BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021897
(306 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
ID +L + G FGK+YR + G++VA+K + E A
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPD--EDISQTIENVRQEAKLFA 61
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
LKH NI+ G C K C+V E+A+GG + + L+ ++ +P + V A+ +ARGM
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGM 118
Query: 252 AYVHG---LGFIHRDLKSDNLLI--------SADKSIKIADFGVARIEVQTEGMTPETGT 300
Y+H + IHRDLKS N+LI ++K +KI DFG+AR +T M+ G
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-AAGA 177
Query: 301 YRWMAP 306
Y WMAP
Sbjct: 178 YAWMAP 183
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 100/189 (52%), Gaps = 18/189 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXX 184
++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFK 56
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA 244
L +H+NI+ F+G K + IVT++ +G S+ L A K +K+
Sbjct: 57 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHL-----HASETKFEMKKL 110
Query: 245 LDVAR----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPE 297
+D+AR GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL 170
Query: 298 TGTYRWMAP 306
+G+ WMAP
Sbjct: 171 SGSILWMAP 179
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
G ++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQA 55
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL +
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-ID 113
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETG 299
A A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 300 TYRWMAP 306
+ WMAP
Sbjct: 174 SILWMAP 180
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
G ++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQA 55
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL +
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-ID 113
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETG 299
A A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 300 TYRWMAP 306
+ WMAP
Sbjct: 174 SILWMAP 180
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXX 184
++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFK 68
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA 244
L +H+NI+ F+G K + IVT++ +G S+ L A K +K+
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHL-----HASETKFEMKKL 122
Query: 245 LDVAR----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPE 297
+D+AR GM Y+H IHRDLKS+N+ + D ++KI DFG+A + + G
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 298 TGTYRWMAP 306
+G+ WMAP
Sbjct: 183 SGSILWMAP 191
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 114 LMDHRYPT------EGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILE 167
+ D+ PT +G + D+ I LN+ G+FG ++R ++G DVA+KIL
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILM 69
Query: 168 RPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL 227
+ + E+ + L+H NIV F+GA + IVTEY GS+ + L
Sbjct: 70 EQDFHAERVNEFLREVAI----MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL 125
Query: 228 TRRQNRA-VPLKLAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLISADKSIKIADFGV 284
+ R + + + A DVA+GM Y+H +HR+LKS NLL+ ++K+ DFG+
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185
Query: 285 ARIEVQT-EGMTPETGTYRWMAP 306
+R++ T GT WMAP
Sbjct: 186 SRLKASTFLSSKSAAGTPEWMAP 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 18/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
W I+ ++ + T G+FG +Y+G ++G DVA+KIL+ + PE+
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQ----FQAFRNEVAV 85
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
L +H+NI+ F+G K + IVT++ +G S+ + L ++ K + Q +D+AR
Sbjct: 86 LRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIAR 139
Query: 250 ----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYR 302
GM Y+H IHRD+KS+N+ + ++KI DFG+A ++ + G + TG+
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 303 WMAP 306
WMAP
Sbjct: 200 WMAP 203
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 114 LMDHRYPT------EGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILE 167
+ D+ PT +G + D+ I LN+ G+FG ++R ++G DVA+KIL
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILM 69
Query: 168 RPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL 227
+ + E+ + L+H NIV F+GA + IVTEY GS+ + L
Sbjct: 70 EQDFHAERVNEFLREVAI----MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL 125
Query: 228 TRRQNRA-VPLKLAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLISADKSIKIADFGV 284
+ R + + + A DVA+GM Y+H +HRDLKS NLL+ ++K+ DFG+
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Query: 285 ARIEVQTEGMTPE-TGTYRWMAP 306
+R++ + GT WMAP
Sbjct: 186 SRLKASXFLXSKXAAGTPEWMAP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFKNEV 57
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 58 GVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 115
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYRWM 304
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 116 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 305 AP 306
AP
Sbjct: 176 AP 177
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFKNEV 55
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 56 GVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 113
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYRWM 304
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 305 AP 306
AP
Sbjct: 174 AP 175
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXX 184
++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFK 80
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA 244
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIA 138
Query: 245 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTY 301
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 302 RWMAP 306
WMAP
Sbjct: 199 LWMAP 203
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXX 184
++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 25 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFK 79
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA 244
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 80 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIA 137
Query: 245 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTY 301
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 302 RWMAP 306
WMAP
Sbjct: 198 LWMAP 202
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + G FG+++ GT+NG VAIK L+ +PE
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-------FLEE 54
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ LKH +V+ + ++ IVTEY GS+ FL + RA+ L V A
Sbjct: 55 AQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQ 113
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
VA GMAY+ + +IHRDL+S N+L+ KIADFG+AR+ E + + +W
Sbjct: 114 VAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 305 AP 306
AP
Sbjct: 174 AP 175
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 171 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 224
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 225 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 342 KFPIKWTAP 350
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 171 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 224
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 225 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 342 KFPIKWTAP 350
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 18/186 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFKNEV 71
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L +H+NI+ F+G + IVT++ +G S+ L A K +K+ +D+
Sbjct: 72 GVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHL-----HASETKFEMKKLIDI 125
Query: 248 AR----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGT 300
AR GM Y+H IHRDLKS+N+ + D ++KI DFG+A + + G +G+
Sbjct: 126 ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 301 YRWMAP 306
WMAP
Sbjct: 186 ILWMAP 191
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 254 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 307
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 308 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQ 364
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 365 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 425 KFPIKWTAP 433
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFKNEV 55
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L +H+NI+ F+G + IVT++ +G S+ L + + +KL + A
Sbjct: 56 GVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 113
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYRWM 304
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 305 AP 306
AP
Sbjct: 174 AP 175
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL + N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ ++H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFKNEV 55
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 56 GVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 113
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYRWM 304
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A + + G +G+ WM
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 305 AP 306
AP
Sbjct: 174 AP 175
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 10/185 (5%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXX 184
++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFK 80
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA 244
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIA 138
Query: 245 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTY 301
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A + + G +G+
Sbjct: 139 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 302 RWMAP 306
WMAP
Sbjct: 199 LWMAP 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 2 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 55
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 56 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V + +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGA 172
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 173 KFPIKWTAP 181
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 10/185 (5%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXX 184
++ D+W I ++ +G G+FG +Y+G ++G DVA+K+L P++
Sbjct: 18 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQ----LQAFK 72
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA 244
L +H+NI+ F+G K + IVT++ +G S+ L + + +KL + A
Sbjct: 73 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIA 130
Query: 245 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTY 301
A+GM Y+H IHRDLKS+N+ + D ++KI DFG+A + + G +G+
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 302 RWMAP 306
WMAP
Sbjct: 191 LWMAP 195
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQE 54
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +V+ + ++ IVTEY GS+ FL + + L V A
Sbjct: 55 AQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E + + +W
Sbjct: 114 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 173
Query: 305 AP 306
AP
Sbjct: 174 AP 175
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQE 56
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +V+ + ++ IVTEY GS+ FL + + L V A
Sbjct: 57 AQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E + + +W
Sbjct: 116 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 175
Query: 305 AP 306
AP
Sbjct: 176 AP 177
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 172 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----- 225
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 226 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 282
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+ R+ E +
Sbjct: 283 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGA 342
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 343 KFPIKWTAP 351
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY G + FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 2 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 55
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 56 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V + +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 172
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 173 KFPIKWTAP 181
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQE 53
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +V+ + + IVTEY GS+ FL + + L V A
Sbjct: 54 AQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E + + +W
Sbjct: 113 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 172
Query: 305 AP 306
AP
Sbjct: 173 AP 174
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 171 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 224
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 225 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 342 KFPIKWTAP 350
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXXXXXXXXXXX 188
W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQEAQ 54
Query: 189 XLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L+H +V+ + ++ IVTEY GS+ FL + + L V A +A
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E + + +W AP
Sbjct: 114 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 173
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXXX 179
T+GL D W I L + QG FG+++ GT+NG VAIK L+ +PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L+H +V+ + ++ IV EY G + FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQ 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
V A +A GMAYV + ++HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 300 TY--RWMAP 306
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
ID +++ + +GAFG + + + +DVAIK +E + L+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKAFIVELRQLS 57
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL-----AVKQALD 246
+ H NIV+ GAC + C+V EYA+GGS+ L + A PL A+ L
Sbjct: 58 RVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVL----HGAEPLPYYTAAHAMSWCLQ 111
Query: 247 VARGMAYVHGL---GFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYR 302
++G+AY+H + IHRDLK NLL+ A ++ KI DFG A ++QT MT G+
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-CDIQTH-MTNNKGSAA 169
Query: 303 WMAP 306
WMAP
Sbjct: 170 WMAP 173
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
ID +++ + +GAFG + + + +DVAIK +E + L+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKAFIVELRQLS 56
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL-----AVKQALD 246
+ H NIV+ GAC + C+V EYA+GGS+ L + A PL A+ L
Sbjct: 57 RVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVL----HGAEPLPYYTAAHAMSWCLQ 110
Query: 247 VARGMAYVHGL---GFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYR 302
++G+AY+H + IHRDLK NLL+ A ++ KI DFG A ++QT MT G+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-CDIQTH-MTNNKGSAA 168
Query: 303 WMAP 306
WMAP
Sbjct: 169 WMAP 172
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 66
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 67 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 126 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 185
Query: 305 AP 306
AP
Sbjct: 186 AP 187
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 67
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 127 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 186
Query: 305 AP 306
AP
Sbjct: 187 AP 188
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 64
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 183
Query: 305 AP 306
AP
Sbjct: 184 AP 185
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 60
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 120 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 179
Query: 305 AP 306
AP
Sbjct: 180 AP 181
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 305 AP 306
AP
Sbjct: 178 AP 179
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 119 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 178
Query: 305 AP 306
AP
Sbjct: 179 AP 180
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 305 AP 306
AP
Sbjct: 178 AP 179
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 53
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 113 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 172
Query: 305 AP 306
AP
Sbjct: 173 AP 174
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 68
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 69 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 128 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 187
Query: 305 AP 306
AP
Sbjct: 188 AP 189
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 177
Query: 305 AP 306
AP
Sbjct: 178 AP 179
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 64
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 183
Query: 305 AP 306
AP
Sbjct: 184 AP 185
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
DEW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 63
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 123 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 182
Query: 305 AP 306
AP
Sbjct: 183 AP 184
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 24/184 (13%)
Query: 140 GTAFAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
G +G FG+ + T+ GE + +K L R + ++ + L+H N
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV------MRCLEHPN 68
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+++FIG K +TEY KGG++R + + + P V A D+A GMAY+H +
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARIEV----QTEGM----TPE-------TGTYR 302
IHRDL S N L+ +K++ +ADFG+AR+ V Q EG+ P+ G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 303 WMAP 306
WMAP
Sbjct: 188 WMAP 191
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + G FG+++ TYN VA+K ++
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAE 233
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ TL+H +V+ K ++ I+TE+ GS+ FL + PL + +
Sbjct: 234 ANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 292
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+SA KIADFG+AR+ E E + +W
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 352
Query: 305 AP 306
AP
Sbjct: 353 AP 354
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + G FG+++ TYN VA+K ++
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAE 60
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ TL+H +V+ K ++ I+TE+ GS+ FL + PL + +
Sbjct: 61 ANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+SA KIADFG+AR+ E E + +W
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 179
Query: 305 AP 306
AP
Sbjct: 180 AP 181
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
W +++++L + +G FG + G Y G VA+K + K
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAFLAEASV 58
Query: 190 LATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L+H N+V+ +G ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 118
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
M Y+ G F+HRDL + N+L+S D K++DFG+ + T+ +TG +W AP
Sbjct: 119 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAP 174
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXX 187
EW + L + G FG+++ G YNG VA+K L++ +P+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAEA 55
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ L+H +VR + ++ I+TEY + GS+ FL + + + A +
Sbjct: 56 NLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 114
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMA 305
A GMA++ +IHR+L++ N+L+S S KIADFG+AR+ E E + +W A
Sbjct: 115 AEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 174
Query: 306 P 306
P
Sbjct: 175 P 175
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
W +++++L + +G FG + G Y G VA+K + K
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAFLAEASV 67
Query: 190 LATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L+H N+V+ +G ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
M Y+ G F+HRDL + N+L+S D K++DFG+ + T+ +TG +W AP
Sbjct: 128 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAP 183
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
W +++++L + +G FG + G Y G VA+K + K
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAFLAEASV 239
Query: 190 LATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L+H N+V+ +G ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
M Y+ G F+HRDL + N+L+S D K++DFG+ + T+ +TG +W AP
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAP 355
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
W +++++L + +G FG + G Y G VA+K + K
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI--------KNDATAQAFLAEASV 52
Query: 190 LATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L+H N+V+ +G ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 112
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
M Y+ G F+HRDL + N+L+S D K++DFG+ + T+ +TG +W AP
Sbjct: 113 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAP 168
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
D W + L + G G+++ G YNG VA+K L++ +P+
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMA++ +IHRDL++ N+L+S S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT 177
Query: 305 AP 306
AP
Sbjct: 178 AP 179
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
D W I + + G FG+++ G YN VA+K L +P +A
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANL--- 61
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ TL+H +VR + I+TEY GS+ FL + V L + +
Sbjct: 62 ---MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 118
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWM 304
+A GMAY+ +IHRDL++ N+L+S KIADFG+AR+ E E + +W
Sbjct: 119 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 178
Query: 305 AP 306
AP
Sbjct: 179 AP 180
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 60
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RW 303
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ P + +W
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 304 MAP 306
AP
Sbjct: 181 TAP 183
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 59
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RW 303
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ P + +W
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 304 MAP 306
AP
Sbjct: 180 TAP 182
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 122 EGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXX 181
+G NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 13 QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VE 67
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAV 241
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + +
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 127
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT- 300
A ++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 128 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTA 181
Query: 301 -------YRWMAP 306
+W AP
Sbjct: 182 HAGAKFPIKWTAP 194
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXX 186
D W I L + G FG+++ TYN VA+K ++
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAE 227
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ TL+H +V+ K ++ I+TE+ GS+ FL + PL + +
Sbjct: 228 ANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 286
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
+A GMA++ +IHRDL++ N+L+SA KIADFG+AR+
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
G NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEE 55
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-- 300
A ++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAH 169
Query: 301 ------YRWMAP 306
+W AP
Sbjct: 170 AGAKFPIKWTAP 181
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
G NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEE 55
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-- 300
A ++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAH 169
Query: 301 ------YRWMAP 306
+W AP
Sbjct: 170 AGAKFPIKWTAP 181
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
+W ID +L G FG ++ G + N + VAIK + + E
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEA 54
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ L H +V+ G C ++ C+VTE+ + G + +L R Q + + LDV
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 113
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWM 304
GMAY+ IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWA 172
Query: 305 AP 306
+P
Sbjct: 173 SP 174
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 63
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 177
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 178 KFPIKWTAP 186
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W ++ L +G +G FG+++ G ++ + + E P
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD---LKAKFLQEA 163
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L H NIVR IG C ++ IV E +GG FL R + + +K ++ D
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDA 222
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR----- 302
A GM Y+ IHRDL + N L++ +KI+DFG++R E +G+ +G R
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE--ADGVXAASGGLRQVPVK 280
Query: 303 WMAP 306
W AP
Sbjct: 281 WTAP 284
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXXX 188
W I + + G FG+++ G YN VA+K L +P +A
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANL----- 60
Query: 189 XLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ TL+H +VR K I+TE+ GS+ FL + V L + + +A
Sbjct: 61 -MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 119
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
GMAY+ +IHRDL++ N+L+S KIADFG+AR+ E E + +W AP
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 179
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 63
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHAGA 177
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 178 KFPIKWTAP 186
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 60
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 174
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 175 KFPIKWTAP 183
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 63
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 177
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 178 KFPIKWTAP 186
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 60
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 174
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 175 KFPIKWTAP 183
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 63
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 177
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 178 KFPIKWTAP 186
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W ++ L +G +G FG+++ G ++ + + E P
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD---LKAKFLQEA 163
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L H NIVR IG C ++ IV E +GG FL R + + +K ++ D
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDA 222
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR----- 302
A GM Y+ IHRDL + N L++ +KI+DFG++R E +G+ +G R
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE--ADGVYAASGGLRQVPVK 280
Query: 303 WMAP 306
W AP
Sbjct: 281 WTAP 284
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 58
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 172
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 173 KFPIKWTAP 181
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 58
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 172
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 173 KFPIKWTAP 181
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 62
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 176
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 177 KFPIKWTAP 185
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 199 DIHHIDYYKKTTNGRLP----VKWMAP 221
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
G NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEE 55
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
+ +KH N+V+ +G C + + I+ E+ G++ +L + V + +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-- 300
A ++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAH 169
Query: 301 ------YRWMAP 306
+W AP
Sbjct: 170 AGAKFPIKWTAP 181
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
G NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEE 55
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
+ +KH N+V+ +G C + + I+ E+ G++ +L + V + +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-- 300
A ++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAH 169
Query: 301 ------YRWMAP 306
+W AP
Sbjct: 170 AGAKFPIKWTAP 181
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 121
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 122 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 240 DIHHIDYYKKTTNGRLP----VKWMAP 262
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL--- 237
+ KH NI+ +GAC + ++ EYA G++R++L R+ +
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 238 -----------KLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 199 DIHHIDXXKKTTNGRLP----VKWMAP 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 265
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHR+L + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 379
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 380 KFPIKWTAP 388
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 199 DIHHIDYYKKTTNGRLP----VKWMAP 221
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 59
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+ E+ G++ +L + V + + A
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHAGA 173
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 174 KFPIKWTAP 182
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 73
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 74 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 192 DIHHIDYYKKTTNGRLP----VKWMAP 214
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 72
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 73 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 191 DIHHIDYYKKTTNGRLP----VKWMAP 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 262
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHR+L + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 376
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 377 KFPIKWTAP 385
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
+W ID +L G FG ++ G + N + VAIK + + E
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEA 56
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ L H +V+ G C ++ C+V E+ + G + +L R Q + + LDV
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 115
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWM 304
GMAY+ IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWA 174
Query: 305 AP 306
+P
Sbjct: 175 SP 176
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 69
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 70 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 188 DIHHIDYYKKTTNGRLP----VKWMAP 210
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 199 DIHHIDYYKKTTNGRLP----VKWMAP 221
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXX 180
W + +L +G +GAFG++ G D VA+K+L+ + EK
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 65
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ--------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 66 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 232 -----NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ K V A VARGM Y+ IHRDL + N+L++ D +KIADFG+AR
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 287 -------IEVQTEGMTPETGTYRWMAP 306
+ T G P +WMAP
Sbjct: 184 DIHHIDYYKKTTNGRLP----VKWMAP 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 304
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHR+L + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 418
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 419 KFPIKWTAP 427
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDXXKKTTNGRLP----VKWMAP 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDXXKKTTNGRLP----VKWMAP 228
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
NYD+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLK 63
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +KH N+V+ +G C + + I+ E+ G++ +L + V + + A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT----- 300
++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGA 177
Query: 301 ---YRWMAP 306
+W AP
Sbjct: 178 KFPIKWTAP 186
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W ++ + M G FG++Y G + + + + E+ E
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLKEA 58
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT------- 300
+ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHAGAKF 172
Query: 301 -YRWMAP 306
+W AP
Sbjct: 173 PIKWTAP 179
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKNTTNGRLP----VKWMAP 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +G FG++ G D VA+K+L+ ++ EK
Sbjct: 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 132
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 133 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 251 RDINNIDYYKKTTNGRLP----VKWMAP 274
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXX 179
T GL Y W ID + L G FG + G + G+ DVAIK+++ + ++
Sbjct: 11 TAGL-GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---- 65
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L H +V+ G C K+ I+TEY G + +L ++R +L
Sbjct: 66 ---FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
++ DV M Y+ F+HRDL + N L++ +K++DFG++R + E +
Sbjct: 123 -LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS 181
Query: 300 TY--RWMAP 306
+ RW P
Sbjct: 182 KFPVRWSPP 190
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXX 179
T GL Y W ID + L G FG + G + G+ DVAIK+++ + ++
Sbjct: 11 TAGL-GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---- 65
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L H +V+ G C K+ I+TEY G + +L ++R +L
Sbjct: 66 ---FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
++ DV M Y+ F+HRDL + N L++ +K++DFG++R + E T G
Sbjct: 123 -LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVG 180
Query: 300 T---YRWMAP 306
+ RW P
Sbjct: 181 SKFPVRWSPP 190
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + ++IADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +G FG++ G D VA+K+L+ ++ EK
Sbjct: 18 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 75
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 76 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 134 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 194 RDINNIDYYKKTTNGRLP----VKWMAP 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 121 TEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXX 179
T GL Y W ID + L G FG + G + G+ DVAIK+++ + ++
Sbjct: 2 TAGL-GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---- 56
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ L H +V+ G C K+ I+TEY G + +L ++R +L
Sbjct: 57 ---FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 113
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG 299
++ DV M Y+ F+HRDL + N L++ +K++DFG++R + E T G
Sbjct: 114 -LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVG 171
Query: 300 T---YRWMAP 306
+ RW P
Sbjct: 172 SKFPVRWSPP 181
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +G FG++ G D VA+K+L+ ++ EK
Sbjct: 16 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 73
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 74 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 132 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 192 RDINNIDYYKKTTNGRLP----VKWMAP 215
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +G FG++ G D VA+K+L+ ++ EK
Sbjct: 21 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 78
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 79 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 137 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 197 RDINNIDYYKKTTNGRLP----VKWMAP 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ E+
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEEDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
++ + G FG + G + G+ DVA+K+++ + ++ + L
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE-------FFQEAQTMMKL 60
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H +V+F G C K IVTEY G + +L R + + ++ DV GMA+
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
+ FIHRDL + N L+ D +K++DFG+ R V + GT +W AP
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAP 174
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLKEA 58
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ +KH N+V+ +G C + + I+TE+ G++ +L + V + + A +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWM 304
+ M Y+ FIHRDL + N L+ + +K+ADFG++R+ + + T G +W
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWT 177
Query: 305 AP 306
AP
Sbjct: 178 AP 179
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 65
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++TE+ K G++ +L ++N VP
Sbjct: 66 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 184 GLAR-DIXKDPDXVRKGDARLPLKWMAP 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 124 LENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXX 183
++ D+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-----VEEF 75
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ 243
+ +KH N+V+ +G C + IVTEY G++ +L V + +
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT--- 300
A ++ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL------MTGDTYTAHA 189
Query: 301 -----YRWMAP 306
+W AP
Sbjct: 190 GAKFPIKWTAP 200
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ YA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAXXXXX 181
+W +LN+G +GAFG++ G D VA+K+L+ + E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH----RA 76
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA 240
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP K
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 241 VKQAL----------DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
K L VA+GM ++ IHRDL + N+L+S +KI DFG+AR ++
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIY 195
Query: 291 TEGMTPETGTYR----WMAP 306
+ G R WMAP
Sbjct: 196 KDPDYVRKGDARLPLKWMAP 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXXX 188
W ID + L G FG + G + G+ DVAIK+++ + ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-------FIEEAK 56
Query: 189 XLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L H +V+ G C K+ I+TEY G + +L ++R +L ++ DV
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVC 115
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 306
M Y+ F+HRDL + N L++ +K++DFG++R + E + + RW P
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPP 175
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 65
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++TE+ K G++ +L ++N VP
Sbjct: 66 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 184 GLAR-DIYKDPDYVRKGDARLPLKWMAP 210
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 65
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++TE+ K G++ +L ++N VP
Sbjct: 66 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 184 GLAR-DIYKDPDYVRKGDARLPLKWMAP 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAXXXXX 181
+W +LN+G +GAFG++ G D VA+K+L+ + E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH----RA 76
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA 240
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP K
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 241 VKQAL----------DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
K L VA+GM ++ IHRDL + N+L+S +KI DFG+AR ++
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIY 195
Query: 291 TEGMTPETGTYR----WMAP 306
+ G R WMAP
Sbjct: 196 KDPDYVRKGDARLPLKWMAP 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXXX 188
W ID + L G FG + G + G+ DVAIK+++ + ++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-------FIEEAK 55
Query: 189 XLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L H +V+ G C K+ I+TEY G + +L ++R +L ++ DV
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVC 114
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMA 305
M Y+ F+HRDL + N L++ +K++DFG++R + E T G+ RW
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSP 173
Query: 306 P 306
P
Sbjct: 174 P 174
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 131 TIDLRKLNMGTAFAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
ID +L G FG ++ G + N + VAIK + + E
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEAEV 55
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ L H +V+ G C ++ C+V E+ + G + +L R Q + + LDV
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 114
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
GMAY+ IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 115 GMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 173
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXX 179
+W KL +G +GAFG++ G D VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 180 XXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ-------- 231
+ KH NI+ +GAC + ++ YA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 232 --NRAVPLKLAVKQALD----VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
NR ++ K + +ARGM Y+ IHRDL + N+L++ + +KIADFG+A
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 286 R-------IEVQTEGMTPETGTYRWMAP 306
R + T G P +WMAP
Sbjct: 205 RDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXXX 188
W ID + L G FG + G + G+ DVAIK+++ + ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-------FIEEAK 56
Query: 189 XLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+ L H +V+ G C K+ I+TEY G + +L ++R +L ++ DV
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVC 115
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMA 305
M Y+ F+HRDL + N L++ +K++DFG++R + E T G+ RW
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSP 174
Query: 306 P 306
P
Sbjct: 175 P 175
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 131 TIDLRKLNMGTAFAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
ID +L G FG ++ G + N + VAIK + + E
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEAEV 55
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ L H +V+ G C ++ C+V E+ + G + +L R Q + + LDV
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 114
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
GMAY+ IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 173
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
EW I +L +G +G FG++Y G ++GE VAI++++ +N ++
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQ 85
Query: 189 XLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
+H N+V F+GAC I+T KG ++ + R + + + A ++
Sbjct: 86 T----RHENVVLFMGACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIV 140
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
+GM Y+H G +H+DLKS N+ K + I DFG+ I
Sbjct: 141 KGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGLFSI 178
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 131 TIDLRKLNMGTAFAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
ID +L G FG ++ G + N + VAIK + + E
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEAEV 53
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ L H +V+ G C ++ C+V E+ + G + +L R Q + + LDV
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 112
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
GMAY+ IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 113 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 171
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 32/207 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +LN+G +GAFG++ G D VA+K+L+ + E
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 75
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 76 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 237 LKLA-------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
K + + VA+GM ++ IHRDL + N+L+S +KI DFG
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 284 VARIEVQTEGMTPETGTYR----WMAP 306
+AR ++ + G R WMAP
Sbjct: 194 LAR-DIXKDPDXVRKGDARLPLKWMAP 219
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 74
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 75 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 193 GLAR-DIXKDPDXVRKGDARLPLKWMAP 219
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 96 FRPGKVTHALNDDALAQALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGT 155
+ G ++ ++ D L R P + +W +L +G +GAFG++
Sbjct: 29 LKTGYLSIVMDPDELPLDEHCERLPYDA----SKWEFPRDRLKLGKPLGRGAFGQVIEAD 84
Query: 156 YNGED-------VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKR 208
G D VA+K+L+ + E + HLN+V +GAC K
Sbjct: 85 AFGIDKTATCRTVAVKMLKEGATHSEH----RALMSELKILIHIGHHLNVVNLLGACTKP 140
Query: 209 M-VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--------------VKQALDVARGMAY 253
++ E+ K G++ +L ++N VP K+A + + VA+GM +
Sbjct: 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 200
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR----WMAP 306
+ IHRDL + N+L+S +KI DFG+AR ++ + G R WMAP
Sbjct: 201 LASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAP 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
D+W ++ + M G +G++Y G + + + + E+ E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----VEEFLKEA 58
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ +KH N+V+ +G C + + I+ E+ G++ +L + V + + A +
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT------- 300
+ M Y+ FIHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHAGAKF 172
Query: 301 -YRWMAP 306
+W AP
Sbjct: 173 PIKWTAP 179
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 131 TIDLRKLNMGTAFAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXX 189
ID +L G FG ++ G + N + VAIK ++ + +
Sbjct: 23 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD-------FIEEAEV 75
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ L H +V+ G C ++ C+V E+ + G + +L R Q + + LDV
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 134
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
GMAY+ IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 135 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 193
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 65
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 66 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 184 GLAR-DIXKDPDXVRKGDARLPLKWMAP 210
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 74
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 75 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 193 GLAR-DIYKDPDXVRKGDARLPLKWMAP 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 143 FAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
+G FGK+ Y+ GE VA+K L+ PE L L H
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-----PESGGNHIADLKKEIEILRNLYHE 83
Query: 197 NIVRFIGACRKRMVWCI--VTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
NIV++ G C + I + E+ GS++++L + +N+ + LK +K A+ + +GM Y+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYL 142
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMT---PETGTYRWMAP 306
++HRDL + N+L+ ++ +KI DFG+ + IE E T W AP
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 143 FAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
+G FGK+ Y+ GE VA+K L+ PE L L H
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-----PESGGNHIADLKKEIEILRNLYHE 71
Query: 197 NIVRFIGACRKRMVWCI--VTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
NIV++ G C + I + E+ GS++++L + +N+ + LK +K A+ + +GM Y+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYL 130
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMT---PETGTYRWMAP 306
++HRDL + N+L+ ++ +KI DFG+ + IE E T W AP
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 74
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 75 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 237 LKLA--------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADF 282
K+A + + VA+GM ++ IHRDL + N+L+S +KI DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 283 GVARIEVQTEGMTPETGTYR----WMAP 306
G+AR ++ + G R WMAP
Sbjct: 193 GLAR-DIYKDPDYVRKGDARLPLKWMAP 219
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 63 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 114
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 174
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 175 ETDXXRKGGKGLLP----VRWMSP 194
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 72 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 184 ETDXXRKGGKGLLP----VRWMSP 203
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 78 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 129
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 190 ETDYYRKGGKGLLP----VRWMSP 209
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 71 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 183 ETDYYRKGGKGLLP----VRWMSP 202
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH-- 76
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 77 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 237 ------------LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGV 284
L+ + + VA+GM ++ IHRDL + N+L+S +KI DFG+
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 285 ARIEVQTEGMTPETGTYR----WMAP 306
AR ++ + G R WMAP
Sbjct: 195 AR-DIXKDPDXVRKGDARLPLKWMAP 219
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 104 ALNDDALAQALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED--- 160
A++ D L R P + +W +L +G +GAFG++ G D
Sbjct: 2 AMDPDELPLDEHCERLPYDA----SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA 57
Query: 161 ----VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM-VWCIVT 215
VA+K+L+ + E + HLN+V +GAC K ++
Sbjct: 58 TCRTVAVKMLKEGATHSEH----RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 216 EYAKGGSVRQFLTRRQNRAVPLKLA--------------VKQALDVARGMAYVHGLGFIH 261
E+ K G++ +L ++N VP K A + + VA+GM ++ IH
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 173
Query: 262 RDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR----WMAP 306
RDL + N+L+S +KI DFG+AR ++ + G R WMAP
Sbjct: 174 RDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAP 221
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 72 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 184 ETDYYRKGGKGLLP----VRWMSP 203
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 65 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 176
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 177 ETDYYRKGGKGLLP----VRWMSP 196
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 71 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 183 ETDYYRKGGKGLLP----VRWMSP 202
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 100 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 151
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 212 ETDYYRKGGKGLLP----VRWMSP 231
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 69 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 181 ETDYYRKGGKGLLP----VRWMSP 200
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 127 YD-EWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXX 178
YD +W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 14 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLT 68
Query: 179 XXXXXXXXXXXLATL-KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL 237
L+ L H+NIV +GAC ++TEY G + FL R+++ +
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 238 KLA----------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIAD 281
K + + + VA+GMA++ IHRDL + N+L++ + KI D
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188
Query: 282 FGVARIEVQTEGMTPETGTYR----WMAP 306
FG+AR +++ + G R WMAP
Sbjct: 189 FGLAR-DIKNDSNYVVKGNARLPVKWMAP 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 62
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 291 TE-------GMTPETGTYRWMAP 306
T+ G+ P RWMAP
Sbjct: 183 TDXXRKGGKGLLP----VRWMAP 201
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 59
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R +
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 291 TE-------GMTPETGTYRWMAP 306
T+ G+ P RWMAP
Sbjct: 180 TDXXRKGGKGLLP----VRWMAP 198
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKFSLDLASLI 114
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 302 --RWMAP 306
+WMAP
Sbjct: 175 PIKWMAP 181
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG---ED----VAIKILERPENN 172
PT+ L ++W L G GAFGK+ T G ED VA+K+L+ +
Sbjct: 24 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 82
Query: 173 PEKAXXXXXXXXXXXXXLATLKHL----NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT 228
EK L + HL NIV +GAC ++TEY G + FL
Sbjct: 83 DEKEALMSE--------LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 134
Query: 229 RR--------QNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIA 280
R+ R + L+ + + VA+GMA++ IHRD+ + N+L++ KI
Sbjct: 135 RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 194
Query: 281 DFGVARIEVQTEGMTPETGTYR----WMAP 306
DFG+AR ++ + G R WMAP
Sbjct: 195 DFGLAR-DIMNDSNYIVKGNARLPVKWMAP 223
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 62
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 291 TE-------GMTPETGTYRWMAP 306
T+ G+ P RWMAP
Sbjct: 183 TDXXRKGGKGLLP----VRWMAP 201
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 127 YD-EWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXX 178
YD +W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 30 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLT 84
Query: 179 XXXXXXXXXXXLATL-KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL 237
L+ L H+NIV +GAC ++TEY G + FL R+++ +
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 238 KLA----------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIAD 281
K + + + VA+GMA++ IHRDL + N+L++ + KI D
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 204
Query: 282 FGVARIEVQTEGMTPETGTYR----WMAP 306
FG+AR +++ + G R WMAP
Sbjct: 205 FGLAR-DIKNDSNYVVKGNARLPVKWMAP 232
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 62
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 291 TE-------GMTPETGTYRWMAP 306
T+ G+ P RWMAP
Sbjct: 183 TDYYRKGGKGLLP----VRWMAP 201
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ----NR 233
+ +K N +VR +G + ++ E G ++ +L + N
Sbjct: 78 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 129
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 130 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 190 ETDYYRKGGKGLLP----VRWMSP 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 127 YD-EWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXX 178
YD +W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 32 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLT 86
Query: 179 XXXXXXXXXXXLATL-KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL 237
L+ L H+NIV +GAC ++TEY G + FL R+++ +
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 238 KLA----------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIAD 281
K + + + VA+GMA++ IHRDL + N+L++ + KI D
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 206
Query: 282 FGVARIEVQTEGMTPETGTYR----WMAP 306
FG+AR +++ + G R WMAP
Sbjct: 207 FGLAR-DIKNDSNYVVKGNARLPVKWMAP 234
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 127 YD-EWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXX 178
YD +W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 37 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLT 91
Query: 179 XXXXXXXXXXXLATL-KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL 237
L+ L H+NIV +GAC ++TEY G + FL R+++ +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 238 KLA----------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIAD 281
K + + + VA+GMA++ IHRDL + N+L++ + KI D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 282 FGVARIEVQTEGMTPETGTYR----WMAP 306
FG+AR +++ + G R WMAP
Sbjct: 212 FGLAR-DIKNDSNYVVKGNARLPVKWMAP 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG---ED----VAIKILERPENN 172
PT+ L ++W L G GAFGK+ T G ED VA+K+L+ +
Sbjct: 32 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 173 PEKAXXXXXXXXXXXXXLATLKHL----NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT 228
EK L + HL NIV +GAC ++TEY G + FL
Sbjct: 91 DEKEALMSE--------LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 229 RR--------QNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIA 280
R+ R + L+ + + VA+GMA++ IHRD+ + N+L++ KI
Sbjct: 143 RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 202
Query: 281 DFGVARIEVQTEGMTPETGTYR----WMAP 306
DFG+AR ++ + G R WMAP
Sbjct: 203 DFGLAR-DIMNDSNYIVKGNARLPVKWMAP 231
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFL----TRRQNR 233
+ +K N +VR +G + ++ E G ++ +L +N
Sbjct: 65 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N ++ D ++KI DFG+ R
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 177 ETDYYRKGGKGLLP----VRWMSP 196
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXX 180
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 181 XXXXXXXXXLATLKHLN---IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ----NR 233
+ +K N +VR +G + ++ E G ++ +L + N
Sbjct: 68 EA--------SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 119
Query: 234 AV--PLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV 289
V P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 290 QTE-------GMTPETGTYRWMAP 306
+T+ G+ P RWM+P
Sbjct: 180 ETDYYRKGGKGLLP----VRWMSP 199
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + + +G FG+++RG + GE+VA+KI E L+
Sbjct: 29 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-------WFREAEIYQTVMLR 81
Query: 195 HLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI A K +W +V++Y + GS+ +L R V ++ +K AL A
Sbjct: 82 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 137
Query: 250 GMAYVH--------GLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGM----TP 296
G+A++H HRDLKS N+L+ + + IAD G+A R + T+ +
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 198 RVGTKRYMAP 207
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 444 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKFSLDLASLI 494
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+SA +K+ DFG++R + G
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 302 --RWMAP 306
+WMAP
Sbjct: 555 PIKWMAP 561
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + + +G FG+++RG + GE+VA+KI E L+
Sbjct: 9 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-------WFREAEIYQTVMLR 61
Query: 195 HLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI A K +W +V++Y + GS+ +L R V ++ +K AL A
Sbjct: 62 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 117
Query: 250 GMAYVH--------GLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGM----TP 296
G+A++H HRDLKS N+L+ + + IAD G+A R + T+ +
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 178 RVGTKRYMAP 187
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 101 VTHALNDDALAQALMDHRYPT---EGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN 157
+T + D LA L+DH + GL + T+ R++ + +G +G+++RG++
Sbjct: 2 MTTNVGDSTLAD-LLDHSCTSGSGSGLPFLVQRTV-ARQITLLECVGKGRYGEVWRGSWQ 59
Query: 158 GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGA-----CRKRMVWC 212
GE+VA+KI + EK+ L+H NI+ FI + +W
Sbjct: 60 GENVAVKIF---SSRDEKSWFRETELYNT----VMLRHENILGFIASDMTSRHSSTQLW- 111
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF--------IHRDL 264
++T Y + GS+ +L Q + ++ L +A G+A++H F HRDL
Sbjct: 112 LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 168
Query: 265 KSDNLLISADKSIKIADFGVARIEVQTE-----GMTPETGTYRWMAP 306
KS N+L+ + IAD G+A + Q+ G P GT R+MAP
Sbjct: 169 KSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + + +G FG+++RG + GE+VA+KI E L+
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-------SWFREAEIYQTVMLR 94
Query: 195 HLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI A K +W +V++Y + GS+ +L R V ++ +K AL A
Sbjct: 95 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 150
Query: 250 GMAYVH--------GLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGM----TP 296
G+A++H HRDLKS N+L+ + + IAD G+A R + T+ +
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 211 RVGTKRYMAP 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 444 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKFSLDLASLI 494
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 302 --RWMAP 306
+WMAP
Sbjct: 555 PIKWMAP 561
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKFSLDLASLI 114
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+SA +K+ DFG++R + G
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 302 --RWMAP 306
+WMAP
Sbjct: 175 PIKWMAP 181
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGE-DVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
ID + L G FG + G + G+ DVAIK+++ + ++ +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-------FIEEAKVM 53
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
L H +V+ G C K+ I+TEY G + +L ++R +L ++ DV
Sbjct: 54 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEA 112
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
M Y+ F+HRDL + N L++ +K++DFG++R + E T G+ RW P
Sbjct: 113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPP 170
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + + +G FG+++RG + GE+VA+KI E L+
Sbjct: 4 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-------WFREAEIYQTVMLR 56
Query: 195 HLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI A K +W +V++Y + GS+ +L R V ++ +K AL A
Sbjct: 57 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 112
Query: 250 GMAYVH--------GLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGM----TP 296
G+A++H HRDLKS N+L+ + + IAD G+A R + T+ +
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 173 RVGTKRYMAP 182
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + + +G FG+++RG + GE+VA+KI E L+
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-------WFREAEIYQTVMLR 55
Query: 195 HLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI A K +W +V++Y + GS+ +L R V ++ +K AL A
Sbjct: 56 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 111
Query: 250 GMAYVH--------GLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGM----TP 296
G+A++H HRDLKS N+L+ + + IAD G+A R + T+ +
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 172 RVGTKRYMAP 181
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 62
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 291 T-------EGMTPETGTYRWMAP 306
T +G+ P RWMAP
Sbjct: 183 TAYYRKGGKGLLP----VRWMAP 201
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R++ + +G +G+++RG ++GE VA+KI + L+
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQ-------SWFRETEIYNTVLLR 60
Query: 195 HLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI + +W ++T Y + GS+ FL Q + + LA++ A+ A
Sbjct: 61 HDNILGFIASDMTSRNSSTQLW-LITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAAC 116
Query: 250 GMAYVHGLGF--------IHRDLKSDNLLISADKSIKIADFGVARIEVQTE-----GMTP 296
G+A++H F HRD KS N+L+ ++ IAD G+A + Q G P
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 177 RVGTKRYMAP 186
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + + +G FG+++RG + GE+VA+KI E L+
Sbjct: 6 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-------WFREAEIYQTVMLR 58
Query: 195 HLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI A K +W +V++Y + GS+ +L R V ++ +K AL A
Sbjct: 59 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 114
Query: 250 GMAYVH--------GLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGM----TP 296
G+A++H HRDLKS N+L+ + + IAD G+A R + T+ +
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 175 RVGTKRYMAP 184
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 127 YD-EWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXX 178
YD +W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 37 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLT 91
Query: 179 XXXXXXXXXXXLATL-KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL 237
L+ L H+NIV +GAC ++TEY G + FL R+++ +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 238 KLA----------------VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIAD 281
K + + + VA+GMA++ IHRDL + N+L++ + KI D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 282 FGVARIEVQTEGMTPETGTYR----WMAP 306
FG+AR ++ + G R WMAP
Sbjct: 212 FGLAR-HIKNDSNYVVKGNARLPVKWMAP 239
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 114
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 302 --RWMAP 306
+WMAP
Sbjct: 175 PIKWMAP 181
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 92 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 142
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 143 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 302 --RWMAP 306
+WMAP
Sbjct: 203 PIKWMAP 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 114
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 302 --RWMAP 306
+WMAP
Sbjct: 175 PIKWMAP 181
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 67 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 117
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 118 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 302 --RWMAP 306
+WMAP
Sbjct: 178 PIKWMAP 184
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 69 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 119
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 120 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 302 --RWMAP 306
+WMAP
Sbjct: 180 PIKWMAP 186
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 61 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 111
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 112 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 171
Query: 302 --RWMAP 306
+WMAP
Sbjct: 172 PIKWMAP 178
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXX 183
++ I ++ +G +G FG +++G Y + VAIK + ++ +
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 184 XXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA--V 241
+ H +IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 66 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKYSLDLASLI 116
Query: 242 KQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY 301
A ++ +AY+ F+HRD+ + N+L+S++ +K+ DFG++R + G
Sbjct: 117 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 302 --RWMAP 306
+WMAP
Sbjct: 177 PIKWMAP 183
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 112 QALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDV--AIKILERP 169
Q++ + + T L D W I +G GAFGK+Y+ V A K+++
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEI------IG-ELGDGAFGKVYKAQNKETSVLAAAKVIDT- 72
Query: 170 ENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTR 229
K+ LA+ H NIV+ + A I+ E+ GG+V +
Sbjct: 73 -----KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 230 --RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
R +++ KQ LD + Y+H IHRDLK+ N+L + D IK+ADFGV+
Sbjct: 128 LERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Query: 288 EVQT-EGMTPETGTYRWMAP 306
+T + GT WMAP
Sbjct: 185 NTRTIQRRDSFIGTPYWMAP 204
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
G E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 1 GSEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 54
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L + + R
Sbjct: 55 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 114
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 115 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 174 XKVKEPGESPIFWYAP 189
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 29 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 82
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L + + R
Sbjct: 83 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 142
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 143 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 201
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 202 XKVKEPGESPIFWYAP 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 2 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 55
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L + + R
Sbjct: 56 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 115
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 116 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 175 XKVKEPGESPIFWYAP 190
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
R + + +G +G+++RG++ GE+VA+KI + EK+ L+
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNT----VMLR 60
Query: 195 HLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H NI+ FI + +W ++T Y + GS+ +L Q + ++ L +A
Sbjct: 61 HENILGFIASDMTSRHSSTQLW-LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIAS 116
Query: 250 GMAYVHGLGF--------IHRDLKSDNLLISADKSIKIADFGVARIEVQTE-----GMTP 296
G+A++H F HRDLKS N+L+ + IAD G+A + Q+ G P
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 297 ETGTYRWMAP 306
GT R+MAP
Sbjct: 177 RVGTKRYMAP 186
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 63
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HR+L + N +++ D ++KI DFG+ R +
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 291 TE-------GMTPETGTYRWMAP 306
T+ G+ P RWMAP
Sbjct: 184 TDYYRKGGKGLLP----VRWMAP 202
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 3 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 56
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L + + R
Sbjct: 57 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 116
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 117 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 176 XKVKEPGESPIFWYAP 191
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G +VAIKI+++ + NP + L H NIV+
Sbjct: 29 KLARHILTGREVAIKIIDKTQLNP----TSLQKLFREVRIMKILNHPNIVKLFEVIETEK 84
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
++ EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 85 TLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 142
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 143 LLDADMNIKIADFGFS 158
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXX 178
DEW + K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLR 62
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQ 231
+ ++VR +G K +V E G ++ +L
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 232 NRAVP-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
R P L+ ++ A ++A GMAY++ F+HR+L + N +++ D ++KI DFG+ R +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 291 TE-------GMTPETGTYRWMAP 306
T+ G+ P RWMAP
Sbjct: 183 TDYYRKGGKGLLP----VRWMAP 201
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 5 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 58
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L + + R
Sbjct: 59 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 118
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 119 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 178 XKVKEPGESPIFWYAP 193
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 4 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 57
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L + + R
Sbjct: 58 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 117
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 118 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 177 XKVKEPGESPIFWYAP 192
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 28/188 (14%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FGK+ Y+ GE VA+K L + + P+
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQH----RSGWKQEID 85
Query: 189 XLATLKHLNIVRFIGACRKRMVWCI--VTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
L TL H +I+++ G C + V EY GS+R +L R L L +Q
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ--- 142
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPET 298
+ GMAY+H +IHRDL + N+L+ D+ +KI DFG+A+ V+ +G +P
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP-- 200
Query: 299 GTYRWMAP 306
W AP
Sbjct: 201 --VFWYAP 206
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +GF+HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG+AR+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G +VAIKI+++ + NP + L H NIV+
Sbjct: 32 KLARHILTGREVAIKIIDKTQLNP----TSLQKLFREVRIMKILNHPNIVKLFEVIETEK 87
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
++ EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 88 TLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 145
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 146 LLDADMNIKIADFGFS 161
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 139 MGTAFAQGAFGKLYRGTYN---GE--DVAIKILERPE--NNPEKAXXXXXXXXXXXXXLA 191
+ +G FG++Y G Y GE +VA+K ++ +N EK +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-------FMSEAVIMK 68
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L H +IV+ IG + W I+ E G + +L R +N L L V +L + + M
Sbjct: 69 NLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAM 126
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
AY+ + +HRD+ N+L+++ + +K+ DFG++R ++ E + T +WM+P
Sbjct: 127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSP 183
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 35/189 (18%)
Query: 143 FAQGAFGKLYRG-TYN---GED---VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
+GAFGK++ YN +D VA+K L+ +N K L L+H
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK------DFHREAELLTNLQH 74
Query: 196 LNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAV-------PLKLAVKQALDVA 248
+IV+F G C + +V EY K G + +FL AV P +L Q L +A
Sbjct: 75 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 249 R----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE-------GMTPE 297
+ GM Y+ F+HRDL + N L+ + +KI DFG++R T+ M P
Sbjct: 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP- 193
Query: 298 TGTYRWMAP 306
RWM P
Sbjct: 194 ---IRWMPP 199
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 139 MGTAFAQGAFGKLYRGTYN---GE--DVAIKILERPE--NNPEKAXXXXXXXXXXXXXLA 191
+ +G FG++Y G Y GE +VA+K ++ +N EK +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-------FMSEAVIMK 64
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L H +IV+ IG + W I+ E G + +L R +N L L V +L + + M
Sbjct: 65 NLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAM 122
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
AY+ + +HRD+ N+L+++ + +K+ DFG++R ++ E + T +WM+P
Sbjct: 123 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSP 179
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 112 QALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDV--AIKILERP 169
Q++ + + T L D W I +G GAFGK+Y+ V A K+++
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEI------IG-ELGDGAFGKVYKAQNKETSVLAAAKVIDT- 72
Query: 170 ENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTR 229
K+ LA+ H NIV+ + A I+ E+ GG+V +
Sbjct: 73 -----KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 230 --RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGV-AR 286
R +++ KQ LD + Y+H IHRDLK+ N+L + D IK+ADFGV A+
Sbjct: 128 LERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Query: 287 IEVQTEGMTPETGTYRWMAP 306
+ GT WMAP
Sbjct: 185 NTRXIQRRDSFIGTPYWMAP 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 139 MGTAFAQGAFGKLYRGTYN---GE--DVAIKILERPE--NNPEKAXXXXXXXXXXXXXLA 191
+ +G FG++Y G Y GE +VA+K ++ +N EK +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-------FMSEAVIMK 80
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L H +IV+ IG + W I+ E G + +L R +N L L V +L + + M
Sbjct: 81 NLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAM 138
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 306
AY+ + +HRD+ N+L+++ + +K+ DFG++R ++ E + T +WM+P
Sbjct: 139 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSP 195
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 1 AFEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 54
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ E+ GS+R++L + + R
Sbjct: 55 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI 114
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 115 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 174 XKVKEPGESPIFWYAP 189
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 146 GAFGKLYRG---TYNGED---VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
G FG++Y+G T +G+ VAIK L+ ++ + H NI+
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI-----MGQFSHHNII 109
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
R G K I+TEY + G++ +FL + L+L V +A GM Y+ + +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANMNY 168
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMAP 306
+HRDL + N+L++++ K++DFG++R+ E E +G RW AP
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 112 QALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDV--AIKILERP 169
Q++ + + T L D W I +G GAFGK+Y+ V A K+++
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEI------IG-ELGDGAFGKVYKAQNKETSVLAAAKVIDT- 72
Query: 170 ENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTR 229
K+ LA+ H NIV+ + A I+ E+ GG+V +
Sbjct: 73 -----KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 230 --RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGV-AR 286
R +++ KQ LD + Y+H IHRDLK+ N+L + D IK+ADFGV A+
Sbjct: 128 LERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Query: 287 IEVQTEGMTPETGTYRWMAP 306
+ GT WMAP
Sbjct: 185 NTRXIQRRDXFIGTPYWMAP 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 37/214 (17%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG---ED----VAIKILERPENN 172
PT+ L ++W L G GAFGK+ T G ED VA+K+L+ +
Sbjct: 32 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 173 PEKAXXXXXXXXXXXXXLATLKHL----NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT 228
EK L + HL NIV +GAC ++TEY G + FL
Sbjct: 91 DEK--------EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 229 RRQ------------NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKS 276
R+ N + + + + VA+GMA++ IHRD+ + N+L++
Sbjct: 143 RKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 202
Query: 277 IKIADFGVARIEVQTEGMTPETGTYR----WMAP 306
KI DFG+AR ++ + G R WMAP
Sbjct: 203 AKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 235
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 29/189 (15%)
Query: 136 KLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
++ + +G +G+++RG++ GE+VA+KI + EK+ L+H
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVKIFS---SRDEKSWFRETELYNT----VMLRH 61
Query: 196 LNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
NI+ FI + +W ++T Y + GS+ +L Q + ++ L +A G
Sbjct: 62 ENILGFIASDMTSRHSSTQLW-LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASG 117
Query: 251 MAYVHGLGF--------IHRDLKSDNLLISADKSIKIADFGVARIEVQTE-----GMTPE 297
+A++H F HRDLKS N+L+ + IAD G+A + Q+ G P
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 298 TGTYRWMAP 306
GT R+MAP
Sbjct: 178 VGTKRYMAP 186
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRG-TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
I R + + +GAFGK++ +N K+L + E + L
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---------VPLKLAV 241
L+H +IVRF G C + +V EY + G + +FL A P L +
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 242 KQAL----DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE----- 292
Q L VA GM Y+ GL F+HRDL + N L+ +KI DFG++R T+
Sbjct: 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 293 --GMTPETGTYRWMAP 306
M P RWM P
Sbjct: 218 GRTMLP----IRWMPP 229
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FGK+ Y+ GE VA+K L + + P+
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQH----RSGWKQEID 68
Query: 189 XLATLKHLNIVRFIGACRKR--MVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
L TL H +I+++ G C + +V EY GS+R +L R L L +Q
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ--- 125
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPET 298
+ GMAY+H +IHR+L + N+L+ D+ +KI DFG+A+ V+ +G +P
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 299 GTYRWMAP 306
W AP
Sbjct: 186 ----WYAP 189
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRG-TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
I R + + +GAFGK++ +N K+L + E + L
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---------VPLKLAV 241
L+H +IVRF G C + +V EY + G + +FL A P L +
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 242 KQAL----DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE----- 292
Q L VA GM Y+ GL F+HRDL + N L+ +KI DFG++R T+
Sbjct: 129 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 293 --GMTPETGTYRWMAP 306
M P RWM P
Sbjct: 189 GRTMLP----IRWMPP 200
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 156
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 306 P 306
P
Sbjct: 217 P 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FGK+ Y+ GE VA+K L + + P+
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQH----RSGWKQEID 68
Query: 189 XLATLKHLNIVRFIGACRKR--MVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
L TL H +I+++ G C + +V EY GS+R +L R L L +Q
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ--- 125
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPET 298
+ GMAY+H +IHR+L + N+L+ D+ +KI DFG+A+ V+ +G +P
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 299 GTYRWMAP 306
W AP
Sbjct: 186 ----WYAP 189
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG---ED----VAIKILERPENN 172
PT+ L ++W L G GAFGK+ T G ED VA+K+L+ +
Sbjct: 32 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 173 PEKAXXXXXXXXXXXXXLATLKHL----NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT 228
EK L + HL NIV +GAC ++TEY G + FL
Sbjct: 91 DEK--------EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL- 141
Query: 229 RRQNRAVPLKLAVKQA-------------LDVARGMAYVHGLGFIHRDLKSDNLLISADK 275
RR++R + A A VA+GMA++ IHRD+ + N+L++
Sbjct: 142 RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201
Query: 276 SIKIADFGVARIEVQTEGMTPETGTYR----WMAP 306
KI DFG+AR ++ + G R WMAP
Sbjct: 202 VAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRG-TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
I R + + +GAFGK++ +N K+L + E + L
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---------VPLKLAV 241
L+H +IVRF G C + +V EY + G + +FL A P L +
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 242 KQAL----DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE----- 292
Q L VA GM Y+ GL F+HRDL + N L+ +KI DFG++R T+
Sbjct: 135 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 293 --GMTPETGTYRWMAP 306
M P RWM P
Sbjct: 195 GRTMLP----IRWMPP 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXX 181
D + R L +G FG + Y+ GE VA+K L+
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLR 56
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM----T 295
++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 117 -LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 296 PETGTYRWMAP 306
P W AP
Sbjct: 176 PGESPIFWYAP 186
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 129
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 306 P 306
P
Sbjct: 190 P 190
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 146
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 306 P 306
P
Sbjct: 207 P 207
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXX 181
D + R L +G FG + Y+ GE VA+K L+
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLR 56
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---- 295
++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 117 -LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 296 PETGTYRWMAP 306
P W AP
Sbjct: 176 PGESPIFWYAP 186
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTEY + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG+ R+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FG + Y+ GE VA+K L+
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLRDFEREIE 81
Query: 189 XLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL ++
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQ 140
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT----PETGTYR 302
+ +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q + P
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 303 WMAP 306
W AP
Sbjct: 201 WYAP 204
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
E ++DL L + +G +G +Y+G+ + VA+K+ A
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFS-------FANRQNFINEKNIY 59
Query: 189 XLATLKHLNIVRFIGACRK-----RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ 243
+ ++H NI RFI + RM + +V EY GS+ ++L+ + V + +
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVS---SCRL 116
Query: 244 ALDVARGMAYVH---------GLGFIHRDLKSDNLLISADKSIKIADFGVA--------- 285
A V RG+AY+H HRDL S N+L+ D + I+DFG++
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 286 RIEVQTEGMTPETGTYRWMAP 306
R + E GT R+MAP
Sbjct: 177 RPGEEDNAAISEVGTIRYMAP 197
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXX 181
D + R L +G FG + Y+ GE VA+K L+
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLR 55
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL
Sbjct: 56 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 115
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---- 295
++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 116 -LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 296 PETGTYRWMAP 306
P W AP
Sbjct: 175 PGESPIFWYAP 185
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FG + Y+ GE VA+K L+
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLRDFEREIE 81
Query: 189 XLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL ++
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQ 140
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT----PETGTYR 302
+ +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q + P
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 303 WMAP 306
W AP
Sbjct: 201 WYAP 204
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXX 181
D + R L +G FG + Y+ GE VA+K L+
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLR 54
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL
Sbjct: 55 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 114
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---- 295
++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 115 -LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 296 PETGTYRWMAP 306
P W AP
Sbjct: 174 PGESPIFWYAP 184
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXX 181
D + R L +G FG + Y+ GE VA+K L+
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLR 56
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---- 295
++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 117 -LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 296 PETGTYRWMAP 306
P W AP
Sbjct: 176 PGESPIFWYAP 186
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G +VA+KI+++ + NP + L H NIV+
Sbjct: 32 KLARHVLTGREVAVKIIDKTQLNP----TSLQKLFREVRIMKILNHPNIVKLFEVIETEK 87
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 88 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENL 145
Query: 270 LISADKSIKIADFGVA 285
L+ D +IKIADFG +
Sbjct: 146 LLDGDMNIKIADFGFS 161
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRG-TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
I R + + +GAFGK++ YN K+L + + L
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRR----------QNRAVPLKLA 240
L+H +IV+F G C +V EY K G + +FL Q R +L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 241 VKQAL----DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE---- 292
+ Q L +A GM Y+ F+HRDL + N L+ A+ +KI DFG++R T+
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 293 ---GMTPETGTYRWMAP 306
M P RWM P
Sbjct: 192 GGHTMLP----IRWMPP 204
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKA 176
E+ D + R L +G FG + Y+ GE VA+K L+
Sbjct: 1 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------ST 54
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRA 234
L +L+H NIV++ G C R ++ EY GS+R +L R
Sbjct: 55 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI 114
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
+KL ++ + +GM Y+ +IHRDL + N+L+ + +KI DFG+ ++ Q +
Sbjct: 115 DHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 295 T----PETGTYRWMAP 306
P W AP
Sbjct: 174 XKVKEPGESPIFWYAP 189
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 93/223 (41%), Gaps = 46/223 (20%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG---ED----VAIKILERPENN 172
PT+ L ++W L G GAFGK+ T G ED VA+K+L+ +
Sbjct: 17 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 75
Query: 173 PEKAXXXXXXXXXXXXXLATLKHL----NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT 228
EK L + HL NIV +GAC ++TEY G + FL
Sbjct: 76 DEK--------EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 127
Query: 229 RRQNRAVPLKLAVKQ---ALD------------------VARGMAYVHGLGFIHRDLKSD 267
R+ + LA Q LD VA+GMA++ IHRD+ +
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 187
Query: 268 NLLISADKSIKIADFGVARIEVQTEGMTPETGTYR----WMAP 306
N+L++ KI DFG+AR ++ + G R WMAP
Sbjct: 188 NVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGT---YNGE----DVAIKILERPENNPEKAXXXXX 181
+W + L +G +G FGK+ + T G VA+K+L+ + E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-----LR 71
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ---------- 231
L + H ++++ GAC + ++ EYAK GS+R FL +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 232 ------------NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKI 279
RA+ + + A +++GM Y+ + +HRDL + N+L++ + +KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKI 191
Query: 280 ADFGVARIEVQTEGMTPETG---TYRWMA 305
+DFG++R + + + +WMA
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 146 GAFGKLYRGTYNGEDV--AIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
G FGK+Y+ V A K+++ K+ LA+ H NIV+ +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDT------KSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTR--RQNRAVPLKLAVKQALDVARGMAYVHGLGFIH 261
A I+ E+ GG+V + R +++ KQ LD + Y+H IH
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIH 131
Query: 262 RDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
RDLK+ N+L + D IK+ADFGV+ +T ++ GT WMAP
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 19/155 (12%)
Query: 142 AFAQGAFGKLYRGTYNGE------DVAIKILER---PENNPEKAXXXXXXXXXXXXXLAT 192
GAFG +Y+G + E VAIKIL P+ N E +A+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--------FMDEALIMAS 96
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMA 252
+ H ++VR +G C + +VT+ G + +++ ++ + +L + + +A+GM
Sbjct: 97 MDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMM 154
Query: 253 YVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
Y+ +HRDL + N+L+ + +KI DFG+AR+
Sbjct: 155 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 189
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG---ED----VAIKILERPENN 172
PT+ L ++W L G GAFGK+ T G ED VA+K+L+ +
Sbjct: 32 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 173 PEKAXXXXXXXXXXXXXLATLKHL----NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT 228
EK L + HL NIV +GAC ++TEY G + FL
Sbjct: 91 DEKEALMSE--------LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 229 RRQNRAVPL----------KLAVKQAL----DVARGMAYVHGLGFIHRDLKSDNLLISAD 274
R++ + +L+ + L VA+GMA++ IHRD+ + N+L++
Sbjct: 143 RKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 202
Query: 275 KSIKIADFGVARIEVQTEGMTPETGTYR----WMAP 306
KI DFG+AR ++ + G R WMAP
Sbjct: 203 HVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 19/155 (12%)
Query: 142 AFAQGAFGKLYRGTYNGE------DVAIKILER---PENNPEKAXXXXXXXXXXXXXLAT 192
GAFG +Y+G + E VAIKIL P+ N E +A+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--------FMDEALIMAS 73
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMA 252
+ H ++VR +G C + +VT+ G + +++ ++ + +L + + +A+GM
Sbjct: 74 MDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMM 131
Query: 253 YVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
Y+ +HRDL + N+L+ + +KI DFG+AR+
Sbjct: 132 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA+KI+++ + N + L H NIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G + + IVTEY + GS+ FL + ++L V V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VGMLRGVGA 162
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ LG++HRDL + N+L+ ++ K++DFG++R+ E + TG RW A
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTA 222
Query: 306 P 306
P
Sbjct: 223 P 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA+KI+++ + N + L H NIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGT---YNGE----DVAIKILERPENNPEKAXXXXX 181
+W + L +G +G FGK+ + T G VA+K+L+ + E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-----LR 71
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ---------- 231
L + H ++++ GAC + ++ EYAK GS+R FL +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 232 ------------NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKI 279
RA+ + + A +++GM Y+ + +HRDL + N+L++ + +KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 280 ADFGVARIEVQTEGMTPETG---TYRWMA 305
+DFG++R + + + +WMA
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGT---YNGE----DVAIKILERPENNPEKAXXXXX 181
+W + L +G +G FGK+ + T G VA+K+L+ + E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-----LR 71
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ---------- 231
L + H ++++ GAC + ++ EYAK GS+R FL +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 232 ------------NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKI 279
RA+ + + A +++GM Y+ + +HRDL + N+L++ + +KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 280 ADFGVARIEVQTEGMTPETG---TYRWMA 305
+DFG++R + + + +WMA
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMA 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA+KI+++ + N + L H NIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA+KI+++ + N + L H NIV+
Sbjct: 24 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 79
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 80 TLYLVMEYASGGEVFDYLV--AHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 137
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 138 LLDADMNIKIADFGFS 153
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 121 TEGLEN-YDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-VAIKILERPENNPEKAXX 178
+E L+N ++ ID L +G +G FG + G ED ++K+ + +
Sbjct: 19 SEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR 78
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGAC--------RKRMVWCIVTEYAKGGSVRQFL--T 228
+ H N++R +G C K MV + + K G + +L +
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV---ILPFMKYGDLHTYLLYS 135
Query: 229 RRQN--RAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
R + + +PL+ +K +D+A GM Y+ F+HRDL + N ++ D ++ +ADFG+++
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 146 GAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
GA+G +Y R ++G VA+K + P N E L +H N+VR +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 204 AC-----RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
C + + +V E+ +R +L + +P + RG+ ++H
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+++ ++K+ADFG+ARI + P T + AP
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAP 180
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 146 GAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
GA+G +Y R ++G VA+K + P N E L +H N+VR +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 204 AC-----RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
C + + +V E+ +R +L + +P + RG+ ++H
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+++ ++K+ADFG+ARI + P T + AP
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G + + IVTEY + GS+ FL + ++L V V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VGMLRGVGA 162
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ LG++HRDL + N+L+ ++ K++DFG++R+ E + TG RW A
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 306 P 306
P
Sbjct: 223 P 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 128 DEWTIDLRKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXX 181
D + R L +G FG + Y+ GE VA+K L+
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH------STEEHLR 57
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
L +L+H NIV++ G C R ++ EY GS+R +L + + R +KL
Sbjct: 58 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 117
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM----T 295
++ + +GM Y+ +IHR+L + N+L+ + +KI DFG+ ++ Q +
Sbjct: 118 -LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 296 PETGTYRWMAP 306
P W AP
Sbjct: 177 PGESPIFWYAP 187
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 18/198 (9%)
Query: 120 PTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPE 174
P E + + + ID+ + + G FG++ RG VAIK L+ +
Sbjct: 2 PNEAVREFAK-EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 175 KAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA 234
+ + +H NI+R G M I+TE+ + G++ FL +
Sbjct: 61 R-----REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF 115
Query: 235 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGM 294
++L V +A GM Y+ + ++HRDL + N+L++++ K++DFG++R +
Sbjct: 116 TVIQL-VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 295 TPETGTY------RWMAP 306
ET + RW AP
Sbjct: 175 PTETSSLGGKIPIRWTAP 192
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+ G K IVTEY + GS+ FL + + ++L V ++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL-VGMLRGISA 135
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW A
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 195
Query: 306 P 306
P
Sbjct: 196 P 196
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 29/187 (15%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTY--NGED----VAIKILERPENNPEKAXXXXXXXXXX 186
+LRKL + G FG +++G + GE V IK++E +
Sbjct: 32 ELRKLKV---LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-----KSGRQSFQAVTDH 83
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQAL 245
+ +L H +IVR +G C + +VT+Y GS+ + RQ+R A+ +L + +
Sbjct: 84 MLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGV 140
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-------EVQTEGMTPET 298
+A+GM Y+ G +HR+L + N+L+ + +++ADFGVA + + +E TP
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP-- 198
Query: 299 GTYRWMA 305
+WMA
Sbjct: 199 --IKWMA 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 146 GAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
GA+G +Y R ++G VA+K + P N E L +H N+VR +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 204 AC-----RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
C + + +V E+ +R +L + +P + RG+ ++H
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+++ ++K+ADFG+ARI + P T + AP
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAP 180
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA++I+++ + N + L H NIV+
Sbjct: 31 KLARHILTGKEVAVRIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA++I+++ + N + L H NIV+
Sbjct: 31 KLARHILTGKEVAVRIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
+V EYA GG V +L + + K A + + + Y H +HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 270 LISADKSIKIADFGVA 285
L+ AD +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 29/187 (15%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTY--NGED----VAIKILERPENNPEKAXXXXXXXXXX 186
+LRKL + G FG +++G + GE V IK++E +
Sbjct: 14 ELRKLKV---LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-----KSGRQSFQAVTDH 65
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQAL 245
+ +L H +IVR +G C + +VT+Y GS+ + RQ+R A+ +L + +
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGV 122
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-------EVQTEGMTPET 298
+A+GM Y+ G +HR+L + N+L+ + +++ADFGVA + + +E TP
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP-- 180
Query: 299 GTYRWMA 305
+WMA
Sbjct: 181 --IKWMA 185
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTE + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 150 KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
KL R G++VA+KI+++ + N L H NIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIXKVLNHPNIVKLFEVIETEK 86
Query: 210 VWCIVTEYAKGGSVRQFLT---RRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+V EYA GG V +L R + + K + + Y H +HRDLK+
Sbjct: 87 TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQKFIVHRDLKA 141
Query: 267 DNLLISADKSIKIADFGVA 285
+NLL+ AD +IKIADFG +
Sbjct: 142 ENLLLDADXNIKIADFGFS 160
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FGK+ Y+ GE VA+K L + P+
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQ----LRSGWQREIE 63
Query: 189 XLATLKHLNIVRFIGACR---KRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
L TL H +IV++ G C ++ V +V EY GS+R +L R L L +Q
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQ-LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-- 120
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ GMAY+H +IHR L + N+L+ D+ +KI DFG+A+
Sbjct: 121 -ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 85
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 144
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 145 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ----------- 243
H NI+ +GAC R + EYA G++ FL + + A+
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 244 ---ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEV---QTEGMTP 296
A DVARGM Y+ FIHRDL + N+L+ + KIADFG++R EV +T G P
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 297 ETGTYRWMA 305
RWMA
Sbjct: 195 ----VRWMA 199
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYN------GEDVAIKILERPENNPEKAXXXXXXXXXXXX 188
R L +G FGK+ Y+ GE VA+K L + P+
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQ----LRSGWQREIE 62
Query: 189 XLATLKHLNIVRFIGACR---KRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
L TL H +IV++ G C ++ V +V EY GS+R +L R L L +Q
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQ-LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-- 119
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ GMAY+H +IHR L + N+L+ D+ +KI DFG+A+
Sbjct: 120 -ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ----------- 243
H NI+ +GAC R + EYA G++ FL + + A+
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 244 ---ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEV---QTEGMTP 296
A DVARGM Y+ FIHRDL + N+L+ + KIADFG++R EV +T G P
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 297 ETGTYRWMA 305
RWMA
Sbjct: 205 ----VRWMA 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTE + GS+ FL + + ++L V +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 129
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 306 P 306
P
Sbjct: 190 P 190
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 132 IDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXX 186
+D+ +G +G +Y R GE VA+K + E P A
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL---- 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
L L H NIV+ + +V E+ +++F+ +PL L
Sbjct: 60 ---LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMA 305
+ +G+A+ H +HRDLK NLLI+ + +IK+ADFG+AR V T E T + A
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 306 P 306
P
Sbjct: 176 P 176
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 34/202 (16%)
Query: 99 GKVTHALNDDALAQALM----DHRYPTEGLE----NYDEWTIDLRKLNMGTAFAQGAFGK 150
K T+++ND AL+ + + +R P LE N+D K +G G FGK
Sbjct: 6 SKATNSIND-ALSSSYLVPFESYRVPLVDLEEATNNFD------HKFLIG----HGVFGK 54
Query: 151 LYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
+Y+G +G VA+K PE + L+ +H ++V IG C +R
Sbjct: 55 VYKGVLRDGAKVALK-----RRTPESSQGIEEFETEIET-LSFCRHPHLVSLIGFCDERN 108
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDV----ARGMAYVHGLGFIHRDL 264
++ +Y + G++++ L +P + ++ +Q L++ ARG+ Y+H IHRD+
Sbjct: 109 EMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDV 165
Query: 265 KSDNLLISADKSIKIADFGVAR 286
KS N+L+ + KI DFG+++
Sbjct: 166 KSINILLDENFVPKITDFGISK 187
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 87
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 146
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR ++ + + + +TG +WMA
Sbjct: 147 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 145
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 146 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 50 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 104
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 105 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 163
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 164 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 145
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 146 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 34/202 (16%)
Query: 99 GKVTHALNDDALAQALM----DHRYPTEGLE----NYDEWTIDLRKLNMGTAFAQGAFGK 150
K T+++ND AL+ + + +R P LE N+D K +G G FGK
Sbjct: 6 SKATNSIND-ALSSSYLVPFESYRVPLVDLEEATNNFD------HKFLIG----HGVFGK 54
Query: 151 LYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRM 209
+Y+G +G VA+K PE + L+ +H ++V IG C +R
Sbjct: 55 VYKGVLRDGAKVALK-----RRTPESSQGIEEFETEIET-LSFCRHPHLVSLIGFCDERN 108
Query: 210 VWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDV----ARGMAYVHGLGFIHRDL 264
++ +Y + G++++ L +P + ++ +Q L++ ARG+ Y+H IHRD+
Sbjct: 109 EMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDV 165
Query: 265 KSDNLLISADKSIKIADFGVAR 286
KS N+L+ + KI DFG+++
Sbjct: 166 KSINILLDENFVPKITDFGISK 187
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 81
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 82 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 140
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 141 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
N+DE I + MG +G FG +Y+G N VA+K L + +
Sbjct: 26 NFDERPISVGGNKMG----EGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 81
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK--LAVKQ 243
+A +H N+V +G C+V Y GS+ L+ PL + K
Sbjct: 82 KV--MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKI 138
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIE---VQTEGMTPETGT 300
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR QT + GT
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 301 YRWMAP 306
+MAP
Sbjct: 199 TAYMAP 204
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 84
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 143
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 144 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 85
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 144
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 145 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 51 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 105
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 106 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 164
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 165 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 78
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 79 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 137
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 138 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 83
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 84 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 142
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMA 305
M Y+ F+HRDL + N ++ ++K+ADFG+AR E + T +WMA
Sbjct: 143 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 39/195 (20%)
Query: 145 QGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
+GAFG++++ G VA+K+L+ E + +A + N
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-----EASADMQADFQREAALMAEFDNPN 111
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFL-----------------TR-RQNRAVPLKL 239
IV+ +G C C++ EY G + +FL TR R + P L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 240 AVKQALDVAR----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT 295
+ + L +AR GMAY+ F+HRDL + N L+ + +KIADFG++R + +
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR-NIYSADYY 230
Query: 296 PETGT----YRWMAP 306
G RWM P
Sbjct: 231 KADGNDAIPIRWMPP 245
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 12/186 (6%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
N+DE I + MG +G FG +Y+G N VA+K L + +
Sbjct: 26 NFDERPISVGGNKMG----EGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 81
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK--LAVKQ 243
+A +H N+V +G C+V Y GS+ L+ PL + K
Sbjct: 82 KV--MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKI 138
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIE---VQTEGMTPETGT 300
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR QT GT
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 301 YRWMAP 306
+MAP
Sbjct: 199 TAYMAP 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 85
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ L H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 99
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ L H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGED---------VAIKILERPENNPEKAXXXXXX 182
+ K+ + QG+FG +Y G N D VA+K + N +
Sbjct: 13 VSREKITLLRELGQGSFGMVYEG--NARDIIKGEAETRVAVKTV-----NESASLRERIE 65
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL-------TRRQNRAV 235
+ ++VR +G K +V E G ++ +L R
Sbjct: 66 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 125
Query: 236 P-LKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE-- 292
P L+ ++ A ++A GMAY++ F+HRDL + N +++ D ++KI DFG+ R +T+
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 293 -----GMTPETGTYRWMAP 306
G+ P RWMAP
Sbjct: 186 RKGGKGLLP----VRWMAP 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE A L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------AML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 87
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 146
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR + + + + +TG +WMA
Sbjct: 147 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 91
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 92 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 150
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR + + + + +TG +WMA
Sbjct: 151 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 146 GAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXX--LATLKHLNIVRF 201
GA+G +Y R ++G VA+K + P L +H N+VR
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL 79
Query: 202 IGAC-----RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
+ C + + +V E+ +R +L + +P + RG+ ++H
Sbjct: 80 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+++ ++K+ADFG+ARI +TP T + AP
Sbjct: 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 145
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR + + + + +TG +WMA
Sbjct: 146 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 146 GAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGAC 205
G FG++++ + D +++R + N EKA LA L H+NIV + G
Sbjct: 22 GGFGQVFKAKHRI-DGKTYVIKRVKYNNEKAEREVKA-------LAKLDHVNIVHYNGCW 73
Query: 206 ----------------RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
K I E+ G++ Q++ +R+ + LA++ + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET-GTYRWMAP 306
G+ Y+H I+RDLK N+ + K +KI DFG+ ++ +G + GT R+M+P
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSKGTLRYMSP 190
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 432
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 433 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 541
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 145
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 204
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR + + + + +TG +WMA
Sbjct: 205 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 145
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR + + + + +TG +WMA
Sbjct: 146 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 433
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 434 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 542
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 137 LNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
++ +G FG +Y GT D A+K L R + E + +
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 84
Query: 192 TLKHLNIVRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H N++ +G C R +V Y K G +R F+ R + +K + L VA+G
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKG 143
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR--IEVQTEGMTPETGT---YRWMA 305
M ++ F+HRDL + N ++ ++K+ADFG+AR + + + + +TG +WMA
Sbjct: 144 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 88
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 89 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 145
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 197
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 66
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 90
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 91 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 90
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 91 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 199
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 68
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 69 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 125
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 177
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
ID ++LN T + G+L++G + G D+ +K+L+ + + K+ L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPR----LR 62
Query: 192 TLKHLNIVRFIGACRKRMVW--CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H N++ +GAC+ ++T + GS+ L N V AVK ALD+AR
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 250 GMAYVHGL-GFIHRD-LKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
GMA++H L I R L S +++I D + +I+ V + Q+ G W+AP
Sbjct: 123 GMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPG---RMYAPAWVAP 177
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 80
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 81 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 189
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 143 FAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
GAFGK+Y+ G A K++E K+ LAT H IV+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIET------KSEEELEDYIVEIEILATCDHPYIVK 72
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTR--RQNRAVPLKLAVKQALDVARGMAYVHGLG 258
+GA I+ E+ GG+V + R +++ +Q L+ + ++H
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE---ALNFLHSKR 129
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 306
IHRDLK+ N+L++ + I++ADFGV+ ++T + GT WMAP
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 20 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 72
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+R G K IVTE + GS+ FL + + ++L V +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIAS 158
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ +G +HRDL + N+LI+++ K++DFG++R+ E E G RW +
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 143 FAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
GAFGK+Y+ G A K++E K+ LAT H IV+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIET------KSEEELEDYIVEIEILATCDHPYIVK 80
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTR--RQNRAVPLKLAVKQALDVARGMAYVHGLG 258
+GA I+ E+ GG+V + R +++ +Q L+ + ++H
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE---ALNFLHSKR 137
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 306
IHRDLK+ N+L++ + I++ADFGV+ ++T + GT WMAP
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 125
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQTEGMTPETG 299
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR ++ G + G
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-DIYRAGYYRKGG 244
Query: 300 T----YRWMAP 306
+WM P
Sbjct: 245 CAMLPVKWMPP 255
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 70
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 71 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 179
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 74
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 75 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP----VKWYAP 183
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 20 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 72
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 145 QGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G+FG++Y+G N E VAIKI++ E+A L+ I R+
Sbjct: 29 KGSFGEVYKGIDNHTKEVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL--DVARGMAYVHGLGFI 260
G+ K I+ EY GGS L + PL+ + ++ +G+ Y+H I
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSERKI 138
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 306
HRD+K+ N+L+S +K+ADFGVA T+ GT WMAP
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ----------- 243
H NI+ +GAC R + EYA G++ FL + + A+
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 244 ---ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEV---QTEGMTP 296
A DVARGM Y+ FIHR+L + N+L+ + KIADFG++R EV +T G P
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 297 ETGTYRWMA 305
RWMA
Sbjct: 202 ----VRWMA 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 143 FAQGAFGKLYRGTYN----GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G FG + +G Y + VA+KIL+ N+P + L + I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAEANVMQQLDNPYI 74
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
VR IG C W +V E A+ G + ++L +QNR V K ++ V+ GM Y+
Sbjct: 75 VRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
F+HRDL + N+L+ KI+DFG+++ + QT G P +W AP
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP----VKWYAP 183
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 64
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 64
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 113 ALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPE 170
++MDH + T G+ I + +G+FG+ L + G++ A+K++ + +
Sbjct: 4 SMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 63
Query: 171 NNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTR 229
K L L H NI++ + + +V E GG + + ++R
Sbjct: 64 V---KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 120
Query: 230 RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVAR 286
++ V ++Q L G+ Y+H +HRDLK +NLL+ S D +I+I DFG++
Sbjct: 121 KRFSEVDAARIIRQVL---SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 287 IEVQTEGMTPETGTYRWMAP 306
++ M + GT ++AP
Sbjct: 178 HFEASKKMKDKIGTAYYIAP 197
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 102
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQTEGMTPETG 299
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR ++ G + G
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-DIYRAGYYRKGG 221
Query: 300 T----YRWMAP 306
+WM P
Sbjct: 222 CAMLPVKWMPP 232
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 143 FAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+G FGK+Y+G +G VA+K L+ E+ ++ H N++R
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKE-----ERXQGGELQFQTEVEMISMAVHRNLLRL 100
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--ALDVARGMAYVHG--- 256
G C +V Y GSV L R PL +Q AL ARG+AY+H
Sbjct: 101 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 160
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARI 287
IHRD+K+ N+L+ + + DFG+A++
Sbjct: 161 PKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 46/213 (21%)
Query: 129 EWTIDLRKLNMGTAFAQ------GAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
++T+D R G F + G FG++++ + D ++ R + N EKA
Sbjct: 3 KYTVDKR---FGMDFKEIELIGSGGFGQVFKAKHRI-DGKTYVIRRVKYNNEKAEREVKA 58
Query: 183 XXXXXXXLATLKHLNIVRFIGAC-----------------------------RKRMVWCI 213
LA L H+NIV + G K I
Sbjct: 59 -------LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFI 111
Query: 214 VTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISA 273
E+ G++ Q++ +R+ + LA++ + +G+ Y+H IHRDLK N+ +
Sbjct: 112 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 171
Query: 274 DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
K +KI DFG+ T GT R+M+P
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSP 204
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 143 FAQGAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+G FGK+Y+G +G VA+K L+ E+ ++ H N++R
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKE-----ERTQGGELQFQTEVEMISMAVHRNLLRL 92
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--ALDVARGMAYVHG--- 256
G C +V Y GSV L R PL +Q AL ARG+AY+H
Sbjct: 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARI 287
IHRD+K+ N+L+ + + DFG+A++
Sbjct: 153 PKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 66
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 67 KLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK +NLLI+ + +IK+ADFG+AR
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 68
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK +NLLI+ + +IK+ADFG+AR
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVA---IKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA I++ E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVA---IKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA I++ E P A L L H NIV
Sbjct: 12 EGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 64
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 38/213 (17%)
Query: 127 YD-EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAXX 178
YD +W L G GAFGK+ T G VA+K+L+ ++ E+
Sbjct: 36 YDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL 95
Query: 179 XXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK 238
H NIV +GAC ++ EY G + +L ++ + +
Sbjct: 96 MSELKMMTQLG----SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 239 LAVKQ---------------------ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSI 277
+ + A VA+GM ++ +HRDL + N+L++ K +
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVV 211
Query: 278 KIADFGVARIEVQTEGMTPETGTYR----WMAP 306
KI DFG+AR ++ ++ G R WMAP
Sbjct: 212 KICDFGLAR-DIMSDSNYVVRGNARLPVKWMAP 243
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 67
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK +NLLI+ + +IK+ADFG+AR
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 210 VWCIVTEYAKGGSVRQFLTR-RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDN 268
+W +V E+ +GG++ +T R N + L V R ++Y+H G IHRD+KSD+
Sbjct: 117 LW-VVMEFLEGGALTDIVTHTRMNE----EQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 269 LLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
+L+++D IK++DFG A++ + GT WMAP
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAP 210
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 66
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK +NLLI+ + +IK+ADFG+AR
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+ G K I+TEY + GS+ FL + R ++L V +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGS 121
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ + ++HRDL + N+L++++ K++DFG++R+ E E G RW A
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 306 P 306
P
Sbjct: 182 P 182
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 85
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+ G K I+TEY + GS+ FL + R ++L V +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGS 127
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ + ++HRDL + N+L++++ K++DFG++R+ E E G RW A
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 306 P 306
P
Sbjct: 188 P 188
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 101
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 162 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 111
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 99
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H N+V G + IV E+ + G++ FL + + ++L V +A
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-VGMLRGIAA 156
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETG---TYRWMA 305
GM Y+ +G++HRDL + N+L++++ K++DFG++R IE E + TG RW A
Sbjct: 157 GMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTA 216
Query: 306 P 306
P
Sbjct: 217 P 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 64
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 141 TAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
+G +G +Y G V I I E PE + + LKH NIV+
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH----LKHKNIVQ 69
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRR----QNRAVPLKLAVKQALDVARGMAYVHG 256
++G+ + I E GGS+ L + ++ + KQ L+ G+ Y+H
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE---GLKYLHD 126
Query: 257 LGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPE----TGTYRWMAP 306
+HRD+K DN+LI+ + KI+DFG ++ + G+ P TGT ++MAP
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAP 178
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 84
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 91
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 152 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 141 TAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
+G +G +Y G V I I E PE + + LKH NIV+
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH----LKHKNIVQ 83
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRR----QNRAVPLKLAVKQALDVARGMAYVHG 256
++G+ + I E GGS+ L + ++ + KQ L+ G+ Y+H
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE---GLKYLHD 140
Query: 257 LGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPE----TGTYRWMAP 306
+HRD+K DN+LI+ + KI+DFG ++ + G+ P TGT ++MAP
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAP 192
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 76
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 84
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVYSEQ---DELDFLMEA 99
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+AR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+++ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +IK+ADFG+AR V T E T + AP
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXXXXXXXXX 186
ID+ + + G FG++ RG VAIK L+ ++
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-----REFLSE 65
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ +H NI+R G M I+TE+ + G++ FL + ++L V
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-VGMLRG 124
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY----- 301
+A GM Y+ + ++HRDL + N+L++++ K++DFG++R + T +
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 302 -RWMAP 306
RW AP
Sbjct: 185 IRWTAP 190
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 12/186 (6%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
N+DE I + MG +G FG +Y+G N VA+K L + +
Sbjct: 20 NFDERPISVGGNKMG----EGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 75
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK--LAVKQ 243
+A +H N+V +G C+V Y GS+ L+ PL + K
Sbjct: 76 KV--MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKI 132
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIE---VQTEGMTPETGT 300
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR Q GT
Sbjct: 133 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGT 192
Query: 301 YRWMAP 306
+MAP
Sbjct: 193 TAYMAP 198
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK +NLLI+ + +IK+ADFG+AR
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 66
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 64
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 68
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 68
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 67
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 17 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 69
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 60
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 67
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 66
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 64
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 65
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKIL--------ERPENNPEKAXXXXXXXXXXXXXLATLK 194
+G+FGK L + T +G IK + ER E+ E A LA +K
Sbjct: 34 EGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAV------------LANMK 81
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD----VARG 250
H NIV++ + + IV +Y +GG L +R N + Q LD +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGD----LFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 306
+ +VH +HRD+KS N+ ++ D ++++ DFG+AR+ T E GT +++P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 68
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 143 FAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
QGA G +Y G++VAI+ + + P+K K+ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN-----KNPNIVN 81
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
++ + +V EY GGS+ +T + ++ L + + ++H I
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVI 138
Query: 261 HRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
HRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 143 FAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
QGA G +Y G++VAI+ + + P+K K+ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN-----KNPNIVN 81
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
++ + +V EY GGS+ +T + ++ L + + ++H I
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVI 138
Query: 261 HRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
HRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXIN-------KML 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 68
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 67
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 68 KLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILE--RPENNPEKAXXXXXXXXXXXXXLATL 193
++ +GA+G +L E VA+KI++ R + PE L
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-------KML 61
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
H N+V+F G R+ + + EY GG + F + +P A + + G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 254 VHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 145 QGAFGKLYRG---TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+GA+GK+++ G VA+K + R + E L T +H N+VR
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 202 IGACR-----KRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
C + +V E+ + +L + VP + + RG+ ++H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK N+L+++ IK+ADFG+ARI +T T + AP
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 143 FAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
QGA G +Y G++VAI+ + + P+K K+ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN-----KNPNIVN 82
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
++ + +V EY GGS+ +T + ++ L + + ++H I
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVI 139
Query: 261 HRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
HRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 143 FAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
QGA G +Y G++VAI+ + + P+K K+ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN-----KNPNIVN 81
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
++ + +V EY GGS+ +T + ++ L + + ++H I
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVI 138
Query: 261 HRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
HRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILE---RPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G +G +Y R GE VA+K + E P A L L H NIV
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNHPNIV 68
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ + +IK+ADFG+AR
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 145 QGAFGKLYRG---TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+GA+GK+++ G VA+K + R + E L T +H N+VR
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 202 IGACR-----KRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
C + +V E+ + +L + VP + + RG+ ++H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK N+L+++ IK+ADFG+ARI +T T + AP
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 145 QGAFGKLYRG---TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+GA+GK+++ G VA+K + R + E L T +H N+VR
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 202 IGACR-----KRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
C + +V E+ + +L + VP + + RG+ ++H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK N+L+++ IK+ADFG+ARI +T T + AP
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 133 DLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
DLR++ G+FG +Y R N E VAIK + + +++ L
Sbjct: 58 DLREI------GHGSFGAVYFARDVRNSEVVAIKKMSY---SGKQSNEKWQDIIKEVRFL 108
Query: 191 ATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSVRQF-LTRRQNRAVPLKLAVKQALDVA 248
L+H N +++ G R+ W +V EY G + + ++ + V + AL
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAW-LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL--- 164
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---TGTYRWMA 305
+G+AY+H IHRD+K+ N+L+S +K+ DFG A I M P GT WMA
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMA 218
Query: 306 P 306
P
Sbjct: 219 P 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTY--NGEDV----AIKILERPENNPEKAXXXXXXXXXX 186
+LRK+ + GAFG +Y+G + +GE+V AIK+L EN KA
Sbjct: 18 ELRKVKV---LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR--ENTSPKANKEILDEAYV 72
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+A + + R +G C V +VT+ G + + + R L + +
Sbjct: 73 ---MAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDL-LNWCMQ 127
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
+A+GM+Y+ + +HRDL + N+L+ + +KI DFG+AR+
Sbjct: 128 IAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGE-------DVAIKILERPENNPEKAXXXXXXXXXXX 187
+ + + GAFG++Y G +G VA+K L PE E+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 85
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNR-AVPLKLAVKQALD 246
++ H NIVR IG + + I+ E GG ++ FL + R + P LA+ L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 247 VAR----GMAYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVAR 286
VAR G Y+ FIHRD+ + N L++ + KI DFG+A+
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H N++ G K I+TE+ + GS+ FL + + ++L V +A
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VGMLRGIAA 146
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETG-----TYRW 303
GM Y+ + ++HRDL + N+L++++ K++DFG++R +E T T + RW
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 206
Query: 304 MAP 306
AP
Sbjct: 207 TAP 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 146 GAFGKLYRGTYNGE----DVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
G FG + +G Y DVAIK+L++ EKA + L + IVR
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEEMMREAQI--MHQLDNPYIVRL 75
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIH 261
IG C+ + +V E A GG + +FL ++ +P+ + V+ GM Y+ F+H
Sbjct: 76 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 262 RDLKSDNLLISADKSIKIADFGVAR 286
RDL + N+L+ KI+DFG+++
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSK 158
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 145 QGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G++G ++ R G+ VAIK E++P L LKH N+V +
Sbjct: 13 EGSYGVVFKCRNRDTGQIVAIKKFLESEDDP----VIKKIALREIRMLKQLKHPNLVNLL 68
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHR 262
R++ +V EY + + R R VP L + + + H IHR
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 263 DLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRW 303
D+K +N+LI+ IK+ DFG AR+ + RW
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW 167
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H NI+ G K I+TEY + GS+ FL + R ++L V +
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGS 142
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 305
GM Y+ + +HRDL + N+L++++ K++DFG++R+ E E G RW A
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 133 DLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
DLR++ G+FG +Y R N E VAIK + + +++ L
Sbjct: 19 DLREI------GHGSFGAVYFARDVRNSEVVAIKKMSY---SGKQSNEKWQDIIKEVRFL 69
Query: 191 ATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSVRQF-LTRRQNRAVPLKLAVKQALDVA 248
L+H N +++ G R+ W +V EY G + + ++ + V + AL
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAW-LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL--- 125
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---TGTYRWMA 305
+G+AY+H IHRD+K+ N+L+S +K+ DFG A I M P GT WMA
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMA 179
Query: 306 P 306
P
Sbjct: 180 P 180
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 139 MGTAFAQGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
+G G FGK+ G + G VA+KIL R + ++ L +H
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI---RSLDVVGKIRREIQNLKLFRHP 76
Query: 197 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
+I++ +V EY GG + ++ + N + K + + + G+ Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHR 134
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+ A + KIADFG++ + E + G+ + AP
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 134 LRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL- 190
+ +G +G+F +YR + G +VAIK++++ KA +
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK------KAMYKAGMVQRVQNEVK 63
Query: 191 --ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL--D 246
LKH +I+ +V E G + ++L +NR P +
Sbjct: 64 IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQ 120
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMA 305
+ GM Y+H G +HRDL NLL++ + +IKIADFG+A ++++ E GT +++
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYIS 180
Query: 306 P 306
P
Sbjct: 181 P 181
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
G +G++Y+G + G+ AIK+++ + E+ H NI + G
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS------HHRNIATYYG 88
Query: 204 ACRKR-------MVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
A K+ +W +V E+ GSV + + + + ++ RG++++H
Sbjct: 89 AFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 306
IHRD+K N+L++ + +K+ DFGV A+++ GT WMAP
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXX 185
DLR L G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 19 DLRLLE---KLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIR 70
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +L H N++R G + +VTE A GS+ L + Q + L + A+
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 128
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
VA GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
ID ++LN T + G+L++G + G D+ +K+L+ + + K+ L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS----RDFNEECPRLR 62
Query: 192 TLKHLNIVRFIGACRKRMV--WCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
H N++ +GAC+ ++T + GS+ L N V AVK ALD AR
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXAR 122
Query: 250 GMAYVHGL-GFIHRD-LKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G A++H L I R L S ++ I D + +I+ V + Q+ G W+AP
Sbjct: 123 GXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADV-KFSFQSPGRXYAPA---WVAP 177
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXX 185
DLR L G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 19 DLRLLE---KLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIR 70
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +L H N++R G + +VTE A GS+ L + Q + L + A+
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 128
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
VA GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMA 252
L H N+V+F G R+ + + EY GG + F + +P A + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 253 YVHGLGFIHRDLKSDNLLISADKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 306
Y+HG+G HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 29/181 (16%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
A+G FG +++ E VA+KI + + L +KH NI++FIG
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQ-------NEYEVYSLPGMKHENILQFIG 85
Query: 204 ACRKRM-----VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH--- 255
A ++ +W ++T + + GS+ FL + V A +ARG+AY+H
Sbjct: 86 AEKRGTSVDVDLW-LITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 256 -GL------GFIHRDLKSDNLLISADKSIKIADFGVA-RIEV-QTEGMTP-ETGTYRWMA 305
GL HRD+KS N+L+ + + IADFG+A + E ++ G T + GT R+MA
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 306 P 306
P
Sbjct: 202 P 202
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXX 185
DLR L G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 13 DLRLLE---KLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIR 64
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +L H N++R G + +VTE A GS+ L + Q + L + A+
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 122
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
VA GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXXXX 187
+ L + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 62
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ +L H N++R G + +VTE A GS+ L + Q + L + A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 120
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
A GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXXXX 187
+ L + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 62
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ +L H N++R G + +VTE A GS+ L + Q + L + A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 120
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
A GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXX 185
DLR L G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 13 DLRLLE---KLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIR 64
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ +L H N++R G + +VTE A GS+ L + Q + L + A+
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAV 122
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
VA GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPE--NNPEKAXXXXXXXXXXX 187
+ L + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 62
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
+ +L H N++R G + +VTE A GS+ L + Q + L + A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 120
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTE 292
A GM Y+ FIHRDL + NLL++ +KI DFG+ R Q +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVAR 249
+ L H NIV I + + +V EY +G ++ +++ +V + Q LD
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD--- 122
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---GTYRWMAP 306
G+ + H + +HRD+K N+LI ++K++KI DFG+A+ +T +T GT ++ +P
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSP 181
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 116 DHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNP 173
DH + T G+ I + +G+FG+ L + G++ A+K++ + +
Sbjct: 30 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-- 87
Query: 174 EKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQN 232
K L L H NI++ + + +V E GG + + ++R++
Sbjct: 88 -KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 146
Query: 233 RAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVARIEV 289
V ++Q L G+ Y+H +HRDLK +NLL+ S D +I+I DFG++
Sbjct: 147 SEVDAARIIRQVL---SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Query: 290 QTEGMTPETGTYRWMAP 306
++ M + GT ++AP
Sbjct: 204 ASKKMKDKIGTAYYIAP 220
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 116 DHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNP 173
DH + T G+ I + +G+FG+ L + G++ A+K++ + +
Sbjct: 31 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-- 88
Query: 174 EKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQN 232
K L L H NI++ + + +V E GG + + ++R++
Sbjct: 89 -KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 147
Query: 233 RAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVARIEV 289
V ++Q L G+ Y+H +HRDLK +NLL+ S D +I+I DFG++
Sbjct: 148 SEVDAARIIRQVL---SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Query: 290 QTEGMTPETGTYRWMAP 306
++ M + GT ++AP
Sbjct: 205 ASKKMKDKIGTAYYIAP 221
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 134 LRKLNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERP---------ENNPEKAXXXXXX 182
L+ + G+FG+ L R +NG A+K+L++ N E+
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM----- 59
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L+ + H I+R G + ++ +Y +GG + L R+++ P +A
Sbjct: 60 -------LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKF 110
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
A +V + Y+H I+RDLK +N+L+ + IKI DFG A+
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 143 FAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
QGA G +Y G++VAI+ + + P+K K+ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN-----KNPNIVN 82
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
++ + +V EY GGS+ +T + ++ L + + ++H I
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQVI 139
Query: 261 HRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
HR++KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 146 GAFGKLYRGTYNGE----DVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
G FG + +G Y DVAIK+L++ EKA + L + IVR
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEEMMREAQI--MHQLDNPYIVRL 401
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIH 261
IG C+ + +V E A GG + +FL ++ +P+ + V+ GM Y+ F+H
Sbjct: 402 IGVCQAEALM-LVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 262 RDLKSDNLLISADKSIKIADFGVAR 286
R+L + N+L+ KI+DFG+++
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 145 QGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G+FG++++G N + VAIKI++ E+A L+ + ++
Sbjct: 33 KGSFGEVFKGIDNRTQQVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL-KLAVKQAL-DVARGMAYVHGLGFI 260
G+ K I+ EY GGS L RA P + + L ++ +G+ Y+H I
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSEKKI 142
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 306
HRD+K+ N+L+S +K+ADFGVA T+ GT WMAP
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 96 FRPGKVTHALNDDALAQALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFG--KLYR 153
F+ G VTH AL + ++D P L++Y +G+ G L R
Sbjct: 20 FQSGVVTHEQFKAAL-RMVVDQGDPRLLLDSY-------------VKIGEGSTGIVCLAR 65
Query: 154 GTYNGEDVAIKILE-RPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWC 212
++G VA+K+++ R + E + +H N+V +
Sbjct: 66 EKHSGRQVAVKMMDLRKQQRRE-------LLFNEVVIMRDYQHFNVVEMYKSYLVGEELW 118
Query: 213 IVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNL 269
++ E+ +GG++ +++ + + + AV QAL AY+H G IHRD+KSD++
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQAL------AYLHAQGVIHRDIKSDSI 172
Query: 270 LISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
L++ D +K++DFG A+I GT WMAP
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVA 248
L L H NI++ + + +V E KGG + + + R + V + +KQ L
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL--- 146
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMA 305
G+ Y+H +HRDLK +NLL+ + D IKI DFG++ + + M GT ++A
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIA 206
Query: 306 P 306
P
Sbjct: 207 P 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVA 248
L +L H NI++ + + +VTE+ +GG + Q + R + +KQ L
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL--- 156
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMA 305
G+ Y+H +HRD+K +N+L+ S IKI DFG++ + + GT ++A
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 306 P 306
P
Sbjct: 217 P 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 139 MGTAFAQGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
+G G FGK+ G + G VA+KIL R + ++ L +H
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQNLKLFRHP 71
Query: 197 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
+I++ + +V EY GG + ++ + R ++ A + + + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEME-ARRLFQQILSAVDYCHR 129
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+ A + KIADFG++ + E + G+ + AP
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 142 AFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G+FG+ L + G++ A+K++ + + K L L H NI+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIM 95
Query: 200 RFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
+ + + +V E GG + + ++R++ V ++Q L G+ Y+H
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK 152
Query: 259 FIHRDLKSDNLLI---SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ S D +I+I DFG++ ++ M + GT ++AP
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 139 MGTAFAQGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
+G G FGK+ G + G VA+KIL R + ++ L +H
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQNLKLFRHP 71
Query: 197 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG 256
+I++ + +V EY GG + ++ + R ++ A + + + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEME-ARRLFQQILSAVDYCHR 129
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +N+L+ A + KIADFG++ + E + G+ + AP
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I+E E KA +A++ + +
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV---MASVDNPH 112
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 113 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 200
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 145 QGAFGKLYRGTYNGED--VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G+FG++++G N VAIKI++ E+A L+ + ++
Sbjct: 37 KGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHR 262
G+ K I+ EY GGS L + +++ L +G+ Y+H IHR
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKKIHR 148
Query: 263 DLKSDNLLISADKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 306
D+K+ N+L+S +K+ADFGVA T+ GT WMAP
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
L L+H N+V + C+K+ W +V E+ ++ L N + ++ K +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFV-DHTILDDLELFPN-GLDYQVVQKYLFQIIN 135
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
G+ + H IHRD+K +N+L+S +K+ DFG AR + E E T + AP
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+V+ A + +V EY GG + ++ N VP K A +V + +H +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 306
GFIHRD+K DN+L+ +K+ADFG +++ EGM GT +++P
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISP 243
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 210 VWCIVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+W +V E+ +GG++ +T + + + LAV QAL V +H G IHRD+KS
Sbjct: 96 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 148
Query: 267 DNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
D++L++ D +K++DFG A++ + GT WMAP
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+WT++ ++G +G FG +Y R + +A+K+L + EKA
Sbjct: 8 QWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREV 63
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L ++ +R + A +
Sbjct: 64 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTAT-YITE 120
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ ++ +KIADFG + + + T GT ++ P
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 179
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+V+ A + +V EY GG + ++ N VP K A +V + +H +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 306
GFIHRD+K DN+L+ +K+ADFG +++ EGM GT +++P
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISP 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 210 VWCIVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+W +V E+ +GG++ +T + + + LAV QAL V +H G IHRD+KS
Sbjct: 92 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 144
Query: 267 DNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
D++L++ D +K++DFG A++ + GT WMAP
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+V+ A + +V EY GG + ++ N VP K A +V + +H +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 306
GFIHRD+K DN+L+ +K+ADFG +++ EGM GT +++P
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISP 243
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 143 FAQGAFGKLYRGTYNGED--VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
+G+FG++++G N VAIKI++ E+A L+ + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ G+ K I+ EY GGS L + +++ L +G+ Y+H I
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKKI 141
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 306
HRD+K+ N+L+S +K+ADFGVA T+ GT WMAP
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 188
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 210 VWCIVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+W +V E+ +GG++ +T + + + LAV QAL V +H G IHRD+KS
Sbjct: 103 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 155
Query: 267 DNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
D++L++ D +K++DFG A++ + GT WMAP
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 210 VWCIVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+W +V E+ +GG++ +T + + + LAV QAL V +H G IHRD+KS
Sbjct: 101 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 153
Query: 267 DNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
D++L++ D +K++DFG A++ + GT WMAP
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 210 VWCIVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+W +V E+ +GG++ +T + + + LAV QAL V +H G IHRD+KS
Sbjct: 146 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 198
Query: 267 DNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
D++L++ D +K++DFG A++ + GT WMAP
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 12/186 (6%)
Query: 126 NYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXX 185
N+DE I + G +G FG +Y+G N VA+K L + +
Sbjct: 17 NFDERPISVG----GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 72
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK--LAVKQ 243
A +H N+V +G C+V Y GS+ L+ PL K
Sbjct: 73 KVX--AKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-PLSWHXRCKI 129
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIE---VQTEGMTPETGT 300
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR Q + GT
Sbjct: 130 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189
Query: 301 YRWMAP 306
+ AP
Sbjct: 190 TAYXAP 195
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 20/197 (10%)
Query: 121 TEGLEN-YDEWTID---LRKLNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPE 174
+ G EN Y + TID + K +G+ GAFG L +G + IK + N +
Sbjct: 8 SSGRENLYFQGTIDDLFIFKRKLGS----GAFGDVHLVEERSSGLERVIKTI-----NKD 58
Query: 175 KAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA 234
++ L +L H NI++ IV E +GG + + + Q R
Sbjct: 59 RSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG 118
Query: 235 VPLKLAVKQAL--DVARGMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVARIEV 289
L L + +AY H +H+DLK +N+L S IKI DFG+A +
Sbjct: 119 KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
Query: 290 QTEGMTPETGTYRWMAP 306
E T GT +MAP
Sbjct: 179 SDEHSTNAAGTALYMAP 195
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 145 QGAFGKLYRGTYNGED--VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G+FG++++G N VAIKI++ E+A L+ + ++
Sbjct: 17 KGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHR 262
G+ K I+ EY GGS L + +++ L +G+ Y+H IHR
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKKIHR 128
Query: 263 DLKSDNLLISADKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 306
D+K+ N+L+S +K+ADFGVA T+ GT WMAP
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 210 VWCIVTEYAKGGSVRQFLTR---RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKS 266
+W +V E+ +GG++ +T + + + LAV QAL V +H G IHRD+KS
Sbjct: 223 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 275
Query: 267 DNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 306
D++L++ D +K++DFG A++ + GT WMAP
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ H N++ G K I+TE+ + GS+ FL + + ++L V +A
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VGMLRGIAA 120
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETG-----TYRW 303
GM Y+ + ++HR L + N+L++++ K++DFG++R +E T T + RW
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 304 MAP 306
AP
Sbjct: 181 TAP 183
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
+ GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 145 QGAFGKLYRGTYNGED--VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G+FG++++G N VAIKI++ E+A L+ + ++
Sbjct: 17 KGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHR 262
G+ K I+ EY GGS L + +++ L +G+ Y+H IHR
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKKIHR 128
Query: 263 DLKSDNLLISADKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 306
D+K+ N+L+S +K+ADFGVA T+ GT WMAP
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
+ GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 146 GAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
G FG +L R E VA+K +ER E E +L+H NIVRF
Sbjct: 30 GNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKE 82
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR--------GMAYVH 255
IV EYA GG + + + A + + D AR G++Y H
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN----------AGRFSEDEARFFFQQLISGVSYAH 132
Query: 256 GLGFIHRDLKSDNLLI--SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ HRDLK +N L+ S +KIADFG ++ V GT ++AP
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 133 DLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
D + + G FG +L R + E VA+K +ER E E
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR------ 69
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
+L+H NIVRF IV EYA GG + + + + Q L G
Sbjct: 70 -SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISG 126
Query: 251 MAYVHGLGFIHRDLKSDNLLI--SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
++Y H + HRDLK +N L+ S +KI DFG ++ V GT ++AP
Sbjct: 127 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 103
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 104 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 84
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 85 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 143 FAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
+G++G +Y+ + G+ VAIK + P ++ H +V+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV------PVESDLQEIIKEISIMQQCDSPH--VVK 88
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ G+ K IV EY GSV + R +N+ + +G+ Y+H + I
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 261 HRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
HRD+K+ N+L++ + K+ADFGVA ++ GT WMAP
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAP 194
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-----VAIKILERPENNPEKAXXX 179
E ++ I ++ +G +G FG + ED VA+K+L+ A
Sbjct: 13 EKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK----ADIIASSD 68
Query: 180 XXXXXXXXXXLATLKHLNIVRFIG-ACRKRM-----VWCIVTEYAKGGSVRQFLTRRQ-- 231
+ H ++ + +G + R R + ++ + K G + FL +
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128
Query: 232 --NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+PL+ V+ +D+A GM Y+ FIHRDL + N +++ D ++ +ADFG++R
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 88
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 89 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 72
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 73 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 116 DHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNG--EDVAIKILERPENNP 173
D + P+ L+ + L N +G+FGK+ G E AIKIL++ +
Sbjct: 5 DRKQPSNNLDR-----VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKK---DV 56
Query: 174 EKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRK---RMVWCIVTEYAKGGSVRQFLTRR 230
LA L + + +C + R+ + V EY GG + + +
Sbjct: 57 VIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYF--VMEYVNGGDLMYHIQQV 114
Query: 231 QNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
P AV A +++ G+ ++H G I+RDLK DN+++ ++ IKIADFG+ + E
Sbjct: 115 GKFKEPQ--AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-EHM 171
Query: 291 TEGMTPE--TGTYRWMAP 306
+G+T GT ++AP
Sbjct: 172 MDGVTTREFCGTPDYIAP 189
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 136 KLNMGTAFAQGAFGKLYR--GTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
+ N+ +G+FG++ + ++ A+K++ N L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI----NKASAKNKDTSTILREVELLKKL 78
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMA 252
H NI++ + IV E GG + + + R++ +KQ V G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ---VFSGIT 135
Query: 253 YVHGLGFIHRDLKSDNLLISA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
Y+H +HRDLK +N+L+ + D IKI DFG++ Q M GT ++AP
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 135 RKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+++ M +G +G+++ G + GE VA+K+ E ++
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEE-------ASWFRETEIYQTVLMR 89
Query: 195 HLNIVRFIGACRKRM-VWC---IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
H NI+ FI A K W ++T+Y + GS+ +L ++ + K +K A G
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSG 146
Query: 251 MAYVHGLGF--------IHRDLKSDNLLISADKSIKIADFGVAR---IEVQTEGMTPET- 298
+ ++H F HRDLKS N+L+ + + IAD G+A + + P T
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 299 -GTYRWMAP 306
GT R+M P
Sbjct: 207 VGTKRYMPP 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+WT++ ++G +G FG +Y R + +A+K+L + EKA
Sbjct: 8 QWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREV 63
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L ++ +R + A +
Sbjct: 64 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTAT-YITE 120
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A ++Y H IHRD+K +NLL+ ++ +KIADFG
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 75
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A GM Y+
Sbjct: 76 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTPE T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 143 FAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
+G+FG+ L + G++ A+K++ + + K L L H NI +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 201 FIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E GG + + ++R++ V ++Q L G+ Y H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL---SGITYXHKNKI 147
Query: 260 IHRDLKSDNLLI---SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ S D +I+I DFG++ ++ + GT ++AP
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAP 197
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 136 KLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
+ N+ +G+FG++ + ++ A+K++ N L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI----NKASAKNKDTSTILREVELLKKL 78
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMA 252
H NI++ + IV E GG + + + R++ +KQ V G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ---VFSGIT 135
Query: 253 YVHGLGFIHRDLKSDNLLISA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
Y+H +HRDLK +N+L+ + D IKI DFG++ Q M GT ++AP
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T +T GT ++AP
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNG---EDVAIKILERPENNPEKAXXXXXXXXXX 186
W+I+ + GA + + Y E VAIK + N EK
Sbjct: 10 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKE 63
Query: 187 XXXLATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSV----RQFLTRRQNRAVPLKLAV 241
++ H NIV + + K +W +V + GGSV + + + ++++ L +
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 242 KQAL--DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-- 297
+ +V G+ Y+H G IHRD+K+ N+L+ D S++IADFGV+ +T
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 298 ----TGTYRWMAP 306
GT WMAP
Sbjct: 183 RKTFVGTPCWMAP 195
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 31/200 (15%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXXXXXX 184
I L + + FGK+Y+G G + VAIK L+ P +
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 82
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA----VPLKLA 240
A L+H N+V +G K ++ Y G + +FL R +
Sbjct: 83 R-----ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 241 VKQALD----------VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
VK AL+ +A GM Y+ +H+DL + N+L+ ++KI+D G+ R EV
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR-EVY 196
Query: 291 TEGMTPETGT----YRWMAP 306
G RWMAP
Sbjct: 197 AADYYKLLGNSLLPIRWMAP 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 18 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 75 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 130
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T +T GT ++AP
Sbjct: 131 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 177
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 136 KLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
+ N+ +G+FG++ + ++ A+K++ N L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI----NKASAKNKDTSTILREVELLKKL 78
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMA 252
H NI++ + IV E GG + + + R++ +KQ V G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ---VFSGIT 135
Query: 253 YVHGLGFIHRDLKSDNLLISA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
Y+H +HRDLK +N+L+ + D IKI DFG++ Q M GT ++AP
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T +T GT ++AP
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 145 QGAFGKLYRGTYNGEDV--AIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
+G+FGK+ + E+V A+K+L++ K L +KH +V
Sbjct: 48 KGSFGKVLLARHKAEEVFYAVKVLQK--KAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 203 GACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHR 262
+ + V +Y GG + L R + P A A ++A + Y+H L ++R
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR--ARFYAAEIASALGYLHSLNIVYR 163
Query: 263 DLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 306
DLK +N+L+ + I + DFG+ + ++ T GT ++AP
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 29 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 83
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 84 VFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 140
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY G +R FL R + R +L + + + +GM Y+ +HRDL + N+L+
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-QICKGMEYLGSRRCVHRDLAARNILVE 161
Query: 273 ADKSIKIADFGVARI 287
++ +KIADFG+A++
Sbjct: 162 SEAHVKIADFGLAKL 176
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY G +R FL R + R +L + + + +GM Y+ +HRDL + N+L+
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-QICKGMEYLGSRRCVHRDLAARNILVE 149
Query: 273 ADKSIKIADFGVARI 287
++ +KIADFG+A++
Sbjct: 150 SEAHVKIADFGLAKL 164
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 146 GAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
GA+G+ L + G + AIKI+++ L L H NI++
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 204 ACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHR 262
+ + +V E +GG + + + R++ V + +KQ L G Y+H +HR
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL---SGTTYLHKHNIVHR 128
Query: 263 DLKSDNLLI---SADKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 306
DLK +NLL+ S D IKI DFG+ A EV + M GT ++AP
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAP 175
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY G +R FL R + R +L + + + +GM Y+ +HRDL + N+L+
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-QICKGMEYLGSRRCVHRDLAARNILVE 148
Query: 273 ADKSIKIADFGVARI 287
++ +KIADFG+A++
Sbjct: 149 SEAHVKIADFGLAKL 163
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 31/200 (15%)
Query: 132 IDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAXXXXXXXX 184
I L + + FGK+Y+G G + VAIK L+ P +
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65
Query: 185 XXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA----VPLKLA 240
A L+H N+V +G K ++ Y G + +FL R +
Sbjct: 66 R-----ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 241 VKQALD----------VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQ 290
VK AL+ +A GM Y+ +H+DL + N+L+ ++KI+D G+ R EV
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR-EVY 179
Query: 291 TEGMTPETGT----YRWMAP 306
G RWMAP
Sbjct: 180 AADYYKLLGNSLLPIRWMAP 199
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKXVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRGTYNG---EDVAIKILERPENNPEKAXXXXXXXXXX 186
W+I+ + GA + + Y E VAIK + N EK
Sbjct: 5 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKE 58
Query: 187 XXXLATLKHLNIVRFIGA-CRKRMVWCIVTEYAKGGSV----RQFLTRRQNRAVPLKLAV 241
++ H NIV + + K +W +V + GGSV + + + ++++ L +
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 242 KQAL--DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-- 297
+ +V G+ Y+H G IHRD+K+ N+L+ D S++IADFGV+ +T
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 298 ----TGTYRWMAP 306
GT WMAP
Sbjct: 178 RKTFVGTPCWMAP 190
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY G +R FL R + R +L + + + +GM Y+ +HRDL + N+L+
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-QICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 273 ADKSIKIADFGVARI 287
++ +KIADFG+A++
Sbjct: 146 SEAHVKIADFGLAKL 160
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 190 LATLKHLNIVRFIGAC--RKRMVWCIVTEYAKGGSVRQFLTR----RQNRAVPLKLAVKQ 243
L LKH NIVR+ R IV EY +GG + +T+ RQ L V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 244 ALDVARGMAYVHGLG---FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-TG 299
L +A + G +HRDLK N+ + +++K+ DFG+ARI E E G
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG 178
Query: 300 TYRWMAP 306
T +M+P
Sbjct: 179 TPYYMSP 185
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G ++R + + P K A++ D + + + H G IHRD+K N+LIS
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPMTP-KRAIEVIADACQALNFSHQNGIIHRDVKPANILIS 150
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET----GTYRWMAP 306
A ++K+ DFG+AR + +T GT ++++P
Sbjct: 151 ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 143 FAQGAFGKLYRGTYNGED--VAIKI--LERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
+G + +Y+G D VA+K LE E P A L LKH NI
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSL-------LKDLKHANI 62
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDVARGMAYVHG 256
V +V EY ++Q+L N +KL + Q L RG+AY H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLL---RGLAYCHR 118
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+HRDLK NLLI+ +K+ADFG+AR
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDV 247
L L H NIV I +V E+ + +++ L + + +K+ + Q L
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL-- 129
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
RG+A+ H +HRDLK NLLI++D ++K+ADFG+AR + T E T + AP
Sbjct: 130 -RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 142 AFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G+FGK L T G+ VA+KI+ + L L+H +I+
Sbjct: 21 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 77
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVH 255
+ + + +V EYA G + ++ +R K++ ++A + + Y H
Sbjct: 78 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCH 130
Query: 256 GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 181
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 143 FAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
GA+G+ L + G + AIKI+++ L L H NI++
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 201 FIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ + +V E +GG + + + R++ V + +KQ L G Y+H
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHNI 142
Query: 260 IHRDLKSDNLLI---SADKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ S D IKI DFG+ A EV + M GT ++AP
Sbjct: 143 VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAP 192
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
+ GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 142 AFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G+FGK L T G+ VA+KI+ + L L+H +I+
Sbjct: 20 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 76
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVH 255
+ + + +V EYA G + ++ +R K++ ++A + + Y H
Sbjct: 77 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCH 129
Query: 256 GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDV 247
L L H NIV I +V E+ + +++ L + + +K+ + Q L
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL-- 129
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
RG+A+ H +HRDLK NLLI++D ++K+ADFG+AR + T E T + AP
Sbjct: 130 -RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 142 AFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G+FGK L T G+ VA+KI+ + L L+H +I+
Sbjct: 11 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 67
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVH 255
+ + + +V EYA G + ++ +R K++ ++A + + Y H
Sbjct: 68 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCH 120
Query: 256 GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 171
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKXVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG + T G +VA+K L RP N A L + H NI+ +
Sbjct: 36 AQGIVCAAF-DTVLGINVAVKKLSRPFQNQTHAKRAYRELVL----LKCVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++T+ G + ++ R + + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 142 AFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G+FGK L T G+ VA+KI+ + L L+H +I+
Sbjct: 15 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 71
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVH 255
+ + + +V EYA G + ++ +R K++ ++A + + Y H
Sbjct: 72 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCH 124
Query: 256 GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 175
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 145 QGAFGKLYRGTY-----NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G FG +Y G Y N AIK L R + + L H N++
Sbjct: 31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ-----VEAFLREGLLMRGLNHPNVL 85
Query: 200 RFIG-ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
IG + ++ Y G + QF+ R R +K + L VARGM Y+
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 259 FIHRDLKSDNLLISADKSIKIADFGVAR 286
F+HRDL + N ++ ++K+ADFG+AR
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 142 AFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
QGAFG++ + N D +++ + EK LA+L H +VR+
Sbjct: 13 VLGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQYVVRY 67
Query: 202 -------------IGACRKRMVWCIVTEYAKGGSVRQFL---TRRQNRAVPLKLAVKQAL 245
+ A +K+ I EY + G++ + Q R +L +Q L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL-FRQIL 126
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ ++Y+H G IHRDLK N+ I +++KI DFG+A+
Sbjct: 127 E---ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 133 DLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
D + + G FG +L R + E VA+K +ER E
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK-------IAANVKREIINH 69
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
+L+H NIVRF IV EYA GG + + + + Q L G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISG 127
Query: 251 MAYVHGLGFIHRDLKSDNLLI--SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
++Y H + HRDLK +N L+ S +KI DFG ++ V GT ++AP
Sbjct: 128 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + + + L A A ++ G+ ++H G ++RDLK DN+L+
Sbjct: 96 FVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 306
D IKIADFG+ + + + T E GT ++AP
Sbjct: 154 KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAP 188
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKXVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 79
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 80 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 82
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 83 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL-DVA 248
LA + H +V+ A + ++ ++ +GG + TR + + VK L ++A
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELA 140
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 306
G+ ++H LG I+RDLK +N+L+ + IK+ DFG+++ + E GT +MAP
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAP 199
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 74 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 128
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 129 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 185
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 74 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 128
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 129 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 185
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 30 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 84
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 85 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 37 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 91
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 92 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 29 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 83
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 84 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 30 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 84
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 85 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 141
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 37 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 91
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 92 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 148
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 35 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 89
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 90 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 146
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 147 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y + +VAIK L RP N A + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKNIISLLN 90
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 91 VFTPQKT---LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 79
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V I+ + G + ++ R + + + + +A+GM Y+
Sbjct: 80 VCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG+A++
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ + +P ++ K ++ V RG+AY+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +MAP
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMAP 182
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG + T G +VA+K L RP N A L + H NI+ +
Sbjct: 34 AQGIVCAAF-DTVLGINVAVKKLSRPFQNQTHAKRAYRELVL----LKCVNHKNIISLLN 88
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ + E+ V + + + + ++L ++ + G+ ++H G
Sbjct: 89 VFTPQKT---LEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGI 145
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR MTP T + AP
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G ++R + + P K A++ D + + + H G IHRD+K N++IS
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPMTP-KRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET----GTYRWMAP 306
A ++K+ DFG+AR + +T GT ++++P
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G ++R + + P K A++ D + + + H G IHRD+K N++IS
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPMTP-KRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET----GTYRWMAP 306
A ++K+ DFG+AR + +T GT ++++P
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G ++R + + P K A++ D + + + H G IHRD+K N++IS
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPMTP-KRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET----GTYRWMAP 306
A ++K+ DFG+AR + +T GT ++++P
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G ++R + + P K A++ D + + + H G IHRD+K N++IS
Sbjct: 110 IVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 167
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET----GTYRWMAP 306
A ++K+ DFG+AR + +T GT ++++P
Sbjct: 168 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 146 GAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
G FG +L R E VA+K +ER E +L+H NIVRF
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHR-------SLRHPNIVRFKE 83
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTR----RQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
I+ EYA GG + + + ++ A + +Q L G++Y H +
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEA---RFFFQQLLS---GVSYCHSMQI 137
Query: 260 IHRDLKSDNLLI--SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
HRDLK +N L+ S +KI DFG ++ V GT ++AP
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 186
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G ++R + + P K A++ D + + + H G IHRD+K N++IS
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPMTP-KRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET----GTYRWMAP 306
A ++K+ DFG+AR + +T GT ++++P
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 20 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 77 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 132
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 133 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 179
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 8 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 63
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 64 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 120
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 179
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 133 DLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
D + + G FG +L R + E VA+K +ER E E
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR------ 70
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
+L+H NIVRF IV EYA GG + + + + Q L G
Sbjct: 71 -SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISG 127
Query: 251 MAYVHGLGFIHRDLKSDNLLI--SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
++Y H + HRDLK +N L+ S +KI FG ++ V GT ++AP
Sbjct: 128 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 122 EGLENYDEWTIDLRKLNMGTAFAQGAFGKLY-----RGTYNGEDVAIKILERPENNPEKA 176
EG E D +L K+ QG+FGK++ G+ + A+K+L++
Sbjct: 16 EGHEKADPSQFELLKV-----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---- 66
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP 236
L + H IV+ A + ++ ++ +GG + TR +
Sbjct: 67 VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMF 123
Query: 237 LKLAVKQAL-DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT 295
+ VK L ++A + ++H LG I+RDLK +N+L+ + IK+ DFG+++ + E
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
Query: 296 PE-TGTYRWMAP 306
GT +MAP
Sbjct: 184 YSFCGTVEYMAP 195
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 143 FAQGAFGKLYRGTYN-GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+G +G +Y+ N GE A+K + R E E L LKH NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-RLEKEDE---GIPSTTIREISILKELKHSNIVKL 65
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDVARGMAYVHGLGF 259
+ +V E+ +++ L + +V K + Q L+ G+AY H
Sbjct: 66 YDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLN---GIAYCHDRRV 121
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +KIADFG+AR + T E T + AP
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 63
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 121
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPP 175
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 143 FAQGAFGKLYRGTYN-GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+G +G +Y+ N GE A+K + R E E L LKH NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-RLEKEDE---GIPSTTIREISILKELKHSNIVKL 65
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDVARGMAYVHGLGF 259
+ +V E+ +++ L + +V K + Q L+ G+AY H
Sbjct: 66 YDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLN---GIAYCHDRRV 121
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +KIADFG+AR + T E T + AP
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 9 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 64
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 65 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 121
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 180
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 145 QGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH--LNIVR 200
+G FGK L R G A+KIL + A L +H L ++
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ R+ C V EYA GG + L+R R + A ++ + Y+H +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 261 HRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 306
+RD+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 68
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G V + L + + ++A +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANAL 126
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 180
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 116
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPP 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 62
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 120
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 174
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 116
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 175
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + M PE T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 68
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 126
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 180
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + M PE T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 9 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 64
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 65 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 121
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 180
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 133 DLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
D + + G FG +L R + E VA+K +ER E E
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR------ 70
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
+L+H NIVRF IV EYA GG + + + + Q L G
Sbjct: 71 -SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISG 127
Query: 251 MAYVHGLGFIHRDLKSDNLLI--SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
++Y H + HRDLK +N L+ S +KI FG ++ V GT ++AP
Sbjct: 128 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 122 EGLENYDEWTIDLRKLNMGTAFAQGAFGKLY-----RGTYNGEDVAIKILERPENNPEKA 176
EG E D +L K+ QG+FGK++ G+ + A+K+L++
Sbjct: 17 EGHEKADPSQFELLKV-----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---- 67
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP 236
L + H IV+ A + ++ ++ +GG + TR +
Sbjct: 68 VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMF 124
Query: 237 LKLAVKQAL-DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT 295
+ VK L ++A + ++H LG I+RDLK +N+L+ + IK+ DFG+++ + E
Sbjct: 125 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 184
Query: 296 PE-TGTYRWMAP 306
GT +MAP
Sbjct: 185 YSFCGTVEYMAP 196
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 80
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 138
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 192
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 7 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 62
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 63 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 119
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 178
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 143 FAQGAFGKLYRGTYN-GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
+G +G +Y+ N GE A+K + R E E L LKH NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI-RLEKEDE---GIPSTTIREISILKELKHSNIVKL 65
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQN--RAVPLKLAVKQALDVARGMAYVHGLGF 259
+ +V E+ +++ L + +V K + Q L+ G+AY H
Sbjct: 66 YDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLN---GIAYCHDRRV 121
Query: 260 IHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+HRDLK NLLI+ + +KIADFG+AR + T E T + AP
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 63
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 121
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 175
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 66
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 124
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 178
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 230 RQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI-SADKSIKIADFGVARIE 288
R R++P+ L + R + ++H LG HRD+K NLL+ S D ++K+ DFG A+
Sbjct: 133 RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192
Query: 289 VQTEGMTPETGTYRWMAP 306
+ +E + + AP
Sbjct: 193 IPSEPSVAXICSRFYRAP 210
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 122 EGLENYDEWTIDLRKLNMGTAFAQGAFGKLY-----RGTYNGEDVAIKILERPENNPEKA 176
EG E D +L K+ QG+FGK++ G+ + A+K+L++
Sbjct: 16 EGHEKADPSQFELLKV-----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---- 66
Query: 177 XXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP 236
L + H IV+ A + ++ ++ +GG + TR +
Sbjct: 67 VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMF 123
Query: 237 LKLAVKQAL-DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT 295
+ VK L ++A + ++H LG I+RDLK +N+L+ + IK+ DFG+++ + E
Sbjct: 124 TEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
Query: 296 PE-TGTYRWMAP 306
GT +MAP
Sbjct: 184 YSFCGTVEYMAP 195
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 89
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 147
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 64
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 122
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 176
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 116
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 175
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R +A+K+L + + EKA +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 60
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 118
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + T GT ++ P
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 172
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y +VAIK L RP N A L +K +N IG
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRE-------LVLMKCVNHKNIIG 87
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ E+ V + + ++ + ++L ++ + G+ ++H G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G+FGK+ T+ + VA+K + R K L L+H +I+
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISR---QLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGF 259
+ +V EYA GG + ++ ++ Q + A + Y H
Sbjct: 73 KLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRHKI 129
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRDLK +NLL+ + ++KIADFG++ I + G+ + AP
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 176
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 5 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 60
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 61 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 117
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + T +GT ++ P
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPP 176
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y +VAIK L RP N A L +K +N IG
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRE-------LVLMKVVNHKNIIG 87
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ E+ V + + ++ + ++L ++ + G+ ++H G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 190 LATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--AL 245
++ L H NIV+ G RMV E+ G + R ++A P+K +VK L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMV----MEFVPCGDLYH---RLLDKAHPIKWSVKLRLML 129
Query: 246 DVARGMAYVHGLG--FIHRDLKSDNLLI-----SADKSIKIADFGVARIEVQTEGMTPET 298
D+A G+ Y+ +HRDL+S N+ + +A K+ADFG+++ V + ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS--VSGLL 187
Query: 299 GTYRWMAP 306
G ++WMAP
Sbjct: 188 GNFQWMAP 195
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+V+ A + +V EY GG + ++ N VP K A +V + +H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 306
G IHRD+K DN+L+ +K+ADFG +++ GM GT +++P
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISP 244
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXX 180
G ++YDE L+ + G F K+ + GE VAIKI+++
Sbjct: 1 GPKDYDEL---LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDK-----NTLGSDL 52
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKL 239
L L+H +I + +V EY GG + ++ + + ++
Sbjct: 53 PRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV 112
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA 285
+Q + +AYVH G+ HRDLK +NLL +K+ DFG+
Sbjct: 113 VFRQ---IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLC 155
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 143 FAQGAFGKLYRGTYNGEDVAIKI----LERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
G + +Y+G V + + L+ E P A + LKH NI
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISL-------MKELKHENI 65
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQ----NRAVPLKLAVKQALDVARGMAYV 254
VR +V E+ +++++ R R + L L + +G+A+
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
H +HRDLK NLLI+ +K+ DFG+AR + + E T + AP
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 142 AFAQGAFGKLYRGTY--NGEDVAIK--ILERPENNPEKAXXXXXXXXXXXXXLATLKHLN 197
GAFG +Y+G + GE V I I E E KA +A++ + +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 82
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+ R +G C V ++ + G + ++ R + + + + +A+GM Y+
Sbjct: 83 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 258 GFIHRDLKSDNLLISADKSIKIADFGVARI 287
+HRDL + N+L+ + +KI DFG A++
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
AQG Y +VAIK L RP N A L +K +N IG
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRE-------LVLMKCVNHKNIIG 87
Query: 204 ACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQA----LDVARGMAYVHGLGF 259
+ E+ V + + ++ + ++L ++ + G+ ++H G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 260 IHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L + +G F ++YR +G VA+K ++ + KA L
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL---LK 87
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLT--RRQNRAVPLKLAVKQALDVAR 249
L H N++++ + + IV E A G + + + ++Q R +P + K + +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 306
+ ++H +HRD+K N+ I+A +K+ D G+ R +T GT +M+P
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR--- 200
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 201 --FIGACRKRMVWC-IVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
+ +K +V+ +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + MTP T + AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLLI+ +KI DFG+ARI E G E RW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 190 LATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--AL 245
++ L H NIV+ G RMV E+ G + R ++A P+K +VK L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMV----MEFVPCGDLYH---RLLDKAHPIKWSVKLRLML 129
Query: 246 DVARGMAYVHGLG--FIHRDLKSDNLLI-----SADKSIKIADFGVARIEVQTEGMTPET 298
D+A G+ Y+ +HRDL+S N+ + +A K+ADFG ++ V + ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS--VSGLL 187
Query: 299 GTYRWMAP 306
G ++WMAP
Sbjct: 188 GNFQWMAP 195
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 95
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 153
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 154 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 207
Query: 306 P 306
P
Sbjct: 208 P 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + F +RQ R +P + A + +++ + Y+H G I+RDLK DN+L+
Sbjct: 130 FVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 187
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE------TGTYRWMAP 306
++ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 188 SEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTPNYIAP 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 87
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 145
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANSFVGTAQYVS 199
Query: 306 P 306
P
Sbjct: 200 P 200
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 88
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 200
Query: 306 P 306
P
Sbjct: 201 P 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + F +RQ R +P + A + +++ + Y+H G I+RDLK DN+L+
Sbjct: 98 FVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 155
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE------TGTYRWMAP 306
++ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 156 SEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAP 190
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 88
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 200
Query: 306 P 306
P
Sbjct: 201 P 201
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 87
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 145
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 199
Query: 306 P 306
P
Sbjct: 200 P 200
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 90
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + F +RQ R +P + A + +++ + Y+H G I+RDLK DN+L+
Sbjct: 83 FVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 140
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE------TGTYRWMAP 306
++ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 141 SEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAP 175
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + F +RQ R +P + A + +++ + Y+H G I+RDLK DN+L+
Sbjct: 87 FVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 144
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE------TGTYRWMAP 306
++ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 145 SEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAP 179
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 90
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANSFVGTAQYVS 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 88
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 200
Query: 306 P 306
P
Sbjct: 201 P 201
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 90
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 72
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 130
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 184
Query: 306 P 306
P
Sbjct: 185 P 185
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 93
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 151
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 205
Query: 306 P 306
P
Sbjct: 206 P 206
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 90
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 66
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 124
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 178
Query: 306 P 306
P
Sbjct: 179 P 179
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 68
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 126
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 127 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 180
Query: 306 P 306
P
Sbjct: 181 P 181
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 91
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 149
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 203
Query: 306 P 306
P
Sbjct: 204 P 204
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 32 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 192
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 65
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 123
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 124 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 177
Query: 306 P 306
P
Sbjct: 178 P 178
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + + + L A A ++ G+ ++H G ++RDLK DN+L+
Sbjct: 95 FVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 306
D IKIADFG+ + + + T GT ++AP
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 63
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 121
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+Y H IHRD+K +NLL+ + +KIADFG + + + GT ++ P
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPP 175
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 91
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 149
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANSFVGTAQYVS 203
Query: 306 P 306
P
Sbjct: 204 P 204
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 88
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANAFVGTAQYVS 200
Query: 306 P 306
P
Sbjct: 201 P 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 306 P 306
P
Sbjct: 203 P 203
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 35 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 195
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 43 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 137 LNMGTAFAQGAFGK--LYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
G +G+F L R + AIKILE+ E ++ L
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 67
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H V+ + YAK G + +++ R+ + ++ + Y+
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 125
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 305
HG G IHRDLK +N+L++ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 126 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 179
Query: 306 P 306
P
Sbjct: 180 P 180
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 50 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 210
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 141 TAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
T GA+G + +GE VAIK L RP + L LKH+
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-------EIFAKRAYRELLLLKHMQH 82
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ----ALDVARGMAYV 254
IG + + V F+ + + LK + ++ + +G+ Y+
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
H G +HRDLK NL ++ D +KI DFG+AR
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 39 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 199
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 43 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 137 LNMGTAFAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+ + +GA+G + T+ GE VAIK +E P + P A L K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKI----LKHFK 67
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD-----VAR 249
H NI+ R + + +++ + +R + ++ + R
Sbjct: 68 HENIITIFNIQRPDSF----ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-----------EVQTEGMTPET 298
+ +HG IHRDLK NLLI+++ +K+ DFG+ARI Q GMT
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 299 GTYRWMAP 306
T + AP
Sbjct: 184 ATRWYRAP 191
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 9 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 64
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G V + L + + +
Sbjct: 65 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITE 121
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A ++Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 116
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A ++Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 66
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 124
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 89
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 147
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 116
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPP 175
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLAT 192
D R L +G+F +Y+G V + E + K+ L
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEX--LKG 81
Query: 193 LKHLNIVRFIGA----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
L+H NIVRF + + + +VTE G+++ +L R + +K+ +
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLRSWCRQIL 139
Query: 249 RGMAYVHGLG--FIHRDLKSDNLLISADK-SIKIADFGVARIE 288
+G+ ++H IHRDLK DN+ I+ S+KI D G+A ++
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 6 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 61
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 62 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 118
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A ++Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 7 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 62
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 63 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 119
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIADFG + + + GT ++ P
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPP 178
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 44 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 204
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPET-GTYRWM 304
D+ +G+ Y+H IHRD+K NLL+ D IKIADFGV+ ++ + T GT +M
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFM 204
Query: 305 AP 306
AP
Sbjct: 205 AP 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 7 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 62
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 63 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 119
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A ++Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 6 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 61
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 62 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 118
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIA+FG + + + T GT ++ P
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPP 177
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 65 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 7 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 62
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R G ++ EYA G+V + L + + +
Sbjct: 63 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 119
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+A ++Y H IHRD+K +NLL+ + +KIA+FG + + + T GT ++ P
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPP 178
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 134 LRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
L +G +G FG +Y R + +A+K+L + + EKA +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQ-S 64
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM 251
L+H NI+R G ++ EYA G+V + L + + ++A +
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANAL 122
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+Y H IHRD+K +NLL+ + +KIADFG
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 142 AFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
QGAFG++ + N D +++ + EK LA+L H +VR+
Sbjct: 13 VLGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQYVVRY 67
Query: 202 -------------IGACRKRMVWCIVTEYAKGGSVRQFL---TRRQNRAVPLKLAVKQAL 245
+ A +K+ I EY + ++ + Q R +L +Q L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL-FRQIL 126
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ ++Y+H G IHRDLK N+ I +++KI DFG+A+
Sbjct: 127 E---ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 137 LNMGTAFAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+ + +GA+G + T+ GE VAIK +E P + P A L K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKI----LKHFK 67
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD-----VAR 249
H NI+ R + + +++ + +R + ++ + R
Sbjct: 68 HENIITIFNIQRPDSF----ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-----------EVQTEGMTPET 298
+ +HG IHRDLK NLLI+++ +K+ DFG+ARI Q GMT
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 299 GTYRWMAP 306
T + AP
Sbjct: 184 ATRWYRAP 191
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 15/227 (6%)
Query: 84 RHNYSVSVGQSVFRPGKVTHALNDDALAQALMDHRYPTEGLENYDEWTIDLRKLNMGTAF 143
R Y V + R GK T + N D + YP +D L ++
Sbjct: 4 RRGYDVDEQGKIVR-GKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHV---LDHYDIHEEL 59
Query: 144 AQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
GAFG ++R T G + A K + P + ++ ++ L+H +V
Sbjct: 60 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT------MSVLRHPTLVNL 113
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIH 261
A ++ E+ GG + + + N+ + AV+ V +G+ ++H ++H
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 262 RDLKSDNLLISADKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
DLK +N++ + +S +K+ DFG+ + + TGT + AP
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 15/227 (6%)
Query: 84 RHNYSVSVGQSVFRPGKVTHALNDDALAQALMDHRYPTEGLENYDEWTIDLRKLNMGTAF 143
R Y V + R GK T + N D + YP +D L ++
Sbjct: 110 RRGYDVDEQGKIVR-GKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHV---LDHYDIHEEL 165
Query: 144 AQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
GAFG ++R T G + A K + P + ++ ++ L+H +V
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT------MSVLRHPTLVNL 219
Query: 202 IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIH 261
A ++ E+ GG + + + N+ + AV+ V +G+ ++H ++H
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNYVH 278
Query: 262 RDLKSDNLLISADKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
DLK +N++ + +S +K+ DFG+ + + TGT + AP
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 110 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 270
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 59 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 219
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 36 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 196
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ADFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
RG+ Y+H G IHRDLK N+ ++ D ++I DFG+AR E MT T + AP
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAP 197
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
RG+ Y+H G IHRDLK N+ ++ D ++I DFG+AR E MT T + AP
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAP 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 65 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 144 AQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
A+G FG +++ + VA+KI + ++ +KH N+++FI
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFST-------PGMKHENLLQFIA 76
Query: 204 ACRKRM-----VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH--- 255
A ++ +W ++T + GS+ +L + + A ++RG++Y+H
Sbjct: 77 AEKRGSNLEVELW-LITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 256 ----GLG----FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTP------ETGTY 301
G G HRD KS N+L+ +D + +ADFG+A V+ E P + GT
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA---VRFEPGKPPGDTHGQVGTR 189
Query: 302 RWMAP 306
R+MAP
Sbjct: 190 RYMAP 194
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 67 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 227
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 146 GAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF-- 201
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 69 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 202 ----IGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA---VPLKLAVKQALDVARGMAYV 254
G + + +V +Y R + R +RA +P+ + R +AY+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 255 HGLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
H G HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 229
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L++ R +P ++A ++ + VH LG++HRD+K DN+L+
Sbjct: 138 LVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD 196
Query: 273 ADKSIKIADFG 283
I++ADFG
Sbjct: 197 RCGHIRLADFG 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 190 LATLKHLNIVRFIGAC--RKRMVWCIVTEYAKGGSVRQFLTR----RQNRAVPLKLAVKQ 243
L LKH NIVR+ R IV EY +GG + +T+ RQ L V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 244 ALDVARGMAYVHGLG---FIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG 299
L +A + G +HRDLK N+ + +++K+ DFG+ARI T G
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 178
Query: 300 TYRWMAP 306
T +M+P
Sbjct: 179 TPYYMSP 185
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 190 LATLKHLNIVRFIGAC--RKRMVWCIVTEYAKGGSVRQFLTR----RQNRAVPLKLAVKQ 243
L LKH NIVR+ R IV EY +GG + +T+ RQ L V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 244 ALDVARGMAYVHGLG---FIHRDLKSDNLLISADKSIKIADFGVARI-EVQTEGMTPETG 299
L +A + G +HRDLK N+ + +++K+ DFG+ARI T G
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG 178
Query: 300 TYRWMAP 306
T +M+P
Sbjct: 179 TPYYMSP 185
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H NI++ + +V + K G + +LT + + L+ K+ + R + V
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEV 136
Query: 255 ----HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
H L +HRDLK +N+L+ D +IK+ DFG + E + GT ++AP
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 192
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H NI++ + +V + K G + +LT + + L+ K+ + R + V
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEV 136
Query: 255 ----HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
H L +HRDLK +N+L+ D +IK+ DFG + E + GT ++AP
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAP 192
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 145 QGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
QG FG++++ + G+ VA+K + EN E L LKH N+V I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 83
Query: 203 GACRKRMV---WCIVTEYAKGGSVRQFLT-RRQNRAVPLKLA-VKQALD-VARGMAYVHG 256
CR + C + Y L N V L+ +K+ + + G+ Y+H
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+HRD+K+ N+LI+ D +K+ADFG+AR
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 190 LATLKHLNIVRFIGACRK--RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--AL 245
++ L H NIV+ G RMV E+ G + R ++A P+K +VK L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMV----MEFVPCGDLYH---RLLDKAHPIKWSVKLRLML 129
Query: 246 DVARGMAYVHGLG--FIHRDLKSDNLLI-----SADKSIKIADFGVARIEVQTEGMTPET 298
D+A G+ Y+ +HRDL+S N+ + +A K+ADF +++ V + ++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS--VSGLL 187
Query: 299 GTYRWMAP 306
G ++WMAP
Sbjct: 188 GNFQWMAP 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H NI++ + +V + K G + +LT + + L+ K+ + R + V
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEV 123
Query: 255 ----HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
H L +HRDLK +N+L+ D +IK+ DFG + E + GT ++AP
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 179
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 137 LNMGTAFAQGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+ + +GA+G + T+ GE VAIK +E P + P A L K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKI----LKHFK 67
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD-----VAR 249
H NI+ R + + +++ + +R + ++ + R
Sbjct: 68 HENIITIFNIQRPDSF----ENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI 287
+ +HG IHRDLK NLLI+++ +K+ DFG+ARI
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 139 MGTAFAQGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
M G FG + R + GE VAIK R E +P+ + L H
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKN----RERWCLEIQIMKKLNHP 73
Query: 197 NIV--RFIGACRKRM----VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL-DVAR 249
N+V R + +++ + + EY +GG +R++L + +N + ++ L D++
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSI---KIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ Y+H IHRDLK +N+++ KI D G A+ Q E T GT +++AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 193
Query: 303 WMAP 306
+ AP
Sbjct: 194 YRAP 197
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 139 MGTAFAQGAFGKLYRGTYN--GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
M G FG + R + GE VAIK R E +P+ + L H
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKN----RERWCLEIQIMKKLNHP 72
Query: 197 NIV--RFIGACRKRM----VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL-DVAR 249
N+V R + +++ + + EY +GG +R++L + +N + ++ L D++
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSI---KIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ Y+H IHRDLK +N+++ KI D G A+ Q E T GT +++AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G+ ++H G IHRDLK N+++ +D ++KI DFG+AR + M P T + AP
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 145 QGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
QG FG++++ + G+ VA+K + EN E L LKH N+V I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 83
Query: 203 GACRKRMVWCIVTEY--AKGGSVRQFLTRRQNRA-----VPLKLAVKQALDVAR----GM 251
CR + + Y KG F + A V +K + + V + G+
Sbjct: 84 EICRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Y+H +HRD+K+ N+LI+ D +K+ADFG+AR
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 145 QGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
QG FG++++ + G+ VA+K + EN E L LKH N+V I
Sbjct: 27 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 82
Query: 203 GACRKRMVWCIVTEY--AKGGSVRQFLTRRQNRA-----VPLKLAVKQALDVAR----GM 251
CR + + Y KG F + A V +K + + V + G+
Sbjct: 83 EICRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Y+H +HRD+K+ N+LI+ D +K+ADFG+AR
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQ 243
L +KH NIV ++ + GG + + F T R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLL---ISADKSIKIADFGVARIEVQTEGMTPETGT 300
LD + Y+H LG +HRDLK +NLL + D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 301 YRWMAP 306
++AP
Sbjct: 182 PGYVAP 187
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGTYNGED--VAIKILERP---ENNPEKAXXXXXXXXXXXX 188
L N +G+FGK+ G D A+KIL++ +++ +
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 189 XLATLKHLNIVRFIGACRKRM-VWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L L+ +C + M V EY GG + + + P AV A ++
Sbjct: 79 KPPFLTQLH------SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPH--AVFYAAEI 130
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE--TGTYRWMA 305
A G+ ++ G I+RDLK DN+++ ++ IKIADFG+ + + +G+T + GT ++A
Sbjct: 131 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW-DGVTTKXFCGTPDYIA 189
Query: 306 P 306
P
Sbjct: 190 P 190
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQ 243
L +KH NIV ++ + GG + + F T R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLL---ISADKSIKIADFGVARIEVQTEGMTPETGT 300
LD + Y+H LG +HRDLK +NLL + D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 301 YRWMAP 306
++AP
Sbjct: 182 PGYVAP 187
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
RG+ Y+H G IHRDLK N+ ++ D ++I DFG+AR E MT T + AP
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATRWYRAP 189
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 145 QGAFGKLYRGTY--NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI 202
QG FG++++ + G+ VA+K + EN E L LKH N+V I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 83
Query: 203 GACRKRMVWCIVTEY--AKGGSVRQFLTRRQNRA-----VPLKLAVKQALDVAR----GM 251
CR + + Y KG F + A V +K + + V + G+
Sbjct: 84 EICRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 252 AYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Y+H +HRD+K+ N+LI+ D +K+ADFG+AR
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 37 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 91
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 151
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 152 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 206
Query: 303 WMAP 306
+ AP
Sbjct: 207 YRAP 210
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 38 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 92
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 153 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 38 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 92
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 153 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 207
Query: 303 WMAP 306
+ AP
Sbjct: 208 YRAP 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
++TID ++G +G FG +Y R N +A+K+L + + E
Sbjct: 10 KFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R R ++ E+A G + + L ++ R + A +
Sbjct: 68 Q---SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME-E 122
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A + Y H IHRD+K +NLL+ +KIADFG
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 187
Query: 303 WMAP 306
+ AP
Sbjct: 188 YRAP 191
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG-LGFIHRDLKSDNLL 270
C V EYA GG + L+R R A ++ + Y+H ++RDLK +NL+
Sbjct: 227 CFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 284
Query: 271 ISADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
+ D IKI DFG+ + ++ +G T +T GT ++AP
Sbjct: 285 LDKDGHIKITDFGLCKEGIK-DGATMKTFCGTPEYLAP 321
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDVARG 250
+L H ++V F G +V E + S+ + RR+ P + ++Q + G
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 129
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
Y+H IHRDLK NL ++ D +KI DFG+A ++E E GT ++AP
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V EY GG + + + P AV A ++A G+ ++ G I+RDLK DN+++
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPH--AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 273 ADKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 306
++ IKIADFG+ + + +G+T + GT ++AP
Sbjct: 477 SEGHIKIADFGMCKENIW-DGVTTKXFCGTPDYIAP 511
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK--LAVKQALDVARG 250
L H N+++ A + +V EY GG + + L L +KQ + G
Sbjct: 143 LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ---ICEG 199
Query: 251 MAYVHGLGFIHRDLKSDNLL-ISAD-KSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ ++H + +H DLK +N+L ++ D K IKI DFG+AR E + GT ++AP
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGT-------YNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+++ G +G F K Y T + G+ V +L +P + +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH---- 80
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQAL 245
+L + ++V F G +V E + S+ + RR+ P + ++Q +
Sbjct: 81 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 136
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 304
+G+ Y+H IHRDLK NL ++ D +KI DFG+A +IE E GT ++
Sbjct: 137 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 193
Query: 305 AP 306
AP
Sbjct: 194 AP 195
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDVARG 250
+L H ++V F G +V E + S+ + RR+ P + ++Q + G
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 129
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
Y+H IHRDLK NL ++ D +KI DFG+A ++E E GT ++AP
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
++TID ++G +G FG +Y R N +A+K+L + + E
Sbjct: 11 KFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R R ++ E+A G + + L ++ R + A +
Sbjct: 69 Q---SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME-E 123
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A + Y H IHRD+K +NLL+ +KIADFG
Sbjct: 124 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG-LGFIHRDLKSDNLL 270
C V EYA GG + L+R R A ++ + Y+H ++RDLK +NL+
Sbjct: 224 CFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 281
Query: 271 ISADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
+ D IKI DFG+ + ++ +G T +T GT ++AP
Sbjct: 282 LDKDGHIKITDFGLCKEGIK-DGATMKTFCGTPEYLAP 318
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 141 TAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
T GA+G + +GE VAIK L RP + L LKH+
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-------EIFAKRAYRELLLLKHMQH 100
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ----ALDVARGMAYV 254
IG + + V F+ + + ++ + ++ + +G+ Y+
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYI 160
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
H G +HRDLK NL ++ D +KI DFG+AR
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRW 193
Query: 303 WMAP 306
+ AP
Sbjct: 194 YRAP 197
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGT-------YNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+++ G +G F K Y T + G+ V +L +P + +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH---- 96
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQAL 245
+L + ++V F G +V E + S+ + RR+ P + ++Q +
Sbjct: 97 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 304
+G+ Y+H IHRDLK NL ++ D +KI DFG+A +IE E GT ++
Sbjct: 153 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 305 AP 306
AP
Sbjct: 210 AP 211
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ +L H NI+R +V E GG + + + + R A + DV
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLS 134
Query: 250 GMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+AY H L HRDLK +N L S D +K+ DFG+A + M + GT +++P
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 14 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 68
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 129 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 183
Query: 303 WMAP 306
+ AP
Sbjct: 184 YRAP 187
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
G+ YVH G +HRDLK N L++ D S+K+ DFG+AR
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQ 243
L +KH NIV ++ + GG + + F T R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLL---ISADKSIKIADFGVARIEVQTEGMTPETGT 300
LD + Y+H LG +HRDLK +NLL + D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 301 YRWMAP 306
++AP
Sbjct: 182 PGYVAP 187
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGT-------YNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+++ G +G F K Y T + G+ V +L +P + +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH---- 96
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQAL 245
+L + ++V F G +V E + S+ + RR+ P + ++Q +
Sbjct: 97 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 304
+G+ Y+H IHRDLK NL ++ D +KI DFG+A +IE E GT ++
Sbjct: 153 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 305 AP 306
AP
Sbjct: 210 AP 211
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 20 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 74
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 135 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 28 WEVPERYQNLAPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 82
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 83 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 142
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 143 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 197
Query: 303 WMAP 306
+ AP
Sbjct: 198 YRAP 201
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQ 243
L +KH NIV ++ + GG + + F T R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLL---ISADKSIKIADFGVARIEVQTEGMTPETGT 300
LD + Y+H LG +HRDLK +NLL + D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 301 YRWMAP 306
++AP
Sbjct: 182 PGYVAP 187
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDVARG 250
+L H ++V F G +V E + S+ + RR+ P + ++Q + G
Sbjct: 77 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 133
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
Y+H IHRDLK NL ++ D +KI DFG+A ++E E GT ++AP
Sbjct: 134 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 23 WEVPERYQNL-SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 77
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 138 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 20/182 (10%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGT-------YNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
+++ G +G F K Y T + G+ V +L +P + +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH---- 96
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQAL 245
+L + ++V F G +V E + S+ + RR+ P + ++Q +
Sbjct: 97 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 304
+G+ Y+H IHRDLK NL ++ D +KI DFG+A +IE E GT ++
Sbjct: 153 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 305 AP 306
AP
Sbjct: 210 AP 211
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ADFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQ 243
L +KH NIV +V + GG + + F T + + ++Q
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL-----IRQ 128
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISA---DKSIKIADFGVARIEVQTEGMTPETGT 300
LD + Y+H +G +HRDLK +NLL + + I I+DFG++++E + + M+ GT
Sbjct: 129 VLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT 185
Query: 301 YRWMAP 306
++AP
Sbjct: 186 PGYVAP 191
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 141 TAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
T +G +G++Y+ T E VAIK + R E+ E L L+H NI
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSL---LKELQHRNI 95
Query: 199 VRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG 258
+ ++ EYA+ +++++ + N V +++ + G+ + H
Sbjct: 96 IELKSVIHHNHRLHLIFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 259 FIHRDLKSDNLLISADKS-----IKIADFGVAR 286
+HRDLK NLL+S + +KI DFG+AR
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ +L H NI+R +V E GG + + + + R A + DV
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLS 117
Query: 250 GMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+AY H L HRDLK +N L S D +K+ DFG+A + M + GT +++P
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 177
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 29 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 83
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 143
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 144 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRW 198
Query: 303 WMAP 306
+ AP
Sbjct: 199 YRAP 202
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 14 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 68
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 129 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 142 AFAQGAFGKLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
QGAFG++ + N D +++ + EK LA+L H +VR+
Sbjct: 13 VLGQGAFGQVVKAR-NALDSRYYAIKKIRHTEEK----LSTILSEVXLLASLNHQYVVRY 67
Query: 202 IGA-------------CRKRMVWCIVTEYAKGGSVRQFLTRR---QNRAVPLKLAVKQAL 245
A +K+ I EY + ++ + Q R +L +Q L
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL-FRQIL 126
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ ++Y+H G IHR+LK N+ I +++KI DFG+A+
Sbjct: 127 E---ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
L LKH NIVR +V E+ + F + N + ++ + +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLK 112
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
G+ + H +HRDLK NLLI+ + +K+ADFG+AR
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 187
Query: 303 WMAP 306
+ AP
Sbjct: 188 YRAP 191
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDVARG 250
+L H ++V F G +V E + S+ + RR+ P + ++Q + G
Sbjct: 95 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 151
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
Y+H IHRDLK NL ++ D +KI DFG+A ++E E GT ++AP
Sbjct: 152 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 286
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 287 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDVARG 250
+L H ++V F G +V E + S+ + RR+ P + ++Q + G
Sbjct: 97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 153
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
Y+H IHRDLK NL ++ D +KI DFG+A ++E E GT ++AP
Sbjct: 154 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG+A R++ +T + GT ++AP
Sbjct: 176 QQGYIKVTDFGLAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI---EVQTEGMTPETGTYRW 303
+ RG+ Y+H +HRDLK NLL++ +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 143 FAQGAFGKLYR-----GTYNGEDVAIKILERP---ENNPEKAXXXXXXXXXXXXXLATLK 194
+G +GK+++ G G+ A+K+L++ N + A L +K
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI-----LEEVK 79
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H IV I A + ++ EY GG + F+ + A +++ + ++
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 306
H G I+RDLK +N++++ +K+ DFG+ + + +T GT +MAP
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ADFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 143 FAQGAFGKLYR-----GTYNGEDVAIKILERP---ENNPEKAXXXXXXXXXXXXXLATLK 194
+G +GK+++ G G+ A+K+L++ N + A L +K
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI-----LEEVK 79
Query: 195 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV 254
H IV I A + ++ EY GG + F+ + A +++ + ++
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 306
H G I+RDLK +N++++ +K+ DFG+ + + +T GT +MAP
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 153
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 154 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRWYRAP 191
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISA---DKSIKIADFGVARIEVQTEGMTP 296
AVKQ L+ +AY+H G +HRDLK +NLL + D +KIADFG+++I M
Sbjct: 153 AVKQILE---AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209
Query: 297 ETGTYRWMAP 306
GT + AP
Sbjct: 210 VCGTPGYCAP 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ADFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 147
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 148 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVP-LKLAVKQALDVARG 250
+L H ++V F G +V E + S+ + RR+ P + ++Q + G
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 127
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
Y+H IHRDLK NL ++ D +KI DFG+A ++E E GT ++AP
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 193
Query: 303 WMAP 306
+ AP
Sbjct: 194 YRAP 197
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 272
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 273 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 147
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 148 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 41 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 95
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 155
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 156 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 146
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 147 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+ R
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 213 IVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
IV E +GG + + + ++ + KL Q L + Y+H G IHRDLK +N+L+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHENGIIHRDLKPENVLL 147
Query: 272 SA---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
S+ D IKI DFG ++I +T M GT ++AP
Sbjct: 148 SSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 126
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ ++ E GT +M+P
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDEMANEFVGTRSYMSP 175
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAP 198
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 20 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 74
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 135 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 189
Query: 303 WMAP 306
+ AP
Sbjct: 190 YRAP 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAP 198
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
L+H NIVR + ++ +V + GG + + + R+ + ++Q L+ +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SI 141
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQ-TEGMTPETGTYRWMAP 306
AY H G +HR+LK +NLL+++ ++K+ADFG+A IEV +E GT +++P
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 199
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAP 198
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 38 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 92
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 153 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 41 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 95
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 155
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 156 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 193
Query: 303 WMAP 306
+ AP
Sbjct: 194 YRAP 197
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 29 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 83
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 143
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 144 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 198
Query: 303 WMAP 306
+ AP
Sbjct: 199 YRAP 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 241 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT 300
+ + VARGM ++ IHRDL + N+L+S + +KI DFG+AR + + T
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 301 ---YRWMAP 306
+WMAP
Sbjct: 262 RLPLKWMAP 270
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNG-------EDVAIKILERPENNPEKAX 177
YD +W +L +G + +GAFGK+ + + G VA+K+L+ E A
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK------EGAT 70
Query: 178 XXXXXXXXXXXXLATL--KHLNIVRFIGACRKR-MVWCIVTEYAKGGSVRQFLTRRQN 232
+ T HLN+V +GAC K+ ++ EY K G++ +L +++
Sbjct: 71 ASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
L+H NIVR + ++ +V + GG + + + R+ + ++Q L+ +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SI 118
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 306
AY H G +HR+LK +NLL+++ ++K+ADFG+A IEV +E GT +++P
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 176
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 191
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 37 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 91
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 151
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 152 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V +Y GG + L++ ++R +P ++A ++ + VH L ++HRD+K DN+L+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 273 ADKSIKIADFG--VARIEVQTEGMTPETGTYRWMAP 306
+ I++ADFG + +E T + GT +++P
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 196
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 203
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 30 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 84
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 145 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 199
Query: 303 WMAP 306
+ AP
Sbjct: 200 YRAP 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 188
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 30 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 84
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 145 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 199
Query: 303 WMAP 306
+ AP
Sbjct: 200 YRAP 203
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 188
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 191
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG-LGFIHRDLKSDNLL 270
C V EYA GG + L+R R A ++ + Y+H ++RDLK +NL+
Sbjct: 85 CFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 142
Query: 271 ISADKSIKIADFGVARIEVQTEG-MTPETGTYRWMAP 306
+ D IKI DFG+ + ++ M GT ++AP
Sbjct: 143 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 16 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 70
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 130
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T
Sbjct: 131 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRW 185
Query: 303 WMAP 306
+ AP
Sbjct: 186 YRAP 189
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG-LGFIHRDLKSDNLL 270
C V EYA GG + L+R R A ++ + Y+H ++RDLK +NL+
Sbjct: 84 CFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 141
Query: 271 ISADKSIKIADFGVARIEVQTEG-MTPETGTYRWMAP 306
+ D IKI DFG+ + ++ M GT ++AP
Sbjct: 142 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG-LGFIHRDLKSDNLL 270
C V EYA GG + L+R R A ++ + Y+H ++RDLK +NL+
Sbjct: 86 CFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 143
Query: 271 ISADKSIKIADFGVARIEVQTEG-MTPETGTYRWMAP 306
+ D IKI DFG+ + ++ M GT ++AP
Sbjct: 144 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 187
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
L+H NIVR + ++ +V + GG + + + R+ + ++Q L+ +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SI 117
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 306
AY H G +HR+LK +NLL+++ ++K+ADFG+A IEV +E GT +++P
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
L+H NIVR + ++ +V + GG + + + R+ + ++Q L+ +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SI 118
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 306
AY H G +HR+LK +NLL+++ ++K+ADFG+A IEV +E GT +++P
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 176
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ RG+ Y+H IHRDLK NL ++ D +KI DFG+AR + MT T + AP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAP 187
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFGKL--YRGTYNGEDVAIKILERPENNPEKAXXXX 180
G +N++ DL + +GA+G + R +G+ +A+K + N+ E+
Sbjct: 42 GNQNFEVKADDLEPI---MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM 98
Query: 181 XXXXXXXXXLATLKHLNIVRFIGAC-RKRMVW-CI-VTEYAKGGSVRQFLTRRQNRAVPL 237
+ T+ V F GA R+ VW C+ + + + +Q + + Q +P
Sbjct: 99 DLDIS----MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT--IPE 152
Query: 238 KLAVKQALDVARGMAYVHG-LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTP 296
+ K A+ + + + ++H L IHRD+K N+LI+A +K+ DFG++ V + T
Sbjct: 153 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
Query: 297 ETGTYRWMAP 306
+ G +MAP
Sbjct: 213 DAGCKPYMAP 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+G+ Y+H G IHRDLK NL ++ D +KI DFG+AR
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGM 251
LKH NIVR + + +V + GG + + R ++Q L+ +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---AV 116
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQ 290
+ H +G +HRDLK +NLL+++ ++K+ADFG+A IEVQ
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQ 157
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVA 248
L +KH NIV + +V + GG + + L R L ++Q L
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 249 RGMAYVHGLGFIHRDLKSDNLLI---SADKSIKIADFGVARIEVQTEGMTPETGTYRWMA 305
+ Y+H G +HRDLK +NLL + I I DFG++++E Q M+ GT ++A
Sbjct: 120 K---YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTPGYVA 175
Query: 306 P 306
P
Sbjct: 176 P 176
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 185
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R P A A + Y+H L I+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R P A A + Y+H L I+RDLK +NL+I
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
IK+ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG+A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGLAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 123
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 123
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 123
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 150
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 199
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R A P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 123
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ R +P ++ K ++ V +G+ Y+
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLREK 123
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + + GT +M+P
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
RG+ Y+H IHRDLK NLL++ + +KI DFG+AR
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI D+G+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
L LKH NIVR +V E+ + F + N + ++ + +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLK 112
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
G+ + H +HRDLK NLLI+ + +K+A+FG+AR
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EYA GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 198 IVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HG 256
IV F GA I E+ GGS+ Q L ++ +P ++ K ++ V +G+ Y+
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 257 LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+HRD+K N+L+++ IK+ DFGV+ + + GT +M+P
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSP 191
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
RG+ Y+H IHRDLK NLL++ + +KI DFG+AR
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 142 AFAQGAFGKL-YRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVR 200
GA G + YRG ++ DVA+K + PE + +H N++R
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRI-LPE-------CFSFADREVQLLRESDEHPNVIR 82
Query: 201 FIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFI 260
+ + R I E ++++++ ++ + L+ + G+A++H L +
Sbjct: 83 YFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNIV 140
Query: 261 HRDLKSDNLLIS---ADKSIK--IADFGVA-RIEVQTEGMTPET---GTYRWMAP 306
HRDLK N+LIS A IK I+DFG+ ++ V + + GT W+AP
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
I+ E +GG + + R ++A + A + D+ + ++H HRD+K +NLL +
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 273 A---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ D +K+ DFG A+ Q TP Y ++AP
Sbjct: 144 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAP 179
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
I+ E +GG + + R ++A + A + D+ + ++H HRD+K +NLL +
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 273 A---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ D +K+ DFG A+ Q TP Y ++AP
Sbjct: 163 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAP 198
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
LKH NIVR + + ++ + GG + + + R+ + ++Q L+ +
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---AV 134
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQTE 292
+ H +G +HRDLK +NLL+++ ++K+ADFG+A IEV+ E
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGE 177
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 127 YDEWTIDLRKLNMGTAFAQGAFGKLYRGTY--NGEDVAIKIL-ERPENNPEKAXXXXXXX 183
Y + +DL+ +G +G+F + + + + A+KI+ +R E N +K
Sbjct: 7 YQHYDLDLKDKPLG----EGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKE------- 55
Query: 184 XXXXXXLATLK----HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL 239
+ LK H NIV+ ++ +V E GG + + + ++++ +
Sbjct: 56 ------ITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS 109
Query: 240 AVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVARIE 288
+ + L ++++H +G +HRDLK +NLL + + IKI DFG AR++
Sbjct: 110 YIMRKL--VSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 200
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 161
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 162 QQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAP 193
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 162
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 163 EQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 194
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 17/184 (9%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
W + R N+ + GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 188 XXLATLKHLNIVRFIGA-----CRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L +KH N++ + + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR 302
Q L RG+ Y+H IHRDLK NL ++ D +KI DF +AR + MT T
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVATRW 187
Query: 303 WMAP 306
+ AP
Sbjct: 188 YRAP 191
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 197 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 32/160 (20%)
Query: 160 DVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAK 219
+ A+KI+++ + +P + L +H NI+ +VTE K
Sbjct: 49 EFAVKIIDKSKRDPTEEIEIL---------LRYGQHPNIITLKDVYDDGKYVYVVTELMK 99
Query: 220 GGSV------RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISA 273
GG + ++F + R+ AV + + + Y+H G +HRDLK N+L
Sbjct: 100 GGELLDKILRQKFFSEREASAV--------LFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 274 D----KSIKIADFGVARIEVQTEG---MTPETGTYRWMAP 306
+ +SI+I DFG A+ +++ E MTP T ++AP
Sbjct: 152 ESGNPESIRICDFGFAK-QLRAENGLLMTP-CYTANFVAP 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAP 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXX 186
++TID ++ +G FG +Y R N +A+K+L + + E
Sbjct: 10 KFTID--DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 187 XXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALD 246
+ L+H NI+R R ++ E+A G + + L ++ R + A +
Sbjct: 68 Q---SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME-E 122
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
+A + Y H IHRD+K +NLL+ +KIADFG
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAP 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 49/201 (24%)
Query: 142 AFAQGAFGKLYRGTYNGEDV--AIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIV 199
+G FG ++ +D AIK + P N E A LA L+H IV
Sbjct: 12 CLGRGGFGVVFEAKNKVDDCNYAIKRIRLP--NRELAREKVMREVKA---LAKLEHPGIV 66
Query: 200 RFIGACRKRMVWCIVTEYAKGGSVRQFL------TRRQN---------------RAVPLK 238
R+ A ++ TE + S + +L R++N R+V L
Sbjct: 67 RYFNAWLEKNT----TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 239 LAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG----M 294
+ L +A + ++H G +HRDLK N+ + D +K+ DFG+ Q E +
Sbjct: 123 IF----LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 295 TP---------ETGTYRWMAP 306
TP + GT +M+P
Sbjct: 179 TPMPAYARHTGQVGTKLYMSP 199
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 273 ADKSIKIADFGVARIEVQTEGMT-PETGTYRWMAP 306
I++ DFG A+ + +G T GT ++AP
Sbjct: 197 QQGYIQVTDFGFAK---RVKGATWTLCGTPEYLAP 228
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---XGTPEYLAP 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSV-RQFLTRRQNRAVPLKLAVKQALDVARGM 251
LKH NIVR + + +V + GG + + R ++Q L+ +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---SV 116
Query: 252 AYVHGLGFIHRDLKSDNLLISADK---SIKIADFGVARIEVQ 290
+ H G +HRDLK +NLL+++ ++K+ADFG+A IEVQ
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQ 157
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
G ++H G IHRDLK N L++ D S+KI DFG+AR
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 160 DVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAK 219
+ A+KI+++ + +P + L +H NI+ +VTE K
Sbjct: 49 EFAVKIIDKSKRDPTEEIEIL---------LRYGQHPNIITLKDVYDDGKYVYVVTELXK 99
Query: 220 GGSV------RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISA 273
GG + ++F + R+ AV + + + Y+H G +HRDLK N+L
Sbjct: 100 GGELLDKILRQKFFSEREASAV--------LFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 274 D----KSIKIADFGVAR 286
+ +SI+I DFG A+
Sbjct: 152 ESGNPESIRICDFGFAK 168
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
++ +Y GG + L++R+ R ++ + ++ + ++H LG I+RD+K +N+L+
Sbjct: 136 LILDYINGGELFTHLSQRE-RFTEHEVQIYVG-EIVLALEHLHKLGIIYRDIKLENILLD 193
Query: 273 ADKSIKIADFGVAR--IEVQTEGMTPETGTYRWMAP 306
++ + + DFG+++ + +TE GT +MAP
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 168
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 200
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
IV EY G Q L R + + +P+ A+ L++ ++Y+H +G ++ DLK +N++++
Sbjct: 161 IVMEYVGG----QSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
Query: 273 ADKSIKIADFG-VARI 287
++ +K+ D G V+RI
Sbjct: 217 -EEQLKLIDLGAVSRI 231
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
LKH NIVR + + +V + GG + + + R+ + ++Q L+ +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---SV 116
Query: 252 AYVHGLGFIHRDLKSDNLLISADK---SIKIADFGVARIEVQ 290
+ H G +HRDLK +NLL+++ ++K+ADFG+A IEVQ
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQ 157
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTE-YAKGGSVRQFLTRRQNRAVPLKLAVKQALDVA 248
L+ ++H NI++ + + + +V E + G + F+ R PL + + L A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
G Y+ IHRD+K +N++I+ D +IK+ DFG A + + GT + AP
Sbjct: 143 VG--YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAP 198
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 196
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 197 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 228
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R P A A + Y+H L I+RDLK +NLLI
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 170
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 171 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 202
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V +Y GG + L++ +++ +P +A ++ + +H L ++HRD+K DN+L+
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 225
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET---GTYRWMAP 306
+ I++ADFG +++ +G + GT +++P
Sbjct: 226 VNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISP 261
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 136 KLNMGTAFAQGAFGKLYRG--TYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
+L + A+G F +Y +G + A+K L E +A
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSG---- 84
Query: 194 KHLNIVRFIGACR--------KRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKL--AVKQ 243
H NIV+F A + + ++TE KG V +FL + ++R PL +K
Sbjct: 85 -HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLV-EFLKKMESRG-PLSCDTVLKI 141
Query: 244 ALDVARGMAYVH--GLGFIHRDLKSDNLLISADKSIKIADFGVA 285
R + ++H IHRDLK +NLL+S +IK+ DFG A
Sbjct: 142 FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPE 190
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
A L IV GA R+ I E +GGS+ Q + ++ +P A+
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALE 177
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKS-IKIADFGVARIEVQTEGMTPE--TGTY 301
G+ Y+H +H D+K+DN+L+S+D S + DFG A + +Q +G+ + TG Y
Sbjct: 178 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDY 231
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 23/172 (13%)
Query: 146 GAFGKLYRGTY-NGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFI-- 202
G+FG +++ ++VAIK K + +KH N+V
Sbjct: 51 GSFGVVFQAKLVESDEVAIK----------KVLQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 203 ----GACRKRMVWCIVTEYAKGG---SVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH 255
G + + +V EY + R + +Q +P+ L + R +AY+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ--TMPMLLIKLYMYQLLRSLAYIH 158
Query: 256 GLGFIHRDLKSDNLLISADKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 306
+G HRD+K NLL+ + K+ DFG A+I + E + + AP
Sbjct: 159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V +Y GG + L++ +++ +P +A ++ + +H L ++HRD+K DN+L+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 209
Query: 273 ADKSIKIADFG 283
+ I++ADFG
Sbjct: 210 VNGHIRLADFG 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
G ++H G IHRDLK N L++ D S+K+ DFG+AR
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NL+I
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID 175
Query: 273 ADKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
I++ DFG A R++ +T + GT ++AP
Sbjct: 176 QQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 190 LATLKHLNIVRFIGAC--RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
L L+H N+++ + ++ +V EY G +++ L + P+ A +
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
G+ Y+H G +H+D+K NLL++ ++KI+ GVA
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 151 LYRGTYNGEDVAIKILERPEN--NPEKAXXXXXXXXXXXXXLATLK-HLNIVRFIGACRK 207
++R T G + A+KI+E +PE+ L + H +I+ I +
Sbjct: 114 VHRAT--GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM----AYVHGLGFIHRD 263
+V + + G + +LT + + L+ K+ + R + +++H +HRD
Sbjct: 172 SSFMFLVFDLMRKGELFDYLTEK------VALSEKETRSIMRSLLEAVSFLHANNIVHRD 225
Query: 264 LKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
LK +N+L+ + I+++DFG + E + GT ++AP
Sbjct: 226 LKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP 268
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
LKH NIVR + + +V + GG + + + R+ + + Q L+ +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE---SV 143
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQTE 292
++H +HRDLK +NLL+++ ++K+ADFG+A IEVQ E
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGE 186
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI FG+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 221 GSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV-HGLGFIHRDLKSDNLLISADKSIKI 279
G+ + L +R +P ++ K + + + + Y+ G IHRD+K N+L+ IK+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 280 ADFGVARIEVQTEGMTPETGTYRWMAP 306
DFG++ V + G +MAP
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYMAP 193
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
A L IV GA R+ I E +GGS+ Q + ++ +P A+
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALE 196
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKS-IKIADFGVARIEVQTEGM 294
G+ Y+H +H D+K+DN+L+S+D S + DFG A + +Q +G+
Sbjct: 197 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGL 241
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 160
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 199 VRFIGAC-RKRMVW-CI-VTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH 255
V F GA R+ VW C+ + + + +Q + + Q +P + K A+ + + + ++H
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT--IPEDILGKIAVSIVKALEHLH 126
Query: 256 G-LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
L IHRD+K N+LI+A +K+ DFG++ V + G +MAP
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAP 178
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI D G+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 151
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 150
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 134 LRKLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLA 191
LRK + +GA+G +++ GE VA+K + N A
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 192 TLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL--KLAVKQALDVAR 249
+N++ + A R V+ +V +Y + R N P+ + V Q + V +
Sbjct: 68 HENIVNLLNVLRADNDRDVY-LVFDYMETD---LHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMT 295
Y+H G +HRD+K N+L++A+ +K+ADFG++R V +T
Sbjct: 124 ---YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 152
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 145
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 196
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 130 WTIDLRKLNMGTAFAQGAFGKLY--RGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXX 187
+TID +G +G FG +Y R + VA+K+L + + E
Sbjct: 20 FTID--DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 188 XXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDV 247
A L H NI+R R ++ EYA G + + L + + + L
Sbjct: 78 ---AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL-- 132
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG 283
A + Y HG IHRD+K +NLL+ +KIADFG
Sbjct: 133 ADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 133 DLRKLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXL 190
D+ KL +GA+ K+ NG++ A+KI+E+ +A L
Sbjct: 12 DMYKLT-SELLGEGAYAKVQGAVSLQNGKEYAVKIIEK------QAGHSRSRVFREVETL 64
Query: 191 ATLK-HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
+ + NI+ I + +V E +GGS+ + ++++ + A + DVA
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAA 122
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVAR--------IEVQTEGMTPET 298
+ ++H G HRDLK +N+L + + +KI DF + + T +T
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 299 GTYRWMAP 306
G+ +MAP
Sbjct: 183 GSAEYMAP 190
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKS--IKIADFGVARIEVQTE-----GMTPETG 299
+ + Y+H G HRD+K +N L S +KS IK+ DFG+++ + GMT + G
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 300 TYRWMAP 306
T ++AP
Sbjct: 237 TPYFVAP 243
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 190
Query: 268 NLLISADKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 306
NLL ++ + +K+ DFG A+ +T T ++AP
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR- 302
+ VA+GM ++ IHRDL + N+L+S +KI DFG+AR ++ + G R
Sbjct: 199 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 303 ---WMAP 306
WMAP
Sbjct: 258 PLKWMAP 264
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 69
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKR-MVWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 70 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127
Query: 237 LK 238
K
Sbjct: 128 YK 129
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR- 302
+ VA+GM ++ IHRDL + N+L+S +KI DFG+AR ++ + G R
Sbjct: 197 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 303 ---WMAP 306
WMAP
Sbjct: 256 PLKWMAP 262
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 127 YD--EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAX 177
YD +W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-- 67
Query: 178 XXXXXXXXXXXXLATLKHLNIVRFIGACRKR-MVWCIVTEYAKGGSVRQFLTRRQNRAVP 236
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP
Sbjct: 68 --RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 125
Query: 237 LK 238
K
Sbjct: 126 YK 127
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA-VPLKLAVKQALDVARGM 251
LKH NIVR + + ++ + GG + + + R+ + ++Q L+ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---AV 123
Query: 252 AYVHGLGFIHRDLKSDNLLISAD---KSIKIADFGVARIEVQTE 292
+ H +G +HR+LK +NLL+++ ++K+ADFG+A IEV+ E
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGE 166
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI D G+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR- 302
+ VA+GM ++ IHRDL + N+L+S +KI DFG+AR ++ + G R
Sbjct: 204 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 303 ---WMAP 306
WMAP
Sbjct: 263 PLKWMAP 269
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
Query: 129 EWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED-------VAIKILERPENNPEKAXXXXX 181
+W +L +G +GAFG++ G D VA+K+L+ + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 76
Query: 182 XXXXXXXXLATLKHLNIVRFIGACRKR-MVWCIVTEYAKGGSVRQFLTRRQNRAVPLK 238
+ HLN+V +GAC K ++ E+ K G++ +L ++N VP K
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
V E+ GG + +++R A A ++ + ++H G I+RDLK DN+L+
Sbjct: 101 FVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158
Query: 273 ADKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 306
+ K+ADFG+ + E G+T T GT ++AP
Sbjct: 159 HEGHCKLADFGMCK-EGICNGVTTATFCGTPDYIAP 193
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR- 302
+ VA+GM ++ IHRDL + N+L+S +KI DFG+AR ++ + G R
Sbjct: 206 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 303 ---WMAP 306
WMAP
Sbjct: 265 PLKWMAP 271
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 16/143 (11%)
Query: 104 ALNDDALAQALMDHRYPTEGLENYDEWTIDLRKLNMGTAFAQGAFGKLYRGTYNGED--- 160
A++ D L R P + +W +L +G +GAFG++ G D
Sbjct: 2 AMDPDELPLDEHCERLPYDA----SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTA 57
Query: 161 ----VAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGACRKR-MVWCIVT 215
VA+K+L+ + E + HLN+V +GAC K ++
Sbjct: 58 TCRTVAVKMLKEGATHSEH----RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 216 EYAKGGSVRQFLTRRQNRAVPLK 238
E+ K G++ +L ++N VP K
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYK 136
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
A L IV GA R+ I E +GGS+ Q + +Q +P A+ G
Sbjct: 119 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEG 176
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKS-IKIADFGVARIEVQTEGMTPE--TGTY 301
+ Y+H +H D+K+DN+L+S+D S + DFG A + +Q +G+ TG Y
Sbjct: 177 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDY 229
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V EY GG + L R + P A A + Y+H L I+RDLK +NLLI
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 175
Query: 273 ADKSIKIADFGVAR 286
I++ DFG A+
Sbjct: 176 QQGYIQVTDFGFAK 189
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 28/186 (15%)
Query: 137 LNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+G G FG+L G Y E VAIK+ P+ L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-----LHLEYRFYKQLGSGD 65
Query: 195 HLNIVRFIGACRKR--MVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMA 252
+ V + G C K MV ++ G + L +R LK + A+ + M
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL------GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 119
Query: 253 YVHGLGFIHRDLKSDNLLI-----SADKSIKIADFGVAR--IEVQTEGMTPE------TG 299
YVH I+RD+K +N LI + I I DFG+A+ I+ +T+ P TG
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTG 179
Query: 300 TYRWMA 305
T R+M+
Sbjct: 180 TARYMS 185
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAV-----KQALDV 247
LKH +IV + + +V E+ G + + +R + AV +Q L+
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVARIEVQTEGMTP--ETGTYR 302
R Y H IHRD+K +N+L+++ ++ +K+ DFGVA I++ G+ GT
Sbjct: 143 LR---YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPH 198
Query: 303 WMAP 306
+MAP
Sbjct: 199 FMAP 202
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLI-SADKSIKIADFGVARI 287
RG+ Y+H +HRDLK NL I + D +KI DFG+ARI
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVAR 249
A L IV GA R+ I E +GGS+ Q + +Q +P A+
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALE 161
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKS-IKIADFGVARIEVQTEGM 294
G+ Y+H +H D+K+DN+L+S+D S + DFG A + +Q +G+
Sbjct: 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGL 206
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 191 ATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARG 250
A L IV GA R+ I E +GGS+ Q + +Q +P A+ G
Sbjct: 121 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEG 178
Query: 251 MAYVHGLGFIHRDLKSDNLLISADKS-IKIADFGVARIEVQTEGM 294
+ Y+H +H D+K+DN+L+S+D S + DFG A + +Q +G+
Sbjct: 179 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGL 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
C+V GG ++ + P AV A ++ G+ +H ++RDLK +N+L+
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 272 SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
I+I+D G+A + + + GT +MAP
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+ RG+ Y+H IHRDLK NL ++ D +KI D G+AR
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
C+V GG ++ + P AV A ++ G+ +H ++RDLK +N+L+
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 272 SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
I+I+D G+A + + + GT +MAP
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL--TRRQNRAVPLKLAVKQALDV 247
LA + IV A + C+V GG +R + N A+ +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---TGTYRWM 304
G+ ++H I+RDLK +N+L+ D +++I+D G+A +E++ G T GT +M
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFM 356
Query: 305 AP 306
AP
Sbjct: 357 AP 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL--TRRQNRAVPLKLAVKQALDV 247
LA + IV A + C+V GG +R + N A+ +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---TGTYRWM 304
G+ ++H I+RDLK +N+L+ D +++I+D G+A +E++ G T GT +M
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFM 356
Query: 305 AP 306
AP
Sbjct: 357 AP 358
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL--TRRQNRAVPLKLAVKQALDV 247
LA + IV A + C+V GG +R + N A+ +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---TGTYRWM 304
G+ ++H I+RDLK +N+L+ D +++I+D G+A +E++ G T GT +M
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFM 356
Query: 305 AP 306
AP
Sbjct: 357 AP 358
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 213 IVTEYAKGGSVRQF------LTRRQNRAVPLKLAVKQALDVARGMAYVHG-LGFIHRDLK 265
I+ EY + S+ +F L + +P+++ V +Y+H HRD+K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 266 SDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
N+L+ + +K++DFG + V + + GTY +M P
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVD-KKIKGSRGTYEFMPP 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 190 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFL--TRRQNRAVPLKLAVKQALDV 247
LA + IV A + C+V GG +R + N A+ +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---TGTYRWM 304
G+ ++H I+RDLK +N+L+ D +++I+D G+A +E++ G T GT +M
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFM 356
Query: 305 AP 306
AP
Sbjct: 357 AP 358
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 198 IVRFIGAC-RKRMVW-CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYV- 254
IV+F GA R+ W C+ +++ + +P ++ K L + + ++
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 255 HGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
L IHRD+K N+L+ +IK+ DFG++ V + T + G +MAP
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
++ EYA GG + V ++ + G+ Y+H +H DLK N+L+S
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 273 ADK---SIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ IKI DFG++R + GT ++AP
Sbjct: 166 SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 123 GLENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXX 180
G+E + + ++ ++G G F K R G + A K +++ ++ +
Sbjct: 1 GMETFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCR 59
Query: 181 XXXXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA 240
L + H NI+ R ++ E GG + FL ++++ + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 241 -VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+KQ LD G+ Y+H H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLA 166
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
++G G F K R G + A K +++ ++ + L + H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 196 LNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYV 254
N++ R ++ E GG + FL ++++ + + +KQ LD G+ Y+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYL 131
Query: 255 HGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
H H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 132 HTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLA 166
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 245 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG----MTP---- 296
+ +A + ++H G +HRDLK N+ + D +K+ DFG+ Q E +TP
Sbjct: 171 IQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 297 -----ETGTYRWMAP 306
+ GT +M+P
Sbjct: 231 ATHXGQVGTKLYMSP 245
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 28/186 (15%)
Query: 137 LNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+G G FG+L G Y E VAIK+ P+ L +
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-----LHLEYRFYKQLGSGD 86
Query: 195 HLNIVRFIGACRKR--MVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMA 252
+ V + G C K MV ++ G + L +R LK + A+ + M
Sbjct: 87 GIPQVYYFGPCGKYNAMVLELL------GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 140
Query: 253 YVHGLGFIHRDLKSDNLLI-----SADKSIKIADFGVAR--IEVQTEGMTPE------TG 299
YVH I+RD+K +N LI + I I DF +A+ I+ +T+ P TG
Sbjct: 141 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG 200
Query: 300 TYRWMA 305
T R+M+
Sbjct: 201 TARYMS 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
++G G F K R G + A K +++ ++ + L + H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 196 LNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYV 254
N++ R ++ E GG + FL ++++ + + +KQ LD G+ Y+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYL 131
Query: 255 HGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
H H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 132 HTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLA 166
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
++G G F K R G + A K +++ ++ + L + H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 196 LNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYV 254
N++ R ++ E GG + FL ++++ + + +KQ LD G+ Y+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYL 131
Query: 255 HGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
H H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 132 HTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
++G G F K R G + A K +++ ++ + L + H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 196 LNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYV 254
N++ R ++ E GG + FL ++++ + + +KQ LD G+ Y+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYL 131
Query: 255 HGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
H H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 132 HTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLA 166
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V E +GGS+ + +R++ V Q DVA + ++H G HRDLK +N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ--DVASALDFLHNKGIAHRDLKPENILCE 145
Query: 273 ADKS---IKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
+KI DFG+ + T + G+ +MAP
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 28/186 (15%)
Query: 137 LNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLK 194
+G G FG+L G Y E VAIK+ P+ L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-----LHLEYRFYKQLGSGD 65
Query: 195 HLNIVRFIGACRKR--MVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMA 252
+ V + G C K MV ++ G + L +R LK + A+ + M
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL------GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 119
Query: 253 YVHGLGFIHRDLKSDNLLI-----SADKSIKIADFGVAR--IEVQTEGMTPE------TG 299
YVH I+RD+K +N LI + I I DF +A+ I+ +T+ P TG
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG 179
Query: 300 TYRWMA 305
T R+M+
Sbjct: 180 TARYMS 185
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 138 NMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKH 195
++G G F K R G + A K +++ ++ + L + H
Sbjct: 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 196 LNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYV 254
N++ R ++ E GG + FL ++++ + + +KQ LD G+ Y+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYL 131
Query: 255 HGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
H H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 132 HTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLA 166
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 232 NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI-----SADKSIKIADFGVAR 286
+R LK + A+ + M YVH I+RD+K +N LI + I I DFG+A+
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 287 --IEVQTEGMTPE------TGTYRWMA 305
I+ +T+ P TGT R+M+
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMS 177
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 213 IVTEYAKGGSVRQFLTRRQN-RAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI 271
+V + GG +R L + + + +KL + ++ + Y+ IHRD+K DN+L+
Sbjct: 92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFI---CELVMALDYLQNQRIIHRDMKPDNILL 148
Query: 272 SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+ I DF +A + + +T GT +MAP
Sbjct: 149 DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAP 183
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 139 MGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
MG G F + R G++ A K +++ + + L ++H
Sbjct: 16 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 197 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYVH 255
NI+ + ++ E GG + FL +++ +KQ LD G+ Y+H
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH 132
Query: 256 GLGFIHRDLKSDNLLISADKS-----IKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
H DLK +N+++ DK+ IK+ DFG+A +IE E GT ++AP
Sbjct: 133 SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAP 187
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 139 MGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
MG G F + R G++ A K +++ + + L ++H
Sbjct: 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 197 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYVH 255
NI+ + ++ E GG + FL +++ +KQ LD G+ Y+H
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH 125
Query: 256 GLGFIHRDLKSDNLLISADKS-----IKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
H DLK +N+++ DK+ IK+ DFG+A +IE E GT ++AP
Sbjct: 126 SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAP 180
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 249 RGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR 286
+G+ Y+H +HRDLK +NLL+ + +K+ADFG+A+
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--ALDVARGM 251
+H ++VR+ A + I EY GGS+ ++ K A + L V RG+
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 252 AYVHGLGFIHRDLKSDNLLIS 272
Y+H + +H D+K N+ IS
Sbjct: 125 RYIHSMSLVHMDIKPSNIFIS 145
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 199 VRFIGAC-RKRMVWCIVTEYAKGGSVRQFLTR--RQNRAVPLKLAVKQALDVARGMAYVH 255
V F GA R+ VW + S+ +F + + + +P + K A+ + + + ++H
Sbjct: 96 VTFYGALFREGDVW--ICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 256 G-LGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
L IHRD+K N+LI+A +K DFG++ V + G + AP
Sbjct: 154 SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAP 205
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--ALDVARGM 251
+H ++VR+ A + I EY GGS+ ++ K A + L V RG+
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 252 AYVHGLGFIHRDLKSDNLLIS 272
Y+H + +H D+K N+ IS
Sbjct: 129 RYIHSMSLVHMDIKPSNIFIS 149
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--ALDVARGM 251
+H ++VR+ A + I EY GGS+ ++ K A + L V RG+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 252 AYVHGLGFIHRDLKSDNLLIS 272
Y+H + +H D+K N+ IS
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQ--ALDVARGM 251
+H ++VR+ A + I EY GGS+ ++ K A + L V RG+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 252 AYVHGLGFIHRDLKSDNLLIS 272
Y+H + +H D+K N+ IS
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 131 TIDLR---KLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXX 185
+++LR + +G G+FG +Y GT GE+VAIK+ +P+
Sbjct: 2 SMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESK 56
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL 245
+ + +R+ GA V +V E G + L +R LK + A
Sbjct: 57 IYKMMQGGVGIPTIRWCGAEGDYNV--MVMELL--GPSLEDLFNFCSRKFSLKTVLLLAD 112
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVAR 286
+ + Y+H FIHRD+K DN L+ K + I DFG+A+
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 136 KLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
+ +G G+FG +Y GT GE+VAIK+ +P+ +
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAY 253
+ +R+ GA V +V E G + L +R LK + A + + Y
Sbjct: 63 VGIPTIRWCGAEGDYNV--MVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 254 VHGLGFIHRDLKSDNLLISADKS---IKIADFGVAR 286
+H FIHRD+K DN L+ K + I DFG+A+
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 208 RMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSD 267
R IV E GG + + R ++A + A + + + Y+H + HRD+K +
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 146
Query: 268 NLLISADKS---IKIADFGVAR 286
NLL ++ + +K+ DFG A+
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAK 168
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 139 MGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHL 196
MG G F + R G++ A K +++ + L ++H
Sbjct: 30 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 197 NIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLA-VKQALDVARGMAYVH 255
NI+ + ++ E GG + FL +++ +KQ LD G+ Y+H
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH 146
Query: 256 GLGFIHRDLKSDNLLISADKS-----IKIADFGVA-RIEVQTEGMTPETGTYRWMAP 306
H DLK +N+++ DK+ IK+ DFG+A +IE E GT ++AP
Sbjct: 147 SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAP 201
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 232 NRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLI-----SADKSIKIADFGVAR 286
+R LK + A+ + M YVH I+RD+K +N L+ +I I DFG+A+
Sbjct: 94 DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
Query: 287 --IEVQTEGMTPE------TGTYRWMA 305
I+ +T+ P TGT R+M+
Sbjct: 154 EYIDPETKKHIPYREHKSLTGTARYMS 180
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 6 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 164
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 6 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 164
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 131 TIDLR---KLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXX 185
+++LR K +G G+FG +Y G +GE+VAIK+ +P+
Sbjct: 2 SMELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMM 61
Query: 186 XXXXLATLKHLNIVRFIGACRKRMVWC--------IVTEYAKGGSVRQFLTRRQNRAVPL 237
G + WC +V E G + L +R L
Sbjct: 62 QG---------------GVGIPSIKWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSL 104
Query: 238 KLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVAR 286
K + A + + Y+H FIHRD+K DN L+ K + I DFG+A+
Sbjct: 105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 16/168 (9%)
Query: 125 ENYDEWTIDLRKLNMGTAFAQGAFG--KLYRGTYNGEDVAIKILERPENNPEKAXXXXXX 182
EN D++ + G G F K R G A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 183 XXXXXXXLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVK 242
L ++H N++ + ++ E GG + FL ++ ++ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 243 QALDVARGMAYVHGLGFIHRDLKSDNLLISADKS-----IKIADFGVA 285
+ G+ Y+H L H DLK +N+++ D++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLA 165
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 213 IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS 272
+V E +GGS+ + +R++ V Q DVA + ++H G HRDLK +N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ--DVASALDFLHNKGIAHRDLKPENILCE 145
Query: 273 ADKS---IKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 306
+KI DF + + T + G+ +MAP
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)
Query: 136 KLNMGTAFAQGAFGKLYRGT--YNGEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATL 193
K +G G+FG++Y GT E+VAIK+ +P+ L
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-----LLYESKIYRILQGG 62
Query: 194 KHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGM-- 251
+ VR+ G V + + F +R KL++K L +A M
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSR--------KLSLKTVLMLADQMIN 114
Query: 252 --AYVHGLGFIHRDLKSDNLLISADK---SIKIADFGVAR 286
+VH F+HRD+K DN L+ + + I DFG+A+
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 20/79 (25%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLIS------ADKS-------IKIADFGVAR------I 287
+A G+A++H L IHRDLK N+L+S AD+ I I+DFG+ +
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 288 EVQTEGMTPETGTYRWMAP 306
+T P +GT W AP
Sbjct: 184 SFRTNLNNP-SGTSGWRAP 201
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 34/176 (19%)
Query: 146 GAFGKLYRGTYNGEDV--AIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
G++ + R + ++ A+K++++ + +P + L +H NI+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL---------LRYGQHPNIITLKD 88
Query: 204 ACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+VTE +GG + ++F + R+ V + + + Y+H
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV--------LHTIGKTVEYLHSQ 140
Query: 258 GFIHRDLKSDNLLISAD----KSIKIADFGVARIEVQTEG---MTPETGTYRWMAP 306
G +HRDLK N+L + + ++I DFG A+ +++ E MTP T ++AP
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTP-CYTANFVAP 194
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 145 QGAFG--KLYRGTYNGEDVAIK-ILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRF 201
QG FG +L + G VAIK +++ P LA L H NIV+
Sbjct: 33 QGTFGTVQLGKEKSTGMSVAIKKVIQDPR--------FRNRELQIMQDLAVLHHPNIVQL 84
Query: 202 ------IGACRKRMVWC-IVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQAL-DVARGMAY 253
+G +R ++ +V EY R + + P + +K L + R +
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 254 VH--GLGFIHRDLKSDNLLIS-ADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+H + HRD+K N+L++ AD ++K+ DFG A+ +E + + AP
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 46/194 (23%)
Query: 142 AFAQGAFGKLYRGTYN---GEDVAIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNI 198
+GAFGK+ + G VA+KI++ + E A + L+HLN
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE----------IQVLEHLNT 70
Query: 199 V--RFIGACRKRMVW-------CIVTEYAKGGSVRQFLTRRQNRAVPLKL--AVKQALDV 247
C + + W CIV E G S F+ ++N +P +L K A +
Sbjct: 71 TDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFI--KENGFLPFRLDHIRKMAYQI 127
Query: 248 ARGMAYVHGLGFIHRDLKSDNLL-ISADKS------------------IKIADFGVARIE 288
+ + ++H H DLK +N+L + +D + IK+ DFG A +
Sbjct: 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYD 187
Query: 289 VQTEGMTPETGTYR 302
+ T YR
Sbjct: 188 DEHHSTLVSTRHYR 201
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRW 303
G+ +H G +HRDL N+L++ + I I DF +AR E + T+RW
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRW 198
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 250 GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRW 303
G+ +H G +HRDL N+L++ + I I DF +AR E + T+RW
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRW 198
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLIS------ADKS-------IKIADFGVARIEVQTE- 292
+A G+A++H L IHRDLK N+L+S AD+ I I+DFG+ + +
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 293 ----GMTPETGTYRWMAP 306
+ +GT W AP
Sbjct: 202 XFRXNLNNPSGTSGWRAP 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 17/168 (10%)
Query: 147 AFGKLYRGTYNGEDVAIK-ILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIGAC 205
++ L G ++G A+K IL + + E+A H NI+R + C
Sbjct: 43 SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR-------LFNHPNILRLVAYC 95
Query: 206 -----RKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPL--KLAVKQALDVARGMAYVHGLG 258
K W ++ + K G++ + R +++ L + L + RG+ +H G
Sbjct: 96 LRERGAKHEAW-LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 259 FIHRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMA 305
+ HRDLK N+L+ + + D G + + + EG W A
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLIS------ADKS-------IKIADFGVARIEVQTE- 292
+A G+A++H L IHRDLK N+L+S AD+ I I+DFG+ + +
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 293 ----GMTPETGTYRWMAP 306
+ +GT W AP
Sbjct: 184 XFRXNLNNPSGTSGWRAP 201
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 34/176 (19%)
Query: 146 GAFGKLYRGTYNGEDV--AIKILERPENNPEKAXXXXXXXXXXXXXLATLKHLNIVRFIG 203
G++ + R + ++ A+K++++ + +P + L +H NI+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL---------LRYGQHPNIITLKD 88
Query: 204 ACRKRMVWCIVTEYAKGGSV------RQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGL 257
+VTE +GG + ++F + R+ V + + + Y+H
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV--------LHTIGKTVEYLHSQ 140
Query: 258 GFIHRDLKSDNLLISAD----KSIKIADFGVARIEVQTEG---MTPETGTYRWMAP 306
G +HRDLK N+L + + ++I DFG A+ +++ E MTP T ++AP
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTP-CYTANFVAP 194
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 247 VARGMAYVHGLGFIHRDLKSDNLLIS------ADKS-------IKIADFGVARIEVQTE- 292
+A G+A++H L IHRDLK N+L+S AD+ I I+DFG+ + +
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 293 ----GMTPETGTYRWMAP 306
+ +GT W AP
Sbjct: 202 XFRXNLNNPSGTSGWRAP 219
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 190 LATLKHLNIV---RFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRA--VPLKLA---V 241
L LKH N++ + + R VW ++ +YA+ R ++A P++L V
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVW-LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMV 130
Query: 242 KQAL-DVARGMAYVHGLGFIHRDLKSDNLLISADKS----IKIADFGVARI 287
K L + G+ Y+H +HRDLK N+L+ + +KIAD G AR+
Sbjct: 131 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 246 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTP-ETGTYRWM 304
D +A++H G +H D+K N+ + K+ DFG+ +E+ T G + G R+M
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYM 223
Query: 305 AP 306
AP
Sbjct: 224 AP 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAV-----KQALDV 247
LKH +IV + + +V E+ G + + +R + AV +Q L+
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVARIEVQTEGMTP--ETGTYR 302
R Y H IHRD+K +L+++ ++ +K+ FGVA I++ G+ GT
Sbjct: 145 LR---YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPH 200
Query: 303 WMAP 306
+MAP
Sbjct: 201 FMAP 204
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 212 CIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH-GLGFIHRDLKSDNLL 270
C+V E G + +++ + + +PL K V +G+ Y+H IH D+K +N+L
Sbjct: 105 CMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL 163
Query: 271 ISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 306
+S ++ I E Q G P +G+ AP
Sbjct: 164 LSVNEQY-IRRLAAEATEWQRSGAPPPSGSAVSTAP 198
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 193 LKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAV-----KQALDV 247
LKH +IV + + +V E+ G + + +R + AV +Q L+
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 248 ARGMAYVHGLGFIHRDLKSDNLLISADKS---IKIADFGVARIEVQTEGMTP--ETGTYR 302
R Y H IHRD+K +L+++ ++ +K+ FGVA I++ G+ GT
Sbjct: 143 LR---YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPH 198
Query: 303 WMAP 306
+MAP
Sbjct: 199 FMAP 202
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,911,030
Number of Sequences: 62578
Number of extensions: 279291
Number of successful extensions: 2315
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 611
Number of HSP's gapped (non-prelim): 1141
length of query: 306
length of database: 14,973,337
effective HSP length: 98
effective length of query: 208
effective length of database: 8,840,693
effective search space: 1838864144
effective search space used: 1838864144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)