEA 142 (229)
T ss_dssp HHHHHHHTTCSEEEESSCCS------------------------------CCCHHHHHHSTTCEEEEESSCTTSSCSSCH
T ss_pred HHHHHHhcCCCEEEEcChhH------------------------------hCCHHHHhhccCCEEEEccCcCcCCCCcCH
Confidence 888886 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHhhc
Q 021895 276 AKQVGCFTFCL 286 (306)
Q Consensus 276 ~~~A~~~~~~l 286 (306)
++||+...-..
T Consensus 143 i~~Ai~~G~~~ 153 (229)
T 3auf_A 143 QRQALEHGVKV 153 (229)
T ss_dssp HHHHHHHTCSE
T ss_pred HHHHHHcCCCe
Confidence 99996655443
No 15
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=99.96 E-value=8.7e-29 Score=222.14 Aligned_cols=124 Identities=30% Similarity=0.447 Sum_probs=110.2
Q ss_pred ceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC-CCCh---HHHHHHHhc-
Q 021895 129 YKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK-ENER---EEELLELVQ- 203 (306)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k-~~~~---e~e~~~~v~- 203 (306)
+||+||+||+|+|++++|+++.++.++++|++||||++ ++.++++|+++|||+++++.+ .+.+ ++++.+.++
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~---~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 78 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNP---KAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKK 78 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCT---TCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCC---ChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHh
Confidence 69999999999999999999999888899999999984 468999999999999987743 2333 467788886
Q ss_pred -CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHHH
Q 021895 204 -NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGCF 282 (306)
Q Consensus 204 -~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~~ 282 (306)
++|++|+||||+ ||+++|++.|+.++|||||||||+|||++|++||+..
T Consensus 79 ~~~Dliv~a~y~~------------------------------il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~~ 128 (216)
T 2ywr_A 79 KGVELVVLAGFMR------------------------------ILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEF 128 (216)
T ss_dssp TTCCEEEESSCCS------------------------------CCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHH
T ss_pred cCCCEEEEeCchh------------------------------hCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHHc
Confidence 899999999999 9999999999999999999999999999999999665
Q ss_pred Hhh
Q 021895 283 TFC 285 (306)
Q Consensus 283 ~~~ 285 (306)
.-.
T Consensus 129 G~~ 131 (216)
T 2ywr_A 129 GVK 131 (216)
T ss_dssp TCS
T ss_pred CCC
Confidence 543
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=99.91 E-value=7.4e-25 Score=206.69 Aligned_cols=118 Identities=25% Similarity=0.351 Sum_probs=100.8
Q ss_pred CCceEEEEEeCC--cchHHHHHHhhhcCCCCeEEEEEeeCCCCCC-------ChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 021895 127 PKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (306)
Q Consensus 127 ~~~riavl~S~~--g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~-------~~~~~~~A~~~gIp~~~~~~k~~~~e~e 197 (306)
+++||+||+|++ .+||++|++. | ++|++|||++|++. .++++++|+++|||++.... . ++++
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~---~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~-~--~~~~ 72 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---G---HNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVS-L--RPQE 72 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---T---CEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSC-S--CSHH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---C---CcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCC-C--CCHH
Confidence 468999999998 6999999974 3 79999999987632 37899999999999976431 1 2456
Q ss_pred HHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcH
Q 021895 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (306)
Q Consensus 198 ~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p 275 (306)
+.+.++ ++|++|+|+||+ ||++++++.|+.++||+||||||+|||++|
T Consensus 73 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~p 122 (314)
T 1fmt_A 73 NQQLVAELQADVMVVVAYGL------------------------------ILPKAVLEMPRLGCINVHGSLLPRWRGAAP 122 (314)
T ss_dssp HHHHHHHTTCSEEEEESCCS------------------------------CCCHHHHHSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeeccc------------------------------cCCHHHHhhccCCEEEEcCCcCcCCCCcCH
Confidence 667775 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 021895 276 AKQVGCFT 283 (306)
Q Consensus 276 ~~~A~~~~ 283 (306)
++||+...
T Consensus 123 i~~Ai~~G 130 (314)
T 1fmt_A 123 IQRSLWAG 130 (314)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 99996544
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=99.91 E-value=9.7e-25 Score=204.96 Aligned_cols=116 Identities=21% Similarity=0.276 Sum_probs=98.8
Q ss_pred ceEEEEEeCC--cchHHHHHHhhhcCCCCeEEEEEeeCCCCCC----ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh
Q 021895 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (306)
Q Consensus 129 ~riavl~S~~--g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~----~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v 202 (306)
+||+||+|++ .+||++|+++ +++|++||||+|++. .++++++|+++|||+++.... +++++.+.+
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~------~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~---~~~~~~~~l 71 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV---NHPLWVERI 71 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCC---CSHHHHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC------CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcC---CcHHHHHHH
Confidence 5999999998 6999999975 479999999997631 267999999999999986632 234566666
Q ss_pred c--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHH
Q 021895 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVG 280 (306)
Q Consensus 203 ~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~ 280 (306)
+ ++|++|+|+||+ ||++++++.|+.++||+||||||+|||++|++||+
T Consensus 72 ~~~~~Dliv~~~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~ai 121 (305)
T 2bln_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (305)
T ss_dssp HHTCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHH
T ss_pred HhcCCCEEEEecccc------------------------------ccCHHHHhcCcCCEEEecCCcCcCCCCccHHHHHH
Confidence 5 999999999999 99999999999999999999999999999999995
Q ss_pred HHH
Q 021895 281 CFT 283 (306)
Q Consensus 281 ~~~ 283 (306)
...
T Consensus 122 ~~G 124 (305)
T 2bln_A 122 VNG 124 (305)
T ss_dssp HTT
T ss_pred HcC
Confidence 543
No 18
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=99.89 E-value=1.8e-23 Score=209.56 Aligned_cols=118 Identities=20% Similarity=0.259 Sum_probs=100.3
Q ss_pred ceEEEEEeCC--cchHHHHHHhhhcCCCCeEEEEEeeCCCCCC----ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh
Q 021895 129 YKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGP----NSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (306)
Q Consensus 129 ~riavl~S~~--g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~----~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v 202 (306)
+||+||+|++ ++||++|+++ +++|++||||+|+.. .++++++|+++|||++++... +++++++.+
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~---~~~~~~~~l 71 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV---NHPLWVERI 71 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC--------CCHHHHHHHHTCCEECCSCT---TSHHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCCC---CcHHHHHHH
Confidence 5999999998 7999999986 489999999997631 257999999999999886633 234566666
Q ss_pred c--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHH
Q 021895 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVG 280 (306)
Q Consensus 203 ~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~ 280 (306)
+ ++|++|+|+||+ ||+++|++.|+.++|||||||||+|||++|++||+
T Consensus 72 ~~~~~d~iv~~~~~~------------------------------il~~~~l~~~~~~~iNiH~slLP~~rG~~p~~~ai 121 (660)
T 1z7e_A 72 AQLSPDVIFSFYYRH------------------------------LIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVL 121 (660)
T ss_dssp HHHCCSEEEEESCCS------------------------------CCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHH
T ss_pred HhcCCCEEEEcCccc------------------------------ccCHHHHhcCCCCeEEecCCcCCCCCCccHHHHHH
Confidence 5 999999999999 99999999999999999999999999999999996
Q ss_pred HHHhh
Q 021895 281 CFTFC 285 (306)
Q Consensus 281 ~~~~~ 285 (306)
...-.
T Consensus 122 ~~g~~ 126 (660)
T 1z7e_A 122 VNGET 126 (660)
T ss_dssp HTTCS
T ss_pred HcCCC
Confidence 55443
No 19
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=99.89 E-value=3.3e-23 Score=196.06 Aligned_cols=119 Identities=20% Similarity=0.281 Sum_probs=99.2
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC-------ChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEE 197 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~-------~~~~~~~A~~~gIp~~~~~~k~~~~e~e 197 (306)
+++||+|++|++. +||++|+++ .++|++|||++|++. .+++.++|+++|||++... + -++++
T Consensus 6 ~~mrivf~Gt~~fa~~~L~~L~~~------~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~-~--~~~~~ 76 (318)
T 3q0i_A 6 QSLRIVFAGTPDFAARHLAALLSS------EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPE-N--FKSDE 76 (318)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTS------SSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCS-C--SCSHH
T ss_pred cCCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccC-c--CCCHH
Confidence 3689999999974 899999864 379999999988632 4689999999999997643 1 12346
Q ss_pred HHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcH
Q 021895 198 LLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKP 275 (306)
Q Consensus 198 ~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p 275 (306)
+.+.++ ++|++|+|+||+ ||++++++.|+.++||+||||||+|||++|
T Consensus 77 ~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~p 126 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVAYGL------------------------------LLPKVVLDTPKLGCINVHGSILPRWRGAAP 126 (318)
T ss_dssp HHHHHHTTCCSEEEESSCCS------------------------------CCCHHHHTSSTTCEEEEESSSTTTTBSSCH
T ss_pred HHHHHHhcCCCEEEEeCccc------------------------------cCCHHHHhhCcCCEEEeCCccCcCCCCcCH
Confidence 777776 899999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 021895 276 AKQVGCFTF 284 (306)
Q Consensus 276 ~~~A~~~~~ 284 (306)
++||+...-
T Consensus 127 i~~Ai~~G~ 135 (318)
T 3q0i_A 127 IQRSIWAGD 135 (318)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 999965433
No 20
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=99.88 E-value=1.6e-22 Score=191.29 Aligned_cols=118 Identities=25% Similarity=0.352 Sum_probs=99.2
Q ss_pred CCCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC-------CChhHHHHHHhCCCCEEEeCCCCCChHH
Q 021895 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-------PNSHVIRFLERHGIPYHYLCAKENEREE 196 (306)
Q Consensus 126 ~~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~-------~~~~~~~~A~~~gIp~~~~~~k~~~~e~ 196 (306)
..++||+|++|++. .||++|++. .++|++|||++|+. ..+++.++|+++|||++... +.+ ++
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~-~~~--~~ 72 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED------GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPL-RIR--EK 72 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT------TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCS-CTT--SH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC------CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccc-cCC--CH
Confidence 35789999999986 799999874 37999999999873 14789999999999988643 222 23
Q ss_pred HHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCc
Q 021895 197 ELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGK 274 (306)
Q Consensus 197 e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~ 274 (306)
+.++.++ ++|++|+++||+ ||++++++.|+.++||+||||||+|||++
T Consensus 73 ~~~~~l~~~~~Dliv~~~y~~------------------------------ilp~~~l~~~~~g~iNiHpSlLP~yRG~~ 122 (317)
T 3rfo_A 73 DEYEKVLALEPDLIVTAAFGQ------------------------------IVPNEILEAPKYGCINVHASLLPELRGGA 122 (317)
T ss_dssp HHHHHHHHHCCSEEEESSCCS------------------------------CCCHHHHHSSTTCEEEEESSCTTSSBSSC
T ss_pred HHHHHHHhcCCCEEEEcCchh------------------------------hCCHHHHhhCcCCEEEECCccCcCCCCcC
Confidence 3455554 999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHH
Q 021895 275 PAKQVGCF 282 (306)
Q Consensus 275 p~~~A~~~ 282 (306)
|++||+..
T Consensus 123 pi~~Ai~~ 130 (317)
T 3rfo_A 123 PIHYAIME 130 (317)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999554
No 21
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=99.88 E-value=2.1e-22 Score=190.04 Aligned_cols=117 Identities=24% Similarity=0.329 Sum_probs=98.2
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC-------ChhHHHHHHhCCCCEEEeCCCCCChHHHH
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-------NSHVIRFLERHGIPYHYLCAKENEREEEL 198 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~-------~~~~~~~A~~~gIp~~~~~~k~~~~e~e~ 198 (306)
++||+|++|.+. .||++|+++ .++|++|+|++|++. .+++.++|+++|||++.... -+++++
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~---~~~~~~ 72 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS------SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFS---LRDEVE 72 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS------SSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSC---SSSHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECccc---CCCHHH
Confidence 579999999986 689998864 379999999988742 47899999999999876432 123466
Q ss_pred HHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHH
Q 021895 199 LELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPA 276 (306)
Q Consensus 199 ~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~ 276 (306)
.+.++ ++|++|+++||+ ||++++++.|+.++||+||||||+|||++|+
T Consensus 73 ~~~l~~~~~Dliv~~~~~~------------------------------ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi 122 (314)
T 3tqq_A 73 QEKLIAMNADVMVVVAYGL------------------------------ILPKKALNAFRLGCVNVHASLLPRWRGAAPI 122 (314)
T ss_dssp HHHHHTTCCSEEEEESCCS------------------------------CCCHHHHTSSTTCEEEEESSCTTTTBSSCHH
T ss_pred HHHHHhcCCCEEEEcCccc------------------------------ccCHHHHhhCcCCEEEecCccccCCCCccHH
Confidence 67775 899999999999 9999999999999999999999999999999
Q ss_pred HHHHHHH
Q 021895 277 KQVGCFT 283 (306)
Q Consensus 277 ~~A~~~~ 283 (306)
+||+...
T Consensus 123 ~~Ai~~G 129 (314)
T 3tqq_A 123 QRAILAG 129 (314)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9996543
No 22
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=99.87 E-value=1.9e-22 Score=191.36 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=97.1
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC-CChhHHHHHHhCCCCEEEeCCCC--CChHHHHHHHh
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKE--NEREEELLELV 202 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~~~~~~~A~~~gIp~~~~~~k~--~~~e~e~~~~v 202 (306)
++||+||++.+. .+|++|++ . .++|++|||.+|+. ..+++.++|+++|||++++.... ...++++++.+
T Consensus 22 ~mrIvf~G~~~fa~~~L~~L~~----~--~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~l 95 (329)
T 2bw0_A 22 SMKIAVIGQSLFGQEVYCHLRK----E--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKY 95 (329)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH----T--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHH----C--CCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHHH
Confidence 479999976542 34555443 3 37999999988762 23688999999999999986321 12236677777
Q ss_pred c--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHH
Q 021895 203 Q--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVG 280 (306)
Q Consensus 203 ~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~ 280 (306)
+ ++|++|+|+||+ ||++++++.|+.++||+||||||+|||++|++||+
T Consensus 96 ~~~~~Dliv~a~y~~------------------------------ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai 145 (329)
T 2bw0_A 96 QALGAELNVLPFCSQ------------------------------FIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTL 145 (329)
T ss_dssp HTTCCSEEEESSCSS------------------------------CCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHH
T ss_pred HhcCCCEEEEeehhh------------------------------hCCHHHHhhCcCCEEEEcCCcCcCCCCcCHHHHHH
Confidence 6 899999999999 99999999999999999999999999999999996
Q ss_pred HHHhh
Q 021895 281 CFTFC 285 (306)
Q Consensus 281 ~~~~~ 285 (306)
...-.
T Consensus 146 ~~G~~ 150 (329)
T 2bw0_A 146 IHGDK 150 (329)
T ss_dssp HTTCS
T ss_pred HcCCC
Confidence 55433
No 23
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.79 E-value=7.7e-19 Score=166.67 Aligned_cols=161 Identities=10% Similarity=0.059 Sum_probs=115.9
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccc
Q 021895 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (306)
Q Consensus 38 p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~ 117 (306)
+...+++||++|||||||||+||++|+++||||+|++|++. +|+|+||++|+.++...+.++|+++|+.++++++|.|
T Consensus 8 ~~~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~--~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 8 PPKVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI--RHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp -CCEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE--TTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred CCCCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE--CCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCeEE
Confidence 34568999999999999999999999999999999999975 7999999999987643356999999999999999754
Q ss_pred ceeeecCCCC-------CceEEEEEeCC--cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 118 SVVRVPDIDP-------KYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 118 ~~~rl~~~~~-------~~riavl~S~~--g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
++.+.++ ..-+..+.+.. ++++.++...+.+..++++-...+++.+ ..++++++.-
T Consensus 86 ---~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~------------~~~~~~~v~~ 150 (415)
T 3p96_A 86 ---SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYP------------VIGLELRVSV 150 (415)
T ss_dssp ---EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSS------------SEEEEEEEEC
T ss_pred ---EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCC------------ceEEEEEeeC
Confidence 3443222 12244444444 6788888887777666655555566431 2356666533
Q ss_pred CCCCCh--HHHHHHHhc--CCcEEEEeccCC
Q 021895 189 AKENER--EEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 189 ~k~~~~--e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
.+.+.. ++++.++.+ +.|++|+..-|.
T Consensus 151 ~~~~~~~l~~~l~~l~~~~~vD~~v~~~~~~ 181 (415)
T 3p96_A 151 PPGADEALRTALNRVSSEEHVDVAVEDYTLE 181 (415)
T ss_dssp CTTCHHHHHHHHHHHHHHHTCEEEEEECSTT
T ss_pred CCCCHHHHHHHHHHHhhhcCcCccccccccc
Confidence 333222 256666665 899999987544
No 24
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=99.58 E-value=1.5e-14 Score=110.36 Aligned_cols=75 Identities=24% Similarity=0.156 Sum_probs=68.3
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccc
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~ 117 (306)
.++++|++.|+||||++++||++|+++|+||++++++.. .|.|+|++++++++ ....++|.++|.++++++++.+
T Consensus 3 ~~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~--~~~~~~~i~v~~~~-~~~l~~l~~~L~~~~~~~~~~~ 77 (91)
T 1zpv_A 3 AMKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL--DEYFTMMAVVSSDE-KQDFTYLRNEFEAFGQTLNVKI 77 (91)
T ss_dssp CEEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESS-CCCHHHHHHHHHHHHHHHTEEE
T ss_pred CceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE--cCEEEEEEEEEeCC-CCCHHHHHHHHHHHHHHcCCEE
Confidence 467999999999999999999999999999999999865 48999999999986 4689999999999999999654
No 25
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.57 E-value=3.6e-15 Score=130.58 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=70.7
Q ss_pred CCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC----CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE----KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 37 ~p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~----l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
.....+++|||+|+|||||||+||++|+++|+||++++|+++. ..+.|+|+++++.++ ..+ ++|+++|.+++++
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~-~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPF-PLY-QEVVTALSRVEEE 165 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEG-GGH-HHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCC-Ccc-HHHHHHHHHHHHH
Confidence 5567889999999999999999999999999999999999764 568999999999874 456 9999999999999
Q ss_pred hhccc
Q 021895 113 FNAMR 117 (306)
Q Consensus 113 lgl~~ 117 (306)
+||.|
T Consensus 166 l~~di 170 (195)
T 2nyi_A 166 FGVDI 170 (195)
T ss_dssp HTCEE
T ss_pred cCeEE
Confidence 99743
No 26
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.55 E-value=3.2e-14 Score=123.04 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=65.8
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccc
Q 021895 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (306)
Q Consensus 41 ~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~ 117 (306)
.+++|||+|+|||||||+||++|+++||||++++|+.. .|.|+|+++|+.+. ...++|+++|.++++++++.+
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~~~--~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISGSP--SNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEecCC--CCHHHHHHHHHHHHHhcCCEE
Confidence 36999999999999999999999999999999999874 79999999998764 368999999999999998654
No 27
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.52 E-value=4.5e-14 Score=123.62 Aligned_cols=74 Identities=11% Similarity=0.054 Sum_probs=65.7
Q ss_pred CcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCC----HHHHHHHHHHHHhhhh
Q 021895 39 TLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWP----REQMDEDFFKLSKMFN 114 (306)
Q Consensus 39 ~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~----~eeLreaL~~la~elg 114 (306)
++++++|||+|||||||||+||++|+++||||+|++|++. .|.|+|+++|+.++. + .++|+++|.+++++++
T Consensus 2 ~~~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~--~~~f~m~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~ 77 (195)
T 2nyi_A 2 ETQSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL--GGDFAMIVLVSLNAK--DGKLIQSALESALPGFQISTR 77 (195)
T ss_dssp CCEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEESSS--SSHHHHHHHHHHSTTCEEEEE
T ss_pred CceEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE--CCeEEEEEEEEecCc--cchhHHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999999999975 799999999987642 4 7899999999888888
Q ss_pred cc
Q 021895 115 AM 116 (306)
Q Consensus 115 l~ 116 (306)
+.
T Consensus 78 ~~ 79 (195)
T 2nyi_A 78 RA 79 (195)
T ss_dssp EC
T ss_pred Ce
Confidence 54
No 28
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.46 E-value=2.9e-13 Score=117.03 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=70.7
Q ss_pred CCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC------CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHH
Q 021895 37 SPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE------KKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (306)
Q Consensus 37 ~p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~------l~G~FfMrmeVdv~~~~~~~eeLreaL~~la 110 (306)
.++...++|++.|+||+|||++|+++|+++|+||.+++++++. ..+.|+|+++++.++ ..+.++|+++|.+++
T Consensus 88 ~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~-~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 88 QTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDS-GCNLMQLQEEFDALC 166 (192)
T ss_dssp CCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred ccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCC-CCCHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999999764 578999999999875 668999999999999
Q ss_pred hhhhccc
Q 021895 111 KMFNAMR 117 (306)
Q Consensus 111 ~elgl~~ 117 (306)
+++++.|
T Consensus 167 ~~~~~~~ 173 (192)
T 1u8s_A 167 TALDVQG 173 (192)
T ss_dssp HHHTCEE
T ss_pred HHhCceE
Confidence 9999743
No 29
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.29 E-value=1.4e-12 Score=120.94 Aligned_cols=50 Identities=16% Similarity=0.360 Sum_probs=45.7
Q ss_pred CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCCcHHHHHHHHH
Q 021895 204 NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQVGCFT 283 (306)
Q Consensus 204 ~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga~p~~~A~~~~ 283 (306)
++|++|+|+||+ ||++++++.| ++||+||||||+|||++|++||+...
T Consensus 77 ~pDliv~~~y~~------------------------------ilp~~il~~~--g~iNiHpSLLP~yRG~~pi~~Ai~~G 124 (260)
T 1zgh_A 77 NPEYILFPHWSW------------------------------IIPKEIFENF--TCVVFHMTDLPFGRGGSPLQNLIERG 124 (260)
T ss_dssp CCSEEEESSCCS------------------------------CCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTT
T ss_pred CCCEEEEecccc------------------------------ccCHHHHccC--CEEEEeCCcCCCCCCcCHHHHHHHcC
Confidence 999999999999 9999999985 59999999999999999999996554
Q ss_pred hh
Q 021895 284 FC 285 (306)
Q Consensus 284 ~~ 285 (306)
-.
T Consensus 125 ~~ 126 (260)
T 1zgh_A 125 IK 126 (260)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 30
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.40 E-value=1.4e-06 Score=64.89 Aligned_cols=65 Identities=12% Similarity=0.071 Sum_probs=50.5
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHH
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la 110 (306)
..++.|++.++||||++++|++.|+++|+||.++++... .+.+.+.+.++.++ .+++.+.++++.
T Consensus 3 ~~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~--~~~~~~~i~v~~~~----~~~l~~l~~~L~ 67 (88)
T 2ko1_A 3 DFLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK--DGIFTCNLMIFVKN----TDKLTTLMDKLR 67 (88)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC--SSEEEEEEEEEESS----HHHHHHHHHHHT
T ss_pred cEEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc--CCEEEEEEEEEECC----HHHHHHHHHHHh
Confidence 456789999999999999999999999999999999653 34666777777653 455555555544
No 31
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=98.03 E-value=1.4e-05 Score=72.88 Aligned_cols=138 Identities=20% Similarity=0.214 Sum_probs=83.5
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCC---CCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccc
Q 021895 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEK---KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (306)
Q Consensus 41 ~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l---~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~ 117 (306)
|..-|.+.+.||+|+.+.|++.|+++++||..++|....- +|...|. +++++. .++++-+.|+++-.=+.+
T Consensus 3 ~~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~--IEV~d~--~Le~LL~kLrkI~gV~~V-- 76 (223)
T 1y7p_A 3 MLRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIY--FEIEGG--DFEKILERVKTFDYIIEI-- 76 (223)
T ss_dssp -CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEE--EEECSS--CHHHHHHHHHTCTTEEEE--
T ss_pred ceEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEE--EEECCC--CHHHHHHHHhCCCCeeEE--
Confidence 5677899999999999999999999999999999987531 3567777 555542 667777777654322221
Q ss_pred ceeeecCCCC--CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCC-----CCEEEeCCC
Q 021895 118 SVVRVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG-----IPYHYLCAK 190 (306)
Q Consensus 118 ~~~rl~~~~~--~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~g-----Ip~~~~~~k 190 (306)
.+....++ -+||.+++.|.- .-|-.+ .++.-|.+|+ |.+..++.-
T Consensus 77 --~Rv~~~~~i~gkrvii~gggaq-v~qva~-------------------------gai~eadrhnirgerisvdt~p~v 128 (223)
T 1y7p_A 77 --EEEESFERVFGKRVIILGGGAL-VSQVAI-------------------------GAISEADRHNLRGERISVDTMPVV 128 (223)
T ss_dssp --EEECCHHHHTCEEEEEEECHHH-HHHHHH-------------------------HHHHHHHHHHHTSCCEEEEEEECC
T ss_pred --EEEcchhhhcCcEEEEECCcHH-HHHHHH-------------------------hhcchhhhcccccceeeeecceec
Confidence 12211111 257777776531 111111 1345566776 445555533
Q ss_pred CCChHHHHHHHhc------CCcEEEEeccCC
Q 021895 191 ENEREEELLELVQ------NTDFLVLARYMQ 215 (306)
Q Consensus 191 ~~~~e~e~~~~v~------~~D~vVlA~ym~ 215 (306)
+ |+++.+.+. ++.++||||-+-
T Consensus 129 g---e~~l~~av~av~~lpr~~~lvlags~m 156 (223)
T 1y7p_A 129 G---EEEIAEAVKAVSRLHRAEVLVLAGGIM 156 (223)
T ss_dssp S---HHHHHHHHHHGGGSTTEEEEEEESSBC
T ss_pred C---HHHHHHHHHHHhhccccceeeEecccc
Confidence 2 556665553 899999999866
No 32
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.75 E-value=0.00022 Score=67.36 Aligned_cols=91 Identities=11% Similarity=-0.026 Sum_probs=68.8
Q ss_pred CcccEEEEEEcCC-ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccc
Q 021895 39 TLTHGIHVFHCPD-EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (306)
Q Consensus 39 ~~~k~ILTViGpD-RpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~ 117 (306)
...++++++.|.| ++|++++|+.+++++|.||.++..... ...|.+-+.+.+++ .+.+++++++.++++++++..
T Consensus 98 ~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~--~~~~~~~~~v~~~~--~~~~~l~~~l~~l~~~~~vD~ 173 (415)
T 3p96_A 98 EPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD--YPVIGLELRVSVPP--GADEALRTALNRVSSEEHVDV 173 (415)
T ss_dssp CCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES--SSSEEEEEEEECCT--TCHHHHHHHHHHHHHHHTCEE
T ss_pred CCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC--CCceEEEEEeeCCC--CCHHHHHHHHHHHhhhcCcCc
Confidence 3568999999999 999999999999999999999988642 34455555566554 578999999999999998654
Q ss_pred ceeeecC-CCCCceEEEE
Q 021895 118 SVVRVPD-IDPKYKVAVL 134 (306)
Q Consensus 118 ~~~rl~~-~~~~~riavl 134 (306)
. +.-.. ..+++|.++|
T Consensus 174 ~-v~~~~~~~~~~k~viF 190 (415)
T 3p96_A 174 A-VEDYTLERRAKRLIVF 190 (415)
T ss_dssp E-EEECSTTTTCCCEEEE
T ss_pred c-cccccccccCCcEEEE
Confidence 3 22222 2455676665
No 33
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.63 E-value=7.4e-05 Score=64.86 Aligned_cols=52 Identities=15% Similarity=0.179 Sum_probs=44.1
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEE
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFI 91 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVd 91 (306)
+|++.|++...|+||+.++|++.++++|+||..++.....+.|...|.+.++
T Consensus 1 ~~~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~ 52 (164)
T 2f1f_A 1 MARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV 52 (164)
T ss_dssp -CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE
T ss_pred CeEEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe
Confidence 4689999999999999999999999999999998886544457777777776
No 34
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=97.51 E-value=0.0015 Score=53.39 Aligned_cols=98 Identities=9% Similarity=0.013 Sum_probs=62.3
Q ss_pred CCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccc
Q 021895 38 PTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMR 117 (306)
Q Consensus 38 p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~ 117 (306)
-+||...|++.-+|+||+.++|++.|+++|+||..+.|....+.|. .|+.+ . +.+..++.|++. |...
T Consensus 2 ~~m~~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~--~~~~~--~----d~~~a~~~L~~~----G~~v 69 (144)
T 2f06_A 2 NAMVAKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGI--LRGIV--S----DPDKAYKALKDN----HFAV 69 (144)
T ss_dssp CSSEEEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEE--EEEEE--S----CHHHHHHHHHHT----TCCE
T ss_pred CccEEEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCE--EEEEe--C----CHHHHHHHHHHc----CCeE
Confidence 3568899999999999999999999999999999998864322232 34432 2 456777777643 3211
Q ss_pred ceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCC
Q 021895 118 SVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLP 155 (306)
Q Consensus 118 ~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~ 155 (306)
.+ ...|++-.......+..++..+.+..++
T Consensus 70 -~~-------~svv~v~~~d~pGvla~i~~~L~~~~In 99 (144)
T 2f06_A 70 -NI-------TDVVGISCPNVPGALAKVLGFLSAEGVF 99 (144)
T ss_dssp -EE-------EEEEEEEEESSTTHHHHHHHHHHHTTCC
T ss_pred -ee-------eeEEEEEeCCCCcHHHHHHHHHHHCCCC
Confidence 01 1234444444434566666665555443
No 35
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.39 E-value=0.001 Score=56.37 Aligned_cols=110 Identities=11% Similarity=-0.027 Sum_probs=71.3
Q ss_pred CCCcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc
Q 021895 37 SPTLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (306)
Q Consensus 37 ~p~~~k~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl 115 (306)
+-...-..|++.| +|++|+.++|.+.|+++|+||..+.|.... +|.+.+++.++- .+.++..+.|+++.++++.
T Consensus 20 a~~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~-~g~~~isf~v~~----~~~~~a~~~l~~~~~~l~~ 94 (167)
T 2re1_A 20 AFDKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPR----GDYKQTLEILSERQDSIGA 94 (167)
T ss_dssp EEECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECG----GGHHHHHHHHHHSSTTTTC
T ss_pred EecCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCC-CCeeEEEEEEec----hHHHHHHHHHHHHHHHcCC
Confidence 3344557889997 999999999999999999999999986433 366776776653 2456667778777666663
Q ss_pred ccceeeecCCCCCceEEEEEeC---CcchHHHHHHhhhcCCCC
Q 021895 116 MRSVVRVPDIDPKYKVAVLASK---QEHCLVDFLYGWQEGKLP 155 (306)
Q Consensus 116 ~~~~~rl~~~~~~~riavl~S~---~g~~L~~ll~~~~~g~l~ 155 (306)
.. +.-.+.-.+|.|.+.+ ...-+..++..+.+-.++
T Consensus 95 ~~----i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~In 133 (167)
T 2re1_A 95 AS----IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGIN 133 (167)
T ss_dssp SE----EEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCC
T ss_pred ce----EEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCc
Confidence 11 1222345577777776 222345555555444333
No 36
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.30 E-value=0.00034 Score=60.81 Aligned_cols=67 Identities=18% Similarity=0.095 Sum_probs=50.5
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHH
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~ 108 (306)
.|++.|++...|+||..++|++.++++|+||..++.....+.|...|.+.++-+ ....+++.+.+.+
T Consensus 2 ~m~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--~~~leql~kQL~K 68 (165)
T 2pc6_A 2 HMRHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--DEIVEQITKQLNK 68 (165)
T ss_dssp CEEEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--HHHHHHHHHHHHH
T ss_pred ceEEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--HHHHHHHHHHhcC
Confidence 468999999999999999999999999999999888654445776777777632 1234445555444
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=97.18 E-value=0.00095 Score=59.66 Aligned_cols=68 Identities=21% Similarity=0.184 Sum_probs=53.2
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHH
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~l 109 (306)
.|++.|++.-.|+||..++|++.++++|+||..+......+.|.-.|.+.++-++ ...+++...+.++
T Consensus 27 ~m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e--~~ieqL~kQL~KL 94 (193)
T 2fgc_A 27 IREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDD--KTIEQIEKQAYKL 94 (193)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECT--THHHHHHHHHTTS
T ss_pred ceEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCH--HHHHHHHHHhcCc
Confidence 4789999999999999999999999999999998886444456666666676432 3467777766654
No 38
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.95 E-value=0.0074 Score=50.91 Aligned_cols=108 Identities=15% Similarity=0.025 Sum_probs=73.7
Q ss_pred CcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcc
Q 021895 39 TLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (306)
Q Consensus 39 ~~~k~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~-l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~ 116 (306)
...-..|++.| +|++|+.++|.+.|+++|+||.-+.|.... +.|...+.+.++- .+.++..+.|+++.++++.
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~----~d~~~a~~~L~~~~~~~~~- 87 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKK----DFAQEALEALEPVLAEIGG- 87 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEG----GGHHHHHHHHHHHHHHHCC-
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEeh----HHHHHHHHHHHHHHHHhCC-
Confidence 34557888988 899999999999999999999999985321 2356666666652 2456677888887777763
Q ss_pred cceeeecCCCCCceEEEEEeC---CcchHHHHHHhhhcCCCC
Q 021895 117 RSVVRVPDIDPKYKVAVLASK---QEHCLVDFLYGWQEGKLP 155 (306)
Q Consensus 117 ~~~~rl~~~~~~~riavl~S~---~g~~L~~ll~~~~~g~l~ 155 (306)
..++ .+.--+|.+.+.+ ....+..++.++.+..++
T Consensus 88 --~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~In 125 (167)
T 2dt9_A 88 --EAIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVASTGAN 125 (167)
T ss_dssp --EEEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCC
T ss_pred --cEEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCC
Confidence 2333 3456789999987 222345555555444333
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.51 E-value=0.0035 Score=51.06 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=30.9
Q ss_pred EEEEcCCccchHHHHHHHHHhcCCeEeEeeeec
Q 021895 45 HVFHCPDEVGIVAKLSECIASRGGNILAADVFV 77 (306)
Q Consensus 45 LTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~i 77 (306)
|.|.|-||+|+++.|++.|+++++||..++...
T Consensus 3 ~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 3 LEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 678999999999999999999999999999953
No 40
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.37 E-value=0.0091 Score=48.67 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=41.8
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHH
Q 021895 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (306)
Q Consensus 43 ~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~ 108 (306)
-++.+.-+|+||.+|++++.|+++|+||..+-.+. ..+.-.+.+.+ + +.+...+.|.+
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~i~~--~----d~~~A~~~L~~ 130 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVVIRP--S----NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEEEEE--S----CHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEEEEe--C----CHHHHHHHHHH
Confidence 36777789999999999999999999998876652 23444444444 2 45666666664
No 41
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.26 E-value=0.0061 Score=60.60 Aligned_cols=65 Identities=17% Similarity=0.116 Sum_probs=50.1
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHH
Q 021895 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKL 109 (306)
Q Consensus 41 ~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~l 109 (306)
..+.|.+.-+|+||+|+.|++.|.++|+||.+++-.-...+|.-.|++++|-+ .+ +++.+.+.++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~---~~-~~~l~~l~~~ 517 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD---VP-DDVRTAIAAA 517 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC---CC-HHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC---CC-HHHHHHHhcC
Confidence 45677788899999999999999999999999877655556778888888743 23 4555556543
No 42
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.22 E-value=0.015 Score=56.38 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=51.5
Q ss_pred hhhhheeecc--cccccCCCCCcccCCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEE
Q 021895 11 LQQVVKFTNR--SFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRS 88 (306)
Q Consensus 11 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrm 88 (306)
.+++..|.+. .-..+.||.-.+. +.....|.+.-.|+||+|++|++.|+++|+||....-.. .++.-.|++
T Consensus 303 ~~nl~~~l~g~~~~~~vn~p~~~~~-----~~~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vi 375 (404)
T 1sc6_A 303 AGKLIKYSDNGSTLSAVNFPEVSLP-----LHGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVI 375 (404)
T ss_dssp HHHHHHHHHHCCCTTBSSSCCCCCC-----CCSSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEE
T ss_pred HHHHHHHHcCCCCcceecccccccC-----cCCcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEE
Confidence 3455555432 2334566653322 113456778889999999999999999999999977653 456777778
Q ss_pred EEEe
Q 021895 89 EFIF 92 (306)
Q Consensus 89 eVdv 92 (306)
++|-
T Consensus 376 dvD~ 379 (404)
T 1sc6_A 376 DIEA 379 (404)
T ss_dssp EEEC
T ss_pred EcCC
Confidence 7773
No 43
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.69 E-value=0.015 Score=51.67 Aligned_cols=112 Identities=15% Similarity=0.017 Sum_probs=73.5
Q ss_pred CCCCCCcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 34 SSVSPTLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 34 ~~~~p~~~k~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
+.++-..+-+.||+.| ||+||+.|+|=+.|+++|+||.=+.|...... .....+.|.++. .+.+...+.++++..+
T Consensus 27 tGIa~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~-~~~~~~sftv~~--~d~~~~~~~l~~~~~~ 103 (200)
T 4go7_X 27 TGVAHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVE-DGKTDITFTCSR--DVGPAAVEKLDSLRNE 103 (200)
T ss_dssp EEEEEECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC---CCEEEEEEEEEG--GGHHHHHHHHHTTHHH
T ss_pred EEEEccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeecccccc-ccceEEEEecch--hhHHHHHHHHHHHHhh
Confidence 3344455567788876 99999999999999999999999998653222 223355566654 2567777888888777
Q ss_pred hhcccceeeecCCCCCceEEEEEeCCcc---hHHHHHHhhhcC
Q 021895 113 FNAMRSVVRVPDIDPKYKVAVLASKQEH---CLVDFLYGWQEG 152 (306)
Q Consensus 113 lgl~~~~~rl~~~~~~~riavl~S~~g~---~L~~ll~~~~~g 152 (306)
++... +.-.+.--||.+.+.|=-. -...+..++.+.
T Consensus 104 ~~~~~----v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~ 142 (200)
T 4go7_X 104 IGFSQ----LLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAV 142 (200)
T ss_dssp HCCSE----EEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHT
T ss_pred hceee----EEEecCeeeeeeeccccccCCCcHHHHHHHHHHC
Confidence 76321 2223345689999988531 233444554444
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.13 E-value=0.12 Score=44.56 Aligned_cols=104 Identities=14% Similarity=-0.021 Sum_probs=67.9
Q ss_pred ccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccc
Q 021895 41 THGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (306)
Q Consensus 41 ~k~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~-l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~ 118 (306)
+-..||+.| +|++|+.++|-+.|+++|+||.-+.|.... +.|.-.+.+.++ . .+.+...+.|+++.++++..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~--~--~~~~~a~~~L~~~~~el~~~-- 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS--R--DVGPAAVEKLDSLRNEIGFS-- 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEE--T--TTHHHHHHHHHHTHHHHCCS--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEe--h--hHHHHHHHHHHHHHHhcCcc--
Confidence 345566654 799999999999999999999999886542 145545555554 2 25667777888877777532
Q ss_pred eeeecCCCCCceEEEEEeCCc---chHHHHHHhhhcC
Q 021895 119 VVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEG 152 (306)
Q Consensus 119 ~~rl~~~~~~~riavl~S~~g---~~L~~ll~~~~~g 152 (306)
.+++ .+.--+|++.+.+=- ..+..++.++.+.
T Consensus 89 ~v~~--~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~ 123 (181)
T 3s1t_A 89 QLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAV 123 (181)
T ss_dssp EEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred eEEE--eCCEEEEEEEecccccCchHHHHHHHHHHHC
Confidence 1222 335568999888642 2334455555444
No 45
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.52 E-value=0.023 Score=54.27 Aligned_cols=71 Identities=15% Similarity=0.297 Sum_probs=43.8
Q ss_pred CCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 124 ~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
...+|.||+|.++|-|.. -+.++.+-.-.+++++|++.. .....++|+++|||++. + .| +++.
T Consensus 3 ~~~~~~rv~VvG~G~g~~---h~~a~~~~~~~~elvav~~~~----~~~a~~~a~~~gv~~~~-~-----~~----~l~~ 65 (372)
T 4gmf_A 3 SASPKQRVLIVGAKFGEM---YLNAFMQPPEGLELVGLLAQG----SARSRELAHAFGIPLYT-S-----PE----QITG 65 (372)
T ss_dssp ----CEEEEEECSTTTHH---HHHTTSSCCTTEEEEEEECCS----SHHHHHHHHHTTCCEES-S-----GG----GCCS
T ss_pred CCCCCCEEEEEehHHHHH---HHHHHHhCCCCeEEEEEECCC----HHHHHHHHHHhCCCEEC-C-----HH----HHhc
Confidence 456789999999987632 233333221137999988754 24578899999999632 1 12 2334
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
++|+++++
T Consensus 66 ~~D~v~i~ 73 (372)
T 4gmf_A 66 MPDIACIV 73 (372)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEE
Confidence 78888776
No 46
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=94.44 E-value=0.13 Score=43.89 Aligned_cols=105 Identities=16% Similarity=0.015 Sum_probs=65.2
Q ss_pred ccEEEEEE-cCCccchHHHHHHHHHhcCCeEeEeeeeccC-CCC--eEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcc
Q 021895 41 THGIHVFH-CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKN--VFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAM 116 (306)
Q Consensus 41 ~k~ILTVi-GpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~-l~G--~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~ 116 (306)
+-..|++. .+|++|+.++|.+.|+++|+||.-+.|.... ..| .|. +.+..+ +.++..+.|+++.++++..
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~is--f~v~~~----d~~~a~~~l~~~~~~~~~~ 87 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDIT--FTCPRS----DGRRAMEILKKLQVQGNWT 87 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEE--EEEEHH----HHHHHHHHHHTTTTTTTCS
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEE--EEEccc----cHHHHHHHHHHHHHhcCCC
Confidence 44667774 5999999999999999999999999885321 122 233 223211 3455667777666666531
Q ss_pred cceeeecCCCCCceEEEEEeCCc---chHHHHHHhhhcCCCC
Q 021895 117 RSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP 155 (306)
Q Consensus 117 ~~~~rl~~~~~~~riavl~S~~g---~~L~~ll~~~~~g~l~ 155 (306)
. +.-.+.--+|.+.+++-. .-+..++.++.+..++
T Consensus 88 --~--v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~In 125 (178)
T 2dtj_A 88 --N--VLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 125 (178)
T ss_dssp --E--EEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred --e--EEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCC
Confidence 1 222345678899988642 2344556655554443
No 47
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=92.46 E-value=0.41 Score=40.17 Aligned_cols=62 Identities=23% Similarity=0.087 Sum_probs=45.6
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhh
Q 021895 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (306)
Q Consensus 40 ~~k~ILTViGpD---RpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elg 114 (306)
..-++++++|.+ ++|+.+++.+.|+++|+||.-++. . .. .+.+.++ .++..++++.+-++|+
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ist--s--e~--~is~vv~-------~~d~~~av~~Lh~~f~ 165 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIST--S--EI--KVSVLID-------EKYMELATRVLHKAFN 165 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEE--C--SS--EEEEEEE-------GGGHHHHHHHHHHHTT
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEc--c--cC--EEEEEEe-------HHHHHHHHHHHHHHhc
Confidence 456899999998 999999999999999999998763 1 12 2233343 2445677777777765
No 48
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=92.19 E-value=0.32 Score=47.59 Aligned_cols=62 Identities=16% Similarity=0.250 Sum_probs=44.5
Q ss_pred hhhhheee-c-ccccccCCCCCcccCCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeee
Q 021895 11 LQQVVKFT-N-RSFKSLKFPGEPIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVF 76 (306)
Q Consensus 11 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~ 76 (306)
.+++..|. + ..-.+..||.- +++.......|+++=.+.||++++|++.|+++|+||.+..-.
T Consensus 314 ~~nl~~~l~~g~~~~~Vn~p~~----~~~~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~ 377 (416)
T 3k5p_A 314 TRKLVEYSDVGSTVGAVNFPQV----QLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQ 377 (416)
T ss_dssp HHHHHHHHHHCCCTTBSSSCCC----CCCCCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhhCCCCceeeCCCc----CCCCCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc
Confidence 34555554 2 22345667653 233344567889999999999999999999999999996653
No 49
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=91.77 E-value=0.36 Score=47.51 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=48.3
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHh
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~ 111 (306)
..+|-|.+...|+||+.++|++.++++|++|..+-|......+.- ..+.+-.. .....+++++++++.+
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~-~~~v~~th--~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQ-VDIILLTH--VTLEKNVNAAIAKIEA 425 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------C-EEEEEEEC--SEEHHHHHHHHHHHTT
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCC-ceEEEEec--cCCHHHHHHHHHHHhc
Confidence 466899999999999999999999999999999999632111111 22333222 3467888988888764
No 50
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=91.51 E-value=0.28 Score=41.74 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=47.5
Q ss_pred CcccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc
Q 021895 39 TLTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (306)
Q Consensus 39 ~~~k~ILTViGp---DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl 115 (306)
...-++|+++|. |++|+.+++.+.|+++|+||.-++. . ... +.+.++ .++..++++.+-+.|.+
T Consensus 92 ~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~ist--S-e~~---Is~vV~-------~~d~~~Av~~Lh~~F~l 158 (178)
T 2dtj_A 92 DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIST--S-EIR---ISVLIR-------EDDLDAAARALHEQFQL 158 (178)
T ss_dssp ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEE--E-TTE---EEEEEE-------GGGHHHHHHHHHHHHTC
T ss_pred eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEEc--C-CCe---EEEEEe-------HHHHHHHHHHHHHHHcc
Confidence 345688999997 8999999999999999999988763 1 122 222232 35677888888888874
No 51
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=91.39 E-value=1.8 Score=41.61 Aligned_cols=105 Identities=16% Similarity=-0.024 Sum_probs=67.4
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhccccee
Q 021895 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVV 120 (306)
Q Consensus 43 ~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~-l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~ 120 (306)
..|++.| +|++|+.++|-+.|+++|+||.-+.|.... ..|...+.+.++- .+.+...+.|+++.++++.. ..
T Consensus 265 ~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~----~~~~~a~~~l~~~~~~~~~~--~v 338 (421)
T 3ab4_A 265 AKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPR----SDGRRAMEILKKLQVQGNWT--NV 338 (421)
T ss_dssp EEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEET----TTHHHHHHHHHHHHTTTTCS--EE
T ss_pred EEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEec----hhHHHHHHHHHHHHHHcCCc--eE
Confidence 4567774 899999999999999999999999883221 1355555666652 25666777888877777631 12
Q ss_pred eecCCCCCceEEEEEeCCc---chHHHHHHhhhcCCCC
Q 021895 121 RVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP 155 (306)
Q Consensus 121 rl~~~~~~~riavl~S~~g---~~L~~ll~~~~~g~l~ 155 (306)
.+ .+.--+|.|.+.+-. ..+..++.++.+..++
T Consensus 339 ~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~In 374 (421)
T 3ab4_A 339 LY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVN 374 (421)
T ss_dssp EE--ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCC
T ss_pred EE--eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCC
Confidence 22 334567888887521 2344555555444333
No 52
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=89.90 E-value=1.1 Score=37.43 Aligned_cols=63 Identities=16% Similarity=0.094 Sum_probs=45.5
Q ss_pred CcccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhh
Q 021895 39 TLTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (306)
Q Consensus 39 ~~~k~ILTViGpD---RpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elg 114 (306)
+..-++++++|.+ +||+.+++.+.|++.|+||.-++. . .. .+.+.|+ .++..++++.+-+.|.
T Consensus 92 ~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~---S--e~-~is~vv~-------~~d~~~Av~~Lh~~f~ 157 (167)
T 2dt9_A 92 RPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIAT---S--EV-RISVIIP-------AEYAEAALRAVHQAFE 157 (167)
T ss_dssp ECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEE---C--SS-EEEEEEE-------GGGHHHHHHHHHHHTC
T ss_pred eCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEc---c--CC-EEEEEEe-------HHHHHHHHHHHHHHHc
Confidence 3455789999987 999999999999999999966652 1 22 4445454 2456667776666665
No 53
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=89.79 E-value=0.88 Score=41.30 Aligned_cols=80 Identities=15% Similarity=0.134 Sum_probs=48.9
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCC---------CChhHHHHHHhCCCCEEEeCCCCC-Ch-HH
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG---------PNSHVIRFLERHGIPYHYLCAKEN-ER-EE 196 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~---------~~~~~~~~A~~~gIp~~~~~~k~~-~~-e~ 196 (306)
.+|++++.||.--...++....+.| .+|+++++..+.. .-..+...|+..|||.++++.++. +. .+
T Consensus 4 ~MKvvvl~SGGkDSs~al~~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e 80 (237)
T 3rjz_A 4 LADVAVLYSGGKDSNYALYWAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVE 80 (237)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHH
T ss_pred CCEEEEEecCcHHHHHHHHHHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHH
Confidence 3799999999753333444445556 6888876443211 123567889999999999885432 11 25
Q ss_pred HHHHHhc--CCcEEEE
Q 021895 197 ELLELVQ--NTDFLVL 210 (306)
Q Consensus 197 e~~~~v~--~~D~vVl 210 (306)
++.+.++ .+|-+|.
T Consensus 81 ~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 81 DLKRVLSGLKIQGIVA 96 (237)
T ss_dssp HHHHHHTTSCCSEEEC
T ss_pred HHHHHHHhcCCcEEEE
Confidence 6667776 4666654
No 54
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=86.91 E-value=0.62 Score=47.27 Aligned_cols=94 Identities=14% Similarity=0.055 Sum_probs=61.7
Q ss_pred CCcccEEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCC--CCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhh
Q 021895 38 PTLTHGIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEK--KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (306)
Q Consensus 38 p~~~k~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l--~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elg 114 (306)
-......||+.+ ||++|+.++|=+.|+++|+|+.=+.|..... .|.+.--+-|.++. .+.+...+.|+++.++++
T Consensus 440 ~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--~d~~~a~~~l~~~~~~~~ 517 (600)
T 3l76_A 440 LDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--GDSSQAEAILQPLIKDWL 517 (600)
T ss_dssp EECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH--HHHHHHHHHHHHHTTTST
T ss_pred eeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH--HHHHHHHHHHHHHHHhcC
Confidence 344556777766 9999999999999999999998888865421 25332233444433 245666777777776766
Q ss_pred cccceeeecCCCCCceEEEEEeC
Q 021895 115 AMRSVVRVPDIDPKYKVAVLASK 137 (306)
Q Consensus 115 l~~~~~rl~~~~~~~riavl~S~ 137 (306)
... + .-.+.--||++.+.|
T Consensus 518 ~~~--v--~~~~~~akVSiVG~G 536 (600)
T 3l76_A 518 DAA--I--VVNKAIAKVSIVGSG 536 (600)
T ss_dssp TCE--E--EEECCEEEEEEECGG
T ss_pred Cce--E--EEeCCeEEEEEECcc
Confidence 311 2 223455688888765
No 55
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=85.43 E-value=0.83 Score=38.27 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=31.2
Q ss_pred EEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeec
Q 021895 43 GIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFV 77 (306)
Q Consensus 43 ~ILTViGp---DRpGIVAaVS~~LAe~G~NIlD~sQ~i 77 (306)
..|++.|+ |-+||+|+|++.|+++|+-|--++.|.
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty~ 100 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTFD 100 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECSS
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 37888888 999999999999999999999888874
No 56
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=84.89 E-value=1.1 Score=40.77 Aligned_cols=71 Identities=11% Similarity=0.209 Sum_probs=44.5
Q ss_pred CCCceEEEEEeCCc---chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh
Q 021895 126 DPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (306)
Q Consensus 126 ~~~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v 202 (306)
..+.||+|++.|.- |.+.++ .. .+ .++|++|.+.. ...+.++|+++|+|-.+-+ . +++++-
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~-~~--~~--~~~lvav~d~~----~~~a~~~a~~~g~~~~y~d-----~-~ell~~- 84 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAI-QD--AE--NCVVTAIASRD----LTRAREMADRFSVPHAFGS-----Y-EEMLAS- 84 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHH-HH--CS--SEEEEEEECSS----HHHHHHHHHHHTCSEEESS-----H-HHHHHC-
T ss_pred cCccEEEEEcChHHHHHHHHHHH-Hh--CC--CeEEEEEECCC----HHHHHHHHHHcCCCeeeCC-----H-HHHhcC-
Confidence 45789999999862 333333 22 12 38999887643 2457889999999965521 2 233321
Q ss_pred cCCcEEEEec
Q 021895 203 QNTDFLVLAR 212 (306)
Q Consensus 203 ~~~D~vVlA~ 212 (306)
.++|+|+++-
T Consensus 85 ~~iDaV~I~t 94 (350)
T 4had_A 85 DVIDAVYIPL 94 (350)
T ss_dssp SSCSEEEECS
T ss_pred CCCCEEEEeC
Confidence 2789999974
No 57
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=83.54 E-value=19 Score=36.39 Aligned_cols=129 Identities=13% Similarity=0.088 Sum_probs=76.9
Q ss_pred EEEEEEc-CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhh-------h
Q 021895 43 GIHVFHC-PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF-------N 114 (306)
Q Consensus 43 ~ILTViG-pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~el-------g 114 (306)
..|++.+ +|++|+.++|-+.|+++|+||.-+.|... ..|.-.+-+ .++.. +.+...+.++++..++ +
T Consensus 271 ~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~-~~~~~~Isf--tv~~~--~~~~a~~~l~~~~~el~~~~~~~~ 345 (600)
T 3l76_A 271 AKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIH-DGNSNDIAF--TVVKD--LLNTAEAVTSAIAPALRSYPEADQ 345 (600)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCC-BTTEEEEEE--EECGG--GHHHHHHHHHHHGGGGSSSTTCSS
T ss_pred EEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeecc-CCCCceEEE--EEeHH--HHHHHHHHHHHHHHHhhccccccC
Confidence 4566665 79999999999999999999988888542 245444333 34432 5666777788777776 2
Q ss_pred cccceeeecCCCCCceEEEEEeCCc---chHHHHHHhhhcCCCC--------eEEEEEeeCCCCCCChhHHHHHHhCCC
Q 021895 115 AMRSVVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLP--------VEITCVISNHDRGPNSHVIRFLERHGI 182 (306)
Q Consensus 115 l~~~~~rl~~~~~~~riavl~S~~g---~~L~~ll~~~~~g~l~--------~~I~~Visn~~~~~~~~~~~~A~~~gI 182 (306)
.. .+.-.+.--+|++.+.+-. ..+..++..+.+-.++ ..|.++|...|. ...+..+-+++..
T Consensus 346 ~~----~v~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~istSe~~Is~vI~~~d~--~~Av~aLh~~f~~ 418 (600)
T 3l76_A 346 EA----EIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDA--DRAIAALSNAFGV 418 (600)
T ss_dssp SS----EEEEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEEECSSEEEEEEEGGGH--HHHHHHHHHHTTC
T ss_pred cc----eeEecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEecCCCEEEEEEcHHHH--HHHHHHHHHhhcc
Confidence 21 1222344567888877531 2344455554433322 457777776531 2233334445543
No 58
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=82.66 E-value=3 Score=38.67 Aligned_cols=74 Identities=23% Similarity=0.264 Sum_probs=43.8
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh--c
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--Q 203 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v--~ 203 (306)
++.||+|+++|. |..+...+... .+ ..++++|++.. ++..++++|+++|++... ..-+++++.. .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~-~~--~~elvav~d~~---~~~~~~~~a~~~g~~~~~------~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRN-AK--YLEMGAMVGID---AASDGLARAQRMGVTTTY------AGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-CS--SEEEEEEECSC---TTCHHHHHHHHTTCCEES------SHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhh-Cc--CeEEEEEEeCC---hhhhHHHHHHHcCCCccc------CCHHHHHhccCCC
Confidence 467999999875 23332222210 12 37888887754 334467889999987532 1223454431 3
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+|+.|-
T Consensus 71 ~iDvV~~at 79 (312)
T 1nvm_B 71 DIDFVFDAT 79 (312)
T ss_dssp GEEEEEECS
T ss_pred CCcEEEECC
Confidence 578888863
No 59
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=82.44 E-value=12 Score=35.12 Aligned_cols=58 Identities=21% Similarity=0.320 Sum_probs=37.3
Q ss_pred HHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccc-cccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
+.++++|+|..-+|-+ .--+.| + -....|+ .-.++.+.++..+.++|=.|| ||++||-
T Consensus 213 eav~~aDvvy~~~w~s-mg~~~~-~------------~~~~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg~ 271 (307)
T 2i6u_A 213 AAAAGADVLVTDTWTS-MGQEND-G------------LDRVKPFRPFQLNSRLLALADSDAIVLHC--LPAHRGD 271 (307)
T ss_dssp HHHTTCSEEEECCSSC-TTCTTS-C------------CCSSGGGGGGCBCHHHHHHSCTTCEEEEC--SCCCBTT
T ss_pred HHhcCCCEEEecceec-CCcccc-h------------HHHHHHHhhcCCCHHHHhhcCCCcEEECC--CCCCCCc
Confidence 4566899999999933 000000 0 0111122 235899999988889999998 7999984
No 60
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=82.42 E-value=10 Score=35.76 Aligned_cols=70 Identities=14% Similarity=0.162 Sum_probs=46.6
Q ss_pred cccEEEEEEcC-CccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 40 LTHGIHVFHCP-DEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 40 ~~k~ILTViGp-DRpGIVAaVS~~LAe~G~NIlD~sQ~id~-l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
.++.-|.+.=+ |+||-.+.+=+.++.+|+|...++..-.. ..+.|...++++ + ..+-+.++++|+++.+.
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e--g-~~~d~~v~~aL~~L~~~ 270 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDAD--G-HATDSRVADALAGLHRI 270 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEE--S-CTTSHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEe--C-CCCcHHHHHHHHHHHHh
Confidence 34555555555 99999999999999999999888775221 123343345554 2 23456788888877544
No 61
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=82.22 E-value=5.3 Score=37.88 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=37.0
Q ss_pred HHHhcCCcEEEEecc--CCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 199 LELVQNTDFLVLARY--MQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 199 ~~~v~~~D~vVlA~y--m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+.++++|+|..-.| |+ +|+|++-.+ ...+..-.+..+.++..+.++|=.|| ||++||-
T Consensus 229 ~eav~~aDvvytd~W~sm~---iq~er~~~~-----------~~~~~~y~vt~~~l~~a~~~ai~mH~--lPa~Rg~ 289 (328)
T 3grf_A 229 KKGCEGVDVVYTDSWMSYH---ITKEQKEAR-----------LKVLTPFQVDDAVMAVTSKRSIFMNC--LPATRGE 289 (328)
T ss_dssp HHHHTTCSEEEECCCC-----------CCTH-----------HHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCTTT
T ss_pred HHHhcCCCEEEecCccccC---CcHHHHHHH-----------HHHhcCCCCCHHHHHhcCCCCEEECC--CCCCCCC
Confidence 345679999998777 44 677776211 01111236899999988889999999 6999984
No 62
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=82.05 E-value=6.2 Score=36.33 Aligned_cols=68 Identities=10% Similarity=-0.003 Sum_probs=45.2
Q ss_pred ccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 41 THGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 41 ~k~ILTViG---pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l-~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
++.-|.+.- +|+||-.+++=+.++.+|+|...++..-.+. .+.|..-++++ . .+-+.++++|+++.+.
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e-~---~~d~~v~~aL~~L~~~ 256 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD-S---AITTDIKKVIAILETL 256 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES-C---CSCHHHHHHHHHHHHT
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe-c---CCcHHHHHHHHHHHHh
Confidence 343444444 8999999999999999999999988763221 23333344444 2 2347788888877543
No 63
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=81.30 E-value=7.1 Score=36.22 Aligned_cols=68 Identities=18% Similarity=0.224 Sum_probs=45.5
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCC-CCeEEEEEEEEeCCCCCCHHHHHHHHHHHHh
Q 021895 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEK-KNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (306)
Q Consensus 41 ~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l-~G~FfMrmeVdv~~~~~~~eeLreaL~~la~ 111 (306)
++.-|.+.-+|+||-.+++=+.++.+|+|...++..-... .+.|...++++ + ..+-+.++++|+++.+
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~e--g-~~~d~~v~~aL~~L~~ 267 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFI--G-HREDQNVHNALENLRE 267 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEE--S-CTTSHHHHHHHHHHHT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEe--c-CCCcHHHHHHHHHHHH
Confidence 3443444447999999999999999999999988763221 23344344554 2 2344778888887654
No 64
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=80.53 E-value=2.9 Score=37.80 Aligned_cols=74 Identities=5% Similarity=0.031 Sum_probs=43.3
Q ss_pred CCceEEEEEeCCc-c-hHHHHHHhhh--cCCCC-eEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 021895 127 PKYKVAVLASKQE-H-CLVDFLYGWQ--EGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (306)
Q Consensus 127 ~~~riavl~S~~g-~-~L~~ll~~~~--~g~l~-~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~ 201 (306)
+|.||+|++.|.- . .+.++ .+.. -...+ ++|++|....+ ..+.++|+++|+|-.+-+ -+++++-
T Consensus 24 kkirvgiIG~G~ig~~H~~a~-~~~~~~~~~~~~~~lvav~d~~~----~~a~~~a~~~g~~~~y~d------~~ell~~ 92 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAW-NAVKTVFGDVERPRLVHLAEANA----GLAEARAGEFGFEKATAD------WRALIAD 92 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHH-TTHHHHHCSSCCCEEEEEECC------TTHHHHHHHHTCSEEESC------HHHHHHC
T ss_pred CCccEEEEcCCHHHHHHHHHH-HhhhhhhccCCCcEEEEEECCCH----HHHHHHHHHhCCCeecCC------HHHHhcC
Confidence 5679999999863 1 12221 1110 12223 79999886542 246889999999965521 2333321
Q ss_pred hcCCcEEEEec
Q 021895 202 VQNTDFLVLAR 212 (306)
Q Consensus 202 v~~~D~vVlA~ 212 (306)
.++|+|++|-
T Consensus 93 -~~iDaV~Iat 102 (393)
T 4fb5_A 93 -PEVDVVSVTT 102 (393)
T ss_dssp -TTCCEEEECS
T ss_pred -CCCcEEEECC
Confidence 1789999984
No 65
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=80.27 E-value=4.7 Score=36.92 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCc--chHHHHHHhhhcCCCCeE-EEEEeeCCCCCCC-----h
Q 021895 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVE-ITCVISNHDRGPN-----S 171 (306)
Q Consensus 100 eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~-I~~Visn~~~~~~-----~ 171 (306)
..+.+.+.+..++.++ ..+..||+|..||.- .+|-.++..++. .++.+ +.+|..||.-.+. .
T Consensus 5 ~~~~~~~~~~i~~~~l---------~~~~~~vlva~SGG~DS~~Ll~ll~~~~~-~~g~~~v~av~vd~g~r~~s~~~~~ 74 (317)
T 1wy5_A 5 SRVIRKVLALQNDEKI---------FSGERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDEE 74 (317)
T ss_dssp HHHHHHHHHHHHHHCS---------CSSCCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC---------CCCCCEEEEEecchHHHHHHHHHHHHHHH-HcCCCEEEEEEEECCCCcccHHHHH
Confidence 4456666665555553 123458999999964 556566655432 34567 8888888742111 3
Q ss_pred hHHHHHHhCCCCEEEeC
Q 021895 172 HVIRFLERHGIPYHYLC 188 (306)
Q Consensus 172 ~~~~~A~~~gIp~~~~~ 188 (306)
.+.++|+++|||++++.
T Consensus 75 ~v~~~a~~lgi~~~v~~ 91 (317)
T 1wy5_A 75 FCKEFAKERNMKIFVGK 91 (317)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHcCCcEEEEE
Confidence 57888999999999876
No 66
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=79.58 E-value=3.8 Score=35.05 Aligned_cols=63 Identities=17% Similarity=0.146 Sum_probs=47.5
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc
Q 021895 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (306)
Q Consensus 40 ~~k~ILTViGp---DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl 115 (306)
..-.+++++|. ++||+.+++-+.|+++|+||.-+++. .-.+.+.++ .++..++++.+-+.|++
T Consensus 94 ~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstS------ei~Is~vV~-------~~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 94 DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS------EIRISVLCR-------DTELDKAVVALHEAFGL 159 (181)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE------TTEEEEEEE-------GGGHHHHHHHHHHHHTC
T ss_pred CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcC------CCEEEEEEe-------HHHHHHHHHHHHHHHcC
Confidence 35578999997 89999999999999999999988842 112334443 35567788888788875
No 67
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=79.04 E-value=12 Score=35.17 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=22.6
Q ss_pred cCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 246 ILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 246 il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+..+.++..+.++|=.|| ||++||-
T Consensus 252 ~v~~ell~~a~~~ai~mH~--lP~~Rg~ 277 (315)
T 1pvv_A 252 QVNKDLVKHAKPDYMFMHC--LPAHRGE 277 (315)
T ss_dssp CBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred CCCHHHHhhcCCCcEEECC--CCCCCCC
Confidence 5888999888889999998 7999984
No 68
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=78.98 E-value=11 Score=35.82 Aligned_cols=69 Identities=10% Similarity=0.027 Sum_probs=45.9
Q ss_pred cEEEEEEcC-CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 42 HGIHVFHCP-DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 42 k~ILTViGp-DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
+.++.+.-. |+||-.+.+=+.++.+|+|...++..-.. .+.+--++.+|+++ ..+-+.++++|+++.+.
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~-~~~~~Y~FfiD~eg-~~~d~~v~~AL~~L~~~ 276 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIK-GRTGTYSFIVTLDA-APWEERFRDALVEIAEH 276 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEEEEEESS-CTTSHHHHHHHHHHHHT
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECC-CCCccEEEEEEEeC-CcCCHHHHHHHHHHHHh
Confidence 344444443 89999999999999999999988775322 22222334456654 33457888888877543
No 69
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=78.90 E-value=7.1 Score=34.07 Aligned_cols=118 Identities=14% Similarity=0.060 Sum_probs=67.1
Q ss_pred CCCceEEEEEeCCcchHHHHHHhhhcC-CCCeEEEEEeeCCCCCCC---hhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 021895 126 DPKYKVAVLASKQEHCLVDFLYGWQEG-KLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~g-~l~~~I~~Visn~~~~~~---~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~ 201 (306)
....||.|...++..+..++-.+..-- ...+++.++-...+.... ....+.++++|+++...-..+ ...+++.+.
T Consensus 168 ~~~~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g-~~~~~I~~~ 246 (294)
T 3loq_A 168 SLFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESG-TPHKAILAK 246 (294)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECS-CHHHHHHHH
T ss_pred ccCCEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecC-CHHHHHHHH
Confidence 345688888877765444433222111 123556555444321111 245567788999966543223 345678887
Q ss_pred hc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCC
Q 021895 202 VQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHG 265 (306)
Q Consensus 202 v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHps 265 (306)
.+ ++|+||+..+.+ .-.++.++| =.+..+++.-+.+++=+|+.
T Consensus 247 a~~~~~dLlV~G~~~~--~~~~~~~~G-------------------s~~~~vl~~~~~pvLvv~~~ 291 (294)
T 3loq_A 247 REEINATTIFMGSRGA--GSVMTMILG-------------------STSESVIRRSPVPVFVCKRG 291 (294)
T ss_dssp HHHTTCSEEEEECCCC--SCHHHHHHH-------------------CHHHHHHHHCSSCEEEECSC
T ss_pred HHhcCcCEEEEeCCCC--CCccceeeC-------------------cHHHHHHhcCCCCEEEECCC
Confidence 76 899999999988 223333333 23455666667777666653
No 70
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=78.76 E-value=19 Score=27.26 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=62.4
Q ss_pred ceEEEEEeCCcchHHHHHHhhhc--CCCCeEEEEEeeCCCCCCC-----------------------hhHHHHHHhCCCC
Q 021895 129 YKVAVLASKQEHCLVDFLYGWQE--GKLPVEITCVISNHDRGPN-----------------------SHVIRFLERHGIP 183 (306)
Q Consensus 129 ~riavl~S~~g~~L~~ll~~~~~--g~l~~~I~~Visn~~~~~~-----------------------~~~~~~A~~~gIp 183 (306)
+||.|-+.++.+...++-++..- ....++++++-...+.... ....+.+++.|++
T Consensus 2 ~~ILv~~D~s~~s~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ 81 (138)
T 3idf_A 2 KKLLFAIDDTEACERAAQYILDMFGKDADCTLTLIHVKPEFMLYGEAVLAAYDEIEMKEEEKAKLLTQKFSTFFTEKGIN 81 (138)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHhccCCCCEEEEEEEecCCCcccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 47888877776655555444332 2345676655443322111 0123445667888
Q ss_pred EEEeCCCCCChHHHHHHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCee
Q 021895 184 YHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVI 260 (306)
Q Consensus 184 ~~~~~~k~~~~e~e~~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iI 260 (306)
+...-..+ ...+++.+..+++|+||+....+ |++...+ .=.+..+++.-+.+++
T Consensus 82 ~~~~v~~g-~~~~~I~~~a~~~dliV~G~~~~---------------------~~~~~~~-Gs~~~~vl~~~~~pVl 135 (138)
T 3idf_A 82 PFVVIKEG-EPVEMVLEEAKDYNLLIIGSSEN---------------------SFLNKIF-ASHQDDFIQKAPIPVL 135 (138)
T ss_dssp CEEEEEES-CHHHHHHHHHTTCSEEEEECCTT---------------------STTSSCC-CCTTCHHHHHCSSCEE
T ss_pred eEEEEecC-ChHHHHHHHHhcCCEEEEeCCCc---------------------chHHHHh-CcHHHHHHhcCCCCEE
Confidence 65432222 34567877777999999987766 3444444 4455666666666654
No 71
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=77.64 E-value=11 Score=35.68 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=35.8
Q ss_pred HHhcCCcEEEEeccCC---CC--cCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhc-CCCeeEeCCCCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYMQ---PV--PLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~-~~~iINiHpsLLP~f~Ga 273 (306)
+.++++|+|..-+|-+ .- +-..+.|-+ -.++.+.++.. +.++|=.|| ||++||-
T Consensus 232 eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~------------------y~v~~ell~~a~k~dai~mH~--LP~~Rg~ 291 (325)
T 1vlv_A 232 EALAGADVVYTDVWASMGEEDKEKERMALLKP------------------YQVNERVMEMTGKSETIFMHC--LPAVKGQ 291 (325)
T ss_dssp HHHTTCSEEEECCCC----------CHHHHGG------------------GCBCHHHHHTTCCTTCEEEEC--SCCCBTT
T ss_pred HHHccCCEEEeccccccccccchHhHHHHHhh------------------cCCCHHHHHhccCCCeEEECC--CCCCCCc
Confidence 4566899999999943 00 000011111 25888999888 778999998 7999984
No 72
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=77.07 E-value=4.2 Score=39.57 Aligned_cols=76 Identities=8% Similarity=0.136 Sum_probs=49.9
Q ss_pred ceEEEEEe-CC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCC---------hHHH
Q 021895 129 YKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENE---------REEE 197 (306)
Q Consensus 129 ~riavl~S-~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~---------~e~e 197 (306)
+||+||+| |+ |++--+++.+. + ..+|+++.+++. -.-..+.|++++..+..+...... -++.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~--~~~vvaL~a~~n---~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~ 76 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--K--GIRLIGISFHSN---LELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHS 76 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--C--SEEEEEEEESSC---HHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTH
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--C--CeEEEEEEccCC---HHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHH
Confidence 68999996 65 45544555543 2 379999988652 245677889999888776532211 1234
Q ss_pred HHHHhc--CCcEEEEe
Q 021895 198 LLELVQ--NTDFLVLA 211 (306)
Q Consensus 198 ~~~~v~--~~D~vVlA 211 (306)
+.+++. ++|+|+.|
T Consensus 77 l~el~~~~~~D~Vv~A 92 (376)
T 3a06_A 77 IEEMLEALKPDITMVA 92 (376)
T ss_dssp HHHHHHHHCCSEEEEC
T ss_pred HHHHhcCCCCCEEEEE
Confidence 555554 79999988
No 73
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=77.06 E-value=3.7 Score=37.57 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=42.0
Q ss_pred CCCceEEEEEeCCc-c-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 126 DPKYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 126 ~~~~riavl~S~~g-~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+++||+|++.|.- . .+.++.. -.-.+++++|.... ...+.++++++|++++. . -+++++. .
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~----~~~~~~lvav~d~~----~~~~~~~~~~~~~~~~~------~-~~~ll~~-~ 74 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEK----HADRAELIDVCDID----PAALKAAVERTGARGHA------S-LTDMLAQ-T 74 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHH----TTTTEEEEEEECSS----HHHHHHHHHHHCCEEES------C-HHHHHHH-C
T ss_pred CCcceEEEEcCcHHHHHHHHHHHh----CCCCeEEEEEEcCC----HHHHHHHHHHcCCceeC------C-HHHHhcC-C
Confidence 46789999999863 2 2233322 11147888886543 23467788889984321 1 2233321 2
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 75 ~~D~V~i~t 83 (354)
T 3q2i_A 75 DADIVILTT 83 (354)
T ss_dssp CCSEEEECS
T ss_pred CCCEEEECC
Confidence 789999874
No 74
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=76.56 E-value=9.1 Score=35.73 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=44.0
Q ss_pred CCceEEEEEeCC----cc-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHH
Q 021895 127 PKYKVAVLASKQ----EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (306)
Q Consensus 127 ~~~riavl~S~~----g~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp--~~~~~~k~~~~e~e~~ 199 (306)
++.||+|++.|. |. .+.++. . .+ .++++++|++++ .....++|+++|+| ..+ .. -++++
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~-~--~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-----~~-~~~ll 76 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAAL-R--DN--TFVLVAGAFDID---PIRGSAFGEQLGVDSERCY-----AD-YLSMF 76 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHH-G--GG--SEEEEEEECCSS---HHHHHHHHHHTTCCGGGBC-----SS-HHHHH
T ss_pred CcceEEEEcCCccchhHHHHHHHHh-h--CC--CeEEEEEEeCCC---HHHHHHHHHHhCCCcceee-----CC-HHHHH
Confidence 468999999997 22 222222 1 22 278888666653 24567889999997 222 11 23455
Q ss_pred HHh----cCCcEEEEec
Q 021895 200 ELV----QNTDFLVLAR 212 (306)
Q Consensus 200 ~~v----~~~D~vVlA~ 212 (306)
+.- .++|+|+++-
T Consensus 77 ~~~~~~~~~vD~V~i~t 93 (398)
T 3dty_A 77 EQEARRADGIQAVSIAT 93 (398)
T ss_dssp HHHTTCTTCCSEEEEES
T ss_pred hcccccCCCCCEEEECC
Confidence 432 1589999874
No 75
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=76.51 E-value=7.2 Score=37.56 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=44.1
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCC-----hhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN-----SHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~-----~~~~~~A~~~gIp~~~~~ 188 (306)
..||+|..||.- .+|-.+|..++......++.+|..||.-.++ ..+.++|+++|||+++..
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 458999999964 5666677665432145789999999843232 257889999999999987
No 76
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=76.08 E-value=4 Score=39.94 Aligned_cols=49 Identities=6% Similarity=-0.066 Sum_probs=37.6
Q ss_pred CcccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEE
Q 021895 39 TLTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFI 91 (306)
Q Consensus 39 ~~~k~ILTViG---pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVd 91 (306)
..+-..|++.| ++++|+.++|-+.|+++|+||.-++|-. +.+.+.+.++
T Consensus 315 ~~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~t----se~~Is~~V~ 366 (473)
T 3c1m_A 315 IKNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGS----SETNISLVVS 366 (473)
T ss_dssp EEEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECC----TTCCEEEEEE
T ss_pred cCCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecC----CCCEEEEEEe
Confidence 34556899998 6788999999999999999999999832 2234445554
No 77
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=76.03 E-value=8.7 Score=35.50 Aligned_cols=70 Identities=11% Similarity=0.128 Sum_probs=43.2
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--C
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--N 204 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~--~ 204 (306)
++.||+|++.|..+. ..++..++.+ .+++++|.... ...+.++|+++|++..+- .. + +++. +
T Consensus 25 ~~irvgiiG~G~~~~-~~~~~~~~~~--~~~lvav~d~~----~~~a~~~a~~~~~~~~~~-----~~-~---~ll~~~~ 88 (361)
T 3u3x_A 25 DELRFAAVGLNHNHI-YGQVNCLLRA--GARLAGFHEKD----DALAAEFSAVYADARRIA-----TA-E---EILEDEN 88 (361)
T ss_dssp -CCEEEEECCCSTTH-HHHHHHHHHT--TCEEEEEECSC----HHHHHHHHHHSSSCCEES-----CH-H---HHHTCTT
T ss_pred cCcEEEEECcCHHHH-HHHHHHhhcC--CcEEEEEEcCC----HHHHHHHHHHcCCCcccC-----CH-H---HHhcCCC
Confidence 367999999997642 1233333333 47999888653 235678899998654441 11 2 3344 5
Q ss_pred CcEEEEec
Q 021895 205 TDFLVLAR 212 (306)
Q Consensus 205 ~D~vVlA~ 212 (306)
+|+|+++.
T Consensus 89 vD~V~I~t 96 (361)
T 3u3x_A 89 IGLIVSAA 96 (361)
T ss_dssp CCEEEECC
T ss_pred CCEEEEeC
Confidence 89999874
No 78
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=75.60 E-value=3 Score=39.01 Aligned_cols=77 Identities=10% Similarity=0.130 Sum_probs=44.5
Q ss_pred CCCCceEEEEEeCCc-c-hHHHHHHhhh-cCCC--CeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH
Q 021895 125 IDPKYKVAVLASKQE-H-CLVDFLYGWQ-EGKL--PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (306)
Q Consensus 125 ~~~~~riavl~S~~g-~-~L~~ll~~~~-~g~l--~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~ 199 (306)
.++|.||+|++.|.- . .+.++..... ...+ .++|++|.... ...+.++|+++|+|-.+- .. ++++
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~----~~~a~~~a~~~~~~~~y~-----d~-~~ll 92 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQD----QAMAERHAAKLGAEKAYG-----DW-RELV 92 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSS----HHHHHHHHHHHTCSEEES-----SH-HHHH
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCC----HHHHHHHHHHcCCCeEEC-----CH-HHHh
Confidence 346789999999863 2 2333322110 1112 37898887543 245788899999986552 12 2333
Q ss_pred HHhcCCcEEEEec
Q 021895 200 ELVQNTDFLVLAR 212 (306)
Q Consensus 200 ~~v~~~D~vVlA~ 212 (306)
+- .++|+|+++-
T Consensus 93 ~~-~~vD~V~I~t 104 (412)
T 4gqa_A 93 ND-PQVDVVDITS 104 (412)
T ss_dssp HC-TTCCEEEECS
T ss_pred cC-CCCCEEEECC
Confidence 21 1789999874
No 79
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=75.58 E-value=36 Score=32.11 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=36.8
Q ss_pred HHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccc-cccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+.++++|+|..-+|-. +++=.. .-....|+ .-.+..+.++..+.++|=.|| ||++||-
T Consensus 220 ~eav~~aDvvyt~~wqs------~g~~~~--------~~~~~~~~~~y~vt~ell~~ak~dai~mHc--lPa~Rg~ 279 (323)
T 3gd5_A 220 FEAARGAHILYTDVWTS------MGQEAE--------TQHRLQLFEQYQINAALLNCAAAEAIVLHC--LPAHRGE 279 (323)
T ss_dssp HHHHTTCSEEEECCCC-----------------------CCHHHHTTCCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred HHHhcCCCEEEEeceec------CCCccc--------chHHHHHhhccCCCHHHHhhcCCCcEEECC--CCCCCCc
Confidence 34567899999998833 111000 00111122 225899999988889999999 6999984
No 80
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=75.20 E-value=4.6 Score=31.99 Aligned_cols=71 Identities=15% Similarity=0.233 Sum_probs=43.2
Q ss_pred CCCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh--
Q 021895 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV-- 202 (306)
Q Consensus 126 ~~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v-- 202 (306)
+-+.+|+|++.|. |..+...|.. .| .+++++-.|. ...+.+++.|+++.+-+. .++++++..
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~--~g---~~v~vid~~~------~~~~~~~~~g~~~i~gd~----~~~~~l~~a~i 69 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLA--SD---IPLVVIETSR------TRVDELRERGVRAVLGNA----ANEEIMQLAHL 69 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEESCT----TSHHHHHHTTG
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHHcCCCEEECCC----CCHHHHHhcCc
Confidence 3456899999876 4555555543 23 5676665543 235667778998766432 223444443
Q ss_pred cCCcEEEEe
Q 021895 203 QNTDFLVLA 211 (306)
Q Consensus 203 ~~~D~vVlA 211 (306)
.++|++|++
T Consensus 70 ~~ad~vi~~ 78 (140)
T 3fwz_A 70 ECAKWLILT 78 (140)
T ss_dssp GGCSEEEEC
T ss_pred ccCCEEEEE
Confidence 488988876
No 81
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=74.07 E-value=5.2 Score=36.12 Aligned_cols=72 Identities=6% Similarity=-0.022 Sum_probs=43.2
Q ss_pred CceEEEEEeCCc-c-hHHHHHHhhhcCC--CCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 128 KYKVAVLASKQE-H-CLVDFLYGWQEGK--LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g-~-~L~~ll~~~~~g~--l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
|.||+|++.|.- . .+.++...-.--. ..++|++|.... ...+.++|+++|+|..+-+ +-+++.
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~----~~~a~~~a~~~g~~~~~~d---------~~~ll~ 72 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRD----AEAVRAAAGKLGWSTTETD---------WRTLLE 72 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSS----HHHHHHHHHHHTCSEEESC---------HHHHTT
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCC----HHHHHHHHHHcCCCcccCC---------HHHHhc
Confidence 579999998862 1 2333322111111 136888887543 2456788999999966521 223454
Q ss_pred --CCcEEEEec
Q 021895 204 --NTDFLVLAR 212 (306)
Q Consensus 204 --~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 73 ~~~iDaV~I~t 83 (390)
T 4h3v_A 73 RDDVQLVDVCT 83 (390)
T ss_dssp CTTCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 689999974
No 82
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=72.96 E-value=10 Score=34.37 Aligned_cols=74 Identities=20% Similarity=0.190 Sum_probs=43.5
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcE
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~ 207 (306)
++||+|++.|.-. ...+..+ .+ .++|++|....+......+.++++++|++..... . -+++++- .++|+
T Consensus 2 ~~rvgiiG~G~~~--~~~~~~l-~~--~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~ll~~-~~vD~ 70 (337)
T 3ip3_A 2 SLKICVIGSSGHF--RYALEGL-DE--ECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYN----N-WWEMLEK-EKPDI 70 (337)
T ss_dssp CEEEEEECSSSCH--HHHHTTC-CT--TEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECS----S-HHHHHHH-HCCSE
T ss_pred ceEEEEEccchhH--HHHHHhc-CC--CcEEEEEecCCchhhHHHHHHHHHHcCCCCcccC----C-HHHHhcC-CCCCE
Confidence 5799999986521 2445444 22 4899999875421122345666778898543322 1 2334332 27999
Q ss_pred EEEec
Q 021895 208 LVLAR 212 (306)
Q Consensus 208 vVlA~ 212 (306)
|+++-
T Consensus 71 V~I~t 75 (337)
T 3ip3_A 71 LVINT 75 (337)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99973
No 83
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=72.49 E-value=8.1 Score=38.19 Aligned_cols=67 Identities=16% Similarity=0.119 Sum_probs=43.6
Q ss_pred cEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC-CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 42 HGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 42 k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~-l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
+.-|.+.-+|++|-.+++=+.++.+|+|+..+...-.. ..+.|. +-||++ ..+-+.++++|+++.+.
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~--FfVD~e--h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYE--FFTYLD--KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEE--EEECBC--GGGHHHHHHHHHHHHHT
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEE--EEEEEe--eCCCHHHHHHHHHHHhh
Confidence 33333444899999999999999999999987775221 123333 334443 22345688888877554
No 84
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=71.38 E-value=3.6 Score=37.26 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=42.6
Q ss_pred CceEEEEEeCCcchHHHHHHhhhc-CCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~-g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
+.||+|++.|.-. ...+..++. +...+++++|.+.. ...+.++|+++|+|..+- .. +++++- .++|
T Consensus 2 ~~rigiiG~G~ig--~~~~~~l~~~~~~~~~l~av~d~~----~~~a~~~a~~~~~~~~~~-----~~-~~ll~~-~~vD 68 (334)
T 3ohs_X 2 ALRWGIVSVGLIS--SDFTAVLQTLPRSEHQVVAVAARD----LSRAKEFAQKHDIPKAYG-----SY-EELAKD-PNVE 68 (334)
T ss_dssp CEEEEEECCSHHH--HHHHHHHTTSCTTTEEEEEEECSS----HHHHHHHHHHHTCSCEES-----SH-HHHHHC-TTCC
T ss_pred ccEEEEECchHHH--HHHHHHHHhCCCCCeEEEEEEcCC----HHHHHHHHHHcCCCcccC-----CH-HHHhcC-CCCC
Confidence 4699999998631 123333322 21236888886643 235678899999984441 11 233321 1689
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|++|-
T Consensus 69 ~V~i~t 74 (334)
T 3ohs_X 69 VAYVGT 74 (334)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999974
No 85
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=70.73 E-value=8.5 Score=31.65 Aligned_cols=39 Identities=8% Similarity=-0.169 Sum_probs=32.3
Q ss_pred CCcccEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 021895 38 PTLTHGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (306)
Q Consensus 38 p~~~k~ILTViG---pDRpGIVAaVS~~LAe~G~NIlD~sQ~ 76 (306)
-...-..|++.| +|++|+.++|-+.|+++|+||.-+.|.
T Consensus 14 ~~~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s 55 (157)
T 3mah_A 14 AKDGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATS 55 (157)
T ss_dssp EEEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECC
T ss_pred ecCCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEec
Confidence 344556788885 578999999999999999999988873
No 86
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=70.47 E-value=8.7 Score=35.04 Aligned_cols=73 Identities=26% Similarity=0.219 Sum_probs=42.9
Q ss_pred CCCCceEEEEEeC-C-cc-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 021895 125 IDPKYKVAVLASK-Q-EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (306)
Q Consensus 125 ~~~~~riavl~S~-~-g~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~ 201 (306)
..++.||+|++.| . +. .+.++. . .+ -.+++++|.... ...+.++|+++|+|..+-+ . +++++-
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~-~--~~-~~~~lvav~d~~----~~~~~~~a~~~~~~~~~~~-----~-~~ll~~ 80 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALK-N--LS-HLFEITAVTSRT----RSHAEEFAKMVGNPAVFDS-----Y-EELLES 80 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHH-T--TT-TTEEEEEEECSS----HHHHHHHHHHHSSCEEESC-----H-HHHHHS
T ss_pred CCCceeEEEEecCHHHHHHHHHHHH-h--CC-CceEEEEEEcCC----HHHHHHHHHHhCCCcccCC-----H-HHHhcC
Confidence 3467899999998 3 32 333332 2 11 137898877643 2356778899998654411 1 223221
Q ss_pred hcCCcEEEEec
Q 021895 202 VQNTDFLVLAR 212 (306)
Q Consensus 202 v~~~D~vVlA~ 212 (306)
.++|+|+++-
T Consensus 81 -~~vD~V~i~t 90 (340)
T 1zh8_A 81 -GLVDAVDLTL 90 (340)
T ss_dssp -SCCSEEEECC
T ss_pred -CCCCEEEEeC
Confidence 1689999974
No 87
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=69.81 E-value=25 Score=31.22 Aligned_cols=84 Identities=13% Similarity=0.203 Sum_probs=48.8
Q ss_pred CCCCceEEEEEeCCc---chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 021895 125 IDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (306)
Q Consensus 125 ~~~~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~ 201 (306)
...++||.|+.+|+. .-.++++.....+. .+|.--=+.....++..+++.++++||+......+.- +++.
T Consensus 78 ~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~~~sr~l--~~~~--- 150 (213)
T 3t38_A 78 ASPVPQVLFICVHNAGRSQIASALLSHYAGSS--VEVRSAGSLPASEIHPLVLEILSERGVNISDAFPKPL--TDDV--- 150 (213)
T ss_dssp SSCCCEEEEEESSSSSHHHHHHHHHHHHHGGG--CEEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCCBC--CHHH---
T ss_pred cCCCCEEEEECCCchhHHHHHHHHHHHhccCc--eEEEecccCCCCCCCHHHHHHHHHcCCCcccCcCCcC--CHHH---
Confidence 345789999999985 34455665554333 3332211232223677889999999998642222211 1222
Q ss_pred hcCCcEEEEeccCC
Q 021895 202 VQNTDFLVLARYMQ 215 (306)
Q Consensus 202 v~~~D~vVlA~ym~ 215 (306)
+.+.|+|+...-..
T Consensus 151 ~~~~DlIitMd~~~ 164 (213)
T 3t38_A 151 IRASDYVITMGCGD 164 (213)
T ss_dssp HHHCSEEEESSCCS
T ss_pred hccCCEEEEecCcc
Confidence 23789999975544
No 88
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=69.78 E-value=11 Score=36.01 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=40.8
Q ss_pred CCceEEEEEe----CC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHH
Q 021895 127 PKYKVAVLAS----KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (306)
Q Consensus 127 ~~~riavl~S----~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp--~~~~~~k~~~~e~e~~ 199 (306)
++.||+|++. |. +......|.... + .++|++|.... ...+.++|+++|+| ..+ . .. ++
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~-~--~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~-~----~~-~~-- 83 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLS-S--QFQITALYSPK----IETSIATIQRLKLSNATAF-P----TL-ES-- 83 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTT-T--TEEEEEEECSS----HHHHHHHHHHTTCTTCEEE-S----SH-HH--
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcC-C--CeEEEEEEeCC----HHHHHHHHHHcCCCcceee-C----CH-HH--
Confidence 4679999998 44 333323333210 1 37888876543 23467789999997 222 1 11 22
Q ss_pred HHhc--CCcEEEEec
Q 021895 200 ELVQ--NTDFLVLAR 212 (306)
Q Consensus 200 ~~v~--~~D~vVlA~ 212 (306)
++. ++|+|+++-
T Consensus 84 -ll~~~~vD~V~i~t 97 (438)
T 3btv_A 84 -FASSSTIDMIVIAI 97 (438)
T ss_dssp -HHHCSSCSEEEECS
T ss_pred -HhcCCCCCEEEEeC
Confidence 333 688888873
No 89
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=69.67 E-value=6.6 Score=36.50 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=41.7
Q ss_pred CceEEEEEeC-Cc-c-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcC
Q 021895 128 KYKVAVLASK-QE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 128 ~~riavl~S~-~g-~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~ 204 (306)
++||+|++.| .. . .+..+. . .+ .+++++|+... .....++|+++|+|++. . -+++++. .+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~-~--~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~------~-~~ell~~-~~ 64 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMR-H--HP--DAQIVAACDPN----EDVRERFGKEYGIPVFA------T-LAEMMQH-VQ 64 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHH-H--CT--TEEEEEEECSC----HHHHHHHHHHHTCCEES------S-HHHHHHH-SC
T ss_pred ceEEEEEeCCHHHHHHHHHHHH-h--CC--CeEEEEEEeCC----HHHHHHHHHHcCCCeEC------C-HHHHHcC-CC
Confidence 6799999998 42 2 333332 2 12 37898887643 23466788999998432 1 2333331 26
Q ss_pred CcEEEEec
Q 021895 205 TDFLVLAR 212 (306)
Q Consensus 205 ~D~vVlA~ 212 (306)
+|+|+++-
T Consensus 65 vD~V~i~t 72 (387)
T 3moi_A 65 MDAVYIAS 72 (387)
T ss_dssp CSEEEECS
T ss_pred CCEEEEcC
Confidence 89999874
No 90
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=69.47 E-value=5 Score=33.47 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=30.0
Q ss_pred EEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeec
Q 021895 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFV 77 (306)
Q Consensus 43 ~ILTViG---pDRpGIVAaVS~~LAe~G~NIlD~sQ~i 77 (306)
..||+.| -|-+|++|+|++.|+++|+-|--++.|.
T Consensus 72 r~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iSty~ 109 (133)
T 1zvp_A 72 SLITLTVHSSLEAVGLTAAFATKLAEHGISANVIAGYY 109 (133)
T ss_dssp EEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEECSS
T ss_pred EEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 4677766 5999999999999999999999998874
No 91
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=69.12 E-value=17 Score=32.71 Aligned_cols=72 Identities=8% Similarity=0.107 Sum_probs=41.6
Q ss_pred CCCCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 125 IDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 125 ~~~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
..+++||+|++.|.- ... +..+....-.+++++|.... .....++|+++|++..+- . +.+++.
T Consensus 5 ~~~~~~v~iiG~G~ig~~~---~~~l~~~~~~~~~vav~d~~----~~~~~~~a~~~g~~~~~~-----~----~~~~l~ 68 (346)
T 3cea_A 5 TRKPLRAAIIGLGRLGERH---ARHLVNKIQGVKLVAACALD----SNQLEWAKNELGVETTYT-----N----YKDMID 68 (346)
T ss_dssp CCCCEEEEEECCSTTHHHH---HHHHHHTCSSEEEEEEECSC----HHHHHHHHHTTCCSEEES-----C----HHHHHT
T ss_pred CCCcceEEEEcCCHHHHHH---HHHHHhcCCCcEEEEEecCC----HHHHHHHHHHhCCCcccC-----C----HHHHhc
Confidence 346789999999863 322 22222011137888776543 234567788899874331 1 123343
Q ss_pred --CCcEEEEec
Q 021895 204 --NTDFLVLAR 212 (306)
Q Consensus 204 --~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 69 ~~~~D~V~i~t 79 (346)
T 3cea_A 69 TENIDAIFIVA 79 (346)
T ss_dssp TSCCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 689888874
No 92
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=69.06 E-value=43 Score=31.92 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=36.5
Q ss_pred HHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+.++++|+|..-+|-. +++-+. .+.+ ..+..-.+.++.++..+.++|=.|| ||++||-
T Consensus 242 ~eav~~aDVvyt~~w~s------mg~e~~--~~~~------~~~~~y~vt~ell~~ak~dai~MHc--LPa~Rg~ 300 (340)
T 4ep1_A 242 ELAVNEADFIYTDVWMS------MGQEGE--EEKY------TLFQPYQINKELVKHAKQTYHFLHC--LPAHREE 300 (340)
T ss_dssp HHHHTTCSEEEECCC------------CH--HHHH------HHHGGGCBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred HHHhCCCCEEEecCccC------CCCCch--HHHH------HHhccccCCHHHHHhcCCCcEEECC--CCCCCCc
Confidence 34566899999988832 221111 0111 1112236899999888889999999 6999983
No 93
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=68.59 E-value=9.7 Score=34.35 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=40.7
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--CC
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NT 205 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~ 205 (306)
+.||+|++.|..+.. .++..++.. .++|++|....+ ..+.++|++++.+..+ .. +.++++ ++
T Consensus 4 ~~rvgiiG~G~~~~~-~~~~~l~~~--~~~lvav~d~~~----~~~~~~a~~~~~~~~~-----~~----~~~ll~~~~~ 67 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIY-DMCQQLIDA--GAELAGVFESDS----DNRAKFTSLFPSVPFA-----AS----AEQLITDASI 67 (336)
T ss_dssp CCEEEEECCSSTHHH-HHHHHHHHT--TCEEEEEECSCT----TSCHHHHHHSTTCCBC-----SC----HHHHHTCTTC
T ss_pred ccEEEEECCChHHHH-HhhhhhcCC--CcEEEEEeCCCH----HHHHHHHHhcCCCccc-----CC----HHHHhhCCCC
Confidence 679999999876531 233333332 478988876542 2346788888533211 11 223444 68
Q ss_pred cEEEEec
Q 021895 206 DFLVLAR 212 (306)
Q Consensus 206 D~vVlA~ 212 (306)
|+|+++-
T Consensus 68 D~V~i~t 74 (336)
T 2p2s_A 68 DLIACAV 74 (336)
T ss_dssp CEEEECS
T ss_pred CEEEEeC
Confidence 9998874
No 94
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=68.54 E-value=9.2 Score=36.11 Aligned_cols=72 Identities=6% Similarity=0.045 Sum_probs=42.1
Q ss_pred CCceEEEEEeCCcc-----hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHH
Q 021895 127 PKYKVAVLASKQEH-----CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELL 199 (306)
Q Consensus 127 ~~~riavl~S~~g~-----~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp--~~~~~~k~~~~e~e~~ 199 (306)
++.||+|++.|.+. .+.++. ..+ .+++++.|++++ ...+.++|+++|+| ..+ .. -++++
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~---~~~--~~~lva~v~d~~---~~~a~~~a~~~g~~~~~~~-----~~-~~~ll 101 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAAR---LDD--HYELVAGALSST---PEKAEASGRELGLDPSRVY-----SD-FKEMA 101 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHH---HTS--CEEEEEEECCSS---HHHHHHHHHHHTCCGGGBC-----SC-HHHHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHh---hCC--CcEEEEEEeCCC---HHHHHHHHHHcCCCccccc-----CC-HHHHH
Confidence 46899999999721 122221 122 278887565552 24567889999997 222 11 23454
Q ss_pred HHh----cCCcEEEEec
Q 021895 200 ELV----QNTDFLVLAR 212 (306)
Q Consensus 200 ~~v----~~~D~vVlA~ 212 (306)
+.- .++|+|+++-
T Consensus 102 ~~~~~~~~~vD~V~I~t 118 (417)
T 3v5n_A 102 IREAKLKNGIEAVAIVT 118 (417)
T ss_dssp HHHHHCTTCCSEEEECS
T ss_pred hcccccCCCCcEEEECC
Confidence 432 2589999874
No 95
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=68.24 E-value=8.4 Score=34.91 Aligned_cols=71 Identities=20% Similarity=0.327 Sum_probs=42.1
Q ss_pred CCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 127 ~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
+++||+|++.|.- .. ++..+..- -.+++++|.... ...+.++|+++|+|..+ .. -+++++- .++
T Consensus 4 ~~~~igiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~-----~~-~~~ll~~-~~~ 68 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPR---FVAGLRES-AQAEVRGIASRR----LENAQKMAKELAIPVAY-----GS-YEELCKD-ETI 68 (330)
T ss_dssp CCEEEEECSCCTTHHH---HHHHHHHS-SSEEEEEEBCSS----SHHHHHHHHHTTCCCCB-----SS-HHHHHHC-TTC
T ss_pred CeEEEEEECchHHHHH---HHHHHHhC-CCcEEEEEEeCC----HHHHHHHHHHcCCCcee-----CC-HHHHhcC-CCC
Confidence 4689999999873 22 22232221 137888876543 24577889999987322 11 1233221 178
Q ss_pred cEEEEec
Q 021895 206 DFLVLAR 212 (306)
Q Consensus 206 D~vVlA~ 212 (306)
|+|+++-
T Consensus 69 D~V~i~t 75 (330)
T 3e9m_A 69 DIIYIPT 75 (330)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9999874
No 96
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=68.13 E-value=34 Score=27.39 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=50.3
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEE--eeCCCCCC-----------------C-----hhHHHHHHhCCC
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCV--ISNHDRGP-----------------N-----SHVIRFLERHGI 182 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~V--isn~~~~~-----------------~-----~~~~~~A~~~gI 182 (306)
..+||.|-+.++.....++-++..--+..+++.++ -.-.+... . ....+.++..|+
T Consensus 16 ~~~~ILv~vD~s~~s~~al~~A~~lA~~~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gv 95 (163)
T 1tq8_A 16 AYKTVVVGTDGSDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGA 95 (163)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHTTTSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTTC
T ss_pred cCCEEEEEcCCCHHHHHHHHHHHHHhCCCCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45689988888776655554433211145777766 22111000 0 122344567889
Q ss_pred C-EEEeCCCCCChHHHHHHHhc--CCcEEEEeccCC
Q 021895 183 P-YHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 183 p-~~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
+ +...-..+ ...+++.+..+ ++|+||+....+
T Consensus 96 ~~v~~~v~~G-~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 96 KNVEERPIVG-APVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp CEEEEEEECS-SHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred CeEEEEEecC-CHHHHHHHHHHhcCCCEEEECCCCC
Confidence 8 65433222 34567888775 899999988776
No 97
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=67.85 E-value=6.4 Score=35.62 Aligned_cols=69 Identities=20% Similarity=0.317 Sum_probs=38.2
Q ss_pred CCceEEEEEeCCcchHHHHHHhhh-cCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~-~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~-- 203 (306)
+++||+|++.|.-. ..++.++. .+ .+++++|.+..+ ..+.++|+++|+|..+- . -+ +++.
T Consensus 4 ~~~rigiiG~G~ig--~~~~~~l~~~~--~~~~~av~d~~~----~~~~~~a~~~~~~~~~~-----~-~~---~ll~~~ 66 (329)
T 3evn_A 4 SKVRYGVVSTAKVA--PRFIEGVRLAG--NGEVVAVSSRTL----ESAQAFANKYHLPKAYD-----K-LE---DMLADE 66 (329)
T ss_dssp -CEEEEEEBCCTTH--HHHHHHHHHHC--SEEEEEEECSCS----STTCC---CCCCSCEES-----C-HH---HHHTCT
T ss_pred CceEEEEEechHHH--HHHHHHHHhCC--CcEEEEEEcCCH----HHHHHHHHHcCCCcccC-----C-HH---HHhcCC
Confidence 46799999998631 12222222 22 378888876432 23456788999884331 1 12 3344
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+|++|-
T Consensus 67 ~~D~V~i~t 75 (329)
T 3evn_A 67 SIDVIYVAT 75 (329)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEECC
Confidence 789999874
No 98
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=67.65 E-value=15 Score=33.65 Aligned_cols=79 Identities=13% Similarity=0.178 Sum_probs=45.3
Q ss_pred CceEEEEEeCC-cchH--HHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCC----CChH-----
Q 021895 128 KYKVAVLASKQ-EHCL--VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE----NERE----- 195 (306)
Q Consensus 128 ~~riavl~S~~-g~~L--~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~----~~~e----- 195 (306)
++||.+.+.|. ||-. .+|.+.+++- .++|..|-+.+ + .-.+..++.|+|++.++... ...+
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~--g---~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~ 74 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPR--G---IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAP 74 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSS--S---THHHHTGGGTCCEEECC--------------CH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCc--h---HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHH
Confidence 46898888877 4632 3555665543 47887665543 1 12355678899999887321 0000
Q ss_pred -------HHHHHHhc--CCcEEEEecc
Q 021895 196 -------EELLELVQ--NTDFLVLARY 213 (306)
Q Consensus 196 -------~e~~~~v~--~~D~vVlA~y 213 (306)
.+..++++ +||+||.-|.
T Consensus 75 ~~~~~~~~~~~~~l~~~~PDvVi~~g~ 101 (365)
T 3s2u_A 75 LELLKSLFQALRVIRQLRPVCVLGLGG 101 (365)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 12334454 8999997654
No 99
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=67.46 E-value=14 Score=36.23 Aligned_cols=81 Identities=14% Similarity=0.038 Sum_probs=49.5
Q ss_pred EEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHH-HHHHHHHHHHhhhhcccc
Q 021895 43 GIHVFHC---PDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPRE-QMDEDFFKLSKMFNAMRS 118 (306)
Q Consensus 43 ~ILTViG---pDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~e-eLreaL~~la~elgl~~~ 118 (306)
..|++.| +|++|+.++|-+.|+++|+||.-+.+.. . .+.+.++-. +.+ .+++.++++.++++..
T Consensus 299 ~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~~----~--~is~~V~~~----d~~~~~~~~~~el~~~~~~~-- 366 (446)
T 3tvi_A 299 TVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGV----D--SVSLVIEDC----KLDGKCDKIIEEIKKQCNPD-- 366 (446)
T ss_dssp EEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEET----T--EEEEEEEHH----HHTTTHHHHHHHHHHHSCCS--
T ss_pred EEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecCC----C--EEEEEEecc----hHHHHHHHHHHHHHHhcCCC--
Confidence 4588888 5899999999999999999999887631 1 223333321 122 3444555555555421
Q ss_pred eeeecCCCCCceEEEEEeC
Q 021895 119 VVRVPDIDPKYKVAVLASK 137 (306)
Q Consensus 119 ~~rl~~~~~~~riavl~S~ 137 (306)
...+ .+.--+|++.+.+
T Consensus 367 ~v~v--~~~vA~VSvVG~g 383 (446)
T 3tvi_A 367 SIEI--HPNMALVATVGTG 383 (446)
T ss_dssp EEEE--EEEEEEEEEECGG
T ss_pred cEEE--eCCeEEEEEECCC
Confidence 1111 2234577777765
No 100
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=67.37 E-value=7.6 Score=35.66 Aligned_cols=67 Identities=21% Similarity=0.200 Sum_probs=41.9
Q ss_pred CCceEEEEEeCCc-c--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 127 PKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 127 ~~~riavl~S~~g-~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
+++||+|++.|.- . .+.+|.. .+ .+++++|.+.. ...+.++|+++|+|... .. + +++.
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~---~~--~~~l~av~d~~----~~~~~~~a~~~g~~~~~------~~-~---~ll~ 86 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEA---EP--LTEVTAIASRR----WDRAKRFTERFGGEPVE------GY-P---ALLE 86 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHH---CT--TEEEEEEEESS----HHHHHHHHHHHCSEEEE------SH-H---HHHT
T ss_pred CceEEEEEcCcHHHHHHHHHHHHh---CC--CeEEEEEEcCC----HHHHHHHHHHcCCCCcC------CH-H---HHhc
Confidence 4679999999863 2 2333322 12 37888887643 23567888999998642 11 2 3343
Q ss_pred --CCcEEEEec
Q 021895 204 --NTDFLVLAR 212 (306)
Q Consensus 204 --~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 87 ~~~~D~V~i~t 97 (350)
T 3rc1_A 87 RDDVDAVYVPL 97 (350)
T ss_dssp CTTCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 689999874
No 101
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=67.18 E-value=15 Score=33.71 Aligned_cols=74 Identities=12% Similarity=0.127 Sum_probs=41.9
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
.++||+|++.|.-. ...+..+....-.+++++|.... ...+.++|+++|++..... . -+++++. .++|
T Consensus 22 ~~~rvgiIG~G~~g--~~~~~~l~~~~~~~~lvav~d~~----~~~~~~~a~~~g~~~~~~~----~-~~~ll~~-~~~D 89 (357)
T 3ec7_A 22 MTLKAGIVGIGMIG--SDHLRRLANTVSGVEVVAVCDIV----AGRAQAALDKYAIEAKDYN----D-YHDLIND-KDVE 89 (357)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHHHTCTTEEEEEEECSS----TTHHHHHHHHHTCCCEEES----S-HHHHHHC-TTCC
T ss_pred CeeeEEEECCcHHH--HHHHHHHHhhCCCcEEEEEEeCC----HHHHHHHHHHhCCCCeeeC----C-HHHHhcC-CCCC
Confidence 46799999998621 12223332111137888877643 2346788999997433322 1 1233321 1689
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++-
T Consensus 90 ~V~i~t 95 (357)
T 3ec7_A 90 VVIITA 95 (357)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999875
No 102
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=66.73 E-value=17 Score=32.88 Aligned_cols=73 Identities=12% Similarity=0.173 Sum_probs=41.6
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcE
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~ 207 (306)
++||+|++.|.-. ...+..+....-.+++++|.... ...+.++++++||+..... . -+++++. .++|+
T Consensus 2 ~~rigiIG~G~~g--~~~~~~l~~~~~~~~l~av~d~~----~~~~~~~~~~~g~~~~~~~----~-~~~ll~~-~~~D~ 69 (344)
T 3mz0_A 2 SLRIGVIGTGAIG--KEHINRITNKLSGAEIVAVTDVN----QEAAQKVVEQYQLNATVYP----N-DDSLLAD-ENVDA 69 (344)
T ss_dssp CEEEEEECCSHHH--HHHHHHHHHTCSSEEEEEEECSS----HHHHHHHHHHTTCCCEEES----S-HHHHHHC-TTCCE
T ss_pred eEEEEEECccHHH--HHHHHHHHhhCCCcEEEEEEcCC----HHHHHHHHHHhCCCCeeeC----C-HHHHhcC-CCCCE
Confidence 4699999998621 12233333111137888876543 2356778999997544332 1 1233321 15899
Q ss_pred EEEec
Q 021895 208 LVLAR 212 (306)
Q Consensus 208 vVlA~ 212 (306)
|+++-
T Consensus 70 V~i~t 74 (344)
T 3mz0_A 70 VLVTS 74 (344)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99975
No 103
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=66.63 E-value=24 Score=28.11 Aligned_cols=87 Identities=10% Similarity=0.171 Sum_probs=48.5
Q ss_pred CceEEEEEeC-CcchHHHHHHhhhcC-CCCeEEE--EEeeCCCCCCC-----------hhHHHHHHhCCCCEEEeC-CCC
Q 021895 128 KYKVAVLASK-QEHCLVDFLYGWQEG-KLPVEIT--CVISNHDRGPN-----------SHVIRFLERHGIPYHYLC-AKE 191 (306)
Q Consensus 128 ~~riavl~S~-~g~~L~~ll~~~~~g-~l~~~I~--~Visn~~~~~~-----------~~~~~~A~~~gIp~~~~~-~k~ 191 (306)
.+||.|-+.+ +.....++-.+..-- ...+++. .|+...+. .. ....+.+++.|+++.+-. ...
T Consensus 24 ~~~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~ 102 (155)
T 3dlo_A 24 YMPIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGR-TKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRG 102 (155)
T ss_dssp CCCEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTT-SCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESS
T ss_pred cCeEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCc-ccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecC
Confidence 3588888888 665554443332211 1123444 44433211 11 123556777899876421 122
Q ss_pred CChHHHHHHHhc--CCcEEEEeccCC
Q 021895 192 NEREEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 192 ~~~e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
....+++++..+ ++|+||+....+
T Consensus 103 G~~~~~I~~~a~~~~~DLIV~G~~g~ 128 (155)
T 3dlo_A 103 KEPPDDIVDFADEVDAIAIVIGIRKR 128 (155)
T ss_dssp SCHHHHHHHHHHHTTCSEEEEECCEE
T ss_pred CCHHHHHHHHHHHcCCCEEEECCCCC
Confidence 234567888877 899999987765
No 104
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=66.51 E-value=15 Score=28.04 Aligned_cols=59 Identities=17% Similarity=0.076 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEee
Q 021895 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (306)
Q Consensus 101 eLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Vis 163 (306)
-+|.-...+|.++|+..|..+.. +- +|-+.+.|+...+.+++..++.|.-++.|.-|-.
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~--dG--~Vei~~eG~~~~i~~f~~~l~~~~p~a~V~~v~~ 74 (91)
T 2fhm_A 16 GFRYFVQMEADKRKLAGWVKNRD--DG--RVEILAEGPENALQSFVEAVKNGSPFSKVTDISV 74 (91)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECT--TS--CEEEEEEECHHHHHHHHHHHHTTCSSSEEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEECC--CC--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEEE
Confidence 36778888899999887643332 22 6888888888889999999888865588877643
No 105
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=66.42 E-value=28 Score=30.47 Aligned_cols=79 Identities=13% Similarity=0.138 Sum_probs=46.1
Q ss_pred CCceEEEEEeC-----Cc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCC-C---hH
Q 021895 127 PKYKVAVLASK-----QE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN-E---RE 195 (306)
Q Consensus 127 ~~~riavl~S~-----~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~-~---~e 195 (306)
+++||+++... .| ..+..+...+ . ..+|+.+..+.+ ......+....+++++.++.... . .-
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~---g~~v~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-D---PESIVVFASTQN---AEEAHAYDKTLDYEVIRWPRSVMLPTPTTA 75 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-C---GGGEEEEEECSS---HHHHHHHHTTCSSEEEEESSSSCCSCHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-c---CCeEEEEECCCC---ccchhhhccccceEEEEccccccccchhhH
Confidence 47899998862 22 3455566555 2 367876666552 22224455677888888774221 1 12
Q ss_pred HHHHHHhc--CCcEEEEec
Q 021895 196 EELLELVQ--NTDFLVLAR 212 (306)
Q Consensus 196 ~e~~~~v~--~~D~vVlA~ 212 (306)
..+.++++ ++|+|++-.
T Consensus 76 ~~l~~~~~~~~~Dvv~~~~ 94 (394)
T 3okp_A 76 HAMAEIIREREIDNVWFGA 94 (394)
T ss_dssp HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 45666665 899998644
No 106
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=66.16 E-value=9.3 Score=33.63 Aligned_cols=62 Identities=18% Similarity=0.203 Sum_probs=47.1
Q ss_pred ccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc
Q 021895 41 THGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (306)
Q Consensus 41 ~k~ILTViGp---DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl 115 (306)
.-+.|+++|. .+||+-|++-+.|++.|+||.-++. . + -.+-+.++ .++...+++.+-+.|++
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIst--S-E---i~IS~vV~-------~~d~~~Av~aLH~~F~L 178 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIST--S-E---IRISVLCR-------DTELDKAVVALHEAFGL 178 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEE--C-S---SEEEEEEE-------GGGHHHHHHHHHHHHTC
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEc--c-C---CEEEEEEe-------HHHHHHHHHHHHHHhCC
Confidence 4467888884 6889999999999999999999874 1 1 12233332 46788899999999986
No 107
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=65.89 E-value=13 Score=36.08 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=37.8
Q ss_pred CceEEEEEe-CC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCC
Q 021895 128 KYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 128 ~~riavl~S-~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~ 189 (306)
++||++++| |+ |+...+++.+.. + ..+++++.++++ -....+.++++++.+..+..
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p-~--~~~v~al~ag~n---i~~l~~~~~~f~~~~v~v~d 61 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNL-D--RYQVIALTANRN---VKDLADAAKRTNAKRAVIAD 61 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTG-G--GEEEEEEEESSC---HHHHHHHHHHTTCSEEEESC
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCc-C--cEEEEEEEcCCC---HHHHHHHHHHcCCcEEEEcC
Confidence 479999999 76 566556665421 1 167888867652 23567788999998876653
No 108
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=65.50 E-value=18 Score=31.54 Aligned_cols=68 Identities=18% Similarity=0.275 Sum_probs=42.5
Q ss_pred HHHHHHhCCCC---EEEeCCCCCChHHHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccC
Q 021895 173 VIRFLERHGIP---YHYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 247 (306)
Q Consensus 173 ~~~~A~~~gIp---~~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 247 (306)
+.++++++|++ +++. .+ ...+++.+..+ ++|+||+..+.+ .-.++.++| =.
T Consensus 233 l~~~~~~~~~~~~~~~v~--~g-~~~~~I~~~a~~~~~dLiV~G~~g~--~~~~~~~~G-------------------sv 288 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVK--EG-LPEQVIPQVCEELNAGIVVLGILGR--TGLSAAFLG-------------------NT 288 (319)
T ss_dssp HHHHHHHTTCCGGGEEEE--ES-CHHHHHHHHHHHTTEEEEEEECCSC--CSTHHHHHH-------------------HH
T ss_pred HHHHHHHhCCCcccEEEe--cC-CcHHHHHHHHHHhCCCEEEEeccCc--cCCcccccc-------------------HH
Confidence 34567889986 2322 12 33567888776 899999999988 223344444 23
Q ss_pred CHhHHhhcCCCeeEeCC
Q 021895 248 SGKFLRSYGKDVINIHH 264 (306)
Q Consensus 248 ~~~~l~~~~~~iINiHp 264 (306)
+..+++.-+.+++=++|
T Consensus 289 ~~~vl~~~~~pVLvv~~ 305 (319)
T 3olq_A 289 AEQLIDHIKCDLLAIKP 305 (319)
T ss_dssp HHHHHTTCCSEEEEECC
T ss_pred HHHHHhhCCCCEEEECC
Confidence 45566666666666665
No 109
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=65.14 E-value=32 Score=26.60 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=23.1
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCC
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~ 165 (306)
+++|++|+++|. .-..+++.++... ..+|++++.+.
T Consensus 3 ~~~~vlIiGaG~--~g~~l~~~l~~~~-g~~vvg~~d~~ 38 (141)
T 3nkl_A 3 AKKKVLIYGAGS--AGLQLANMLRQGK-EFHPIAFIDDD 38 (141)
T ss_dssp CCEEEEEECCSH--HHHHHHHHHHHSS-SEEEEEEECSC
T ss_pred CCCEEEEECCCH--HHHHHHHHHHhCC-CcEEEEEEECC
Confidence 467899888875 2234444444332 48999999865
No 110
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=64.63 E-value=9.4 Score=33.02 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=46.9
Q ss_pred CCCceEEEEEeCCc---chHHHHHHhhhc--CCCCeEEE-EEeeC-CCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHH
Q 021895 126 DPKYKVAVLASKQE---HCLVDFLYGWQE--GKLPVEIT-CVISN-HDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (306)
Q Consensus 126 ~~~~riavl~S~~g---~~L~~ll~~~~~--g~l~~~I~-~Visn-~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~ 198 (306)
++++||.|+.+|+- .-.++++..... | +..+|. +-++. +...++..+++.++++||++. ...+.-+ + +.
T Consensus 32 ~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g-~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hrar~lt-~-~d 107 (184)
T 4etn_A 32 RGSMDIIFVCTGNTSRSPMAEALFKSIAEREG-LNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HVSSPLT-E-EL 107 (184)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHHT-CCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CBCCBCC-H-HH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHHHHhcC-CcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hccCcCC-H-HH
Confidence 35689999999985 344455544322 2 234442 22222 222256778999999999987 3322222 2 22
Q ss_pred HHHhcCCcEEEEeccC
Q 021895 199 LELVQNTDFLVLARYM 214 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym 214 (306)
+.+.|+|+...-.
T Consensus 108 ---~~~~DlIltMd~~ 120 (184)
T 4etn_A 108 ---MESADLVLAMTHQ 120 (184)
T ss_dssp ---HHHCSEEEESSHH
T ss_pred ---cCCCCEEEEcCcH
Confidence 2368999987543
No 111
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=64.49 E-value=33 Score=30.85 Aligned_cols=55 Identities=4% Similarity=-0.094 Sum_probs=34.5
Q ss_pred CCCCceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 125 IDPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 125 ~~~~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
..+++||.++..+. || .+..|..++++- .++|+.+.+. ...+..++.|+++..++
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~~~~-------~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYVTAG-------GFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECG-------GGHHHHHHTTCEEEECC
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEEeCH-------HHHHHHHhcCCEEEecc
Confidence 34578999888764 32 334566665543 4787755532 24667788999998876
No 112
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=64.19 E-value=41 Score=31.43 Aligned_cols=55 Identities=20% Similarity=0.445 Sum_probs=37.9
Q ss_pred HHhcCCcEEEEeccCCCCcCch----hhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYMQPVPLQK----EAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
+.++++|+|..-+|-. ... +..+.+ +..-.+..+.++..+.++|=.|| ||++||-
T Consensus 210 eav~~aDvvyt~~w~s---mg~e~~~~~~~~~--------------~~~y~v~~e~l~~a~~~ai~mH~--lPa~Rg~ 268 (307)
T 3tpf_A 210 EALKDKDVVITDTWVS---MGEENEKERKIKE--------------FEGFMIDEKAMSVANKDAILLHC--LPAYRGY 268 (307)
T ss_dssp HHHTTCSEEEECCSSC---TTGGGGHHHHHHH--------------TGGGCBCHHHHHHSCTTCEEEEC--SCCCBTT
T ss_pred HHhcCCCEEEecCccc---CCchhhHHHHHHH--------------hcccccCHHHHHhcCCCcEEECC--CCCCCCc
Confidence 4456899999999833 222 111111 11226899999988889999999 6999984
No 113
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=63.98 E-value=15 Score=30.56 Aligned_cols=84 Identities=15% Similarity=0.138 Sum_probs=49.3
Q ss_pred CCCceEEEEEeCCc---chHHHHHHhhhc--CCC-CeEE-EEEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHH
Q 021895 126 DPKYKVAVLASKQE---HCLVDFLYGWQE--GKL-PVEI-TCVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREE 196 (306)
Q Consensus 126 ~~~~riavl~S~~g---~~L~~ll~~~~~--g~l-~~~I-~~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~ 196 (306)
++++||.|+.+|+- .-.++++..... |-- ..+| .+-++. + ...++..+++.++++||+.. ...+.-+ +
T Consensus 2 ~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~ar~l~-~- 78 (161)
T 2cwd_A 2 DRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HVARRLT-R- 78 (161)
T ss_dssp CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CCCCBCC-H-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-ccccCCC-H-
Confidence 35789999999985 344556555432 310 2344 222222 2 22367788999999999986 4333222 2
Q ss_pred HHHHHhcCCcEEEEeccCC
Q 021895 197 ELLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 197 e~~~~v~~~D~vVlA~ym~ 215 (306)
+ .+.+.|+|+...-.+
T Consensus 79 ~---~~~~~DlIi~M~~~~ 94 (161)
T 2cwd_A 79 E---DVLAYDHILVMDREN 94 (161)
T ss_dssp H---HHHHCSEEEESSHHH
T ss_pred h---HhccCCEEEECChHH
Confidence 1 233789999975533
No 114
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=63.97 E-value=15 Score=35.67 Aligned_cols=71 Identities=8% Similarity=0.176 Sum_probs=39.6
Q ss_pred CCceEEEEEeCC--c---c-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHH
Q 021895 127 PKYKVAVLASKQ--E---H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEEL 198 (306)
Q Consensus 127 ~~~riavl~S~~--g---~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp--~~~~~~k~~~~e~e~ 198 (306)
++.||+|++.+. | . .+.+|. ... + .++|++|.... ...+.++|+++|+| ..+- .. +++
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~-~~~-~--~~~lvav~d~~----~~~a~~~a~~~g~~~~~~~~-----d~-~el 103 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQ-QLS-S--QFQIVALYNPT----LKSSLQTIEQLQLKHATGFD-----SL-ESF 103 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHH-HTT-T--TEEEEEEECSC----HHHHHHHHHHTTCTTCEEES-----CH-HHH
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHH-hcC-C--CeEEEEEEeCC----HHHHHHHHHHcCCCcceeeC-----CH-HHH
Confidence 357999999932 2 2 233332 210 1 37888876643 23567789999997 2231 11 223
Q ss_pred HHHhcCCcEEEEec
Q 021895 199 LELVQNTDFLVLAR 212 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ 212 (306)
++- .++|+|+++-
T Consensus 104 l~~-~~vD~V~I~t 116 (479)
T 2nvw_A 104 AQY-KDIDMIVVSV 116 (479)
T ss_dssp HHC-TTCSEEEECS
T ss_pred hcC-CCCCEEEEcC
Confidence 221 1678888873
No 115
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=63.92 E-value=15 Score=35.77 Aligned_cols=64 Identities=14% Similarity=0.031 Sum_probs=46.1
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhh
Q 021895 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (306)
Q Consensus 40 ~~k~ILTViGpD---RpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elg 114 (306)
..-.+++++|.. +||+.+++-+.|+++|+||.-++|... .-.+.+.|+ .++..++++.+-+.|.
T Consensus 402 ~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~misqgtS----e~~Is~vV~-------~~d~~~Av~aLh~~f~ 468 (473)
T 3c1m_A 402 KDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSS----EVNISFVID-------EKDLLNCVRKLHEKFI 468 (473)
T ss_dssp EEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEEESSC----SSEEEEEEE-------GGGHHHHHHHHHHHHT
T ss_pred CCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEecCCC----CceEEEEEc-------HHHHHHHHHHHHHHHh
Confidence 455789999964 899999999999999999988877432 223344454 2445667776666665
No 116
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=63.53 E-value=18 Score=35.35 Aligned_cols=64 Identities=13% Similarity=0.055 Sum_probs=46.7
Q ss_pred cccEEEEEEcCC---ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhh
Q 021895 40 LTHGIHVFHCPD---EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (306)
Q Consensus 40 ~~k~ILTViGpD---RpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elg 114 (306)
..-.+|+++|.. ++|+.+++-+.|+++|+||.-++|-.. .-.+.+.|+ .++..++++.+-++|-
T Consensus 372 ~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtS----ei~Is~vV~-------~~d~~~Av~aLH~~ff 438 (446)
T 3tvi_A 372 PNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS----EINVIVGVE-------TVDFEKAVKSIYNAFN 438 (446)
T ss_dssp EEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSC----TTEEEEEEE-------GGGHHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCC----CceEEEEEc-------HHHHHHHHHHHHHHHh
Confidence 456799999974 899999999999999999999998432 223344444 2455666766666653
No 117
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=63.49 E-value=8 Score=34.46 Aligned_cols=69 Identities=12% Similarity=0.067 Sum_probs=41.5
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcE
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~ 207 (306)
++||+|++.|.-..- .++..+..- -.+++++|.+.. ...+.++|+++|++. + . .-+++++ ++|+
T Consensus 6 ~~~igiIG~G~~g~~-~~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~~~~~-~-~-----~~~~ll~---~~D~ 69 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQK-AYLPILTKS-ERFEFVGAFTPN----KVKREKICSDYRIMP-F-D-----SIESLAK---KCDC 69 (308)
T ss_dssp CCEEEEECCSHHHHH-HTHHHHTSC-SSSEEEEEECSC----HHHHHHHHHHHTCCB-C-S-----CHHHHHT---TCSE
T ss_pred cCcEEEEecCHHHHH-HHHHHHHhC-CCeEEEEEECCC----HHHHHHHHHHcCCCC-c-C-----CHHHHHh---cCCE
Confidence 579999999863210 122222221 137888877643 235677889999986 3 1 1234444 8999
Q ss_pred EEEec
Q 021895 208 LVLAR 212 (306)
Q Consensus 208 vVlA~ 212 (306)
|+++-
T Consensus 70 V~i~t 74 (308)
T 3uuw_A 70 IFLHS 74 (308)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99874
No 118
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=62.92 E-value=7.7 Score=34.52 Aligned_cols=122 Identities=9% Similarity=0.080 Sum_probs=68.1
Q ss_pred HHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc----------ccceeeecCCCCCce
Q 021895 61 ECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA----------MRSVVRVPDIDPKYK 130 (306)
Q Consensus 61 ~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl----------~~~~~rl~~~~~~~r 130 (306)
+.|.+.|...+.+++-.. ...++-+++|.+|.-+++ +|- ....-+.-..+++.|
T Consensus 23 ~~l~~~g~~~isS~ela~---------------~~gv~~~qiRkDls~fg~-~G~~g~GY~V~~L~~~i~~~Lg~~~~~~ 86 (212)
T 3keo_A 23 KRFNTDGIEKASSKQIAD---------------ALGIDSATVRRDFSYFGE-LGRRGFGYDVKKLMNFFAEILNDHSTTN 86 (212)
T ss_dssp HHHHHTTCCEECHHHHHH---------------HHTSCHHHHHHHHHTTGG-GTTTSSSEEHHHHHHHHHHHTTTTSCEE
T ss_pred HHHHHCCCeEECHHHHHH---------------HHCCCHHHHHHHHHHHhh-cCCCCCCEEHHHHHHHHHHHhCCCCCCE
Confidence 345667777777666422 124567888888876652 220 000011223566789
Q ss_pred EEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--CCcEE
Q 021895 131 VAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFL 208 (306)
Q Consensus 131 iavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~D~v 208 (306)
|++.+.|+ .=++|+......+...+++|++-..++ + -... +.-+|+|++..+ ++.++++ ++|.+
T Consensus 87 V~IvGaG~--lG~aLa~~~~~~~~g~~iVg~~D~dp~-~-kiG~--~~i~GvpV~~~~--------dL~~~v~~~~Id~v 152 (212)
T 3keo_A 87 VMLVGCGN--IGRALLHYRFHDRNKMQISMAFDLDSN-D-LVGK--TTEDGIPVYGIS--------TINDHLIDSDIETA 152 (212)
T ss_dssp EEEECCSH--HHHHHTTCCCCTTSSEEEEEEEECTTS-T-TTTC--BCTTCCBEEEGG--------GHHHHC-CCSCCEE
T ss_pred EEEECcCH--HHHHHHHhhhcccCCeEEEEEEeCCch-h-ccCc--eeECCeEEeCHH--------HHHHHHHHcCCCEE
Confidence 99988875 223444432222346899999975432 0 1111 123689987631 3555665 79999
Q ss_pred EEec
Q 021895 209 VLAR 212 (306)
Q Consensus 209 VlA~ 212 (306)
++|-
T Consensus 153 IIAv 156 (212)
T 3keo_A 153 ILTV 156 (212)
T ss_dssp EECS
T ss_pred EEec
Confidence 9983
No 119
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=62.77 E-value=9.7 Score=33.21 Aligned_cols=68 Identities=13% Similarity=0.090 Sum_probs=42.3
Q ss_pred HHHHHHhCCCC-E--EEeCCCCCChHHHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccC
Q 021895 173 VIRFLERHGIP-Y--HYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMIL 247 (306)
Q Consensus 173 ~~~~A~~~gIp-~--~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 247 (306)
..++++++|++ + ++.. + ...+++.+..+ ++|+||+..+.+ +++...+--=.
T Consensus 204 l~~~~~~~g~~~~~~~v~~--g-~~~~~I~~~a~~~~~dLiVmG~~g~---------------------~~~~~~~~Gsv 259 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIEE--G-PADVLIPRTAQKLDAVVTVIGTVAR---------------------TGLSGALIGNT 259 (290)
T ss_dssp HHHHHHHHTCCTTTEEEEE--S-CHHHHHHHHHHHHTCSEEEEECCSS---------------------CCGGGCCSCHH
T ss_pred HHHHHHHcCCCcceEEEec--c-CHHHHHHHHHHhcCCCEEEECCCCC---------------------cCCcceecchH
Confidence 34467788885 2 2221 2 34567877776 799999998888 33333322223
Q ss_pred CHhHHhhcCCCeeEeCC
Q 021895 248 SGKFLRSYGKDVINIHH 264 (306)
Q Consensus 248 ~~~~l~~~~~~iINiHp 264 (306)
+..+++.-+.+++=++|
T Consensus 260 ~~~vl~~~~~pVLvv~~ 276 (290)
T 3mt0_A 260 AEVVLDTLESDVLVLKP 276 (290)
T ss_dssp HHHHHTTCSSEEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 45667777777777764
No 120
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=62.49 E-value=5.5 Score=36.82 Aligned_cols=71 Identities=13% Similarity=0.090 Sum_probs=37.8
Q ss_pred CCCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcC
Q 021895 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 126 ~~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~ 204 (306)
.+++||+|+++|. |..+...|. +. .+|+.+-.+. .-++.+++ .++...++. ...+++.+++++
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~---~~---~~v~~~~~~~------~~~~~~~~-~~~~~~~d~---~d~~~l~~~~~~ 77 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLK---DE---FDVYIGDVNN------ENLEKVKE-FATPLKVDA---SNFDKLVEVMKE 77 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHT---TT---SEEEEEESCH------HHHHHHTT-TSEEEECCT---TCHHHHHHHHTT
T ss_pred CCccEEEEECCCHHHHHHHHHHh---cC---CCeEEEEcCH------HHHHHHhc-cCCcEEEec---CCHHHHHHHHhC
Confidence 4688999999864 233333332 22 4565432222 12333333 234444432 235678888889
Q ss_pred CcEEEEec
Q 021895 205 TDFLVLAR 212 (306)
Q Consensus 205 ~D~vVlA~ 212 (306)
+|+||.+-
T Consensus 78 ~DvVi~~~ 85 (365)
T 3abi_A 78 FELVIGAL 85 (365)
T ss_dssp CSEEEECC
T ss_pred CCEEEEec
Confidence 99999863
No 121
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=61.83 E-value=16 Score=30.52 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=45.5
Q ss_pred cCCCCCceEEEEEeCCc---chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH
Q 021895 123 PDIDPKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (306)
Q Consensus 123 ~~~~~~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~ 199 (306)
+.+..++||.|+.+|+- .-.++++..+..++ .+|.--=+.....++..+++.++++||+..-...+.- +++.
T Consensus 15 ~~~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~h~ar~l--~~~~- 89 (148)
T 3rh0_A 15 PRGSHMKSVLFVCVGNGGKSQMAAALAQKYASDS--VEIHSAGTKPAQGLNQLSVESIAEVGADMSQGIPKAI--DPEL- 89 (148)
T ss_dssp -----CCEEEEEESSSSSHHHHHHHHHHHHCCTT--SEEEEEESSCCSSCCHHHHHHHHHTTCCCTTCCCCBC--CHHH-
T ss_pred cCcCCCCEEEEECCCchhHHHHHHHHHHHhcCCC--EEEEecccCCCCCCCHHHHHHHHHcCCCcCCCeeeEC--CHHH-
Confidence 34455789999999985 34556666554443 3432221222223677889999999998642211211 1222
Q ss_pred HHhcCCcEEEEe
Q 021895 200 ELVQNTDFLVLA 211 (306)
Q Consensus 200 ~~v~~~D~vVlA 211 (306)
+.+.|+|+..
T Consensus 90 --~~~~DlIitM 99 (148)
T 3rh0_A 90 --LRTVDRVVIL 99 (148)
T ss_dssp --HHHCSEEEEE
T ss_pred --hcCCCEEEEe
Confidence 2378999987
No 122
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=61.78 E-value=36 Score=24.77 Aligned_cols=72 Identities=15% Similarity=0.259 Sum_probs=39.6
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|. |..+...|. +.| ..+|+++--+. .-.+.+...++.+...+. ..++++.+.++++|
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~--~~g--~~~v~~~~r~~------~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~d 71 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLK--TSS--NYSVTVADHDL------AALAVLNRMGVATKQVDA---KDEAGLAKALGGFD 71 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHH--HCS--SEEEEEEESCH------HHHHHHHTTTCEEEECCT---TCHHHHHHHTTTCS
T ss_pred cCeEEEECCCHHHHHHHHHHH--hCC--CceEEEEeCCH------HHHHHHHhCCCcEEEecC---CCHHHHHHHHcCCC
Confidence 46888887743 233322222 233 25665443222 123344466777666542 12456767777999
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+||.+-
T Consensus 72 ~vi~~~ 77 (118)
T 3ic5_A 72 AVISAA 77 (118)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999875
No 123
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=61.73 E-value=24 Score=33.76 Aligned_cols=63 Identities=14% Similarity=0.116 Sum_probs=45.4
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc
Q 021895 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (306)
Q Consensus 40 ~~k~ILTViGp---DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl 115 (306)
.+-.+++++|. +++|+.+++-+.|+++|+||.-++. . + -.+.+.|+ .++..++++.+-+.|.+
T Consensus 342 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~--S--e--~~is~vV~-------~~d~~~Av~~Lh~~f~~ 407 (421)
T 3ab4_A 342 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIST--S--E--IRISVLIR-------EDDLDAAARALHEQFQL 407 (421)
T ss_dssp CCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEE--E--T--TEEEEEEE-------GGGHHHHHHHHHHHTTC
T ss_pred CCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEEc--C--C--CeEEEEEe-------HHHHHHHHHHHHHHHhc
Confidence 45578999996 7999999999999999999986653 1 1 12334443 34567777777777763
No 124
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=61.07 E-value=15 Score=37.69 Aligned_cols=134 Identities=16% Similarity=0.279 Sum_probs=69.8
Q ss_pred CCCCCceEEEEEeCCc-chHHHHHHhhh--cCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHH
Q 021895 124 DIDPKYKVAVLASKQE-HCLVDFLYGWQ--EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE 200 (306)
Q Consensus 124 ~~~~~~riavl~S~~g-~~L~~ll~~~~--~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~ 200 (306)
..+++.||+++.+.-. |...-++..+- -.+-..||.|--.++++ ......+.+...--++-+. .-..++++++
T Consensus 233 ~~~~klrIGyvS~df~~H~v~~~~~~~~~~~d~~~fei~~y~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~d~~~a~ 308 (723)
T 4gyw_A 233 LSDGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDD--GTNFRVKVMAEANHFIDLS--QIPCNGKAAD 308 (723)
T ss_dssp TTTTCEEEEEEESCSSSSHHHHHHTTHHHHSCTTTEEEEEEESSCCC--SCHHHHHHHHHSSEEEEGG--GCCCHHHHHH
T ss_pred cccccceeeeechhhccCcHHHHHHHHHHHhccCceeEEEEEcCCCC--ccHHHHHHHHhhccccccc--cCCcHHHHHH
Confidence 3456889998877643 54444433221 12234899877666543 2233333333321122222 1113557777
Q ss_pred Hhc--CCcEEE-EeccC----------CCCcCchhhhhhhhhhhhhccCC-Cccccc---cccCCHhHHhhcCCCeeEeC
Q 021895 201 LVQ--NTDFLV-LARYM----------QPVPLQKEAYLGYKLLESLSSKG-SLTSYF---NMILSGKFLRSYGKDVINIH 263 (306)
Q Consensus 201 ~v~--~~D~vV-lA~ym----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~il~~~~l~~~~~~iINiH 263 (306)
+++ +.|++| |.||+ ||-|+|- .||||- .+ -| ..-||+ ..+.++..-+.|..++|-+-
T Consensus 309 ~i~~d~iDIlidl~g~t~~~r~~i~a~r~APvQv-~~lG~p--~T---tG~~~iDY~i~D~~~~P~~~~~~ysEklirLP 382 (723)
T 4gyw_A 309 RIHQDGIHILVNMNGYTKGARNELFALRPAPIQA-MWLGYP--GT---SGALFMDYIITDQETSPAEVAEQYSEKLAYMP 382 (723)
T ss_dssp HHHHTTCSEEEESCSSBTTCCTHHHHTCCSSEEE-ECSSCS--SC---CCCTTCCEEEECTTTSCGGGGGGCSSEEEECS
T ss_pred HHHhccceeEEeccCCCCCCcchhhhcCCCCcee-eeccCC--CC---CCCCcCCEEEeCCCCCCchhhhcceeeeeeCC
Confidence 776 899988 78886 5677775 466762 11 11 111222 12345555566666666665
Q ss_pred CCCC
Q 021895 264 HGLL 267 (306)
Q Consensus 264 psLL 267 (306)
++++
T Consensus 383 ~~~~ 386 (723)
T 4gyw_A 383 HTFF 386 (723)
T ss_dssp SCSC
T ss_pred Cccc
Confidence 5543
No 125
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=61.05 E-value=37 Score=31.72 Aligned_cols=108 Identities=17% Similarity=0.185 Sum_probs=61.8
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCC-CChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
..||++++-+. +.....++.++ .++++++. ++.++.. ++..+.+.|++.|..+.+... +.+.++++
T Consensus 155 gl~va~vGD~~~~rva~Sl~~~~--~~~G~~v~--~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~a 222 (308)
T 1ml4_A 155 GLKIGLLGDLKYGRTVHSLAEAL--TFYDVELY--LISPELLRMPRHIVEELREKGMKVVETTT--------LEDVIGKL 222 (308)
T ss_dssp SEEEEEESCTTTCHHHHHHHHHG--GGSCEEEE--EECCGGGCCCHHHHHHHHHTTCCEEEESC--------THHHHTTC
T ss_pred CeEEEEeCCCCcCchHHHHHHHH--HHCCCEEE--EECCccccCCHHHHHHHHHcCCeEEEEcC--------HHHHhcCC
Confidence 35777776653 23444455443 23445543 3333221 344567777788877655431 22456799
Q ss_pred cEEEEeccCCCCcCchhhhhhhhhhhhhccCCCcccc----ccccCCHhHHhhcCCCeeEeCCC
Q 021895 206 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY----FNMILSGKFLRSYGKDVINIHHG 265 (306)
Q Consensus 206 D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~il~~~~l~~~~~~iINiHps 265 (306)
|+|..-+| |+|+|= +..+| ..--+..+.++..+.++|=.||.
T Consensus 223 Dvvyt~~~------q~er~~------------~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 223 DVLYVTRI------QKERFP------------DEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp SEEEECCC------CGGGSS------------SHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred CEEEECCc------cccccC------------CHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 99999887 355531 11111 11257888888888889999973
No 126
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=60.27 E-value=22 Score=28.97 Aligned_cols=84 Identities=11% Similarity=0.075 Sum_probs=51.8
Q ss_pred CCceEEEEEeCCc---chHHHHHHhhhcCCCCeEEEEEeeCC-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh
Q 021895 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (306)
Q Consensus 127 ~~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~~Visn~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v 202 (306)
.++||.|+.+|+- .-.++++.....+++.+.=+++-..| ...++..+++.++++||+......+.-+ ++ .+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr~l~-~~----~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQIT-KA----DF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCCCCC-SH----HH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeeccCC-Hh----Hh
Confidence 4568999999984 56677777766554433333333312 2236778899999999987533222211 11 23
Q ss_pred cCCcEEEEeccCC
Q 021895 203 QNTDFLVLARYMQ 215 (306)
Q Consensus 203 ~~~D~vVlA~ym~ 215 (306)
.+.|+|+...-.+
T Consensus 78 ~~~DlIi~m~~~~ 90 (146)
T 1p8a_A 78 SKFDVIAALDQSI 90 (146)
T ss_dssp HSCSEEEESSHHH
T ss_pred hcCCEEEEeChHH
Confidence 4899999976543
No 127
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=60.21 E-value=20 Score=29.00 Aligned_cols=75 Identities=13% Similarity=0.240 Sum_probs=45.5
Q ss_pred CceEEEEEeCCc---chHHHHHHhhhcCCCCeEE-EEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEI-TCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I-~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
++||.|+.+|+. .-.++++.....+ ..+| .+-++.+ +++..+++.++++||++.....+.-+ + + .++
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~--~~~v~SAGt~~~--~~~p~a~~~l~~~Gid~s~~~sr~l~-~-~---~~~ 73 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGD--EWKVYSAGIEAH--GLNPNAVKAMKEVGIDISNQTSDIID-S-D---ILN 73 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCT--TEEEEEEESSCC--CCCHHHHHHHHHTTCCCTTCCCCBCC-H-H---HHT
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCC--CEEEEcCcCCCC--CCCHHHHHHHHHcCCCcccCccCcCC-H-H---Hhh
Confidence 358999999985 4455666655332 2444 2233333 36778899999999987432222111 2 1 235
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
+.|+|+..
T Consensus 74 ~~D~Ii~m 81 (139)
T 1jl3_A 74 NADLVVTL 81 (139)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEe
Confidence 89999986
No 128
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=59.30 E-value=12 Score=28.87 Aligned_cols=87 Identities=10% Similarity=0.061 Sum_probs=46.0
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcC-CCCeEEEEEeeCCCCCC------------------------ChhHHHHHHhCCC
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEG-KLPVEITCVISNHDRGP------------------------NSHVIRFLERHGI 182 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g-~l~~~I~~Visn~~~~~------------------------~~~~~~~A~~~gI 182 (306)
.+||.|-+.++.+...++-++..-- ...++++++-...+... .....++++++|+
T Consensus 6 ~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 85 (150)
T 3tnj_A 6 YHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIPMPDTPYGTAIPLDTETTYDAMLDVEKQKLSQIGNTLGI 85 (150)
T ss_dssp CSEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC--------CTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEcCccccccccccccCcCHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4689988888876655554433211 12355554433221100 0123455677788
Q ss_pred CE-EEeCCCCCChHHHHHHHhc--CCcEEEEeccCC
Q 021895 183 PY-HYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 183 p~-~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
+. ...-. .....+++.+..+ ++|+||+....+
T Consensus 86 ~~~~~~~~-~g~~~~~I~~~a~~~~~dliV~G~~~~ 120 (150)
T 3tnj_A 86 DPAHRWLV-WGEPREEIIRIAEQENVDLIVVGSHGR 120 (150)
T ss_dssp CGGGEEEE-ESCHHHHHHHHHHHTTCSEEEEEEC--
T ss_pred CcceEEEe-cCCHHHHHHHHHHHcCCCEEEEecCCC
Confidence 73 11111 1233467888877 899999987766
No 129
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=58.53 E-value=13 Score=33.95 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=41.9
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
+++||+|++.|.-. ...+..+..-. .+++++|.... ...+.++|+++|++. + .. -+++++. .++|
T Consensus 4 ~~~~vgiiG~G~~g--~~~~~~l~~~~-~~~lvav~d~~----~~~~~~~~~~~g~~~-~-----~~-~~~~l~~-~~~D 68 (354)
T 3db2_A 4 NPVGVAAIGLGRWA--YVMADAYTKSE-KLKLVTCYSRT----EDKREKFGKRYNCAG-D-----AT-MEALLAR-EDVE 68 (354)
T ss_dssp CCEEEEEECCSHHH--HHHHHHHTTCS-SEEEEEEECSS----HHHHHHHHHHHTCCC-C-----SS-HHHHHHC-SSCC
T ss_pred CcceEEEEccCHHH--HHHHHHHHhCC-CcEEEEEECCC----HHHHHHHHHHcCCCC-c-----CC-HHHHhcC-CCCC
Confidence 46799999998621 22333333211 47888876543 235677888899875 2 11 2233320 2789
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++-
T Consensus 69 ~V~i~t 74 (354)
T 3db2_A 69 MVIITV 74 (354)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 999874
No 130
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=58.44 E-value=42 Score=31.82 Aligned_cols=51 Identities=25% Similarity=0.430 Sum_probs=34.7
Q ss_pred HHhcCCcEEEEeccCC---CCcCchhh---hhhhhhhhhhccCCCccccccccCCHhHHhhc-CCCeeEeCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYMQ---PVPLQKEA---YLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSF 270 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~-~~~iINiHpsLLP~f 270 (306)
+.++++|+|..-+|-+ +-..+.|| |-+| -+..+.++.. +.++|=.|| ||++
T Consensus 220 eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y------------------~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (335)
T 1dxh_A 220 EAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPY------------------QVNMEIMKATGNPRAKFMHC--LPAF 277 (335)
T ss_dssp HHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGG------------------CBCHHHHHTTCCSSCEEEEC--SCCC
T ss_pred HHhCCCCEEEeCCccccCccchhhHHHHHHhhcc------------------eeCHHHHHhccCCCeEEECC--CCCC
Confidence 4566899999988933 11112332 1122 5888899888 778999999 7998
No 131
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=58.39 E-value=11 Score=32.14 Aligned_cols=66 Identities=11% Similarity=0.152 Sum_probs=39.1
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|. |..+...|.. .| .+|+++ .+++ ...+.++++++|+....- ..+ .++++|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g---~~V~~v-~~r~---~~~~~~l~~~~g~~~~~~------~~~----~~~~aD 83 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQ---IPAIIA-NSRG---PASLSSVTDRFGASVKAV------ELK----DALQAD 83 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TT---CCEEEE-CTTC---GGGGHHHHHHHTTTEEEC------CHH----HHTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CEEEEE-ECCC---HHHHHHHHHHhCCCcccC------hHH----HHhcCC
Confidence 57999999886 3444333322 23 466543 4442 234667778888765431 121 246899
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|++|=
T Consensus 84 vVilav 89 (220)
T 4huj_A 84 VVILAV 89 (220)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999984
No 132
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=58.35 E-value=30 Score=26.20 Aligned_cols=59 Identities=17% Similarity=0.075 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEee
Q 021895 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (306)
Q Consensus 101 eLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Vis 163 (306)
-+|.-...+|.++|+..|..+. .+- +|-+.+.|+...+.++++.+++|.-.+.|.-|-.
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~--~dG--~Vei~~eG~~~~i~~f~~~l~~gP~~a~V~~v~~ 74 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENL--PDG--RVEVVAEGPKEALELFLHHLKQGPRLARVEAVEV 74 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEEC--TTS--CEEEEEESCHHHHHHHHHHHHHCSTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCeEEEEEC--CCC--cEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 4677888889999987764333 222 6888999988889999998887743477876643
No 133
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=57.78 E-value=47 Score=30.96 Aligned_cols=122 Identities=15% Similarity=0.116 Sum_probs=69.2
Q ss_pred EeCCcchHHHHHHhh----hcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHH------------
Q 021895 135 ASKQEHCLVDFLYGW----QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEEL------------ 198 (306)
Q Consensus 135 ~S~~g~~L~~ll~~~----~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~------------ 198 (306)
.+...|..|+|+|-. ..|.+..--++.|.+..+ -....+..+.+.|+.+.+++.++-...+++
T Consensus 129 ~~~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~~r-va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~ 207 (301)
T 2ef0_A 129 LSDRAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNN-VLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDP 207 (301)
T ss_dssp ECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCH-HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCH
T ss_pred CCCccCchHHHHHHHHHHHHhCCcCCcEEEEECCCch-hHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCH
Confidence 344568778877653 236665223344444311 112345556677999888876543222222
Q ss_pred HHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCcccc-ccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY-FNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+.++++|+|..-+|-+ .. +.+.+..+ ..| ..--++.+.++..+.++|=.|| ||++||-
T Consensus 208 ~eav~~aDvvy~~~~~s-mg-~~~~~~~~------------~~~~~~y~v~~e~l~~a~~~ai~mHp--lP~~Rg~ 267 (301)
T 2ef0_A 208 KEAALGAHALYTDVWTS-MG-QEAEREKR------------LRDFQGFQVNGELLKLLRPEGVFLHC--LPAHYGE 267 (301)
T ss_dssp HHHHTTCSEEEECCCC----------CHH------------HHHTTTCCBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred HHHhcCCCEEEecCccc-CC-cccchhHH------------HHHhhccccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 34556899999989844 00 00000000 011 1225888999888889999998 7999984
No 134
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=57.77 E-value=33 Score=28.45 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=47.2
Q ss_pred CCceEEEEEeCCc---chHHHHHHhhh-cCCCC--eEE-EEEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 021895 127 PKYKVAVLASKQE---HCLVDFLYGWQ-EGKLP--VEI-TCVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (306)
Q Consensus 127 ~~~riavl~S~~g---~~L~~ll~~~~-~g~l~--~~I-~~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e 197 (306)
+++||.|+.+|+- .-.++++...- +-.++ .+| .+-++. | ...++..+++.++++||++. ...+.-+ +
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~-~-- 78 (163)
T 1u2p_A 3 DPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVG-T-- 78 (163)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCC-H--
T ss_pred CCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECC-h--
Confidence 4679999999985 34455555542 11122 444 222222 2 22367788999999999986 3322222 1
Q ss_pred HHHHhcCCcEEEEeccCC
Q 021895 198 LLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 198 ~~~~v~~~D~vVlA~ym~ 215 (306)
+.+.+ |+|+...-.+
T Consensus 79 --~~~~~-DlIi~Md~~~ 93 (163)
T 1u2p_A 79 --EHLAA-DLLVALDRNH 93 (163)
T ss_dssp --HHHTS-SEEEESSHHH
T ss_pred --hhccC-CEEEEeCHHH
Confidence 12358 9999875443
No 135
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=57.73 E-value=32 Score=31.35 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=40.6
Q ss_pred CCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHHHHhc
Q 021895 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp--~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+++||+|++.|.-. ..++..+..- -.+++++|.+.. ...+.++|+++|+| ..... . -++ ++.
T Consensus 4 ~~~~~vgiiG~G~ig--~~~~~~l~~~-~~~~lv~v~d~~----~~~~~~~a~~~~~~~~~~~~~----~-~~~---ll~ 68 (362)
T 1ydw_A 4 ETQIRIGVMGCADIA--RKVSRAIHLA-PNATISGVASRS----LEKAKAFATANNYPESTKIHG----S-YES---LLE 68 (362)
T ss_dssp --CEEEEEESCCTTH--HHHHHHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCCTTCEEES----S-HHH---HHH
T ss_pred CCceEEEEECchHHH--HHHHHHHhhC-CCcEEEEEEcCC----HHHHHHHHHHhCCCCCCeeeC----C-HHH---Hhc
Confidence 356899999998732 1222232221 037888877643 23467789999974 12211 1 123 333
Q ss_pred --CCcEEEEec
Q 021895 204 --NTDFLVLAR 212 (306)
Q Consensus 204 --~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 69 ~~~~D~V~i~t 79 (362)
T 1ydw_A 69 DPEIDALYVPL 79 (362)
T ss_dssp CTTCCEEEECC
T ss_pred CCCCCEEEEcC
Confidence 689999874
No 136
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=57.54 E-value=15 Score=35.62 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=43.2
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC-C-----ChhHHHHHHhCCCCEEEeC
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-P-----NSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~-----~~~~~~~A~~~gIp~~~~~ 188 (306)
+..||+|..||.- .+|-.+|..++. +.+.++.+|..||.-. + ...+.++|+++|||+++..
T Consensus 17 ~~~~vlVa~SGG~DS~~Ll~ll~~~~~-~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~ 85 (464)
T 3a2k_A 17 EGAAVIVGVSGGPDSLALLHVFLSLRD-EWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQ 85 (464)
T ss_dssp CSSBEEEECCSSHHHHHHHHHHHHHHH-TTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEcCcHHHHHHHHHHHHHHH-HcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEE
Confidence 3458999999964 566666665542 2356788888887431 1 1367889999999999876
No 137
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=57.46 E-value=55 Score=26.26 Aligned_cols=62 Identities=11% Similarity=-0.022 Sum_probs=45.4
Q ss_pred cEEEEEEcCCccchHHHHHHHHHhc---CCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCCHHHHHHHHHHHHh
Q 021895 42 HGIHVFHCPDEVGIVAKLSECIASR---GGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSK 111 (306)
Q Consensus 42 k~ILTViGpDRpGIVAaVS~~LAe~---G~NIlD~sQ~id~l~G~Ff-MrmeVdv~~~~~~~eeLreaL~~la~ 111 (306)
.|-+.|+|++..+.+++|-.++.++ +..+ ..+. .-.|.|. ..+.+.+ .+.+++.+-.+++.+
T Consensus 36 ~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~---Ss~GkY~Svtv~v~v----~S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 36 PFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKP---SSKGNYHSVSITINA----THIEQVETLYEELGK 101 (109)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEE---SSCSSEEEEEEEECC----SSHHHHHHHHHHHSC
T ss_pred CceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecC---CCCCeEEEEEEEEEE----CCHHHHHHHHHHHhc
Confidence 5889999999999999999999888 6666 3333 4467776 4444443 367888887777653
No 138
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=57.28 E-value=20 Score=32.49 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=41.9
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcE
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~ 207 (306)
++||+|++.|.-. ..++..+..- -.+++++|.... ...+.++++++|++..+- . -+++++. .++|+
T Consensus 2 ~~rvgiIG~G~~g--~~~~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~~~~~-----~-~~~ll~~-~~~D~ 67 (344)
T 3ezy_A 2 SLRIGVIGLGRIG--TIHAENLKMI-DDAILYAISDVR----EDRLREMKEKLGVEKAYK-----D-PHELIED-PNVDA 67 (344)
T ss_dssp CEEEEEECCSHHH--HHHHHHGGGS-TTEEEEEEECSC----HHHHHHHHHHHTCSEEES-----S-HHHHHHC-TTCCE
T ss_pred eeEEEEEcCCHHH--HHHHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHhCCCceeC-----C-HHHHhcC-CCCCE
Confidence 4699999997621 1233333321 137888876543 235677889999975441 1 2233321 17899
Q ss_pred EEEec
Q 021895 208 LVLAR 212 (306)
Q Consensus 208 vVlA~ 212 (306)
|+++-
T Consensus 68 V~i~t 72 (344)
T 3ezy_A 68 VLVCS 72 (344)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99874
No 139
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=56.93 E-value=63 Score=24.87 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=52.1
Q ss_pred eEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcEE
Q 021895 130 KVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFL 208 (306)
Q Consensus 130 riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~v 208 (306)
+|.+++.-. ..++..+++++..=+-..++..+|.-... ......+.++++|+.++. . .-..+++.++++++|++
T Consensus 4 ~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~~~~~~~~~~~~v~~-g---~~~~~~~~~~~~~adv~ 78 (166)
T 3qhp_A 4 KIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP-DEKKIKLLAQKLGVKAEF-G---FVNSNELLEILKTCTLY 78 (166)
T ss_dssp EEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST-THHHHHHHHHHHTCEEEC-C---CCCHHHHHHHHTTCSEE
T ss_pred EEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc-cHHHHHHHHHHcCCeEEE-e---ecCHHHHHHHHHhCCEE
Confidence 344444332 25677777776542111244445443311 235677888999984444 3 11246788888999999
Q ss_pred EEeccCCCCcCchhhhhhhhhhhhhc
Q 021895 209 VLARYMQPVPLQKEAYLGYKLLESLS 234 (306)
Q Consensus 209 VlA~ym~~~~~~~~~~~~~~~~~~~~ 234 (306)
|+....- . .|.++.|.++
T Consensus 79 v~ps~~e-------~-~~~~~~Eama 96 (166)
T 3qhp_A 79 VHAANVE-------S-EAIACLEAIS 96 (166)
T ss_dssp EECCCSC-------C-CCHHHHHHHH
T ss_pred EECCccc-------C-ccHHHHHHHh
Confidence 9866543 2 2456666653
No 140
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=56.64 E-value=14 Score=33.19 Aligned_cols=68 Identities=7% Similarity=0.061 Sum_probs=40.5
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|. |... +..+..- -.+++++|.... ...+.++|+++|++ + . . -+++++. .++|
T Consensus 3 ~~~vgiiG~G~~g~~~---~~~l~~~-~~~~l~av~d~~----~~~~~~~~~~~~~~--~-~----~-~~~~l~~-~~~D 65 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVH---AKAVSGN-ADARLVAVADAF----PAAAEAIAGAYGCE--V-R----T-IDAIEAA-ADID 65 (331)
T ss_dssp CEEEEEECCSHHHHHH---HHHHHHC-TTEEEEEEECSS----HHHHHHHHHHTTCE--E-C----C-HHHHHHC-TTCC
T ss_pred ceEEEEECCCHHHHHH---HHHHhhC-CCcEEEEEECCC----HHHHHHHHHHhCCC--c-C----C-HHHHhcC-CCCC
Confidence 57999999986 3322 2222221 137888876543 23567889999998 3 1 1 2233321 1789
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++-
T Consensus 66 ~V~i~t 71 (331)
T 4hkt_A 66 AVVICT 71 (331)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 999875
No 141
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=55.90 E-value=25 Score=31.67 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=40.2
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~-- 203 (306)
+++||+|++.|. |.. .+..+..- -.+++++|.... ...+.++|+++|++++ . . +.+++.
T Consensus 3 ~~~rvgiiG~G~~g~~---~~~~l~~~-~~~~l~av~d~~----~~~~~~~a~~~g~~~~--~----~----~~~~l~~~ 64 (344)
T 3euw_A 3 LTLRIALFGAGRIGHV---HAANIAAN-PDLELVVIADPF----IEGAQRLAEANGAEAV--A----S----PDEVFARD 64 (344)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECSS----HHHHHHHHHTTTCEEE--S----S----HHHHTTCS
T ss_pred CceEEEEECCcHHHHH---HHHHHHhC-CCcEEEEEECCC----HHHHHHHHHHcCCcee--C----C----HHHHhcCC
Confidence 367999999976 322 22222221 137888876543 2346777888885432 1 1 223454
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 65 ~~D~V~i~t 73 (344)
T 3euw_A 65 DIDGIVIGS 73 (344)
T ss_dssp CCCEEEECS
T ss_pred CCCEEEEeC
Confidence 789999875
No 142
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=55.61 E-value=53 Score=31.10 Aligned_cols=54 Identities=19% Similarity=0.294 Sum_probs=34.8
Q ss_pred HHhcCCcEEEEeccCC---CCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhc-CCCeeEeCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYMQ---PVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSY-GKDVINIHHGLLPSF 270 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~-~~~iINiHpsLLP~f 270 (306)
+.++++|+|..-+|-+ +-..+.|+ .. ....--+..+.++.. +.++|=.|| ||++
T Consensus 220 eav~~aDvvytd~w~smg~~~~~~~er-~~--------------~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (333)
T 1duv_G 220 KGVEGADFIYTDVWVSMGEAKEKWAER-IA--------------LLREYQVNSKMMQLTGNPEVKFLHC--LPAF 277 (333)
T ss_dssp HHHTTCSEEEECCSSCTTSCTTHHHHH-HH--------------HHGGGCBCHHHHHTTCCTTCEEEEC--SCCC
T ss_pred HHhCCCCEEEeCCccccCccccchHHH-HH--------------HhhccccCHHHHHhccCCCcEEECC--CCCC
Confidence 4567899999989933 11112222 00 001125888999888 778999999 7998
No 143
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=55.55 E-value=72 Score=27.85 Aligned_cols=82 Identities=13% Similarity=0.194 Sum_probs=41.7
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCC-eEEEEEeeCCCCCCChhHHHHHHhCCCCE-EEeCC--CCCCh-H----
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCA--KENER-E---- 195 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~-~~I~~Visn~~~~~~~~~~~~A~~~gIp~-~~~~~--k~~~~-e---- 195 (306)
+++||++++...+ .....++..+++. -. .++..+++... .....+..+.+|++. +.+.. ..... .
T Consensus 7 ~~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQH---RQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTR 82 (375)
T ss_dssp SCEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSS---SHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHH
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCC---HHHHHHHHHHcCCCCccccccCCCcccHHHHHHH
Confidence 4689998874432 2344566665442 12 56666665431 122233345577765 33321 11111 1
Q ss_pred --HHHHHHhc--CCcEEEEec
Q 021895 196 --EELLELVQ--NTDFLVLAR 212 (306)
Q Consensus 196 --~e~~~~v~--~~D~vVlA~ 212 (306)
..+.+.++ ++|+|++-+
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~ 103 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHG 103 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEEeC
Confidence 23555554 899999954
No 144
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.83 E-value=15 Score=28.45 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=38.6
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh--cC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV--QN 204 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v--~~ 204 (306)
+++|+|++.|. |..+...|.. .| .+|+++-.|. ...+.+++.|+.+.+.+. . +++.++.. .+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g---~~V~~id~~~------~~~~~~~~~~~~~~~gd~---~-~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AG---KKVLAVDKSK------EKIELLEDEGFDAVIADP---T-DESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEESCH------HHHHHHHHTTCEEEECCT---T-CHHHHHHSCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CC---CeEEEEECCH------HHHHHHHHCCCcEEECCC---C-CHHHHHhCCccc
Confidence 45799988765 3444443432 23 5666554332 235566677877666432 1 23344433 38
Q ss_pred CcEEEEe
Q 021895 205 TDFLVLA 211 (306)
Q Consensus 205 ~D~vVlA 211 (306)
+|++|++
T Consensus 71 ~d~vi~~ 77 (141)
T 3llv_A 71 VSAVLIT 77 (141)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9998875
No 145
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=54.55 E-value=12 Score=35.77 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=31.9
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
+.+|+|++-|. |..+...|.. .| .++++|=.|. ...+.+++.|+++.+-+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g---~~vvvId~d~------~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SG---VKMVVLDHDP------DHIETLRKFGMKVFYGD 54 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCH------HHHHHHHHTTCCCEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCH------HHHHHHHhCCCeEEEcC
Confidence 45788888876 4555555543 23 5666555444 24567778899887755
No 146
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=54.27 E-value=74 Score=28.49 Aligned_cols=54 Identities=17% Similarity=0.295 Sum_probs=33.7
Q ss_pred CCCceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 126 DPKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 126 ~~~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
..+|||+++..+. || .+..|..++++- .++|+.+.. . ...+..+..|+++..+.
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v~~~-~------~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLVAAS-E------NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEEE-G------GGHHHHHHTTCCEEEEE
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEEEcC-H------HHHHHHHhCCCeeEecC
Confidence 3468999886554 32 344566666543 378865543 2 14577888999998875
No 147
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=54.22 E-value=11 Score=30.16 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=39.0
Q ss_pred ecCCCCCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHH-hCCCCEEEeCCCCCChHHHHH
Q 021895 122 VPDIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE-RHGIPYHYLCAKENEREEELL 199 (306)
Q Consensus 122 l~~~~~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~-~~gIp~~~~~~k~~~~e~e~~ 199 (306)
++...+.++|+|++.|. |..+...|.. .| .+|+++-.|.++ .+.++ +.|+.+...+. ...+.+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~--~g---~~V~vid~~~~~------~~~~~~~~g~~~~~~d~---~~~~~l~ 78 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASS--SG---HSVVVVDKNEYA------FHRLNSEFSGFTVVGDA---AEFETLK 78 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCGGG------GGGSCTTCCSEEEESCT---TSHHHHH
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCHHH------HHHHHhcCCCcEEEecC---CCHHHHH
Confidence 44555678999998776 3444444432 33 577655444321 23334 56765544221 1123333
Q ss_pred HH-hcCCcEEEEec
Q 021895 200 EL-VQNTDFLVLAR 212 (306)
Q Consensus 200 ~~-v~~~D~vVlA~ 212 (306)
+. +.++|+||.+-
T Consensus 79 ~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 79 ECGMEKADMVFAFT 92 (155)
T ss_dssp TTTGGGCSEEEECS
T ss_pred HcCcccCCEEEEEe
Confidence 32 45899999873
No 148
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=53.76 E-value=27 Score=31.32 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=35.2
Q ss_pred CCCCceEEEEEeCCc-c--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCC
Q 021895 125 IDPKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 125 ~~~~~riavl~S~~g-~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~ 189 (306)
...++||.+++.+.+ | .+.+|..++++- .++|+.+.... ..+..++.|+++..++.
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~~~~~-------~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFATGEG-------FAGTLRKLGFEPVATGM 75 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHHTTCEEEECCC
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEEccHH-------HHHHHHhcCCceeecCc
Confidence 345789998876653 2 233566665543 47877554421 36677889999988763
No 149
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.41 E-value=17 Score=29.49 Aligned_cols=70 Identities=13% Similarity=0.022 Sum_probs=39.8
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhc-CCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH--hc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--VQ 203 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~-g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~--v~ 203 (306)
..+|+|++.|. |..+...|.. . | ++|+++-.|. .-.+.+++.|+.+.+.+. ..++.+.+. +.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g---~~V~vid~~~------~~~~~~~~~g~~~~~gd~---~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYG---KISLGIEIRE------EAAQQHRSEGRNVISGDA---TDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHC---SCEEEEESCH------HHHHHHHHTTCCEEECCT---TCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccC---CeEEEEECCH------HHHHHHHHCCCCEEEcCC---CCHHHHHhccCCC
Confidence 56899998765 4455444433 3 4 4565543332 234556778988766432 123333333 45
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
++|++|++
T Consensus 105 ~ad~vi~~ 112 (183)
T 3c85_A 105 HVKLVLLA 112 (183)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEe
Confidence 89999985
No 150
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=51.82 E-value=35 Score=28.27 Aligned_cols=83 Identities=19% Similarity=0.244 Sum_probs=48.3
Q ss_pred CCceEEEEEeCCc---chHHHHHHhhhc-CCCC---eEE-EEEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHH
Q 021895 127 PKYKVAVLASKQE---HCLVDFLYGWQE-GKLP---VEI-TCVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREE 196 (306)
Q Consensus 127 ~~~riavl~S~~g---~~L~~ll~~~~~-g~l~---~~I-~~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~ 196 (306)
+++||.|+.+|+- .-.++++..... -.+. .+| .+-++. | ...++..+++.++++||+.. ...+.-+.+
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~~ar~l~~~- 83 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-HKGKQIKTK- 83 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-CCBCBCCGG-
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-ceEeECCHH-
Confidence 4679999999985 344555555432 1222 344 222222 2 22367788999999999986 332221211
Q ss_pred HHHHHhcCCcEEEEeccCC
Q 021895 197 ELLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 197 e~~~~v~~~D~vVlA~ym~ 215 (306)
.+.+.|+|+...-.+
T Consensus 84 ----~~~~~DlIl~M~~~~ 98 (161)
T 1d1q_A 84 ----HFDEYDYIIGMDESN 98 (161)
T ss_dssp ----GGGTCSEEEESSHHH
T ss_pred ----HHhhCCEEEEeCHHH
Confidence 244899999875533
No 151
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=51.48 E-value=18 Score=32.35 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=37.6
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCC-eEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~-~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
++||+|++.|. |..+..-|.. .| .+ .+|+ +++++ .....+.++++|+.+.. . ..+.++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~--~g-~~~~~V~--v~dr~---~~~~~~l~~~~gi~~~~------~----~~~~~~~a 64 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA--NG-YDPNRIC--VTNRS---LDKLDFFKEKCGVHTTQ------D----NRQGALNA 64 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH--TT-CCGGGEE--EECSS---SHHHHHHHHTTCCEEES------C----HHHHHSSC
T ss_pred CCEEEEEcccHHHHHHHHHHHH--CC-CCCCeEE--EEeCC---HHHHHHHHHHcCCEEeC------C----hHHHHhcC
Confidence 46899999886 3333322221 33 32 3554 44552 34455666667874321 1 22345689
Q ss_pred cEEEEec
Q 021895 206 DFLVLAR 212 (306)
Q Consensus 206 D~vVlA~ 212 (306)
|+|++|=
T Consensus 65 DvVilav 71 (280)
T 3tri_A 65 DVVVLAV 71 (280)
T ss_dssp SEEEECS
T ss_pred CeEEEEe
Confidence 9999985
No 152
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=51.45 E-value=14 Score=31.05 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=35.1
Q ss_pred ceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH-hcCCc
Q 021895 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNTD 206 (306)
Q Consensus 129 ~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~-v~~~D 206 (306)
+||+|++.|. |..+...|.. .| .+|+++=.|. ..+.+.++..|+++.+-+. ..++.+.+. +.++|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g---~~v~vid~~~-----~~~~~l~~~~~~~~i~gd~---~~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RK---YGVVIINKDR-----ELCEEFAKKLKATIIHGDG---SHKEILRDAEVSKND 67 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TT---CCEEEEESCH-----HHHHHHHHHSSSEEEESCT---TSHHHHHHHTCCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCH-----HHHHHHHHHcCCeEEEcCC---CCHHHHHhcCcccCC
Confidence 4788888765 3444443432 23 5666554333 2344556667877765432 112222222 23666
Q ss_pred EEEEe
Q 021895 207 FLVLA 211 (306)
Q Consensus 207 ~vVlA 211 (306)
++|++
T Consensus 68 ~vi~~ 72 (218)
T 3l4b_C 68 VVVIL 72 (218)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66654
No 153
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=51.33 E-value=28 Score=29.62 Aligned_cols=57 Identities=12% Similarity=-0.083 Sum_probs=39.2
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC-CChhHHHHHHhCCCCEEEeCC
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~~~~~~~A~~~gIp~~~~~~ 189 (306)
+.||+|..||.- +.+..++.. . ..++.++..|+... .-..+.++|++.|||++++..
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~--~---g~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~~ 65 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK--L---GYNPHLITINFGVIPSYKLAEETAKILGFKHKVITL 65 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH--T---TEEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEEC
T ss_pred CCeEEEEEECcHHHHHHHHHHHH--c---CCCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 458999999964 444444432 2 36788777776322 235688999999999998873
No 154
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=51.30 E-value=49 Score=31.77 Aligned_cols=55 Identities=24% Similarity=0.425 Sum_probs=36.8
Q ss_pred HHhcCCcEEEEeccC---CCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYM---QPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFK 271 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~ 271 (306)
+.++++|+|..-.|. ++-.++.||. . ....-.+..+.++..+.++|=.|| ||++|
T Consensus 247 eav~~aDVVytd~W~smg~~~~~~~er~-~--------------~~~~y~vt~ell~~a~~dai~MHc--LP~~R 304 (365)
T 4amu_A 247 LAAQDADVIYTDVWVSLGEPFELFDKRI-G--------------ELKNFQVDMNMIKAAKNDVIFLHC--LPAFH 304 (365)
T ss_dssp HHTTTCSEEEECCSCCTTCCHHHHHHHH-H--------------HHTTCCBCHHHHHHSCTTCEEEEC--SCCCC
T ss_pred HHhcCCCEEEecccccCCchhhhHHHHH-H--------------HhcccccCHHHHHhcCCCcEEECC--CCCCC
Confidence 456689999996663 3222344442 0 011125899999988888999999 69998
No 155
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=51.18 E-value=89 Score=24.66 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=37.8
Q ss_pred HHhCCCCEEEeCCCCCChHHHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhh
Q 021895 177 LERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS 254 (306)
Q Consensus 177 A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~ 254 (306)
++..|+++...-..+ ...+++.+..+ ++|+||+....+ +++...+-.=....+++.
T Consensus 96 ~~~~g~~~~~~v~~G-~~~~~I~~~a~~~~~DLIVmG~~g~---------------------~~~~~~~~Gsva~~vl~~ 153 (175)
T 2gm3_A 96 CHEIGVGCEAWIKTG-DPKDVICQEVKRVRPDFLVVGSRGL---------------------GRFQKVFVGTVSAFCVKH 153 (175)
T ss_dssp HHHHTCEEEEEEEES-CHHHHHHHHHHHHCCSEEEEEECCC---------------------C--------CHHHHHHHH
T ss_pred HHHCCCceEEEEecC-CHHHHHHHHHHHhCCCEEEEeCCCC---------------------ChhhhhhcCchHHHHHhC
Confidence 455788865432222 33567888776 899999988776 222222211234566777
Q ss_pred cCCCeeEeCC
Q 021895 255 YGKDVINIHH 264 (306)
Q Consensus 255 ~~~~iINiHp 264 (306)
-+.+++=+++
T Consensus 154 a~~pVlvv~~ 163 (175)
T 2gm3_A 154 AECPVMTIKR 163 (175)
T ss_dssp CSSCEEEEEC
T ss_pred CCCCEEEEcC
Confidence 7777776654
No 156
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=51.15 E-value=20 Score=32.99 Aligned_cols=69 Identities=14% Similarity=0.175 Sum_probs=39.0
Q ss_pred CCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 127 ~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
++.||+|++.|.- ......+.. .+ .+++++|.... ..-.+.|+++|++++. .. +++++- .++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~--~~--~~~l~av~d~~-----~~~~~~a~~~g~~~~~------~~-~~ll~~-~~~ 66 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASA--AD--NLEVHGVFDIL-----AEKREAAAQKGLKIYE------SY-EAVLAD-EKV 66 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHT--ST--TEEEEEEECSS-----HHHHHHHHTTTCCBCS------CH-HHHHHC-TTC
T ss_pred CcCcEEEECcCHHHHHHHHHHHh--CC--CcEEEEEEcCC-----HHHHHHHHhcCCceeC------CH-HHHhcC-CCC
Confidence 4689999999862 222222221 11 47898887643 1224567888886421 12 233321 178
Q ss_pred cEEEEec
Q 021895 206 DFLVLAR 212 (306)
Q Consensus 206 D~vVlA~ 212 (306)
|+|+++-
T Consensus 67 D~V~i~t 73 (359)
T 3e18_A 67 DAVLIAT 73 (359)
T ss_dssp CEEEECS
T ss_pred CEEEEcC
Confidence 9999874
No 157
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=51.11 E-value=44 Score=27.39 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=46.5
Q ss_pred CceEEEEEeCCc---chHHHHHHhhhcCCCCeEEE-EEeeCC-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh
Q 021895 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEIT-CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (306)
Q Consensus 128 ~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~-~Visn~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v 202 (306)
++||.|+.+|+- .-.++++.... ++ .+|. +-++.+ ...++..+++.++++||+......+.-+ ++ .+
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~-~~--~~v~SAGt~~~~g~~~~p~a~~~l~e~Gid~~~~~ar~l~--~~---~~ 79 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLL-PS--KKINSAGVGALVDHTADESAIRVAEKNGLCLKGHRGTKFT--SA---LA 79 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC-TT--SEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCBCC--HH---HH
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhc-CC--CEEEeccccCCCCCCCCHHHHHHHHHcCCCccCCcccCCC--HH---Hh
Confidence 358999999985 34555665543 32 3442 222222 2235678899999999987432212111 21 24
Q ss_pred cCCcEEEEeccCC
Q 021895 203 QNTDFLVLARYMQ 215 (306)
Q Consensus 203 ~~~D~vVlA~ym~ 215 (306)
.+.|+|+...-.+
T Consensus 80 ~~~DlIi~m~~~~ 92 (150)
T 2wmy_A 80 RQYDLLLVMEYSH 92 (150)
T ss_dssp TTCSEEEESCHHH
T ss_pred ccCCEEEEcCHHH
Confidence 5899999875543
No 158
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=50.94 E-value=27 Score=28.02 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=45.0
Q ss_pred CceEEEEEeCCc---chHHHHHHhhhcCCCCeEE-EEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEI-TCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I-~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
++||.|+.+|+. .-.++++.....+ ..+| .+-++.+ +++..+++.++++||+......+.-+ ++. +.
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~--~~~v~SAGt~~~--~~~p~a~~~l~~~Gid~s~~~ar~l~--~~~---~~ 73 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGE--GWNVYSAGIETH--GVNPKAIEAMKEVDIDISNHTSDLID--NDI---LK 73 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTT--TEEEEEEESSCC--CCCHHHHHHHHHTTCCCTTCCCCBCC--HHH---HH
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCC--CEEEEcCcCCCC--CCCHHHHHHHHHcCCCcccCccccCC--hHH---hc
Confidence 468999999985 4455666654322 3444 2333333 36778899999999987432222111 222 23
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
+.|+|+..
T Consensus 74 ~~D~Ii~m 81 (131)
T 1jf8_A 74 QSDLVVTL 81 (131)
T ss_dssp HCSEEEEC
T ss_pred cCCEEEEc
Confidence 68998886
No 159
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=50.55 E-value=29 Score=34.56 Aligned_cols=66 Identities=11% Similarity=-0.027 Sum_probs=50.0
Q ss_pred CcccEEEEEEcC--CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhc
Q 021895 39 TLTHGIHVFHCP--DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNA 115 (306)
Q Consensus 39 ~~~k~ILTViGp--DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl 115 (306)
+..-.+|+++|. .++|+.+++-+.|+++|+||.-++|-.. .-.+.+.|+ .++..++++.+-+.|..
T Consensus 417 ~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsqGsS----ei~Is~vV~-------~~d~~~Av~aLH~~f~~ 484 (510)
T 2cdq_A 417 LKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGAS----KVNISFIVN-------EAEAEGCVQALHKSFFE 484 (510)
T ss_dssp EEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTT----CSEEEEEEE-------HHHHHHHHHHHHHHHHS
T ss_pred eCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEecCC----cceEEEEEe-------HHHHHHHHHHHHHHHhc
Confidence 345689999998 7789999999999999999999998422 223344443 46678888888777763
No 160
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=50.55 E-value=27 Score=34.53 Aligned_cols=60 Identities=8% Similarity=0.016 Sum_probs=41.8
Q ss_pred CCCCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC---CChhHHHHHHhCCC-CEEEeCC
Q 021895 125 IDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG---PNSHVIRFLERHGI-PYHYLCA 189 (306)
Q Consensus 125 ~~~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~---~~~~~~~~A~~~gI-p~~~~~~ 189 (306)
..+..||+|..||.- +++..+|.. .| .+|.+|..|+... .-..+.++|++.|| |+++++.
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e--~G---~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~ 72 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQ--KG---AVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDC 72 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEEC
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHH--cC---CEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 445679999999974 455455543 23 6888888876432 12578999999999 7887763
No 161
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=50.13 E-value=32 Score=26.26 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEee
Q 021895 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (306)
Q Consensus 100 eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Vis 163 (306)
--+|.-...+|.++|+..|..+. .+- +|-+.+.|+...+.++++.++.|.-.+.|.-|-.
T Consensus 17 VGFR~~v~~~A~~lgL~G~V~N~--~dG--~Vei~~~G~~~~v~~f~~~l~~gP~~a~V~~v~~ 76 (91)
T 1w2i_A 17 VGFRWSMQREARKLGVNGWVRNL--PDG--SVEAVLEGDEERVEALIGWAHQGPPLARVTRVEV 76 (91)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEEC--TTS--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred cCHHHHHHHHHHHcCCeEEEEEC--CCC--CEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 34688888899999987764333 222 6888888888889999998887643477876643
No 162
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=49.90 E-value=59 Score=29.22 Aligned_cols=52 Identities=10% Similarity=0.208 Sum_probs=33.9
Q ss_pred CCceEEEEEeCC-c--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 127 PKYKVAVLASKQ-E--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 127 ~~~riavl~S~~-g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
++|||+++..+. | ..+..|..++++- .++|+.+.. + ..+..+..|+++..++
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~--~------~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIAVA--E------HADRAAAAGLEVVDVA 73 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEES--S------CHHHHHTTTCEEEESS
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEecc--c------hHHHHHhCCCeeEecC
Confidence 357999887554 3 2344666666543 378875544 2 2567788999998876
No 163
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=49.86 E-value=46 Score=29.60 Aligned_cols=69 Identities=14% Similarity=0.137 Sum_probs=39.3
Q ss_pred CCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 127 ~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
+++||+|++.|.- .. .++..+..- -.+++++|+...+ ....++++++|+++ .. . .+++ ..++
T Consensus 4 ~~~~vgiiG~G~~g~~--~~~~~l~~~-~~~~lvav~d~~~----~~~~~~~~~~g~~~--~~----~-~~~l---~~~~ 66 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQK--AWLPVLAAA-SDWTLQGAWSPTR----AKALPICESWRIPY--AD----S-LSSL---AASC 66 (319)
T ss_dssp -CEEEEEECCSTHHHH--THHHHHHSC-SSEEEEEEECSSC----TTHHHHHHHHTCCB--CS----S-HHHH---HTTC
T ss_pred CcceEEEECCCHHHHH--HHHHHHHhC-CCeEEEEEECCCH----HHHHHHHHHcCCCc--cC----c-HHHh---hcCC
Confidence 3679999999862 21 022222221 1378887775432 23567888889882 11 1 2233 2478
Q ss_pred cEEEEec
Q 021895 206 DFLVLAR 212 (306)
Q Consensus 206 D~vVlA~ 212 (306)
|+|+++-
T Consensus 67 D~V~i~t 73 (319)
T 1tlt_A 67 DAVFVHS 73 (319)
T ss_dssp SEEEECS
T ss_pred CEEEEeC
Confidence 9888874
No 164
>1vmb_A 30S ribosomal protein S6; TM0603, structural genomics, JCSG, structure initiative, PSI, joint center for structural GENO translation; 1.70A {Thermotoga maritima} SCOP: d.58.14.1
Probab=49.12 E-value=54 Score=27.38 Aligned_cols=70 Identities=11% Similarity=0.110 Sum_probs=43.9
Q ss_pred CCCCCccc-E-EEEEEcCC-----ccchHHHHHHHHHhc-CCeEeEeeeecc---------CCCCeEEEEEEEEeCCCCC
Q 021895 35 SVSPTLTH-G-IHVFHCPD-----EVGIVAKLSECIASR-GGNILAADVFVP---------EKKNVFYSRSEFIFDPIKW 97 (306)
Q Consensus 35 ~~~p~~~k-~-ILTViGpD-----RpGIVAaVS~~LAe~-G~NIlD~sQ~id---------~l~G~FfMrmeVdv~~~~~ 97 (306)
-++|..|+ | ++.+.=|| ...+|..+.+.|.+. |+.|.+++.... ...|.|+ .+.|+.++.
T Consensus 12 ~~~~~~Mr~YE~~~Il~P~l~ee~v~~~ve~~~~~I~~~~GG~I~~ve~wG~R~LAY~I~K~~~G~Yv-l~~f~a~~~-- 88 (140)
T 1vmb_A 12 HMAYVKERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDYT-VIYFRCDGQ-- 88 (140)
T ss_dssp -----CCEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEEEEEETTEEEEEEE-EEEEEECSS--
T ss_pred cccccccccceEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCcccccccCCCCEEEEE-EEEEEECHH--
Confidence 36677776 3 55566676 458899999999999 999999876431 1245554 667776642
Q ss_pred CHHHHHHHHH
Q 021895 98 PREQMDEDFF 107 (306)
Q Consensus 98 ~~eeLreaL~ 107 (306)
..++|.+.|.
T Consensus 89 ~i~ELer~lr 98 (140)
T 1vmb_A 89 NLQELENFYR 98 (140)
T ss_dssp STHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 4567766554
No 165
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=48.56 E-value=16 Score=29.51 Aligned_cols=76 Identities=16% Similarity=0.155 Sum_probs=44.6
Q ss_pred CceEEEEEeCCc---chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcC
Q 021895 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 128 ~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~ 204 (306)
++||.|+.+|+- .-.++++.....+. .+|.--=+. ...++..+++.++++||+......+.- +++ .+.+
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~~~--~~v~SAGt~-g~~~~~~a~~~l~e~Gid~s~~~sr~l--~~~---~~~~ 75 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGAGK--IAVTSCGLE-SSRVHPTAIAMMEEVGIDISGQTSDPI--ENF---NADD 75 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSBTT--EEEEEECCT-TSSCCHHHHHHHHTTTCCCSSCCCCCG--GGC---CGGG
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcCCC--EEEEcccCC-CCCCCHHHHHHHHHcCCCcccCccccC--ChH---Hhcc
Confidence 458999999985 44556666554332 333221112 223677889999999998743221211 111 2347
Q ss_pred CcEEEEe
Q 021895 205 TDFLVLA 211 (306)
Q Consensus 205 ~D~vVlA 211 (306)
.|+|+..
T Consensus 76 ~DlIi~m 82 (134)
T 2l17_A 76 YDVVISL 82 (134)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9999987
No 166
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=48.55 E-value=48 Score=29.91 Aligned_cols=70 Identities=10% Similarity=0.011 Sum_probs=38.0
Q ss_pred CCceEEEEEe-CC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh--
Q 021895 127 PKYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV-- 202 (306)
Q Consensus 127 ~~~riavl~S-~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v-- 202 (306)
+++||+|++. |. +. ..+.+++.- +.++++|+...+. . ...++.++.+-.+- .-+++++.+
T Consensus 2 ~mirvgiIG~gG~i~~---~h~~~l~~~--~~~lvav~d~~~~---~--~~~~~~~~~~~~~~------~~~~ll~~~~~ 65 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAP---RHLKAIKEV--GGVLVASLDPATN---V--GLVDSFFPEAEFFT------EPEAFEAYLED 65 (312)
T ss_dssp -CCEEEEECTTSSSHH---HHHHHHHHT--TCEEEEEECSSCC---C--GGGGGTCTTCEEES------CHHHHHHHHHH
T ss_pred CceEEEEECCChHHHH---HHHHHHHhC--CCEEEEEEcCCHH---H--HHHHhhCCCCceeC------CHHHHHHHhhh
Confidence 4789999999 43 32 222333322 4799998765422 1 23455554433331 123455433
Q ss_pred ---c--CCcEEEEec
Q 021895 203 ---Q--NTDFLVLAR 212 (306)
Q Consensus 203 ---~--~~D~vVlA~ 212 (306)
. ++|+|+++-
T Consensus 66 l~~~~~~vD~V~I~t 80 (312)
T 3o9z_A 66 LRDRGEGVDYLSIAS 80 (312)
T ss_dssp HHHTTCCCSEEEECS
T ss_pred hcccCCCCcEEEECC
Confidence 2 789999874
No 167
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=48.54 E-value=40 Score=28.08 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=36.7
Q ss_pred ceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCC---hhHHHHHHhCCCCEEEeCC
Q 021895 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 129 ~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~---~~~~~~A~~~gIp~~~~~~ 189 (306)
.||+|+.||.- +.+..++.. .+ .++.+|..++..... ..+.+.|++.|||+++++.
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~--~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~ 64 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALK--EF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDM 64 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH--HC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEEccCcHHHHHHHHHHHH--cC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeC
Confidence 48999999964 344444433 34 467777666532111 2577889999999998763
No 168
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=47.25 E-value=50 Score=29.47 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=39.8
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcE
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~ 207 (306)
++||+|++.|.-. ..++..+..-. .+++++|.... .....++|+++|++..+- . -++++ -.++|+
T Consensus 1 ~~~vgiiG~G~~g--~~~~~~l~~~~-~~~~~~v~d~~----~~~~~~~~~~~~~~~~~~-----~-~~~~l--~~~~D~ 65 (325)
T 2ho3_A 1 MLKLGVIGTGAIS--HHFIEAAHTSG-EYQLVAIYSRK----LETAATFASRYQNIQLFD-----Q-LEVFF--KSSFDL 65 (325)
T ss_dssp CEEEEEECCSHHH--HHHHHHHHHTT-SEEEEEEECSS----HHHHHHHGGGSSSCEEES-----C-HHHHH--TSSCSE
T ss_pred CeEEEEEeCCHHH--HHHHHHHHhCC-CeEEEEEEeCC----HHHHHHHHHHcCCCeEeC-----C-HHHHh--CCCCCE
Confidence 4689999987621 12222322211 37888876543 234567788888754441 1 22333 137899
Q ss_pred EEEec
Q 021895 208 LVLAR 212 (306)
Q Consensus 208 vVlA~ 212 (306)
|+++-
T Consensus 66 V~i~t 70 (325)
T 2ho3_A 66 VYIAS 70 (325)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99884
No 169
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=47.13 E-value=30 Score=32.93 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=38.1
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC-----------ChhHHHHHHhCCCCEEEeCC
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~-----------~~~~~~~A~~~gIp~~~~~~ 189 (306)
+..||+|..||.- ..+..+|.. .| .+|.+|..++-... -..+.+.|++.|||+++++.
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~ 86 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQ--QG---YQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF 86 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHT--TC---CEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHH--cC---CeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4569999999974 333334432 33 78888887642101 12567889999999999873
No 170
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=46.63 E-value=25 Score=27.55 Aligned_cols=69 Identities=14% Similarity=0.220 Sum_probs=38.9
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcE
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDF 207 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~ 207 (306)
.+||+|+++|.- =..++..+.. .+++ + ++.+++ .....++++++|+.+.... ++.+.+.++|+
T Consensus 21 ~~~v~iiG~G~i--G~~~a~~l~~--~g~~-v-~v~~r~---~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGML--ASEIAPYFSY--PQYK-V-TVAGRN---IDHVRAFAEKYEYEYVLIN--------DIDSLIKNNDV 83 (144)
T ss_dssp CCEEEEECCSHH--HHHHGGGCCT--TTCE-E-EEEESC---HHHHHHHHHHHTCEEEECS--------CHHHHHHTCSE
T ss_pred CCEEEEECCCHH--HHHHHHHHHh--CCCE-E-EEEcCC---HHHHHHHHHHhCCceEeec--------CHHHHhcCCCE
Confidence 458999998642 2233333333 2466 3 334442 2345677888886554321 12234568999
Q ss_pred EEEecc
Q 021895 208 LVLARY 213 (306)
Q Consensus 208 vVlA~y 213 (306)
||.+--
T Consensus 84 vi~at~ 89 (144)
T 3oj0_A 84 IITATS 89 (144)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 999843
No 171
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=46.56 E-value=51 Score=25.65 Aligned_cols=61 Identities=7% Similarity=-0.097 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhh-cCCCCeEEEEEeeC
Q 021895 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISN 164 (306)
Q Consensus 100 eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~-~g~l~~~I~~Visn 164 (306)
--+|.-...+|.++|+..|..+.. +- +|-+.+.|+...+.+++..++ +|.-.+.|.-|-..
T Consensus 24 VGFR~~v~~~A~~lgL~G~V~N~~--dG--~Vei~~eG~~~~l~~f~~~l~~~gP~~a~V~~v~~~ 85 (102)
T 1urr_A 24 VFFRKHTSHEAKRLGVRGWCMNTR--DG--TVKGQLEAPMMNLMEMKHWLENNRIPNAKVSKAEFS 85 (102)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEECT--TS--CEEEEEEECHHHHHHHHHHHHHCCSTTCEEEEEEEC
T ss_pred cChhHHHHHHHHHhCCcEEEEECC--CC--CEEEEEEcCHHHHHHHHHHHHhcCCCccEEEEEEEE
Confidence 346888888899999887643332 22 688888888888999999887 56434788777443
No 172
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=46.50 E-value=39 Score=26.32 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEee
Q 021895 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (306)
Q Consensus 101 eLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Vis 163 (306)
-+|.-...+|.++|+..|..+..| . +|-+.+.|+...+.+++..++.|.-.+.|.-|-.
T Consensus 26 GFR~~v~~~A~~lgL~G~VrN~~d--G--~Vei~~eG~~~~l~~f~~~l~~gPp~A~V~~v~~ 84 (98)
T 3trg_A 26 FFRESVRKKAEELQLTGWVKNLSH--G--DVELVACGERDSIMILTEWLWEGPPQAAVSNVNW 84 (98)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHTTTCSTTCEEEEEEE
T ss_pred CccHHHHHHHHHcCCeEEEEECCC--C--EEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 467788888999998876443322 2 6888888888899999999888643377776654
No 173
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=46.05 E-value=56 Score=24.72 Aligned_cols=87 Identities=10% Similarity=0.092 Sum_probs=46.7
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcC-CCCeEEEE--EeeCCCCCCC---------------------hhHHHHHHhCCC-
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEG-KLPVEITC--VISNHDRGPN---------------------SHVIRFLERHGI- 182 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g-~l~~~I~~--Visn~~~~~~---------------------~~~~~~A~~~gI- 182 (306)
.+||.|-+.++.+...++-++..-- ...+++++ |+........ ....+.+++.|+
T Consensus 5 ~~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ 84 (146)
T 3s3t_A 5 YTNILVPVDSSDAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVATTSAP 84 (146)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEEECCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred cceEEEEcCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4588888888765555543332211 11345544 4443321100 112334556788
Q ss_pred CEEEeCCCCCChHHHHHH-Hhc--CCcEEEEeccCC
Q 021895 183 PYHYLCAKENEREEELLE-LVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 183 p~~~~~~k~~~~e~e~~~-~v~--~~D~vVlA~ym~ 215 (306)
++...-..+ ...+++.+ ..+ ++|+||+....+
T Consensus 85 ~~~~~~~~g-~~~~~I~~~~a~~~~~dliV~G~~~~ 119 (146)
T 3s3t_A 85 NLKTEISYG-IPKHTIEDYAKQHPEIDLIVLGATGT 119 (146)
T ss_dssp CCEEEEEEE-CHHHHHHHHHHHSTTCCEEEEESCCS
T ss_pred ceEEEEecC-ChHHHHHHHHHhhcCCCEEEECCCCC
Confidence 655432222 33567888 774 899999987766
No 174
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=45.99 E-value=85 Score=29.76 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=22.8
Q ss_pred cCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 246 ILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 246 il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+..+.++..+.++|=.|| ||++||-
T Consensus 273 ~vt~ell~~ak~dai~mHc--LPa~Rg~ 298 (339)
T 4a8t_A 273 QVNQEMMDRAGANCKFMHC--LPATRGE 298 (339)
T ss_dssp CBCHHHHHHHCTTCEEEEC--SCCCBTT
T ss_pred ccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 6889999888889999999 6999984
No 175
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=45.37 E-value=42 Score=26.22 Aligned_cols=62 Identities=18% Similarity=0.104 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEee
Q 021895 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163 (306)
Q Consensus 98 ~~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Vis 163 (306)
..--+|.-...+|.++|+..+..+.. +- +|-+.+.|+...+.+++..++.|.-.+.|.-|-.
T Consensus 25 QGVGFR~~v~~~A~~lgL~G~V~N~~--dG--~Vei~~eG~~~~i~~f~~~l~~gP~~A~V~~v~~ 86 (101)
T 2bjd_A 25 QGVGFRKFVQIHAIRLGIKGYAKNLP--DG--SVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDY 86 (101)
T ss_dssp SSSSHHHHHHHHHHHTTCEEEEEECT--TS--CEEEEEEEEHHHHHHHHHHHTTCSTTCEEEEEEE
T ss_pred CCcCHHHHHHHHHHHcCCeEEEEECC--CC--cEEEEEEeCHHHHHHHHHHHHhCCCccEEEEEEE
Confidence 33457888888999999877643332 22 6888888887889999999888732377776643
No 176
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=44.41 E-value=25 Score=28.77 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=41.8
Q ss_pred cccEEEEEEcC---CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhh
Q 021895 40 LTHGIHVFHCP---DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFN 114 (306)
Q Consensus 40 ~~k~ILTViGp---DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elg 114 (306)
..-.+++++|. +++|+.+++-+.|+ |+||.-++|-.. .-.+.+.++ .++..++++.+-++|.
T Consensus 86 ~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~S----e~~is~vv~-------~~d~~~a~~~Lh~~f~ 150 (157)
T 3mah_A 86 KDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGS----NYNVSVLVK-------AEDKKKALIALSNKLF 150 (157)
T ss_dssp EEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSS----SSCEEEEEE-------GGGHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCC----CCEEEEEEc-------HHHHHHHHHHHHHHHh
Confidence 34578999997 57899999999999 999999998432 112334443 2445666666666765
No 177
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=44.03 E-value=25 Score=30.79 Aligned_cols=86 Identities=9% Similarity=0.049 Sum_probs=46.9
Q ss_pred HHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceeee----------cCCCCCce
Q 021895 61 ECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRV----------PDIDPKYK 130 (306)
Q Consensus 61 ~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~rl----------~~~~~~~r 130 (306)
+.|.+.|...+.+++-.. ...++-+++|.+|.-++. +|-..--+++ ...++++|
T Consensus 19 ~~l~~~g~~~iss~~l~~---------------~~~~~~~~iRkdls~~g~-~G~~g~gY~v~~L~~~~~~~lg~~~~~r 82 (211)
T 2dt5_A 19 EELEAQGVHRTSSEQLGG---------------LAQVTAFQVRKDLSYFGS-YGTRGVGYTVPVLKRELRHILGLNRKWG 82 (211)
T ss_dssp HHHHHTTCCEECHHHHHH---------------HHTSCHHHHHHHHHHTTC-CCCTTTCEEHHHHHHHHHHHHTTTSCEE
T ss_pred HHHHHcCCcEECHHHHHH---------------HhCCCHHHeechHHHHHH-hcCCceeEEhHHHHHHHHHHhCcCCCCE
Confidence 345667777766665321 023556777777776632 2211111111 12356689
Q ss_pred EEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCC
Q 021895 131 VAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165 (306)
Q Consensus 131 iavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~ 165 (306)
|++.+.|.- =++++....... ..++++++...
T Consensus 83 V~IIGaG~~--G~~la~~~~~~~-g~~iVg~~D~d 114 (211)
T 2dt5_A 83 LCIVGMGRL--GSALADYPGFGE-SFELRGFFDVD 114 (211)
T ss_dssp EEEECCSHH--HHHHHHCSCCCS-SEEEEEEEESC
T ss_pred EEEECccHH--HHHHHHhHhhcC-CcEEEEEEeCC
Confidence 999988762 223343322234 68999999865
No 178
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=43.69 E-value=46 Score=25.89 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=25.4
Q ss_pred HHHHhCCCCEEEeCCCCCChHHHHHHHhc--CCcEEEEeccCC
Q 021895 175 RFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 175 ~~A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
+.++..|+++...-..+ ...+++.+..+ ++|+||+....+
T Consensus 90 ~~~~~~g~~~~~~v~~G-~~~~~I~~~a~~~~~dlIV~G~~g~ 131 (162)
T 1mjh_A 90 KELEDVGFKVKDIIVVG-IPHEEIVKIAEDEGVDIIIMGSHGK 131 (162)
T ss_dssp HHHHHTTCEEEEEEEEE-CHHHHHHHHHHHTTCSEEEEESCCS
T ss_pred HHHHHcCCceEEEEcCC-CHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 33456788765432112 23467777776 899999987766
No 179
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=43.62 E-value=40 Score=30.85 Aligned_cols=75 Identities=11% Similarity=0.047 Sum_probs=40.9
Q ss_pred CCCceEEEEE-eCCc-c--hH----HHHHHhhhc----CCCC--eEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCC
Q 021895 126 DPKYKVAVLA-SKQE-H--CL----VDFLYGWQE----GKLP--VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE 191 (306)
Q Consensus 126 ~~~~riavl~-S~~g-~--~L----~~ll~~~~~----g~l~--~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~ 191 (306)
.++.||++++ .|.. . .+ .++... .. +..+ .++ .|++++ .....++|+++|+|..+-
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~-~~~~l~~~~~~~~~~--av~~~~---~~~a~~~a~~~~~~~~~~---- 73 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GGVRLKNGDRIMPDP--ILVGRS---AEKVEALAKRFNIARWTT---- 73 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH-TSEECTTSCEEEEEE--EEECSS---SHHHHHHHHHTTCCCEES----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc-CceeecCCcccceee--EEEcCC---HHHHHHHHHHhCCCcccC----
Confidence 4578999999 8773 2 23 444322 10 1111 233 345442 245688899999984441
Q ss_pred CChHHHHHHHhcCCcEEEEecc
Q 021895 192 NEREEELLELVQNTDFLVLARY 213 (306)
Q Consensus 192 ~~~e~e~~~~v~~~D~vVlA~y 213 (306)
. -+++++- .++|+|+++.-
T Consensus 74 -~-~~~ll~~-~~iD~V~i~tp 92 (383)
T 3oqb_A 74 -D-LDAALAD-KNDTMFFDAAT 92 (383)
T ss_dssp -C-HHHHHHC-SSCCEEEECSC
T ss_pred -C-HHHHhcC-CCCCEEEECCC
Confidence 1 1233321 16899998753
No 180
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=43.57 E-value=22 Score=34.51 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=42.2
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~-- 203 (306)
..|||.|++.|+ |..|...|.. + .++|+.|=.|++ .+.+.++++++++.+=+ ..+.++++...
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~--~---~~~v~vId~d~~-----~~~~~~~~~~~~~i~Gd----~~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVG--E---NNDITIVDKDGD-----RLRELQDKYDLRVVNGH----ASHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCS--T---TEEEEEEESCHH-----HHHHHHHHSSCEEEESC----TTCHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHH--C---CCCEEEEECCHH-----HHHHHHHhcCcEEEEEc----CCCHHHHHhcCCC
Confidence 468999999987 4566555532 2 377875544432 34555677888876522 22344554443
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
++|++|.+
T Consensus 68 ~ad~~ia~ 75 (461)
T 4g65_A 68 DADMLVAV 75 (461)
T ss_dssp TCSEEEEC
T ss_pred cCCEEEEE
Confidence 77776653
No 181
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=43.13 E-value=72 Score=28.15 Aligned_cols=52 Identities=10% Similarity=0.015 Sum_probs=32.6
Q ss_pred CceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
++||.++..+. || .+..|..++++- .++|+.+.+ . ...+..++.|++++.++
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~-~------~~~~~~~~~G~~~~~~~ 58 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRITYVTT-P------LFADEVKAAGAEVVLYK 58 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEEC-H------HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEEEcC-H------HHHHHHHHcCCEEEecc
Confidence 35898887764 33 333455555432 478875543 2 24677788999998876
No 182
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=42.79 E-value=29 Score=32.90 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=38.7
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC-----------ChhHHHHHHhCCCCEEEeCC
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-----------NSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~-----------~~~~~~~A~~~gIp~~~~~~ 189 (306)
+..||+|..||.- ..+..+|.. .| .+|.+|..++.... -..+.+.|++.|||+++++.
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~--~G---~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~ 78 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE--QG---YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNF 78 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH--TT---CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH--cC---CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeC
Confidence 4569999999974 333334432 33 68888877652111 12567889999999999873
No 183
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=42.78 E-value=12 Score=36.14 Aligned_cols=88 Identities=14% Similarity=0.256 Sum_probs=42.3
Q ss_pred CCCCCceEEEEEeCC-cchHHHHHHhhhcC--CC-CeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC-CC--CC-ChH
Q 021895 124 DIDPKYKVAVLASKQ-EHCLVDFLYGWQEG--KL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AK--EN-ERE 195 (306)
Q Consensus 124 ~~~~~~riavl~S~~-g~~L~~ll~~~~~g--~l-~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~-~k--~~-~~e 195 (306)
..+++.||+|+++|. |+.|..+|..-..+ .. ..+|..-.-+.+. .+....+.-.+.+-...|++ -+ ++ ...
T Consensus 30 ~~~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~-~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 30 AAEKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEI-NGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBS-SSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred ccCCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHh-hhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 345778999999996 78888777543211 11 1345444322221 11122232222221111222 11 11 011
Q ss_pred HHHHHHhcCCcEEEEec
Q 021895 196 EELLELVQNTDFLVLAR 212 (306)
Q Consensus 196 ~e~~~~v~~~D~vVlA~ 212 (306)
.++.+.++++|+||+|=
T Consensus 109 ~dl~~al~~ad~ii~av 125 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNI 125 (391)
T ss_dssp SCHHHHHTTCSEEEECS
T ss_pred CCHHHHHhcCCEEEEEC
Confidence 24566778999999983
No 184
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=42.13 E-value=2e+02 Score=27.51 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=38.2
Q ss_pred HHHhcCCcEEEEeccCCCCcCchhhhhhhh--hhhhhccCCCccccc-cccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYK--LLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+.++++|+|..-+|- +|++.|-. .++- ..|+ .-.+..+.++..+ .+|=.|| ||++||-
T Consensus 260 ~eav~~aDvVyt~~w~------se~~mg~~~~~~~~-------~~~~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg~ 321 (359)
T 1zq6_A 260 DSAYAGADVVYAKSWG------ALPFFGNWEPEKPI-------RDQYQHFIVDERKMALTN-NGVFSHC--LPLRRNV 321 (359)
T ss_dssp HHHHTTCSEEEEECCC------CGGGTTCCTTHHHH-------HGGGGGGSBCHHHHHTSS-SCEEECC--SCCCBTT
T ss_pred HHHhcCCCEEEECCcc------ccccCCcchhhHHH-------HHHhcCCCCCHHHHHhCC-CCEEECC--CCCCCCc
Confidence 3456689999998873 34443320 0110 1111 2268999999888 9999999 6999984
No 185
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=41.93 E-value=41 Score=25.48 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=28.0
Q ss_pred HHHHHHhCCCCE---EEeCCCCCChHHHHHHHhc--CCcEEEEeccCC
Q 021895 173 VIRFLERHGIPY---HYLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 173 ~~~~A~~~gIp~---~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
..+.++++|+++ ...-..+ ...+++.+..+ ++|+||+....+
T Consensus 75 ~~~~~~~~g~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~ 121 (147)
T 3hgm_A 75 AKTRATELGVPADKVRAFVKGG-RPSRTIVRFARKRECDLVVIGAQGT 121 (147)
T ss_dssp HHHHHHHTTCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEECSSCT
T ss_pred HHHHHHhcCCCccceEEEEecC-CHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 345667889887 4322222 33467888776 899999987766
No 186
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=41.63 E-value=2.4e+02 Score=27.01 Aligned_cols=52 Identities=15% Similarity=0.232 Sum_probs=33.9
Q ss_pred HHhcCCcEEEEecc---CCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcC---CCeeEeCCCCCCCC
Q 021895 200 ELVQNTDFLVLARY---MQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYG---KDVINIHHGLLPSF 270 (306)
Q Consensus 200 ~~v~~~D~vVlA~y---m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~---~~iINiHpsLLP~f 270 (306)
+.++++|+|..-+| .++ . +.| +..|. ..--+..+.++..+ .++|=.|| ||++
T Consensus 241 eav~~aDvvytd~w~smg~e-e-~~e-r~~~~--------------~~y~v~~ell~~ak~~~~dai~MHc--LP~~ 298 (359)
T 2w37_A 241 EGLKGSNVVYTDVWVSMGES-N-WEE-RVKEL--------------TPYQVNMEAMKKTGTPDDQLIFMHC--LPAF 298 (359)
T ss_dssp HHHTTCSEEEECCSCCTTCT-T-HHH-HHHHH--------------GGGCBCHHHHHTTCCCGGGCEEEEC--SCCC
T ss_pred HHhcCCCEEEEccccccccc-c-hHH-HHHHh--------------hccccCHHHHHhhCCCCCCEEEECC--CCCC
Confidence 45668999999999 332 1 111 11110 01157888888877 68999998 7998
No 187
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=41.56 E-value=1.1e+02 Score=26.50 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=44.5
Q ss_pred ceEEEEEeCCc-ch--HHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCC---CC---------
Q 021895 129 YKVAVLASKQE-HC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKE---NE--------- 193 (306)
Q Consensus 129 ~riavl~S~~g-~~--L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~---~~--------- 193 (306)
+||+++..+.| +. ..+|..++.+- .++|..+.... . ...+..++.|++++.++... ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~-~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTAD-R----MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTT-S----THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEEecCC-c----chhhhccccCCceEEecCCccCcCccHHHHHHHH
Confidence 79999877664 22 23566666542 47887554432 1 12344566799988776321 10
Q ss_pred h----HHHHHHHhc--CCcEEEEecc
Q 021895 194 R----EEELLELVQ--NTDFLVLARY 213 (306)
Q Consensus 194 ~----e~e~~~~v~--~~D~vVlA~y 213 (306)
+ -.++.+.++ ++|+|+.-+.
T Consensus 80 ~~~~~~~~l~~~l~~~~pDvv~~~~~ 105 (364)
T 1f0k_A 80 RIFNAWRQARAIMKAYKPDVVLGMGG 105 (364)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 0 023445554 8999998754
No 188
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=41.27 E-value=81 Score=30.57 Aligned_cols=75 Identities=9% Similarity=0.110 Sum_probs=42.3
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCC---------CCC---
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK---------ENE--- 193 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k---------~~~--- 193 (306)
+..||+|++.|. |.+...++.+ .| ++|+ +.++. ...++.+++.|..+..+... +..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~--lG---a~V~--v~D~~----~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARR--LG---AVVS--ATDVR----PAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TT---CEEE--EECSS----TTHHHHHHHTTCEECCCCC----------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CC---CEEE--EEcCC----HHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 457999999876 3455455544 23 5654 33331 12367778888764332210 000
Q ss_pred -------hHHHHHHHhcCCcEEEEec
Q 021895 194 -------REEELLELVQNTDFLVLAR 212 (306)
Q Consensus 194 -------~e~e~~~~v~~~D~vVlA~ 212 (306)
..+.+.+.++++|+|+.+-
T Consensus 258 s~~~~~~~~~~l~e~l~~aDVVI~tv 283 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQDIVITTA 283 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred chhhhhhhHhHHHHHhcCCCEEEECC
Confidence 0135677777999999763
No 189
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=41.21 E-value=17 Score=31.23 Aligned_cols=65 Identities=18% Similarity=0.371 Sum_probs=35.2
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|. |..+...|. +.| .+| .+.+++ .....++++++|+.+. .. -+ +.++++|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~--~~g---~~v--~~~~~~---~~~~~~~~~~~g~~~~------~~-~~---~~~~~~D 62 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLK--QTP---HEL--IISGSS---LERSKEIAEQLALPYA------MS-HQ---DLIDQVD 62 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHT--TSS---CEE--EEECSS---HHHHHHHHHHHTCCBC------SS-HH---HHHHTCS
T ss_pred ccEEEEECCCHHHHHHHHHHH--hCC---CeE--EEECCC---HHHHHHHHHHcCCEee------CC-HH---HHHhcCC
Confidence 46999999876 333332222 123 444 344542 2345556666676531 11 12 2345899
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++=
T Consensus 63 ~Vi~~v 68 (259)
T 2ahr_A 63 LVILGI 68 (259)
T ss_dssp EEEECS
T ss_pred EEEEEe
Confidence 999984
No 190
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=40.99 E-value=47 Score=31.51 Aligned_cols=52 Identities=13% Similarity=0.216 Sum_probs=31.5
Q ss_pred CCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC
Q 021895 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 183 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp 183 (306)
.+++||+|++.|.-.. ..++..+..-. .+++++|+... .....++++++|++
T Consensus 81 ~~~irigiIG~G~~g~-~~~~~~l~~~~-~~~lvav~d~~----~~~~~~~a~~~g~~ 132 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYAL-NQILPGFAGCQ-HSRIEALVSGN----AEKAKIVAAEYGVD 132 (433)
T ss_dssp CCCEEEEEECCSHHHH-HTHHHHTTTCS-SEEEEEEECSC----HHHHHHHHHHTTCC
T ss_pred CCceEEEEECCcHHHH-HHHHHHHhhCC-CcEEEEEEcCC----HHHHHHHHHHhCCC
Confidence 3467999999875210 12333333211 37888877643 23467788999987
No 191
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=40.86 E-value=1.7e+02 Score=25.06 Aligned_cols=116 Identities=10% Similarity=0.066 Sum_probs=62.4
Q ss_pred CceEEEEEeCCcchHHHHHHhhh-cCCCCeEEEEEeeCCCCCCC---hhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~-~g~l~~~I~~Visn~~~~~~---~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+||.|...++.....++-++.. .....++++++-...++... ....+.++..|+++...-.......+++.+..+
T Consensus 7 ~~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~ 86 (290)
T 3mt0_A 7 IRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRRDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQ 86 (290)
T ss_dssp CCEEEEECCSSCSCCHHHHHHHHHHHHHCCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHH
T ss_pred hceEEEEeCCCccchHHHHHHHHHHHhcCCeEEEEEeeCcHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH
Confidence 46888888877654444333221 11123566555443221111 123445667899887644222233467777765
Q ss_pred --CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCC
Q 021895 204 --NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHH 264 (306)
Q Consensus 204 --~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHp 264 (306)
++|+||+....+ +++...+-.=....+++.-+.+++=+++
T Consensus 87 ~~~~dliV~G~~~~---------------------~~~~~~~~gs~~~~vl~~~~~PVlvv~~ 128 (290)
T 3mt0_A 87 AEGCGLIIKQHFPD---------------------NPLKKAILTPDDWKLLRFAPCPVLMTKT 128 (290)
T ss_dssp HHTCSEEEEECCCS---------------------CTTSTTSCCHHHHHHHHHCSSCEEEECC
T ss_pred hcCCCEEEEecccC---------------------CchhhcccCHHHHHHHhcCCCCEEEecC
Confidence 899999976655 2222221112345666777777776663
No 192
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=40.69 E-value=1.1e+02 Score=28.34 Aligned_cols=109 Identities=19% Similarity=0.280 Sum_probs=60.9
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCC-CeEEEEEeeCCCC-CCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKL-PVEITCVISNHDR-GPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l-~~~I~~Visn~~~-~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~ 204 (306)
..||++++-+. +.....++.++. ++ ++++. ++.++. .++..+.+.|++.|..+..... +.+.+++
T Consensus 151 glkva~vGD~~~~rva~Sl~~~~~--~~~G~~v~--~~~P~~~~~~~~~~~~~~~~g~~~~~~~d--------~~eav~~ 218 (306)
T 4ekn_B 151 GIKIAFVGDLKYGRTVHSLVYALS--LFENVEMY--FVSPKELRLPKDIIEDLKAKNIKFYEKES--------LDDLDDD 218 (306)
T ss_dssp TCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEE--EECCGGGCCCHHHHHHHHHTTCCEEEESC--------GGGCCTT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHH--hcCCCEEE--EECCcccccCHHHHHHHHHcCCEEEEEcC--------HHHHhcC
Confidence 46788877653 233444554432 34 45653 333321 1345667778888877765431 1234568
Q ss_pred CcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccc----cccCCHhHHhhcCCCeeEeCCCCCCCCCC
Q 021895 205 TDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF----NMILSGKFLRSYGKDVINIHHGLLPSFKG 272 (306)
Q Consensus 205 ~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~il~~~~l~~~~~~iINiHpsLLP~f~G 272 (306)
+|+|..-+| |+|++-+ ..+|. .-.+..+.++. .+.|=.||. | ||
T Consensus 219 aDvvy~~~~------q~er~~~------------~~e~~~~~~~y~v~~~~l~~--~~ai~mH~l--P--Rg 266 (306)
T 4ekn_B 219 IDVLYVTRI------QKERFPD------------PNEYEKVKGSYKIKREYVEG--KKFIIMHPL--P--RV 266 (306)
T ss_dssp CSEEEECCC------CGGGCCS------------HHHHHHHHHHHCBCHHHHTT--CCCEEECCS--C--CS
T ss_pred CCEEEeCCc------ccccCCC------------HHHHHHhccCcEECHHHHcC--CCCEEECCC--C--CC
Confidence 999998766 3444311 11111 12578888887 567888884 5 66
No 193
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=40.33 E-value=58 Score=27.44 Aligned_cols=79 Identities=13% Similarity=0.233 Sum_probs=45.7
Q ss_pred CceEEEEEeCCc---chHHHHHHhhhcCCCCeEEE-EEeeCC-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHh
Q 021895 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEIT-CVISNH-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV 202 (306)
Q Consensus 128 ~~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~-~Visn~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v 202 (306)
++||.|+.+|+- .-.++++.... ++ .+|. +-++.+ ..+++..+++.++++||+......+.-+ ++. +
T Consensus 22 m~~VLFVCtgN~cRSpmAEal~r~~~-~~--~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~--~~~---~ 93 (167)
T 2fek_A 22 FNNILVVCVGNICRSPTAERLLQRYH-PE--LKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQIS--RRL---C 93 (167)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC-TT--CEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCBCC--HHH---H
T ss_pred cCeEEEEcCCcHHHHHHHHHHHHHhc-CC--eEEEeeecCCCCCCCCCHHHHHHHHHcCCCccCCcCccCC--HHH---h
Confidence 458999999985 44555665543 22 3432 222212 2235678899999999987432222111 222 3
Q ss_pred cCCcEEEEeccC
Q 021895 203 QNTDFLVLARYM 214 (306)
Q Consensus 203 ~~~D~vVlA~ym 214 (306)
.+.|+|+...-.
T Consensus 94 ~~~DlIitM~~~ 105 (167)
T 2fek_A 94 RNYDLILTMEKR 105 (167)
T ss_dssp HHSSEEEESCHH
T ss_pred ccCCEEEEcCHH
Confidence 378999987553
No 194
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=40.28 E-value=60 Score=25.05 Aligned_cols=58 Identities=9% Similarity=-0.114 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhh-cCCCCeEEEEEe
Q 021895 101 QMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ-EGKLPVEITCVI 162 (306)
Q Consensus 101 eLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~-~g~l~~~I~~Vi 162 (306)
-+|.-...+|.++|+..|..+.. +- +|-+.+.|+...+.+++..++ .|.-.+.|.-|-
T Consensus 22 GFR~~v~~~A~~lgL~G~V~N~~--dG--~Vei~~eG~~~~v~~f~~~l~~~~p~~a~V~~v~ 80 (99)
T 2vh7_A 22 FFRKHTQAEGKKLGLVGWVQNTD--RG--TVQGQLQGPISKVRHMQEWLETRGSPKSHIDKAN 80 (99)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECT--TS--CEEEEEEEEHHHHHHHHHHHHHTCSTTCEEEEEE
T ss_pred ChHHHHHHHHHHcCCcEEEEECC--CC--CEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEE
Confidence 46888888899999887643332 22 688888888788999999886 453337776664
No 195
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=40.09 E-value=2.4e+02 Score=26.50 Aligned_cols=62 Identities=13% Similarity=0.094 Sum_probs=35.2
Q ss_pred HHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 199 LELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+.++++|+|..-+|-. +++-|-.-++.- -.+.|..-.+..+..+.-+ +.|=.|| ||+.||-
T Consensus 260 ~eav~~aDvvyt~r~q~------~r~~~~~~~~~~----~~~~~~~y~v~~~l~~~~~-~ai~MHp--lP~~Rg~ 321 (359)
T 3kzn_A 260 DSAYAGADVVYAKSWGA------LPFFGNWEPEKP----IRDQYQHFIVDERKMALTN-NGVFSHC--LPLRRNV 321 (359)
T ss_dssp HHHHTTCSEEEEECCCC------GGGTTCCTTHHH----HHGGGGGGSBCHHHHHTSS-SCEEECC--SCCCBTT
T ss_pred HHHhcCCeEEEEEEEEE------eecccchhhhHH----HHHHHhccChHHHHhcCCC-CCEEECC--CCCCCCC
Confidence 35566899999988843 444332111100 0011222356777776554 5666897 4999984
No 196
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=39.66 E-value=1.3e+02 Score=23.40 Aligned_cols=68 Identities=18% Similarity=0.103 Sum_probs=40.5
Q ss_pred HHHhCCCCEEE--eCCCCCChHHHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhH
Q 021895 176 FLERHGIPYHY--LCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKF 251 (306)
Q Consensus 176 ~A~~~gIp~~~--~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 251 (306)
.++..|+++.. .-..+ ...+++.+..+ ++|+||+....+ +++...+-.=....+
T Consensus 86 ~~~~~g~~~~~~~~~~~g-~~~~~I~~~a~~~~~DlIV~G~~g~---------------------~~~~~~~~Gsv~~~v 143 (170)
T 2dum_A 86 EVKRAFRAKNVRTIIRFG-IPWDEIVKVAEEENVSLIILPSRGK---------------------LSLSHEFLGSTVMRV 143 (170)
T ss_dssp HHHHHTTCSEEEEEEEEE-CHHHHHHHHHHHTTCSEEEEESCCC---------------------CC--TTCCCHHHHHH
T ss_pred HHHHcCCceeeeeEEecC-ChHHHHHHHHHHcCCCEEEECCCCC---------------------CccccceechHHHHH
Confidence 34456888764 22112 23467888776 899999987766 222222211234567
Q ss_pred HhhcCCCeeEeCCC
Q 021895 252 LRSYGKDVINIHHG 265 (306)
Q Consensus 252 l~~~~~~iINiHps 265 (306)
++.-+.+++=+++.
T Consensus 144 l~~~~~PVlvv~~~ 157 (170)
T 2dum_A 144 LRKTKKPVLIIKEV 157 (170)
T ss_dssp HHHCSSCEEEECCC
T ss_pred HHhCCCCEEEEccC
Confidence 77777787777643
No 197
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=39.19 E-value=31 Score=29.34 Aligned_cols=74 Identities=8% Similarity=0.075 Sum_probs=41.9
Q ss_pred CCCCceEEEEEeCCcchHHHHHHhhhc-CCCCeEEEEEeeCCCCCCCh-hHHHHHHhCCCCEEEeC-CCCCCh--HHHHH
Q 021895 125 IDPKYKVAVLASKQEHCLVDFLYGWQE-GKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENER--EEELL 199 (306)
Q Consensus 125 ~~~~~riavl~S~~g~~L~~ll~~~~~-g~l~~~I~~Visn~~~~~~~-~~~~~A~~~gIp~~~~~-~k~~~~--e~e~~ 199 (306)
..++.||+|+.+|..-. +++ .. |+ | .| .|+ .+..++++.|+.+.... -+++.. .+.+.
T Consensus 12 ~~~~~rv~IittGde~~-~~~----~~~G~----i------~D--sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~ 74 (178)
T 2pjk_A 12 APKSLNFYVITISTSRY-EKL----LKKEP----I------VD--ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFT 74 (178)
T ss_dssp -CCCCEEEEEEECHHHH-HHH----HTTCC----C------CC--HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccc-ccc----ccCCe----E------ee--hHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHH
Confidence 34678999999997422 222 23 32 2 11 233 35667888997655432 122111 13444
Q ss_pred HHhcC--CcEEEEeccCC
Q 021895 200 ELVQN--TDFLVLARYMQ 215 (306)
Q Consensus 200 ~~v~~--~D~vVlA~ym~ 215 (306)
+.+++ +|+|++.|=.-
T Consensus 75 ~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 75 DALSIDEVDVIISTGGTG 92 (178)
T ss_dssp HHHTCTTCCEEEEESCCS
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 55555 99999988655
No 198
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=39.05 E-value=1.3e+02 Score=26.33 Aligned_cols=109 Identities=8% Similarity=0.051 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhhhcccce-eeecCCCCCceEEEEEeCCc-chHHHHHHhhhc--CCCCeEEEEEeeCCCCCCChhHHH
Q 021895 100 EQMDEDFFKLSKMFNAMRSV-VRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQE--GKLPVEITCVISNHDRGPNSHVIR 175 (306)
Q Consensus 100 eeLreaL~~la~elgl~~~~-~rl~~~~~~~riavl~S~~g-~~L~~ll~~~~~--g~l~~~I~~Visn~~~~~~~~~~~ 175 (306)
++.++...+.++++|-.-+. .+-....++.+|+++..... .....++.++++ .+...++....++.+.......++
T Consensus 39 ~~tr~rV~~~~~~lgY~pn~~a~~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~ 118 (344)
T 3kjx_A 39 DATRARVLAAAKELGYVPNKIAGALASNRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLY 118 (344)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCCSCSTTSCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHhhcCCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHH
Confidence 56677888888888732211 11112345678999987643 344455544332 233456544334332111123345
Q ss_pred HHHhCCCCEEEeCCCCCChHHHHHHHhc--CCcEEEE
Q 021895 176 FLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVL 210 (306)
Q Consensus 176 ~A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~D~vVl 210 (306)
.....++--..+..... +++.++.+. +.=+|++
T Consensus 119 ~l~~~~vdGiIi~~~~~--~~~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 119 EMLSWRPSGVIIAGLEH--SEAARAMLDAAGIPVVEI 153 (344)
T ss_dssp HHHTTCCSEEEEECSCC--CHHHHHHHHHCSSCEEEE
T ss_pred HHHhCCCCEEEEECCCC--CHHHHHHHHhCCCCEEEE
Confidence 55667776655542221 123444443 4455555
No 199
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=38.76 E-value=82 Score=30.14 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=22.8
Q ss_pred cCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 246 ILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 246 il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
.+..+.++..+.++|=.|| ||++||-
T Consensus 251 ~vt~ell~~ak~dai~MHc--LPa~Rg~ 276 (355)
T 4a8p_A 251 QVNQEMMDRAGANCKFMHC--LPATRGE 276 (355)
T ss_dssp CBCHHHHHHHCTTCEEEEC--SCCCBTT
T ss_pred ccCHHHHHhcCCCcEEECC--CCCCCCC
Confidence 6889999988889999999 6999984
No 200
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=38.40 E-value=56 Score=27.60 Aligned_cols=79 Identities=15% Similarity=0.178 Sum_probs=43.0
Q ss_pred ceEEEEEeCCc---chHHHHHHhhhcCCCCeEEE-EEee-CCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 129 YKVAVLASKQE---HCLVDFLYGWQEGKLPVEIT-CVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 129 ~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~-~Vis-n~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
+||.|+.+|+- .-.++++.... ++ .+|. +-++ .....++..+++.++++||+..-...+.-+ ++ .+.
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~--~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~--~~---~~~ 98 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PS--KKINSAGVGALVDHAADESAIRVAEKNGLCLKGHRGTKFT--SA---LAR 98 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TT--SEEEEEETTCCTTCCCCHHHHHC---CCCCCTTCCCCBCC--HH---HHT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CC--eEEEeeecCCCCCCCCCHHHHHHHHHcCCCcccCccCCCC--hh---Hhc
Confidence 48999999985 44555665543 22 3432 2222 222235678899999999987422212111 21 244
Q ss_pred CCcEEEEeccCC
Q 021895 204 NTDFLVLARYMQ 215 (306)
Q Consensus 204 ~~D~vVlA~ym~ 215 (306)
+.|+|+...-.+
T Consensus 99 ~~DlIitM~~~~ 110 (168)
T 2wja_A 99 QYDLLLVMEYSH 110 (168)
T ss_dssp TCSEEEESSHHH
T ss_pred cCCEEEEcCHHH
Confidence 899999875443
No 201
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=38.06 E-value=74 Score=26.88 Aligned_cols=86 Identities=14% Similarity=0.211 Sum_probs=47.5
Q ss_pred CCCCceEEEEEeCCc---chHHHHHHhhh-cCCCC--eEE-EEEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChH
Q 021895 125 IDPKYKVAVLASKQE---HCLVDFLYGWQ-EGKLP--VEI-TCVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENERE 195 (306)
Q Consensus 125 ~~~~~riavl~S~~g---~~L~~ll~~~~-~g~l~--~~I-~~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e 195 (306)
...++||.|+.+|+- .-.++++...- +-.+. .+| .+-++. | ..+++..+++.++++||+..-...+.-+ +
T Consensus 15 ~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~ar~l~-~ 93 (173)
T 4etm_A 15 RGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVS-E 93 (173)
T ss_dssp CSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCCCCBCC-H
T ss_pred CCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCccccCC-H
Confidence 345789999999985 34455554431 11232 444 233332 2 1224567899999999986432211111 2
Q ss_pred HHHHHHhcCCcEEEEeccCC
Q 021895 196 EELLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 196 ~e~~~~v~~~D~vVlA~ym~ 215 (306)
+ .+.+.|+|+..--.+
T Consensus 94 -~---d~~~~DlIl~Md~~~ 109 (173)
T 4etm_A 94 -Q---DLDDFDYIIAMDAEN 109 (173)
T ss_dssp -H---HHHHCSEEEESSHHH
T ss_pred -h---hcCCCCEEEEeCchH
Confidence 2 233689998865433
No 202
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=37.74 E-value=1.2e+02 Score=26.99 Aligned_cols=51 Identities=14% Similarity=0.161 Sum_probs=31.3
Q ss_pred CceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEe
Q 021895 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187 (306)
Q Consensus 128 ~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~ 187 (306)
+|||++++.+. || -+..|..++++- .++|..+. .. ...+..+..|++++.+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v~~-~~------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLIAA-PP------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEEEE-CH------HHHHHHHHBTCEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEEec-Ch------hhHHHHHhCCCceeee
Confidence 46898887554 33 233455555432 37876543 22 2456778899998887
No 203
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=37.62 E-value=2.2e+02 Score=25.30 Aligned_cols=123 Identities=10% Similarity=0.072 Sum_probs=66.6
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeeecc--CCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceee
Q 021895 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVP--EKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVR 121 (306)
Q Consensus 44 ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id--~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~r 121 (306)
|.-++|+-..+...+++.++.+.++=.+....+.. ...+.|+.|+.. +....-..+.++.+.+|
T Consensus 72 V~aiiG~~~S~~~~a~~~~~~~~~ip~is~~~~~~~l~~~~~~~~r~~~-------~~~~~~~~~~~~~~~~g------- 137 (395)
T 3h6g_A 72 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLYP-------DFSSLSRAILDLVQFFK------- 137 (395)
T ss_dssp CSCEECCSSHHHHHHHHHHHHHTTCCEEECSCCCCCTTCCCCSEEEEEE-------CHHHHHHHHHHHHHHTT-------
T ss_pred cEEEECCCChhHHHHHHHHHhcCCCCeEeeccCcccccccCceEEEecC-------CHHHHHHHHHHHHHHCC-------
Confidence 66788999999999999999999988776443321 123456555532 22445556666666654
Q ss_pred ecCCCCCceEEEEEeCC-c-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 122 VPDIDPKYKVAVLASKQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 122 l~~~~~~~riavl~S~~-g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
-+||+++.... | ..++++.+.+++ ...+|+...-......-...++..++.+-.+.++.
T Consensus 138 ------~~~v~ii~d~~~g~~~~~~~~~~~~~--~g~~v~~~~~~~~~~d~~~~l~~i~~~~~~vi~~~ 198 (395)
T 3h6g_A 138 ------WKTVTVVYDDSTGLIRLQELIKAPSR--YNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFD 198 (395)
T ss_dssp ------CSEEEEEESSTHHHHHTHHHHTGGGT--SSCEEEEEECCSSGGGGHHHHHHHHHTTCCEEEEE
T ss_pred ------CeEEEEEEEChhHHHHHHHHHHhhhc--CCceEEEEEeCCCchhHHHHHHHHhhcCCeEEEEE
Confidence 13788875322 1 233444443332 23455443211110011344555566565554443
No 204
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=37.30 E-value=77 Score=24.09 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhh-hcCCCCeEEEEEe
Q 021895 102 MDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGW-QEGKLPVEITCVI 162 (306)
Q Consensus 102 LreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~-~~g~l~~~I~~Vi 162 (306)
+|.-...+|.++|+..|..+.. +- +|-+.+.|+...+.+++..+ +.|.-.+.|.-|-
T Consensus 19 FR~~v~~~A~~lgL~G~V~N~~--dG--~Vei~~eG~~~~i~~f~~~l~~~gP~~a~V~~v~ 76 (92)
T 2gv1_A 19 FRYTTQYEAKRLGLTGYAKNLD--DG--SVEVVACGEEGQVEKLMQWLKSGGPRSARVERVL 76 (92)
T ss_dssp CCSHHHHHHHHHTCCCEEEECS--SS--CEEEEECSCHHHHHHHHHHHHHTSSTTSEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEECC--CC--cEEEEEEeCHHHHHHHHHHhhccCCCceEEEEEE
Confidence 4566677888999877643332 22 68889999888899999988 7773237777664
No 205
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=37.15 E-value=93 Score=26.96 Aligned_cols=112 Identities=10% Similarity=-0.000 Sum_probs=60.1
Q ss_pred CCCCCCcccEEEEEEcCCccch--HHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHh
Q 021895 34 SSVSPTLTHGIHVFHCPDEVGI--VAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSK 111 (306)
Q Consensus 34 ~~~~p~~~k~ILTViGpDRpGI--VAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~ 111 (306)
..++|.+|+ .++|.|.-|. =..|-++|.+.|..++|.-.+.. + .++..++-....+.
T Consensus 15 ~~~~~~~Mk---IaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~--~--------------~~dYPd~a~~va~~-- 73 (166)
T 3s5p_A 15 QTQGPGSMK---VAFASDHGGRDLRMFLQQRASAHGYEVMDLGTESD--A--------------SVDYPDFAKIGCEA-- 73 (166)
T ss_dssp ----CTTCE---EEEEECGGGHHHHHHHHHHHHHTTCEEEEEEC------------------------CHHHHHHHHH--
T ss_pred cCCCCCceE---EEEEECchHHHHHHHHHHHHHHCCCEEEEcCCCCC--C--------------CCCHHHHHHHHHHH--
Confidence 356788887 4569999984 45788899999999999866421 0 12233333333321
Q ss_pred hhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCC-CCEEEeCC
Q 021895 112 MFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHG-IPYHYLCA 189 (306)
Q Consensus 112 elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~g-Ip~~~~~~ 189 (306)
.. ...-.+=|.+.+||.|-++.+ .+.|.--++++++. .-.++|++|+ -.+..+..
T Consensus 74 -V~---------~g~~d~GIliCGTGiG~sIaA-------NKv~GIRAAlc~d~------~sA~laR~hNnANVL~lG~ 129 (166)
T 3s5p_A 74 -VT---------SGRADCCILVCGTGIGISIAA-------NKMKGIRCALCSTE------YDAEMARKHNNANALALGG 129 (166)
T ss_dssp -HH---------TTSCSEEEEEESSSHHHHHHH-------HTSTTCCEEECSSH------HHHHHHHHTTCCCEEEEET
T ss_pred -HH---------cCCCcEEEEEcCCcHHHHHHh-------hcCCCeEEEEeCCH------HHHHHHHHhCCCcEEEEcc
Confidence 11 111223466666666544432 23444445555553 4578888886 55555543
No 206
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=36.88 E-value=70 Score=26.56 Aligned_cols=83 Identities=8% Similarity=0.049 Sum_probs=45.7
Q ss_pred CCceEEEEEeCCc---chHHHHHHhhhc-CCC--CeEE-EEEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 021895 127 PKYKVAVLASKQE---HCLVDFLYGWQE-GKL--PVEI-TCVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (306)
Q Consensus 127 ~~~riavl~S~~g---~~L~~ll~~~~~-g~l--~~~I-~~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e 197 (306)
+++||.|+.+|+- .-.++++..... -.| ..+| .+-++. | ...++..+++.++++||+.... .+.-+ ++
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~-ar~l~--~~ 79 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSI-SRPVV--SS 79 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCB-CCBCC--HH
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCe-eeECC--HH
Confidence 3679999999985 344455544321 112 1344 222232 2 1225677899999999997322 12111 22
Q ss_pred HHHHhcCCcEEEEeccCC
Q 021895 198 LLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 198 ~~~~v~~~D~vVlA~ym~ 215 (306)
.+.+.|+|+...-.+
T Consensus 80 ---~~~~~DlIl~Md~~~ 94 (161)
T 3jvi_A 80 ---DFKNFDYIFAMDNDN 94 (161)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HhcCCCEEEEeChHH
Confidence 233789999875544
No 207
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=36.86 E-value=1.6e+02 Score=25.48 Aligned_cols=64 Identities=8% Similarity=0.148 Sum_probs=39.8
Q ss_pred CCCCEEEeCCCCCChHHHHHHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCe
Q 021895 180 HGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDV 259 (306)
Q Consensus 180 ~gIp~~~~~~k~~~~e~e~~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~i 259 (306)
.|+++...-..+ ...+++++..+++|+||+..+.+ +++...+--=.+..+++.-+.++
T Consensus 244 ~~~~~~~~~~~g-~~~~~I~~~a~~adliV~G~~~~---------------------~~~~~~l~Gsv~~~vl~~~~~pV 301 (309)
T 3cis_A 244 PNVAITRVVVRD-QPARQLVQRSEEAQLVVVGSRGR---------------------GGYAGMLVGSVGETVAQLARTPV 301 (309)
T ss_dssp TTSCEEEEEESS-CHHHHHHHHHTTCSEEEEESSCS---------------------SCCTTCSSCHHHHHHHHHCSSCE
T ss_pred CCCcEEEEEEcC-CHHHHHHHhhCCCCEEEECCCCC---------------------CCccccccCcHHHHHHhcCCCCE
Confidence 578766533222 34567888878999999999887 22322222223556677777777
Q ss_pred eEeCCC
Q 021895 260 INIHHG 265 (306)
Q Consensus 260 INiHps 265 (306)
+=+++.
T Consensus 302 lvv~~~ 307 (309)
T 3cis_A 302 IVARES 307 (309)
T ss_dssp EEECC-
T ss_pred EEeCCC
Confidence 766653
No 208
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=36.58 E-value=81 Score=29.45 Aligned_cols=123 Identities=10% Similarity=0.093 Sum_probs=68.0
Q ss_pred EeCCcchHHHHHHhh----hcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCCh---------------H
Q 021895 135 ASKQEHCLVDFLYGW----QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER---------------E 195 (306)
Q Consensus 135 ~S~~g~~L~~ll~~~----~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~---------------e 195 (306)
++...|..|+|+|-. ..|.+..--++.|.+..+ -....+..+...|+.+.+++.++-.. .
T Consensus 129 g~~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~-va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~ 207 (309)
T 4f2g_A 129 LTNEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDANN-MLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVF 207 (309)
T ss_dssp ECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCCH-HHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEEC
T ss_pred CCCccCcHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEE
Confidence 344568778877642 236554222344444311 01134556677798888776432100 0
Q ss_pred HHHHHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 196 EELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 196 ~e~~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
..+.+.++++|+|..-.|-. ...|.- ..+ -...+..-.+..+.++..+.++|=.|| ||++||-
T Consensus 208 ~d~~eav~~aDvvyt~~w~s---mg~e~~----~~~------r~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg~ 270 (309)
T 4f2g_A 208 DDPNEACKGADLVTTDVWTS---MGFEAE----NEA------RKRAFADWCVDEEMMSHANSDALFMHC--LPAHRGE 270 (309)
T ss_dssp SSHHHHTTTCSEEEECCC-------------------------CCSGGGGCBCHHHHTTSCTTCEEEEC--SSCCBTT
T ss_pred cCHHHHhcCCCEEEeccccc---Ccchhh----HHH------HHHHhcCceeCHHHHHhcCCCeEEECC--CCCCCCc
Confidence 23456677999999988733 111000 000 001112236899999988889999999 6999984
No 209
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=36.50 E-value=1.4e+02 Score=26.26 Aligned_cols=82 Identities=9% Similarity=0.107 Sum_probs=43.7
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCE-EEeCCC-C-CCh-H------
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAK-E-NER-E------ 195 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~-~~~~~k-~-~~~-e------ 195 (306)
++||.+++.... .....++.++++. -..++..+++.. ......+..+..|+++ +.++.. . ... .
T Consensus 5 mmkIl~v~~~~~~~~~~~~l~~~L~~~-~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (376)
T 1v4v_A 5 MKRVVLAFGTRPEATKMAPVYLALRGI-PGLKPLVLLTGQ---HREQLRQALSLFGIQEDRNLDVMQERQALPDLAARIL 80 (376)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTS-TTEEEEEEECSS---CHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHH
T ss_pred ceEEEEEEeccHHHHHHHHHHHHHHhC-CCCceEEEEcCC---cHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHH
Confidence 478988875432 2345666666542 026776666643 1122334456688876 333311 1 111 1
Q ss_pred HHHHHHhc--CCcEEEEecc
Q 021895 196 EELLELVQ--NTDFLVLARY 213 (306)
Q Consensus 196 ~e~~~~v~--~~D~vVlA~y 213 (306)
..+.+.++ ++|+|++-++
T Consensus 81 ~~l~~~l~~~~pDvv~~~~~ 100 (376)
T 1v4v_A 81 PQAARALKEMGADYVLVHGD 100 (376)
T ss_dssp HHHHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHHHcCCCEEEEeCC
Confidence 23455554 8999999754
No 210
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=36.34 E-value=37 Score=25.91 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=42.8
Q ss_pred cEEEEEEcCCccc-hHHHHHHHHHhcCCeEeEeeeeccCCCCeEE-EEEEEEeCCCCCCHHHHHHHHHHHHh
Q 021895 42 HGIHVFHCPDEVG-IVAKLSECIASRGGNILAADVFVPEKKNVFY-SRSEFIFDPIKWPREQMDEDFFKLSK 111 (306)
Q Consensus 42 k~ILTViGpDRpG-IVAaVS~~LAe~G~NIlD~sQ~id~l~G~Ff-MrmeVdv~~~~~~~eeLreaL~~la~ 111 (306)
.|-+.|+|+..++ +.++|-.++ +.+..+...+ ..-.|.|. ..+.+.+. +.+++.+-.+++++
T Consensus 15 ~~~~Kvig~~~~~~~~~~V~~v~-~~~~~~~~~r---~Ss~GkY~Svtv~i~a~----s~eq~~~iY~~L~~ 78 (86)
T 2h9z_A 15 LWDYRVIMTTKDTSTLKELLETY-QRPFKLEFKN---TSKNAKFYSFNVSMEVS----NESERNEIFQKISQ 78 (86)
T ss_dssp EEEEEEEECCSCTHHHHHHSTTC-CSSEECCBSC---SSCCSSCEEEEEEEECC----SHHHHHHHHHHHTC
T ss_pred CceEEEEEECCcHHHHHHHHHHH-hccCCCcccc---cCCCCeEEEEEEEEEEC----CHHHHHHHHHHHhc
Confidence 5788999999999 999999888 5555432222 23467776 45555543 57888887777654
No 211
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=36.07 E-value=82 Score=28.43 Aligned_cols=70 Identities=7% Similarity=0.020 Sum_probs=37.7
Q ss_pred CCceEEEEEe-CC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH---
Q 021895 127 PKYKVAVLAS-KQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL--- 201 (306)
Q Consensus 127 ~~~riavl~S-~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~--- 201 (306)
+++||+|++. |. +. ..+.+++.. ++++++|.+..+. . ...++.++.+-.+- .-+++++.
T Consensus 2 ~mirvgiIG~gG~i~~---~h~~~l~~~--~~~lvav~d~~~~---~--~~~~~~~~~~~~~~------~~~~ll~~~~~ 65 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAP---RHMRAIKDT--GNCLVSAYDINDS---V--GIIDSISPQSEFFT------EFEFFLDHASN 65 (318)
T ss_dssp -CCEEEEETTTSSSHH---HHHHHHHHT--TCEEEEEECSSCC---C--GGGGGTCTTCEEES------SHHHHHHHHHH
T ss_pred CceEEEEECCCcHHHH---HHHHHHHhC--CCEEEEEEcCCHH---H--HHHHhhCCCCcEEC------CHHHHHHhhhh
Confidence 4789999999 43 32 222333322 5789988765422 1 23455554443331 12345432
Q ss_pred h----c-CCcEEEEec
Q 021895 202 V----Q-NTDFLVLAR 212 (306)
Q Consensus 202 v----~-~~D~vVlA~ 212 (306)
+ . ++|+|+++-
T Consensus 66 l~~~~~~~vD~V~I~t 81 (318)
T 3oa2_A 66 LKRDSATALDYVSICS 81 (318)
T ss_dssp HTTSTTTSCCEEEECS
T ss_pred hhhccCCCCcEEEECC
Confidence 2 2 789999874
No 212
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RIBO protein S6, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=35.41 E-value=1.2e+02 Score=23.91 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=39.8
Q ss_pred EEEEEcCC-----ccchHHHHHHHHHhcCCeEeEeeeec---------cCCCCeEEEEEEEEe-CCCCCCHHHHHHHHH
Q 021895 44 IHVFHCPD-----EVGIVAKLSECIASRGGNILAADVFV---------PEKKNVFYSRSEFIF-DPIKWPREQMDEDFF 107 (306)
Q Consensus 44 ILTViGpD-----RpGIVAaVS~~LAe~G~NIlD~sQ~i---------d~l~G~FfMrmeVdv-~~~~~~~eeLreaL~ 107 (306)
++.+.=|| ...+|..+.+.|.++|+.|.+++.-. ....|.|+ .+.|+. ++. ..++|...|.
T Consensus 12 ~~~Il~p~l~~e~~~~~v~~~~~~i~~~Gg~i~~~e~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~~~--~i~eler~lr 87 (110)
T 2j5a_A 12 TVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYF-LVQFKTENPQ--LPNELDFQLK 87 (110)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEECSSCSSSCSEEEEE-EEEEEESCTT--HHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeCCHH--HHHHHHHHhC
Confidence 44444565 46789999999999999999987643 11245555 677777 432 3555555443
No 213
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=35.35 E-value=42 Score=28.61 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=41.4
Q ss_pred CCCceEEEEEeCCc---chHHHHHHhhhcC-CCCeEEE-EEeeC-CCCCCChhHHHH-HHhCCCCEEEeCCCCCChHHHH
Q 021895 126 DPKYKVAVLASKQE---HCLVDFLYGWQEG-KLPVEIT-CVISN-HDRGPNSHVIRF-LERHGIPYHYLCAKENEREEEL 198 (306)
Q Consensus 126 ~~~~riavl~S~~g---~~L~~ll~~~~~g-~l~~~I~-~Visn-~~~~~~~~~~~~-A~~~gIp~~~~~~k~~~~e~e~ 198 (306)
..++||.|+.+|+- .-.++++.....+ ....+|. +-++. +..+++....+. ++++||++.-...+.-+ ++
T Consensus 32 ~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~g~~~~~~a~~~l~~e~Gidis~h~sr~l~-~~-- 108 (180)
T 4egs_A 32 RGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPEGFPASSEAVEVLKKEYGIDISDHRAKSLR-EE-- 108 (180)
T ss_dssp --CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCTTCCCCHHHHHHHHHHHCCCCTTCCCCBCC-SH--
T ss_pred CCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcCCCCCChHHHHHHHHHcCcCcccCcccccC-hh--
Confidence 45789999999985 3444555433221 1234442 22222 211123334444 57899987432222111 11
Q ss_pred HHHhcCCcEEEEecc
Q 021895 199 LELVQNTDFLVLARY 213 (306)
Q Consensus 199 ~~~v~~~D~vVlA~y 213 (306)
.+++.|+|+...-
T Consensus 109 --d~~~~DlIi~Md~ 121 (180)
T 4egs_A 109 --DLKGADLVLAMAF 121 (180)
T ss_dssp --HHHHCSEEEESSH
T ss_pred --hCcCCCEEEEcCH
Confidence 2337899998754
No 214
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=35.09 E-value=27 Score=34.83 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=29.3
Q ss_pred ccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeee
Q 021895 41 THGIHVFHCPDEVGIVAKLSECIASRGGNILAADVF 76 (306)
Q Consensus 41 ~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~ 76 (306)
....+.+.=|||||-.+++++.|. +.||++++..
T Consensus 337 r~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~ 370 (514)
T 1tdj_A 337 REALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYR 370 (514)
T ss_dssp CEEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEE
T ss_pred CcccccccCCCCCchHHHHHHHhC--CCceEEEEee
Confidence 346677888999999999999887 7999999875
No 215
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=34.91 E-value=64 Score=28.65 Aligned_cols=65 Identities=14% Similarity=0.185 Sum_probs=37.6
Q ss_pred ceEEEEEeCC-cch--HHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--
Q 021895 129 YKVAVLASKQ-EHC--LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ-- 203 (306)
Q Consensus 129 ~riavl~S~~-g~~--L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~-- 203 (306)
+||+|++.|. |.. +..+. .+ ..++++|.... .....++++++|++..+ .. -+ +++.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~----~~--~~~~vav~d~~----~~~~~~~~~~~g~~~~~-----~~-~~---~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIR----AT--GGEVVSMMSTS----AERGAAYATENGIGKSV-----TS-VE---ELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHH----HT--TCEEEEEECSC----HHHHHHHHHHTTCSCCB-----SC-HH---HHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhh----cC--CCeEEEEECCC----HHHHHHHHHHcCCCccc-----CC-HH---HHhcCC
Confidence 4899999875 222 22332 22 37888776543 23456788899986222 11 12 2343
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 62 ~~D~V~i~t 70 (332)
T 2glx_A 62 DVDAVYVST 70 (332)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEeC
Confidence 588888874
No 216
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=34.73 E-value=69 Score=31.41 Aligned_cols=83 Identities=14% Similarity=0.184 Sum_probs=51.2
Q ss_pred CCCceEEEEEeCC--cchHHHHHHhhhcCCCCeEEEEEee-CCCCCCChhHHHHHHhCCCCEEEeCCCCC---------C
Q 021895 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVIS-NHDRGPNSHVIRFLERHGIPYHYLCAKEN---------E 193 (306)
Q Consensus 126 ~~~~riavl~S~~--g~~L~~ll~~~~~g~l~~~I~~Vis-n~~~~~~~~~~~~A~~~gIp~~~~~~k~~---------~ 193 (306)
+.++||+||+|.. |++--+++.+..+ ..+|++... ++ .-.-..+-|++++-.+.++..... .
T Consensus 19 ~~mk~i~ILGSTGSIGtqtLdVi~~~pd---~f~V~aLaa~g~---nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~ 92 (398)
T 2y1e_A 19 DGRLRVVVLGSTGSIGTQALQVIADNPD---RFEVVGLAAGGA---HLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYH 92 (398)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCTT---TEEEEEEEECSS---CHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEE
T ss_pred CCceEEEEEccCcHHHHHHHHHHHhCCC---ceEEEEEEecCC---CHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEe
Confidence 4467899999986 3544466654211 379999988 54 123467778889877766653110 0
Q ss_pred hHHHHHHHhc--CCcEEEEeccC
Q 021895 194 REEELLELVQ--NTDFLVLARYM 214 (306)
Q Consensus 194 ~e~e~~~~v~--~~D~vVlA~ym 214 (306)
-++.+.++.. ++|+||-|=-+
T Consensus 93 G~~~l~~~a~~~~~D~Vv~AIvG 115 (398)
T 2y1e_A 93 GSDAATRLVEQTEADVVLNALVG 115 (398)
T ss_dssp STTHHHHHHHHSCCSEEEECCCS
T ss_pred cHHHHHHHhcCCCCCEEEEeCcC
Confidence 1244556654 68998886433
No 217
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=34.73 E-value=70 Score=25.11 Aligned_cols=72 Identities=8% Similarity=-0.025 Sum_probs=36.7
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHH--HhCCCCEEEeCCCCCChHHHHHHH-hc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL--ERHGIPYHYLCAKENEREEELLEL-VQ 203 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A--~~~gIp~~~~~~k~~~~e~e~~~~-v~ 203 (306)
+.+|.|++.|. |..+...|.. .| .+|++|-.+. .....+.. ...|+.+.+-+. ..++.+.+. +.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g---~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~---~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RG---QNVTVISNLP----EDDIKQLEQRLGDNADVIPGDS---NDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TT---CCEEEEECCC----HHHHHHHHHHHCTTCEEEESCT---TSHHHHHHHTTT
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CC---CCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCC---CCHHHHHHcChh
Confidence 45788887654 3444444432 23 5676554432 11112222 245777766431 223334343 55
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
++|.+|++
T Consensus 71 ~ad~vi~~ 78 (153)
T 1id1_A 71 RCRAILAL 78 (153)
T ss_dssp TCSEEEEC
T ss_pred hCCEEEEe
Confidence 89988886
No 218
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=34.55 E-value=30 Score=33.65 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=37.0
Q ss_pred CceEEEEEeCCcchHHHHH-----Hhh---hcCC-CCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQEHCLVDFL-----YGW---QEGK-LPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll-----~~~---~~g~-l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
+.-++|.+|++|++.+-+. ..| +.|+ ....+++|-+| .++++.+.|+++||+++.++
T Consensus 116 ~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~vavT~~----~~s~L~~~a~~~Gi~~f~~~ 181 (415)
T 1zzg_A 116 RKTLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLVVTTDP----KEGPLRAFAEREGLKAFAIP 181 (415)
T ss_dssp GGEEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEEEEECS----SSSHHHHHHHHHTCEEEECC
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEEEEeCC----CCChHHHHHHHhCCcEEEec
Confidence 3358899999996554432 222 1131 12456666555 34689999999999888876
No 219
>3r8n_F 30S ribosomal protein S6; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_F 3fih_F* 3iy8_F 3j18_F* 2wwl_F 3oar_F 3oaq_F 3ofb_F 3ofa_F 3ofp_F 3ofx_F 3ofy_F 3ofo_F 3r8o_F 4a2i_F 4gd1_F 4gd2_F 2gy9_F 2gyb_F
Probab=34.52 E-value=40 Score=26.17 Aligned_cols=55 Identities=11% Similarity=0.154 Sum_probs=38.1
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeecc---------CCCCeEEEEEEEEeCCCCCCHHHHHHHHH
Q 021895 50 PDEVGIVAKLSECIASRGGNILAADVFVP---------EKKNVFYSRSEFIFDPIKWPREQMDEDFF 107 (306)
Q Consensus 50 pDRpGIVAaVS~~LAe~G~NIlD~sQ~id---------~l~G~FfMrmeVdv~~~~~~~eeLreaL~ 107 (306)
.+...+|..+.+.+.++|+.|.+++.... ...|.|+ .+.|+.++. ..++|...|.
T Consensus 16 e~~~~~~~~~~~~i~~~gg~i~~~e~wG~r~LAY~I~k~~~G~Y~-l~~f~a~~~--~i~eler~lr 79 (100)
T 3r8n_F 16 EQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV-LMNVEAPQE--VIDELETTFR 79 (100)
T ss_dssp THHHHHHHHHHHHHHTTTCBCCCCEEEEEECCSSCTTSCSCEEEE-ECCEEECTT--TTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeeecccCCeEcCCCCEEEEE-EEEEEeChH--HHHHHHHHhc
Confidence 34567888999999999999998876531 2246655 667776643 4567776664
No 220
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=34.10 E-value=1.6e+02 Score=26.82 Aligned_cols=51 Identities=12% Similarity=0.088 Sum_probs=31.7
Q ss_pred ceEEEEEeCCc-c--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 129 YKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 129 ~riavl~S~~g-~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
|||++++.+.. | -+..|..++++- +++|+.+. .. ...+..+..|++++.+.
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~v~~-~~------~~~~~v~~~g~~~~~l~ 54 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADARMCL-PP------DYVERCAEVGVPMVPVG 54 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEEEEE-CG------GGHHHHHHTTCCEEECS
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEEEEe-CH------HHHHHHHHcCCceeecC
Confidence 58888876653 2 233555555442 36776543 32 24678889999998876
No 221
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=34.06 E-value=1.8e+02 Score=25.17 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=39.7
Q ss_pred ceEEEEEe-CC-c-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 129 YKVAVLAS-KQ-E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 129 ~riavl~S-~~-g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
+||.|.+. |. | +....|+. .| .+|.++.-+.+ .....++..+..|+.+...+. ...+.+.+.++.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~l~R~~~--~~~~~~~~l~~~~v~~v~~Dl---~d~~~l~~a~~~~ 80 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLK---LG---HPTYVFTRPNS--SKTTLLDEFQSLGAIIVKGEL---DEHEKLVELMKKV 80 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHH---TT---CCEEEEECTTC--SCHHHHHHHHHTTCEEEECCT---TCHHHHHHHHTTC
T ss_pred CeEEEECCCchHHHHHHHHHHH---CC---CcEEEEECCCC--chhhHHHHhhcCCCEEEEecC---CCHHHHHHHHcCC
Confidence 46777763 32 3 33444443 24 57766554432 122222223456777766552 1245677788899
Q ss_pred cEEEEec
Q 021895 206 DFLVLAR 212 (306)
Q Consensus 206 D~vVlA~ 212 (306)
|.||.+.
T Consensus 81 d~vi~~a 87 (318)
T 2r6j_A 81 DVVISAL 87 (318)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9988754
No 222
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=33.87 E-value=2.3e+02 Score=24.48 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCCEEEeCCCCCChHHHHHHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCee
Q 021895 181 GIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVI 260 (306)
Q Consensus 181 gIp~~~~~~k~~~~e~e~~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iI 260 (306)
|+++...-..+ ...+++.+..+++|+||+..-.+ +++...+-.=....+++.-+.+++
T Consensus 100 ~~~~~~~~~~g-~~~~~I~~~a~~~DliV~G~~g~---------------------~~~~~~~~Gs~~~~vl~~~~~PVl 157 (309)
T 3cis_A 100 PPTVHSEIVPA-AAVPTLVDMSKDAVLMVVGCLGS---------------------GRWPGRLLGSVSSGLLRHAHCPVV 157 (309)
T ss_dssp CSCEEEEEESS-CHHHHHHHHGGGEEEEEEESSCT---------------------TCCTTCCSCHHHHHHHHHCSSCEE
T ss_pred CceEEEEEecC-CHHHHHHHHhcCCCEEEECCCCC---------------------ccccccccCcHHHHHHHhCCCCEE
Confidence 88876643222 33467888777999999987665 222222222234567777788888
Q ss_pred EeCCCCC----C-------CCCCCcHHHHHHHHHh----hcCceeeeec
Q 021895 261 NIHHGLL----P-------SFKGGKPAKQVGCFTF----CLGNLITILS 294 (306)
Q Consensus 261 NiHpsLL----P-------~f~Ga~p~~~A~~~~~----~l~~~~~~~~ 294 (306)
=+.+..- + +++|...-.+|+.... ..|.=++++.
T Consensus 158 vv~~~~~~~~~~~~~~Ilv~~D~s~~s~~al~~a~~la~~~~a~l~ll~ 206 (309)
T 3cis_A 158 IIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALH 206 (309)
T ss_dssp EECTTCCCSCSSCCCCEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEcCCcccCCCCCCCeEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 7776542 2 2345555455544433 3455556554
No 223
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=33.85 E-value=82 Score=31.25 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=30.9
Q ss_pred cEEEEEEc---CCccchHHHHHHHHHhcCCeEeEeeee
Q 021895 42 HGIHVFHC---PDEVGIVAKLSECIASRGGNILAADVF 76 (306)
Q Consensus 42 k~ILTViG---pDRpGIVAaVS~~LAe~G~NIlD~sQ~ 76 (306)
-..|++.| ++++|+.++|=+.|+++|+||.-+.+.
T Consensus 341 ~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss 378 (510)
T 2cdq_A 341 VTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS 378 (510)
T ss_dssp EEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred eEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC
Confidence 35788887 789999999999999999999999773
No 224
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=33.70 E-value=2.3e+02 Score=24.47 Aligned_cols=48 Identities=13% Similarity=0.015 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeC--CcchHHHHHHh
Q 021895 100 EQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASK--QEHCLVDFLYG 148 (306)
Q Consensus 100 eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~--~g~~L~~ll~~ 148 (306)
++-++...+.++++|-.-+...- ...++.+|+|+... ...-...++.+
T Consensus 16 ~~tr~rV~~aa~elgY~pn~~Ar-~~~~~~~Igvi~~~~~~~~~~~~~~~g 65 (342)
T 1jx6_A 16 PEQRNLTNALSEAVRAQPVPLSK-PTQRPIKISVVYPGQQVSDYWVRNIAS 65 (342)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCSS-CCSSCEEEEEEECCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcccc-ccCCceEEEEEecCCcccHHHHHHHHH
Confidence 56677888888888842211101 23455689998876 23333444443
No 225
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=33.69 E-value=82 Score=26.14 Aligned_cols=83 Identities=13% Similarity=0.168 Sum_probs=46.8
Q ss_pred CCceEEEEEeCCc---chHHHHHHhhhcC-CCC--eEE-EEEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 021895 127 PKYKVAVLASKQE---HCLVDFLYGWQEG-KLP--VEI-TCVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (306)
Q Consensus 127 ~~~riavl~S~~g---~~L~~ll~~~~~g-~l~--~~I-~~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e 197 (306)
.++||.|+.+|+- .-.++++...... .|. .+| .+-++. | ...++..+++.++++||++.. ..+.-+ + +
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~-~ar~l~-~-~ 80 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSH-VARQIT-K-E 80 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCCCC-CCCBCC-H-H
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCCCC-ceeECC-H-H
Confidence 4679999999985 3445555543221 122 344 222232 2 123567889999999999622 112111 2 2
Q ss_pred HHHHhcCCcEEEEeccCC
Q 021895 198 LLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 198 ~~~~v~~~D~vVlA~ym~ 215 (306)
.+.+.|+|+...-.+
T Consensus 81 ---~~~~~DlIi~M~~~n 95 (157)
T 3n8i_A 81 ---DFATFDYILCMDESN 95 (157)
T ss_dssp ---HHHHCSEEEESSHHH
T ss_pred ---HcCCCCEEEEeCcHH
Confidence 234789999876554
No 226
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=33.47 E-value=42 Score=28.42 Aligned_cols=56 Identities=5% Similarity=0.001 Sum_probs=37.2
Q ss_pred ceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC---ChhHHHHHHhCCCCEEEeCC
Q 021895 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 129 ~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~---~~~~~~~A~~~gIp~~~~~~ 189 (306)
.||+|-.||.- ..|-.++.... .+|.+|..|+.-.. ...+.++|+++|||++++..
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~-----~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~~ 105 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIR-----PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRA 105 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS-----TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhC-----CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEeC
Confidence 38999999864 45555555442 24556666663211 24678889999999998863
No 227
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=33.36 E-value=1.1e+02 Score=28.36 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=64.9
Q ss_pred cchHHHHHHhh----hcCCCCeEEEEEeeC--CCCCCChhHHHHHHhCCCCEEEeCCCCCCh----------HHHHHHHh
Q 021895 139 EHCLVDFLYGW----QEGKLPVEITCVISN--HDRGPNSHVIRFLERHGIPYHYLCAKENER----------EEELLELV 202 (306)
Q Consensus 139 g~~L~~ll~~~----~~g~l~~~I~~Visn--~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~----------e~e~~~~v 202 (306)
.|..|+|+|-. ..|.+..--++.|.+ +.+ -....+..+.+.|+.+.+++.++-.. ...+.+.+
T Consensus 125 ~HPtQaLaDl~Ti~e~~g~l~gl~va~vGDl~~~r-va~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav 203 (291)
T 3d6n_B 125 QHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSR-VFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGI 203 (291)
T ss_dssp BCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTTCH-HHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCCCc-hHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHh
Confidence 48778877653 236665333445555 311 11234566778899888877542110 12344566
Q ss_pred cCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccc-cccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 203 QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYF-NMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 203 ~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
+++|+|.. -|.| .|+.=+-..+ +..+|+ .--++.+.++..+ |=.|| ||++||-
T Consensus 204 ~~aDvvy~-~~~q-----~er~~~~~~~-------~~~~~~~~y~v~~~~l~~a~---i~mH~--lP~~Rg~ 257 (291)
T 3d6n_B 204 DWADVVIW-LRLQ-----KERQKENYIP-------SESSYFKQFGLTKERFEKVK---LYMHP--GPVNRNV 257 (291)
T ss_dssp HHCSEEEE-CCCC-----THHHHTTSSS-------CHHHHHHHHSBCHHHHTTCC---CEECS--SCCCBTT
T ss_pred CCCCEEEE-eCcc-----cCccccccch-------hHHHHHhhcCcCHHHHHhcc---cccCC--CCCCCCc
Confidence 78999999 6765 2331000000 111121 1257888887765 88999 9999983
No 228
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=33.36 E-value=93 Score=28.55 Aligned_cols=51 Identities=18% Similarity=0.113 Sum_probs=31.5
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEE
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHY 186 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~ 186 (306)
+.||+|.+.|. |.. ++..+.+- -..+|++|.... ......+++.+|++++-
T Consensus 2 ~irVgIiG~G~iG~~---~~r~l~~~-~~~elvav~d~~----~~~~~~~~~~~g~~~~~ 53 (334)
T 2czc_A 2 KVKVGVNGYGTIGKR---VAYAVTKQ-DDMELIGITKTK----PDFEAYRAKELGIPVYA 53 (334)
T ss_dssp CEEEEEECCSHHHHH---HHHHHHTC-TTEEEEEEEESS----CSHHHHHHHHTTCCEEE
T ss_pred CcEEEEEeEhHHHHH---HHHHHhcC-CCCEEEEEEcCC----HHHHHHHHHhcCccccc
Confidence 36999999865 233 33333221 137998887643 23456788889988653
No 229
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=33.32 E-value=1.3e+02 Score=28.24 Aligned_cols=55 Identities=9% Similarity=0.040 Sum_probs=28.4
Q ss_pred EEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 132 AVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 132 avl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
.||.-+. ++-+.-|..+++.|+ ...|.++= +++............++|||+.+++
T Consensus 124 ~ILTh~~S~tv~~~l~~A~~~gk-~~~V~v~E-srP~~qG~~la~~L~~~gI~vtli~ 179 (315)
T 3ecs_A 124 TILTHAYSRVVLRVLEAAVAAKK-RFSVYVTE-SQPDLSGKKMAKALCHLNVPVTVVL 179 (315)
T ss_dssp EEEECSCCHHHHHHHHHHHTTTC-CEEEEEEC-CTTTTHHHHHHHHHHTTTCCEEEEC
T ss_pred EEEEcCCcHHHHHHHHHHHHcCC-eEEEEEec-CCCcchHHHHHHHHHHcCCCEEEEe
Confidence 4444444 445544555555564 34543332 3322212233444567899999987
No 230
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=33.29 E-value=45 Score=30.11 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=20.2
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeC
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISN 164 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn 164 (306)
++.||+|++.|. |.. ++..++.- -..++++|+..
T Consensus 8 ~~irv~IIG~G~iG~~---~~~~l~~~-~~~elvav~d~ 42 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRY---ALQALREA-PDFEIAGIVRR 42 (304)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHHC-TTEEEEEEECC
T ss_pred CCCEEEEECChHHHHH---HHHHHhcC-CCCEEEEEEcC
Confidence 367999999875 232 23333321 13788887753
No 231
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=33.07 E-value=1.4e+02 Score=27.09 Aligned_cols=37 Identities=16% Similarity=-0.012 Sum_probs=25.7
Q ss_pred ecCCCCCceEEEEEeCCc--chHHHHHHhhhcCCCC-eEEEEEee
Q 021895 122 VPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLP-VEITCVIS 163 (306)
Q Consensus 122 l~~~~~~~riavl~S~~g--~~L~~ll~~~~~g~l~-~~I~~Vis 163 (306)
+.-....++|+||=||=| +.++.+++. +| .++.-+--
T Consensus 18 ~~~~~~~~~IgvfDSGvGGLtv~~~i~~~-----lP~e~~iy~~D 57 (274)
T 3uhf_A 18 LYFQSNAMKIGVFDSGVGGLSVLKSLYEA-----RLFDEIIYYGD 57 (274)
T ss_dssp CCCCCSCCEEEEEESSSTTHHHHHHHHHT-----TCCSEEEEEEC
T ss_pred eeccCCCCeEEEEECCCChHHHHHHHHHH-----CCCCCEEEEec
Confidence 344456779999999987 778877764 46 56655544
No 232
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=33.05 E-value=98 Score=25.69 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=38.4
Q ss_pred CCCCCceEEEEEeCCcchHHHHHHhh----hcCCC-CeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 124 DIDPKYKVAVLASKQEHCLVDFLYGW----QEGKL-PVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 124 ~~~~~~riavl~S~~g~~L~~ll~~~----~~g~l-~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
...+++=++=++...+.....+..++ ++-.+ +..|.++.|--.+......++.|+++|+|+..++
T Consensus 6 ~~~p~~lvvGIGcrrg~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 6 LPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLA 75 (145)
T ss_dssp CCCCCCEEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEEC
T ss_pred cccCCeEEEEEeeCCCCCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcEEeC
Confidence 44455555556666665444443333 22333 3556666554333234568899999999999975
No 233
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=33.01 E-value=1e+02 Score=26.93 Aligned_cols=111 Identities=9% Similarity=0.134 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhhhcccc-eeeecCCCCCceEEEEEeC--Cc-chHHHHHHhhhc--CCCCeEEEEEeeCCCCCCChhHHH
Q 021895 102 MDEDFFKLSKMFNAMRS-VVRVPDIDPKYKVAVLASK--QE-HCLVDFLYGWQE--GKLPVEITCVISNHDRGPNSHVIR 175 (306)
Q Consensus 102 LreaL~~la~elgl~~~-~~rl~~~~~~~riavl~S~--~g-~~L~~ll~~~~~--g~l~~~I~~Visn~~~~~~~~~~~ 175 (306)
-++...+.++++|-.-+ ..+-....++.+|+++... .. .-...++.++++ .+...++...-++.+.......++
T Consensus 34 tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~ 113 (338)
T 3dbi_A 34 TKDRVFQAVEESGYRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQ 113 (338)
T ss_dssp --------------------------CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcCHHHHHhhhCCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 34555555556552111 0111123456789999886 32 333444443321 112345543333332100112345
Q ss_pred HHHhCCCCEEEeCCCCCChHHHHHHHhcC--CcEEEEecc
Q 021895 176 FLERHGIPYHYLCAKENEREEELLELVQN--TDFLVLARY 213 (306)
Q Consensus 176 ~A~~~gIp~~~~~~k~~~~e~e~~~~v~~--~D~vVlA~y 213 (306)
.....++--..+...... ++++.+++++ .=+|++-+.
T Consensus 114 ~l~~~~vdgiIi~~~~~~-~~~~~~~~~~~~iPvV~~~~~ 152 (338)
T 3dbi_A 114 YLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRR 152 (338)
T ss_dssp HHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSCEEEESSC
T ss_pred HHHhCCCCEEEEeCCCCC-hHHHHHHHHcCCCCEEEEcCC
Confidence 556667766665422212 3345555542 234544433
No 234
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=32.65 E-value=79 Score=28.41 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=8.6
Q ss_pred CCCceEEEEEeCC
Q 021895 126 DPKYKVAVLASKQ 138 (306)
Q Consensus 126 ~~~~riavl~S~~ 138 (306)
.+++|+.|++-+.
T Consensus 6 ~~m~~~~vi~Np~ 18 (304)
T 3s40_A 6 TKFEKVLLIVNPK 18 (304)
T ss_dssp CSCSSEEEEECTT
T ss_pred CCCCEEEEEECcc
Confidence 3466888887653
No 235
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=32.32 E-value=28 Score=31.90 Aligned_cols=70 Identities=14% Similarity=0.037 Sum_probs=37.9
Q ss_pred CCceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 127 ~~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
+++||+|++.|. +. .+.+|. . .+ .+++++|.+.. .....++|++++.+..+- . -+++++. .
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~-~--~~--~~~l~av~d~~----~~~~~~~a~~~~~~~~~~-----~-~~~ll~~-~ 67 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLL-Q--MQ--DIRIVAACDSD----LERARRVHRFISDIPVLD-----N-VPAMLNQ-V 67 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHH-T--CT--TEEEEEEECSS----HHHHGGGGGTSCSCCEES-----S-HHHHHHH-S
T ss_pred CcceEEEECCCHHHHHHHHHHHH-h--CC--CcEEEEEEcCC----HHHHHHHHHhcCCCcccC-----C-HHHHhcC-C
Confidence 367999999997 32 233332 1 11 37888877543 123455666665443331 1 1233321 1
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 68 ~vD~V~i~t 76 (359)
T 3m2t_A 68 PLDAVVMAG 76 (359)
T ss_dssp CCSEEEECS
T ss_pred CCCEEEEcC
Confidence 678888863
No 236
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=32.30 E-value=2.2e+02 Score=25.64 Aligned_cols=53 Identities=6% Similarity=0.023 Sum_probs=32.6
Q ss_pred CCceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 127 PKYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 127 ~~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
+++||+++..+. || .+.+|..++++- .++|+.+.+.. ..+..+..|++++.++
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~-------~~~~~~~~g~~~~~~~ 66 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDE-------FAAQVKAAGATPVVYD 66 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGG-------GHHHHHHHTCEEEECC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEecC
Confidence 457899876654 43 344555555432 37888665432 2456677798887665
No 237
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=32.21 E-value=63 Score=27.56 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=62.9
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceeee
Q 021895 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRV 122 (306)
Q Consensus 43 ~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~rl 122 (306)
-|+-+.|...... +.+.|.++|+++.++..|... .+ ..+.+++.+.+.. .
T Consensus 122 ~vL~~rg~~~r~~---l~~~L~~~G~~v~~~~~Y~~~------------~~--~~~~~~~~~~l~~--~----------- 171 (240)
T 3mw8_A 122 QIVIVRGKGGREA---MADGLRLRGANVSYLEVYQRA------------CP--PLDAPASVSRWQS--F----------- 171 (240)
T ss_dssp EEEEEEESSSCCH---HHHHHHHTTCEEEEEEEEEEE------------CC--CCCHHHHHHHHHH--H-----------
T ss_pred EEEEEeCCCcHHH---HHHHHHHCCCEEEEEEEEEee------------CC--CCCHHHHHHHHHh--C-----------
Confidence 4566777776664 455899999999998876431 11 2244555554432 0
Q ss_pred cCCCCCceEEEEEeCCcchHHHHHHhhhcC---CCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH
Q 021895 123 PDIDPKYKVAVLASKQEHCLVDFLYGWQEG---KLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (306)
Q Consensus 123 ~~~~~~~riavl~S~~g~~L~~ll~~~~~g---~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~ 199 (306)
..-+++|.|++ .++.++...... .+.....++|+.. ..+.++++|+...+++.+ ...+.++
T Consensus 172 -----~~d~v~ftS~s--~v~~~~~~~~~~~~~~l~~~~~~aiG~~-------ta~~l~~~G~~~~~va~~--p~~~~ll 235 (240)
T 3mw8_A 172 -----GIDTIVVTSGE--VLENLINLVPKDSFAWLRDCHIIVPSAR-------VETQARKKGLRRVTNAGA--ANQAAVL 235 (240)
T ss_dssp -----TCCEEECCSHH--HHHHHHHHSCGGGHHHHHHSEEEESSHH-------HHHHHHHTTCCCEEECSS--SSHHHHH
T ss_pred -----CCCEEEEcCHH--HHHHHHHHcchHHHHHHhCCCEEEECHH-------HHHHHHHcCCCceEeCCC--CCHHHHH
Confidence 11255666665 344444432211 0111223444443 678889999987776632 2345666
Q ss_pred HHh
Q 021895 200 ELV 202 (306)
Q Consensus 200 ~~v 202 (306)
+.+
T Consensus 236 ~al 238 (240)
T 3mw8_A 236 DAL 238 (240)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 238
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.89 E-value=1.9e+02 Score=25.32 Aligned_cols=75 Identities=4% Similarity=-0.103 Sum_probs=39.6
Q ss_pred CceEEEEEeCC--cc-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHh-------CCCCEEEeCCCCCChHHH
Q 021895 128 KYKVAVLASKQ--EH-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLER-------HGIPYHYLCAKENEREEE 197 (306)
Q Consensus 128 ~~riavl~S~~--g~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~-------~gIp~~~~~~k~~~~e~e 197 (306)
++||.|.+... |. ....|+. .| .+|.++.-+.+ +........+. .++.+...+. ...+.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~---~g---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d~~~ 93 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLK---LN---QVVIGLDNFST--GHQYNLDEVKTLVSTEQWSRFCFIEGDI---RDLTT 93 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEECCSS--CCHHHHHHHHHTSCHHHHTTEEEEECCT---TCHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---CC---CEEEEEeCCCC--CchhhhhhhhhccccccCCceEEEEccC---CCHHH
Confidence 45666665433 23 3334443 34 67776654432 12222232332 4666666542 22456
Q ss_pred HHHHhcCCcEEEEecc
Q 021895 198 LLELVQNTDFLVLARY 213 (306)
Q Consensus 198 ~~~~v~~~D~vVlA~y 213 (306)
+.++++++|+||-+..
T Consensus 94 ~~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHHTTTCSEEEECCC
T ss_pred HHHHhcCCCEEEECCc
Confidence 7777789999986554
No 239
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=31.73 E-value=3.1e+02 Score=25.64 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=45.2
Q ss_pred CCCCceEEEEEeCCc-----chHHHHHHh--hhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHH
Q 021895 125 IDPKYKVAVLASKQE-----HCLVDFLYG--WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEE 197 (306)
Q Consensus 125 ~~~~~riavl~S~~g-----~~L~~ll~~--~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e 197 (306)
.++++||+++.+.-. +.+..++.. .... ..+|.++....+. .....+..+..+ ++..+.. ....+
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~---~~~~~ 273 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQP--DLQMHLFATSGDD--GSTLRTRLAQAS-TLHDVTA---LGHLA 273 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCT--TEEEEEEESSCCC--SCHHHHHHHHTS-EEEECTT---CCHHH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcc--cEEEEEEECCCCC--ccHHHHHHHhcC-eEEECCC---CCHHH
Confidence 356789999987642 345556665 3332 4788766544321 223444556666 4443331 12345
Q ss_pred HHHHhc--CCcEEEEe
Q 021895 198 LLELVQ--NTDFLVLA 211 (306)
Q Consensus 198 ~~~~v~--~~D~vVlA 211 (306)
+.+.++ ++|+|+..
T Consensus 274 l~~~i~~~~~Div~~~ 289 (568)
T 2vsy_A 274 TAKHIRHHGIDLLFDL 289 (568)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHhCCCCEEEEC
Confidence 667775 89999854
No 240
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=31.68 E-value=1.9e+02 Score=26.92 Aligned_cols=114 Identities=18% Similarity=0.186 Sum_probs=68.0
Q ss_pred cchHHHHHHhh----hcCCCC-eEEEEEeeCCCCCCC----hhHHHHHHhCCCCEEEeCCCCCCh-------HHHHHHHh
Q 021895 139 EHCLVDFLYGW----QEGKLP-VEITCVISNHDRGPN----SHVIRFLERHGIPYHYLCAKENER-------EEELLELV 202 (306)
Q Consensus 139 g~~L~~ll~~~----~~g~l~-~~I~~Visn~~~~~~----~~~~~~A~~~gIp~~~~~~k~~~~-------e~e~~~~v 202 (306)
.|..|+|+|-. ..|.+. ..|+ .|..- .+ ...+..+...|+.+.+++.++-.. ...+.+.+
T Consensus 126 ~HPtQaLaDl~Ti~e~~g~l~glkva-~vGD~---~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav 201 (304)
T 3r7f_A 126 QHPTQSLLDLMTIYEEFNTFKGLTVS-IHGDI---KHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAV 201 (304)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTCEEE-EESCC---TTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCCCCCEEE-EEcCC---CCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHh
Confidence 47778777642 136664 3443 34332 11 134566778899888876432110 12345566
Q ss_pred cCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCcccccc-ccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 203 QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFN-MILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 203 ~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
+++|+|..-++ |+|++=+ .-+..+|+. -.+..+.++..+.+.|=.|| ||++||-
T Consensus 202 ~~aDvvyt~~~------q~er~~~---------~~~~~~~~~~y~v~~~~l~~a~~~ai~mHc--lP~~Rg~ 256 (304)
T 3r7f_A 202 ESSDVVMLLRI------QNERHQS---------AVSQEGYLNKYGLTVERAERMKRHAIIMHP--APVNRGV 256 (304)
T ss_dssp HHCSEEEECCC------CTTTCCS---------SCCSTTHHHHHSBCHHHHTTSCTTCEEECC--SCCCBTT
T ss_pred CCCCEEEeccc------hhhcccc---------chhHHHHhCCCccCHHHHhhcCCCCEEECC--CCCCCCc
Confidence 78999988764 3454311 002233332 35899999988889999999 5899883
No 241
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=31.60 E-value=40 Score=28.86 Aligned_cols=69 Identities=16% Similarity=0.227 Sum_probs=39.6
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCCh-hHHHHHHhCCCCEEEeC-CCCCChH---HHHHHHh
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENERE---EELLELV 202 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~-~~~~~A~~~gIp~~~~~-~k~~~~e---~e~~~~v 202 (306)
++|++|+.+|. .++. |+. .| .|+ .+.+++++.|+.+.... -+++ .+ +.+.+.+
T Consensus 3 ~~~v~IistGd-----Ell~----G~i----------~D--tN~~~l~~~L~~~G~~v~~~~iv~Dd-~~~I~~~l~~a~ 60 (172)
T 3kbq_A 3 AKNASVITVGN-----EILK----GRT----------VN--TNAAFIGNFLTYHGYQVRRGFVVMDD-LDEIGWAFRVAL 60 (172)
T ss_dssp -CEEEEEEECH-----HHHT----TSS----------CC--HHHHHHHHHHHHTTCEEEEEEEECSC-HHHHHHHHHHHH
T ss_pred CCEEEEEEEcc-----cccC----CcE----------Ee--HHHHHHHHHHHHCCCEEEEEEEeCCC-HHHHHHHHHHHH
Confidence 57999999986 3332 321 11 233 45677888998765443 1221 12 2333444
Q ss_pred cCCcEEEEeccCCCCc
Q 021895 203 QNTDFLVLARYMQPVP 218 (306)
Q Consensus 203 ~~~D~vVlA~ym~~~~ 218 (306)
.++|+|++.|=.-|.+
T Consensus 61 ~~~DlVittGG~g~~~ 76 (172)
T 3kbq_A 61 EVSDLVVSSGGLGPTF 76 (172)
T ss_dssp HHCSEEEEESCCSSST
T ss_pred hcCCEEEEcCCCcCCc
Confidence 4799999998666443
No 242
>1uv7_A General secretion pathway protein M; transport; HET: MSE; 1.7A {Vibrio cholerae} SCOP: d.67.4.1
Probab=31.13 E-value=2e+02 Score=22.79 Aligned_cols=64 Identities=5% Similarity=0.021 Sum_probs=46.7
Q ss_pred CccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceeeecC
Q 021895 51 DEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPD 124 (306)
Q Consensus 51 DRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~rl~~ 124 (306)
+...+-..|++...++|+.|..++. .|. . +.|.++ ++++++|-.=|+.+.++.|+.-....+..
T Consensus 21 ~~~~L~~~v~~Sa~~~gL~i~R~qp-----~g~-~--vqV~l~--~v~F~~L~~WL~~L~~~~Gv~v~~l~l~~ 84 (110)
T 1uv7_A 21 SDQPLNQVITNSTRQFNIELIRVQP-----RGE-M--MQVWIQ--PLPFSQLVSWIAYLQERQGVSVDAIDIDR 84 (110)
T ss_dssp --CCHHHHHHHHHHHHTCCEEEEEE-----CSS-E--EEEEEC--CBCHHHHHHHHHHHHHHSCCEEEEEEEEE
T ss_pred CCccHHHHHHHHHHHCCCeEEEecC-----CCC-E--EEEEEC--CCCHHHHHHHHHHHHHhcCceEEEEEEee
Confidence 4566888999999999999988877 344 4 445544 46899999999999999886544444443
No 243
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=30.67 E-value=95 Score=25.61 Aligned_cols=81 Identities=16% Similarity=0.131 Sum_probs=45.6
Q ss_pred ceEEEEEeCCc---chHHHHHHhhhcC-CCC--eEEE-EEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH
Q 021895 129 YKVAVLASKQE---HCLVDFLYGWQEG-KLP--VEIT-CVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEELL 199 (306)
Q Consensus 129 ~riavl~S~~g---~~L~~ll~~~~~g-~l~--~~I~-~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~ 199 (306)
+||.|+.+|+- .-.++++...... .|. .+|. +-++. + ..+++..+++.++++||+......+.-+ +
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar~l~--~--- 76 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSKKLT--Q--- 76 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCCBCC--H---
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccccCC--H---
Confidence 48999989885 3445555543221 122 3442 22222 2 1236678899999999987543222211 1
Q ss_pred HHhcCCcEEEEeccC
Q 021895 200 ELVQNTDFLVLARYM 214 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym 214 (306)
+.+.+.|+|+...-.
T Consensus 77 ~d~~~~DlIi~Md~~ 91 (156)
T 2gi4_A 77 KLCDESDFLITMDNS 91 (156)
T ss_dssp HHHTTCSEEECCCHH
T ss_pred HHhccCCEEEEECCh
Confidence 123489999987543
No 244
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=30.35 E-value=69 Score=26.16 Aligned_cols=76 Identities=12% Similarity=-0.019 Sum_probs=49.3
Q ss_pred CeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEE
Q 021895 82 NVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCV 161 (306)
Q Consensus 82 G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~V 161 (306)
....+.++|. + .+.---+|.-...+|.++|+..|..++.| - +|-+.+.|+...+.+|++.+++|.-.+.|.-|
T Consensus 32 di~t~~frV~--G-~VQGVGFR~~v~~~A~~lgL~G~VrN~~d--G--~Vei~~eG~~~~v~~f~~~l~~gPp~A~V~~v 104 (121)
T 2lxf_A 32 DVTTLCYRVT--G-KVQGVFFRKYTKKEADALSLVGYVTNNED--G--SVSGVVQGPKEQVDAFVKYLHKGSPKSVVKKV 104 (121)
T ss_dssp TEEEEEEEEE--E-CTTCCCCHHHHHHHHHHHTCEEEEEECTT--S--CEEEEEEEEHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CEEEEEEEEE--E-eeCCcCchHHHHHHHHHcCCEEEEEECCC--C--CEEEEEEECHHHHHHHHHHHHhCCCCCEEEEE
Confidence 4455444443 2 22223357778888999998876433333 2 47778888888999999998887433777666
Q ss_pred eeC
Q 021895 162 ISN 164 (306)
Q Consensus 162 isn 164 (306)
-..
T Consensus 105 ~~~ 107 (121)
T 2lxf_A 105 SIH 107 (121)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 245
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=30.19 E-value=2.1e+02 Score=22.77 Aligned_cols=98 Identities=12% Similarity=-0.022 Sum_probs=56.6
Q ss_pred ccCCCCCCcccEEEEEEcCC-ccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHH
Q 021895 32 IESSVSPTLTHGIHVFHCPD-EVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (306)
Q Consensus 32 ~~~~~~p~~~k~ILTViGpD-RpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la 110 (306)
++.+.++...+.||-++|-- ....-..+...|+++|.+++-.+.-.......- +....+.+++.+++.++.
T Consensus 3 ~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~--------~~~~~~~~~~~~~~~~~l 74 (267)
T 3sty_A 3 MEKSMSPFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQ--------ALQIPNFSDYLSPLMEFM 74 (267)
T ss_dssp -------CCCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCC--------GGGCCSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCc--------CCccCCHHHHHHHHHHHH
Confidence 44556666778899999854 344556788889999999998887432111110 111246777777777766
Q ss_pred hhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhh
Q 021895 111 KMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQ 150 (306)
Q Consensus 111 ~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~ 150 (306)
+.++ ...++.+++-.-|..+ ++..+.+
T Consensus 75 ~~l~------------~~~~~~lvGhS~Gg~i-a~~~a~~ 101 (267)
T 3sty_A 75 ASLP------------ANEKIILVGHALGGLA-ISKAMET 101 (267)
T ss_dssp HTSC------------TTSCEEEEEETTHHHH-HHHHHHH
T ss_pred HhcC------------CCCCEEEEEEcHHHHH-HHHHHHh
Confidence 5542 2347888887777444 3333333
No 246
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=30.07 E-value=2.8e+02 Score=25.75 Aligned_cols=71 Identities=18% Similarity=0.304 Sum_probs=37.0
Q ss_pred hhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCcccc-ccccCCH
Q 021895 171 SHVIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY-FNMILSG 249 (306)
Q Consensus 171 ~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~il~~ 249 (306)
..+.+.|++.|..+..... +.+.++++|+|..-+| |+||| ..+ . ...+ ..-.+..
T Consensus 196 ~~~~~~~~~~g~~~~~~~d--------~~eav~~aDvvyt~~~------q~er~-~~~---~------~~~~~~~y~v~~ 251 (310)
T 3csu_A 196 QYILDMLDEKGIAWSLHSS--------IEEVMAEVDILYMTRV------QKERL-DPS---E------YANVKAQFVLRA 251 (310)
T ss_dssp HHHHHHHHHTTCCEEECSC--------GGGTTTTCSEEEECC---------------------------------CCBCG
T ss_pred HHHHHHHHHcCCeEEEEcC--------HHHHhcCCCEEEECCc------ccccc-CHH---H------HHHHhhccCCCH
Confidence 3455666666665544321 1234568999999888 45553 110 0 0000 1125788
Q ss_pred hHHhhcCCCeeEeCCC
Q 021895 250 KFLRSYGKDVINIHHG 265 (306)
Q Consensus 250 ~~l~~~~~~iINiHps 265 (306)
+.++..+.++|=.||.
T Consensus 252 ~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 252 SDLHNAKANMKVLHPL 267 (310)
T ss_dssp GGGTTCCTTCEEECCS
T ss_pred HHHhhcCCCCEEECCC
Confidence 8888888889999973
No 247
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=29.92 E-value=68 Score=31.34 Aligned_cols=58 Identities=14% Similarity=0.104 Sum_probs=38.6
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC-ChhHHHHHHhCCC-CEEEeCC
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGI-PYHYLCA 189 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~-~~~~~~~A~~~gI-p~~~~~~ 189 (306)
-|.||+|+.||.- +.+..+|. ++| .+|.+|..+-.... -..+.+.|++.|| |.++++.
T Consensus 13 ~~~KVVVA~SGGlDSSv~a~~Lk--e~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl 74 (421)
T 1vl2_A 13 MKEKVVLAYSGGLDTSVILKWLC--EKG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDL 74 (421)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHH--HTT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEEC
T ss_pred ccCCEEEEeCCcHHHHHHHHHHH--HCC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEec
Confidence 4679999999974 34434443 234 68888776642211 2467889999999 8888764
No 248
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=29.82 E-value=41 Score=28.19 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=39.7
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCCh-hHHHHHHhCCCCEEEeC-CCCCChH--HHHHHHh
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENERE--EELLELV 202 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~-~~~~~A~~~gIp~~~~~-~k~~~~e--~e~~~~v 202 (306)
+++|++|+.+|++. |+ +-| .|+ .+.++.+++|+.+.... -+++..+ +.+.+.+
T Consensus 9 ~~~~v~Ii~tGdE~-----------g~--------i~D----~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~ 65 (172)
T 1mkz_A 9 IPTRIAILTVSNRR-----------GE--------EDD----TSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWI 65 (172)
T ss_dssp CCCEEEEEEECSSC-----------CG--------GGC----HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeCCC-----------Cc--------ccC----ccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHH
Confidence 56799999999861 21 111 232 45667788887654432 1222111 3444445
Q ss_pred cC--CcEEEEeccCCCC
Q 021895 203 QN--TDFLVLARYMQPV 217 (306)
Q Consensus 203 ~~--~D~vVlA~ym~~~ 217 (306)
++ +|+|+..|=.-|.
T Consensus 66 ~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 66 ASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HSSSCCEEEEESCCSSS
T ss_pred hcCCCCEEEeCCCCCCC
Confidence 44 9999999876543
No 249
>3bbn_F Ribosomal protein S6; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=29.78 E-value=2.1e+02 Score=24.74 Aligned_cols=63 Identities=11% Similarity=0.163 Sum_probs=42.9
Q ss_pred cE-EEEEEcCC-----ccchHHHHHHHHHhcCCeEeEeeeec--------cCC----------CCeEEEEEEEEeCCCCC
Q 021895 42 HG-IHVFHCPD-----EVGIVAKLSECIASRGGNILAADVFV--------PEK----------KNVFYSRSEFIFDPIKW 97 (306)
Q Consensus 42 k~-ILTViGpD-----RpGIVAaVS~~LAe~G~NIlD~sQ~i--------d~l----------~G~FfMrmeVdv~~~~~ 97 (306)
+| ++.+.=|| ...+|..+.+.|.++|+.|.+++.-. ... .|.|+ .+.|+.++.
T Consensus 64 ~YE~m~IlrPdl~eeev~alver~~~iI~~~GG~I~~ve~WG~RrLAY~IkK~~kgg~~~~h~eG~Yv-lm~F~a~p~-- 140 (168)
T 3bbn_F 64 QYETMAVLRPDMTEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYL-LFTYFTKPE-- 140 (168)
T ss_dssp EEEEEEEECTTSCHHHHHSTTHHHHHHHTTTSCEEEEEEEEEECCCSSCTTSCSSSCSSCCCCCCEEE-EEEEEECTT--
T ss_pred ceeEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEecccccccceeccCcccccccccceEEEE-EEEEEeCHH--
Confidence 44 55555666 45889999999999999999987643 111 36655 666776542
Q ss_pred CHHHHHHHHH
Q 021895 98 PREQMDEDFF 107 (306)
Q Consensus 98 ~~eeLreaL~ 107 (306)
..++|.+.|.
T Consensus 141 ~I~ELeR~Lr 150 (168)
T 3bbn_F 141 SISPLEAALV 150 (168)
T ss_dssp SSHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 4677777664
No 250
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=29.78 E-value=43 Score=29.45 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=34.9
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
+++||+|++.|. |..+...|.. .| .+|++ .+++ ....+.+.+.|+... . ...+.++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~--~G---~~V~~--~d~~----~~~~~~~~~~g~~~~------~----~~~~~~~~a 60 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLK--AG---YLLNV--FDLV----QSAVDGLVAAGASAA------R----SARDAVQGA 60 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHH--TT---CEEEE--ECSS----HHHHHHHHHTTCEEC------S----SHHHHHTTC
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CC---CeEEE--EcCC----HHHHHHHHHCCCeEc------C----CHHHHHhCC
Confidence 357999999987 4444443332 23 46543 3542 123444455565321 1 122345689
Q ss_pred cEEEEe
Q 021895 206 DFLVLA 211 (306)
Q Consensus 206 D~vVlA 211 (306)
|+|+++
T Consensus 61 Dvvi~~ 66 (302)
T 2h78_A 61 DVVISM 66 (302)
T ss_dssp SEEEEC
T ss_pred CeEEEE
Confidence 999997
No 251
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=29.57 E-value=69 Score=27.29 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=35.0
Q ss_pred ceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC---ChhHHHHHHhCCCC-EEEeC
Q 021895 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIP-YHYLC 188 (306)
Q Consensus 129 ~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~---~~~~~~~A~~~gIp-~~~~~ 188 (306)
.|++|+.||.- +.+..++. +.+ .+|.+|..++.... -..+.+.|++.||| +++++
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~--~~~---~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~ 63 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQAL--QDY---DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLD 63 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHH--HHC---SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCEEEEecCcHHHHHHHHHHH--HcC---CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 48999999964 33333333 234 47777776653211 12567788999999 88776
No 252
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=29.50 E-value=2.1e+02 Score=24.04 Aligned_cols=98 Identities=15% Similarity=0.050 Sum_probs=56.3
Q ss_pred HHHHHhCCCCEEEeCCCCCChHHHHHHHhc-CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCC-CccccccccCCHhH
Q 021895 174 IRFLERHGIPYHYLCAKENEREEELLELVQ-NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKG-SLTSYFNMILSGKF 251 (306)
Q Consensus 174 ~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~-~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~il~~~~ 251 (306)
.+.++..|+++...-..+ ...+++.+. + ++|+||+..-.+ + ++...+-.=.+..+
T Consensus 80 ~~~~~~~g~~~~~~~~~g-~~~~~I~~~-~~~~dliV~G~~g~---------------------~~~~~~~~~Gs~~~~v 136 (268)
T 3ab8_A 80 RQSALAAGVAVEAVLEEG-VPHEAILRR-ARAADLLVLGRSGE---------------------AHGDGFGGLGSTADRV 136 (268)
T ss_dssp HHHHHHTTCCEEEEEEEE-CHHHHHHHH-HTTCSEEEEESSCT---------------------TSCTTCCSCCHHHHHH
T ss_pred HHHHHhCCCCeEEEEecC-CHHHHHHhh-ccCCCEEEEeccCC---------------------CccccccccchhHHHH
Confidence 344667888876543222 234567777 5 999999987665 2 22222222234667
Q ss_pred HhhcCCCeeEeCCCCCC------CCCCCcHHHHHHHHHhhc----Cceeeeec
Q 021895 252 LRSYGKDVINIHHGLLP------SFKGGKPAKQVGCFTFCL----GNLITILS 294 (306)
Q Consensus 252 l~~~~~~iINiHpsLLP------~f~Ga~p~~~A~~~~~~l----~~~~~~~~ 294 (306)
++.-+.+++=+++..-+ +++|.....+|+.....+ |.-++++.
T Consensus 137 ~~~a~~PVlvv~~~~~~~~~ilv~~d~s~~~~~al~~a~~la~~~~a~l~ll~ 189 (268)
T 3ab8_A 137 LRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARALGLGVRVVS 189 (268)
T ss_dssp HHHCSSCEEEECSSCCCCCEEEEECCSCHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHhCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHhhhcCCCEEEEEE
Confidence 77777777777654321 356766666665554333 44455553
No 253
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=29.43 E-value=2.4e+02 Score=25.30 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=31.9
Q ss_pred CceEEEEEeCC-cc--hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQ-EH--CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~-g~--~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
++||+++..+. || .+.+|..++++- .++|+.+.+.. ..+..+..|++++.++
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~-------~~~~~~~~g~~~~~~~ 61 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV-------FADKVAATGPRPVLYH 61 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG-------GHHHHHTTSCEEEECC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH-------HHHHHHhCCCEEEEcC
Confidence 46899876554 33 345666665542 47887665433 2455677898887765
No 254
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=29.42 E-value=1.8e+02 Score=24.26 Aligned_cols=132 Identities=21% Similarity=0.301 Sum_probs=74.3
Q ss_pred cEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccC-----------CCCeEEEEEEEEeCCCCCCHHHHHHHHHHHH
Q 021895 42 HGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPE-----------KKNVFYSRSEFIFDPIKWPREQMDEDFFKLS 110 (306)
Q Consensus 42 k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~-----------l~G~FfMrmeVdv~~~~~~~eeLreaL~~la 110 (306)
.-|..+...| |-|...|-..+..+|+.++=+-.-.+. .+|. .+.. -.+.+.+++.+.++-
T Consensus 2 sqifvvfssd-peilkeivreikrqgvrvvllysdqdekrrrerleefekqgv-----dvrt---vedkedfrenireiw 72 (162)
T 2l82_A 2 SQIFVVFSSD-PEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGV-----DVRT---VEDKEDFRENIREIW 72 (162)
T ss_dssp CEEEEEEESC-HHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTC-----EEEE---CCSHHHHHHHHHHHH
T ss_pred ceEEEEecCC-HHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCC-----ceee---eccHHHHHHHHHHHH
Confidence 3455555555 779999999999999887654221110 0111 1111 124566666665543
Q ss_pred hhhhcccceeeecCCCCCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCC
Q 021895 111 KMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 111 ~elgl~~~~~rl~~~~~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~ 189 (306)
+++ +..-++|+++... .-+.++++..++. .+++..|..|.|+...-.+.+--+.-|+.+..++.
T Consensus 73 ery-------------pqldvvvivttddkewikdfieeaker--gvevfvvynnkdddrrkeaqqefrsdgvdvrtvsd 137 (162)
T 2l82_A 73 ERY-------------PQLDVVVIVTTDDKEWIKDFIEEAKER--GVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSD 137 (162)
T ss_dssp HHC-------------TTCCEEEEEECCCHHHHHHHHHHHHHT--TCEEEEEEECSCHHHHHHHHHHHCCSSCEEEEESS
T ss_pred HhC-------------CCCcEEEEEecCcHHHHHHHHHHHHhc--CcEEEEEecCCCchhHHHHHHHhhhcCceeeecCC
Confidence 332 3456777777665 5677888776654 47888787777542111122223455787777653
Q ss_pred CCCChHHHHHHHh
Q 021895 190 KENEREEELLELV 202 (306)
Q Consensus 190 k~~~~e~e~~~~v 202 (306)
.+++.+++
T Consensus 138 -----keelieqv 145 (162)
T 2l82_A 138 -----KEELIEQV 145 (162)
T ss_dssp -----HHHHHHHH
T ss_pred -----HHHHHHHH
Confidence 24555555
No 255
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=29.17 E-value=1.4e+02 Score=28.69 Aligned_cols=60 Identities=22% Similarity=0.250 Sum_probs=37.9
Q ss_pred CCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHH----H
Q 021895 125 IDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELL----E 200 (306)
Q Consensus 125 ~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~----~ 200 (306)
.-++.||||+++..-..|.+.|.. .+.++||...+.....+..-++++ +
T Consensus 19 ~~~~~riavlg~~T~~~l~~~l~~---------------------------~~~~~g~~~~~~~~~y~~~~~~ll~~~s~ 71 (387)
T 3nvb_A 19 SLPKLKVALLGDTATQLLATAIKG---------------------------EGILRNYNIELWEAEYNQVERQIMDPTSD 71 (387)
T ss_dssp SSCEEEEEEEESSCCHHHHHHHHH---------------------------HHHHTTCEEEEEECCTTCHHHHHHCTTSH
T ss_pred CCceEEEEEeccchHHHHHHHHHH---------------------------HHHHCCCcceEEEcCcchHHHHHhCCcch
Confidence 346789999999886666666543 345777765554433344434443 2
Q ss_pred Hhc-CCcEEEEe
Q 021895 201 LVQ-NTDFLVLA 211 (306)
Q Consensus 201 ~v~-~~D~vVlA 211 (306)
+.+ +||+++++
T Consensus 72 l~~~~pd~v~~~ 83 (387)
T 3nvb_A 72 YYQFEPDYTIIF 83 (387)
T ss_dssp HHHHCCSEEEEE
T ss_pred hhhcCCCEEEEE
Confidence 333 89999985
No 256
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=28.82 E-value=1.5e+02 Score=25.74 Aligned_cols=59 Identities=14% Similarity=0.030 Sum_probs=37.7
Q ss_pred CceEEEEEeCCc-c-hHHHHHHhhhcCCCCeEEEEEeeCCCCC-CChhHHHHHHhCCCCEEEeCC
Q 021895 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 128 ~~riavl~S~~g-~-~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~~~~~~~A~~~gIp~~~~~~ 189 (306)
..+|+|..||.- + .+..++.... | +.++.+|..++... .-..+.+.|+..|||+++++.
T Consensus 22 ~~~vvv~lSGGiDSs~~~~l~~~~~-g--~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~i 83 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKAL-G--KEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVINI 83 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHH-C--GGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHhc-C--CCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 347999999964 3 3334443321 2 24677887776321 123578889999999998873
No 257
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=28.74 E-value=59 Score=24.54 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=25.8
Q ss_pred HHHHHHhCCCCEE-EeCCCCCChHHHHHHHhc--CCcEEEEeccCC
Q 021895 173 VIRFLERHGIPYH-YLCAKENEREEELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 173 ~~~~A~~~gIp~~-~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~ 215 (306)
..+++++.|+++. ..-. .....+++.+..+ ++|+||+... +
T Consensus 69 l~~~~~~~~~~~~~~~~~-~g~~~~~I~~~a~~~~~dliV~G~~-~ 112 (141)
T 1jmv_A 69 LLDLAESVDYPISEKLSG-SGDLGQVLSDAIEQYDVDLLVTGHH-Q 112 (141)
T ss_dssp HHHHHHHSSSCCCCEEEE-EECHHHHHHHHHHHTTCCEEEEEEC-C
T ss_pred HHHHHHHcCCCceEEEEe-cCCHHHHHHHHHHhcCCCEEEEeCC-C
Confidence 3455677888751 1111 1223467777776 7999999877 6
No 258
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=28.61 E-value=94 Score=26.31 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=32.6
Q ss_pred HHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcEEEEec--cCCCCcCchhhhhhh
Q 021895 174 IRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLAR--YMQPVPLQKEAYLGY 227 (306)
Q Consensus 174 ~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~vVlA~--ym~~~~~~~~~~~~~ 227 (306)
.+.+++.|..+.+++..+...-+++.+.+.++|.||++- |.--+|-+=-.|+|.
T Consensus 40 ~~~~~~~g~~v~~~dL~~~~d~~~~~~~l~~AD~iV~~~P~y~~s~pa~LK~~iDr 95 (204)
T 2amj_A 40 DGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDD 95 (204)
T ss_dssp HHHHHHTTCEEEEEESSSCCCHHHHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEeCCccccHHHHHHHHHhCCEEEEECCccccCCCHHHHHHHHH
Confidence 444555566666655322222245667777999999985 434456666677774
No 259
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=28.56 E-value=42 Score=30.06 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=35.4
Q ss_pred CCCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcC
Q 021895 126 DPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 126 ~~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~ 204 (306)
..++||+|++.|. |..+...|.. .| .+|++ .|++. .. .+.+.+.|+.+ . .. ..+.+.+
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~--~G---~~V~~--~dr~~---~~-~~~l~~~g~~~--~-----~~---~~~~~~~ 77 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLK--NG---FKVTV--WNRTL---SK-CDELVEHGASV--C-----ES---PAEVIKK 77 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH--TT---CEEEE--ECSSG---GG-GHHHHHTTCEE--C-----SS---HHHHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHH--CC---CeEEE--EeCCH---HH-HHHHHHCCCeE--c-----CC---HHHHHHh
Confidence 4467999999986 4555444432 34 46543 45531 22 33444666532 1 11 2233457
Q ss_pred CcEEEEe
Q 021895 205 TDFLVLA 211 (306)
Q Consensus 205 ~D~vVlA 211 (306)
+|+|+++
T Consensus 78 aDvvi~~ 84 (310)
T 3doj_A 78 CKYTIAM 84 (310)
T ss_dssp CSEEEEC
T ss_pred CCEEEEE
Confidence 8999986
No 260
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=28.52 E-value=2.6e+02 Score=23.57 Aligned_cols=70 Identities=10% Similarity=0.050 Sum_probs=44.2
Q ss_pred cccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeecc----------CC-CCeEEEEEEEEeCCCCCCHHHHHHHHHH
Q 021895 40 LTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVP----------EK-KNVFYSRSEFIFDPIKWPREQMDEDFFK 108 (306)
Q Consensus 40 ~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id----------~l-~G~FfMrmeVdv~~~~~~~eeLreaL~~ 108 (306)
...-++.|+|.-..||=.+++..|+++|.+++=+..... .. .+.+. .+..|+. +.+++++.+++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dl~----~~~~v~~~~~~ 94 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVE-AVVCDVT----STEAVDALITQ 94 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEE-EEECCTT----CHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceE-EEEeCCC----CHHHHHHHHHH
Confidence 334466677875457778999999999999876532110 11 12222 3444543 57888888888
Q ss_pred HHhhhh
Q 021895 109 LSKMFN 114 (306)
Q Consensus 109 la~elg 114 (306)
+.++++
T Consensus 95 ~~~~~g 100 (266)
T 3o38_A 95 TVEKAG 100 (266)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 777665
No 261
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=28.45 E-value=1.3e+02 Score=26.44 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=37.6
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCC---ChhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGP---NSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~---~~~~~~~A~~~gIp~~~~~ 188 (306)
..+|+|..||.- +.+..++.... +.++.+|..++...+ -..+.+.|+..|||+++++
T Consensus 25 ~~~vvv~lSGGiDSsv~~~l~~~~~----~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~ 86 (268)
T 1xng_A 25 FKKVVYGLSGGLDSAVVGVLCQKVF----KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYS 86 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHH----GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEccCcHHHHHHHHHHHHhC----CCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 347999999964 33444443322 346888877763211 1357788999999999987
No 262
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=28.42 E-value=1.1e+02 Score=27.79 Aligned_cols=9 Identities=44% Similarity=0.519 Sum_probs=4.3
Q ss_pred CCcEEEEec
Q 021895 204 NTDFLVLAR 212 (306)
Q Consensus 204 ~~D~vVlA~ 212 (306)
++|+||.+|
T Consensus 80 ~~d~vvv~G 88 (337)
T 2qv7_A 80 NYDVLIAAG 88 (337)
T ss_dssp TCSEEEEEE
T ss_pred CCCEEEEEc
Confidence 345555443
No 263
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=27.64 E-value=89 Score=26.07 Aligned_cols=81 Identities=20% Similarity=0.286 Sum_probs=49.9
Q ss_pred eEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChH--HHHHHHhcCCcE
Q 021895 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENERE--EELLELVQNTDF 207 (306)
Q Consensus 130 riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e--~e~~~~v~~~D~ 207 (306)
.|-|..|....-|..+...++.. .+.+++..|+.|.-....-++--++.|+.+..+..|+.-+| .++++...+.|+
T Consensus 3 qifvvfssdpeilkeivreikrq--gvrvvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldv 80 (162)
T 2l82_A 3 QIFVVFSSDPEILKEIVREIKRQ--GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDV 80 (162)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCE
T ss_pred eEEEEecCCHHHHHHHHHHHHhC--CeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcE
Confidence 45566666667888887776654 47888999987531011122334667898888765543333 345554447788
Q ss_pred EEEec
Q 021895 208 LVLAR 212 (306)
Q Consensus 208 vVlA~ 212 (306)
+|..-
T Consensus 81 vvivt 85 (162)
T 2l82_A 81 VVIVT 85 (162)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88764
No 264
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.63 E-value=1.5e+02 Score=26.98 Aligned_cols=11 Identities=27% Similarity=0.624 Sum_probs=4.8
Q ss_pred HHHhCCCCEEE
Q 021895 176 FLERHGIPYHY 186 (306)
Q Consensus 176 ~A~~~gIp~~~ 186 (306)
+.+++|+.+.+
T Consensus 52 ~l~~~g~~~~~ 62 (332)
T 2bon_A 52 LLREEGMTIHV 62 (332)
T ss_dssp HHHTTTCCEEE
T ss_pred HHHHcCCcEEE
Confidence 33444444443
No 265
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=27.60 E-value=77 Score=26.33 Aligned_cols=66 Identities=9% Similarity=0.148 Sum_probs=39.1
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCCh-hHHHHHHhCCCCEEEeC-CCCCCh--HHHHHHHh
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNS-HVIRFLERHGIPYHYLC-AKENER--EEELLELV 202 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~-~~~~~A~~~gIp~~~~~-~k~~~~--e~e~~~~v 202 (306)
+++|++|+.+|++- |+. .| .|+ .+.++.++.|+.+.... -+++.. .+.+.+.+
T Consensus 12 ~~~rv~Ii~tGdEl-----------g~i----------~D--sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~ 68 (169)
T 1y5e_A 12 KEVRCKIVTISDTR-----------TEE----------TD--KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGY 68 (169)
T ss_dssp CCCEEEEEEECSSC-----------CTT----------TC--HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHH
T ss_pred cCCEEEEEEEcCcc-----------Cee----------cc--ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHH
Confidence 56799999999853 110 11 233 45566777887654432 122211 14555666
Q ss_pred c--CCcEEEEeccCC
Q 021895 203 Q--NTDFLVLARYMQ 215 (306)
Q Consensus 203 ~--~~D~vVlA~ym~ 215 (306)
+ ++|+|+..|=.-
T Consensus 69 ~~~~~DlVittGG~g 83 (169)
T 1y5e_A 69 HKEDVDVVLTNGGTG 83 (169)
T ss_dssp TCTTCSEEEEECCCS
T ss_pred hcCCCCEEEEcCCCC
Confidence 6 799999998665
No 266
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=27.58 E-value=47 Score=32.74 Aligned_cols=57 Identities=11% Similarity=0.014 Sum_probs=36.8
Q ss_pred CceEEEEEeCCcchHHHHH-----Hhhhc---CCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 128 KYKVAVLASKQEHCLVDFL-----YGWQE---GKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll-----~~~~~---g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
+.-+++.+|++|+..+-+. ..|-. |+....+++|-++. .+++.+.|+++||+++.++
T Consensus 140 ~~TlvIviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~VAvT~~~----~s~L~~~A~~~Gi~~f~~~ 204 (460)
T 2q8n_A 140 KTTLFNVISKSGSTAEVMATYSIARGILEAYGLDPREHMLITTDPE----KGFLRKLVKEEGFRSLEVP 204 (460)
T ss_dssp GGEEEEEECSSSCCHHHHHHHHHHHHHHHHTTCCGGGTEEEEECSS----SSHHHHHHHHHTCEEEECC
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCccCeEEEEeCCC----CChHHHHHHHhCCceEeec
Confidence 3348899999996554432 22211 32124566665553 4689999999999888776
No 267
>1cqm_A Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus} SCOP: d.58.14.1 PDB: 1cqn_A 1qjh_A 1ris_A 1fka_F 1gix_I* 1hnw_F* 1hnx_F* 1hnz_F* 1hr0_F 1i94_F* 1i95_F* 1i96_F* 1i97_F* 1ibk_F* 1ibl_F* 1ibm_F 1j5e_F 1jgo_I* 1jgp_I* 1jgq_I* ...
Probab=27.55 E-value=2.1e+02 Score=21.96 Aligned_cols=41 Identities=5% Similarity=0.045 Sum_probs=29.4
Q ss_pred ccchHHHHHHHHHhcCCeEeEeeeecc---------CCCCeEEEEEEEEeC
Q 021895 52 EVGIVAKLSECIASRGGNILAADVFVP---------EKKNVFYSRSEFIFD 93 (306)
Q Consensus 52 RpGIVAaVS~~LAe~G~NIlD~sQ~id---------~l~G~FfMrmeVdv~ 93 (306)
...+|..+.+.+.++|+.|.+++.-.. ...|.|+ .+.|+.+
T Consensus 19 ~~~~~~~~~~~i~~~gg~i~~~e~wG~R~LAY~I~k~~~G~Y~-l~~f~a~ 68 (101)
T 1cqm_A 19 LALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYFL-WYQVEMP 68 (101)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEEETTEEEEEEE-EEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEeecCcccccCcCCCCEEEEE-EEEEEeC
Confidence 457889999999999999999876431 1245554 6667664
No 268
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=27.48 E-value=34 Score=29.50 Aligned_cols=66 Identities=12% Similarity=0.245 Sum_probs=35.5
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|. |..+...|.. .| .+++.++ +++ .....+.++++|+.+. . ..+ +.+.++|
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~--~g---~~~v~~~-~~~---~~~~~~~~~~~g~~~~--~----~~~----~~~~~~D 70 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR--KG---FRIVQVY-SRT---EESARELAQKVEAEYT--T----DLA----EVNPYAK 70 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH--HT---CCEEEEE-CSS---HHHHHHHHHHTTCEEE--S----CGG----GSCSCCS
T ss_pred CCeEEEEcCCHHHHHHHHHHHH--CC---CeEEEEE-eCC---HHHHHHHHHHcCCcee--C----CHH----HHhcCCC
Confidence 46999999876 4444333332 23 4543343 442 2345566677776532 1 111 2244789
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++=
T Consensus 71 vvi~av 76 (266)
T 3d1l_A 71 LYIVSL 76 (266)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888873
No 269
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=27.16 E-value=91 Score=26.04 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=45.4
Q ss_pred CCceEEEEEeCCc---chHHHHHHhhh-cCCCC-eEEE-EEeeC-C-CCCCChhHHHHHHhCCCCEEEeCCCCCChHHHH
Q 021895 127 PKYKVAVLASKQE---HCLVDFLYGWQ-EGKLP-VEIT-CVISN-H-DRGPNSHVIRFLERHGIPYHYLCAKENEREEEL 198 (306)
Q Consensus 127 ~~~riavl~S~~g---~~L~~ll~~~~-~g~l~-~~I~-~Visn-~-~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~ 198 (306)
.++||.|+.+|+- .-.++++.... +-.++ .+|. +-++. + ..+++..+++.++++||+..-...+.-+.+
T Consensus 5 ~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~~ar~l~~~--- 81 (158)
T 3rof_A 5 GMVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEAT--- 81 (158)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCSTTCCCCHHHHHHHHHTTCCCTTCCCCBCCTT---
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcccCCCCCHHHHHHHHHcCCCcCCCcceECChh---
Confidence 3679999999985 34455555432 11122 4442 22222 1 223677889999999998752211111111
Q ss_pred HHHhcCCcEEEEeccCC
Q 021895 199 LELVQNTDFLVLARYMQ 215 (306)
Q Consensus 199 ~~~v~~~D~vVlA~ym~ 215 (306)
. +.|+|+...-.+
T Consensus 82 ---~-~~DlIi~Md~~~ 94 (158)
T 3rof_A 82 ---D-DFDYIVAMDQSN 94 (158)
T ss_dssp ---C-CCSEEEESSHHH
T ss_pred ---h-cCCEEEEcCHHH
Confidence 1 789988865443
No 270
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=27.10 E-value=69 Score=27.61 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=39.9
Q ss_pred CCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChh-HHHHHHhCCCCEEEeC-CCCCCh--HHHHH
Q 021895 124 DIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSH-VIRFLERHGIPYHYLC-AKENER--EEELL 199 (306)
Q Consensus 124 ~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~-~~~~A~~~gIp~~~~~-~k~~~~--e~e~~ 199 (306)
...+++||+|+.+|++ ++ .|+ .| .|++ +.++++++|+.+.... -+++.. .+.+.
T Consensus 26 ~~~~~~rvaIistGdE-----l~----~G~-----------~D--sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~ 83 (185)
T 3rfq_A 26 AELVVGRALVVVVDDR-----TA----HGD-----------ED--HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALN 83 (185)
T ss_dssp ---CCEEEEEEEECHH-----HH----TTC-----------CC--SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHH
T ss_pred cCCCCCEEEEEEECcc-----cC----CCC-----------cC--cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHH
Confidence 3457889999999973 22 131 11 3443 4567788897654332 122111 13455
Q ss_pred HHh-cCCcEEEEeccCC
Q 021895 200 ELV-QNTDFLVLARYMQ 215 (306)
Q Consensus 200 ~~v-~~~D~vVlA~ym~ 215 (306)
+.+ +++|+|+..|=.-
T Consensus 84 ~a~~~~~DlVIttGGts 100 (185)
T 3rfq_A 84 TAVIGGVDLVVSVGGTG 100 (185)
T ss_dssp HHHHTTCSEEEEESCCS
T ss_pred HHHhCCCCEEEECCCCC
Confidence 555 4899999988665
No 271
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.03 E-value=58 Score=27.05 Aligned_cols=68 Identities=18% Similarity=0.199 Sum_probs=35.4
Q ss_pred ceEEEEEeCCc---chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCC-CEEEeCCCCCChHHHHHHHhcC
Q 021895 129 YKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI-PYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 129 ~riavl~S~~g---~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gI-p~~~~~~k~~~~e~e~~~~v~~ 204 (306)
+||.|.+...+ +....|+. +| ++|+++.-+.+ . .+.....++ .+..++.. +++.+.+.+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~---~G---~~V~~~~R~~~-----~-~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 84 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKN---KG---HEPVAMVRNEE-----Q-GPELRERGASDIVVANLE-----EDFSHAFAS 84 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---TT---CEEEEEESSGG-----G-HHHHHHTTCSEEEECCTT-----SCCGGGGTT
T ss_pred CeEEEECCCChHHHHHHHHHHh---CC---CeEEEEECChH-----H-HHHHHhCCCceEEEcccH-----HHHHHHHcC
Confidence 46655554332 33334433 34 67776654432 1 233344577 76666532 234455568
Q ss_pred CcEEEEecc
Q 021895 205 TDFLVLARY 213 (306)
Q Consensus 205 ~D~vVlA~y 213 (306)
+|.||.+.-
T Consensus 85 ~D~vi~~ag 93 (236)
T 3e8x_A 85 IDAVVFAAG 93 (236)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 998886543
No 272
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=27.02 E-value=57 Score=29.14 Aligned_cols=69 Identities=10% Similarity=0.095 Sum_probs=37.9
Q ss_pred CceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|.- .. .++..+..- -.++++ |++++ .....++|+++|++..+.+ .++.+ -.++|
T Consensus 2 ~~~igiIG~G~ig~~--~~~~~l~~~-~~~~l~--v~d~~---~~~~~~~a~~~g~~~~~~~-----~~~~l---~~~~D 65 (323)
T 1xea_A 2 SLKIAMIGLGDIAQK--AYLPVLAQW-PDIELV--LCTRN---PKVLGTLATRYRVSATCTD-----YRDVL---QYGVD 65 (323)
T ss_dssp CEEEEEECCCHHHHH--THHHHHTTS-TTEEEE--EECSC---HHHHHHHHHHTTCCCCCSS-----TTGGG---GGCCS
T ss_pred CcEEEEECCCHHHHH--HHHHHHHhC-CCceEE--EEeCC---HHHHHHHHHHcCCCccccC-----HHHHh---hcCCC
Confidence 469999998752 21 122332221 036777 45542 2356678899998742211 11212 13789
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++-
T Consensus 66 ~V~i~t 71 (323)
T 1xea_A 66 AVMIHA 71 (323)
T ss_dssp EEEECS
T ss_pred EEEEEC
Confidence 998874
No 273
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=26.92 E-value=1.9e+02 Score=21.35 Aligned_cols=71 Identities=8% Similarity=0.041 Sum_probs=36.2
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH-hcCC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL-VQNT 205 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~-v~~~ 205 (306)
.+||+|++.|. |..+...|.. .| .+|+++-.+. ....+..+.+|+.+...+. ...+.+.+. +.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g---~~v~~~d~~~-----~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KG---HDIVLIDIDK-----DICKKASAEIDALVINGDC---TKIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TT---CEEEEEESCH-----HHHHHHHHHCSSEEEESCT---TSHHHHHHTTTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CC---CeEEEEECCH-----HHHHHHHHhcCcEEEEcCC---CCHHHHHHcCcccC
Confidence 36899987755 3333333322 23 5666543222 2334445556876544321 122333333 4589
Q ss_pred cEEEEe
Q 021895 206 DFLVLA 211 (306)
Q Consensus 206 D~vVlA 211 (306)
|+++++
T Consensus 71 d~vi~~ 76 (140)
T 1lss_A 71 DMYIAV 76 (140)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999987
No 274
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=26.85 E-value=58 Score=25.90 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=24.2
Q ss_pred EEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 157 EITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 157 ~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
++.|+|-.....++..+++.|+++|||+...+
T Consensus 74 ~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 74 NVRCLILTGNLEPVQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp TEEEEEEETTCCCCHHHHHHHHHHTCCEEECS
T ss_pred CCcEEEEcCCCCCCHHHHHHHHHCCCeEEEEC
Confidence 46666554444477889999999999998865
No 275
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=26.62 E-value=1.6e+02 Score=26.31 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=41.1
Q ss_pred CCCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 126 ~~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+..+|.|.+.+.+ .....++. ..| ++|.++..+.++ +++|++.|..... +.......+++.++..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~--~~G---a~Vi~~~~~~~~------~~~~~~lga~~~~-~~~~~~~~~~~~~~~~ 210 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQ--ILN---FRLIAVTRNNKH------TEELLRLGAAYVI-DTSTAPLYETVMELTN 210 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHH--HHT---CEEEEEESSSTT------HHHHHHHTCSEEE-ETTTSCHHHHHHHHTT
T ss_pred CCCCEEEEeCCccHHHHHHHHHHH--HcC---CEEEEEeCCHHH------HHHHHhCCCcEEE-eCCcccHHHHHHHHhC
Confidence 34557777665543 33333333 234 678777766543 6778888876443 3222223345555554
Q ss_pred --CCcEEEEe
Q 021895 204 --NTDFLVLA 211 (306)
Q Consensus 204 --~~D~vVlA 211 (306)
.+|+++-+
T Consensus 211 ~~g~Dvvid~ 220 (340)
T 3gms_A 211 GIGADAAIDS 220 (340)
T ss_dssp TSCEEEEEES
T ss_pred CCCCcEEEEC
Confidence 57888764
No 276
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=26.39 E-value=1.5e+02 Score=26.88 Aligned_cols=120 Identities=16% Similarity=0.043 Sum_probs=59.6
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHH-HhcCC
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLE-LVQNT 205 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~-~v~~~ 205 (306)
.+||+|++.|. |..+...|.+ .| .+.+|+ +.+++ ....+.|++.|+-...... +.+ .+.++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~--~G-~~~~V~--~~dr~----~~~~~~a~~~G~~~~~~~~--------~~~~~~~~a 95 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR--SG-FKGKIY--GYDIN----PESISKAVDLGIIDEGTTS--------IAKVEDFSP 95 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--TT-CCSEEE--EECSC----HHHHHHHHHTTSCSEEESC--------TTGGGGGCC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CC-CCCEEE--EEECC----HHHHHHHHHCCCcchhcCC--------HHHHhhccC
Confidence 47999999886 3444333332 23 222554 34542 2346677888864322221 112 35689
Q ss_pred cEEEEeccCCCCcCchhhhhhhhhhhhhccCCCcccc---ccccCCHhHHhhcCCCeeEeCCCCCCCC
Q 021895 206 DFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSY---FNMILSGKFLRSYGKDVINIHHGLLPSF 270 (306)
Q Consensus 206 D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~il~~~~l~~~~~~iINiHpsLLP~f 270 (306)
|+||+|=-. ....+.+- ++...+.++.=+.|. +..+ -..+.+..+.+++..||-.-|..
T Consensus 96 DvVilavp~---~~~~~vl~--~l~~~l~~~~iv~d~~Svk~~~-~~~~~~~l~~~~v~~hPm~G~e~ 157 (314)
T 3ggo_A 96 DFVMLSSPV---RTFREIAK--KLSYILSEDATVTDQGSVKGKL-VYDLENILGKRFVGGHPIAGTEK 157 (314)
T ss_dssp SEEEECSCG---GGHHHHHH--HHHHHSCTTCEEEECCSCCTHH-HHHHHHHHGGGEECEEECCCCCC
T ss_pred CEEEEeCCH---HHHHHHHH--HHhhccCCCcEEEECCCCcHHH-HHHHHHhcCCCEEecCcccCCcc
Confidence 999998432 22222221 233334444322222 2211 12333333448999999776543
No 277
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=26.38 E-value=3.2e+02 Score=23.71 Aligned_cols=33 Identities=0% Similarity=-0.120 Sum_probs=26.6
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeee
Q 021895 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVF 76 (306)
Q Consensus 44 ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~ 76 (306)
|.-|+|+-..+...++...+.+.++-++.....
T Consensus 82 v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~ 114 (366)
T 3td9_A 82 VLAIIGEVASAHSLAIAPIAEENKVPMVTPAST 114 (366)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHTTCCEEESSCC
T ss_pred eEEEEccCCchhHHHHHHHHHhCCCeEEecCCC
Confidence 556778888888888899999999988876653
No 278
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=26.32 E-value=75 Score=29.08 Aligned_cols=64 Identities=22% Similarity=0.276 Sum_probs=37.3
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
.+||+|++.|. |+.+...|.. .| .+|+ +.+++ .....+.|++.|+.+. + .+ +.++++|
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~--~G---~~V~--~~~~~---~~~~~~~a~~~G~~~~--~-----~~----e~~~~aD 74 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD--SG---VDVT--VGLRS---GSATVAKAEAHGLKVA--D-----VK----TAVAAAD 74 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TT---CCEE--EECCT---TCHHHHHHHHTTCEEE--C-----HH----HHHHTCS
T ss_pred CCEEEEECchHHHHHHHHHHHH--Cc---CEEE--EEECC---hHHHHHHHHHCCCEEc--c-----HH----HHHhcCC
Confidence 35899999886 4544433332 33 3553 44442 2234677888887321 1 12 3445899
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|++|=
T Consensus 75 vVilav 80 (338)
T 1np3_A 75 VVMILT 80 (338)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 999983
No 279
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=26.32 E-value=1.9e+02 Score=26.37 Aligned_cols=72 Identities=8% Similarity=0.070 Sum_probs=38.7
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc-
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ- 203 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~- 203 (306)
+..+|.|.+.+.+ .....+.. ..| ++|.+++ +.++ +++|++.|... +++.+.....+++.++..
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~--~~G---a~Vi~~~-~~~~------~~~~~~lGa~~-vi~~~~~~~~~~v~~~t~g 230 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLR--LSG---YIPIATC-SPHN------FDLAKSRGAEE-VFDYRAPNLAQTIRTYTKN 230 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHH--HTT---CEEEEEE-CGGG------HHHHHHTTCSE-EEETTSTTHHHHHHHHTTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHH--HCC---CEEEEEe-CHHH------HHHHHHcCCcE-EEECCCchHHHHHHHHccC
Confidence 4456777665333 33333333 234 5777665 4322 67899999754 333222222345555544
Q ss_pred CCcEEEEe
Q 021895 204 NTDFLVLA 211 (306)
Q Consensus 204 ~~D~vVlA 211 (306)
++|+++=+
T Consensus 231 ~~d~v~d~ 238 (371)
T 3gqv_A 231 NLRYALDC 238 (371)
T ss_dssp CCCEEEES
T ss_pred CccEEEEC
Confidence 58887764
No 280
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=26.30 E-value=3.6e+02 Score=25.57 Aligned_cols=117 Identities=14% Similarity=0.199 Sum_probs=65.7
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCC-CChhHHHHHHhC------CCCEEEeCCCCCChHHHHH
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERH------GIPYHYLCAKENEREEELL 199 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~~~~~~~A~~~------gIp~~~~~~k~~~~e~e~~ 199 (306)
...||++++-.. +....++.++. ++++++. ++.++.. ++..+.+.|++. |..+.+.. .+.
T Consensus 187 ~glkva~vGD~~-nva~Sl~~~l~--~lG~~v~--~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~--------d~~ 253 (353)
T 3sds_A 187 EGLKIAWVGDAN-NVLFDLAIAAT--KMGVNVA--VATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT--------VPE 253 (353)
T ss_dssp TTCEEEEESCCC-HHHHHHHHHHH--HTTCEEE--EECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES--------CHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHH--HcCCEEE--EECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC--------CHH
Confidence 467899887654 34445554432 2456654 3334332 355666666643 55665542 234
Q ss_pred HHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhh--cCCCeeEeCCCCCCCCC
Q 021895 200 ELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS--YGKDVINIHHGLLPSFK 271 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~--~~~~iINiHpsLLP~f~ 271 (306)
+.++++|+|+.-.|.. .+.|+-- .+. +..+..-.+..+.++. .+.++|=.||. |+++
T Consensus 254 eav~~aDVvytd~w~s---mg~E~~~-~~r---------~~~~~~y~vt~ell~~~~ak~~ai~MHcL--P~~~ 312 (353)
T 3sds_A 254 VAVKDADVIVTDTWIS---MGQETEK-IKR---------LEAFKDFKVTSELAKRGGAKENWKFMHCL--PRHP 312 (353)
T ss_dssp HHTTTCSEEEECCC-----------C-HHH---------HHHTTTCCBCHHHHHHHTCCTTCEEEECS--CCCT
T ss_pred HHhcCCCEEEeCCccC---CchhhHH-HHH---------HHHhhCceecHHHHhhcccCCCcEEECCC--CCCC
Confidence 5677999999988743 3333210 110 1122233689999988 67789999995 8874
No 281
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=26.20 E-value=4.1e+02 Score=24.95 Aligned_cols=90 Identities=10% Similarity=0.042 Sum_probs=56.8
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeec----cCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccc
Q 021895 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFV----PEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRS 118 (306)
Q Consensus 43 ~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~i----d~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~ 118 (306)
-|+-|+|+...+...+++.++...++=.+.-..+. ++..-.++.|+. + +-...-.++.++.+.+|
T Consensus 116 ~v~aviG~~~S~~s~ava~i~~~~~iP~Is~~a~~~~lsd~~~~p~~fr~~---p----sd~~~~~a~~~ll~~fg---- 184 (479)
T 3sm9_A 116 LIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTV---P----PDFYQAKAMAEILRFFN---- 184 (479)
T ss_dssp CEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTTTTEEESS---C----CTHHHHHHHHHHHHHTT----
T ss_pred ceEEEECCCCcHHHHHHHHHHhcCCccEECCCcCCccccCcccCCCeEEeC---C----cHHHHHHHHHHHHHHCC----
Confidence 48889999999999999999999987666533321 221112333431 1 23555667777777765
Q ss_pred eeeecCCCCCceEEEEEeCCc---chHHHHHHhhhcC
Q 021895 119 VVRVPDIDPKYKVAVLASKQE---HCLVDFLYGWQEG 152 (306)
Q Consensus 119 ~~rl~~~~~~~riavl~S~~g---~~L~~ll~~~~~g 152 (306)
| .+|+++.+... ..++++-+.+++.
T Consensus 185 -w--------~~V~ii~~dd~~G~~~~~~~~~~~~~~ 212 (479)
T 3sm9_A 185 -W--------TYVSTVASEGDYGETGIEAFEQEARLR 212 (479)
T ss_dssp -C--------CEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred -C--------eEEEEEEecchhhHHHHHHHHHHHHHC
Confidence 2 27999998763 2345555554443
No 282
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=26.08 E-value=2.1e+02 Score=27.87 Aligned_cols=82 Identities=16% Similarity=0.132 Sum_probs=46.2
Q ss_pred CCCceEEEEEeCCcchHHH-HHHhhhcCCCCeEEEEEeeCCCCCC----------ChhHHHHHHhCCCCEEEeCCCCCCh
Q 021895 126 DPKYKVAVLASKQEHCLVD-FLYGWQEGKLPVEITCVISNHDRGP----------NSHVIRFLERHGIPYHYLCAKENER 194 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~-ll~~~~~g~l~~~I~~Visn~~~~~----------~~~~~~~A~~~gIp~~~~~~k~~~~ 194 (306)
..++|+.|.+..+|.-+.. +-.+.+.| +.+.+|--+++... +..+.+.+++.|.....+...-...
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~ 124 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD 124 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence 3466888888878765542 22222455 56666654443211 1245677888898777665222222
Q ss_pred H--HHHHHHhc----CCcEEEE
Q 021895 195 E--EELLELVQ----NTDFLVL 210 (306)
Q Consensus 195 e--~e~~~~v~----~~D~vVl 210 (306)
| +++.+.+. +.|++|-
T Consensus 125 e~i~~vi~~i~~~~G~IDiLVh 146 (401)
T 4ggo_A 125 EIKAQVIEEAKKKGIKFDLIVY 146 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEE
Confidence 2 34444443 7899985
No 283
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=26.00 E-value=2.7e+02 Score=25.74 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=30.4
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEE
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYH 185 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~ 185 (306)
+.||+|.+.|. |..+..+|.. .+ .+++++|.... .......+++.|+|++
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~--~p--~~elvav~d~~----~~~~~~~a~~~g~~~~ 51 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIK--QP--DMKLVGVAKTS----PNYEAFIAHRRGIRIY 51 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT--CT--TEEEEEEECSS----CSHHHHHHHHTTCCEE
T ss_pred CeEEEEEecCHHHHHHHHHHHc--CC--CCEEEEEEcCC----hHHHHHHHHhcCccee
Confidence 36899999854 3333333332 12 38998876532 2344567788898865
No 284
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=25.85 E-value=1.8e+02 Score=27.88 Aligned_cols=74 Identities=12% Similarity=0.083 Sum_probs=40.9
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC-----CCCCC-------
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-----AKENE------- 193 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~-----~k~~~------- 193 (306)
+..||+|++.|. |.....++.+. | ++|++ .++. ...++.+++.|.-+..++ .....
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--G---a~V~v--~D~~----~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--G---AKTTG--YDVR----PEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--T---CEEEE--ECSS----GGGHHHHHHTTCEECCCC-------------CHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--C---CEEEE--EeCC----HHHHHHHHHcCCeEEeccccccccccchhhhhHHH
Confidence 457999998876 34444455443 4 56543 3331 124567777775433221 00001
Q ss_pred ---hHHHHHHHhcCCcEEEEe
Q 021895 194 ---REEELLELVQNTDFLVLA 211 (306)
Q Consensus 194 ---~e~e~~~~v~~~D~vVlA 211 (306)
..+.+.+.++++|+|+.+
T Consensus 252 ~~~~~~~l~e~l~~aDIVI~t 272 (381)
T 3p2y_A 252 RAQQQQALEDAITKFDIVITT 272 (381)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC
T ss_pred HhhhHHHHHHHHhcCCEEEEC
Confidence 123566777899999986
No 285
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=25.79 E-value=1.7e+02 Score=29.50 Aligned_cols=83 Identities=13% Similarity=0.179 Sum_probs=50.2
Q ss_pred CCCCceEEEEEeCC--cchHHHHHHhhh-cCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCC---------
Q 021895 125 IDPKYKVAVLASKQ--EHCLVDFLYGWQ-EGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKEN--------- 192 (306)
Q Consensus 125 ~~~~~riavl~S~~--g~~L~~ll~~~~-~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~--------- 192 (306)
...++||+||+|.. |++--+++.+.. .++ ..+|++...++. -.-..+-|++++-.+.++.....
T Consensus 74 ~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd-~f~V~aLaAg~N---v~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~ 149 (488)
T 3au8_A 74 IKKPINVAIFGSTGSIGTNALNIIRECNKIEN-VFNVKALYVNKS---VNELYEQAREFLPEYLCIHDKSVYEELKELVK 149 (488)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHHHHSC-CEEEEEEEESSC---HHHHHHHHHHHCCSEEEESCGGGTHHHHTGGG
T ss_pred hhcceEEEEEccCcHHHHHHHHHHHcccCCCC-eEEEEEEEcCCC---HHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhh
Confidence 34567899999986 355556665531 111 378988888651 23466778888877776653210
Q ss_pred -----C-----hHHHHHHHhc--CCcEEEEe
Q 021895 193 -----E-----REEELLELVQ--NTDFLVLA 211 (306)
Q Consensus 193 -----~-----~e~e~~~~v~--~~D~vVlA 211 (306)
. -++.+.++.. ++|+||-|
T Consensus 150 ~~~~~~~~v~~G~egl~e~a~~~~~D~Vv~A 180 (488)
T 3au8_A 150 NIKDYKPIILCGDEGMKEICSSNSIDKIVIG 180 (488)
T ss_dssp GSTTCCCEEEEHHHHHHHHHHCTTCCEEEEC
T ss_pred hhcCCCceEEeCHHHHHHHhcCCCCCEEEEc
Confidence 0 1345556654 58988876
No 286
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=25.74 E-value=2.5e+02 Score=23.81 Aligned_cols=110 Identities=8% Similarity=0.131 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHH
Q 021895 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (306)
Q Consensus 99 ~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~ 178 (306)
..++.+.+++.+++.|. ++.++.+.+......+++.+...+..+ ||..... .+...++.++
T Consensus 25 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~l~~~~vdG----iIi~~~~-~~~~~~~~l~ 85 (294)
T 3qk7_A 25 FLEMISWIGIELGKRGL--------------DLLLIPDEPGEKYQSLIHLVETRRVDA----LIVAHTQ-PEDFRLQYLQ 85 (294)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEEECTTCCCHHHHHHHHHTCCSE----EEECSCC-SSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCChhhHHHHHHHHHcCCCCE----EEEeCCC-CChHHHHHHH
Confidence 56777788877777763 333343432212223333333333222 2222211 2236778889
Q ss_pred hCCCCEEEeCCCC-C--------ChH---HHHHHHhc---CCcEEEEeccCCCCcCchhhhhhhh
Q 021895 179 RHGIPYHYLCAKE-N--------ERE---EELLELVQ---NTDFLVLARYMQPVPLQKEAYLGYK 228 (306)
Q Consensus 179 ~~gIp~~~~~~k~-~--------~~e---~e~~~~v~---~~D~vVlA~ym~~~~~~~~~~~~~~ 228 (306)
+.|||+..+.... . ... ....+.+. .-.+.++.+-.. .+...+|+-||+
T Consensus 86 ~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~-~~~~~~R~~Gf~ 149 (294)
T 3qk7_A 86 KQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDAR-ISYVDQRLQGYV 149 (294)
T ss_dssp HTTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESSC-CHHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCcc-cchHHHHHHHHH
Confidence 9999999887421 1 111 23333332 457777776543 445678888885
No 287
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=25.49 E-value=45 Score=27.91 Aligned_cols=68 Identities=13% Similarity=0.187 Sum_probs=38.1
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChh-HHHHHHhCCCCEEEeC-CCCCC-hHHHHHHHhc
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSH-VIRFLERHGIPYHYLC-AKENE-REEELLELVQ 203 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~-~~~~A~~~gIp~~~~~-~k~~~-~e~e~~~~v~ 203 (306)
+++||+|+.+|++ ++ .| +| - | .|++ +.+++++.|+.+.... -++++ -.+.+.+.++
T Consensus 6 ~~~rv~ii~tGdE-----l~----~G----~i----~--D--sn~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~ 64 (164)
T 3pzy_A 6 TTRSARVIIASTR-----AS----SG----EY----E--D--RCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAID 64 (164)
T ss_dssp -CCEEEEEEECHH-----HH----C--------------C--CHHHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCC-----CC----CC----ce----e--e--HHHHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHh
Confidence 4679999999974 22 23 22 1 2 3443 4567788886543322 11221 1245555565
Q ss_pred -CCcEEEEeccCC
Q 021895 204 -NTDFLVLARYMQ 215 (306)
Q Consensus 204 -~~D~vVlA~ym~ 215 (306)
++|+|+..|=.-
T Consensus 65 ~~~DlVittGG~s 77 (164)
T 3pzy_A 65 DDVDVILTSGGTG 77 (164)
T ss_dssp TTCSEEEEESCCS
T ss_pred CCCCEEEECCCCC
Confidence 799999988655
No 288
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=25.38 E-value=1.4e+02 Score=26.19 Aligned_cols=13 Identities=23% Similarity=0.135 Sum_probs=6.5
Q ss_pred CCCceEEEEEeCC
Q 021895 126 DPKYKVAVLASKQ 138 (306)
Q Consensus 126 ~~~~riavl~S~~ 138 (306)
.++.+|+++....
T Consensus 60 ~~~~~Igvi~~~~ 72 (339)
T 3h5o_A 60 AKSRTVLVLIPSL 72 (339)
T ss_dssp ---CEEEEEESCS
T ss_pred CCCCEEEEEeCCC
Confidence 3455677776553
No 289
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=25.17 E-value=1.1e+02 Score=29.36 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=37.9
Q ss_pred CceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC-CChhHHHHHHhCCCC-EEEeC
Q 021895 128 KYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PNSHVIRFLERHGIP-YHYLC 188 (306)
Q Consensus 128 ~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~~~~~~~A~~~gIp-~~~~~ 188 (306)
+.||++..||.- +.+..+|.. . +.+|.++..++... .-..+.+.|++.||| +++++
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e--~---G~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd 64 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKE--Q---GYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIED 64 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHH--T---TEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEE
T ss_pred CCeEEEEEcChHHHHHHHHHHHH--c---CCEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 468999999964 344444433 2 36888888776431 124688899999999 66653
No 290
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=25.05 E-value=2.2e+02 Score=25.12 Aligned_cols=79 Identities=6% Similarity=0.034 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCC---hh
Q 021895 98 PREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPN---SH 172 (306)
Q Consensus 98 ~~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~---~~ 172 (306)
+.+++.+.+...-+++ +. . ....||+|..||.- +.+..++... -| .++.+|..++...+. ..
T Consensus 5 ~~~~~~~~l~~~l~d~-v~-------~-~g~~~vvv~lSGGiDSsv~a~l~~~~-~g---~~v~av~~~~~~~~~~~~~~ 71 (249)
T 3p52_A 5 DWQKITEKMCDFIQEK-VK-------N-SQSQGVVLGLSGGIDSALVATLCKRA-LK---ENVFALLMPTQISNKANLED 71 (249)
T ss_dssp CHHHHHHHHHHHHHHH-HH-------T-SSCSEEEEECCSSHHHHHHHHHHHHH-HT---TSEEEEECCSCCSSCHHHHH
T ss_pred CHHHHHHHHHHHHHHH-HH-------H-hCCCCEEEEcCCCHHHHHHHHHHHHH-cC---CcEEEEEecCCCCCHHHHHH
Confidence 4566666665544333 11 1 12458999999974 3444444332 13 467788776632111 35
Q ss_pred HHHHHHhCCCCEEEeCC
Q 021895 173 VIRFLERHGIPYHYLCA 189 (306)
Q Consensus 173 ~~~~A~~~gIp~~~~~~ 189 (306)
+.+.|+..|||+++++.
T Consensus 72 a~~~a~~lgi~~~~v~i 88 (249)
T 3p52_A 72 ALRLCADLNLEYKIIEI 88 (249)
T ss_dssp HHHHHHHHTCEEEECCC
T ss_pred HHHHHHHhCCCEEEEEC
Confidence 78889999999998863
No 291
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=25.00 E-value=1e+02 Score=26.84 Aligned_cols=55 Identities=16% Similarity=-0.038 Sum_probs=39.5
Q ss_pred HHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhh
Q 021895 56 VAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKM 112 (306)
Q Consensus 56 VAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~e 112 (306)
...+.+.|.++|+-+..-..+.. .|.-++|+.+..+....+.+++++.++.+++.
T Consensus 304 ~~~l~~~l~~~GV~v~~g~~~~~--~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 304 GAILTKIQDETGVGISGYLQEKS--ADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp HHHHHHHHHHHCEECCSCCEEEE--TTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcEecCCccccC--CCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 46788889999988877655433 45556677776544456789999999988754
No 292
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=24.97 E-value=79 Score=28.98 Aligned_cols=79 Identities=11% Similarity=-0.032 Sum_probs=46.8
Q ss_pred CceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhC-------CCCEEEeC-CCCCChHHHHH
Q 021895 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH-------GIPYHYLC-AKENEREEELL 199 (306)
Q Consensus 128 ~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~-------gIp~~~~~-~k~~~~e~e~~ 199 (306)
..|++++.|| --...+.....+.| .+|.++-.+........+.+.|+.. +||+++++ .. ...+++
T Consensus 179 ~~kvlvllSG-vDS~vaa~ll~~~G---~~v~~v~~~~~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~~~---~~~~~A 251 (307)
T 1vbk_A 179 EGRMIGILHD-ELSALAIFLMMKRG---VEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAESFD---RVLKLI 251 (307)
T ss_dssp TCEEEEECSS-HHHHHHHHHHHHBT---CEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESSHH---HHHHHH
T ss_pred CCcEEEEEeC-CcHHHHHHHHHhCC---CeEEEEEEEECHHHHHHHHHHHHHHhhhccCCCCcEEEeCCCH---HHHHHH
Confidence 3699999999 63333332334455 7888888873210012356667665 89999986 21 111222
Q ss_pred HHhcCCcEEEEeccC
Q 021895 200 ELVQNTDFLVLARYM 214 (306)
Q Consensus 200 ~~v~~~D~vVlA~ym 214 (306)
+. .++|.|+..=|.
T Consensus 252 ~~-~ga~~I~tG~~~ 265 (307)
T 1vbk_A 252 RD-FGVKGVIKGLRP 265 (307)
T ss_dssp HH-HTCCEEECCCCG
T ss_pred HH-cCCCEEEECccc
Confidence 22 289999987654
No 293
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=24.89 E-value=82 Score=28.45 Aligned_cols=34 Identities=18% Similarity=0.094 Sum_probs=23.8
Q ss_pred HhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 147 YGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 147 ~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
++.+++.+ +|++|-|+. .-.+.|+++|||+..++
T Consensus 42 ~~~~~~~l--~i~~V~tS~------~t~~~a~~~Gi~l~~l~ 75 (228)
T 4gmk_A 42 KRVNEEGL--DIVGVTTSI------RTAEQAKSLGIVIKDID 75 (228)
T ss_dssp HHHHHHCC--CCEEEESSH------HHHHHHHHTTCCBCCGG
T ss_pred HHHhhcCC--cEEEEeCcH------HHHHHHHHcCCceeChH
Confidence 33444544 688887765 34788999999987654
No 294
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=24.80 E-value=33 Score=29.48 Aligned_cols=67 Identities=13% Similarity=0.279 Sum_probs=36.0
Q ss_pred ceEEEEEeCC-cchHHHHHHhhhcCCCC-eEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 129 YKVAVLASKQ-EHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 129 ~riavl~S~~-g~~L~~ll~~~~~g~l~-~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
+||+|++.|. |..+..-|.. .|..+ .+|. +.+++ .....++++++|+.+ .. . .+ +.++++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~--~g~~~~~~V~--~~~r~---~~~~~~~~~~~g~~~--~~----~-~~---e~~~~aD 65 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN--KNIVSSNQII--CSDLN---TANLKNASEKYGLTT--TT----D-NN---EVAKNAD 65 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTSSCGGGEE--EECSC---HHHHHHHHHHHCCEE--CS----C-HH---HHHHHCS
T ss_pred CeEEEECccHHHHHHHHHHHh--CCCCCCCeEE--EEeCC---HHHHHHHHHHhCCEE--eC----C-hH---HHHHhCC
Confidence 6899999886 3433332322 34222 2554 34552 234555666677643 11 1 12 2344799
Q ss_pred EEEEec
Q 021895 207 FLVLAR 212 (306)
Q Consensus 207 ~vVlA~ 212 (306)
+|+++=
T Consensus 66 vVilav 71 (247)
T 3gt0_A 66 ILILSI 71 (247)
T ss_dssp EEEECS
T ss_pred EEEEEe
Confidence 999986
No 295
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=24.69 E-value=70 Score=28.97 Aligned_cols=67 Identities=7% Similarity=0.181 Sum_probs=37.4
Q ss_pred CceEEEEEeCCc-c-hHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC-EEEeCCCCCChHHHHHHHhc-
Q 021895 128 KYKVAVLASKQE-H-CLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP-YHYLCAKENEREEELLELVQ- 203 (306)
Q Consensus 128 ~~riavl~S~~g-~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp-~~~~~~k~~~~e~e~~~~v~- 203 (306)
++||+|++.|.- . .....+.. .+ .++|++|.+.. + ..++|+++++| +.... .. + +++.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~-~-----~~~~a~~~~~~~~~~~~----~~-~---~ll~~ 63 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMI--RE--TLEVKTIFDLH-V-----NEKAAAPFKEKGVNFTA----DL-N---ELLTD 63 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTT--CT--TEEEEEEECTT-C-----CHHHHHHHHTTTCEEES----CT-H---HHHSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhh--CC--CeEEEEEECCC-H-----HHHHHHhhCCCCCeEEC----CH-H---HHhcC
Confidence 579999999873 2 22222322 11 38999888754 2 36777775443 11111 11 2 2333
Q ss_pred -CCcEEEEec
Q 021895 204 -NTDFLVLAR 212 (306)
Q Consensus 204 -~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 64 ~~~D~V~i~t 73 (349)
T 3i23_A 64 PEIELITICT 73 (349)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEEeC
Confidence 588888874
No 296
>3i1m_F 30S ribosomal protein S6; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1p6g_F 1p87_F* 1vs7_F* 2avy_F 2aw7_F 1vs5_F 2i2u_F 2i2p_F* 2qan_F* 2qb9_F* 2qbb_F* 2qbd_F 2qbf_F 2qbh_F* 2qbj_F* 2qou_F* 2qow_F* 2qoy_F* 2qp0_F* 2vho_F ...
Probab=24.53 E-value=88 Score=25.88 Aligned_cols=55 Identities=11% Similarity=0.144 Sum_probs=36.6
Q ss_pred CCccchHHHHHHHHHhcCCeEeEeeeecc---------CCCCeEEEEEEEEeCCCCCCHHHHHHHHH
Q 021895 50 PDEVGIVAKLSECIASRGGNILAADVFVP---------EKKNVFYSRSEFIFDPIKWPREQMDEDFF 107 (306)
Q Consensus 50 pDRpGIVAaVS~~LAe~G~NIlD~sQ~id---------~l~G~FfMrmeVdv~~~~~~~eeLreaL~ 107 (306)
.....+|..+.+.|.++|+.|.+++.... ...|+|+ .+.|+.++ ...++|...|.
T Consensus 16 e~v~~~ve~~~~~I~~~GG~I~~ve~wG~R~LAY~I~K~~~G~Y~-l~~f~a~~--~~i~ELer~lr 79 (135)
T 3i1m_F 16 EQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV-LMNVEAPQ--EVIDELETTFR 79 (135)
T ss_dssp TSHHHHHHHHHHHHHHTTCEECCCEEEEEECCSSCTTSSSCEEEE-ECCEECCT--THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeeccccCceEcCCCCeEEEE-EEEEEeCH--HHHHHHHHHhc
Confidence 34567888999999999999998876541 2256665 66777654 23455555443
No 297
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=24.49 E-value=2.3e+02 Score=24.12 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=21.7
Q ss_pred HhCCCCEEEeCCCCCChHHHHHHHhcCCcEEEEecc
Q 021895 178 ERHGIPYHYLCAKENEREEELLELVQNTDFLVLARY 213 (306)
Q Consensus 178 ~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~vVlA~y 213 (306)
+..|+.+...+.. ..+.+.+.++++|.||.+.-
T Consensus 53 ~~~~v~~v~~D~~---d~~~l~~~~~~~d~vi~~a~ 85 (307)
T 2gas_A 53 QSLGVILLEGDIN---DHETLVKAIKQVDIVICAAG 85 (307)
T ss_dssp HHTTCEEEECCTT---CHHHHHHHHTTCSEEEECSS
T ss_pred HhCCCEEEEeCCC---CHHHHHHHHhCCCEEEECCc
Confidence 3467777665521 24567777889999887543
No 298
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=24.24 E-value=3.5e+02 Score=23.42 Aligned_cols=108 Identities=13% Similarity=0.162 Sum_probs=55.9
Q ss_pred HHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCC--hhHHHHHHhC
Q 021895 103 DEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERH 180 (306)
Q Consensus 103 reaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~--~~~~~~A~~~ 180 (306)
..++..+++.+++...+......+...-...+-......+.+++...+- -.| +||.+.+..-. ....+.+++.
T Consensus 82 ~~~v~~i~~~~~ip~is~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~w----~~v-aii~~~d~~~~~~~~~~~~~~~~ 156 (389)
T 4gpa_A 82 VHTLTSFCSALHISLITPSFPTEGESQFVLQLRPSLRGALLSLLDHYEW----NCF-VFLYDTDRGYSILQAIMEKAGQN 156 (389)
T ss_dssp HHHHHHHHHHTTCEEEECSCCCSSCCSSEEECSCCCHHHHHHHHHHTTC----CEE-EEEECSTTCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCceeccccccccccCCccccCCHHHHHHHHHHHcCC----cEE-EEEEecchhhHHHHHHHHHHHhc
Confidence 4456677777775443222222333322333334445677777765321 234 45555443211 2345667888
Q ss_pred CCCEEEeCCCCCChH--HHHHHHhc--CCcEEEEeccCC
Q 021895 181 GIPYHYLCAKENERE--EELLELVQ--NTDFLVLARYMQ 215 (306)
Q Consensus 181 gIp~~~~~~k~~~~e--~e~~~~v~--~~D~vVlA~ym~ 215 (306)
|+.+..........+ ..+++.++ ++|+||+.+|..
T Consensus 157 g~~v~~~~~~~~~~~d~~~~l~~i~~~~~~vIv~~~~~~ 195 (389)
T 4gpa_A 157 GWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIE 195 (389)
T ss_dssp TCEEEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCHH
T ss_pred CceEEEEeecCCcchhHHHHHHHhhccCCcEEEEEechh
Confidence 987655432111111 33444444 899999988754
No 299
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=24.05 E-value=1.3e+02 Score=28.26 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=38.8
Q ss_pred CCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHH---hCCCC-EEEeCCCCCChHHHHHHH
Q 021895 127 PKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE---RHGIP-YHYLCAKENEREEELLEL 201 (306)
Q Consensus 127 ~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~---~~gIp-~~~~~~k~~~~e~e~~~~ 201 (306)
++.||+|++.|.- +. .+..+..- -.++|++|.... ...+.++|+ ++|+| ...... . ++.+.++
T Consensus 19 ~~~rvgiIG~G~~g~~---h~~~l~~~-~~~~lvav~d~~----~~~~~~~a~~~~~~g~~~~~~~~~-~---~~~~~~l 86 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQT---HVENMARR-DDVEIVAFADPD----PYMVGRAQEILKKNGKKPAKVFGN-G---NDDYKNM 86 (444)
T ss_dssp CCEEEEEECCSHHHHH---HHHHHHTC-TTEEEEEEECSC----HHHHHHHHHHHHHTTCCCCEEECS-S---TTTHHHH
T ss_pred CCceEEEEecCHHHHH---HHHHHHhC-CCcEEEEEEeCC----HHHHHHHHHHHHhcCCCCCceecc-C---CCCHHHH
Confidence 4679999998742 22 22222221 137898887543 123344444 57875 222211 0 1123345
Q ss_pred hc--CCcEEEEec
Q 021895 202 VQ--NTDFLVLAR 212 (306)
Q Consensus 202 v~--~~D~vVlA~ 212 (306)
+. ++|+|+++-
T Consensus 87 l~~~~vD~V~i~t 99 (444)
T 2ixa_A 87 LKDKNIDAVFVSS 99 (444)
T ss_dssp TTCTTCCEEEECC
T ss_pred hcCCCCCEEEEcC
Confidence 54 689999874
No 300
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=23.82 E-value=1.5e+02 Score=27.13 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=35.2
Q ss_pred CCCceEEEEEeCCc-ch-HHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 126 DPKYKVAVLASKQE-HC-LVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 126 ~~~~riavl~S~~g-~~-L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.++.||+|++.|.- .. ....+.. .+ .+++++|....+ .+.+++++.+..+- . +.+++.
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~--~~--~~~l~av~d~~~-------~~~~~~~~~~~~~~-----~----~~~ll~ 64 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRS--VP--GLNLAFVASRDE-------EKVKRDLPDVTVIA-----S----PEAAVQ 64 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHT--ST--TEEEEEEECSCH-------HHHHHHCTTSEEES-----C----HHHHHT
T ss_pred CCcceEEEECCCHHHHHHHHHHHhh--CC--CeEEEEEEcCCH-------HHHHhhCCCCcEEC-----C----HHHHhc
Confidence 35789999999863 22 2233332 12 378888876431 22334554333331 1 223344
Q ss_pred --CCcEEEEec
Q 021895 204 --NTDFLVLAR 212 (306)
Q Consensus 204 --~~D~vVlA~ 212 (306)
++|+|+++-
T Consensus 65 ~~~~D~V~i~t 75 (364)
T 3e82_A 65 HPDVDLVVIAS 75 (364)
T ss_dssp CTTCSEEEECS
T ss_pred CCCCCEEEEeC
Confidence 688888873
No 301
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=23.80 E-value=2.5e+02 Score=24.81 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=39.4
Q ss_pred CCCceEEEEE-eCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 126 DPKYKVAVLA-SKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 126 ~~~~riavl~-S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+..+|.|.+ ++. |.....++.. .| ++|.++..+.+ -+++|++.|..... +.......+++.+...
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~--~G---a~Vi~~~~~~~------~~~~~~~~ga~~~~-~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKM--KG---AHTIAVASTDE------KLKIAKEYGAEYLI-NASKEDILRQVLKFTN 214 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH--TT---CEEEEEESSHH------HHHHHHHTTCSEEE-ETTTSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH--CC---CEEEEEeCCHH------HHHHHHHcCCcEEE-eCCCchHHHHHHHHhC
Confidence 3445676665 222 2333333332 34 67777766542 36788999965433 3222223345555553
Q ss_pred --CCcEEEEe
Q 021895 204 --NTDFLVLA 211 (306)
Q Consensus 204 --~~D~vVlA 211 (306)
..|+++-+
T Consensus 215 ~~g~D~vid~ 224 (334)
T 3qwb_A 215 GKGVDASFDS 224 (334)
T ss_dssp TSCEEEEEEC
T ss_pred CCCceEEEEC
Confidence 58888765
No 302
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=23.77 E-value=2.3e+02 Score=21.09 Aligned_cols=40 Identities=20% Similarity=0.467 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCE---EEeCCCCCChHHHHHHHhc--CCcEEEEecc
Q 021895 173 VIRFLERHGIPY---HYLCAKENEREEELLELVQ--NTDFLVLARY 213 (306)
Q Consensus 173 ~~~~A~~~gIp~---~~~~~k~~~~e~e~~~~v~--~~D~vVlA~y 213 (306)
..++++++|++. ...-..+ ...+++.+..+ ++|+||+...
T Consensus 71 l~~~~~~~~~~~~~v~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~ 115 (143)
T 3fdx_A 71 LKEIAKKFSIPEDRMHFHVAEG-SPKDKILALAKSLPADLVIIASH 115 (143)
T ss_dssp HHHHHTTSCCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEEESS
T ss_pred HHHHHHHcCCCCCceEEEEEec-ChHHHHHHHHHHhCCCEEEEeCC
Confidence 455667787762 2211112 34567888776 8999999876
No 303
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=23.73 E-value=81 Score=28.37 Aligned_cols=64 Identities=14% Similarity=0.095 Sum_probs=35.0
Q ss_pred CCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 127 PKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 127 ~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
..+||+|++.|. |..+...|.. .| .+|++ .|++ .. ..+.+.+.|+.+ .. .+.+.++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G---~~V~~--~dr~---~~-~~~~l~~~g~~~--~~--------~~~e~~~~a 88 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AG---YALQV--WNRT---PA-RAASLAALGATI--HE--------QARAAARDA 88 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TT---CEEEE--ECSC---HH-HHHHHHTTTCEE--ES--------SHHHHHTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CC---CeEEE--EcCC---HH-HHHHHHHCCCEe--eC--------CHHHHHhcC
Confidence 457999999987 4444443332 34 56543 4552 12 234444456532 11 122445689
Q ss_pred cEEEEe
Q 021895 206 DFLVLA 211 (306)
Q Consensus 206 D~vVlA 211 (306)
|+|+++
T Consensus 89 DvVi~~ 94 (320)
T 4dll_A 89 DIVVSM 94 (320)
T ss_dssp SEEEEC
T ss_pred CEEEEE
Confidence 999987
No 304
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=23.61 E-value=1.3e+02 Score=28.10 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=39.3
Q ss_pred CCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhC----CCCEEEeCCCCCChHHHHHH
Q 021895 127 PKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH----GIPYHYLCAKENEREEELLE 200 (306)
Q Consensus 127 ~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~----gIp~~~~~~k~~~~e~e~~~ 200 (306)
..+||+|+++|.- ..+.+++.. .+ ..+| .|.|++ .....++++++ |+++..+. . +.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~--~~--~~~V--~V~~r~---~~~a~~la~~~~~~~g~~~~~~~----~----~~e 190 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKH--LG--IEEI--VAYDTD---PLATAKLIANLKEYSGLTIRRAS----S----VAE 190 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHH--SC--CCEE--EEECSS---HHHHHHHHHHHTTCTTCEEEECS----S----HHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHh--CC--CcEE--EEEcCC---HHHHHHHHHHHHhccCceEEEeC----C----HHH
Confidence 3468999999863 233444432 12 1233 445663 24556677664 66554432 1 223
Q ss_pred HhcCCcEEEEecc
Q 021895 201 LVQNTDFLVLARY 213 (306)
Q Consensus 201 ~v~~~D~vVlA~y 213 (306)
.+.++|+||++--
T Consensus 191 av~~aDiVi~aTp 203 (350)
T 1x7d_A 191 AVKGVDIITTVTA 203 (350)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHhcCCEEEEecc
Confidence 4568999999843
No 305
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=23.59 E-value=1.2e+02 Score=27.37 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=21.2
Q ss_pred CCceEEEEEeCCc-c--hHHHHHHhhhcCCCCeEEEEEeeCC
Q 021895 127 PKYKVAVLASKQE-H--CLVDFLYGWQEGKLPVEITCVISNH 165 (306)
Q Consensus 127 ~~~riavl~S~~g-~--~L~~ll~~~~~g~l~~~I~~Visn~ 165 (306)
++.||+|++.|.- . .+.++. . .+ .++|++|.+..
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~-~--~~--~~~lvav~d~~ 60 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIA-K--NA--NFKLVATASRH 60 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHH-H--CT--TEEEEEEECSS
T ss_pred CCceEEEEecCHHHHHHHHHHHH-h--CC--CeEEEEEEeCC
Confidence 4689999999863 1 233332 2 12 38999988654
No 306
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=23.58 E-value=4.8e+02 Score=24.83 Aligned_cols=188 Identities=10% Similarity=0.077 Sum_probs=95.9
Q ss_pred EEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceeeec
Q 021895 44 IHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVP 123 (306)
Q Consensus 44 ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~rl~ 123 (306)
-|.+.|-.-.|-. -+..+|.+.|++++.++.. .+|.|- .........+.+++...+....+|+ ..
T Consensus 174 kivvD~~nG~~~~-~~~~ll~~lG~~v~~~~~~---pDg~f~-----n~~~~~~~~~~l~~~v~~~~adlgi------a~ 238 (443)
T 3i3w_A 174 KVVVDCAHGAASH-NFEALLDKFGINYVSIASN---PDGLNI-----NVGCGATCVSNIKKAVKEQKADLGI------SL 238 (443)
T ss_dssp EEEEECTTSTTTT-HHHHHHHHTTCEEEESSCC---CCSSCT-----TTTCSTTCHHHHHHHHHHHTCSEEE------EE
T ss_pred eEEEECCCChHHH-HHHHHHHHcCCEEEEECCc---cCCCCC-----CCCCCCCCHHHHHHHHHhcCCcEEE------EE
Confidence 4555666555532 2355788999999877653 245541 0011123466666666655555554 23
Q ss_pred CCCCCceEEEEEeCCc-----chHHHHHHhh--hcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHH
Q 021895 124 DIDPKYKVAVLASKQE-----HCLVDFLYGW--QEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREE 196 (306)
Q Consensus 124 ~~~~~~riavl~S~~g-----~~L~~ll~~~--~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~ 196 (306)
|.|-. |+++. ..+| .-+-.|+..+ +.+.+. . ||.+-. .+..+.+.|+++|+++.....-. +
T Consensus 239 DgDaD-R~~~v-d~~G~~l~gd~i~~lla~~l~~~~~~~-~---vv~tv~--ss~~l~~~~~~~G~~~~~t~~G~-k--- 306 (443)
T 3i3w_A 239 DGDAD-RIIIV-DENGQEIDGDGILNILAQYSDICGGTN-G---IVGTQM--TNMSYENHYRANKIPFIRSKVGD-R--- 306 (443)
T ss_dssp CTTSC-BEEEE-CTTSCEECHHHHHHHHHHTTTTTTCCS-C---EEEETT--SCHHHHHHHHHTTCCEEEESSST-T---
T ss_pred CCCCc-eEEEE-CCCCcEeChhHHHHHHHHHHHHhCCCC-e---EEEeec--CchHHHHHHHHCCCeEEEEeChH-H---
Confidence 55444 56654 4444 2333444332 233332 2 222221 23457788999999998876321 1
Q ss_pred HHHHHhcCCcEEEEeccC------CCCcCchhhhhhh-hhhhhhccCC-CccccccccCCHhHHhhcCCCeeEeCCC
Q 021895 197 ELLELVQNTDFLVLARYM------QPVPLQKEAYLGY-KLLESLSSKG-SLTSYFNMILSGKFLRSYGKDVINIHHG 265 (306)
Q Consensus 197 e~~~~v~~~D~vVlA~ym------~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~il~~~~l~~~~~~iINiHps 265 (306)
-+.+.+.+.++ +++|=+ ...-.-+|+.+.. ++.+-|+..| ++.+....+ ..||..-+|++-.
T Consensus 307 ~i~~~m~~~~~-~~ggE~SG~~~~~~~~~~~Dgi~a~l~~le~l~~~g~~Lsel~~~~------~~~p~~~~~v~~~ 376 (443)
T 3i3w_A 307 YVLEDLVKYGY-KIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADKPVSEFKLQG------ELMQQTLINVPLT 376 (443)
T ss_dssp HHHHHHHHHTC-CEEECTTSBEEETTTCSSCCHHHHHHHHHHHTTTCSSCGGGTSCSS------CCCEEEEEEEECS
T ss_pred HHHHHHhhcCc-EEEEEeeCcEEEcCcCcCCCHHHHHHHHHHHHHHcCCCHHHHHHhh------hhhcceEEEEEcC
Confidence 12222221221 122100 0001125555544 6788887766 666655543 2466677888864
No 307
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=23.57 E-value=1.3e+02 Score=23.06 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=27.2
Q ss_pred HHHHHhCCCC-EEEeCCCCCChHHHHHHH-hc--CCcEEEEeccCC
Q 021895 174 IRFLERHGIP-YHYLCAKENEREEELLEL-VQ--NTDFLVLARYMQ 215 (306)
Q Consensus 174 ~~~A~~~gIp-~~~~~~k~~~~e~e~~~~-v~--~~D~vVlA~ym~ 215 (306)
.+.+++.|++ +...-.......+++++. .+ ++|+||+....+
T Consensus 85 ~~~~~~~g~~~~~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~ 130 (156)
T 3fg9_A 85 VQLAEQRGVNQVEPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTE 130 (156)
T ss_dssp HHHHHHHTCSSEEEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCC
T ss_pred HHHHHHcCCCceEEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 3446677884 544332212345678887 54 899999988776
No 308
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=23.56 E-value=1.6e+02 Score=25.84 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=40.6
Q ss_pred ceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCE-EEeCCCC---CChH------H
Q 021895 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HYLCAKE---NERE------E 196 (306)
Q Consensus 129 ~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~-~~~~~k~---~~~e------~ 196 (306)
+||.+++.... ..+..|+.++++-. +.++..+++... .....+..+..|+++ ..++... .... .
T Consensus 1 mkIl~v~~~~~~~~~~~~l~~~L~~~g-~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 1vgv_A 1 MKVLTVFGTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQH---REMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILE 76 (384)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHST-TCEEEEEECCSS---GGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHH
T ss_pred CeEEEEecccHHHHHHHHHHHHHHhCC-CCceEEEEcCCC---HHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHHHH
Confidence 57877543322 23456666665421 235554555431 122334455678766 4444211 1101 2
Q ss_pred HHHHHhc--CCcEEEEecc
Q 021895 197 ELLELVQ--NTDFLVLARY 213 (306)
Q Consensus 197 e~~~~v~--~~D~vVlA~y 213 (306)
.+.++++ ++|+|++-+.
T Consensus 77 ~l~~~l~~~~pDvv~~~~~ 95 (384)
T 1vgv_A 77 GLKPILAEFKPDVVLVHGD 95 (384)
T ss_dssp HHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHhCCCEEEEeCC
Confidence 4555554 8999999764
No 309
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=23.54 E-value=1.7e+02 Score=25.84 Aligned_cols=87 Identities=10% Similarity=0.032 Sum_probs=26.9
Q ss_pred HHHHHHHHHhhhhcccc-eeeecCCCCCceEEEEEeCCc-chHHHHHHhhhc--CCCCeEEEEEeeCCCCCCChhHHHHH
Q 021895 102 MDEDFFKLSKMFNAMRS-VVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQE--GKLPVEITCVISNHDRGPNSHVIRFL 177 (306)
Q Consensus 102 LreaL~~la~elgl~~~-~~rl~~~~~~~riavl~S~~g-~~L~~ll~~~~~--g~l~~~I~~Visn~~~~~~~~~~~~A 177 (306)
-++...+.++++|-.-+ ..+-....+..+|+++..... .....++.++++ .+...++....++.+.......++..
T Consensus 43 tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l 122 (355)
T 3e3m_A 43 TRERILKVVKDMNYVPDQVAGSLTTKRSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETM 122 (355)
T ss_dssp ----------------------------CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHH
Confidence 35555555566652111 011112344567888887644 233344443321 11234554333332210112334445
Q ss_pred HhCCCCEEEeC
Q 021895 178 ERHGIPYHYLC 188 (306)
Q Consensus 178 ~~~gIp~~~~~ 188 (306)
...++--..+.
T Consensus 123 ~~~~vdGiI~~ 133 (355)
T 3e3m_A 123 LRRRPEAMVLS 133 (355)
T ss_dssp HHTCCSEEEEE
T ss_pred HhCCCCEEEEe
Confidence 56666655544
No 310
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=23.43 E-value=2.2e+02 Score=24.01 Aligned_cols=112 Identities=10% Similarity=-0.020 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHH
Q 021895 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLE 178 (306)
Q Consensus 99 ~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~ 178 (306)
..++.+.+++.+++.|. ++.++.+.+...-...++.+.+.+..+-| +.... .....+.++.++
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~i~~l~~~~vdgii--i~~~~-~~~~~~~~~~~~ 79 (306)
T 8abp_A 17 FQTEWKFADKAGKDLGF--------------EVIKIAVPDGEKTLNAIDSLAASGAKGFV--ICTPD-PKLGSAIVAKAR 79 (306)
T ss_dssp HHHHHHHHHHHHHHHTE--------------EEEEEECCSHHHHHHHHHHHHHTTCCEEE--EECSC-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------------EEEEeCCCCHHHHHHHHHHHHHcCCCEEE--EeCCC-chhhHHHHHHHH
Confidence 57778888888877763 33344443222222333333333322211 22221 101234577889
Q ss_pred hCCCCEEEeCCC--CCC------------hH--------HHHHHHhc-CC----cEEEEe-ccCCCCcCchhhhhhhh
Q 021895 179 RHGIPYHYLCAK--ENE------------RE--------EELLELVQ-NT----DFLVLA-RYMQPVPLQKEAYLGYK 228 (306)
Q Consensus 179 ~~gIp~~~~~~k--~~~------------~e--------~e~~~~v~-~~----D~vVlA-~ym~~~~~~~~~~~~~~ 228 (306)
+.|||+..+... ... .. +.+.+.+. +. .+.++. +.. ..+...+|+-||+
T Consensus 80 ~~~iPvV~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~~g~~~~~~~~i~~~~~~~~-~~~~~~~R~~Gf~ 156 (306)
T 8abp_A 80 GYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKEMQKRGWDVKESAVMAITAN-ELDTARRRTTGSM 156 (306)
T ss_dssp HTTCEEEEESSCCBCTTSCBCTTSCEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEECT-TSHHHHHHHHHHH
T ss_pred HCCCcEEEeCCCCCCccccccccccEEecChhHHHHHHHHHHHHHHHhcCCCccceEEEEecCC-CChHHHHHHHHHH
Confidence 999999888731 110 11 12333332 32 666664 443 3667789999985
No 311
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=23.37 E-value=52 Score=24.51 Aligned_cols=51 Identities=22% Similarity=0.291 Sum_probs=29.7
Q ss_pred HHHHhhhcCCCCeEEEEEeeCCCCCCC--hhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 144 DFLYGWQEGKLPVEITCVISNHDRGPN--SHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 144 ~ll~~~~~g~l~~~I~~Visn~~~~~~--~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
..+.+++.|+ +..+.+-.|-+ |+ .++..+|+.++||+++++. -+++-+.+.
T Consensus 18 ~v~kai~~gk--aklViiA~D~~--~~~~~~i~~lc~~~~Ip~~~v~s-----k~eLG~a~G 70 (82)
T 3v7e_A 18 QTVKALKRGS--VKEVVVAKDAD--PILTSSVVSLAEDQGISVSMVES-----MKKLGKACG 70 (82)
T ss_dssp HHHHHHTTTC--EEEEEEETTSC--HHHHHHHHHHHHHHTCCEEEESC-----HHHHHHHHT
T ss_pred HHHHHHHcCC--eeEEEEeCCCC--HHHHHHHHHHHHHcCCCEEEECC-----HHHHHHHhC
Confidence 3445555663 44443333332 32 3567789999999999863 235555553
No 312
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=23.32 E-value=39 Score=33.29 Aligned_cols=74 Identities=11% Similarity=-0.020 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHHh-----hh---cCC--CCeEEEEEeeCC
Q 021895 96 KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYG-----WQ---EGK--LPVEITCVISNH 165 (306)
Q Consensus 96 ~~~~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~~-----~~---~g~--l~~~I~~Visn~ 165 (306)
++|.+.+.+.++. ++ ++.-..+.+||+|++.+-+... |- .|. ....+++| |++
T Consensus 117 nvDp~~i~~~l~~----l~------------~~~Tl~iViSKSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vav-T~~ 179 (446)
T 3ff1_A 117 HLSSTYTKELVDY----LA------------DKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFAT-TDK 179 (446)
T ss_dssp SCCHHHHHHHHHH----GG------------GCCEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE-ECS
T ss_pred CCCHHHHHHHHHh----cC------------ccceEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEE-eCC
Confidence 5677888777764 22 2335788899999766554321 11 121 11346665 776
Q ss_pred CCCCChhHHHHHHhCCCCEEEeCC
Q 021895 166 DRGPNSHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 166 ~~~~~~~~~~~A~~~gIp~~~~~~ 189 (306)
+ .+++.+.|+++||+++.++.
T Consensus 180 ~---~g~L~~~a~~~G~~~F~~~d 200 (446)
T 3ff1_A 180 E---KGALKQLATNEGYETFIVPD 200 (446)
T ss_dssp S---CSHHHHHHHHHTCEEEECCT
T ss_pred C---cchhhhHHHHcCCeEEEecc
Confidence 3 35788999999999888763
No 313
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=23.02 E-value=59 Score=28.17 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=31.4
Q ss_pred CceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 128 KYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 128 ~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
++||+|++.|. |..+...|.. .| .+|+++ .+.++ ..+ +.+.|+.+ . .. ..+.+.++|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~--~g---~~V~~~-~~~~~-----~~~-~~~~g~~~--~----~~----~~~~~~~~D 60 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLAR--AG---HQLHVT-TIGPV-----ADE-LLSLGAVN--V----ET----ARQVTEFAD 60 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHH--TT---CEEEEC-CSSCC-----CHH-HHTTTCBC--C----SS----HHHHHHTCS
T ss_pred CCEEEEEccCHHHHHHHHHHHh--CC---CEEEEE-cCHHH-----HHH-HHHcCCcc--c----CC----HHHHHhcCC
Confidence 46999999887 4444433332 23 577533 33221 222 33446421 0 11 122345899
Q ss_pred EEEEe
Q 021895 207 FLVLA 211 (306)
Q Consensus 207 ~vVlA 211 (306)
+|+++
T Consensus 61 ~vi~~ 65 (295)
T 1yb4_A 61 IIFIM 65 (295)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99997
No 314
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=22.91 E-value=3.3e+02 Score=24.26 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=40.3
Q ss_pred CCCceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 126 DPKYKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 126 ~~~~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+..+|.|.+...+ .....++.. .| ++|.++..+.++ ++++++.|..... +.. ....+++.++..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~--~G---a~Vi~~~~~~~~------~~~~~~~ga~~v~-~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKG--MG---AKVIAVVNRTAA------TEFVKSVGADIVL-PLE-EGWAKAVREATG 224 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH--TT---CEEEEEESSGGG------HHHHHHHTCSEEE-ESS-TTHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH--cC---CEEEEEeCCHHH------HHHHHhcCCcEEe-cCc-hhHHHHHHHHhC
Confidence 34456766654232 333333332 34 678777766533 5788888865433 322 223345555554
Q ss_pred --CCcEEEEec
Q 021895 204 --NTDFLVLAR 212 (306)
Q Consensus 204 --~~D~vVlA~ 212 (306)
.+|+++-+-
T Consensus 225 ~~g~Dvvid~~ 235 (342)
T 4eye_A 225 GAGVDMVVDPI 235 (342)
T ss_dssp TSCEEEEEESC
T ss_pred CCCceEEEECC
Confidence 589888653
No 315
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=22.75 E-value=1.7e+02 Score=25.77 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=41.4
Q ss_pred CceEEEEEeCC--cc-hHHHHHHhhhcCCCCeEEEEEeeCCCCCC-ChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 128 KYKVAVLASKQ--EH-CLVDFLYGWQEGKLPVEITCVISNHDRGP-NSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 128 ~~riavl~S~~--g~-~L~~ll~~~~~g~l~~~I~~Visn~~~~~-~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
++||.|.+... |. -+..|+. .| .+|.++.-+.+..+ ....++..+..++.+...+.. ..+.+.+.++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~---~g---~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~---d~~~l~~~~~ 80 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLD---AH---RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN---EQEAMEKILK 80 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHH---TT---CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT---CHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHH---CC---CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC---CHHHHHHHHh
Confidence 35777766533 23 3333433 34 67776665432100 011112234567777765532 2566777887
Q ss_pred --CCcEEEEeccC
Q 021895 204 --NTDFLVLARYM 214 (306)
Q Consensus 204 --~~D~vVlA~ym 214 (306)
++|.||.+.-.
T Consensus 81 ~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 81 EHEIDIVVSTVGG 93 (346)
T ss_dssp HTTCCEEEECCCG
T ss_pred hCCCCEEEECCch
Confidence 89999887654
No 316
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=22.56 E-value=1.6e+02 Score=27.61 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=42.6
Q ss_pred CCCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 126 DPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
-+.+||.|+++|+- -..+..++++ +..++.++ +.+ ++++..+.|.++ ++.. ....+.+.++++++
T Consensus 33 ~~~~~IlIlG~G~l--g~~~~~aa~~--lG~~v~v~--d~~--~~~p~~~~ad~~-----~~~~--~~d~~~l~~~a~~~ 97 (419)
T 4e4t_A 33 LPGAWLGMVGGGQL--GRMFCFAAQS--MGYRVAVL--DPD--PASPAGAVADRH-----LRAA--YDDEAALAELAGLC 97 (419)
T ss_dssp CTTCEEEEECCSHH--HHHHHHHHHH--TTCEEEEE--CSC--TTCHHHHHSSEE-----ECCC--TTCHHHHHHHHHHC
T ss_pred CCCCEEEEECCCHH--HHHHHHHHHH--CCCEEEEE--CCC--CcCchhhhCCEE-----EECC--cCCHHHHHHHHhcC
Confidence 35679999988862 2334444332 45666433 332 566777766432 2221 12345677777799
Q ss_pred cEEEEeccCC
Q 021895 206 DFLVLARYMQ 215 (306)
Q Consensus 206 D~vVlA~ym~ 215 (306)
|+|+ .++-.
T Consensus 98 D~V~-~~~e~ 106 (419)
T 4e4t_A 98 EAVS-TEFEN 106 (419)
T ss_dssp SEEE-ECCTT
T ss_pred CEEE-EccCc
Confidence 9988 46655
No 317
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=22.17 E-value=2.7e+02 Score=23.80 Aligned_cols=116 Identities=13% Similarity=0.095 Sum_probs=62.4
Q ss_pred EEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhhhcccceeee
Q 021895 43 GIHVFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRV 122 (306)
Q Consensus 43 ~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~elgl~~~~~rl 122 (306)
-|+-+.|...... +.+.|.++|+++.++..|... .+ ..+.+++.+.+..
T Consensus 135 ~vL~~rg~~~r~~---L~~~L~~~G~~v~~~~vY~~~------------~~--~~~~~~~~~~l~~-------------- 183 (254)
T 4es6_A 135 KVLIMRGEGGREF---LAERLRGQGVQVDYLPLYRRR------------AP--DYPAGELLARVRA-------------- 183 (254)
T ss_dssp EEEEEECSSCCCH---HHHHHHHTTCEEEEEECEEEE------------CC--CCCTTHHHHHHHH--------------
T ss_pred EEEEEcCCccHHH---HHHHHHHCCCEEEEEeEEEee------------CC--CCCHHHHHHHHHh--------------
Confidence 3555777766664 455899999999888776321 11 1123455554431
Q ss_pred cCCCCCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHH
Q 021895 123 PDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLEL 201 (306)
Q Consensus 123 ~~~~~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~ 201 (306)
...-+++|.|++. .++.+++.... ..+.....++|+.. ..+.++++|+...+++.+. ..+.+++.
T Consensus 184 ----~~~d~v~ftS~s~v~~~~~~~~~~~-~~l~~~~~~aIG~~-------Ta~~l~~~G~~~~~~a~~~--~~~~l~~a 249 (254)
T 4es6_A 184 ----ERLNGLVVSSGQGLQNLYQLAAADW-PEIGRLPLFVPSPR-------VAEMARELGAQRVIDCRGA--SAPALLAA 249 (254)
T ss_dssp ----TTCCEEECCSHHHHHHHHHHHGGGH-HHHTTSCEEESSHH-------HHHHHHHTTCSSEEECSSS--SHHHHHHH
T ss_pred ----CCCCEEEEcCHHHHHHHHHHhhHHH-HHHhCCeEEEECHH-------HHHHHHHcCCCceEECCCC--CHHHHHHH
Confidence 1223566777664 44444432210 01111123345443 5788899999887766322 24566665
Q ss_pred hc
Q 021895 202 VQ 203 (306)
Q Consensus 202 v~ 203 (306)
+.
T Consensus 250 i~ 251 (254)
T 4es6_A 250 LT 251 (254)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 318
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=22.06 E-value=3.7e+02 Score=22.89 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=56.7
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCC--EEEeCCCCCChHHHHHHHh--
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP--YHYLCAKENEREEELLELV-- 202 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp--~~~~~~k~~~~e~e~~~~v-- 202 (306)
+..||.=+++|.|.....+..+... ..+|++|=.+... -..+.+.+++.|+. +.++.. . -.+.+..+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~---~~~v~~iD~~~~~--~~~a~~~~~~~g~~~~i~~~~g--d--a~~~l~~~~~ 130 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPD---DGQVITCDINEGW--TKHAHPYWREAKQEHKIKLRLG--P--ALDTLHSLLN 130 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCT---TCEEEEEECCCSS--CCCSHHHHHHTTCTTTEEEEES--C--HHHHHHHHHH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCC---CCEEEEEECCHHH--HHHHHHHHHHcCCCCcEEEEEc--C--HHHHHHHHhh
Confidence 3458999999999766666665422 2578887666542 23457778888874 444321 1 12333333
Q ss_pred ----cCCcEEEEeccCCCCcCchhhhhhh--hhhhhhccCC
Q 021895 203 ----QNTDFLVLARYMQPVPLQKEAYLGY--KLLESLSSKG 237 (306)
Q Consensus 203 ----~~~D~vVlA~ym~~~~~~~~~~~~~--~~~~~~~~~~ 237 (306)
...|+|++-+. ++.|..+ ++..-|.|+|
T Consensus 131 ~~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG 164 (242)
T 3r3h_A 131 EGGEHQFDFIFIDAD-------KTNYLNYYELALKLVTPKG 164 (242)
T ss_dssp HHCSSCEEEEEEESC-------GGGHHHHHHHHHHHEEEEE
T ss_pred ccCCCCEeEEEEcCC-------hHHhHHHHHHHHHhcCCCe
Confidence 36899998765 2334443 3455666666
No 319
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.03 E-value=95 Score=28.22 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=14.1
Q ss_pred CCCeeEeCCCCCCCCCCCcHHH
Q 021895 256 GKDVINIHHGLLPSFKGGKPAK 277 (306)
Q Consensus 256 ~~~iINiHpsLLP~f~Ga~p~~ 277 (306)
++++|.+|.+.- +|+....++
T Consensus 86 Ggglv~~H~a~~-~~~~w~~y~ 106 (281)
T 4e5v_A 86 GGGVVIYHAADN-AFSKWPEFN 106 (281)
T ss_dssp TCEEEEEGGGGG-SCTTCHHHH
T ss_pred CCCEEEEecccc-cCCCCHHHH
Confidence 678999998664 565554443
No 320
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=22.01 E-value=2e+02 Score=25.95 Aligned_cols=70 Identities=11% Similarity=0.194 Sum_probs=34.6
Q ss_pred EEEE-EeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHH---HHHhCCCCEEEeCCCCCChHHHHHHHhcCCc
Q 021895 131 VAVL-ASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIR---FLERHGIPYHYLCAKENEREEELLELVQNTD 206 (306)
Q Consensus 131 iavl-~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~---~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D 206 (306)
-.|| -+.+++.+.-+..+++.|+ .+..++.+- | |...++. ...++|||+.++.. ..+...++++|
T Consensus 111 ~~IlT~~~s~Tv~~~l~~a~~~~~---~~~V~v~et-r-P~~qG~~~a~~L~~~gI~vtli~d------sa~~~~m~~vd 179 (276)
T 1vb5_A 111 DVIITHSFSSTVLEIIRTAKERKK---RFKVILTES-S-PDYEGLHLARELEFSGIEFEVITD------AQMGLFCREAS 179 (276)
T ss_dssp EEEECCSCCHHHHHHHHHHHHTTC---CEEEEEECC-T-TTTHHHHHHHHHHHTTCCEEEECG------GGHHHHHTTCS
T ss_pred CEEEEeCCChHHHHHHHHHHHcCC---eEEEEEeCC-C-cchhhHHHHHHHHHCCCCEEEEcH------HHHHHHHccCC
Confidence 3456 3334455554434444464 354455342 2 2222222 23448999999872 12233445677
Q ss_pred EEEEe
Q 021895 207 FLVLA 211 (306)
Q Consensus 207 ~vVlA 211 (306)
.+++.
T Consensus 180 ~vivG 184 (276)
T 1vb5_A 180 IAIVG 184 (276)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 76663
No 321
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=21.99 E-value=2.8e+02 Score=21.55 Aligned_cols=62 Identities=13% Similarity=0.046 Sum_probs=41.6
Q ss_pred CcccEEEEEEcC----CccchHHHHHHHHHhcCCe-EeEeeeeccCCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHhhh
Q 021895 39 TLTHGIHVFHCP----DEVGIVAKLSECIASRGGN-ILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFKLSKMF 113 (306)
Q Consensus 39 ~~~k~ILTViGp----DRpGIVAaVS~~LAe~G~N-IlD~sQ~id~l~G~FfMrmeVdv~~~~~~~eeLreaL~~la~el 113 (306)
.++++.|.|.=+ |-.| .+|.+.|...|.+ +.++++ |.++ .++++.+ +.++-++.++++|+++
T Consensus 14 ~~~~~~V~V~lKpgVlDPqG--~aV~~aL~~LG~~~V~~VR~------GK~~-el~~~~~----~~~~a~~~v~~mc~kL 80 (94)
T 1vq3_A 14 PLFKFAIDVQYRSNVRDPRG--ETIERVLREEKGLPVKKLRL------GKSI-HLEVEAE----NKEKAYEIVKKACEEL 80 (94)
T ss_dssp CEEEEEEEEEECTTSCCHHH--HHHHHHHHHTTCCCEEEEEE------EEEE-EEEEECS----SHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEEECCCCcCcHH--HHHHHHHHHcCCCccceeee------eeEE-EEEecCC----CHHHHHHHHHHHHHHH
Confidence 456666666532 3344 4788899999996 888888 4544 3444422 4566788899999887
No 322
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=21.72 E-value=2e+02 Score=28.00 Aligned_cols=56 Identities=21% Similarity=0.116 Sum_probs=39.2
Q ss_pred ceEEEEEeCCc--chHHHHHHhhhcCCCCeEEEEEeeCCCCC-CC--hhHHHHHHhCCCCEEEeCC
Q 021895 129 YKVAVLASKQE--HCLVDFLYGWQEGKLPVEITCVISNHDRG-PN--SHVIRFLERHGIPYHYLCA 189 (306)
Q Consensus 129 ~riavl~S~~g--~~L~~ll~~~~~g~l~~~I~~Visn~~~~-~~--~~~~~~A~~~gIp~~~~~~ 189 (306)
.||++..||.- ..+..++... | .++.||..++.-. ++ ..+.+.|++.|||+++++.
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~--g---~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~ 270 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA--G---VDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDA 270 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH--T---CEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHHc--C---CeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEEC
Confidence 58999999964 4444555443 4 5788888776421 11 3678889999999999873
No 323
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=21.69 E-value=2.1e+02 Score=24.65 Aligned_cols=73 Identities=21% Similarity=0.196 Sum_probs=41.2
Q ss_pred HHhCCCCEEEeCCCCCChHHHHHHHhc--CCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhh
Q 021895 177 LERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRS 254 (306)
Q Consensus 177 A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~ 254 (306)
++..|+++...-.......+++.+..+ ++|+||+..-.+ +++...+-.=....+++.
T Consensus 82 ~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~---------------------~~~~~~~~Gs~~~~vl~~ 140 (319)
T 3olq_A 82 YLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQH---------------------DKLGSLIFTPLDWQLLRK 140 (319)
T ss_dssp HHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC-----------------------CCSCBCCHHHHHHHHH
T ss_pred HhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcC---------------------chhhcccccccHHHHHhc
Confidence 446788876644211223456777664 899999976655 222222111123467777
Q ss_pred cCCCeeEeCCCCCCCC
Q 021895 255 YGKDVINIHHGLLPSF 270 (306)
Q Consensus 255 ~~~~iINiHpsLLP~f 270 (306)
-+.+++=+.+.-.+.+
T Consensus 141 ~~~PVlvv~~~~~~~~ 156 (319)
T 3olq_A 141 CPAPVWMVKDKEWPEY 156 (319)
T ss_dssp CSSCEEEEESSCCCTT
T ss_pred CCCCEEEecCcccccC
Confidence 7788877766555433
No 324
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=21.69 E-value=1.5e+02 Score=26.02 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=22.4
Q ss_pred HHHHHHhCCCCEEEeCCCCCChHHHHHHHhc--CCcEEEEecc
Q 021895 173 VIRFLERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARY 213 (306)
Q Consensus 173 ~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~--~~D~vVlA~y 213 (306)
+.+.|+++|.-+.++.......+.++++.+. ++|-+++...
T Consensus 86 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~ 128 (333)
T 3jvd_A 86 IQQDLKAAGYQMLVAEANSVQAQDVVMESLISIQAAGIIHVPV 128 (333)
T ss_dssp HHHHHHHHTCEEEEEECCSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHCCCEEEEECCCChHHHHHHHHHHHhCCCCEEEEcch
Confidence 3456677776666554322222334454443 7787777654
No 325
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.62 E-value=3.5e+02 Score=22.92 Aligned_cols=77 Identities=14% Similarity=0.152 Sum_probs=38.5
Q ss_pred CceEEEEEeCC--c-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHH---HHHHhCCCCEEEeCCCCCChHHHHHHH
Q 021895 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVI---RFLERHGIPYHYLCAKENEREEELLEL 201 (306)
Q Consensus 128 ~~riavl~S~~--g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~---~~A~~~gIp~~~~~~k~~~~e~e~~~~ 201 (306)
++||+|.+... | +....|+. .| .+|.++.-+....++..-. +..+..|+.+...+. ...+.+.+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~---~g---~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~---~d~~~l~~~ 74 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLD---LG---HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI---DDHASLVEA 74 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH---TT---CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCT---TCHHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh---CC---CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEecc---CCHHHHHHH
Confidence 45777776432 3 34444443 34 5676544332110011111 112345776655442 224567777
Q ss_pred hcCCcEEEEecc
Q 021895 202 VQNTDFLVLARY 213 (306)
Q Consensus 202 v~~~D~vVlA~y 213 (306)
++++|.||.+.-
T Consensus 75 ~~~~d~vi~~a~ 86 (308)
T 1qyc_A 75 VKNVDVVISTVG 86 (308)
T ss_dssp HHTCSEEEECCC
T ss_pred HcCCCEEEECCc
Confidence 778998887643
No 326
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=21.53 E-value=1.2e+02 Score=24.21 Aligned_cols=49 Identities=18% Similarity=0.373 Sum_probs=29.2
Q ss_pred HHhhhcCCCCeEEEEEeeCCCCCCC---hhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 146 LYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 146 l~~~~~g~l~~~I~~Visn~~~~~~---~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
+.+++.|+ +.++.+-+|-+ |+ .++...|+++|||+.++.. -+++-+.+.
T Consensus 29 ~kai~~gk--akLViiA~D~~--~~~~~~~l~~lc~~~~VP~~~v~s-----k~eLG~a~g 80 (121)
T 2lbw_A 29 VKALRKGE--KGLVVIAGDIW--PADVISHIPVLCEDHSVPYIFIPS-----KQDLGAAGA 80 (121)
T ss_dssp HHHHHHSC--CCEEEECTTCS--CTTHHHHHHHHHHHTCCCEEECCC-----HHHHHHHHT
T ss_pred HHHHHcCC--ceEEEEeCCCC--HHHHHHHHHHHHHhcCCcEEEECC-----HHHHHHHhC
Confidence 34444563 44443434432 43 3577889999999988752 245666665
No 327
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=21.48 E-value=3.9e+02 Score=25.08 Aligned_cols=117 Identities=12% Similarity=0.132 Sum_probs=69.3
Q ss_pred CcchHHHHHHhhh----cC--CCCeEEEEEeeCCCCC-CC---hhHHHHHHhCCCCEEEeCCCCCChH----------HH
Q 021895 138 QEHCLVDFLYGWQ----EG--KLPVEITCVISNHDRG-PN---SHVIRFLERHGIPYHYLCAKENERE----------EE 197 (306)
Q Consensus 138 ~g~~L~~ll~~~~----~g--~l~~~I~~Visn~~~~-~~---~~~~~~A~~~gIp~~~~~~k~~~~e----------~e 197 (306)
..|..|+|+|-.. .| .+. ++..+.-|++. .+ ...+..+.+.|+.+.+++.++-... ..
T Consensus 145 ~~HPtQaLaDl~Ti~e~~g~~~l~--l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d 222 (324)
T 1js1_X 145 TRHPLQSFADLITIEEYKKTARPK--VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYD 222 (324)
T ss_dssp SCCHHHHHHHHHHHHHHCSSSSCE--EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESC
T ss_pred CCCcHHHHHHHHHHHHHcCCCCee--EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECC
Confidence 3587888776531 35 443 55455222221 11 2346667788999988886543211 12
Q ss_pred HHHHhcCCcEEEEeccCCCCcCchhhhhhhhhhhhhccCCCccccccccCCHhHHhhcCCCeeEeCCCCCCCCCCC
Q 021895 198 LLELVQNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINIHHGLLPSFKGG 273 (306)
Q Consensus 198 ~~~~v~~~D~vVlA~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~l~~~~~~iINiHpsLLP~f~Ga 273 (306)
+.+.++++|+|..-+|-+ . |-.. + ..-... +.+-.++.+.++..+ +.|=.|| ||++||-
T Consensus 223 ~~eav~~aDvvy~~~w~s---~------g~~~--~--~~~~~r-~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg~ 281 (324)
T 1js1_X 223 QMKAFEGADFIYAKNWAA---Y------TGDN--Y--GQILST-DRNWTVGDRQMAVTN-NAYFMHC--LPVRRNM 281 (324)
T ss_dssp HHHHHTTCSEEEECCCCC---C------STTC--T--TCCCCC-CTTSSBCHHHHTTSS-SCEEECC--SCCCBTT
T ss_pred HHHHhCCCCEEEecCccc---C------CCcc--c--cchHHH-hcCcccCHHHHHhcC-CcEEECC--CCCCCCc
Confidence 446677999999989954 0 1000 0 000011 234468999999888 8999997 8999984
No 328
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=21.32 E-value=3.4e+02 Score=22.23 Aligned_cols=111 Identities=9% Similarity=0.142 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCc-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHH
Q 021895 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQE-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL 177 (306)
Q Consensus 99 ~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A 177 (306)
..++.+.+++.+++.|. ++.++.+... .....+++.+...+..+-| +....+ .....++.+
T Consensus 17 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI--i~~~~~--~~~~~~~~~ 78 (272)
T 3o74_A 17 YARIAKQLEQGARARGY--------------QLLIASSDDQPDSERQLQQLFRARRCDALF--VASCLP--PEDDSYREL 78 (272)
T ss_dssp HHHHHHHHHHHHHHTTC--------------EEEEEECTTCHHHHHHHHHHHHHTTCSEEE--ECCCCC--SSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCC--------------EEEEEeCCCCHHHHHHHHHHHHHcCCCEEE--EecCcc--ccHHHHHHH
Confidence 56777788877777763 3344444432 1222334444333332222 222111 124567888
Q ss_pred HhCCCCEEEeCCCCC---------ChH---HHHHHHhc---CCcEEEEeccCCCCcCchhhhhhhh
Q 021895 178 ERHGIPYHYLCAKEN---------ERE---EELLELVQ---NTDFLVLARYMQPVPLQKEAYLGYK 228 (306)
Q Consensus 178 ~~~gIp~~~~~~k~~---------~~e---~e~~~~v~---~~D~vVlA~ym~~~~~~~~~~~~~~ 228 (306)
++.|||+..+..... ... ..+.+.+. .-.+.++.+-.. .+...+|+-||+
T Consensus 79 ~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~~-~~~~~~R~~gf~ 143 (272)
T 3o74_A 79 QDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPRSIALIGARPE-LSVSQARAGGFD 143 (272)
T ss_dssp HHTTCCEEEESSCCCTTTCEEEEECHHHHHHHHHHHHHTTCCSEEEEEEECTT-SHHHHHHHHHHH
T ss_pred HHcCCCEEEEccCCCccccCEEEEchHHHHHHHHHHHHHCCCcEEEEEecCCC-CccHHHHHHHHH
Confidence 999999998874211 011 23344443 356777766433 456678888885
No 329
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=21.26 E-value=2.6e+02 Score=25.11 Aligned_cols=73 Identities=18% Similarity=0.286 Sum_probs=41.7
Q ss_pred ceEEEEEeCC-----cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 129 YKVAVLASKQ-----EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 129 ~riavl~S~~-----g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
+||+|.+-++ ||-..-|.-+ .+|. +|..+..+. . .. +.++.|.|++.++. +..+++.++++
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA---~~l~-~v~F~~~~~-~--~~----~~~~~g~~v~~l~~---~d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLA---KQYS-DVSFACLPL-E--GS----LIDEIPYPVYELSS---ESIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHH---TTCS-SEEEEECCC-T--TC----CGGGCCSCEEECSS---SCHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHH---HHHH-hCEEEEecC-c--Hh----HHHHCCCeEEEcCc---cCHHHHHHHHH
Confidence 4666666554 4544433222 2233 555554333 1 11 23345889888763 23456777775
Q ss_pred --CCcEEEEeccCC
Q 021895 204 --NTDFLVLARYMQ 215 (306)
Q Consensus 204 --~~D~vVlA~ym~ 215 (306)
++|++|+=.|--
T Consensus 67 ~~~~d~lIvD~Y~~ 80 (282)
T 3hbm_A 67 EEKFELLIIDHYGI 80 (282)
T ss_dssp HHTCSEEEEECTTC
T ss_pred hCCCCEEEEECCCC
Confidence 899999999965
No 330
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=21.02 E-value=89 Score=30.61 Aligned_cols=73 Identities=11% Similarity=0.053 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeCCcchHHHHHH-----hh---hcCC--CCeEEEEEeeCC
Q 021895 96 KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLY-----GW---QEGK--LPVEITCVISNH 165 (306)
Q Consensus 96 ~~~~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~~g~~L~~ll~-----~~---~~g~--l~~~I~~Visn~ 165 (306)
++|.+.+.+.++.+ + ++.-+.|.+|++|++.+-+.. .| +.|. ....+++|-++.
T Consensus 114 NvDp~~i~~~l~~l----~------------~~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~~vavT~~~ 177 (445)
T 1b0z_A 114 NISSTYISHLLDVL----E------------GKDLSINVISKSGTTTEPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRT 177 (445)
T ss_dssp SCCHHHHHHHHHHH----T------------TCCEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHGGGEEEEECSS
T ss_pred CCCHHHHHHHHhhC----C------------cCcEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCchhhcCEEEEEecCC
Confidence 56777777766532 1 344588999999965554321 12 1131 113566664442
Q ss_pred CCCCChhHHHHHHhCCCCEEEeC
Q 021895 166 DRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 166 ~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
..++.+.|+++||+++.++
T Consensus 178 ----~g~L~~~a~~~Gi~~F~~~ 196 (445)
T 1b0z_A 178 ----KGALKKLADQEGYETFVIP 196 (445)
T ss_dssp ----CSHHHHHHHHHTCEEEECC
T ss_pred ----cchhHHHHHHhCCeEEecc
Confidence 3478899999999888776
No 331
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=20.96 E-value=2.7e+02 Score=25.05 Aligned_cols=77 Identities=13% Similarity=0.220 Sum_probs=41.2
Q ss_pred CceEEEEEeCCc-chH-HHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCC
Q 021895 128 KYKVAVLASKQE-HCL-VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQNT 205 (306)
Q Consensus 128 ~~riavl~S~~g-~~L-~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~ 205 (306)
.++|.|+..|.+ .++ ..+++++... .++..|.....+ .-..+.++++.+. .+.+... -+++.+++..+
T Consensus 157 ~~~ILv~~GG~d~~~l~~~vl~~L~~~---~~i~vv~G~~~~-~~~~l~~~~~~~~-~v~v~~~-----~~~m~~~m~~a 226 (282)
T 3hbm_A 157 KYDFFICMGGTDIKNLSLQIASELPKT---KIISIATSSSNP-NLKKLQKFAKLHN-NIRLFID-----HENIAKLMNES 226 (282)
T ss_dssp CEEEEEECCSCCTTCHHHHHHHHSCTT---SCEEEEECTTCT-THHHHHHHHHTCS-SEEEEES-----CSCHHHHHHTE
T ss_pred CCeEEEEECCCchhhHHHHHHHHhhcC---CCEEEEECCCch-HHHHHHHHHhhCC-CEEEEeC-----HHHHHHHHHHC
Confidence 457777666654 333 4566665432 245545433321 1123444555443 4555431 12466777899
Q ss_pred cEEEEeccC
Q 021895 206 DFLVLARYM 214 (306)
Q Consensus 206 D~vVlA~ym 214 (306)
|++|.+|=+
T Consensus 227 DlvI~~gG~ 235 (282)
T 3hbm_A 227 NKLIISASS 235 (282)
T ss_dssp EEEEEESSH
T ss_pred CEEEECCcH
Confidence 999997643
No 332
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=20.93 E-value=1.3e+02 Score=24.50 Aligned_cols=50 Identities=18% Similarity=0.243 Sum_probs=29.2
Q ss_pred HHHhhhcCCCCeEEEEEeeCCCCCCC---hhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhc
Q 021895 145 FLYGWQEGKLPVEITCVISNHDRGPN---SHVIRFLERHGIPYHYLCAKENEREEELLELVQ 203 (306)
Q Consensus 145 ll~~~~~g~l~~~I~~Visn~~~~~~---~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~ 203 (306)
.+.+++.|+ +.++.+-+|-+ ++ ..+...|++++|||.++.. -+++-+.+.
T Consensus 49 v~kal~~gk--aklViiA~D~~--~~~~~~~l~~lc~~~~IP~~~v~s-----k~eLG~a~G 101 (135)
T 2aif_A 49 ATKALNRGI--AEIVLLAADAE--PLEILLHLPLVCEDKNTPYVFVRS-----KVALGRACG 101 (135)
T ss_dssp HHHHHHTTC--EEEEEEETTCS--CHHHHHHHHHHHHHTTCCEEEESC-----HHHHHHHTT
T ss_pred HHHHHHcCC--CeEEEEecCCC--hHHHHhHHHHHHHhcCCcEEEECC-----HHHHHHHhC
Confidence 344445563 44443334432 33 4566789999999998753 245666664
No 333
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=20.79 E-value=1.5e+02 Score=27.32 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=43.6
Q ss_pred CCCCceEEEEEeCC-cchHHHHHHhhhcCCCCe-EEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCCh-HHHHHHH
Q 021895 125 IDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPV-EITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENER-EEELLEL 201 (306)
Q Consensus 125 ~~~~~riavl~S~~-g~~L~~ll~~~~~g~l~~-~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~-e~e~~~~ 201 (306)
..+..+|+|.+.|. |.....++.. .| + .|.++..+.+ -+++|++.|.. +++...... .+++.++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~--~G---a~~Vi~~~~~~~------~~~~a~~lGa~--~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARL--LG---AACVIVGDQNPE------RLKLLSDAGFE--TIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--HT---CSEEEEEESCHH------HHHHHHTTTCE--EEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cC---CCEEEEEcCCHH------HHHHHHHcCCc--EEcCCCcchHHHHHHHH
Confidence 34456888887643 3444444443 34 4 6777665543 36789999983 454332222 4455555
Q ss_pred hc--CCcEEEEecc
Q 021895 202 VQ--NTDFLVLARY 213 (306)
Q Consensus 202 v~--~~D~vVlA~y 213 (306)
.. .+|+++-+--
T Consensus 250 ~~g~g~Dvvid~~g 263 (398)
T 2dph_A 250 LGKPEVDCGVDAVG 263 (398)
T ss_dssp HSSSCEEEEEECSC
T ss_pred hCCCCCCEEEECCC
Confidence 43 5899887643
No 334
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=20.77 E-value=1.9e+02 Score=28.43 Aligned_cols=57 Identities=9% Similarity=0.136 Sum_probs=36.1
Q ss_pred CCCceEEEEEeCC--cchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC
Q 021895 126 DPKYKVAVLASKQ--EHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188 (306)
Q Consensus 126 ~~~~riavl~S~~--g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~ 188 (306)
+.++||+||+|.. |++--+++.+..+ ..+|++...++. -.-..+-|++++-.+.++.
T Consensus 7 ~~~k~i~ILGSTGSIGtqtLdVi~~~pd---~f~V~aL~ag~n---v~~L~~q~~~f~p~~v~v~ 65 (406)
T 1q0q_A 7 SGMKQLTILGSTGSIGCSTLDVVRHNPE---HFRVVALVAGKN---VTRMVEQCLEFSPRYAVMD 65 (406)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHCTT---TEEEEEEEESSC---HHHHHHHHHHHCCSEEEES
T ss_pred CCceeEEEEccCcHHHHHHHHHHHhCCC---ccEEEEEEcCCC---HHHHHHHHHHhCCCEEEEc
Confidence 3467999999976 3444456654211 378888888751 2345667788887766654
No 335
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=20.75 E-value=1.9e+02 Score=24.24 Aligned_cols=64 Identities=14% Similarity=0.204 Sum_probs=0.0
Q ss_pred CCCCceEEEEEeC------CcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeC-CCCCChHHH
Q 021895 125 IDPKYKVAVLASK------QEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLC-AKENEREEE 197 (306)
Q Consensus 125 ~~~~~riavl~S~------~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~-~k~~~~e~e 197 (306)
..++.+|+|+... ...-...++.+ +.+.|+++|.-+.++. ....+.+.+
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~~~~~~g------------------------i~~~a~~~g~~~~~~~~~~~~~~~~~ 60 (292)
T 3k4h_A 5 NQTTKTLGLVMPSSASKAFQNPFFPEVIRG------------------------ISSFAHVEGYALYMSTGETEEEIFNG 60 (292)
T ss_dssp --CCCEEEEECSSCHHHHTTSTHHHHHHHH------------------------HHHHHHHTTCEEEECCCCSHHHHHHH
T ss_pred cCCCCEEEEEecCCccccccCHHHHHHHHH------------------------HHHHHHHcCCEEEEEeCCCCHHHHHH
Q ss_pred HHHHhc--CCcEEEEec
Q 021895 198 LLELVQ--NTDFLVLAR 212 (306)
Q Consensus 198 ~~~~v~--~~D~vVlA~ 212 (306)
+++.+. ++|-+|+++
T Consensus 61 ~~~~~~~~~vdgiIi~~ 77 (292)
T 3k4h_A 61 VVKMVQGRQIGGIILLY 77 (292)
T ss_dssp HHHHHHTTCCCEEEESC
T ss_pred HHHHHHcCCCCEEEEeC
No 336
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=20.71 E-value=90 Score=26.22 Aligned_cols=70 Identities=16% Similarity=0.264 Sum_probs=37.8
Q ss_pred CCceEEEEEeCCcchHHHHHHhhhcCCCCeEEEEEeeCCCCCCChh-HHHHHH---hCCCCEEEeCCCCCChH--HHHHH
Q 021895 127 PKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSH-VIRFLE---RHGIPYHYLCAKENERE--EELLE 200 (306)
Q Consensus 127 ~~~riavl~S~~g~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~-~~~~A~---~~gIp~~~~~~k~~~~e--~e~~~ 200 (306)
+++||+|+.+|++ ++ .|+. .| .|++ +.++.+ +.|+.+.+.--+++..+ +.+.+
T Consensus 4 ~~~rv~IistGdE-----~~----~G~i----------~D--sn~~~l~~~l~~l~~~G~~v~~~iv~Dd~~~I~~~l~~ 62 (178)
T 2pbq_A 4 KKAVIGVVTISDR-----AS----KGIY----------ED--ISGKAIIDYLKDVIITPFEVEYRVIPDERDLIEKTLIE 62 (178)
T ss_dssp -CCEEEEEEECHH-----HH----HTSS----------CC--HHHHHHHHHHHHHBCSCCEEEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEEEeCCc-----CC----CCCe----------ec--chHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHH
Confidence 6789999999874 22 2421 11 2333 344455 68875522111222111 34555
Q ss_pred Hhc--CCcEEEEeccCCCC
Q 021895 201 LVQ--NTDFLVLARYMQPV 217 (306)
Q Consensus 201 ~v~--~~D~vVlA~ym~~~ 217 (306)
.+. ++|+||..|=.-|.
T Consensus 63 ~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 63 LADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHTSCCSEEEEESCCSSS
T ss_pred HHhcCCCCEEEECCCCCCC
Confidence 555 69999999866533
No 337
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=20.61 E-value=3.4e+02 Score=22.90 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhhhhcccceeeecCCCCCceEEEEEeC---CcchHHHHHHhhhcCCCCeEEEEEeeCC-CCCCChhHH
Q 021895 99 REQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASK---QEHCLVDFLYGWQEGKLPVEITCVISNH-DRGPNSHVI 174 (306)
Q Consensus 99 ~eeLreaL~~la~elgl~~~~~rl~~~~~~~riavl~S~---~g~~L~~ll~~~~~g~l~~~I~~Visn~-~~~~~~~~~ 174 (306)
..++.+.+++.++++|. ++.+..+. +.......++.+...+.. +||... +.......+
T Consensus 18 ~~~~~~gi~~~a~~~g~--------------~~~~~~~~~~~~~~~~~~~i~~l~~~~vd----giii~~~~~~~~~~~~ 79 (297)
T 3rot_A 18 WTSLFQGAKKAAEELKV--------------DLQILAPPGANDVPKQVQFIESALATYPS----GIATTIPSDTAFSKSL 79 (297)
T ss_dssp HHHHHHHHHHHHHHHTC--------------EEEEECCSSSCCHHHHHHHHHHHHHTCCS----EEEECCCCSSTTHHHH
T ss_pred HHHHHHHHHHHHHHhCc--------------EEEEECCCCcCCHHHHHHHHHHHHHcCCC----EEEEeCCCHHHHHHHH
Confidence 57788888888888763 33333332 111222333333333322 222222 111124677
Q ss_pred HHHHhCCCCEEEeCCCC-C-------------ChH--HHHHHHhc-----CCcEEEEeccCCCCcCchhhhhhhh
Q 021895 175 RFLERHGIPYHYLCAKE-N-------------ERE--EELLELVQ-----NTDFLVLARYMQPVPLQKEAYLGYK 228 (306)
Q Consensus 175 ~~A~~~gIp~~~~~~k~-~-------------~~e--~e~~~~v~-----~~D~vVlA~ym~~~~~~~~~~~~~~ 228 (306)
+.+++.|||+..+.... . ..+ ..+.+.+. .-.++++.|... .+...+|+-||+
T Consensus 80 ~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~~~~i~~i~g~~~-~~~~~~R~~Gf~ 153 (297)
T 3rot_A 80 QRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPG-HIGLEKRAYGIK 153 (297)
T ss_dssp HHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHCTTCCEEEEEESCTT-CHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhcCCCceEEEEeCCCC-cHHHHHHHHHHH
Confidence 88899999999887321 1 011 22333332 246777766543 456678888885
No 338
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=20.48 E-value=1.8e+02 Score=22.75 Aligned_cols=65 Identities=18% Similarity=0.068 Sum_probs=36.1
Q ss_pred CCCCceEEEEEeCCc-chH-H-HHHHhhhcCCCCeEEEEEe-eCCCCC----------CC-----hhHHHHHHhCCCCEE
Q 021895 125 IDPKYKVAVLASKQE-HCL-V-DFLYGWQEGKLPVEITCVI-SNHDRG----------PN-----SHVIRFLERHGIPYH 185 (306)
Q Consensus 125 ~~~~~riavl~S~~g-~~L-~-~ll~~~~~g~l~~~I~~Vi-sn~~~~----------~~-----~~~~~~A~~~gIp~~ 185 (306)
..+++||.++.++.. +.+ . .+-+++++-.++++|.++- +..+.- |. ..+.+.+.++|||+.
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~ 82 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIV 82 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEE
Confidence 346778888888765 222 1 1223333444778887642 222210 11 245666778899999
Q ss_pred EeCC
Q 021895 186 YLCA 189 (306)
Q Consensus 186 ~~~~ 189 (306)
+++.
T Consensus 83 vI~~ 86 (108)
T 3nbm_A 83 ATRG 86 (108)
T ss_dssp ECCH
T ss_pred EeCH
Confidence 9883
No 339
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=20.47 E-value=1.6e+02 Score=25.19 Aligned_cols=78 Identities=10% Similarity=-0.012 Sum_probs=43.0
Q ss_pred cccCCCCCCcccEEEEEEcCCccchHHHHHHHHHhcCCeEeEeeeec-----------cCCCCeEEEEEEEEeCCCCCCH
Q 021895 31 PIESSVSPTLTHGIHVFHCPDEVGIVAKLSECIASRGGNILAADVFV-----------PEKKNVFYSRSEFIFDPIKWPR 99 (306)
Q Consensus 31 ~~~~~~~p~~~k~ILTViGpDRpGIVAaVS~~LAe~G~NIlD~sQ~i-----------d~l~G~FfMrmeVdv~~~~~~~ 99 (306)
|.+.++..-...-++.|+|.. .||=.+++..|+++|.+++=..... ....+.+. .+.+|+. +.
T Consensus 14 ~~~~~p~~~~~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~----~~ 87 (269)
T 3gk3_A 14 AQTQGPGSMQAKRVAFVTGGM-GGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFK-AYAVDVA----DF 87 (269)
T ss_dssp ----------CCCEEEETTTT-SHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCE-EEECCTT----CH
T ss_pred cCcCCchhhhcCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceE-EEEecCC----CH
Confidence 334444333334455677765 5788899999999999987654110 01112222 3344443 57
Q ss_pred HHHHHHHHHHHhhhh
Q 021895 100 EQMDEDFFKLSKMFN 114 (306)
Q Consensus 100 eeLreaL~~la~elg 114 (306)
+++++.++++.++++
T Consensus 88 ~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 88 ESCERCAEKVLADFG 102 (269)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 888888888877765
No 340
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=20.42 E-value=4e+02 Score=22.64 Aligned_cols=73 Identities=12% Similarity=0.072 Sum_probs=38.3
Q ss_pred CceEEEEEeCC--c-chHHHHHHhhhcCCCCeEEEEEeeCCCCCCChhHHHHHHhCCCCEEEeCCCCCChHHHHHHHhcC
Q 021895 128 KYKVAVLASKQ--E-HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELVQN 204 (306)
Q Consensus 128 ~~riavl~S~~--g-~~L~~ll~~~~~g~l~~~I~~Visn~~~~~~~~~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~ 204 (306)
+++|.|.+... | +....|+. .| ..+|.++.-+.+ ... .+.....|+.+...+. ...+.+.+.+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~---~g--~~~V~~~~R~~~---~~~-~~~l~~~~~~~~~~D~---~d~~~l~~~~~~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLE---DG--TFKVRVVTRNPR---KKA-AKELRLQGAEVVQGDQ---DDQVIMELALNG 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---HC--SSEEEEEESCTT---SHH-HHHHHHTTCEEEECCT---TCHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHh---cC--CceEEEEEcCCC---CHH-HHHHHHCCCEEEEecC---CCHHHHHHHHhc
Confidence 35666555433 2 33344443 23 267776654432 111 1223345776666542 124567777788
Q ss_pred CcEEEEec
Q 021895 205 TDFLVLAR 212 (306)
Q Consensus 205 ~D~vVlA~ 212 (306)
+|.||.+.
T Consensus 73 ~d~vi~~a 80 (299)
T 2wm3_A 73 AYATFIVT 80 (299)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 99988753
No 341
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=20.40 E-value=2.4e+02 Score=24.91 Aligned_cols=38 Identities=8% Similarity=0.152 Sum_probs=21.3
Q ss_pred CCCCCceEEEEEeCC-cchHHHHHHhhhcCCCCeEEEEEeeCC
Q 021895 124 DIDPKYKVAVLASKQ-EHCLVDFLYGWQEGKLPVEITCVISNH 165 (306)
Q Consensus 124 ~~~~~~riavl~S~~-g~~L~~ll~~~~~g~l~~~I~~Visn~ 165 (306)
...+++||+|++.|. |..+...|.. .+ ..++++|....
T Consensus 6 ~~~~~~~igiIG~G~~g~~~~~~l~~--~~--~~~~v~v~d~~ 44 (315)
T 3c1a_A 6 ANNSPVRLALIGAGRWGKNYIRTIAG--LP--GAALVRLASSN 44 (315)
T ss_dssp ---CCEEEEEEECTTTTTTHHHHHHH--CT--TEEEEEEEESC
T ss_pred CCCCcceEEEECCcHHHHHHHHHHHh--CC--CcEEEEEEeCC
Confidence 345678999999986 3333222222 12 37888777643
No 342
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.37 E-value=73 Score=24.77 Aligned_cols=39 Identities=21% Similarity=0.151 Sum_probs=24.0
Q ss_pred HHHHHHhCCCCEEEeCCCCCChHHHHHHHhcCCcEEEEeccCC
Q 021895 173 VIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQ 215 (306)
Q Consensus 173 ~~~~A~~~gIp~~~~~~k~~~~e~e~~~~v~~~D~vVlA~ym~ 215 (306)
+.+.|+++||++.+......+-++ .+.++|+++++-=.+
T Consensus 23 ~~~~~~~~gi~~~i~a~~~~~~~~----~~~~~Dvil~~pqv~ 61 (106)
T 1e2b_A 23 MRAQAEKYEVPVIIEAFPETLAGE----KGQNADVVLLGPQIA 61 (106)
T ss_dssp HHHHHHHSCCSEEEEEECSSSTTH----HHHHCSEEEECTTSG
T ss_pred HHHHHHHCCCCeEEEEecHHHHHh----hccCCCEEEEccchh
Confidence 567889999998664422222222 234789999875433
No 343
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=20.13 E-value=2.5e+02 Score=24.13 Aligned_cols=22 Identities=23% Similarity=-0.001 Sum_probs=10.9
Q ss_pred CCCceEEEEEeCCcchHHHHHH
Q 021895 126 DPKYKVAVLASKQEHCLVDFLY 147 (306)
Q Consensus 126 ~~~~riavl~S~~g~~L~~ll~ 147 (306)
.++++|+|+.+-+...+.+++.
T Consensus 6 ~~t~~IGvi~~~~~p~~~~~~~ 27 (302)
T 2qh8_A 6 AKTAKVAVSQIVEHPALDATRQ 27 (302)
T ss_dssp -CCEEEEEEESSCCHHHHHHHH
T ss_pred cCCcEEEEEEeccChhHHHHHH
Confidence 3567788764333333444443
No 344
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=20.10 E-value=1.2e+02 Score=26.79 Aligned_cols=11 Identities=18% Similarity=0.259 Sum_probs=6.1
Q ss_pred CCcEEEEeccC
Q 021895 204 NTDFLVLARYM 214 (306)
Q Consensus 204 ~~D~vVlA~ym 214 (306)
++|.|++.++.
T Consensus 62 ~~dgIi~~~~~ 72 (318)
T 2fqx_A 62 NMGLVVACGSF 72 (318)
T ss_dssp TCSEEEEESTT
T ss_pred CCCEEEECChh
Confidence 45666655543
Done!