Query 021898
Match_columns 306
No_of_seqs 225 out of 2099
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 06:30:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021898.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021898hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 3.4E-83 7.3E-88 552.8 19.7 301 6-306 2-303 (303)
2 KOG0373 Serine/threonine speci 100.0 1.2E-75 2.6E-80 498.9 20.0 303 4-306 3-306 (306)
3 PTZ00239 serine/threonine prot 100.0 5.9E-73 1.3E-77 521.1 32.0 301 6-306 2-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.8E-72 3.9E-77 515.0 30.2 284 7-290 2-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 1.1E-71 2.3E-76 515.1 31.6 284 3-287 3-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 2.7E-71 5.7E-76 511.7 30.3 294 6-300 10-313 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 4.8E-70 1E-74 503.7 31.2 286 6-293 2-301 (305)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 6.7E-70 1.5E-74 503.9 29.2 290 3-293 12-308 (316)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6.7E-70 1.4E-74 499.8 28.3 282 7-289 2-292 (293)
10 PTZ00244 serine/threonine-prot 100.0 1.9E-69 4.1E-74 496.3 29.0 282 6-288 3-293 (294)
11 KOG0371 Serine/threonine prote 100.0 6.7E-71 1.5E-75 479.3 16.1 302 5-306 18-319 (319)
12 KOG0374 Serine/threonine speci 100.0 2E-69 4.3E-74 500.9 25.1 286 4-289 6-303 (331)
13 smart00156 PP2Ac Protein phosp 100.0 1.3E-67 2.8E-72 480.9 29.4 269 20-289 1-270 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 7.5E-66 1.6E-70 482.9 31.6 290 3-292 8-370 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 4.8E-65 1E-69 472.2 29.1 271 18-288 19-311 (311)
16 KOG0375 Serine-threonine phosp 100.0 1.1E-62 2.4E-67 444.6 14.4 287 5-293 46-346 (517)
17 KOG0377 Protein serine/threoni 100.0 6.9E-54 1.5E-58 395.7 13.4 287 3-290 117-433 (631)
18 KOG0376 Serine-threonine phosp 100.0 2.5E-47 5.5E-52 359.0 14.4 290 3-293 166-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.1E-35 2.4E-40 263.6 22.0 214 50-274 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 9.9E-28 2.2E-32 216.1 18.9 193 47-280 1-227 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 8.5E-28 1.9E-32 211.4 14.7 178 50-261 1-198 (208)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 4.7E-26 1E-30 202.3 17.8 116 50-168 2-143 (222)
23 PRK00166 apaH diadenosine tetr 99.9 8.2E-26 1.8E-30 206.2 18.9 219 47-278 1-261 (275)
24 cd07423 MPP_PrpE Bacillus subt 99.9 9E-26 1.9E-30 202.1 18.2 202 47-279 1-223 (234)
25 cd07421 MPP_Rhilphs Rhilph pho 99.9 9.1E-25 2E-29 198.2 18.5 188 48-263 3-282 (304)
26 PHA02239 putative protein phos 99.9 7.2E-25 1.6E-29 195.9 16.4 175 47-262 1-221 (235)
27 PRK11439 pphA serine/threonine 99.9 9.3E-25 2E-29 193.5 16.4 178 47-262 17-208 (218)
28 cd07422 MPP_ApaH Escherichia c 99.9 5.1E-25 1.1E-29 199.0 12.8 123 49-175 1-129 (257)
29 TIGR00668 apaH bis(5'-nucleosy 99.9 6.7E-25 1.4E-29 198.8 11.9 123 48-174 2-130 (279)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.3E-23 4.9E-28 183.2 19.3 181 47-260 1-195 (207)
31 PRK09968 serine/threonine-spec 99.9 2.5E-22 5.4E-27 178.0 14.2 116 47-168 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 4.3E-13 9.3E-18 110.1 12.4 159 48-241 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.4 9.3E-12 2E-16 103.9 16.2 59 48-118 1-59 (155)
34 PRK09453 phosphodiesterase; Pr 99.4 1.5E-11 3.2E-16 105.9 16.2 69 47-119 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.4 2.3E-11 5.1E-16 102.2 14.7 62 47-117 1-63 (158)
36 PF12850 Metallophos_2: Calcin 99.3 3.6E-11 7.8E-16 99.8 13.5 124 47-245 1-124 (156)
37 cd07379 MPP_239FB Homo sapiens 99.2 7.4E-11 1.6E-15 96.5 10.7 118 48-246 1-120 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.2 1.3E-10 2.9E-15 103.7 12.8 158 48-242 2-208 (238)
39 cd07388 MPP_Tt1561 Thermus the 99.2 3.5E-09 7.6E-14 94.1 18.9 71 47-118 5-75 (224)
40 cd07392 MPP_PAE1087 Pyrobaculu 99.1 1.8E-09 3.9E-14 92.3 12.3 65 49-119 1-66 (188)
41 cd07394 MPP_Vps29 Homo sapiens 99.1 1.2E-08 2.7E-13 87.6 17.0 59 48-118 1-65 (178)
42 cd00838 MPP_superfamily metall 98.9 1.1E-08 2.4E-13 81.0 10.8 117 50-246 1-119 (131)
43 PRK05340 UDP-2,3-diacylglucosa 98.9 3E-08 6.5E-13 89.1 14.5 211 47-286 1-238 (241)
44 cd07404 MPP_MS158 Microscilla 98.9 4.2E-09 9.2E-14 89.0 7.9 67 49-118 1-68 (166)
45 cd07399 MPP_YvnB Bacillus subt 98.9 5.4E-08 1.2E-12 86.0 15.1 193 48-288 2-213 (214)
46 COG0639 ApaH Diadenosine tetra 98.9 7E-09 1.5E-13 84.4 7.8 143 120-263 3-154 (155)
47 COG2129 Predicted phosphoester 98.9 1.4E-07 3E-12 82.7 16.0 192 46-286 3-224 (226)
48 cd07403 MPP_TTHA0053 Thermus t 98.8 4.8E-08 1E-12 79.5 10.7 107 50-246 1-107 (129)
49 cd07400 MPP_YydB Bacillus subt 98.8 1.2E-07 2.6E-12 77.9 12.3 117 49-246 1-129 (144)
50 TIGR01854 lipid_A_lpxH UDP-2,3 98.7 2E-08 4.4E-13 89.7 7.2 207 49-279 1-230 (231)
51 TIGR03729 acc_ester putative p 98.7 1.7E-07 3.8E-12 84.0 10.8 68 48-118 1-74 (239)
52 COG0622 Predicted phosphoester 98.7 1.7E-06 3.6E-11 73.9 15.9 160 47-290 2-167 (172)
53 cd07395 MPP_CSTP1 Homo sapiens 98.6 4.3E-06 9.3E-11 75.8 19.3 71 48-118 6-99 (262)
54 PRK11340 phosphodiesterase Yae 98.6 3E-07 6.4E-12 84.2 10.8 70 47-118 50-125 (271)
55 cd07402 MPP_GpdQ Enterobacter 98.6 6.7E-07 1.4E-11 79.7 12.6 67 48-118 1-83 (240)
56 PRK11148 cyclic 3',5'-adenosin 98.5 1.6E-05 3.5E-10 72.8 19.5 70 47-118 15-98 (275)
57 cd07396 MPP_Nbla03831 Homo sap 98.5 5.3E-06 1.2E-10 75.7 15.7 73 48-120 2-88 (267)
58 cd07393 MPP_DR1119 Deinococcus 98.4 2.8E-06 6E-11 76.0 11.8 65 49-117 1-83 (232)
59 cd07383 MPP_Dcr2 Saccharomyces 98.4 6.6E-06 1.4E-10 71.6 12.7 70 47-116 3-87 (199)
60 cd07385 MPP_YkuE_C Bacillus su 98.4 7E-07 1.5E-11 78.7 6.5 70 47-118 2-76 (223)
61 PRK04036 DNA polymerase II sma 98.2 1.3E-05 2.8E-10 79.7 12.5 73 46-120 243-345 (504)
62 COG2908 Uncharacterized protei 98.2 7.9E-06 1.7E-10 72.4 8.9 198 50-280 1-229 (237)
63 cd07398 MPP_YbbF-LpxH Escheric 98.2 2.3E-06 4.9E-11 75.1 5.4 29 218-246 177-205 (217)
64 cd07401 MPP_TMEM62_N Homo sapi 98.1 3.3E-05 7.2E-10 70.1 12.0 71 49-119 2-90 (256)
65 PF06874 FBPase_2: Firmicute f 98.1 3.3E-05 7E-10 76.7 12.1 44 73-121 184-227 (640)
66 PF14582 Metallophos_3: Metall 98.1 3.9E-05 8.4E-10 67.5 10.4 75 46-120 5-104 (255)
67 COG1409 Icc Predicted phosphoh 98.0 0.00016 3.4E-09 65.8 14.8 72 48-121 2-81 (301)
68 cd08165 MPP_MPPE1 human MPPE1 98.0 5.6E-05 1.2E-09 63.5 10.4 48 71-118 36-89 (156)
69 TIGR00619 sbcd exonuclease Sbc 98.0 1.5E-05 3.2E-10 72.3 7.2 72 47-118 1-88 (253)
70 cd07391 MPP_PF1019 Pyrococcus 97.9 4.1E-05 8.9E-10 65.2 8.1 56 62-118 30-88 (172)
71 cd00839 MPP_PAPs purple acid p 97.9 5.2E-05 1.1E-09 69.7 9.1 70 47-120 5-83 (294)
72 PHA02546 47 endonuclease subun 97.9 3.1E-05 6.7E-10 73.2 7.0 72 47-118 1-89 (340)
73 cd00840 MPP_Mre11_N Mre11 nucl 97.9 3.3E-05 7.2E-10 67.6 6.7 73 48-120 1-91 (223)
74 cd07390 MPP_AQ1575 Aquifex aeo 97.8 4.4E-05 9.4E-10 64.8 6.8 67 49-120 1-84 (168)
75 TIGR00024 SbcD_rel_arch putati 97.7 0.00011 2.3E-09 65.6 7.5 69 47-119 15-103 (225)
76 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 8.3E-05 1.8E-09 67.7 6.8 70 49-118 1-86 (262)
77 TIGR00583 mre11 DNA repair pro 97.6 0.00019 4.1E-09 69.3 7.7 73 47-119 4-124 (405)
78 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00057 1.2E-08 57.0 9.3 119 50-241 1-121 (150)
79 cd08166 MPP_Cdc1_like_1 unchar 97.4 0.0019 4.1E-08 56.2 11.1 49 70-118 39-93 (195)
80 PRK10966 exonuclease subunit S 97.4 0.00029 6.3E-09 68.2 6.6 72 47-119 1-88 (407)
81 cd08163 MPP_Cdc1 Saccharomyces 97.4 0.0079 1.7E-07 54.7 15.6 43 206-250 188-234 (257)
82 COG1408 Predicted phosphohydro 97.3 0.00046 1E-08 63.6 6.2 72 47-120 45-120 (284)
83 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00041 8.9E-09 62.3 5.7 68 50-119 2-95 (243)
84 COG4186 Predicted phosphoester 97.2 0.0012 2.6E-08 54.9 6.5 66 49-118 6-86 (186)
85 COG3855 Fbp Uncharacterized pr 97.1 0.005 1.1E-07 59.3 10.5 42 74-120 191-232 (648)
86 PF08321 PPP5: PPP5 TPR repeat 97.0 0.0016 3.5E-08 50.0 5.5 44 2-45 52-95 (95)
87 cd07384 MPP_Cdc1_like Saccharo 97.0 0.0016 3.5E-08 55.4 5.9 52 68-119 40-101 (171)
88 KOG3325 Membrane coat complex 96.9 0.017 3.8E-07 47.6 11.2 120 49-253 3-128 (183)
89 COG0420 SbcD DNA repair exonuc 96.8 0.0032 7E-08 60.5 7.4 74 47-120 1-90 (390)
90 cd00845 MPP_UshA_N_like Escher 96.8 0.0025 5.5E-08 57.2 6.3 66 48-118 2-82 (252)
91 cd00842 MPP_ASMase acid sphing 96.8 0.018 4E-07 53.0 11.6 72 49-120 40-124 (296)
92 COG1407 Predicted ICC-like pho 96.3 0.014 3E-07 52.0 7.4 71 46-119 19-111 (235)
93 PLN02533 probable purple acid 96.3 0.0062 1.3E-07 59.4 5.2 71 46-119 139-212 (427)
94 COG1311 HYS2 Archaeal DNA poly 96.2 0.067 1.4E-06 52.2 11.9 213 48-288 227-472 (481)
95 cd07410 MPP_CpdB_N Escherichia 96.2 0.0088 1.9E-07 54.7 5.7 66 48-118 2-95 (277)
96 KOG0376 Serine-threonine phosp 96.1 0.0023 5E-08 61.9 1.4 114 19-134 14-132 (476)
97 cd08164 MPP_Ted1 Saccharomyces 96.1 0.016 3.5E-07 50.3 6.3 64 54-117 24-110 (193)
98 cd07378 MPP_ACP5 Homo sapiens 95.7 0.026 5.7E-07 51.3 6.4 69 48-118 2-83 (277)
99 cd07408 MPP_SA0022_N Staphyloc 95.3 0.037 8E-07 50.1 6.0 66 48-118 2-82 (257)
100 cd07412 MPP_YhcR_N Bacillus su 94.9 0.035 7.6E-07 51.2 4.6 66 48-118 2-88 (288)
101 COG1768 Predicted phosphohydro 94.9 0.059 1.3E-06 46.1 5.3 44 72-119 42-87 (230)
102 KOG3662 Cell division control 94.0 0.12 2.7E-06 49.7 6.0 71 47-117 49-143 (410)
103 cd07411 MPP_SoxB_N Thermus the 93.8 0.11 2.3E-06 47.3 5.2 64 49-118 3-95 (264)
104 KOG2863 RNA lariat debranching 93.2 0.28 6E-06 46.3 6.8 74 47-120 1-90 (456)
105 cd07409 MPP_CD73_N CD73 ecto-5 93.2 0.25 5.5E-06 45.3 6.6 66 48-118 2-94 (281)
106 cd07387 MPP_PolD2_C PolD2 (DNA 92.6 5.9 0.00013 36.0 14.4 50 232-286 205-257 (257)
107 cd07406 MPP_CG11883_N Drosophi 91.8 0.37 8E-06 43.6 5.7 64 49-117 3-82 (257)
108 PRK09419 bifunctional 2',3'-cy 91.7 0.26 5.7E-06 54.1 5.5 65 48-117 662-735 (1163)
109 TIGR00282 metallophosphoestera 91.6 0.5 1.1E-05 43.2 6.4 67 47-118 1-71 (266)
110 KOG1432 Predicted DNA repair e 91.5 0.57 1.2E-05 44.0 6.6 71 48-119 55-148 (379)
111 PF04042 DNA_pol_E_B: DNA poly 89.5 0.53 1.1E-05 40.9 4.4 72 49-120 1-93 (209)
112 KOG2476 Uncharacterized conser 89.2 0.94 2E-05 44.1 6.1 69 46-115 5-75 (528)
113 cd07405 MPP_UshA_N Escherichia 88.7 0.59 1.3E-05 43.0 4.4 66 48-118 2-87 (285)
114 cd07382 MPP_DR1281 Deinococcus 88.4 1.5 3.3E-05 39.8 6.7 66 48-118 1-70 (255)
115 KOG1378 Purple acid phosphatas 88.0 3.9 8.5E-05 40.0 9.5 209 46-279 147-379 (452)
116 KOG3339 Predicted glycosyltran 86.8 6.2 0.00014 34.0 8.9 85 75-165 40-140 (211)
117 cd07407 MPP_YHR202W_N Saccharo 85.3 1.3 2.8E-05 40.8 4.7 66 48-118 7-97 (282)
118 COG0737 UshA 5'-nucleotidase/2 85.2 1.2 2.6E-05 44.5 4.7 67 47-118 27-115 (517)
119 cd08162 MPP_PhoA_N Synechococc 84.5 1.7 3.7E-05 40.6 5.1 64 49-117 3-90 (313)
120 PTZ00422 glideosome-associated 83.3 2.4 5.3E-05 40.9 5.6 72 47-118 27-109 (394)
121 TIGR01390 CycNucDiestase 2',3' 82.4 2.1 4.5E-05 44.0 5.1 65 48-117 4-98 (626)
122 KOG0918 Selenium-binding prote 82.0 0.083 1.8E-06 50.3 -4.7 96 72-173 46-144 (476)
123 PRK09420 cpdB bifunctional 2', 82.0 2.3 4.9E-05 43.9 5.2 67 46-117 25-121 (649)
124 PRK09419 bifunctional 2',3'-cy 81.7 2.1 4.6E-05 47.2 5.1 66 47-117 42-138 (1163)
125 PRK09558 ushA bifunctional UDP 79.7 2.7 5.9E-05 42.4 4.9 67 47-118 35-121 (551)
126 KOG2310 DNA repair exonuclease 78.3 7.2 0.00016 39.0 7.0 54 47-100 14-79 (646)
127 PRK11907 bifunctional 2',3'-cy 76.6 4.4 9.6E-05 42.8 5.4 66 47-117 116-212 (814)
128 KOG3947 Phosphoesterases [Gene 75.9 3.5 7.7E-05 37.7 3.9 66 47-120 62-128 (305)
129 TIGR01530 nadN NAD pyrophospha 73.6 6.9 0.00015 39.6 5.8 65 49-118 3-94 (550)
130 KOG2679 Purple (tartrate-resis 72.1 4.7 0.0001 36.9 3.7 71 47-118 44-126 (336)
131 PTZ00235 DNA polymerase epsilo 71.8 19 0.00041 33.4 7.6 72 47-118 28-122 (291)
132 PF13258 DUF4049: Domain of un 67.5 6.7 0.00015 35.1 3.6 88 75-169 86-186 (318)
133 PRK09418 bifunctional 2',3'-cy 65.2 10 0.00022 40.0 5.1 67 46-117 39-141 (780)
134 PF02875 Mur_ligase_C: Mur lig 59.1 24 0.00052 26.1 4.9 72 43-114 8-81 (91)
135 PF06874 FBPase_2: Firmicute f 57.0 7.7 0.00017 39.4 2.3 41 218-258 507-554 (640)
136 PRK10773 murF UDP-N-acetylmura 48.5 64 0.0014 31.6 7.3 67 46-113 324-392 (453)
137 PF12641 Flavodoxin_3: Flavodo 45.4 1.2E+02 0.0026 25.4 7.4 52 50-101 2-66 (160)
138 KOG3425 Uncharacterized conser 45.1 72 0.0016 25.6 5.6 60 59-118 12-79 (128)
139 KOG3770 Acid sphingomyelinase 40.9 65 0.0014 32.7 5.9 61 62-122 197-267 (577)
140 TIGR00282 metallophosphoestera 36.3 26 0.00057 32.0 2.3 39 76-118 2-41 (266)
141 PLN02965 Probable pheophorbida 35.6 1.3E+02 0.0029 26.2 6.8 21 220-240 59-81 (255)
142 smart00854 PGA_cap Bacterial c 35.6 59 0.0013 28.8 4.4 29 229-259 204-232 (239)
143 TIGR01143 murF UDP-N-acetylmur 34.9 1.7E+02 0.0037 28.1 7.8 94 20-115 271-365 (417)
144 cd07382 MPP_DR1281 Deinococcus 32.1 46 0.001 30.1 3.1 39 76-117 1-39 (255)
145 PF12085 DUF3562: Protein of u 30.6 1E+02 0.0022 22.0 3.9 43 2-44 1-43 (66)
146 PF10083 DUF2321: Uncharacteri 29.4 16 0.00035 30.5 -0.3 45 218-268 23-76 (158)
147 COG3855 Fbp Uncharacterized pr 28.3 25 0.00055 34.6 0.8 56 219-274 515-579 (648)
148 cd07381 MPP_CapA CapA and rela 28.2 75 0.0016 28.0 3.8 30 228-259 205-234 (239)
149 PRK02135 hypothetical protein; 27.5 2.5E+02 0.0053 24.6 6.7 19 49-67 149-167 (201)
150 PRK14093 UDP-N-acetylmuramoyla 27.4 2.6E+02 0.0056 27.6 7.8 66 47-113 337-408 (479)
151 TIGR00550 nadA quinolinate syn 26.7 1.2E+02 0.0027 28.3 5.0 60 21-84 2-63 (310)
152 COG4320 Uncharacterized protei 25.8 1.5E+02 0.0033 28.0 5.3 61 34-102 44-108 (410)
153 PF02609 Exonuc_VII_S: Exonucl 24.6 2.2E+02 0.0047 18.9 4.7 34 5-39 6-39 (53)
154 TIGR00024 SbcD_rel_arch putati 24.1 1.9E+02 0.0042 25.5 5.6 62 16-86 34-101 (225)
155 PF04839 PSRP-3_Ycf65: Plastid 24.1 2.3E+02 0.0049 18.9 4.7 35 3-37 9-43 (49)
156 TIGR01428 HAD_type_II 2-haloal 24.0 4.2E+02 0.0092 22.0 9.5 67 47-116 109-175 (198)
157 COG0770 MurF UDP-N-acetylmuram 23.6 3.5E+02 0.0075 26.8 7.8 94 20-114 300-395 (451)
158 PRK11929 putative bifunctional 23.4 2.9E+02 0.0064 29.8 7.9 75 42-116 829-905 (958)
159 COG3365 Uncharacterized protei 23.2 1.3E+02 0.0027 23.7 3.6 39 1-39 17-61 (118)
160 COG1692 Calcineurin-like phosp 23.1 1.2E+02 0.0026 27.5 4.0 65 48-117 2-70 (266)
161 PF02671 PAH: Paired amphipath 21.9 90 0.0019 20.0 2.3 36 5-43 2-39 (47)
162 COG0634 Hpt Hypoxanthine-guani 21.5 5.2E+02 0.011 22.2 9.4 77 18-98 10-117 (178)
163 PF09587 PGA_cap: Bacterial ca 20.9 1.4E+02 0.0029 26.6 4.0 35 226-262 212-246 (250)
164 PF04263 TPK_catalytic: Thiami 20.8 1.1E+02 0.0023 24.4 3.0 55 47-101 36-112 (123)
165 COG0148 Eno Enolase [Carbohydr 20.3 7.3E+02 0.016 24.2 8.8 86 20-111 169-281 (423)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-83 Score=552.85 Aligned_cols=301 Identities=67% Similarity=1.228 Sum_probs=292.7
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccC
Q 021898 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 85 (306)
++++.|+++.+++.+++.++..||.+++++|.+|+||..++.|+.|+|||||++.+|..+|+..|.++...|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecC
Q 021898 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHg 165 (306)
||.+|+|++.+|+.||.+||++|.+||||||.+.+...|||++||.+|||+..+|+...+.|+.||++|++++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccce
Q 021898 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGY 245 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~ 245 (306)
|++|++.+++||+.++|..++|+++.++|+|||||.+.++|..||||.|+.||+++++.|++.||+.+|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCCCCCCCC-CCCCCCCC
Q 021898 246 NWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTT-RRTPDYFL 306 (306)
Q Consensus 246 ~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 306 (306)
++.++++|+|||||||||++++|.||+|+|+++....|+.|++.|...+-.++ |+..|||+
T Consensus 242 k~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 242 KWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 99999999999999999999999999999999999999999999988764333 55569996
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-75 Score=498.87 Aligned_cols=303 Identities=60% Similarity=1.109 Sum_probs=296.0
Q ss_pred hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCc
Q 021898 4 QADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDY 83 (306)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~ 83 (306)
+-++|++|+.+++++.++++++..||+.++++|..|.|+..++.|+.|+|||||++.+|.++|+..|..+...|||+|||
T Consensus 3 ~~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDf 82 (306)
T KOG0373|consen 3 KMDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDF 82 (306)
T ss_pred cCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEe
Q 021898 84 VDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCL 163 (306)
Q Consensus 84 vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~v 163 (306)
||||..|+|++.+++.||.+||+++.+||||||.+-+...|||++||..+||..+.|+...+.|+.|+++|+++++++||
T Consensus 83 VDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCV 162 (306)
T KOG0373|consen 83 VDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCV 162 (306)
T ss_pred cccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeecccccc
Q 021898 164 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMD 243 (306)
Q Consensus 164 HgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~ 243 (306)
|||+||++..++||+.+.|.+++|+++.++|++||||.+.+.|.-||||.|+.||++.+.+|...|++++|.|+||.+.+
T Consensus 163 HGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~E 242 (306)
T KOG0373|consen 163 HGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQE 242 (306)
T ss_pred cCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCe-EEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCCCCCCCCCCCCCCCC
Q 021898 244 GYNWCQDKN-VVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRRTPDYFL 306 (306)
Q Consensus 244 G~~~~~~~~-~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
||++.+++| ++|||||||||++++|.|+||.++++.+.+++.|.+.|...|-.+++.+--||+
T Consensus 243 G~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 243 GFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred hHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 999999888 999999999999999999999999999999999999999888878888888986
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=5.9e-73 Score=521.05 Aligned_cols=301 Identities=56% Similarity=1.073 Sum_probs=284.9
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccC
Q 021898 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 85 (306)
+++.+++.+++++.++++++.+||++|+++|++||++++++.|++|+|||||++.+|.++++..+.++.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecC
Q 021898 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHg 165 (306)
||+.++|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+...+|+.+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccce
Q 021898 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGY 245 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~ 245 (306)
|++|...++++++.++|+.+.|.++.++|++||||.+..+|.+++||.|+.||++++++||++|++++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred EEecC-CeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCCCCCCCCCCCCCCCC
Q 021898 246 NWCQD-KNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRRTPDYFL 306 (306)
Q Consensus 246 ~~~~~-~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
++.++ ++|+||||||+||+.++|+||+|.++++.++.|++|+|.+.+.++.+++..+-||.
T Consensus 242 ~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 242 KYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred EEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 98765 45999999999999999999999999999999999999988765544454456873
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.8e-72 Score=514.96 Aligned_cols=284 Identities=75% Similarity=1.331 Sum_probs=276.1
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCC
Q 021898 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDR 86 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDr 86 (306)
++++++++.++..++++++.+||++|+++|++||++++++.|++|+|||||++.+|.++|+..+.++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred CCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCC
Q 021898 87 GYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGG 166 (306)
Q Consensus 87 G~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgG 166 (306)
|++++|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|..+.++|++||++|+++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceE
Q 021898 167 LSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (306)
Q Consensus 167 i~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 246 (306)
|+|...++++++.++|+.+.+.++.+.|++||||.+..+|.+++||.|+.||++++++||++|++++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCC
Q 021898 247 WCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 290 (306)
Q Consensus 247 ~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 290 (306)
+.++++|+||||||+||+.++|+||+|.|+++.+++|++|+|.|
T Consensus 242 ~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 242 WMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.1e-71 Score=515.07 Aligned_cols=284 Identities=33% Similarity=0.643 Sum_probs=262.0
Q ss_pred ChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCC----cceEEecCCCCHHHHHHHHHHcCCCC-CCeE
Q 021898 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKC----PVTVCGDIHGQFHDLVELFRIGGNAP-DTNY 77 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~----~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~ 77 (306)
|.++++.+|+.+.+++.++++++.+||++|+++|++||+++++.. |++|||||||++.+|.++|+..+.++ .++|
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 567899999999999999999999999999999999999999975 89999999999999999999999874 5789
Q ss_pred EEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcC--hhhhHHHHHHhhccCceEE
Q 021898 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKHFTDLFDYLPLTAL 155 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~ 155 (306)
||||||||||++|+||+.+|++||..+|+++++||||||.+.++..|||.+||..+|+. ..+|+.+.++|++||++|+
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999973 6799999999999999999
Q ss_pred EeceEEEecCCCCCCCCCHHHHHhhccccc-----CCC----------------------CCcccccccCCCCCCCC-Cc
Q 021898 156 IESQVFCLHGGLSPSLDTLDNIRALDRIQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WG 207 (306)
Q Consensus 156 i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~~llW~dp~~~~~-~~ 207 (306)
++++++||||||+| ..++++++.++|+.. .|. .+++.|+|||||.+..+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999987 468899999887421 111 03578999999996555 67
Q ss_pred cCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEec
Q 021898 208 ISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFD 287 (306)
Q Consensus 208 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 287 (306)
+++||.|+.||++++++||++|++++||||||++++||++.++++|+||||||+||+.++|+||+|.|+++.+++|.+|+
T Consensus 242 ~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 242 NTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999884
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.7e-71 Score=511.74 Aligned_cols=294 Identities=45% Similarity=0.895 Sum_probs=278.4
Q ss_pred hHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeE
Q 021898 6 DLDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNY 77 (306)
Q Consensus 6 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~ 77 (306)
+++++|+.+.+.. .++++++.+||++|+++|++||++++++.+++|||||||++.+|.++|+..+.++.+++
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 4888999988654 59999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEe
Q 021898 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (306)
||||||||||++++|++.+++.+|..+|.++++||||||.+.++..|||..|+..+| ...+|..+.++|++||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y-~~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhc-CHHHHHHHHHHHHhccHhheec
Confidence 999999999999999999999999999999999999999999999999999999999 4679999999999999999999
Q ss_pred ceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCccccChhhHHhhhhhcCCeEEEe
Q 021898 158 SQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (306)
Q Consensus 158 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 236 (306)
++++||||||+|...++++++.++|+.+.+.++++.|+|||||.. ..+|.+++||.|+.||++++++||++|++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999985 6789999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCC-CCCCCCCC
Q 021898 237 AHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ-IEPDTTRR 300 (306)
Q Consensus 237 GH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~-~~~~~~~~ 300 (306)
|||++++||++.++++|+||||||+||+.++|+||+|.|+++..+.|.+|+|.+.+ .++|-+|+
T Consensus 249 ~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~~~ 313 (320)
T PTZ00480 249 AHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGASQQNKP 313 (320)
T ss_pred cCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccccccccccC
Confidence 99999999999999999999999999999999999999999999999999988766 34555554
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=4.8e-70 Score=503.72 Aligned_cols=286 Identities=44% Similarity=0.771 Sum_probs=271.1
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccC
Q 021898 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vD 85 (306)
.++.+++++++++.++++++.+||++|+++|++||++++++.|++|||||||++.+|.++|+..+.++.++|+|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecC
Q 021898 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHg 165 (306)
||++|+|++.+++++|..+|.++++||||||.+.++..++|..|+..+| ...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999999 567899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCC-------CCccC-CCCCccccChhhHHhhhhhcCCeEEEee
Q 021898 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-------GWGIS-PRGAGYTFGQDIASQFNHTNGLTLISRA 237 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~-------~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIrG 237 (306)
|++|.+.++++++.++|+.+.+..++++|+|||||.... +|.++ +||.|+.||++++++||++|++++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999988888999999999997422 47654 8999999999999999999999999999
Q ss_pred ccccccceEEecCC------eEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCCC
Q 021898 238 HQLVMDGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQI 293 (306)
Q Consensus 238 H~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 293 (306)
||++++||++.+++ +|+||||||+||+.++|+||+|.|+++ ..+|.+|++.|+++
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~ 301 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 301 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCC
Confidence 99999999998876 899999999999999999999999987 47999999999884
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=6.7e-70 Score=503.88 Aligned_cols=290 Identities=38% Similarity=0.713 Sum_probs=274.4
Q ss_pred ChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCc----ceEEecCCCCHHHHHHHHHHcCCCC-CCeE
Q 021898 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCP----VTVCGDIHGQFHDLVELFRIGGNAP-DTNY 77 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~----i~viGDIHG~~~~L~~ll~~~~~~~-~~~~ 77 (306)
|...++.++++++++..++++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..+.++ .+++
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~y 91 (316)
T cd07417 12 TLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPY 91 (316)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeE
Confidence 5677999999999999999999999999999999999999999755 9999999999999999999998764 5689
Q ss_pred EEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEe
Q 021898 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (306)
+|||||||||+.|+||+.+++++|..+|.++++||||||.+.++..++|..|+..+|+ ..+|+.+.++|++||++++++
T Consensus 92 lFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~ 170 (316)
T cd07417 92 LFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLIN 170 (316)
T ss_pred EEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeC
Confidence 9999999999999999999999999999999999999999999999999999999994 679999999999999999999
Q ss_pred ceEEEecCCC-CCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEe
Q 021898 158 SQVFCLHGGL-SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (306)
Q Consensus 158 ~~~l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 236 (306)
++++|||||+ ++...++++++.++|+.+.+.++++.|+|||||.+..+|.+++||.|+.||++++++||++|++++|||
T Consensus 171 ~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 250 (316)
T cd07417 171 GKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIR 250 (316)
T ss_pred CeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEE
Confidence 9999999999 556788999999999988888899999999999988899999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcC-CCceeEEEecCCCCCC
Q 021898 237 AHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGE-NMEQNFLQFDPAPRQI 293 (306)
Q Consensus 237 GH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~~ 293 (306)
|||++++||++.++++|+||||||+||+.++|+||+|.|++ +++++|++|++.|++.
T Consensus 251 ~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~ 308 (316)
T cd07417 251 SHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPN 308 (316)
T ss_pred CCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCC
Confidence 99999999999999999999999999999999999999999 8899999999998774
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6.7e-70 Score=499.80 Aligned_cols=282 Identities=46% Similarity=0.954 Sum_probs=269.4
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEE
Q 021898 7 LDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYL 78 (306)
Q Consensus 7 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~v 78 (306)
++++|+.+.+.. .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 577888887654 699999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEec
Q 021898 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIES 158 (306)
Q Consensus 79 fLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 158 (306)
|||||||||++++|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++||++|++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999994 6799999999999999999999
Q ss_pred eEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCccccChhhHHhhhhhcCCeEEEee
Q 021898 159 QVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRA 237 (306)
Q Consensus 159 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrG 237 (306)
+++|||||++|...++++++.++|+.+.+..+.+.+++||||.. ..+|.+++||.|+.||++++++||++||+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999988889999999999984 67899999999999999999999999999999999
Q ss_pred ccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCC
Q 021898 238 HQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPA 289 (306)
Q Consensus 238 H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 289 (306)
||++++||++.++++|+||||||+||+.++|+||+|.|+++..++|++|+|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999864
No 10
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.9e-69 Score=496.27 Aligned_cols=282 Identities=40% Similarity=0.797 Sum_probs=267.5
Q ss_pred hHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeE
Q 021898 6 DLDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNY 77 (306)
Q Consensus 6 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~ 77 (306)
-++.+|+++.+.. .++++++.+||++|+++|++||++++++.|++|+|||||++.+|.++|+..+.++.+++
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 3567777775533 58999999999999999999999999999999999999999999999999999989999
Q ss_pred EEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEe
Q 021898 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (306)
+|||||||||++++|++.+++.+|..+|.++++||||||.+.++..|||..++..+|+ ..+|..+.++|++||++++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEec
Confidence 9999999999999999999999999999999999999999999999999999999994 679999999999999999999
Q ss_pred ceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCccccChhhHHhhhhhcCCeEEEe
Q 021898 158 SQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (306)
Q Consensus 158 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 236 (306)
++++|||||++|.+.++++++.++|+.+.+.++++.|++||||.+ ..+|.+++||.|+.||++++++||++|++++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 999999999999999999999999999988899999999999985 6799999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecC
Q 021898 237 AHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 288 (306)
Q Consensus 237 GH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 288 (306)
|||++++||++.++++|+||||||+||+..+|+||+|.|+++..++|.+|.+
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999998865
No 11
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-71 Score=479.33 Aligned_cols=302 Identities=81% Similarity=1.394 Sum_probs=296.9
Q ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCcc
Q 021898 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (306)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v 84 (306)
.+++.+|+++.+++++++.++..+|+.|+++|++|.++..+..|++|+||+||+|++|.++++..|..++..++|+||||
T Consensus 18 ~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyv 97 (319)
T KOG0371|consen 18 LDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYV 97 (319)
T ss_pred cccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeec
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEec
Q 021898 85 DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLH 164 (306)
Q Consensus 85 DrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vH 164 (306)
|||++|.|++.++.++|..||++|.+||||||.+.+...|||++||.+|||...+|..|.+.|+.+|++|+++++++|+|
T Consensus 98 drGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~H 177 (319)
T KOG0371|consen 98 DRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLH 177 (319)
T ss_pred ccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccc
Q 021898 165 GGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDG 244 (306)
Q Consensus 165 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G 244 (306)
||++|.+..+++++.++|..++|+++.++|+||+||+++.+|..++||.|+.||.+..+.|-.+||+++|-|.|+.+.+|
T Consensus 178 GgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g 257 (319)
T KOG0371|consen 178 GGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEG 257 (319)
T ss_pred CCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCCCCCCCCCCCCCCCC
Q 021898 245 YNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRRTPDYFL 306 (306)
Q Consensus 245 ~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
|...+...++|+||||+||++++|.+|+++++++....|.||+|+|.+.++..++.+||||+
T Consensus 258 ~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 258 YNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred cceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999996
No 12
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2e-69 Score=500.88 Aligned_cols=286 Identities=47% Similarity=0.933 Sum_probs=272.9
Q ss_pred hhhHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcC-CC
Q 021898 4 QADLDRQIEHLMQC----------KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGG-NA 72 (306)
Q Consensus 4 ~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~-~~ 72 (306)
...++.+|..+.+. ..++++++.+||.++.+++.++|+++++++||.|+|||||++.+|.+++...+ .|
T Consensus 6 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~p 85 (331)
T KOG0374|consen 6 SLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFP 85 (331)
T ss_pred hhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCC
Confidence 44566666665332 24999999999999999999999999999999999999999999999999999 99
Q ss_pred CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCc
Q 021898 73 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPL 152 (306)
Q Consensus 73 ~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~ 152 (306)
+..+|+|||||||||++|+|++.+|+++|++||+++++||||||.+.++..|||++||..+|+...+|+.+++.|..||+
T Consensus 86 p~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~ 165 (331)
T KOG0374|consen 86 PDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPL 165 (331)
T ss_pred CcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCch
Confidence 99999999999999999999999999999999999999999999999999999999999999767899999999999999
Q ss_pred eEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCccccChhhHHhhhhhcCC
Q 021898 153 TALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGL 231 (306)
Q Consensus 153 ~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~ 231 (306)
+|+++++++|+|||++|.+.++++++.+.||.+.+..++++|++|+||.. ..+|.++.||.++.||++++++||+++++
T Consensus 166 ~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~l 245 (331)
T KOG0374|consen 166 AALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDL 245 (331)
T ss_pred hheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999985 68999999999999999999999999999
Q ss_pred eEEEeeccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCC
Q 021898 232 TLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPA 289 (306)
Q Consensus 232 ~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 289 (306)
++||||||++++||+++.+++++||||||+||+.+.|.||+|.+|+++.++|.++.|.
T Consensus 246 dlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 246 DLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred ceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 9999999999999999999999999999999999999999999999999999999995
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.3e-67 Score=480.86 Aligned_cols=269 Identities=53% Similarity=0.981 Sum_probs=259.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHH
Q 021898 20 LPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVA 99 (306)
Q Consensus 20 ~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 99 (306)
++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.+++||||||||||++++|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHh
Q 021898 100 LKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRA 179 (306)
Q Consensus 100 lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~ 179 (306)
+|..+|.++++||||||.+.++..+||..|+..+|+ ..+|+.+.++|++||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6799999999999999999999999999999999999999999
Q ss_pred hcccccCCCCCcccccccCCCC-CCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEec
Q 021898 180 LDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFS 258 (306)
Q Consensus 180 i~r~~~~~~~~~~~~llW~dp~-~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifS 258 (306)
++|+.+.+.++.+.+++||||. ...+|.+++||.|+.||++++++||++|++++||||||++++||+..++++|+||||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 9999888888999999999996 578899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCcEEEEEEcCCCceeEEEecCC
Q 021898 259 APNYCYRCGNMAAILEIGENMEQNFLQFDPA 289 (306)
Q Consensus 259 a~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 289 (306)
||+||+.++|+||++.|+++.+++|.+|+|.
T Consensus 240 a~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 240 APNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999998899999999999999999999864
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=7.5e-66 Score=482.87 Aligned_cols=290 Identities=37% Similarity=0.606 Sum_probs=260.9
Q ss_pred ChhhHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCeeeeC----CcceEEecCCCCHHHHHHHHHH
Q 021898 3 SQADLDRQIEHLMQC----------KPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRI 68 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~il~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~~ 68 (306)
|.+.++.||+.++.. ..++++++.+||++|+++|++||++++++ .|++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 567789999999654 45899999999999999999999999997 7999999999999999999999
Q ss_pred cCCCCC-CeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcC--hhhhHHHHH
Q 021898 69 GGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKHFTD 145 (306)
Q Consensus 69 ~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~ 145 (306)
.+.++. +++||||||||||++|+||+.++++++..+|.+|++||||||.+.++..+||..|+..+|+. ..+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 988764 56999999999999999999999999999999999999999999999999999999999975 469999999
Q ss_pred HhhccCceEEEeceEEEecCCCC---------------------------CCCCCHHHHHhhcccc-cCCCCC---cccc
Q 021898 146 LFDYLPLTALIESQVFCLHGGLS---------------------------PSLDTLDNIRALDRIQ-EVPHEG---PMCD 194 (306)
Q Consensus 146 ~~~~lP~~~~i~~~~l~vHgGi~---------------------------p~~~~~~~i~~i~r~~-~~~~~~---~~~~ 194 (306)
||++||++++++++++||||||+ |.+.++++++.++|+. +.+..+ +++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999989999999994 3456789999999874 454443 4789
Q ss_pred cccCCCCCCCCCccC-CCCCccccChhhHHhhhhhcCCeEEEeeccc------------cccceEEecC---CeEEEEec
Q 021898 195 LLWSDPDDRCGWGIS-PRGAGYTFGQDIASQFNHTNGLTLISRAHQL------------VMDGYNWCQD---KNVVTVFS 258 (306)
Q Consensus 195 llW~dp~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~------------~~~G~~~~~~---~~~itifS 258 (306)
+|||||....+|.++ +||.|+.||++++++||++|++++||||||+ +.+||++.++ ++|+||||
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFS 327 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFS 327 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEec
Confidence 999999987888776 7999999999999999999999999999996 6799999887 99999999
Q ss_pred CCCCc------ccCCCcEEEEEEcCC--CceeEEEecCC-CCC
Q 021898 259 APNYC------YRCGNMAAILEIGEN--MEQNFLQFDPA-PRQ 292 (306)
Q Consensus 259 a~~y~------~~~~n~~avl~i~~~--~~~~~~~~~~~-~~~ 292 (306)
||+|| +.++|+||++.+..+ ...+|++|+++ |++
T Consensus 328 a~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~ 370 (377)
T cd07418 328 APDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRP 370 (377)
T ss_pred CCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCC
Confidence 99999 578999999999664 47999999998 654
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=4.8e-65 Score=472.18 Aligned_cols=271 Identities=41% Similarity=0.754 Sum_probs=252.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCC--------CeEEEeCCccCCCCC
Q 021898 18 KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPD--------TNYLFMGDYVDRGYY 89 (306)
Q Consensus 18 ~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~--------~~~vfLGD~vDrG~~ 89 (306)
..++++++.+||++|+++|++||++++++.|++||||||||+++|.++|+..+.++. .++||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 458999999999999999999999999999999999999999999999998887643 579999999999999
Q ss_pred cHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcC-----hhhhHHHHHHhhccCceEEEeceEEEec
Q 021898 90 SVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKHFTDLFDYLPLTALIESQVFCLH 164 (306)
Q Consensus 90 s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~l~vH 164 (306)
|+||+.++++++..+|.++++||||||.+.++..+||..++..+|+. ..+|..+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999999865 3588999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcccc-cCCCCCcccccccCCCCC---CCCCccCC---CCCc--cccChhhHHhhhhhcCCeEEE
Q 021898 165 GGLSPSLDTLDNIRALDRIQ-EVPHEGPMCDLLWSDPDD---RCGWGISP---RGAG--YTFGQDIASQFNHTNGLTLIS 235 (306)
Q Consensus 165 gGi~p~~~~~~~i~~i~r~~-~~~~~~~~~~llW~dp~~---~~~~~~~~---rg~g--~~fg~~~~~~fl~~~~~~~iI 235 (306)
||++|...++++++.+.|+. ..+....+.+++||||.+ ..+|.+++ ||.| +.||++++++||++||+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999987 445567889999999985 35677766 9998 799999999999999999999
Q ss_pred eeccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecC
Q 021898 236 RAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 288 (306)
Q Consensus 236 rGH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 288 (306)
||||++++||+..++++|+||||||+||+.++|+||++.|+++.+++|++++|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999986
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.1e-62 Score=444.61 Aligned_cols=287 Identities=43% Similarity=0.766 Sum_probs=270.1
Q ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCcc
Q 021898 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (306)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v 84 (306)
...+.+.+++.+.+.+++++.+.|+.++..+|++|++++++.+||.|+|||||+|.+|.++|+..|.|...+|+||||||
T Consensus 46 P~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYV 125 (517)
T KOG0375|consen 46 PRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 125 (517)
T ss_pred cchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeecccc
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEec
Q 021898 85 DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLH 164 (306)
Q Consensus 85 DrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vH 164 (306)
|||.+|+||+.+|.+||+.||+.+++||||||++.+...+.|..||.-+| +.++|+...+.|+.||++|+.++.++|||
T Consensus 126 DRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVH 204 (517)
T KOG0375|consen 126 DRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVH 204 (517)
T ss_pred ccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEec
Confidence 99999999999999999999999999999999999999999999999999 67899999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-------CCCCc-cCCCCCccccChhhHHhhhhhcCCeEEEe
Q 021898 165 GGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-------RCGWG-ISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (306)
Q Consensus 165 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-------~~~~~-~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 236 (306)
||++|.+.++++|+.++|..+.|.-+++||+||+||.+ .+.|. .+-||.+|.|...++.+||+.||+--|||
T Consensus 205 GGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiR 284 (517)
T KOG0375|consen 205 GGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIR 284 (517)
T ss_pred CCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhh
Confidence 99999999999999999999999999999999999973 22343 45799999999999999999999999999
Q ss_pred eccccccceEEecCC------eEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCCCCC
Q 021898 237 AHQLVMDGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQI 293 (306)
Q Consensus 237 GH~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 293 (306)
+|+.++.||...... .+|||||||||.+.++|+||||+-..+ ...++||..+||++
T Consensus 285 AHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHPY 346 (517)
T KOG0375|consen 285 AHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 346 (517)
T ss_pred hhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCCc
Confidence 999999999876653 489999999999999999999987654 78999999999985
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-54 Score=395.65 Aligned_cols=287 Identities=31% Similarity=0.621 Sum_probs=257.7
Q ss_pred ChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeC----CcceEEecCCCCHHHHHHHHHHcCCCC-CCeE
Q 021898 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRIGGNAP-DTNY 77 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~ 77 (306)
+..+++.+|+.|+..+++++..+..|+.+|+++|++.|++-+++ ..|.|+||+||.+++|.-+|-+.|.|. ...|
T Consensus 117 ~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npY 196 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPY 196 (631)
T ss_pred CchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCe
Confidence 35679999999999999999999999999999999999998874 579999999999999999999999976 5679
Q ss_pred EEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhc--ChhhhHHHHHHhhccCceEE
Q 021898 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG--NANVWKHFTDLFDYLPLTAL 155 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~ 155 (306)
||.||+||||.+|+|+|..|+++...||..+++-|||||..++|..|||..|...+|. ..++..-+.++|++||++.+
T Consensus 197 vFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~ti 276 (631)
T KOG0377|consen 197 VFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTI 276 (631)
T ss_pred eecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999999999999999999999999999999995 35788889999999999999
Q ss_pred EeceEEEecCCCCCCCCCHHHHHhhcccc-----cCCC---------C--------CcccccccCCCCCCCCCccC-CCC
Q 021898 156 IESQVFCLHGGLSPSLDTLDNIRALDRIQ-----EVPH---------E--------GPMCDLLWSDPDDRCGWGIS-PRG 212 (306)
Q Consensus 156 i~~~~l~vHgGi~p~~~~~~~i~~i~r~~-----~~~~---------~--------~~~~~llW~dp~~~~~~~~~-~rg 212 (306)
++.++++||||++.. +.++-+.++.|.. ..|- + ..+.|++||||....|+.+| -||
T Consensus 277 id~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RG 355 (631)
T KOG0377|consen 277 IDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRG 355 (631)
T ss_pred cccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccC
Confidence 999999999999754 4566666665432 1111 0 12568999999988887776 599
Q ss_pred CccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEcCCCceeEEEecCCC
Q 021898 213 AGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 290 (306)
Q Consensus 213 ~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 290 (306)
.|.+||++.++.||++++++++||+|++.++||++.++++|+|||||+||.....|+||++++.......|+||.++.
T Consensus 356 gG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k 433 (631)
T KOG0377|consen 356 GGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAK 433 (631)
T ss_pred CcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999998888899999999999999999999553
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.5e-47 Score=358.99 Aligned_cols=290 Identities=38% Similarity=0.715 Sum_probs=269.1
Q ss_pred ChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeeeC----CcceEEecCCCCHHHHHHHHHHcCCCC-CCeE
Q 021898 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRIGGNAP-DTNY 77 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~----~~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~ 77 (306)
|.+.+..+++.+.....++...+-+|+.++++++.++|++++++ ..+.++||.||++.++.+++...|.|+ ...+
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 45667777777778888999999999999999999999999985 459999999999999999999999875 5779
Q ss_pred EEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEe
Q 021898 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (306)
+|-||++|||..+.|+...+...+..+|++++++|||||...++..|||..++..+|. ...+.-+.+.|..||++..++
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~ 324 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLIN 324 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999995 445555669999999999999
Q ss_pred ceEEEecCCCC-CCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEe
Q 021898 158 SQVFCLHGGLS-PSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISR 236 (306)
Q Consensus 158 ~~~l~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIr 236 (306)
++++.+|||+. ++-..+++++.|.|+...+.+++.++++|+||....+..+|.||.|..||.+++.+||+.+++++|||
T Consensus 325 ~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~r 404 (476)
T KOG0376|consen 325 NKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIR 404 (476)
T ss_pred CceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhh
Confidence 99999999985 45567999999999988889999999999999999999999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCcccCCCcEEEEEEc-CCCceeEEEecCCCCCC
Q 021898 237 AHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIG-ENMEQNFLQFDPAPRQI 293 (306)
Q Consensus 237 GH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~~ 293 (306)
||+..+.||++.++|+|+|+||||+||...+|.||++.++ ++.+..+.+|++.|++.
T Consensus 405 she~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 405 SHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPD 462 (476)
T ss_pred ccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCC
Confidence 9999999999999999999999999999999999999998 56889999999999873
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.1e-35 Score=263.55 Aligned_cols=214 Identities=48% Similarity=0.788 Sum_probs=175.0
Q ss_pred eEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHH
Q 021898 50 TVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e 129 (306)
+|||||||++++|.++++..+..+.+++|||||++|||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999998888999999999999999999999999999877 7899999999999988776654433
Q ss_pred H--------HHHhcChhhhHHHHHHhhccCceEEEec-eEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCC
Q 021898 130 C--------LRKYGNANVWKHFTDLFDYLPLTALIES-QVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP 200 (306)
Q Consensus 130 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp 200 (306)
. ...+.....+..+.+|+.+||+++.++. +++|||||++|.+....+.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 2233345677888999999999987776 89999999999876555443 2233445788999998
Q ss_pred CCCCCC-ccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCcccCCCcEEEEE
Q 021898 201 DDRCGW-GISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILE 274 (306)
Q Consensus 201 ~~~~~~-~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~~avl~ 274 (306)
.....+ ..+.++. ++++.+.|++.++.+.||+|||++..|+.....+++++|+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 743332 2223333 899999999999999999999999999876678899999999999877777777764
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=9.9e-28 Score=216.13 Aligned_cols=193 Identities=20% Similarity=0.317 Sum_probs=134.4
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCC---------CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGN---------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~---------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
++++||||||||++.|.++|+.++. +..+++|||||||||||+|.+|+++++++. .+.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 3689999999999999999998775 356899999999999999999999999884 34589999999999
Q ss_pred chhhhhcC-------ChHHHHHHhcC------hhhhHHHHHHhhccCceEEEe-ceEEEecCCCCCCCC--CHHHHHhhc
Q 021898 118 RQITQVYG-------FYDECLRKYGN------ANVWKHFTDLFDYLPLTALIE-SQVFCLHGGLSPSLD--TLDNIRALD 181 (306)
Q Consensus 118 ~~~~~~~~-------f~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~~--~~~~i~~i~ 181 (306)
++++...+ ...+....|.. ..+.+.+.+|++++|+...+. ++++|||||++|... ..+++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~---- 154 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKV---- 154 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhh----
Confidence 88765422 12234444421 235677899999999987653 679999999987631 11111
Q ss_pred ccccCCCCCcccccccCCCCC---------CCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCe
Q 021898 182 RIQEVPHEGPMCDLLWSDPDD---------RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKN 252 (306)
Q Consensus 182 r~~~~~~~~~~~~llW~dp~~---------~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~ 252 (306)
...++|++-.. ...|..+. .|...+|.|||++..... .++
T Consensus 155 ----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~---~~~ 203 (245)
T PRK13625 155 ----------QTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRF---VNH 203 (245)
T ss_pred ----------hhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCcccee---cCC
Confidence 22344543110 11121111 144679999999975432 245
Q ss_pred EEEEecCCCCcccCCCcEEEEEEcCCCc
Q 021898 253 VVTVFSAPNYCYRCGNMAAILEIGENME 280 (306)
Q Consensus 253 ~itifSa~~y~~~~~n~~avl~i~~~~~ 280 (306)
.+.|.++.-| ++.-+.+.+.+...
T Consensus 204 ~i~IDtGa~~----gG~Ltal~l~~~~~ 227 (245)
T PRK13625 204 TVNIDTGCVF----GGRLTALRYPEMET 227 (245)
T ss_pred eEEEECcCcc----CCEEEEEECCCCcE
Confidence 7788888644 56778888876543
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=8.5e-28 Score=211.42 Aligned_cols=178 Identities=19% Similarity=0.293 Sum_probs=130.4
Q ss_pred eEEecCCCCHHHHHHHHHHcCC--------CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhc---CCcEEEecCCcccc
Q 021898 50 TVCGDIHGQFHDLVELFRIGGN--------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRY---RDRITILRGNHESR 118 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~---p~~v~~LrGNHE~~ 118 (306)
+||||||||+++|.++|+.++. .+.+.+|++||+||||+++.++++++++++... +.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998873 468999999999999999999999999997543 45799999999999
Q ss_pred hhhhhcCChH-HHHHHhc-----Ch---hhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCC
Q 021898 119 QITQVYGFYD-ECLRKYG-----NA---NVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHE 189 (306)
Q Consensus 119 ~~~~~~~f~~-e~~~~~~-----~~---~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 189 (306)
.++..+.+.. ....... .. .....+.+|++++|+...+ ++++|||||++|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~~------------------- 140 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGPL------------------- 140 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHHH-------------------
Confidence 9875433221 1111110 01 1224568999999998765 4699999999443
Q ss_pred CcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCC
Q 021898 190 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPN 261 (306)
Q Consensus 190 ~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~ 261 (306)
|++.- +.+... ..-+...+.++++.++.++||+|||+++.|....+++++++|.++..
T Consensus 141 -------w~r~y----~~~~~~---~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~ 198 (208)
T cd07425 141 -------WYRGY----SKETSD---KECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMS 198 (208)
T ss_pred -------HhhHh----hhhhhh---ccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcc
Confidence 22100 000000 00012457888999999999999999998887788999999988643
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=4.7e-26 Score=202.33 Aligned_cols=116 Identities=26% Similarity=0.369 Sum_probs=92.0
Q ss_pred eEEecCCCCHHHHHHHHHHcCCC--------CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhh
Q 021898 50 TVCGDIHGQFHDLVELFRIGGNA--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQIT 121 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~ 121 (306)
+||||||||++.|.++|+.++.. +.+++|||||||||||+|.+|+++++++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 69999999999999999988653 568999999999999999999999999864 34799999999999875
Q ss_pred hhcCC------h-----------HHHHHHhc-ChhhhHHHHHHhhccCceEEEeceEEEecCCCC
Q 021898 122 QVYGF------Y-----------DECLRKYG-NANVWKHFTDLFDYLPLTALIESQVFCLHGGLS 168 (306)
Q Consensus 122 ~~~~f------~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 168 (306)
...+. . .+..+.++ .....+...+|+++||+.. ..++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~-~~~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFL-DLGGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEE-EECCEEEEECCcC
Confidence 32210 0 12333332 2345677899999999986 4568999999985
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=8.2e-26 Score=206.17 Aligned_cols=219 Identities=19% Similarity=0.302 Sum_probs=145.5
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCC-CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcC
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~ 125 (306)
++++||||||||+++|.++++.++. +..+.+|||||+|||||+|.+|++++.++ +.++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 3689999999999999999998875 56799999999999999999999999987 347999999999998876555
Q ss_pred Ch----HHHHHHhcChhhhHHHHHHhhccCceEEE-eceEEEecCCCCCCCCCHHHHHhhcccccCCCC----Ccccccc
Q 021898 126 FY----DECLRKYGNANVWKHFTDLFDYLPLTALI-ESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHE----GPMCDLL 196 (306)
Q Consensus 126 f~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~----~~~~~ll 196 (306)
.. .....++......+.+.+|++++|+...+ .+++++||||++|.+...+.....++.+..... ..+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 32 12233332334556788999999998654 568999999999998544433333222211111 1233444
Q ss_pred cCCCCCCCCCccCCCCCc-cccChhhHH--hhhh-----------------------------hcCCeEEEeeccccccc
Q 021898 197 WSDPDDRCGWGISPRGAG-YTFGQDIAS--QFNH-----------------------------TNGLTLISRAHQLVMDG 244 (306)
Q Consensus 197 W~dp~~~~~~~~~~rg~g-~~fg~~~~~--~fl~-----------------------------~~~~~~iIrGH~~~~~G 244 (306)
|+.|. .|.++..|.. ..|.-.++. +||. ...-..||-||.....|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 44442 2322222211 000000000 0000 01234799999999778
Q ss_pred eEEecCCeEEEEecCCCCcccCCCcEEEEEEcCC
Q 021898 245 YNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGEN 278 (306)
Q Consensus 245 ~~~~~~~~~itifSa~~y~~~~~n~~avl~i~~~ 278 (306)
... ...++.|.|+--+ +++-+.++++..
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~ 261 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLEDK 261 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCCC
Confidence 765 6678999888433 678899999743
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.94 E-value=9e-26 Score=202.09 Aligned_cols=202 Identities=20% Similarity=0.325 Sum_probs=131.8
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCC----------CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNA----------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~----------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE 116 (306)
+|+.||||||||+.+|.++|+.++.. +.+++|||||+|||||+|.+|+++|++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 47999999999999999999988654 357999999999999999999999999864 347999999999
Q ss_pred cchhhhhcCC-------hHHHHHHhc--ChhhhHHHHHHhhccCceEEEe-ceEEEecCCCCCCCCCHHHHHhhcccccC
Q 021898 117 SRQITQVYGF-------YDECLRKYG--NANVWKHFTDLFDYLPLTALIE-SQVFCLHGGLSPSLDTLDNIRALDRIQEV 186 (306)
Q Consensus 117 ~~~~~~~~~f-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~ 186 (306)
.++++...+. ..++...+. ...+.+.+.+||++||+...++ ++++|||||+++.+.....
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~---------- 148 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS---------- 148 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc----------
Confidence 9887653221 122333332 2346678899999999986554 4799999998764321110
Q ss_pred CCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhh-hhcCCeEEEeeccccccceEEecCCeEEEEecCCCCccc
Q 021898 187 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFN-HTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYR 265 (306)
Q Consensus 187 ~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl-~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~ 265 (306)
.......+|.+..... ..-+. .. -..+. ...+.+.+|.|||++..... .+..+-|-+..-|
T Consensus 149 --~~~~~~~~~~~~~~~~----~~~~~---~~---~~~~~~~~~~~~~vv~GHt~~~~~~~---~~~~i~IDtGav~--- 210 (234)
T cd07423 149 --KRVRSFALYGDTTGET----DEFGL---PV---RRDWAKEYRGDALVVYGHTPVPEPRW---LNNTINIDTGCVF--- 210 (234)
T ss_pred --hhheeeeecccccCCc----CCCCC---cc---chhhHhhCCCCeEEEECCCCCccceE---eCCEEEEECCCCC---
Confidence 0011223444321000 00000 00 00011 12356789999999975432 2335667777655
Q ss_pred CCCcEEEEEEcCCC
Q 021898 266 CGNMAAILEIGENM 279 (306)
Q Consensus 266 ~~n~~avl~i~~~~ 279 (306)
+++-+.+.+++..
T Consensus 211 -gG~Lt~l~~~~~~ 223 (234)
T cd07423 211 -GGKLTALRYPERE 223 (234)
T ss_pred -CCcceEEECCCCc
Confidence 4677777776643
No 25
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.93 E-value=9.1e-25 Score=198.24 Aligned_cols=188 Identities=21% Similarity=0.270 Sum_probs=129.9
Q ss_pred cceEEecCCCCHHHHHHHHHHcCC------CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCC-cEEEecCCcccchh
Q 021898 48 PVTVCGDIHGQFHDLVELFRIGGN------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQI 120 (306)
Q Consensus 48 ~i~viGDIHG~~~~L~~ll~~~~~------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~LrGNHE~~~~ 120 (306)
++++||||||+++.|.++++.+.. ...+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 689999999999999999975432 23568999999999999999999999999888875 68999999998776
Q ss_pred hhhcC-----------------------------------------C----------------------hHHHHHHhcCh
Q 021898 121 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 137 (306)
Q Consensus 121 ~~~~~-----------------------------------------f----------------------~~e~~~~~~~~ 137 (306)
..... + ..++..+||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 0 12445566522
Q ss_pred --------hhhHHHHHHhhccCceEEEeceE-------------EEecCCCCCCCCCHHHHHhhc-ccccCCCCCccccc
Q 021898 138 --------NVWKHFTDLFDYLPLTALIESQV-------------FCLHGGLSPSLDTLDNIRALD-RIQEVPHEGPMCDL 195 (306)
Q Consensus 138 --------~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~~l 195 (306)
.+.+...+|++.||.... .+++ +|||||+.|..+.-+|...+. +....| -.++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~-~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHE-EDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEE-eCcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 234567889999999854 4456 999999999998777876644 222222 2378
Q ss_pred ccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCc
Q 021898 196 LWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYC 263 (306)
Q Consensus 196 lW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~ 263 (306)
+|.+.. |...++... ..-.+||.||+.. ....+.=+.|.+...|.
T Consensus 238 l~~R~~----f~~~~~~~~--------------~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~ 282 (304)
T cd07421 238 LSGRKN----VWNIPQELA--------------DKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFD 282 (304)
T ss_pred cccchh----hhcCccccc--------------CCCeEEEECCCCC-----ceecCCEEEEECCCCcC
Confidence 888632 222222110 0127899999922 33344445567776663
No 26
>PHA02239 putative protein phosphatase
Probab=99.93 E-value=7.2e-25 Score=195.94 Aligned_cols=175 Identities=23% Similarity=0.355 Sum_probs=125.1
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCC--CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~ 124 (306)
+++++||||||+++.|.++++.+.. .+.+.+||+|||||||+++.+++..++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 3689999999999999999987743 2468999999999999999999999998753 345899999999998765321
Q ss_pred C--------------ChHHHHHHhcCh------------------------------hhhHHHHHHhhccCceEEEeceE
Q 021898 125 G--------------FYDECLRKYGNA------------------------------NVWKHFTDLFDYLPLTALIESQV 160 (306)
Q Consensus 125 ~--------------f~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 160 (306)
+ ...++...|+.. ..+..+.+|+++||+.. ..+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~-~~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYY-KEDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceE-EECCE
Confidence 1 012444566411 12244566999999985 46789
Q ss_pred EEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccc
Q 021898 161 FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQL 240 (306)
Q Consensus 161 l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~ 240 (306)
+|||||+.|..+..+|- ..+++|.+. | .++ ..-+.||.||||
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f--~~~-----------------~~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----F--QPR-----------------KDGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----c--CCC-----------------CCCcEEEECCCC
Confidence 99999999876533332 567899963 2 111 122579999999
Q ss_pred cccceEEecCCeEEEEecCCCC
Q 021898 241 VMDGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 241 ~~~G~~~~~~~~~itifSa~~y 262 (306)
+..+.... .++.|.|.+..-|
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCcccc-cCCEEEeecCccc
Confidence 97655333 3446778777544
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.93 E-value=9.3e-25 Score=193.54 Aligned_cols=178 Identities=18% Similarity=0.215 Sum_probs=118.1
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcC
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~ 125 (306)
+|++||||||||+++|.++|+.++.. ..+++|||||+|||||+|.+|++++.+. ++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 58999999999999999999998764 6899999999999999999999999653 5889999999998865322
Q ss_pred ChH--------HHHHHhc--ChhhhHHHHHHhhccCceEEE---eceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcc
Q 021898 126 FYD--------ECLRKYG--NANVWKHFTDLFDYLPLTALI---ESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPM 192 (306)
Q Consensus 126 f~~--------e~~~~~~--~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 192 (306)
-.. +...... ....+....+|+++||+...+ ++++++||||++... .+.. .+ ...
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~--~~~~----~~------~~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV--YEWQ----KD------VDL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc--hhhh----cc------CCc
Confidence 100 0011111 112445667899999998544 357999999974321 1111 00 013
Q ss_pred cccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCC
Q 021898 193 CDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 193 ~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y 262 (306)
.+++|+++.....+ . +. ...+.+.+|.|||+++.-.. .+..+-|.+.+-|
T Consensus 159 ~~~~w~r~~~~~~~---~-~~-------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 159 HQVLWSRSRLGERQ---K-GQ-------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred cceEEcChhhhhcc---c-cc-------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 45788753211110 0 00 11245689999999875432 2346677777644
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=5.1e-25 Score=198.99 Aligned_cols=123 Identities=24% Similarity=0.354 Sum_probs=100.4
Q ss_pred ceEEecCCCCHHHHHHHHHHcCC-CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCCh
Q 021898 49 VTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (306)
Q Consensus 49 i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~ 127 (306)
++||||||||+++|+++|+.++. ++.+++||+||+|||||+|+||++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 58999999999999999999876 468999999999999999999999999985 4799999999999887655532
Q ss_pred H----HHHHHhcChhhhHHHHHHhhccCceEEEec-eEEEecCCCCCCCCCHH
Q 021898 128 D----ECLRKYGNANVWKHFTDLFDYLPLTALIES-QVFCLHGGLSPSLDTLD 175 (306)
Q Consensus 128 ~----e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~ 175 (306)
. +...++......+++.+|++++|+...+++ ++++||||++|.|+..+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~ 129 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQ 129 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHH
Confidence 1 222233233455678999999999976654 79999999999985443
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=6.7e-25 Score=198.80 Aligned_cols=123 Identities=23% Similarity=0.346 Sum_probs=100.9
Q ss_pred cceEEecCCCCHHHHHHHHHHcCC-CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCC
Q 021898 48 PVTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (306)
Q Consensus 48 ~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f 126 (306)
+++||||||||+++|.++|+.+++ +..++++|+||+|||||+|++|++++.++ +.++++|+||||.++++..+++
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g~ 77 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAGI 77 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcCC
Confidence 589999999999999999999885 56899999999999999999999999988 4468899999999998876664
Q ss_pred h----HHHHHHhcChhhhHHHHHHhhccCceEEEe-ceEEEecCCCCCCCCCH
Q 021898 127 Y----DECLRKYGNANVWKHFTDLFDYLPLTALIE-SQVFCLHGGLSPSLDTL 174 (306)
Q Consensus 127 ~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~~~~ 174 (306)
. ......+-.....+++.+|++++|+..... .++++||||++|.|+.-
T Consensus 78 ~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~ 130 (279)
T TIGR00668 78 SRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQ 130 (279)
T ss_pred CccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHH
Confidence 2 122223223456788999999999985443 36999999999999643
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.91 E-value=2.3e-23 Score=183.16 Aligned_cols=181 Identities=21% Similarity=0.277 Sum_probs=120.2
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcC
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~ 125 (306)
+|+++||||||++.+|.++++..+.. ..+.++++||++|||+++.++++++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999988763 579999999999999999999998865 26899999999998876543
Q ss_pred --ChHHHHHHhcC--------hhhhHHHHHHhhccCceEEEe---ceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcc
Q 021898 126 --FYDECLRKYGN--------ANVWKHFTDLFDYLPLTALIE---SQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPM 192 (306)
Q Consensus 126 --f~~e~~~~~~~--------~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 192 (306)
...+...+.+. ....+...+|+++||+...+. +++++||||+++... ..... + +...+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 11222222221 124556788999999987653 479999999865431 11110 0 11122235
Q ss_pred cccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCC
Q 021898 193 CDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAP 260 (306)
Q Consensus 193 ~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~ 260 (306)
.+++|+++...... +...-+.+.||.|||+++..+.. ++ .+-|...+
T Consensus 149 ~~~~w~~~~~~~~~------------------~~~~~~~~~iV~GHTh~~~~~~~--~~-~i~ID~Gs 195 (207)
T cd07424 149 EELLWSRTRIQKAQ------------------TQPIKGVDAVVHGHTPVKRPLRL--GN-VLYIDTGA 195 (207)
T ss_pred eeeeeccchhhhcC------------------ccccCCCCEEEECCCCCCcceEE--CC-EEEEECCC
Confidence 57889865311110 00011447899999998764432 33 34454443
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.89 E-value=2.5e-22 Score=177.99 Aligned_cols=116 Identities=21% Similarity=0.238 Sum_probs=86.3
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCC-CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcC
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~ 125 (306)
+|++||||||||+++|.++++...+ +..+++|||||+|||||+|.++++++.+ .++++|+||||.++++....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 5899999999999999999998874 4679999999999999999999998864 26899999999988864321
Q ss_pred ChH--------HHHHHhcC--hhhhHHHHHHhhccCceEEEe---ceEEEecCCCC
Q 021898 126 FYD--------ECLRKYGN--ANVWKHFTDLFDYLPLTALIE---SQVFCLHGGLS 168 (306)
Q Consensus 126 f~~--------e~~~~~~~--~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~ 168 (306)
-.. +...+... ........+|+++||+...+. +++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000 11111111 112234466999999886442 46899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.49 E-value=4.3e-13 Score=110.12 Aligned_cols=159 Identities=18% Similarity=0.200 Sum_probs=100.9
Q ss_pred cceEEecCCCCHHHH----HHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHH--HHhhhhcCCcEEEecCCcccchhh
Q 021898 48 PVTVCGDIHGQFHDL----VELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYRDRITILRGNHESRQIT 121 (306)
Q Consensus 48 ~i~viGDIHG~~~~L----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~LrGNHE~~~~~ 121 (306)
||++|||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 44445555677899999999999999887766554 333444466899999999998765
Q ss_pred hhcCChHHHHHH---------------------------------hcChhhhHHHHHHhhccCceEEEeceEEEecCCCC
Q 021898 122 QVYGFYDECLRK---------------------------------YGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLS 168 (306)
Q Consensus 122 ~~~~f~~e~~~~---------------------------------~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 168 (306)
............ ............+........-....++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 432211111100 00001111222233233333334557999999887
Q ss_pred CCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeecccc
Q 021898 169 PSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLV 241 (306)
Q Consensus 169 p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~ 241 (306)
+........ .....+.+.+..++++.++++++.||++.
T Consensus 162 ~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 553221111 11245677888999999999999999975
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.42 E-value=9.3e-12 Score=103.94 Aligned_cols=59 Identities=22% Similarity=0.373 Sum_probs=48.9
Q ss_pred cceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 48 PVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
++.++||+||+...+.++++.... .+.++++||++++++... ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 588999999999999999988755 789999999999998655 111 23699999999975
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.40 E-value=1.5e-11 Score=105.89 Aligned_cols=69 Identities=22% Similarity=0.314 Sum_probs=56.6
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCC--------cHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
+++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+.++ ..++++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 4789999999999999999988766678999999999999873 45667666554 33699999999975
Q ss_pred h
Q 021898 119 Q 119 (306)
Q Consensus 119 ~ 119 (306)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.36 E-value=2.3e-11 Score=102.16 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=50.0
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
+++.++||+||+..++..+++..... ..+.++++||++ +.+++..+.++. .+++.++||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 47899999999998888777766555 679999999998 457777776552 259999999997
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.32 E-value=3.6e-11 Score=99.78 Aligned_cols=124 Identities=19% Similarity=0.299 Sum_probs=81.7
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCC
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f 126 (306)
+|++++||+|++...+.++++.+ ...+.++++||++++ .++++.+... ++++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 47899999999999999999988 358899999999993 6777777555 59999999997553322110
Q ss_pred hHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCC
Q 021898 127 YDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGW 206 (306)
Q Consensus 127 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~ 206 (306)
.. +....... ....+++++||.+...
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 22222222 2245899999965431
Q ss_pred ccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccce
Q 021898 207 GISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGY 245 (306)
Q Consensus 207 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~ 245 (306)
..+.+.+.+.+...++++++.||++.+.-.
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 124 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVF 124 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEE
Confidence 123445666777889999999999985543
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.24 E-value=7.4e-11 Score=96.51 Aligned_cols=118 Identities=19% Similarity=0.170 Sum_probs=80.7
Q ss_pred cceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcH--HHHHHHHHhhhhcCCcEEEecCCcccchhhhhcC
Q 021898 48 PVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 48 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~ 125 (306)
++.++||+||++. .....+.+.+|++||+++++.... +.+.++.++. .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999987 123356789999999999886432 3455554442 12 36789999996311
Q ss_pred ChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCC
Q 021898 126 FYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG 205 (306)
Q Consensus 126 f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~ 205 (306)
.-+.+++++||.+.+.. +..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHL----------------------DLVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCc----------------------ccccc-------
Confidence 12457999999542211 00000
Q ss_pred CccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceE
Q 021898 206 WGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (306)
Q Consensus 206 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 246 (306)
....|.+.+.+++++.+.++++.||++.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567888899999999999999999988876
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.23 E-value=1.3e-10 Score=103.71 Aligned_cols=158 Identities=18% Similarity=0.214 Sum_probs=97.9
Q ss_pred cceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhh-----
Q 021898 48 PVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQ----- 122 (306)
Q Consensus 48 ~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~----- 122 (306)
+|+++|||||++.... .+.+.....|.++++||+++. +.+++..+.++ +..+++++||||.+....
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLLQPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhccCCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccchH
Confidence 6899999999987632 122233456899999999864 56777776655 346999999999865320
Q ss_pred ---------------hc----------------C------C--h-HHHHHHhcChhhhHHHHHHhhccCceEEEeceEEE
Q 021898 123 ---------------VY----------------G------F--Y-DECLRKYGNANVWKHFTDLFDYLPLTALIESQVFC 162 (306)
Q Consensus 123 ---------------~~----------------~------f--~-~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~ 162 (306)
.+ + + . .++...|+..+..+.+...++.++.+.-...++++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 00 0 0 0 14566676566777777888888633323347999
Q ss_pred ecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcC----CeEEEeec
Q 021898 163 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNG----LTLISRAH 238 (306)
Q Consensus 163 vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~----~~~iIrGH 238 (306)
.|+++.......+. .|. ..|.+. +..+|...+.+.+++.. +++++-||
T Consensus 153 aH~~~~G~g~~~~~---------------~cg---------~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fGH 204 (238)
T cd07397 153 AHNGPSGLGSDAED---------------PCG---------RDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFGH 204 (238)
T ss_pred eCcCCcCCCccccc---------------ccc---------cccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeCC
Confidence 99998643211100 111 122221 12356666655555443 79999999
Q ss_pred cccc
Q 021898 239 QLVM 242 (306)
Q Consensus 239 ~~~~ 242 (306)
.+..
T Consensus 205 ~H~~ 208 (238)
T cd07397 205 MHHR 208 (238)
T ss_pred ccCc
Confidence 9875
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.17 E-value=3.5e-09 Score=94.12 Aligned_cols=71 Identities=11% Similarity=0.165 Sum_probs=58.9
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
.++.++|||||++..+.++++.+...+.|.+|++||++++|+...++..++..+... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 569999999999999999998776667899999999999997676776666666433 23699999999975
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.07 E-value=1.8e-09 Score=92.30 Aligned_cols=65 Identities=22% Similarity=0.312 Sum_probs=47.8
Q ss_pred ceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCc-HHHHHHHHHhhhhcCCcEEEecCCcccch
Q 021898 49 VTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 49 i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~lk~~~p~~v~~LrGNHE~~~ 119 (306)
|+++||+||++..+.. ......+.|.+|++||++++|... .+.+..+.++ +..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHH
Confidence 5789999999998877 333445679999999999998753 3333333333 446999999999754
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.06 E-value=1.2e-08 Score=87.60 Aligned_cols=59 Identities=24% Similarity=0.362 Sum_probs=42.8
Q ss_pred cceEEecCC-CCHH-----HHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 48 PVTVCGDIH-GQFH-----DLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIH-G~~~-----~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
+|.||||.| |.-. .+.++++ ..+.+.++.+||+++ .+++.++..+. .++++++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~---~~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLV---PGKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhc---cCCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 5533 2444443 345789999999987 67777776652 2599999999973
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.93 E-value=1.1e-08 Score=81.00 Aligned_cols=117 Identities=23% Similarity=0.335 Sum_probs=82.9
Q ss_pred eEEecCCCCHHHHHHHH--HHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCCh
Q 021898 50 TVCGDIHGQFHDLVELF--RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~ 127 (306)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999998888765 44445667899999999999887776554422222233457999999999
Q ss_pred HHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCc
Q 021898 128 DECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (306)
Q Consensus 128 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~ 207 (306)
++++|+++.+...... +.
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~--------- 87 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PD--------- 87 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------cc---------
Confidence 8999997754321100 00
Q ss_pred cCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceE
Q 021898 208 ISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (306)
Q Consensus 208 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 246 (306)
.......+...+...+.+++|.||++....+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00145667788888899999999999866554
No 43
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.92 E-value=3e-08 Score=89.12 Aligned_cols=211 Identities=14% Similarity=0.131 Sum_probs=106.1
Q ss_pred CcceEEecCCCCH------HHHHHHHHHcCCCCCCeEEEeCCccCC-------CCCcHHHHHHHHHhhhhcCCcEEEecC
Q 021898 47 CPVTVCGDIHGQF------HDLVELFRIGGNAPDTNYLFMGDYVDR-------GYYSVETVTLLVALKVRYRDRITILRG 113 (306)
Q Consensus 47 ~~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDr-------G~~s~evl~~l~~lk~~~p~~v~~LrG 113 (306)
+++++|||+|... ..+.+.++.. ....+.++++||++|. .+...+++.++..++.. +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 4789999999542 2344444332 2357899999999985 22345667777777543 236999999
Q ss_pred CcccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCce-EEEeceEEEecCCCCCCCCCHHH-HHhhcccccCCCCCc
Q 021898 114 NHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLT-ALIESQVFCLHGGLSPSLDTLDN-IRALDRIQEVPHEGP 191 (306)
Q Consensus 114 NHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~-~~i~~~~l~vHgGi~p~~~~~~~-i~~i~r~~~~~~~~~ 191 (306)
|||..... ...+..+. ..+.. |.. .+-+.+++++||-.-+.-+..-+ .+.+-|.. .
T Consensus 79 NHD~~~~~-------~~~~~~g~--------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~------~ 136 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM--------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNP------W 136 (241)
T ss_pred CCchhhhH-------HHHHhCCC--------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCH------H
Confidence 99974321 11111111 11111 121 12245799999986543221111 22221110 0
Q ss_pred ccccccCCCCC-----CCCCcc-----CCCCCc--cccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecC
Q 021898 192 MCDLLWSDPDD-----RCGWGI-----SPRGAG--YTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSA 259 (306)
Q Consensus 192 ~~~llW~dp~~-----~~~~~~-----~~rg~g--~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa 259 (306)
+.-++-.-|.. ...+.. +..... ....++.+.+.+++.+++.+|.||++.+.-.....++.-++-.+-
T Consensus 137 ~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~l 216 (241)
T PRK05340 137 LQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVL 216 (241)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEe
Confidence 00000000000 000000 000111 223457788889999999999999998654433223211111111
Q ss_pred CCCcccCCCcEEEEEEcCCCceeEEEe
Q 021898 260 PNYCYRCGNMAAILEIGENMEQNFLQF 286 (306)
Q Consensus 260 ~~y~~~~~n~~avl~i~~~~~~~~~~~ 286 (306)
+. + ...+.++++++++ .++..+
T Consensus 217 gd---w-~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 217 GD---W-HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred CC---C-CCCCeEEEEECCc-eEEEeC
Confidence 11 1 2357888888864 555554
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.91 E-value=4.2e-09 Score=88.95 Aligned_cols=67 Identities=21% Similarity=0.182 Sum_probs=47.8
Q ss_pred ceEEecCCCCHHHHHHHH-HHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 49 VTVCGDIHGQFHDLVELF-RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 49 i~viGDIHG~~~~L~~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
+.++||+|++.......+ +.....+.+.++++||+++++....... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 478999999987776655 3334456788999999999887654443 22222 2244799999999986
No 45
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.90 E-value=5.4e-08 Score=85.96 Aligned_cols=193 Identities=15% Similarity=0.132 Sum_probs=104.4
Q ss_pred cceEEecCCCCHH----HH----HHHHHHcCCCCCCeEEEeCCccCCCCCcHH---HHHHHHHhhhhcCCcEEEecCCcc
Q 021898 48 PVTVCGDIHGQFH----DL----VELFRIGGNAPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 48 ~i~viGDIHG~~~----~L----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~e---vl~~l~~lk~~~p~~v~~LrGNHE 116 (306)
+++++||+|--.+ .+ ..+++.......+.+|++||+++.+....+ ....+..+.. .+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 5789999995222 22 334444444557899999999999884432 2233333321 1235899999999
Q ss_pred cchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccc
Q 021898 117 SRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (306)
Q Consensus 117 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~ll 196 (306)
.... -.+. ....-.+.+.+.++..|- ..-++++|--+.+.... .....
T Consensus 81 ~~~~-ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~------------------~~~~~ 128 (214)
T cd07399 81 LVLA-LEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSR------------------PDSID 128 (214)
T ss_pred chhh-CCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCc------------------Ccccc
Confidence 4221 1111 012233334444444331 13478899744321100 00000
Q ss_pred cCCCCCCCCCccCCCCCccccChhhHHhhhhhc-CCeEEEeeccccccceEEe----c-CCeEEEEecCCCCcccC-CCc
Q 021898 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTN-GLTLISRAHQLVMDGYNWC----Q-DKNVVTVFSAPNYCYRC-GNM 269 (306)
Q Consensus 197 W~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~-~~~~iIrGH~~~~~G~~~~----~-~~~~itifSa~~y~~~~-~n~ 269 (306)
|. .....+.+.+.+.++++ ++++++.||.+... .... . ++.+..+.+......+. +..
T Consensus 129 ~~--------------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 129 YD--------------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG-RTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred cc--------------cccccHHHHHHHHHhCCCCEEEEEccccCCCc-eEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 10 01123456677888888 79999999998643 2222 1 34455554442211111 123
Q ss_pred EEEEEEcCC-CceeEEEecC
Q 021898 270 AAILEIGEN-MEQNFLQFDP 288 (306)
Q Consensus 270 ~avl~i~~~-~~~~~~~~~~ 288 (306)
-.+++++++ .++.+.+|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 457777777 4888988876
No 46
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.87 E-value=7e-09 Score=84.42 Aligned_cols=143 Identities=48% Similarity=0.795 Sum_probs=114.3
Q ss_pred hhhhcCChHHHHHHhcChhhhHH---HHHHhhccCceEEEec-eEEEecCCCCCCC-CCHHHHHhhcccc--cCCCCCcc
Q 021898 120 ITQVYGFYDECLRKYGNANVWKH---FTDLFDYLPLTALIES-QVFCLHGGLSPSL-DTLDNIRALDRIQ--EVPHEGPM 192 (306)
Q Consensus 120 ~~~~~~f~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 192 (306)
+...+++..++...++....|.. ..++|+.+|+.++..+ .++|.|+++++.. ..++++..+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 34456666666666644334555 9999999999988877 8999999999865 6778888887776 66777777
Q ss_pred cccccCCCCC--CCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCc
Q 021898 193 CDLLWSDPDD--RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYC 263 (306)
Q Consensus 193 ~~llW~dp~~--~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~ 263 (306)
.+.+|+++.. ...|.++++|.+..+ .+....|...+..+.+.++|.....++.....+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 7779999884 688999999988766 678888887777777999999999998888776899999999886
No 47
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.87 E-value=1.4e-07 Score=82.67 Aligned_cols=192 Identities=19% Similarity=0.240 Sum_probs=118.2
Q ss_pred CCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCcc--CCCCCcHHHHHH--HHHhhhhcCCcEEEecCCcccchhh
Q 021898 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV--DRGYYSVETVTL--LVALKVRYRDRITILRGNHESRQIT 121 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v--DrG~~s~evl~~--l~~lk~~~p~~v~~LrGNHE~~~~~ 121 (306)
..++.+++|+||..+.+.++++.++....|.+++.||+. +.|+.- .+... +..++.. -..++.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-VAEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-HHHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 367999999999999999999999888899999999999 887732 22222 3333322 33799999999987653
Q ss_pred hhcC-----------------ChH---------HHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHH
Q 021898 122 QVYG-----------------FYD---------ECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLD 175 (306)
Q Consensus 122 ~~~~-----------------f~~---------e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~ 175 (306)
.... |.. .....|+.+.++......++..- -..+++..|+- |.-+.++
T Consensus 81 ~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~----~~~~Il~~HaP--P~gt~~d 154 (226)
T COG2129 81 DVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD----NPVNILLTHAP--PYGTLLD 154 (226)
T ss_pred HHHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc----CcceEEEecCC--CCCcccc
Confidence 2110 000 00011111112222221111110 00115555552 2111110
Q ss_pred HHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEE
Q 021898 176 NIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVT 255 (306)
Q Consensus 176 ~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~it 255 (306)
.+.|. ..-|..+++++.+..+-.+.++||-+...|+... ++ |
T Consensus 155 ---------------------------------~~~g~-~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i-G~---T 196 (226)
T COG2129 155 ---------------------------------TPSGY-VHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI-GN---T 196 (226)
T ss_pred ---------------------------------CCCCc-cccchHHHHHHHHHhCCceEEEeeeccccccccc-CC---e
Confidence 11121 2458999999999999999999999998888754 33 7
Q ss_pred EecCCCCcccCCCcEEEEEEcCCCceeEEEe
Q 021898 256 VFSAPNYCYRCGNMAAILEIGENMEQNFLQF 286 (306)
Q Consensus 256 ifSa~~y~~~~~n~~avl~i~~~~~~~~~~~ 286 (306)
|+-.|+-.+ ....|+++++++ .++..+|
T Consensus 197 ivVNPG~~~--~g~yA~i~l~~~-~Vk~~~~ 224 (226)
T COG2129 197 IVVNPGPLG--EGRYALIELEKE-VVKLEQF 224 (226)
T ss_pred EEECCCCcc--CceEEEEEecCc-EEEEEEe
Confidence 788887643 468899999887 5555555
No 48
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.81 E-value=4.8e-08 Score=79.49 Aligned_cols=107 Identities=19% Similarity=0.118 Sum_probs=74.9
Q ss_pred eEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHH
Q 021898 50 TVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e 129 (306)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+.+++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999997777776654 45679999999973 34555555541 225899999999
Q ss_pred HHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccC
Q 021898 130 CLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS 209 (306)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~ 209 (306)
-+++++|+-+.+... .+
T Consensus 57 ----------------------------~~Ilv~H~pp~~~~~-------------------------~~---------- 73 (129)
T cd07403 57 ----------------------------VDILLTHAPPAGIGD-------------------------GE---------- 73 (129)
T ss_pred ----------------------------cCEEEECCCCCcCcC-------------------------cc----------
Confidence 468999984321100 00
Q ss_pred CCCCccccChhhHHhhhhhcCCeEEEeeccccccceE
Q 021898 210 PRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (306)
Q Consensus 210 ~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 246 (306)
....-|.+.+.+++++.+.++++.||++.+..+.
T Consensus 74 ---~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 ---DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ---cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0012356777888888999999999999877665
No 49
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.78 E-value=1.2e-07 Score=77.94 Aligned_cols=117 Identities=21% Similarity=0.208 Sum_probs=76.5
Q ss_pred ceEEecCCCCHH------H----HHHHHHHcCCCCCCeEEEeCCccCCCCCc--HHHHHHHHHhhhhcCCcEEEecCCcc
Q 021898 49 VTVCGDIHGQFH------D----LVELFRIGGNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 49 i~viGDIHG~~~------~----L~~ll~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~LrGNHE 116 (306)
|+.++|+|=... . |.++++.....+.+.++++||+++.|... .+...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 568999994221 1 22344455556689999999999988742 12344454443221 26999999999
Q ss_pred cchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccc
Q 021898 117 SRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (306)
Q Consensus 117 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~ll 196 (306)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 7 88999865432100
Q ss_pred cCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceE
Q 021898 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (306)
Q Consensus 197 W~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 246 (306)
|. . ... +.+.+.+++++.++++++.||++....+.
T Consensus 95 ~~-----~---------~~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 GR-----E---------RLL-DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred cc-----c---------cCC-CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00 0 001 56678888999999999999999876554
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.75 E-value=2e-08 Score=89.71 Aligned_cols=207 Identities=12% Similarity=0.082 Sum_probs=98.7
Q ss_pred ceEEecCCCCH------HHHHHHHHHcCCCCCCeEEEeCCccCCC-----CC--cHHHHHHHHHhhhhcCCcEEEecCCc
Q 021898 49 VTVCGDIHGQF------HDLVELFRIGGNAPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYRDRITILRGNH 115 (306)
Q Consensus 49 i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~LrGNH 115 (306)
++++||+|... ..+.+.++.... ..+.++++||++|.. +. ..++...+..++.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999643 234444433222 578999999999952 11 13455666666433 34799999999
Q ss_pred ccchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCC-HHHHHhhccc-c------cCC
Q 021898 116 ESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDT-LDNIRALDRI-Q------EVP 187 (306)
Q Consensus 116 E~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~-~~~i~~i~r~-~------~~~ 187 (306)
|...-. ......+. ..+..--...+-+.+++++||-.-..-+. ....+..-|. . ..|
T Consensus 79 D~~~~~-------~~~~~~gi--------~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM--------TLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC--------EEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 00111110 11111111112256899999975431111 1111111111 0 000
Q ss_pred CC--CcccccccCCCCCCCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCccc
Q 021898 188 HE--GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYR 265 (306)
Q Consensus 188 ~~--~~~~~llW~dp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~ 265 (306)
.. ..+...+++....... .....-....++.+.+.++..+++++|.||++.+.-.....++.-.+-.+-...
T Consensus 144 ~~~r~~l~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW--- 217 (231)
T TIGR01854 144 LAVRVKLARKIRAESRADKQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW--- 217 (231)
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC---
Confidence 00 0011112221100000 000011223567788888999999999999998664544333321122222222
Q ss_pred CCCcEEEEEEcCCC
Q 021898 266 CGNMAAILEIGENM 279 (306)
Q Consensus 266 ~~n~~avl~i~~~~ 279 (306)
...+.++.+++++
T Consensus 218 -~~~~~~~~~~~~g 230 (231)
T TIGR01854 218 -YRQGSILRVDADG 230 (231)
T ss_pred -ccCCeEEEEcCCC
Confidence 1346677777654
No 51
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.67 E-value=1.7e-07 Score=83.99 Aligned_cols=68 Identities=19% Similarity=0.167 Sum_probs=50.0
Q ss_pred cceEEecCCCCH------HHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 48 PVTVCGDIHGQF------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIHG~~------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
++.++||+|.++ ..+.++++.+...+.+.+|++||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999763 23566777665566899999999999876555555555443 234699999999974
No 52
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.66 E-value=1.7e-06 Score=73.88 Aligned_cols=160 Identities=16% Similarity=0.178 Sum_probs=97.9
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCC
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f 126 (306)
+++.|+||.||...+..+..+.......+.+|.+||++.... +..+.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT-----LDALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc-----hHHhhc---ccccceEEEEccCCCcccc-----
Confidence 578999999999976566666666667899999999987644 222221 0134799999999974322
Q ss_pred hHHHHHHhcChhhhHHHHHHhhccCceEE--E-eceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCC
Q 021898 127 YDECLRKYGNANVWKHFTDLFDYLPLTAL--I-ESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDR 203 (306)
Q Consensus 127 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~--i-~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~ 203 (306)
..+|-..+ + +.+++++||..-.-.
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~-------------------------------- 95 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVK-------------------------------- 95 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCccccc--------------------------------
Confidence 22232211 2 358999999542110
Q ss_pred CCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCCCccc--CCCcEEEEEEcCC-Cc
Q 021898 204 CGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYR--CGNMAAILEIGEN-ME 280 (306)
Q Consensus 204 ~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~--~~n~~avl~i~~~-~~ 280 (306)
.....+..+.+..+.+.+|.|||+.+.=++. ++ +++-+|+-+.. .++..+++.++.+ .+
T Consensus 96 -------------~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~--~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~ 157 (172)
T COG0622 96 -------------TDLSLLEYLAKELGADVLIFGHTHKPVAEKV--GG---ILLVNPGSVSGPRGGNPASYAILDVDNLE 157 (172)
T ss_pred -------------cCHHHHHHHHHhcCCCEEEECCCCcccEEEE--CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCE
Confidence 1223345556667889999999998653322 33 34445554432 2244455656544 56
Q ss_pred eeEEEecCCC
Q 021898 281 QNFLQFDPAP 290 (306)
Q Consensus 281 ~~~~~~~~~~ 290 (306)
+....++...
T Consensus 158 ~~~~~~~~~~ 167 (172)
T COG0622 158 VEVLFLERDR 167 (172)
T ss_pred EEEEEeeccc
Confidence 6666665543
No 53
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.64 E-value=4.3e-06 Score=75.82 Aligned_cols=71 Identities=14% Similarity=-0.000 Sum_probs=44.6
Q ss_pred cceEEecCCCCHH----------------HHHHHHHHcCC--CCCCeEEEeCCccCCCCCcH---HHHHHHHH-hhhh-c
Q 021898 48 PVTVCGDIHGQFH----------------DLVELFRIGGN--APDTNYLFMGDYVDRGYYSV---ETVTLLVA-LKVR-Y 104 (306)
Q Consensus 48 ~i~viGDIHG~~~----------------~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~---evl~~l~~-lk~~-~ 104 (306)
+++++||+|-... .+.++++.+.. +..+.++++||+++.|.... +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 5788999997641 24555555543 36788999999999887542 11222222 2211 1
Q ss_pred CCcEEEecCCcccc
Q 021898 105 RDRITILRGNHESR 118 (306)
Q Consensus 105 p~~v~~LrGNHE~~ 118 (306)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 23699999999974
No 54
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.61 E-value=3e-07 Score=84.18 Aligned_cols=70 Identities=19% Similarity=0.154 Sum_probs=53.0
Q ss_pred CcceEEecCCCC----HHHHHHHHHHcCCCCCCeEEEeCCccCCC--CCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 47 CPVTVCGDIHGQ----FHDLVELFRIGGNAPDTNYLFMGDYVDRG--YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~----~~~L~~ll~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
.+++++||+|.. ...+.++++.....+.|.++++||++|++ ....++...+..++... .++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 579999999986 55677777776666788999999999954 23344666677676533 599999999974
No 55
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.60 E-value=6.7e-07 Score=79.71 Aligned_cols=67 Identities=25% Similarity=0.271 Sum_probs=46.7
Q ss_pred cceEEecCCCC------------HHHHHHHHHHcCCC--CCCeEEEeCCccCCCCCc--HHHHHHHHHhhhhcCCcEEEe
Q 021898 48 PVTVCGDIHGQ------------FHDLVELFRIGGNA--PDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 48 ~i~viGDIHG~------------~~~L~~ll~~~~~~--~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~L 111 (306)
|++++||+|=. ...+.++++.+... +.+.+|++||+++.|... ..++..+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 58899999954 34577777765443 678999999999987521 1233333333 4469999
Q ss_pred cCCcccc
Q 021898 112 RGNHESR 118 (306)
Q Consensus 112 rGNHE~~ 118 (306)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 56
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.52 E-value=1.6e-05 Score=72.79 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=47.4
Q ss_pred CcceEEecCC-C-----------CHHHHHHHHHHcCC--CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEec
Q 021898 47 CPVTVCGDIH-G-----------QFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILR 112 (306)
Q Consensus 47 ~~i~viGDIH-G-----------~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~Lr 112 (306)
.+++.|+|+| . ....|.++++.+.. ++.+.+|+.||+++.|. .+-+..+.+.-...+..+++++
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 5699999999 1 13567777765533 35688999999999874 2333333332223345799999
Q ss_pred CCcccc
Q 021898 113 GNHESR 118 (306)
Q Consensus 113 GNHE~~ 118 (306)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 57
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.50 E-value=5.3e-06 Score=75.66 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=49.9
Q ss_pred cceEEecCC-CC------------HHHHHHHHHHcCCCCCCeEEEeCCccCCCCC-cHHHHHHHHHhhhhcCCcEEEecC
Q 021898 48 PVTVCGDIH-GQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYRDRITILRG 113 (306)
Q Consensus 48 ~i~viGDIH-G~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~LrG 113 (306)
|+++|||+| +. ...+.++++.+...+.+.+|++||+++.|.. +.+-+..+.+.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 21 3556777776655568899999999998863 223343333332222346999999
Q ss_pred Ccccchh
Q 021898 114 NHESRQI 120 (306)
Q Consensus 114 NHE~~~~ 120 (306)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 58
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.43 E-value=2.8e-06 Score=75.99 Aligned_cols=65 Identities=22% Similarity=0.232 Sum_probs=41.3
Q ss_pred ceEEecCCCCH---------H----H-HHHHHHHcCC--CCCCeEEEeCCccCCCCCc--HHHHHHHHHhhhhcCCcEEE
Q 021898 49 VTVCGDIHGQF---------H----D-LVELFRIGGN--APDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITI 110 (306)
Q Consensus 49 i~viGDIHG~~---------~----~-L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~ 110 (306)
+++++|+|-.. . + +.++.+.... ++.|.+|+.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 57899999651 1 2 3333333222 3789999999999877532 2334444333 335899
Q ss_pred ecCCccc
Q 021898 111 LRGNHES 117 (306)
Q Consensus 111 LrGNHE~ 117 (306)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 59
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.38 E-value=6.6e-06 Score=71.58 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=44.9
Q ss_pred CcceEEecCCCCHH------------HHHHHHHHcCCCCCCeEEEeCCccCCCCCc---HHHHHHHHHhhhhcCCcEEEe
Q 021898 47 CPVTVCGDIHGQFH------------DLVELFRIGGNAPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 47 ~~i~viGDIHG~~~------------~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~L 111 (306)
.++++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 36899999996332 122222333345678999999999976653 445554444333223368999
Q ss_pred cCCcc
Q 021898 112 RGNHE 116 (306)
Q Consensus 112 rGNHE 116 (306)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 60
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.37 E-value=7e-07 Score=78.67 Aligned_cols=70 Identities=21% Similarity=0.170 Sum_probs=53.5
Q ss_pred CcceEEecCCCCHH----HHHHHHHHcCCCCCCeEEEeCCccCCCCCcH-HHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 47 CPVTVCGDIHGQFH----DLVELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~~~----~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
.+++++||+|+... .+.++++.+.....+.++++||++|.+.... ++..++..+.. +..++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCcccc
Confidence 47899999998744 6777777666666789999999999987664 55555555533 33699999999985
No 61
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.24 E-value=1.3e-05 Score=79.67 Aligned_cols=73 Identities=22% Similarity=0.314 Sum_probs=45.4
Q ss_pred CCcceEEecCC-CCH----HHHHHHHHHcC---------CCCCCeEEEeCCccCC-CCCc---------------HHHHH
Q 021898 46 KCPVTVCGDIH-GQF----HDLVELFRIGG---------NAPDTNYLFMGDYVDR-GYYS---------------VETVT 95 (306)
Q Consensus 46 ~~~i~viGDIH-G~~----~~L~~ll~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~ 95 (306)
+..++++||+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35699999999 542 23444444322 2345789999999994 3221 13444
Q ss_pred HHHHhhhhcCCcEEEecCCcccchh
Q 021898 96 LLVALKVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 96 ~l~~lk~~~p~~v~~LrGNHE~~~~ 120 (306)
+|.++.. .-.|++++||||....
T Consensus 323 ~L~~L~~--~i~V~~ipGNHD~~~~ 345 (504)
T PRK04036 323 YLKQIPE--DIKIIISPGNHDAVRQ 345 (504)
T ss_pred HHHhhhc--CCeEEEecCCCcchhh
Confidence 5555532 2269999999997543
No 62
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.19 E-value=7.9e-06 Score=72.35 Aligned_cols=198 Identities=16% Similarity=0.156 Sum_probs=102.3
Q ss_pred eEEecCCCC------HHHHHHHHHHcCCCCCCeEEEeCCccCC--CCC-----cHHHHHHHHHhhhhcCCcEEEecCCcc
Q 021898 50 TVCGDIHGQ------FHDLVELFRIGGNAPDTNYLFMGDYVDR--GYY-----SVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 50 ~viGDIHG~------~~~L~~ll~~~~~~~~~~~vfLGD~vDr--G~~-----s~evl~~l~~lk~~~p~~v~~LrGNHE 116 (306)
++|||+|=. .+.|.+.|+... +..+.++++||++|. |.+ -.+|...|..+.. ...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 478999965 333555555433 356889999999962 222 2234555544433 2458999999999
Q ss_pred cchhhhhcCChHHHHHHhcChhhhHHHHHHhhccCce---EEEeceEEEecCCCCCCCCC------------HHHHHhhc
Q 021898 117 SRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLT---ALIESQVFCLHGGLSPSLDT------------LDNIRALD 181 (306)
Q Consensus 117 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~lP~~---~~i~~~~l~vHgGi~p~~~~------------~~~i~~i~ 181 (306)
.. +...+ ....|. +.-+|-. ..-+++++++||..--.... +.+..-++
T Consensus 79 fl-l~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FL-LGKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HH-HHHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 53 32211 111111 1122211 22367899999965321100 00000000
Q ss_pred ccccCCCCCcccccccCCCCCCCCCccCCCCCc---cccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEec
Q 021898 182 RIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAG---YTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFS 258 (306)
Q Consensus 182 r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifS 258 (306)
.+... . .....-+|+. ..|........ ....++++.+-++++|++.+|+||++.+..-.+..-.+| +.
T Consensus 142 l~l~~-R-~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi--~l- 212 (237)
T COG2908 142 LPLRV-R-RRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYI--NL- 212 (237)
T ss_pred hHHHH-H-HHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEE--ec-
Confidence 00000 0 0011224442 12322221111 124567788889999999999999998776554321111 11
Q ss_pred CCCCcccCCCcEEEEEEcCCCc
Q 021898 259 APNYCYRCGNMAAILEIGENME 280 (306)
Q Consensus 259 a~~y~~~~~n~~avl~i~~~~~ 280 (306)
+.....+++++++++..
T Consensus 213 -----GdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 213 -----GDWVSEGSILEVDDGGL 229 (237)
T ss_pred -----CcchhcceEEEEecCcE
Confidence 11126789999988755
No 63
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.18 E-value=2.3e-06 Score=75.07 Aligned_cols=29 Identities=7% Similarity=0.017 Sum_probs=22.7
Q ss_pred ChhhHHhhhhhcCCeEEEeeccccccceE
Q 021898 218 GQDIASQFNHTNGLTLISRAHQLVMDGYN 246 (306)
Q Consensus 218 g~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 246 (306)
....+.+.++..+++.+|.||++.+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 45567777888999999999999865443
No 64
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.13 E-value=3.3e-05 Score=70.09 Aligned_cols=71 Identities=18% Similarity=0.082 Sum_probs=43.6
Q ss_pred ceEEecCCCCHH------HH-HHHHHHcCCCCCCeEEEeCCccCCCCCc--------H---HHHHHHHHhhhhcCCcEEE
Q 021898 49 VTVCGDIHGQFH------DL-VELFRIGGNAPDTNYLFMGDYVDRGYYS--------V---ETVTLLVALKVRYRDRITI 110 (306)
Q Consensus 49 i~viGDIHG~~~------~L-~~ll~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~lk~~~p~~v~~ 110 (306)
++.++|+|-... .. ..+++.+...+.+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 568999996322 12 3344555555678999999999976521 1 2222222222222457899
Q ss_pred ecCCcccch
Q 021898 111 LRGNHESRQ 119 (306)
Q Consensus 111 LrGNHE~~~ 119 (306)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 65
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.11 E-value=3.3e-05 Score=76.72 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=39.0
Q ss_pred CCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhh
Q 021898 73 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQIT 121 (306)
Q Consensus 73 ~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~ 121 (306)
-.|++-.+||+.||||.+-.+++.|+.. + .|-+-.||||--++.
T Consensus 184 ~VDhLHIvGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 184 AVDHLHIVGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWMG 227 (640)
T ss_pred hhhheeecccccCCCCChhHHHHHHhcC----C-CccccccchHHHHHH
Confidence 4688999999999999999999999976 3 788999999997764
No 66
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.06 E-value=3.9e-05 Score=67.52 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=45.1
Q ss_pred CCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHH-------------------------HHHHHh
Q 021898 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETV-------------------------TLLVAL 100 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl-------------------------~~l~~l 100 (306)
..+|.+++|.||+++.+.++.+.+.....|-++|+||++-....+.|-. +-++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3569999999999999999998887778899999999986544333322 222222
Q ss_pred hhhcCCcEEEecCCcccchh
Q 021898 101 KVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 101 k~~~p~~v~~LrGNHE~~~~ 120 (306)
.....-.+++++||||....
T Consensus 85 L~~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HHCC-SEEEEE--TTS-SHH
T ss_pred HHhcCCcEEEecCCCCchHH
Confidence 22233479999999999543
No 67
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.05 E-value=0.00016 Score=65.80 Aligned_cols=72 Identities=19% Similarity=0.243 Sum_probs=51.1
Q ss_pred cceEEecCCCC------HHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhh--hcCCcEEEecCCcccch
Q 021898 48 PVTVCGDIHGQ------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYRDRITILRGNHESRQ 119 (306)
Q Consensus 48 ~i~viGDIHG~------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~--~~p~~v~~LrGNHE~~~ 119 (306)
+++.|+|+|-. ...+.++++.....+.|.+|+.||+.+.|. . +-+..+..+-. ..+..++.++||||.+.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~-~-~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE-P-EEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC-H-HHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 68899999987 334666667777777799999999999964 2 22222222222 44667999999999976
Q ss_pred hh
Q 021898 120 IT 121 (306)
Q Consensus 120 ~~ 121 (306)
..
T Consensus 80 ~~ 81 (301)
T COG1409 80 VN 81 (301)
T ss_pred hH
Confidence 54
No 68
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.02 E-value=5.6e-05 Score=63.46 Aligned_cols=48 Identities=21% Similarity=0.274 Sum_probs=30.9
Q ss_pred CCCCCeEEEeCCccCCCCCcH-HHH-HHHHHhhhh---c-CCcEEEecCCcccc
Q 021898 71 NAPDTNYLFMGDYVDRGYYSV-ETV-TLLVALKVR---Y-RDRITILRGNHESR 118 (306)
Q Consensus 71 ~~~~~~~vfLGD~vDrG~~s~-evl-~~l~~lk~~---~-p~~v~~LrGNHE~~ 118 (306)
..+.+.+|++||+++.+.... +.. ..+..++.. . ...+++++||||..
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 456789999999999876422 222 223333222 1 23699999999974
No 69
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.01 E-value=1.5e-05 Score=72.29 Aligned_cols=72 Identities=21% Similarity=0.199 Sum_probs=49.8
Q ss_pred CcceEEecCCCC------------HHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHH----HHHHHhhhhcCCcEEE
Q 021898 47 CPVTVCGDIHGQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYRDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~ 110 (306)
++++.++|+|-. ...|.++++.+.....|.+++.||++|+...+.+.. .++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 468999999942 234556666555566899999999999876554432 3444444333346999
Q ss_pred ecCCcccc
Q 021898 111 LRGNHESR 118 (306)
Q Consensus 111 LrGNHE~~ 118 (306)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999984
No 70
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.93 E-value=4.1e-05 Score=65.18 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCCCCeEEEeCCccCCCCCcH-HHHHH--HHHhhhhcCCcEEEecCCcccc
Q 021898 62 LVELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTL--LVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 62 L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~--l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
+.++.+.....+.+.+|++||+++...... +.... +..+ ...+-.+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccc
Confidence 344455555556799999999998654322 21211 1122 12234799999999984
No 71
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.91 E-value=5.2e-05 Score=69.68 Aligned_cols=70 Identities=20% Similarity=0.174 Sum_probs=43.0
Q ss_pred CcceEEecCCCC----HHHHHHHHHHcCCCCCCeEEEeCCccCCCCCc-----HHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 47 CPVTVCGDIHGQ----FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 47 ~~i~viGDIHG~----~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
-+++++||.|.. ...+.++.+. ....+.++++||+++.+... -..+..+..+.... .++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCccccc
Confidence 468999999952 2223333332 35678899999999544322 22233333332333 48999999998
Q ss_pred chh
Q 021898 118 RQI 120 (306)
Q Consensus 118 ~~~ 120 (306)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 72
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.88 E-value=3.1e-05 Score=73.24 Aligned_cols=72 Identities=19% Similarity=0.289 Sum_probs=48.9
Q ss_pred CcceEEecCC-C-----------CHHHHHHHHHHcCCCCCCeEEEeCCccCCC-CCcHHHHHHHHH--hh--hhcCCcEE
Q 021898 47 CPVTVCGDIH-G-----------QFHDLVELFRIGGNAPDTNYLFMGDYVDRG-YYSVETVTLLVA--LK--VRYRDRIT 109 (306)
Q Consensus 47 ~~i~viGDIH-G-----------~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--lk--~~~p~~v~ 109 (306)
++++.+||+| | ....|.++++.+...+.+.+++.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 4789999999 3 123455666666566779999999999985 445555444433 11 12234699
Q ss_pred EecCCcccc
Q 021898 110 ILRGNHESR 118 (306)
Q Consensus 110 ~LrGNHE~~ 118 (306)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 73
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.87 E-value=3.3e-05 Score=67.64 Aligned_cols=73 Identities=23% Similarity=0.217 Sum_probs=49.4
Q ss_pred cceEEecCCCC-H--------------HHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhc---CCcEE
Q 021898 48 PVTVCGDIHGQ-F--------------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY---RDRIT 109 (306)
Q Consensus 48 ~i~viGDIHG~-~--------------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~---p~~v~ 109 (306)
+++.++|+|=. . ..|.++++.+.....+.+|++||+++....+.+.+..+....... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 57899999932 1 236666666656667899999999998765554433333322211 34699
Q ss_pred EecCCcccchh
Q 021898 110 ILRGNHESRQI 120 (306)
Q Consensus 110 ~LrGNHE~~~~ 120 (306)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 74
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.84 E-value=4.4e-05 Score=64.79 Aligned_cols=67 Identities=27% Similarity=0.396 Sum_probs=45.2
Q ss_pred ceEEecCCCCHHHH---------------HHHHHHcC--CCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEe
Q 021898 49 VTVCGDIHGQFHDL---------------VELFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 49 i~viGDIHG~~~~L---------------~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~L 111 (306)
++++||+|=..... .++++... ..+.+.+|++||++++|..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47899999765532 22333222 2356899999999999986543 4444444 4469999
Q ss_pred cCCcccchh
Q 021898 112 RGNHESRQI 120 (306)
Q Consensus 112 rGNHE~~~~ 120 (306)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997543
No 75
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.72 E-value=0.00011 Score=65.61 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=44.9
Q ss_pred CcceEEecCC-CCHHH----------------HHHHHHHcCCCCCCeEEEeCCccCCCCCc---HHHHHHHHHhhhhcCC
Q 021898 47 CPVTVCGDIH-GQFHD----------------LVELFRIGGNAPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYRD 106 (306)
Q Consensus 47 ~~i~viGDIH-G~~~~----------------L~~ll~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~ 106 (306)
.+..+|+|+| |--.. |.++.+.....+.+.+|++||+.+..... .++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6799999999 53222 22333344445679999999999755542 2333344433 23
Q ss_pred cEEEecCCcccch
Q 021898 107 RITILRGNHESRQ 119 (306)
Q Consensus 107 ~v~~LrGNHE~~~ 119 (306)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 76
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.71 E-value=8.3e-05 Score=67.74 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=45.2
Q ss_pred ceEEecCCCCHHHHHHHHHHc---CCCCCCeEEEeCCccCCCCC-cHHHH----------HHHHHh--hhhcCCcEEEec
Q 021898 49 VTVCGDIHGQFHDLVELFRIG---GNAPDTNYLFMGDYVDRGYY-SVETV----------TLLVAL--KVRYRDRITILR 112 (306)
Q Consensus 49 i~viGDIHG~~~~L~~ll~~~---~~~~~~~~vfLGD~vDrG~~-s~evl----------~~l~~l--k~~~p~~v~~Lr 112 (306)
|+|+||+||+++.+.+.++.. ...+.|.+|++||+-..+.. ..+.+ ++..-+ ....|-.++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999887655432 23568999999999654432 22222 111111 223465679999
Q ss_pred CCcccc
Q 021898 113 GNHESR 118 (306)
Q Consensus 113 GNHE~~ 118 (306)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 77
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.59 E-value=0.00019 Score=69.30 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=56.7
Q ss_pred CcceEEecCCCC------------HHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhh-----------
Q 021898 47 CPVTVCGDIHGQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVR----------- 103 (306)
Q Consensus 47 ~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~----------- 103 (306)
.+|++++|+|-. +..|.++++.+.....|.+++.||++|+..-|.+++..++++...
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 579999999953 456788888887777899999999999998888877554443322
Q ss_pred -------------------------cCCcEEEecCCcccch
Q 021898 104 -------------------------YRDRITILRGNHESRQ 119 (306)
Q Consensus 104 -------------------------~p~~v~~LrGNHE~~~ 119 (306)
..-.|+++-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1226999999999964
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.57 E-value=0.00057 Score=57.05 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=80.7
Q ss_pred eEEecCCCCHHHHHHHHHHcC--CCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCCh
Q 021898 50 TVCGDIHGQFHDLVELFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~ 127 (306)
.|+||+||+++.+.+-++... ..+-|.++++||+..-.... +-+.-.+.=.+..|-..+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999887776532 24578899999998765554 3344444445566778999999998
Q ss_pred HHHHHHhcChhhhHHHHHHhhccCceEEEeceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCc
Q 021898 128 DECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (306)
Q Consensus 128 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~ 207 (306)
.-++|++|.-+. .....++. ..
T Consensus 69 -----------------------------~~DILlTh~wP~-gi~~~~~~-------------------~~--------- 90 (150)
T cd07380 69 -----------------------------GVDILLTSEWPK-GISKLSKV-------------------PF--------- 90 (150)
T ss_pred -----------------------------CCCEEECCCCch-hhhhhCCC-------------------cc---------
Confidence 346898986331 11000000 00
Q ss_pred cCCCCCccccChhhHHhhhhhcCCeEEEeecccc
Q 021898 208 ISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLV 241 (306)
Q Consensus 208 ~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~ 241 (306)
...+..-|...++++++...-++.+.||..+
T Consensus 91 ---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 91 ---EETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ---cccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 0112345889999999999999999999864
No 79
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.44 E-value=0.0019 Score=56.19 Aligned_cols=49 Identities=18% Similarity=0.317 Sum_probs=36.1
Q ss_pred CCCCCCeEEEeCCccCCCCCc--HHHHHHHHHhhhhcC----CcEEEecCCcccc
Q 021898 70 GNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYR----DRITILRGNHESR 118 (306)
Q Consensus 70 ~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p----~~v~~LrGNHE~~ 118 (306)
.....+.+|||||++|.|+.+ .+..+.+.+++..++ ..+++|.||||.-
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 345689999999999999954 336666666654432 2688999999973
No 80
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.42 E-value=0.00029 Score=68.24 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=48.0
Q ss_pred CcceEEecCCCCH--------HH----HHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHH----HHHHHhhhhcCCcEEE
Q 021898 47 CPVTVCGDIHGQF--------HD----LVELFRIGGNAPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYRDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG~~--------~~----L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~ 110 (306)
++++.++|+|-.. .+ +..+++.+.....|.+|+.||++|++..+.... .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 3689999999421 11 334555555567899999999999986554332 334444432 336999
Q ss_pred ecCCcccch
Q 021898 111 LRGNHESRQ 119 (306)
Q Consensus 111 LrGNHE~~~ 119 (306)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 81
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.42 E-value=0.0079 Score=54.69 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=31.0
Q ss_pred CccCCCCCcc----ccChhhHHhhhhhcCCeEEEeeccccccceEEecC
Q 021898 206 WGISPRGAGY----TFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQD 250 (306)
Q Consensus 206 ~~~~~rg~g~----~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~ 250 (306)
+.+.+.+.|+ .-.++..+..|+..+-.+|.-||++ +++++.+.
T Consensus 188 ~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h~ 234 (257)
T cd08163 188 KTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDH--DYCEVVHE 234 (257)
T ss_pred CCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCC--ccceeEcc
Confidence 3444444443 3467889999999999999999996 56666543
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.31 E-value=0.00046 Score=63.62 Aligned_cols=72 Identities=21% Similarity=0.192 Sum_probs=51.6
Q ss_pred CcceEEecCCCCHHH--HHHHHHHcCCCCCCeEEEeCCccCC--CCCcHHHHHHHHHhhhhcCCcEEEecCCcccchh
Q 021898 47 CPVTVCGDIHGQFHD--LVELFRIGGNAPDTNYLFMGDYVDR--GYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 47 ~~i~viGDIHG~~~~--L~~ll~~~~~~~~~~~vfLGD~vDr--G~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~ 120 (306)
-+|+.++|+|-.... ..+.+........|-+++.||++|+ -+....+...+..|+..+ .++.+.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEecccccccc
Confidence 469999999987655 3333433333344999999999995 445555777777776644 69999999987543
No 83
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.31 E-value=0.00041 Score=62.31 Aligned_cols=68 Identities=21% Similarity=0.268 Sum_probs=40.2
Q ss_pred eEEecCC--CCH---HHHHHHHHHcCCC-----CCCeEEEeCCccCCCCC------------c----HHHHHHHHHhhhh
Q 021898 50 TVCGDIH--GQF---HDLVELFRIGGNA-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 103 (306)
Q Consensus 50 ~viGDIH--G~~---~~L~~ll~~~~~~-----~~~~~vfLGD~vDrG~~------------s----~evl~~l~~lk~~ 103 (306)
++|||+| +.. ..+..+++..... ..+.+|++||++|+... . .++..++.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 331 2233444432222 34889999999997310 0 123334444432
Q ss_pred cCCcEEEecCCcccch
Q 021898 104 YRDRITILRGNHESRQ 119 (306)
Q Consensus 104 ~p~~v~~LrGNHE~~~ 119 (306)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 236999999999853
No 84
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.17 E-value=0.0012 Score=54.88 Aligned_cols=66 Identities=20% Similarity=0.216 Sum_probs=43.6
Q ss_pred ceEEecCCC------------CHHHHHHHH-HHcC--CCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecC
Q 021898 49 VTVCGDIHG------------QFHDLVELF-RIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRG 113 (306)
Q Consensus 49 i~viGDIHG------------~~~~L~~ll-~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrG 113 (306)
++++||.|= +.+....++ +... ..++|.+++|||+.-.--.-.+...++.+| +.++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 678888884 344444333 2211 256899999999975433344455555555 789999999
Q ss_pred Ccccc
Q 021898 114 NHESR 118 (306)
Q Consensus 114 NHE~~ 118 (306)
|||-.
T Consensus 82 NhDk~ 86 (186)
T COG4186 82 NHDKC 86 (186)
T ss_pred CCCCC
Confidence 99974
No 85
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=97.07 E-value=0.005 Score=59.26 Aligned_cols=42 Identities=26% Similarity=0.427 Sum_probs=36.3
Q ss_pred CCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchh
Q 021898 74 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 74 ~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~ 120 (306)
.|++=.+||+.||||++-.+++-|... + .+-+-.||||--++
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEEe
Confidence 577888999999999999999998877 3 67788999998765
No 86
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=97.01 E-value=0.0016 Score=50.00 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=35.5
Q ss_pred CChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeeee
Q 021898 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPV 45 (306)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~~ 45 (306)
.|.+.++.|++.|++++.|+...+..|+.++.++|+++|+++++
T Consensus 52 it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 52 ITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp --HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 47788999999999999999999999999999999999999975
No 87
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.98 E-value=0.0016 Score=55.44 Aligned_cols=52 Identities=21% Similarity=0.179 Sum_probs=33.3
Q ss_pred HcCCCCCCeEEEeCCccCCCCCcH--H---HHHHHHHhhhhc-----CCcEEEecCCcccch
Q 021898 68 IGGNAPDTNYLFMGDYVDRGYYSV--E---TVTLLVALKVRY-----RDRITILRGNHESRQ 119 (306)
Q Consensus 68 ~~~~~~~~~~vfLGD~vDrG~~s~--e---vl~~l~~lk~~~-----p~~v~~LrGNHE~~~ 119 (306)
.....+.+.+|++||++|.+.... + .+..+.++.... ...++.++||||...
T Consensus 40 ~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 40 ALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 344556789999999999887432 2 233333321111 346999999999853
No 88
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.95 E-value=0.017 Score=47.61 Aligned_cols=120 Identities=23% Similarity=0.365 Sum_probs=81.8
Q ss_pred ceEEecCCC--CHHHHHHHHHHcCCCC-CCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcC
Q 021898 49 VTVCGDIHG--QFHDLVELFRIGGNAP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 49 i~viGDIHG--~~~~L~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~ 125 (306)
+.++||+|= +..+|-.-|++.-.|. -.+++++|++. +.|.+++|..+ ..+++++||-.|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 678999995 4455666666554554 47899999975 45899999888 45899999987763
Q ss_pred ChHHHHHHhcChhhhHHHHHHhhccCceEEE--e-ceEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC
Q 021898 126 FYDECLRKYGNANVWKHFTDLFDYLPLTALI--E-SQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD 202 (306)
Q Consensus 126 f~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i--~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~ 202 (306)
.+| |..-++ + -++-+|||-- -+-|+||
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~-- 96 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP-- 96 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcE--------------------------eecCCCH--
Confidence 222 322222 2 2789999842 1446653
Q ss_pred CCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeE
Q 021898 203 RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNV 253 (306)
Q Consensus 203 ~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~ 253 (306)
+++.-.-++.+++.++-|||+..+-|+. +|+.
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~--eg~f 128 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH--EGKF 128 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe--CCcE
Confidence 3455556678999999999998776654 4543
No 89
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.85 E-value=0.0032 Score=60.51 Aligned_cols=74 Identities=22% Similarity=0.252 Sum_probs=53.5
Q ss_pred CcceEEecCCCC-------------HHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcC---CcEEE
Q 021898 47 CPVTVCGDIHGQ-------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR---DRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG~-------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p---~~v~~ 110 (306)
+|++.++|.|=. +.+|..+++.+.....|.+|+-||+.|+..-|.+++..+.+...... -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 368889999965 34456666777666779999999999998777776555444322212 26999
Q ss_pred ecCCcccchh
Q 021898 111 LRGNHESRQI 120 (306)
Q Consensus 111 LrGNHE~~~~ 120 (306)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999999654
No 90
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.84 E-value=0.0025 Score=57.19 Aligned_cols=66 Identities=27% Similarity=0.345 Sum_probs=43.5
Q ss_pred cceEEecCCCCH---------HHHHHHHHHcCCCCCC-eEEEeCCccCCCCCcH-----HHHHHHHHhhhhcCCcEEEec
Q 021898 48 PVTVCGDIHGQF---------HDLVELFRIGGNAPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYRDRITILR 112 (306)
Q Consensus 48 ~i~viGDIHG~~---------~~L~~ll~~~~~~~~~-~~vfLGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~Lr 112 (306)
+|+.++|+||.+ ..+.++++.......+ .++..||+++.++.+. .++..+..+ .-.+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 578999999876 4566667655443344 5567899999877543 455555544 2233 456
Q ss_pred CCcccc
Q 021898 113 GNHESR 118 (306)
Q Consensus 113 GNHE~~ 118 (306)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 91
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.77 E-value=0.018 Score=52.99 Aligned_cols=72 Identities=21% Similarity=0.214 Sum_probs=43.5
Q ss_pred ceEEecCCCC--HHHHHHHHHHcCC--CCCCeEEEeCCccCCCCCcH--H------HHHHHHHhhhhcCC-cEEEecCCc
Q 021898 49 VTVCGDIHGQ--FHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYRD-RITILRGNH 115 (306)
Q Consensus 49 i~viGDIHG~--~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~lk~~~p~-~v~~LrGNH 115 (306)
..-.|+-.-+ ...+..+++.+.. ++.+.+|+.||+++.+.... + .-.+...++..+|. .|+.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 3445655422 3445566655443 47889999999998876421 1 12223334434443 799999999
Q ss_pred ccchh
Q 021898 116 ESRQI 120 (306)
Q Consensus 116 E~~~~ 120 (306)
|....
T Consensus 120 D~~p~ 124 (296)
T cd00842 120 DSYPV 124 (296)
T ss_pred CCCcc
Confidence 98654
No 92
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.33 E-value=0.014 Score=52.05 Aligned_cols=71 Identities=20% Similarity=0.236 Sum_probs=45.5
Q ss_pred CCcceEEecCCCCHHHHH----------------HHHH-HcCCCCCCeEEEeCCccCCCCC-----cHHHHHHHHHhhhh
Q 021898 46 KCPVTVCGDIHGQFHDLV----------------ELFR-IGGNAPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVR 103 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~L~----------------~ll~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~ 103 (306)
..+..|++|+|=.++.-. +.+. .......+++|++||+-.-.+. ..++-.++..++.
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~- 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE- 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc-
Confidence 478999999997666433 2222 2334567899999999754332 2333333333332
Q ss_pred cCCcEEEecCCcccch
Q 021898 104 YRDRITILRGNHESRQ 119 (306)
Q Consensus 104 ~p~~v~~LrGNHE~~~ 119 (306)
. .+++++||||...
T Consensus 98 ~--evi~i~GNHD~~i 111 (235)
T COG1407 98 R--EVIIIRGNHDNGI 111 (235)
T ss_pred C--cEEEEeccCCCcc
Confidence 2 5999999999854
No 93
>PLN02533 probable purple acid phosphatase
Probab=96.26 E-value=0.0062 Score=59.43 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=43.4
Q ss_pred CCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcH---HHHHHHHHhhhhcCCcEEEecCCcccch
Q 021898 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~lk~~~p~~v~~LrGNHE~~~ 119 (306)
.-+++++||+|-. ......++.+.....+.++++||+++.+.... +-..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 3469999999632 22233444444456788999999997543321 12233333333334 889999999864
No 94
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.23 E-value=0.067 Score=52.18 Aligned_cols=213 Identities=16% Similarity=0.147 Sum_probs=103.8
Q ss_pred cceEEecCCC-CHHH----HHHHHHHcCCC----CCCe-EEEeCCccCCC-C-----------CcHHHHHHHHHhhhhcC
Q 021898 48 PVTVCGDIHG-QFHD----LVELFRIGGNA----PDTN-YLFMGDYVDRG-Y-----------YSVETVTLLVALKVRYR 105 (306)
Q Consensus 48 ~i~viGDIHG-~~~~----L~~ll~~~~~~----~~~~-~vfLGD~vDrG-~-----------~s~evl~~l~~lk~~~p 105 (306)
.+++++|+|= .-.- +...++-+..+ ..-+ ++..||.||.. - +..+-++.+..+..+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4899999995 2222 22233322221 2224 55578999942 1 33344555555555556
Q ss_pred C--cEEEecCCcccchhhhhcCChHH-HHHHhcChhhhHHHHHHhhccCceEEE-eceEEEecCCCCCCCCCHHHHHhhc
Q 021898 106 D--RITILRGNHESRQITQVYGFYDE-CLRKYGNANVWKHFTDLFDYLPLTALI-ESQVFCLHGGLSPSLDTLDNIRALD 181 (306)
Q Consensus 106 ~--~v~~LrGNHE~~~~~~~~~f~~e-~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~~~~~i~~i~ 181 (306)
. .|++.+||||..-.........+ ....|. ..+-.|=.=|...-+ +.+++..|| .+++++...-
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~------~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~v 374 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSLFS------LNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLV 374 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhccccc------ccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhC
Confidence 6 67889999999665443332222 222221 111111112322222 447899998 2455543322
Q ss_pred cccc--CCCCCcccccccCCCCC----CCCCccCCCCCccccChhhHHhhhhhcCCeEEEeeccccccceEEecCCeEEE
Q 021898 182 RIQE--VPHEGPMCDLLWSDPDD----RCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVT 255 (306)
Q Consensus 182 r~~~--~~~~~~~~~llW~dp~~----~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~it 255 (306)
.... .+..-+.+-+.|..-.. .....|.+. .+. ++++ --++++.||++. .|+....+.+++.
T Consensus 375 P~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~k--D~l----VIee-----vPDv~~~Ghvh~-~g~~~y~gv~~vn 442 (481)
T COG1311 375 PGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETK--DYL----VIEE-----VPDVFHTGHVHK-FGTGVYEGVNLVN 442 (481)
T ss_pred CCCCccchHHHHHHHHHhcccCCCCCCccccccCCc--Cce----eecc-----CCcEEEEccccc-cceeEEeccceEE
Confidence 1111 11111111223332110 001111110 000 0111 237889999998 7888777888888
Q ss_pred EecCCCCcccCCCcEEEEEEcCC-CceeEEEecC
Q 021898 256 VFSAPNYCYRCGNMAAILEIGEN-MEQNFLQFDP 288 (306)
Q Consensus 256 ifSa~~y~~~~~n~~avl~i~~~-~~~~~~~~~~ 288 (306)
.+|.+.+. -.+-++.|++. +.+....+..
T Consensus 443 s~T~q~qT----efqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 443 SGTWQEQT----EFQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred eeeecchh----ccceEEEecCcccceeEEeccc
Confidence 88888774 24566666665 3455555444
No 95
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.21 E-value=0.0088 Score=54.69 Aligned_cols=66 Identities=20% Similarity=0.282 Sum_probs=40.4
Q ss_pred cceEEecCCCCH----------------HHHHHHHHHcCCCCCCeEEE-eCCccCCCCCc-----------HHHHHHHHH
Q 021898 48 PVTVCGDIHGQF----------------HDLVELFRIGGNAPDTNYLF-MGDYVDRGYYS-----------VETVTLLVA 99 (306)
Q Consensus 48 ~i~viGDIHG~~----------------~~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 99 (306)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 478899999986 33556665554333444544 79999865521 235555555
Q ss_pred hhhhcCCcEEEecCCcccc
Q 021898 100 LKVRYRDRITILRGNHESR 118 (306)
Q Consensus 100 lk~~~p~~v~~LrGNHE~~ 118 (306)
+. . . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 52 2 3 4456999963
No 96
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=96.12 E-value=0.0023 Score=61.95 Aligned_cols=114 Identities=13% Similarity=0.035 Sum_probs=97.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeeeC-C---cceEEecCCCCHHHHHHHHHHcCCCC-CCeEEEeCCccCCCCCcHHH
Q 021898 19 PLPEQEVNILCEQARAILVEEWNVQPVK-C---PVTVCGDIHGQFHDLVELFRIGGNAP-DTNYLFMGDYVDRGYYSVET 93 (306)
Q Consensus 19 ~~~~~~~~~l~~~~~~il~~e~~~~~~~-~---~i~viGDIHG~~~~L~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~ev 93 (306)
.|...++..+++-+.+++..+||..... . -.+.++|.||...|+.+.++.. |. .--|++=|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4778889999999999999999887774 2 3889999999999999888754 33 34488899999999999999
Q ss_pred HHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHh
Q 021898 94 VTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKY 134 (306)
Q Consensus 94 l~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~ 134 (306)
+..+...+...|++..+.|++||...+-..++|..+....+
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 99999999999999999999999998888888876666555
No 97
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.06 E-value=0.016 Score=50.29 Aligned_cols=64 Identities=16% Similarity=0.215 Sum_probs=41.3
Q ss_pred cCCCCHHHHHHHHHHcC-CCCCCeEEEeCCccCCCCCcH-HHHHHHHHhhhhc---------------------CCcEEE
Q 021898 54 DIHGQFHDLVELFRIGG-NAPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRY---------------------RDRITI 110 (306)
Q Consensus 54 DIHG~~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~---------------------p~~v~~ 110 (306)
|++|+=.=|.++++.+. ....+.++||||++|.|--+- |-.....+.+..+ .-.++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55665555777776543 356899999999999875332 2233444443332 135688
Q ss_pred ecCCccc
Q 021898 111 LRGNHES 117 (306)
Q Consensus 111 LrGNHE~ 117 (306)
|.||||.
T Consensus 104 V~GNHDI 110 (193)
T cd08164 104 IAGNHDV 110 (193)
T ss_pred ECCcccC
Confidence 9999998
No 98
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.69 E-value=0.026 Score=51.29 Aligned_cols=69 Identities=20% Similarity=0.220 Sum_probs=41.1
Q ss_pred cceEEecCCCC--H--HHHHHH-HHHcCCCCCCeEEEeCCcc-CCCCCcH------HHHHHHHH-hhhhcCCcEEEecCC
Q 021898 48 PVTVCGDIHGQ--F--HDLVEL-FRIGGNAPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYRDRITILRGN 114 (306)
Q Consensus 48 ~i~viGDIHG~--~--~~L~~l-l~~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-lk~~~p~~v~~LrGN 114 (306)
+++++||.-.. . .++.+. .+.+...+.+.+|++||++ +-|.... +.+..++. +. ..-.++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~--~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPS--LQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchh--hcCCeEEecCC
Confidence 57899998764 1 233333 3344445678899999997 5554221 22222222 21 12359999999
Q ss_pred cccc
Q 021898 115 HESR 118 (306)
Q Consensus 115 HE~~ 118 (306)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9986
No 99
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.33 E-value=0.037 Score=50.10 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=40.9
Q ss_pred cceEEecCCCCH----------HHHHHHHHHcCCCCCCeEEEeCCccCCCCCc-----HHHHHHHHHhhhhcCCcEEEec
Q 021898 48 PVTVCGDIHGQF----------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILR 112 (306)
Q Consensus 48 ~i~viGDIHG~~----------~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~Lr 112 (306)
+++.++|+||++ ..+..+++.....+...++..||.++..+.+ ..++..+..+. -.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 478899999974 3455666554333455666689999876532 23444444442 144 456
Q ss_pred CCcccc
Q 021898 113 GNHESR 118 (306)
Q Consensus 113 GNHE~~ 118 (306)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 100
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.92 E-value=0.035 Score=51.21 Aligned_cols=66 Identities=24% Similarity=0.379 Sum_probs=41.8
Q ss_pred cceEEecCCCCHH--------------HHHHHHHHcCCC-CCCeEEEeCCccCCCCC-c-----HHHHHHHHHhhhhcCC
Q 021898 48 PVTVCGDIHGQFH--------------DLVELFRIGGNA-PDTNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYRD 106 (306)
Q Consensus 48 ~i~viGDIHG~~~--------------~L~~ll~~~~~~-~~~~~vfLGD~vDrG~~-s-----~evl~~l~~lk~~~p~ 106 (306)
+|+.++|+||++. .+..+++..... +...++..||++...+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 4788999999754 355666554332 34456668999976653 2 245666666532
Q ss_pred cEEEecCCcccc
Q 021898 107 RITILRGNHESR 118 (306)
Q Consensus 107 ~v~~LrGNHE~~ 118 (306)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 33 555999964
No 101
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.85 E-value=0.059 Score=46.06 Aligned_cols=44 Identities=25% Similarity=0.305 Sum_probs=34.7
Q ss_pred CCCCeEEEeCCcc--CCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccch
Q 021898 72 APDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 72 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~ 119 (306)
.++|.++.-||+- -|=+...+-+.++-+| |..-+++|||||...
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 4566677779984 4566677778888888 999999999999864
No 102
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=93.95 E-value=0.12 Score=49.65 Aligned_cols=71 Identities=20% Similarity=0.360 Sum_probs=47.7
Q ss_pred CcceEEecCC--CC---------HH------HHHHHHHHcC-CCCCCeEEEeCCccCCCCC--cHHHHHHHHHhhhhcCC
Q 021898 47 CPVTVCGDIH--GQ---------FH------DLVELFRIGG-NAPDTNYLFMGDYVDRGYY--SVETVTLLVALKVRYRD 106 (306)
Q Consensus 47 ~~i~viGDIH--G~---------~~------~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~--s~evl~~l~~lk~~~p~ 106 (306)
-++..|+|-| |+ ++ -|.+.+...- ..+.+.++||||++|-|.. .-|--....+++..++.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 3688888876 31 11 1334444333 3457889999999998874 44556666667766665
Q ss_pred ----cEEEecCCccc
Q 021898 107 ----RITILRGNHES 117 (306)
Q Consensus 107 ----~v~~LrGNHE~ 117 (306)
.+..+.||||-
T Consensus 129 k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCeeEEeCCcccc
Confidence 78899999997
No 103
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.80 E-value=0.11 Score=47.29 Aligned_cols=64 Identities=22% Similarity=0.169 Sum_probs=37.5
Q ss_pred ceEEecCCCCHH----------------------HHHHHHHHcCCC-CCCeE-EEeCCccCCCCCc-----HHHHHHHHH
Q 021898 49 VTVCGDIHGQFH----------------------DLVELFRIGGNA-PDTNY-LFMGDYVDRGYYS-----VETVTLLVA 99 (306)
Q Consensus 49 i~viGDIHG~~~----------------------~L~~ll~~~~~~-~~~~~-vfLGD~vDrG~~s-----~evl~~l~~ 99 (306)
++.++|+||.+. .+..+++..... ..+.+ +..||+++..+.+ ..++..+..
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 567888888643 344555544333 44445 4589999876533 244555555
Q ss_pred hhhhcCCcEEEecCCcccc
Q 021898 100 LKVRYRDRITILRGNHESR 118 (306)
Q Consensus 100 lk~~~p~~v~~LrGNHE~~ 118 (306)
+ +-.+. . ||||..
T Consensus 83 ~----g~da~-~-GNHefd 95 (264)
T cd07411 83 L----GVDAM-V-GHWEFT 95 (264)
T ss_pred h----CCeEE-e-cccccc
Confidence 4 22333 3 999963
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=93.22 E-value=0.28 Score=46.26 Aligned_cols=74 Identities=20% Similarity=0.292 Sum_probs=47.6
Q ss_pred CcceEEecCCCCHHHHHHHH---HHcCCCCCCeEEEeCCccC-CCC---CcHHH---HHH------HHHhhhhcCCcEEE
Q 021898 47 CPVTVCGDIHGQFHDLVELF---RIGGNAPDTNYLFMGDYVD-RGY---YSVET---VTL------LVALKVRYRDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll---~~~~~~~~~~~vfLGD~vD-rG~---~s~ev---l~~------l~~lk~~~p~~v~~ 110 (306)
+||.|=|--||.++.+-+-+ ++.|..+.|.++++||+=. |.. .++.| +.- -.+-...+|=--++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47899999999999887544 4556668899999999942 211 11111 111 11223345545578
Q ss_pred ecCCcccchh
Q 021898 111 LRGNHESRQI 120 (306)
Q Consensus 111 LrGNHE~~~~ 120 (306)
+=||||.+..
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999998653
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.19 E-value=0.25 Score=45.32 Aligned_cols=66 Identities=18% Similarity=0.225 Sum_probs=38.4
Q ss_pred cceEEecCCCCH---------------------HHHHHHHHHcCCCCCCe-EEEeCCccCCCCC-----cHHHHHHHHHh
Q 021898 48 PVTVCGDIHGQF---------------------HDLVELFRIGGNAPDTN-YLFMGDYVDRGYY-----SVETVTLLVAL 100 (306)
Q Consensus 48 ~i~viGDIHG~~---------------------~~L~~ll~~~~~~~~~~-~vfLGD~vDrG~~-----s~evl~~l~~l 100 (306)
+++-++|+||++ ..+..+++.......+. ++-.||++...+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 367789999864 34555555443323333 4447999987653 23345555444
Q ss_pred hhhcCCcEEEecCCcccc
Q 021898 101 KVRYRDRITILRGNHESR 118 (306)
Q Consensus 101 k~~~p~~v~~LrGNHE~~ 118 (306)
.. .+.. .||||..
T Consensus 82 g~----D~~~-lGNHefd 94 (281)
T cd07409 82 GY----DAMT-LGNHEFD 94 (281)
T ss_pred CC----CEEE-ecccccc
Confidence 22 4444 5999973
No 106
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=92.58 E-value=5.9 Score=36.04 Aligned_cols=50 Identities=12% Similarity=0.202 Sum_probs=29.6
Q ss_pred eEEEeeccccccceEEec--CCeEEEEecCCCCcccCCCcEEEEEEc-CCCceeEEEe
Q 021898 232 TLISRAHQLVMDGYNWCQ--DKNVVTVFSAPNYCYRCGNMAAILEIG-ENMEQNFLQF 286 (306)
Q Consensus 232 ~~iIrGH~~~~~G~~~~~--~~~~itifSa~~y~~~~~n~~avl~i~-~~~~~~~~~~ 286 (306)
+..+.||++. -|..... +++-+.+.|.|.|.. .|.++.+| ++++++.+.|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 6788999987 3344332 256677888888853 34444443 2455555443
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=91.79 E-value=0.37 Score=43.61 Aligned_cols=64 Identities=23% Similarity=0.207 Sum_probs=40.4
Q ss_pred ceEEecCC----------CCHHHHHHHHHHcCCCCCC-eEEEeCCccCCCCC-----cHHHHHHHHHhhhhcCCcEEEec
Q 021898 49 VTVCGDIH----------GQFHDLVELFRIGGNAPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDRITILR 112 (306)
Q Consensus 49 i~viGDIH----------G~~~~L~~ll~~~~~~~~~-~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~v~~Lr 112 (306)
++-+.|+| |.+..+..+++.......+ -++..||+++.++. ...++..+..+. --+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEee
Confidence 45566666 4466677777665443334 56668999987652 245666666553 135568
Q ss_pred CCccc
Q 021898 113 GNHES 117 (306)
Q Consensus 113 GNHE~ 117 (306)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99996
No 108
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.72 E-value=0.26 Score=54.12 Aligned_cols=65 Identities=20% Similarity=0.277 Sum_probs=41.7
Q ss_pred cceEEecCCCCH---HHHHHHHHHcCCCCCCeEEE-eCCccCCCCCc-----HHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 48 PVTVCGDIHGQF---HDLVELFRIGGNAPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 48 ~i~viGDIHG~~---~~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++++..+. --.+..||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 589999999875 34455555443333445544 79999877643 24555555542 12558999997
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=91.64 E-value=0.5 Score=43.16 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=49.0
Q ss_pred CcceEEecCCCC--HHHHHHHHHHcCC-CCCCeEEEeCCccCCC-CCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 47 CPVTVCGDIHGQ--FHDLVELFRIGGN-APDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~--~~~L~~ll~~~~~-~~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
++|.++|||=|. ...+...|..+.. .+.|.+|.-||....| .-+.++...|..+-. +++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 478999999999 5567777765543 2356777789998766 457788888887732 56666 999974
No 110
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=91.52 E-value=0.57 Score=44.00 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=42.3
Q ss_pred cceEEecCCCCHH-----------------HHH--HHH-HHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHh---hhhc
Q 021898 48 PVTVCGDIHGQFH-----------------DLV--ELF-RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL---KVRY 104 (306)
Q Consensus 48 ~i~viGDIHG~~~-----------------~L~--~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l---k~~~ 104 (306)
+|+.+.|+|=... ++. ..+ +.+.....|.+||+||.|+. ......-..++.- .+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 6899999995444 111 111 22344568999999999985 4444433333221 1222
Q ss_pred CCcEEEecCCcccch
Q 021898 105 RDRITILRGNHESRQ 119 (306)
Q Consensus 105 p~~v~~LrGNHE~~~ 119 (306)
.=....+.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 224678999999853
No 111
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=89.46 E-value=0.53 Score=40.93 Aligned_cols=72 Identities=11% Similarity=0.168 Sum_probs=41.0
Q ss_pred ceEEecCCCC-----HHHHHHHHHHcC-CCCCCeEEEeCCccCCCCCcH----------HHHHHHHHhhhhc-----CCc
Q 021898 49 VTVCGDIHGQ-----FHDLVELFRIGG-NAPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKVRY-----RDR 107 (306)
Q Consensus 49 i~viGDIHG~-----~~~L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~lk~~~-----p~~ 107 (306)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+...+ --+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5678888865 556777887777 667789999999999632111 1111222222111 138
Q ss_pred EEEecCCcccchh
Q 021898 108 ITILRGNHESRQI 120 (306)
Q Consensus 108 v~~LrGNHE~~~~ 120 (306)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.19 E-value=0.94 Score=44.07 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=52.4
Q ss_pred CCcceEEecCCCCHHHHHHHHHHcCC--CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCc
Q 021898 46 KCPVTVCGDIHGQFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNH 115 (306)
+.+|.++||.-|+++.|.+-++.... -+-+.++++|++.+-...+.|++.+....+ ..|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 36899999999999998877765443 246889999999987667778887776553 3466777776665
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=88.73 E-value=0.59 Score=43.00 Aligned_cols=66 Identities=18% Similarity=0.044 Sum_probs=36.7
Q ss_pred cceEEecCCCCHHH----------HHHHHHHcCC-----CCCCeEEEeCCccCCCCC-----cHHHHHHHHHhhhhcCCc
Q 021898 48 PVTVCGDIHGQFHD----------LVELFRIGGN-----APDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDR 107 (306)
Q Consensus 48 ~i~viGDIHG~~~~----------L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~ 107 (306)
.|+.++|+||++.. +..+++.... .+...++-.||.+...+. ...++.++..+.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 36788999997533 4444443321 233344447999843332 2334555555532 3
Q ss_pred EEEecCCcccc
Q 021898 108 ITILRGNHESR 118 (306)
Q Consensus 108 v~~LrGNHE~~ 118 (306)
+.. .||||.-
T Consensus 78 a~~-~GNHEfD 87 (285)
T cd07405 78 AMA-VGNHEFD 87 (285)
T ss_pred EEe-ecccccc
Confidence 444 4999964
No 114
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=88.42 E-value=1.5 Score=39.79 Aligned_cols=66 Identities=18% Similarity=0.159 Sum_probs=45.7
Q ss_pred cceEEecCCCCHH--HHHHHHHHcCC-CCCCeEEEeCCccCCC-CCcHHHHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 48 PVTVCGDIHGQFH--DLVELFRIGGN-APDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIHG~~~--~L~~ll~~~~~-~~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
+|.+||||=|... .+...|..... .+.|.+|..||..--| .-+.++...|..+-. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 5889999999754 45566654433 2346666689998666 367788888888743 55555 999863
No 115
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=87.97 E-value=3.9 Score=39.97 Aligned_cols=209 Identities=13% Similarity=0.107 Sum_probs=97.8
Q ss_pred CCcceEEecCCCCHHH--HHHHHHHcCCCCCCeEEEeCCccCCCCCc----HHHHHHHHHhhhhcCCcEEEecCCcccch
Q 021898 46 KCPVTVCGDIHGQFHD--LVELFRIGGNAPDTNYLFMGDYVDRGYYS----VETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~--L~~ll~~~~~~~~~~~vfLGD~vDrG~~s----~evl~~l~~lk~~~p~~v~~LrGNHE~~~ 119 (306)
+.++.|+||+==.... .+...... .+.+-++++||+.---..+ -+-.+++..+...-| -.+.-||||...
T Consensus 147 ~~~~~i~GDlG~~~~~~s~~~~~~~~--~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~ 222 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYTSTLRNQEEN--LKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDW 222 (452)
T ss_pred ceeEEEEccccccccccchHhHHhcc--cCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccC
Confidence 4579999998433322 22322222 2478899999997322222 122333333332233 567899999977
Q ss_pred hhhhcCChHHHHHHhcCh--------hhhHHHHHHhhccCceEEE-eceEEEecCCCCCCCC----CHHHHHhhcccccC
Q 021898 120 ITQVYGFYDECLRKYGNA--------NVWKHFTDLFDYLPLTALI-ESQVFCLHGGLSPSLD----TLDNIRALDRIQEV 186 (306)
Q Consensus 120 ~~~~~~f~~e~~~~~~~~--------~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~----~~~~i~~i~r~~~~ 186 (306)
.+.. .| .....+|... .+|-. |+.=|+-.++ +...-. |..+..+ ..+++.+++|...
T Consensus 223 ~~~~-~F-~~y~~Rf~mP~~~s~s~~~l~YS----fd~G~vhfv~lsse~~~---~~~~~~~QY~WL~~dL~~v~r~~t- 292 (452)
T KOG1378|consen 223 PPQP-CF-VPYSARFNMPGNSSESDSNLYYS----FDVGGVHFVVLSTETYY---NFLKGTAQYQWLERDLASVDRKKT- 292 (452)
T ss_pred CCcc-cc-cccceeeccCCCcCCCCCceeEE----EeeccEEEEEEeccccc---cccccchHHHHHHHHHHHhcccCC-
Confidence 6533 11 1222333211 01111 1111211111 111111 3333222 1345666665420
Q ss_pred CCCCcccccccCCCCCCCCCccCCCCCccccCh-----hhHHhhhhhcCCeEEEeeccccccceEEecCCeEEEEecCCC
Q 021898 187 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQ-----DIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPN 261 (306)
Q Consensus 187 ~~~~~~~~llW~dp~~~~~~~~~~rg~g~~fg~-----~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~ 261 (306)
. ..=.++-+|. +..+... -+..|. ..++..+-++++++++-||.+.=++.....+.++..-.- +.
T Consensus 293 --P--WlIv~~HrP~----Y~S~~~~-~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-~~ 362 (452)
T KOG1378|consen 293 --P--WLIVQGHRPM----YCSSNDA-HYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-PV 362 (452)
T ss_pred --C--eEEEEecccc----eecCCch-hhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCC-cc
Confidence 0 1123344332 1111110 122232 368999999999999999998766655555655533222 33
Q ss_pred CcccCCCcEEEEEEcCCC
Q 021898 262 YCYRCGNMAAILEIGENM 279 (306)
Q Consensus 262 y~~~~~n~~avl~i~~~~ 279 (306)
++. ..+....+.+...+
T Consensus 363 ~~~-d~~aPvyI~~G~~G 379 (452)
T KOG1378|consen 363 HLV-DGMAPIYITVGDGG 379 (452)
T ss_pred ccc-CCCCCEEEEEccCC
Confidence 332 23344455554443
No 116
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=86.76 E-value=6.2 Score=34.03 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=63.2
Q ss_pred CeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChH----------------HHHHHhcChh
Q 021898 75 TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 138 (306)
Q Consensus 75 ~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~----------------e~~~~~~~~~ 138 (306)
..+|++|- |-+..|+++++..++..|-.+- .+.|+-|.|..+....|.. |..+.| -..
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~-yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRS-YIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceE-EEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 56888885 8889999999999998887554 4599999999887555431 223333 234
Q ss_pred hhHHHHHHhhccCceEEEeceEEEecC
Q 021898 139 VWKHFTDLFDYLPLTALIESQVFCLHG 165 (306)
Q Consensus 139 ~~~~~~~~~~~lP~~~~i~~~~l~vHg 165 (306)
++..+...+.++++...+.-+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 667788888888888777667888876
No 117
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=85.34 E-value=1.3 Score=40.77 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=38.1
Q ss_pred cceEEecCCCCHHH-------------HHHH---HHH-cCCC-CCCeEEEeCCccCCCCC-------cHHHHHHHHHhhh
Q 021898 48 PVTVCGDIHGQFHD-------------LVEL---FRI-GGNA-PDTNYLFMGDYVDRGYY-------SVETVTLLVALKV 102 (306)
Q Consensus 48 ~i~viGDIHG~~~~-------------L~~l---l~~-~~~~-~~~~~vfLGD~vDrG~~-------s~evl~~l~~lk~ 102 (306)
.|+-+.|+||++.. +.++ ++. .... +...++-.||.+..-+. ...+++++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 48889999997631 2232 221 1222 22344558999986542 233455555552
Q ss_pred hcCCcEEEecCCcccc
Q 021898 103 RYRDRITILRGNHESR 118 (306)
Q Consensus 103 ~~p~~v~~LrGNHE~~ 118 (306)
--.+..||||..
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 235788999984
No 118
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=85.24 E-value=1.2 Score=44.52 Aligned_cols=67 Identities=25% Similarity=0.289 Sum_probs=43.0
Q ss_pred CcceEEecCCCCHH------------HHHHH---HHHcCC-CCCCeEEEeCCccCCCC------CcHHHHHHHHHhhhhc
Q 021898 47 CPVTVCGDIHGQFH------------DLVEL---FRIGGN-APDTNYLFMGDYVDRGY------YSVETVTLLVALKVRY 104 (306)
Q Consensus 47 ~~i~viGDIHG~~~------------~L~~l---l~~~~~-~~~~~~vfLGD~vDrG~------~s~evl~~l~~lk~~~ 104 (306)
-+|+-+.|+||++. .+.++ ++.... .+...+|=.||+++..+ .....+.++-.++.
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y-- 104 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY-- 104 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC--
Confidence 46899999999988 33333 332222 22344555899999743 34456777777742
Q ss_pred CCcEEEecCCcccc
Q 021898 105 RDRITILRGNHESR 118 (306)
Q Consensus 105 p~~v~~LrGNHE~~ 118 (306)
=..-.||||.-
T Consensus 105 ---Da~tiGNHEFd 115 (517)
T COG0737 105 ---DAMTLGNHEFD 115 (517)
T ss_pred ---cEEeecccccc
Confidence 25678999984
No 119
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=84.49 E-value=1.7 Score=40.62 Aligned_cols=64 Identities=25% Similarity=0.224 Sum_probs=39.3
Q ss_pred ceEEecCCCCHH------HHHHHHHHcCC-----CCCCeEEEeCCccCCCCC-------------cHHHHHHHHHhhhhc
Q 021898 49 VTVCGDIHGQFH------DLVELFRIGGN-----APDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVRY 104 (306)
Q Consensus 49 i~viGDIHG~~~------~L~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~lk~~~ 104 (306)
|+-+.|+||++. .+..+++.... .+...++..||.+.-++. ...++.++-.+..
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~-- 80 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV-- 80 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC--
Confidence 667899999853 34344443221 233455558999875542 3455666666632
Q ss_pred CCcEEEecCCccc
Q 021898 105 RDRITILRGNHES 117 (306)
Q Consensus 105 p~~v~~LrGNHE~ 117 (306)
=.+..||||.
T Consensus 81 ---Da~tlGNHEF 90 (313)
T cd08162 81 ---QAIALGNHEF 90 (313)
T ss_pred ---cEEecccccc
Confidence 2567899996
No 120
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=83.26 E-value=2.4 Score=40.87 Aligned_cols=72 Identities=8% Similarity=-0.019 Sum_probs=43.9
Q ss_pred CcceEEecCCCCHHHHHH---HH-HHcCCCCCCeEEEeCCccCCCCCcHH------HHHHHHHhhh-hcCCcEEEecCCc
Q 021898 47 CPVTVCGDIHGQFHDLVE---LF-RIGGNAPDTNYLFMGDYVDRGYYSVE------TVTLLVALKV-RYRDRITILRGNH 115 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~---ll-~~~~~~~~~~~vfLGD~vDrG~~s~e------vl~~l~~lk~-~~p~~v~~LrGNH 115 (306)
-+++++||-=+....-.. .+ +.+...+.+.+|-+||-++.|..++. ..+-++.-.. .-.-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 469999996543332222 22 23334667889999999888876543 3444443221 0012589999999
Q ss_pred ccc
Q 021898 116 ESR 118 (306)
Q Consensus 116 E~~ 118 (306)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 121
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=82.39 E-value=2.1 Score=44.03 Aligned_cols=65 Identities=18% Similarity=0.174 Sum_probs=39.8
Q ss_pred cceEEecCCCCHHH----------------HHHHHHHcCC-CCCCeEEEeCCccCCCCCc-------------HHHHHHH
Q 021898 48 PVTVCGDIHGQFHD----------------LVELFRIGGN-APDTNYLFMGDYVDRGYYS-------------VETVTLL 97 (306)
Q Consensus 48 ~i~viGDIHG~~~~----------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s-------------~evl~~l 97 (306)
+|+-..|+||++.. +..+++.... .+...++-.||.+...+.+ .-++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 57889999998642 3344443322 2344555589999865432 2355555
Q ss_pred HHhhhhcCCcEEEecCCccc
Q 021898 98 VALKVRYRDRITILRGNHES 117 (306)
Q Consensus 98 ~~lk~~~p~~v~~LrGNHE~ 117 (306)
-.|.. =....||||.
T Consensus 84 N~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 84 NLLKY-----DVGNLGNHEF 98 (626)
T ss_pred hhcCc-----cEEecccccc
Confidence 55532 2577899996
No 122
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=82.01 E-value=0.083 Score=50.29 Aligned_cols=96 Identities=5% Similarity=-0.172 Sum_probs=68.2
Q ss_pred CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcccchhhhhcCChHHHHHHhc---ChhhhHHHHHHhh
Q 021898 72 APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG---NANVWKHFTDLFD 148 (306)
Q Consensus 72 ~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~---~~~~~~~~~~~~~ 148 (306)
+..-..|++++..+++...++.+.+-......+..+-...++||+.... +.++....-. ...+++..++-++
T Consensus 46 ~d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~-----~R~~LVlp~l~S~riyvid~~~ep~~ 120 (476)
T KOG0918|consen 46 PDYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSF-----KRRYLVLPSLNSGRIYVIDVKTEPRK 120 (476)
T ss_pred CcceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcch-----hhhheeecccccCceEEEEeccCcCc
Confidence 3455688899999999999999998888888877788889999955322 2222111111 1235566677778
Q ss_pred ccCceEEEeceEEEecCCCCCCCCC
Q 021898 149 YLPLTALIESQVFCLHGGLSPSLDT 173 (306)
Q Consensus 149 ~lP~~~~i~~~~l~vHgGi~p~~~~ 173 (306)
.++..++.+ ++++.||+..|....
T Consensus 121 ~~l~k~i~~-~il~~~~l~~Pht~h 144 (476)
T KOG0918|consen 121 PSLEKTIDP-DILEKTGLACPHTSH 144 (476)
T ss_pred cceeeeech-hhHhhcCCcCCcccc
Confidence 888887555 899999999987643
No 123
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=81.99 E-value=2.3 Score=43.93 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=42.0
Q ss_pred CCcceEEecCCCCHHH----------------HHHHHHHcCC-CCCCeEEEeCCccCCCCCcH-------------HHHH
Q 021898 46 KCPVTVCGDIHGQFHD----------------LVELFRIGGN-APDTNYLFMGDYVDRGYYSV-------------ETVT 95 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~----------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~-------------evl~ 95 (306)
.-+|+-..|+||++.. +..+++.... .+...+|-.||.+...|.+- .++.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~ 104 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYK 104 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHH
Confidence 4578999999998642 3344443322 23445566899998655321 2566
Q ss_pred HHHHhhhhcCCcEEEecCCccc
Q 021898 96 LLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 96 ~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
.+-.+.. -....||||.
T Consensus 105 amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 105 AMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHhcCC-----cEEeccchhh
Confidence 6666632 3577899996
No 124
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=81.68 E-value=2.1 Score=47.16 Aligned_cols=66 Identities=21% Similarity=0.276 Sum_probs=39.6
Q ss_pred CcceEEecCCCCHH----------------HHHHHHHHcCCCCCCeEEE-eCCccCCCCC--------------cHHHHH
Q 021898 47 CPVTVCGDIHGQFH----------------DLVELFRIGGNAPDTNYLF-MGDYVDRGYY--------------SVETVT 95 (306)
Q Consensus 47 ~~i~viGDIHG~~~----------------~L~~ll~~~~~~~~~~~vf-LGD~vDrG~~--------------s~evl~ 95 (306)
-+|+..+|+||++. .+..+++.........+++ .||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 35999999999853 2344454433222344444 8999986651 223555
Q ss_pred HHHHhhhhcCCcEEEecCCccc
Q 021898 96 LLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 96 ~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
.+-.+. --....||||.
T Consensus 122 ~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHhhcC-----ccEEeeccccc
Confidence 555552 22456899997
No 125
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=79.74 E-value=2.7 Score=42.36 Aligned_cols=67 Identities=18% Similarity=0.071 Sum_probs=37.9
Q ss_pred CcceEEecCCCCHH----------HHHHHHHHcC-----CCCCCeEEEeCCccCCCCC-----cHHHHHHHHHhhhhcCC
Q 021898 47 CPVTVCGDIHGQFH----------DLVELFRIGG-----NAPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYRD 106 (306)
Q Consensus 47 ~~i~viGDIHG~~~----------~L~~ll~~~~-----~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~ 106 (306)
-.|+-+.|+||++. .+..+++... ..+..-++..||++...+. ...+++++-.+..
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~---- 110 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY---- 110 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC----
Confidence 35899999999864 1233343221 1233445557999864332 2234555555532
Q ss_pred cEEEecCCcccc
Q 021898 107 RITILRGNHESR 118 (306)
Q Consensus 107 ~v~~LrGNHE~~ 118 (306)
.+.. .||||.-
T Consensus 111 Da~t-lGNHEFD 121 (551)
T PRK09558 111 DAMA-VGNHEFD 121 (551)
T ss_pred CEEc-ccccccC
Confidence 4444 4999974
No 126
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=78.34 E-value=7.2 Score=38.99 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=41.8
Q ss_pred CcceEEecCCCC------------HHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHh
Q 021898 47 CPVTVCGDIHGQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL 100 (306)
Q Consensus 47 ~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l 100 (306)
-||.|-.|+|=. +..|.++|..+.....|.++.-||++.--.-|..+|.-...+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 468999999953 567889999888888898999999998776676665544443
No 127
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.56 E-value=4.4 Score=42.85 Aligned_cols=66 Identities=20% Similarity=0.169 Sum_probs=40.3
Q ss_pred CcceEEecCCCCHHH----------------HHHHHHHcCC-CCCCeEEEeCCccCCCCCc--------------HHHHH
Q 021898 47 CPVTVCGDIHGQFHD----------------LVELFRIGGN-APDTNYLFMGDYVDRGYYS--------------VETVT 95 (306)
Q Consensus 47 ~~i~viGDIHG~~~~----------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~s--------------~evl~ 95 (306)
-+|+-..|+||++.. +..+++.... .+...++-.||.+..-|.. ..++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 468899999998542 2233433321 2344556689999754432 13566
Q ss_pred HHHHhhhhcCCcEEEecCCccc
Q 021898 96 LLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 96 ~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
++-.|.. -....||||.
T Consensus 196 amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 196 ALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHhccCC-----CEEEechhhc
Confidence 6666632 3577899996
No 128
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=75.92 E-value=3.5 Score=37.67 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=43.0
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCC-cEEEecCCcccchh
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQI 120 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~LrGNHE~~~~ 120 (306)
.+++.|+|-|+...+.. ..+..|.++.+||+-.-|. +.||..+=-.+- ..|. .-+.|+||||...-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~g-slph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLG-SLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhc-cCcceeeEEEeeccceeec
Confidence 57999999998655443 3466788899999977554 445544322221 1122 44789999998654
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=73.59 E-value=6.9 Score=39.56 Aligned_cols=65 Identities=20% Similarity=0.144 Sum_probs=37.7
Q ss_pred ceEEecCCCCHHH---------------------HHHHHHHcC-CCCCCeEEEeCCccCCCCCc-----HHHHHHHHHhh
Q 021898 49 VTVCGDIHGQFHD---------------------LVELFRIGG-NAPDTNYLFMGDYVDRGYYS-----VETVTLLVALK 101 (306)
Q Consensus 49 i~viGDIHG~~~~---------------------L~~ll~~~~-~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk 101 (306)
|+-+.|+||++.. +..+++... ..+...++..||.+...+.+ ..++.++-.+.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667788887533 334444332 22345566689998755422 23455555553
Q ss_pred hhcCCcEEEecCCcccc
Q 021898 102 VRYRDRITILRGNHESR 118 (306)
Q Consensus 102 ~~~p~~v~~LrGNHE~~ 118 (306)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 236788999963
No 130
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=72.14 E-value=4.7 Score=36.94 Aligned_cols=71 Identities=23% Similarity=0.278 Sum_probs=42.6
Q ss_pred CcceEEecC--CCCHHHHHHHHHH---cCCCCCCeEEEeCCcc-CCCCCcH------HHHHHHHHhhhhcCCcEEEecCC
Q 021898 47 CPVTVCGDI--HGQFHDLVELFRI---GGNAPDTNYLFMGDYV-DRGYYSV------ETVTLLVALKVRYRDRITILRGN 114 (306)
Q Consensus 47 ~~i~viGDI--HG~~~~L~~ll~~---~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~lk~~~p~~v~~LrGN 114 (306)
-+++||||- +|.+..-+-.++. .....-+.++-+||-+ |-|..+. +...-++.--.+ .+.-+.+.||
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL-QkpWy~vlGN 122 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL-QKPWYSVLGN 122 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc-ccchhhhccC
Confidence 469999994 7777665544432 2334568888899976 5565432 222222221111 1146899999
Q ss_pred cccc
Q 021898 115 HESR 118 (306)
Q Consensus 115 HE~~ 118 (306)
||.+
T Consensus 123 HDyr 126 (336)
T KOG2679|consen 123 HDYR 126 (336)
T ss_pred cccc
Confidence 9985
No 131
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=71.75 E-value=19 Score=33.35 Aligned_cols=72 Identities=15% Similarity=0.263 Sum_probs=46.5
Q ss_pred CcceEEecCCCC----HHHHHHHHHHcC-CCC----CCeEEEeCCccCCC----CCcH----HHHHHHHH-hhhhcC---
Q 021898 47 CPVTVCGDIHGQ----FHDLVELFRIGG-NAP----DTNYLFMGDYVDRG----YYSV----ETVTLLVA-LKVRYR--- 105 (306)
Q Consensus 47 ~~i~viGDIHG~----~~~L~~ll~~~~-~~~----~~~~vfLGD~vDrG----~~s~----evl~~l~~-lk~~~p--- 105 (306)
..++|+||+|=+ .++|.++|+... ..+ ...+|++|+++-+. ..+. +-.+-|.. +...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 459999999975 566777777552 212 56789999998663 2222 23333433 122344
Q ss_pred --CcEEEecCCcccc
Q 021898 106 --DRITILRGNHESR 118 (306)
Q Consensus 106 --~~v~~LrGNHE~~ 118 (306)
.++++++|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 3899999999974
No 132
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=67.54 E-value=6.7 Score=35.10 Aligned_cols=88 Identities=23% Similarity=0.281 Sum_probs=46.0
Q ss_pred CeEEEeCCccC-CCC---CcHHHHHHHHHhhhh-------cCCcEEEecCCcccchhhhhcCChHHHHHHhcChh-hhHH
Q 021898 75 TNYLFMGDYVD-RGY---YSVETVTLLVALKVR-------YRDRITILRGNHESRQITQVYGFYDECLRKYGNAN-VWKH 142 (306)
Q Consensus 75 ~~~vfLGD~vD-rG~---~s~evl~~l~~lk~~-------~p~~v~~LrGNHE~~~~~~~~~f~~e~~~~~~~~~-~~~~ 142 (306)
...+||||-.+ |-. ...=++.+|.++... -.++|++|.||||.-.. ..| .+++.... ....
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~n-gny------~arlanhkls~gD 158 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFN-GNY------MARLANHKLSAGD 158 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccC-chH------HHHHhhCCCCccc
Confidence 44677777642 211 112245555554431 23489999999997432 222 22221111 1112
Q ss_pred HHHHhhccCceEEEe-ceEEEecCCCCC
Q 021898 143 FTDLFDYLPLTALIE-SQVFCLHGGLSP 169 (306)
Q Consensus 143 ~~~~~~~lP~~~~i~-~~~l~vHgGi~p 169 (306)
--..++.+|++.... .+++-.|-||-.
T Consensus 159 TYnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 159 TYNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred hhhccccccccccCcchhhhhcccCcee
Confidence 234567788775432 368888888854
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.24 E-value=10 Score=39.97 Aligned_cols=67 Identities=21% Similarity=0.185 Sum_probs=39.8
Q ss_pred CCcceEEecCCCCHHH----------------HHHHHHHcCC-CCCCeEEEeCCccCCCCC-------------------
Q 021898 46 KCPVTVCGDIHGQFHD----------------LVELFRIGGN-APDTNYLFMGDYVDRGYY------------------- 89 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~----------------L~~ll~~~~~-~~~~~~vfLGD~vDrG~~------------------- 89 (306)
.-+|+-..|+||++.. +..+++.... .+...++-.||.+-..+.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3469999999998532 3334433321 234455568998854332
Q ss_pred cHHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 90 SVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 90 s~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
...++.++-.|.. =....||||.
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCC-----CEEecccccc
Confidence 1235566655532 2577899995
No 134
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=59.09 E-value=24 Score=26.06 Aligned_cols=72 Identities=14% Similarity=0.043 Sum_probs=46.7
Q ss_pred eeeCCcceEEecCCCCHHHHHHHHHHcCC--CCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCC
Q 021898 43 QPVKCPVTVCGDIHGQFHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGN 114 (306)
Q Consensus 43 ~~~~~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGN 114 (306)
+.....+.+|=|---|.+.+.++++.+.. +....++.+|+.-|.|....+....+-.+...+.+.+++...|
T Consensus 8 v~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 8 VREPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp EEEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred EeeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 33334577888866688888888876532 3566778899999988877776666666665555564444444
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=56.98 E-value=7.7 Score=39.45 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=33.6
Q ss_pred ChhhHHhhhhhcCCe----EEEeeccccc--cceE-EecCCeEEEEec
Q 021898 218 GQDIASQFNHTNGLT----LISRAHQLVM--DGYN-WCQDKNVVTVFS 258 (306)
Q Consensus 218 g~~~~~~fl~~~~~~----~iIrGH~~~~--~G~~-~~~~~~~itifS 258 (306)
.++..+..|+.+|++ .||.||+||. .|-. +.++||++.|..
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDG 554 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDG 554 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcC
Confidence 467788899999998 9999999997 5654 446899999955
No 136
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=48.50 E-value=64 Score=31.59 Aligned_cols=67 Identities=12% Similarity=0.074 Sum_probs=47.8
Q ss_pred CCcceEEecCCC-CHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhc-CCcEEEecC
Q 021898 46 KCPVTVCGDIHG-QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-RDRITILRG 113 (306)
Q Consensus 46 ~~~i~viGDIHG-~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~LrG 113 (306)
...+.||=|-|+ +.+.+.+.|+.+...+..+++.+||+...|+.+.+...-+-+..... .+.++ +-|
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 346889999666 57888888876654444678999999999999988776666544333 34444 446
No 137
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=45.37 E-value=1.2e+02 Score=25.42 Aligned_cols=52 Identities=23% Similarity=0.366 Sum_probs=39.1
Q ss_pred eEEecCCCCHHHHHHHHH-HcCC------------CCCCeEEEeCCccCCCCCcHHHHHHHHHhh
Q 021898 50 TVCGDIHGQFHDLVELFR-IGGN------------APDTNYLFMGDYVDRGYYSVETVTLLVALK 101 (306)
Q Consensus 50 ~viGDIHG~~~~L~~ll~-~~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk 101 (306)
++.+-.+||-..+.+.+. .++. .....+||+|=-+|+|.-+-++..+|..|+
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 566667888777665553 2222 235679999999999999999999999875
No 138
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.06 E-value=72 Score=25.65 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeCCccCCC-----CCcHHHHHHHHHhhhhcCCcEEEe---cCCcccc
Q 021898 59 FHDLVELFRIGGNAPDTNYLFMGDYVDRG-----YYSVETVTLLVALKVRYRDRITIL---RGNHESR 118 (306)
Q Consensus 59 ~~~L~~ll~~~~~~~~~~~vfLGD~vDrG-----~~s~evl~~l~~lk~~~p~~v~~L---rGNHE~~ 118 (306)
+++|++.++..+....-.++|+|+-.|++ |+.+.....+..-...+|.+++++ -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888899888776677888999998875 455555555555444678877665 6887764
No 139
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=40.85 E-value=65 Score=32.71 Aligned_cols=61 Identities=20% Similarity=0.194 Sum_probs=37.9
Q ss_pred HHHHHHHcCC--CCCCeEEEeCCcc--CCCCCcHHH----HHHHHH-hhhhcCC-cEEEecCCcccchhhh
Q 021898 62 LVELFRIGGN--APDTNYLFMGDYV--DRGYYSVET----VTLLVA-LKVRYRD-RITILRGNHESRQITQ 122 (306)
Q Consensus 62 L~~ll~~~~~--~~~~~~vfLGD~v--DrG~~s~ev----l~~l~~-lk~~~p~-~v~~LrGNHE~~~~~~ 122 (306)
+..+|+.++. +..|.++..||.+ |+++.+.+. +.-+.+ +...+|+ .|+...||||..-.+.
T Consensus 197 ies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 197 IESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 4455554433 2368888899998 556655442 222222 2334665 7889999999977654
No 140
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=36.29 E-value=26 Score=31.98 Aligned_cols=39 Identities=28% Similarity=0.483 Sum_probs=25.6
Q ss_pred eEEEeCCccCCCCCcHH-HHHHHHHhhhhcCCcEEEecCCcccc
Q 021898 76 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 76 ~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~p~~v~~LrGNHE~~ 118 (306)
+++|+||+|++ ...+ +-..|-+++.+++..+++. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999965 2233 3456777787777555444 66664
No 141
>PLN02965 Probable pheophorbidase
Probab=35.62 E-value=1.3e+02 Score=26.24 Aligned_cols=21 Identities=10% Similarity=-0.059 Sum_probs=16.7
Q ss_pred hhHHhhhhhcCC--eEEEeeccc
Q 021898 220 DIASQFNHTNGL--TLISRAHQL 240 (306)
Q Consensus 220 ~~~~~fl~~~~~--~~iIrGH~~ 240 (306)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 447788888764 799999996
No 142
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=35.62 E-value=59 Score=28.76 Aligned_cols=29 Identities=14% Similarity=0.289 Sum_probs=23.3
Q ss_pred cCCeEEEeeccccccceEEecCCeEEEEecC
Q 021898 229 NGLTLISRAHQLVMDGYNWCQDKNVVTVFSA 259 (306)
Q Consensus 229 ~~~~~iIrGH~~~~~G~~~~~~~~~itifSa 259 (306)
.|+++||-||+++..+++.. ++++| +||-
T Consensus 204 ~G~DvIiG~H~H~~~~~e~~-~~~~I-~Ysl 232 (239)
T smart00854 204 AGADVVIGHHPHVLQPIEIY-KGKLI-AYSL 232 (239)
T ss_pred cCCCEEEcCCCCcCCceEEE-CCEEE-EEcc
Confidence 69999999999999999865 56665 4554
No 143
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=34.89 E-value=1.7e+02 Score=28.13 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCC-CHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHH
Q 021898 20 LPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHG-QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLV 98 (306)
Q Consensus 20 ~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG-~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~ 98 (306)
++.+++.+-+.....+-.+.. +.. ...+.+|=|-++ +.+.+.+.|+.+...+...++.+|++..-|..+.+.-..+-
T Consensus 271 i~~~~i~~~l~~~~~~~gR~e-~~~-~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~ 348 (417)
T TIGR01143 271 IPLEEIAEGLAELKLVKGRFE-IQT-KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVG 348 (417)
T ss_pred CCHHHHHHHHHhCCCCCCcee-EEc-CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHH
Confidence 566665554444332222222 222 356888989654 88889998887654334678889999877887776555554
Q ss_pred HhhhhcCCcEEEecCCc
Q 021898 99 ALKVRYRDRITILRGNH 115 (306)
Q Consensus 99 ~lk~~~p~~v~~LrGNH 115 (306)
.......-..+++-|..
T Consensus 349 ~~~~~~~~d~vi~~g~~ 365 (417)
T TIGR01143 349 RYANSLGIDLVFLVGEE 365 (417)
T ss_pred HHHHHcCCCEEEEECHH
Confidence 44333331334444543
No 144
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=32.07 E-value=46 Score=30.15 Aligned_cols=39 Identities=31% Similarity=0.377 Sum_probs=26.7
Q ss_pred eEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 76 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
+++|+||+|++.- -.-+-..|-+++.+++..+++. |-|.
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 4799999998743 2345667778888877565555 5555
No 145
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=30.56 E-value=1e+02 Score=21.97 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=36.7
Q ss_pred CChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCeee
Q 021898 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQP 44 (306)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e~~~~~ 44 (306)
|.++++++.|..+-.....|++++..++++...-|..+-.|..
T Consensus 1 M~~~~~~e~i~~iA~~t~~P~e~V~~my~dt~~~l~~~ARV~D 43 (66)
T PF12085_consen 1 MAQDNVDEVIRSIAEETGTPAETVRRMYDDTMRELSSGARVHD 43 (66)
T ss_pred CCcccHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcCCchhh
Confidence 4677888999999888889999999999999999888876643
No 146
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.37 E-value=16 Score=30.49 Aligned_cols=45 Identities=22% Similarity=0.463 Sum_probs=28.5
Q ss_pred ChhhHHhhhhhcCCeE---------EEeeccccccceEEecCCeEEEEecCCCCcccCCC
Q 021898 218 GQDIASQFNHTNGLTL---------ISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGN 268 (306)
Q Consensus 218 g~~~~~~fl~~~~~~~---------iIrGH~~~~~G~~~~~~~~~itifSa~~y~~~~~n 268 (306)
+++..+.||.+-|-+. =|||+=.+++.+.+.. =+.+|.||.++|.
T Consensus 23 ~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~------~~~~PsYC~~CGk 76 (158)
T PF10083_consen 23 NPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGG------HYEAPSYCHNCGK 76 (158)
T ss_pred CchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCC------CCCCChhHHhCCC
Confidence 4455667777776544 4888877744443322 2569999987764
No 147
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=28.33 E-value=25 Score=34.59 Aligned_cols=56 Identities=20% Similarity=0.232 Sum_probs=36.8
Q ss_pred hhhHHhhhhhcCCe----EEEeecccccc--ceE-EecCCeEEEEecC--CCCcccCCCcEEEEE
Q 021898 219 QDIASQFNHTNGLT----LISRAHQLVMD--GYN-WCQDKNVVTVFSA--PNYCYRCGNMAAILE 274 (306)
Q Consensus 219 ~~~~~~fl~~~~~~----~iIrGH~~~~~--G~~-~~~~~~~itifSa--~~y~~~~~n~~avl~ 274 (306)
++..+..|+.+|++ .||.||+|+.. |-. +-++|+++-|..+ ..|....+=+|-.|.
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTll 579 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLL 579 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEee
Confidence 46677888988877 89999999975 322 4468999888442 235444443443333
No 148
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=28.19 E-value=75 Score=27.99 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=23.4
Q ss_pred hcCCeEEEeeccccccceEEecCCeEEEEecC
Q 021898 228 TNGLTLISRAHQLVMDGYNWCQDKNVVTVFSA 259 (306)
Q Consensus 228 ~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa 259 (306)
..|+++||-||+++..+++. .++++| +||-
T Consensus 205 ~~G~D~IiG~H~Hv~q~~E~-~~~~~I-~YSl 234 (239)
T cd07381 205 DAGADLVIGHHPHVLQGIEI-YKGKLI-FYSL 234 (239)
T ss_pred HCCCCEEEcCCCCcCCCeEE-ECCEEE-EEcC
Confidence 45999999999999999987 455554 4664
No 149
>PRK02135 hypothetical protein; Provisional
Probab=27.51 E-value=2.5e+02 Score=24.63 Aligned_cols=19 Identities=32% Similarity=0.349 Sum_probs=7.6
Q ss_pred ceEEecCCCCHHHHHHHHH
Q 021898 49 VTVCGDIHGQFHDLVELFR 67 (306)
Q Consensus 49 i~viGDIHG~~~~L~~ll~ 67 (306)
++|.||=+|=-.+-.++|+
T Consensus 149 ~FvLgDH~~~~~ee~~~L~ 167 (201)
T PRK02135 149 VFVLGDHIGFTEEEENLLK 167 (201)
T ss_pred EEEEeCCCCCCHHHHHHHH
Confidence 3444444443333333333
No 150
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=27.43 E-value=2.6e+02 Score=27.57 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=45.7
Q ss_pred CcceEEec-CCCCHHHHHHHHHHcCCC----CCCeEEEeCCccCCCCCcHHHHHHHHHhhh-hcCCcEEEecC
Q 021898 47 CPVTVCGD-IHGQFHDLVELFRIGGNA----PDTNYLFMGDYVDRGYYSVETVTLLVALKV-RYRDRITILRG 113 (306)
Q Consensus 47 ~~i~viGD-IHG~~~~L~~ll~~~~~~----~~~~~vfLGD~vDrG~~s~evl~~l~~lk~-~~p~~v~~LrG 113 (306)
..+++|=| ---+.+.+.+.|+.+... +...++.+||+..+|+.+.+...-+-.... ...+.|+++ |
T Consensus 337 ~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i~V~G~m~elg~~~~~~h~~~~~~~~~~~~d~v~~~-G 408 (479)
T PRK14093 337 GEATLIDESYNANPASMAAALGVLGRAPVGPQGRRIAVLGDMLELGPRGPELHRGLAEAIRANAIDLVFCC-G 408 (479)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEEEEECChHHcCcHHHHHHHHHHHHHHHcCCCEEEEE-c
Confidence 45889988 344788899888866542 346788899999999998877655555433 234455554 6
No 151
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=26.70 E-value=1.2e+02 Score=28.31 Aligned_cols=60 Identities=12% Similarity=0.060 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHHHHhhCCCeeee--CCcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCcc
Q 021898 21 PEQEVNILCEQARAILVEEWNVQPV--KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (306)
Q Consensus 21 ~~~~~~~l~~~~~~il~~e~~~~~~--~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~v 84 (306)
+.+++.+-+.+.++.. +-..|-+. .+.|..++|+=|+=..|.++-+.. +.+.+||+||..
T Consensus 2 ~~~~~~~~I~~lk~e~-~~~ivah~y~~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 2 SRDNLVEAILRLKKEL-NAVILAHYYQKDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred ChHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 3444444444444443 22223333 355888999999877777776654 578899999963
No 152
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.80 E-value=1.5e+02 Score=27.97 Aligned_cols=61 Identities=26% Similarity=0.321 Sum_probs=39.8
Q ss_pred HHHhhCCCeeeeCCcceEEecCC-CCHHHHHHHHHHcCCCCCCeEEE-eCCcc--CCCCCcHHHHHHHHHhhh
Q 021898 34 AILVEEWNVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNYLF-MGDYV--DRGYYSVETVTLLVALKV 102 (306)
Q Consensus 34 ~il~~e~~~~~~~~~i~viGDIH-G~~~~L~~ll~~~~~~~~~~~vf-LGD~v--DrG~~s~evl~~l~~lk~ 102 (306)
+-++.-|-.++-.+.++++||.| |||.++... +..++| .-|+= --|+...+++.+..+|..
T Consensus 44 ~~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 44 QDMKTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHHhcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 34456665666678899999999 676666531 223344 66662 236777888888888754
No 153
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=24.58 E-value=2.2e+02 Score=18.92 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=25.9
Q ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhC
Q 021898 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEE 39 (306)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~e 39 (306)
..++.+++.+-++. ++-++...+.+++.++++..
T Consensus 6 ~~Le~Iv~~Le~~~-~sLdes~~lyeeg~~l~~~c 39 (53)
T PF02609_consen 6 ERLEEIVEKLESGE-LSLDESLKLYEEGMELIKKC 39 (53)
T ss_dssp HHHHHHHHHHHTT--S-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHH
Confidence 45778888887765 89999999999998887653
No 154
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=24.14 E-value=1.9e+02 Score=25.52 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=42.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCC------CCHHHHHHHHHHcCCCCCCeEEEeCCccCC
Q 021898 16 QCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH------GQFHDLVELFRIGGNAPDTNYLFMGDYVDR 86 (306)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIH------G~~~~L~~ll~~~~~~~~~~~vfLGD~vDr 86 (306)
++..++..+..+.++++.+++++.. ...+++.||+- ..+..+.++++... ...++.-|+- |.
T Consensus 34 ~Gi~~P~~~~~~~l~rl~~li~~~~-----~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~---~~v~~V~GNH-D~ 101 (225)
T TIGR00024 34 QGVMVPGFQFREIIERALSIADKYG-----IEALIINGDLKHEFKKGLEWRFIREFIEVTF---RDLILIRGNH-DA 101 (225)
T ss_pred cCCcCChhHHHHHHHHHHHHHhhcC-----CCEEEEcCccccccCChHHHHHHHHHHHhcC---CcEEEECCCC-CC
Confidence 4566888888889999988877653 24588999986 23455666666543 3566667876 43
No 155
>PF04839 PSRP-3_Ycf65: Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65); InterPro: IPR006924 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This small acidic protein is found in 30S ribosomal subunit of cyanobacteria and plant plastids. In plants it has been named plastid-specific ribosomal protein 3 (PSRP-3), and in cyanobacteria it is named Ycf65. Plastid-specific ribosomal proteins may mediate the effects of nuclear factors on plastid translation. The acidic PSRPs are thought to contribute to protein-protein interactions in the 30S subunit, and are not thought to bind RNA [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome, 0009536 plastid; PDB: 2KT9_A.
Probab=24.14 E-value=2.3e+02 Score=18.94 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=27.4
Q ss_pred ChhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 021898 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILV 37 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~ 37 (306)
-..-.+.+...+-+..=+++.+-+.|+.++.+++.
T Consensus 9 r~DAWe~lk~eLe~K~WIs~~e~i~lLN~~TeiIN 43 (49)
T PF04839_consen 9 REDAWEQLKNELESKPWISEKERIELLNQATEIIN 43 (49)
T ss_dssp TS-HHHHHHHHHHHSTTS-HHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 33446777778888888999999999999999875
No 156
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=24.01 E-value=4.2e+02 Score=22.02 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=40.7
Q ss_pred CcceEEecCCCCHHHHHHHHHHcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcc
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE 116 (306)
-++.|++. |....+..+++..|....-..++.+|-+..+.-..+++..+++.....|+++.+ -|.+.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~-vgD~~ 175 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF-VASNP 175 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE-EeCCH
Confidence 46888887 566677788887776443344566665666555566666655543344656544 45443
No 157
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=23.60 E-value=3.5e+02 Score=26.75 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecC-CCCHHHHHHHHHHcCCCCCCe-EEEeCCccCCCCCcHHHHHHH
Q 021898 20 LPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDI-HGQFHDLVELFRIGGNAPDTN-YLFMGDYVDRGYYSVETVTLL 97 (306)
Q Consensus 20 ~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDI-HG~~~~L~~ll~~~~~~~~~~-~vfLGD~vDrG~~s~evl~~l 97 (306)
++.+++..-+.....+=.+.. .......+.+|-|- .++.+.+...++.....+... ++.|||+..-|..+.++-.-+
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v 378 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEV 378 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHH
Confidence 555665555444433321222 23344556666664 568888998888776655444 899999999999898887777
Q ss_pred HHhhhhcCCcEEEecCC
Q 021898 98 VALKVRYRDRITILRGN 114 (306)
Q Consensus 98 ~~lk~~~p~~v~~LrGN 114 (306)
-+......-...++-|.
T Consensus 379 ~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 379 GEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHhcCceEEEEEcc
Confidence 66554432256777787
No 158
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=23.41 E-value=2.9e+02 Score=29.82 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=47.5
Q ss_pred eeeeCCcceEEecCCC-CHHHHHHHHHHcCCCC-CCeEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEecCCcc
Q 021898 42 VQPVKCPVTVCGDIHG-QFHDLVELFRIGGNAP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 42 ~~~~~~~i~viGDIHG-~~~~L~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~LrGNHE 116 (306)
++.....+.+|=|-++ +.+.+.+.|+...... ..+++.+|++-+.|..+.+.-..+-..........+++-|..-
T Consensus 829 ~~~~~~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~ 905 (958)
T PRK11929 829 RRRLSCGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAA 905 (958)
T ss_pred EEEcCCCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCH
Confidence 3333456888999764 7888888888665432 4678889999988888776544443332222224455557543
No 159
>COG3365 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.18 E-value=1.3e+02 Score=23.66 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=32.5
Q ss_pred CCChhhHHHHHHHHhcCC------CCCHHHHHHHHHHHHHHHhhC
Q 021898 1 MPSQADLDRQIEHLMQCK------PLPEQEVNILCEQARAILVEE 39 (306)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~il~~e 39 (306)
|+|++.+.-+|+.+..+. .+++++..+|++...+-..-|
T Consensus 17 msSmEkvr~Iid~vr~G~IlVLE~gL~P~eeaklIe~TM~eId~e 61 (118)
T COG3365 17 MSSMEKVRYIIDKVREGDILVLEGGLTPEEEAKLIEMTMSEIDPE 61 (118)
T ss_pred cchHHHHHHHHHhccCCcEEEEeCCCChHHHHHHHHHHHHhcCcc
Confidence 789999999999998774 599999999999987755444
No 160
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=23.10 E-value=1.2e+02 Score=27.54 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=30.5
Q ss_pred cceEEecCCCCH--HHHHHHHHHcCC-CCCCeEEEeCCccCCCCC-cHHHHHHHHHhhhhcCCcEEEecCCccc
Q 021898 48 PVTVCGDIHGQF--HDLVELFRIGGN-APDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 48 ~i~viGDIHG~~--~~L~~ll~~~~~-~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~LrGNHE~ 117 (306)
|+.++||+-|.. ..+..-|..+.. ...+.+|.-|.-...|.. +.+....+++. . -=++-.|||-+
T Consensus 2 riLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~----G-~dviT~GNH~w 70 (266)
T COG1692 2 RILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA----G-ADVITLGNHTW 70 (266)
T ss_pred eEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh----C-CCEEecccccc
Confidence 566777777642 223333322221 223555555665544432 34455555444 1 12445677754
No 161
>PF02671 PAH: Paired amphipathic helix repeat; InterPro: IPR003822 This family contains the paired amphipathic helix (PAH) repeat. The family contains the eukaryotic Sin3 proteins, which have at least three PAH domains (PAH1, PAH2, and PAH3). Sin3 proteins are components of a co-repressor complex that silences transcription, playing important roles in the transition between proliferation and differentiation. Sin3 proteins are recruited to the DNA by various DNA-binding transcription factors such as the Mad family of repressors, Mnt/Rox, PLZF, MeCP2, p53, REST/NRSF, MNFbeta, Sp1, TGIF and Ume6 []. Sin3 acts as a scaffold protein that in turn recruits histone-binding proteins RbAp46/RbAp48 and histone deacetylases HDAC1/HDAC2, which deacetylate the core histones resulting in a repressed state of the chromatin []. The PAH domains are protein-protein interaction domains through which Sin3 fulfils its role as a scaffold. The PAH2 domain of Sin3 can interact with a wide range of unrelated and structurally diverse transcription factors that bind using different interaction motifs. For example, the Sin3 PAH2 domain can interact with the unrelated Mad and HBP1 factors using alternative interaction motifs that involve binding in opposite helical orientations [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1S5Q_B 2L9S_B 1G1E_B 1S5R_B 2CR7_A 2CZY_A 2LD7_B 2RMR_A 2RMS_A 1PD7_A ....
Probab=21.85 E-value=90 Score=20.03 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=23.0
Q ss_pred hhHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHhhCCCee
Q 021898 5 ADLDRQIEHLM--QCKPLPEQEVNILCEQARAILVEEWNVQ 43 (306)
Q Consensus 5 ~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~il~~e~~~~ 43 (306)
+..+++++.+. +...++.++ +++++.++|...|.++
T Consensus 2 ~~Y~~FL~il~~y~~~~~~~~~---v~~~v~~Ll~~hpdLl 39 (47)
T PF02671_consen 2 EVYNEFLKILNDYKKGRISRSE---VIEEVSELLRGHPDLL 39 (47)
T ss_dssp HHHHHHHHHHHHHHCTCSCHHH---HHHHHHHHTTT-HHHH
T ss_pred hHHHHHHHHHHHHHhcCCCHHH---HHHHHHHHHccCHHHH
Confidence 34566666654 345677666 6777888888877654
No 162
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=21.53 E-value=5.2e+02 Score=22.16 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=54.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCCCHHHHHHHHHHcCCC-------------------------
Q 021898 18 KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNA------------------------- 72 (306)
Q Consensus 18 ~~~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~------------------------- 72 (306)
-.++++++.+-+.+..+.+.++-.= ...++||=++|++.-+-.+++....+
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~k 85 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILK 85 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEec
Confidence 3588999998888887777766432 56788999999988777777654321
Q ss_pred ------CCCeEEEeCCccCCCCCcHHHHHHHH
Q 021898 73 ------PDTNYLFMGDYVDRGYYSVETVTLLV 98 (306)
Q Consensus 73 ------~~~~~vfLGD~vDrG~~s~evl~~l~ 98 (306)
....++.+=|++|-|-.=..+.+++.
T Consensus 86 Dld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 86 DLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 24568889999998864444444443
No 163
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=20.85 E-value=1.4e+02 Score=26.61 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=26.2
Q ss_pred hhhcCCeEEEeeccccccceEEecCCeEEEEecCCCC
Q 021898 226 NHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 226 l~~~~~~~iIrGH~~~~~G~~~~~~~~~itifSa~~y 262 (306)
+-..|+++||-+|.++..|++.. ++++| +||-=|+
T Consensus 212 lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNf 246 (250)
T PF09587_consen 212 LIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNF 246 (250)
T ss_pred HHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCccc
Confidence 33369999999999999999976 66655 4665333
No 164
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=20.79 E-value=1.1e+02 Score=24.43 Aligned_cols=55 Identities=18% Similarity=0.311 Sum_probs=34.1
Q ss_pred CcceEEecCCCCHHHHHHHHHHcC----------------------CCCCCeEEEeCCccCCCCCcHHHHHHHHHhh
Q 021898 47 CPVTVCGDIHGQFHDLVELFRIGG----------------------NAPDTNYLFMGDYVDRGYYSVETVTLLVALK 101 (306)
Q Consensus 47 ~~i~viGDIHG~~~~L~~ll~~~~----------------------~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk 101 (306)
.|-++|||..+--....+.++..+ ..+...++++|-.-+|-.+.+..+.++...+
T Consensus 36 ~Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~p~kD~TD~e~Al~~~~~~~~~~i~v~Ga~GgR~DH~lanl~~l~~~~ 112 (123)
T PF04263_consen 36 KPDLIIGDFDSISPEVLEFYKSKGVEIIHFPEKDYTDLEKALEYAIEQGPDEIIVLGALGGRFDHTLANLNLLYKYK 112 (123)
T ss_dssp --SEEEC-SSSS-HHHHHHHHHCTTEEEEE-STTS-HHHHHHHHHHHTTTSEEEEES-SSSSHHHHHHHHHHHHHHH
T ss_pred CCCEEEecCCCCChHHHHHHHhhccceecccccccCHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHHHHHHHHH
Confidence 357788888887666666554432 2345677778877777777777777777665
No 165
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=20.26 E-value=7.3e+02 Score=24.20 Aligned_cols=86 Identities=19% Similarity=0.217 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeeCCcceEEecCCC-------CHHHHHHHH---HHcCCCCCC--------------
Q 021898 20 LPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHG-------QFHDLVELF---RIGGNAPDT-------------- 75 (306)
Q Consensus 20 ~~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG-------~~~~L~~ll---~~~~~~~~~-------------- 75 (306)
.....+.+.+....+++..-..+++-.+....+||=-| +-++|.-+. +.+|+.+..
T Consensus 169 ~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasefy 248 (423)
T COG0148 169 VGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEFY 248 (423)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhhc
Confidence 55678888888888888888888877777777888666 333344333 456654321
Q ss_pred ---eEEEeCCccCCCCCcHHHHHHHHHhhhhcCCcEEEe
Q 021898 76 ---NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 76 ---~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~L 111 (306)
+|++=|. ...+.|.++++..|..+|| ++.+
T Consensus 249 ~~~~Y~~~~~----~~~~~e~i~~~~~Lv~~Yp--ivsi 281 (423)
T COG0148 249 KDGKYVLEGE----SLTSEELIEYYLELVKKYP--IVSI 281 (423)
T ss_pred cCCeeeecCc----ccCHHHHHHHHHHHHHhCC--EEEE
Confidence 2333333 3456788999999988888 5544
Done!