Query 021899
Match_columns 306
No_of_seqs 221 out of 1651
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 11:00:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h9e_O Glyceraldehyde-3-phosph 100.0 7E-114 2E-118 818.3 32.6 303 2-306 37-340 (346)
2 3pym_A GAPDH 3, glyceraldehyde 100.0 7E-114 2E-118 814.4 32.2 298 4-303 34-331 (332)
3 3v1y_O PP38, glyceraldehyde-3- 100.0 1E-113 5E-118 813.5 30.6 301 4-305 36-337 (337)
4 4dib_A GAPDH, glyceraldehyde 3 100.0 2E-112 7E-117 806.3 28.8 297 6-305 38-336 (345)
5 3doc_A Glyceraldehyde 3-phosph 100.0 5E-112 2E-116 802.2 30.3 295 6-303 38-333 (335)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 1E-112 5E-117 811.2 26.1 300 4-305 39-354 (359)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 3E-110 1E-114 790.1 30.1 296 5-306 37-338 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 7E-110 2E-114 791.9 24.7 295 6-303 54-356 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 2E-107 5E-112 774.7 31.3 296 5-304 37-334 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 9E-108 3E-112 777.8 28.8 298 4-303 44-344 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 1E-106 5E-111 769.4 26.5 296 5-304 35-340 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 6E-101 2E-105 730.8 30.7 296 5-304 32-329 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 9.4E-99 3E-103 725.5 30.4 296 6-304 38-336 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 4.7E-98 2E-102 712.1 30.2 298 5-305 36-335 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 3.3E-97 1E-101 707.5 32.4 297 6-305 38-337 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 3.8E-97 1E-101 705.8 30.3 297 5-304 34-332 (334)
17 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.2E-96 4E-101 701.8 31.0 296 5-303 35-331 (332)
18 3cps_A Glyceraldehyde 3-phosph 100.0 1.5E-96 5E-101 705.5 29.1 299 4-304 50-352 (354)
19 1gad_O D-glyceraldehyde-3-phos 100.0 1.8E-95 6E-100 693.5 29.1 295 5-302 34-329 (330)
20 3e5r_O PP38, glyceraldehyde-3- 100.0 7.7E-95 2.6E-99 691.0 31.2 300 4-304 36-336 (337)
21 1u8f_O GAPDH, glyceraldehyde-3 100.0 2.4E-94 8.1E-99 687.4 30.6 299 5-305 37-335 (335)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 9E-95 3.1E-99 690.9 27.4 296 6-304 39-336 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 7.1E-51 2.4E-55 388.8 11.4 206 7-239 36-254 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 4.5E-44 1.6E-48 340.3 19.8 256 33-303 39-329 (331)
25 2r00_A Aspartate-semialdehyde 100.0 1.8E-41 6.1E-46 323.0 23.1 260 33-303 42-333 (336)
26 2hjs_A USG-1 protein homolog; 100.0 1.4E-41 4.8E-46 324.2 18.9 262 33-303 45-335 (340)
27 1cf2_P Protein (glyceraldehyde 100.0 4.3E-41 1.5E-45 320.5 5.3 203 7-239 35-247 (337)
28 1t4b_A Aspartate-semialdehyde 100.0 1.7E-40 5.8E-45 319.7 8.3 193 39-236 47-299 (367)
29 2czc_A Glyceraldehyde-3-phosph 100.0 1.2E-36 4E-41 289.3 9.4 202 7-240 36-246 (334)
30 1b7g_O Protein (glyceraldehyde 100.0 5.2E-36 1.8E-40 285.8 11.2 165 61-239 77-247 (340)
31 3uw3_A Aspartate-semialdehyde 100.0 1.7E-36 5.7E-41 292.5 4.7 257 32-302 42-375 (377)
32 3pzr_A Aspartate-semialdehyde 100.0 2E-36 6.7E-41 291.4 4.2 257 33-304 39-369 (370)
33 3pwk_A Aspartate-semialdehyde 100.0 2.9E-35 1E-39 282.9 10.9 257 32-303 40-343 (366)
34 3tz6_A Aspartate-semialdehyde 100.0 3.7E-34 1.3E-38 273.2 17.2 253 32-302 39-341 (344)
35 2ep5_A 350AA long hypothetical 100.0 2.5E-35 8.6E-40 281.9 8.9 183 40-237 61-270 (350)
36 1xyg_A Putative N-acetyl-gamma 100.0 7.3E-35 2.5E-39 279.7 11.8 253 15-304 55-346 (359)
37 4dpk_A Malonyl-COA/succinyl-CO 100.0 1.9E-32 6.6E-37 262.9 19.3 231 60-303 78-353 (359)
38 4dpl_A Malonyl-COA/succinyl-CO 100.0 1.9E-32 6.6E-37 262.9 17.8 231 60-303 78-353 (359)
39 2ozp_A N-acetyl-gamma-glutamyl 100.0 1.6E-32 5.5E-37 262.1 13.5 224 57-303 66-331 (345)
40 1ys4_A Aspartate-semialdehyde 100.0 2.7E-32 9.3E-37 261.1 14.0 175 51-237 75-276 (354)
41 3hsk_A Aspartate-semialdehyde 100.0 7.1E-31 2.4E-35 253.6 14.9 170 60-238 92-301 (381)
42 3dr3_A N-acetyl-gamma-glutamyl 100.0 3.1E-30 1.1E-34 245.6 14.9 222 60-303 74-329 (337)
43 2nqt_A N-acetyl-gamma-glutamyl 99.9 1E-26 3.5E-31 222.6 18.5 227 61-303 80-338 (352)
44 1vkn_A N-acetyl-gamma-glutamyl 99.9 1.7E-23 5.8E-28 200.0 14.7 224 60-303 77-337 (351)
45 1nvm_B Acetaldehyde dehydrogen 97.4 0.00014 4.8E-09 67.9 5.4 159 60-223 70-281 (312)
46 2jv8_A Uncharacterized protein 69.5 2.5 8.5E-05 29.5 2.1 34 24-59 8-41 (73)
47 3ic5_A Putative saccharopine d 63.9 4.4 0.00015 30.0 2.8 33 60-92 68-100 (118)
48 3c8m_A Homoserine dehydrogenas 41.9 17 0.00059 33.4 3.5 32 60-93 85-120 (331)
49 2dc1_A L-aspartate dehydrogena 39.8 15 0.00052 31.5 2.6 85 60-151 49-136 (236)
50 3cea_A MYO-inositol 2-dehydrog 39.3 27 0.00092 31.5 4.3 34 61-95 71-104 (346)
51 2v1y_A Phosphatidylinositol-4, 39.1 51 0.0018 25.6 5.2 46 207-254 26-72 (108)
52 3gdo_A Uncharacterized oxidore 39.0 30 0.001 31.6 4.7 36 60-96 64-99 (358)
53 3kux_A Putative oxidoreductase 36.8 31 0.001 31.4 4.3 35 60-95 66-100 (352)
54 1j5p_A Aspartate dehydrogenase 36.8 20 0.00068 32.1 2.9 91 51-152 53-147 (253)
55 1f06_A MESO-diaminopimelate D- 36.8 22 0.00076 32.2 3.3 35 60-95 57-91 (320)
56 2ejw_A HDH, homoserine dehydro 34.9 28 0.00096 32.2 3.7 31 61-93 66-97 (332)
57 1o9a_B FNBB, fibronectin bindi 34.1 5.8 0.0002 24.1 -0.7 20 270-289 14-33 (36)
58 3c1a_A Putative oxidoreductase 34.1 39 0.0013 30.1 4.5 36 60-96 68-103 (315)
59 3keo_A Redox-sensing transcrip 34.0 46 0.0016 28.8 4.7 38 59-96 146-183 (212)
60 3ing_A Homoserine dehydrogenas 33.9 43 0.0015 30.7 4.8 32 60-93 81-116 (325)
61 1lc0_A Biliverdin reductase A; 33.7 36 0.0012 30.3 4.2 36 60-96 64-99 (294)
62 3i23_A Oxidoreductase, GFO/IDH 33.6 37 0.0013 30.8 4.3 35 60-95 64-98 (349)
63 3euw_A MYO-inositol dehydrogen 33.6 33 0.0011 30.9 4.0 36 60-96 64-99 (344)
64 3db2_A Putative NADPH-dependen 33.6 42 0.0014 30.4 4.7 36 60-96 65-100 (354)
65 4hkt_A Inositol 2-dehydrogenas 33.3 37 0.0013 30.4 4.2 35 61-96 63-97 (331)
66 3mtj_A Homoserine dehydrogenas 32.9 35 0.0012 32.9 4.1 34 60-94 77-111 (444)
67 2duw_A Putative COA-binding pr 32.8 35 0.0012 27.2 3.6 40 51-93 63-102 (145)
68 3ezy_A Dehydrogenase; structur 31.9 42 0.0014 30.3 4.3 35 61-96 64-98 (344)
69 3e9m_A Oxidoreductase, GFO/IDH 31.7 37 0.0013 30.6 3.9 36 60-96 66-101 (330)
70 3o9z_A Lipopolysaccaride biosy 31.4 42 0.0014 30.1 4.3 37 59-96 70-106 (312)
71 3ohs_X Trans-1,2-dihydrobenzen 31.3 42 0.0014 30.1 4.2 36 60-96 65-100 (334)
72 3oa2_A WBPB; oxidoreductase, s 31.2 46 0.0016 30.0 4.5 37 59-96 71-107 (318)
73 3oqb_A Oxidoreductase; structu 31.1 59 0.002 29.7 5.3 35 60-95 82-116 (383)
74 3e18_A Oxidoreductase; dehydro 31.1 43 0.0015 30.6 4.3 36 60-96 64-99 (359)
75 3ff4_A Uncharacterized protein 30.8 28 0.00097 27.3 2.6 38 51-92 52-89 (122)
76 3evn_A Oxidoreductase, GFO/IDH 30.6 45 0.0016 29.9 4.3 36 60-96 66-101 (329)
77 3mz0_A Inositol 2-dehydrogenas 29.8 43 0.0015 30.2 4.0 36 60-96 65-100 (344)
78 3e82_A Putative oxidoreductase 29.8 45 0.0016 30.5 4.2 35 60-95 66-100 (364)
79 3do5_A HOM, homoserine dehydro 29.4 47 0.0016 30.5 4.2 32 60-93 79-114 (327)
80 2ho3_A Oxidoreductase, GFO/IDH 29.1 51 0.0017 29.4 4.4 35 60-95 61-95 (325)
81 1p9l_A Dihydrodipicolinate red 29.0 45 0.0015 29.3 3.9 86 61-162 45-141 (245)
82 1zh8_A Oxidoreductase; TM0312, 29.0 49 0.0017 29.9 4.3 36 60-96 81-116 (340)
83 3ec7_A Putative dehydrogenase; 28.8 49 0.0017 30.2 4.3 36 60-96 86-121 (357)
84 2p2s_A Putative oxidoreductase 28.2 51 0.0018 29.5 4.2 36 60-96 65-100 (336)
85 3fhl_A Putative oxidoreductase 28.0 54 0.0019 29.9 4.4 36 60-96 64-99 (362)
86 2glx_A 1,5-anhydro-D-fructose 27.6 49 0.0017 29.5 4.0 34 61-95 62-95 (332)
87 2dt5_A AT-rich DNA-binding pro 27.6 46 0.0016 28.6 3.6 36 61-96 140-175 (211)
88 3bio_A Oxidoreductase, GFO/IDH 27.1 29 0.00099 31.2 2.3 27 60-86 64-90 (304)
89 1ydw_A AX110P-like protein; st 27.0 52 0.0018 29.9 4.1 34 61-95 71-104 (362)
90 1tlt_A Putative oxidoreductase 26.9 51 0.0017 29.3 3.9 36 60-96 64-99 (319)
91 3f4l_A Putative oxidoreductase 26.8 52 0.0018 29.7 4.0 36 60-96 64-99 (345)
92 3uuw_A Putative oxidoreductase 26.1 54 0.0018 29.0 3.9 35 61-96 66-100 (308)
93 3q2i_A Dehydrogenase; rossmann 25.1 57 0.002 29.5 4.0 36 60-96 74-109 (354)
94 3moi_A Probable dehydrogenase; 25.0 59 0.002 30.0 4.1 36 60-96 63-98 (387)
95 1r0k_A 1-deoxy-D-xylulose 5-ph 24.7 59 0.002 30.8 4.0 30 62-93 94-123 (388)
96 4gj1_A 1-(5-phosphoribosyl)-5- 24.7 37 0.0013 29.7 2.5 34 66-99 78-111 (243)
97 3abi_A Putative uncharacterize 24.6 44 0.0015 30.6 3.1 33 60-94 76-108 (365)
98 1y81_A Conserved hypothetical 24.4 49 0.0017 26.2 2.9 41 51-94 62-102 (138)
99 3rc1_A Sugar 3-ketoreductase; 23.4 71 0.0024 29.0 4.3 36 60-96 88-123 (350)
100 2rbg_A Putative uncharacterize 23.1 29 0.00099 27.5 1.3 27 224-250 71-97 (126)
101 1h6d_A Precursor form of gluco 23.1 69 0.0024 30.2 4.2 34 61-95 150-183 (433)
102 2ixa_A Alpha-N-acetylgalactosa 22.9 70 0.0024 30.1 4.3 36 60-96 90-125 (444)
103 4ew6_A D-galactose-1-dehydroge 22.8 48 0.0016 30.0 3.0 36 60-96 80-115 (330)
104 1dih_A Dihydrodipicolinate red 22.4 44 0.0015 29.8 2.6 33 61-94 72-104 (273)
105 2jov_A Hypothetical protein CP 22.0 1.4E+02 0.0048 22.1 4.8 39 197-237 4-43 (85)
106 1iuk_A Hypothetical protein TT 21.2 32 0.0011 27.4 1.2 40 52-94 64-103 (140)
107 2vt3_A REX, redox-sensing tran 20.3 88 0.003 26.9 4.0 34 63-96 147-180 (215)
108 1xea_A Oxidoreductase, GFO/IDH 20.3 86 0.0029 27.9 4.1 36 60-96 62-97 (323)
No 1
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=6.6e-114 Score=818.35 Aligned_cols=303 Identities=62% Similarity=1.018 Sum_probs=296.9
Q ss_pred cccCCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHH
Q 021899 2 YIVYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAH 81 (306)
Q Consensus 2 ~~~~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h 81 (306)
+-|+.|+++|+|||||||+||+|+ ++|+++++ +|.|||++|+|+++++|+++||+++|+||||||||.|+++|+|+.|
T Consensus 37 nDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~h 114 (346)
T 3h9e_O 37 NDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDH 114 (346)
T ss_dssp ECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSSGGGCCGGGGTSCEEEECSSSCCSHHHHHHH
T ss_pred eCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecCChhhCCcccccccEEEEeccccCCHHHHHHH
Confidence 457899999999999999999999 99999988 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCCeEEeeCCCCCCCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccC
Q 021899 82 LKGGAKKVVISAPSKDAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDG 160 (306)
Q Consensus 82 ~~aGakkvvIsaps~d~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~ 160 (306)
+++||||||||+||+|+||||||||++.|++ +++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+
T Consensus 115 l~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg 194 (346)
T 3h9e_O 115 ISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDG 194 (346)
T ss_dssp HHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSC
T ss_pred HHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHHHHHHHHHhCeeEEEEeeeeeccCccccccC
Confidence 9999999999999999999999999999997 789999999999999999999999999999999999999999999999
Q ss_pred CCccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcc
Q 021899 161 PSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKL 240 (306)
Q Consensus 161 ~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~l 240 (306)
++++|||++|++++||||++||++|+++||+|||+||++|+|+||||++||++||+|+++|++++|||+++|+++++++|
T Consensus 195 ~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~l 274 (346)
T 3h9e_O 195 PSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPM 274 (346)
T ss_dssp CCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTT
T ss_pred CCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcccccceeEEEEEEECCcCCHHHHHHHHHHhccCcc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhcC
Q 021899 241 KGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA 306 (306)
Q Consensus 241 kgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~~ 306 (306)
||||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++++
T Consensus 275 kgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~~~ 340 (346)
T 3h9e_O 275 AGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSRDA 340 (346)
T ss_dssp TTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCCcchHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999998653
No 2
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=6.5e-114 Score=814.44 Aligned_cols=298 Identities=66% Similarity=1.072 Sum_probs=293.5
Q ss_pred cCCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHh
Q 021899 4 VYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK 83 (306)
Q Consensus 4 ~~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~ 83 (306)
|++|+++|+|||||||+||+|+ ++|+++++ +|.|||++|+|+++++|+++||+++|+|||+||||.|+++|+|++|++
T Consensus 34 ~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~ 111 (332)
T 3pym_A 34 PFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHID 111 (332)
T ss_dssp TTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSSGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHH
T ss_pred CCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeecccccCCccccCccEEEEecccccCHHHHHHHHH
Confidence 5789999999999999999999 99999988 999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEeeCCCCCCCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCc
Q 021899 84 GGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM 163 (306)
Q Consensus 84 aGakkvvIsaps~d~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~ 163 (306)
+||||||||+|++|+||||||||++.|+++++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|++++
T Consensus 112 aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~ 191 (332)
T 3pym_A 112 AGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSH 191 (332)
T ss_dssp TTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCT
T ss_pred cCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHHHHHHHhcCeEEEEEEEEeeccccchhccCCCc
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999988
Q ss_pred cccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccccc
Q 021899 164 KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGI 243 (306)
Q Consensus 164 ~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgi 243 (306)
+|||++|++++||||++||++|+++||||||+||++|+|+||||++||++||+|+++|++++|||+++|+++++++||||
T Consensus 192 kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgi 271 (332)
T 3pym_A 192 KDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGV 271 (332)
T ss_dssp TCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTT
T ss_pred ccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCcEeeEEEEEECCcCCHHHHHHHHHHhccCccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhh
Q 021899 244 LGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 244 l~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~ 303 (306)
|+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||++
T Consensus 272 l~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~ 331 (332)
T 3pym_A 272 LGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVAK 331 (332)
T ss_dssp EEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred eEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECCccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999975
No 3
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.5e-113 Score=813.48 Aligned_cols=301 Identities=84% Similarity=1.294 Sum_probs=295.1
Q ss_pred cCCChhHHhhhhhcccccccCCCc-cEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHH
Q 021899 4 VYFEINMQTYMFKYDSVHGQWKHN-ELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHL 82 (306)
Q Consensus 4 ~~~~~~~~ayll~yDS~hg~~~~~-~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~ 82 (306)
||+|+++|+|||||||+||+|+ + +|+++++++|.|||++|+|+++++|+++||+++|+|||+||||.|+++|+|++|+
T Consensus 36 ~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl 114 (337)
T 3v1y_O 36 PFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHL 114 (337)
T ss_dssp TTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEECCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHH
T ss_pred CCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEEEecCcccCCccccCCcEEEEeccccCCHHHHHHHH
Confidence 5789999999999999999999 9 9999877589999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeeCCCCCCCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 83 KGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 83 ~aGakkvvIsaps~d~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
++||||||||+|++|+||||||||++.|+++++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++
T Consensus 115 ~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~ 194 (337)
T 3v1y_O 115 KGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPS 194 (337)
T ss_dssp HTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCC
T ss_pred HcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHHHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999998
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
.+||||+|++++||||++||++|+++||||||+||++|+|+||||++||++||+|+++|++++|||+++|+++++++|||
T Consensus 195 ~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkg 274 (337)
T 3v1y_O 195 SKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKG 274 (337)
T ss_dssp TTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTBT
T ss_pred cccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCCCCcEEEEEEEEECCCCcHHHHHHHHHHhccCccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~ 305 (306)
||+|+|+|+||+||+|++||||||+.+|++++|+|+||++||||||||||||+||+.||++++
T Consensus 275 il~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~~ 337 (337)
T 3v1y_O 275 IIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337 (337)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHCC
T ss_pred eeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEECCccchHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999999864
No 4
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=2.1e-112 Score=806.30 Aligned_cols=297 Identities=46% Similarity=0.808 Sum_probs=279.0
Q ss_pred CChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCC
Q 021899 6 FEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGG 85 (306)
Q Consensus 6 ~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aG 85 (306)
+|+++|+|||||||+||+|+ ++|+++++ +|.|||++|+|+++++|+++||+++|+|||+||||.|+++|+|+.|+++|
T Consensus 38 ~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aG 115 (345)
T 4dib_A 38 YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAG 115 (345)
T ss_dssp SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCSCGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTT
T ss_pred CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecCChhhCCccccCccEEEEeccCcCCHHHHHHHHHCC
Confidence 69999999999999999999 99999988 99999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeeCCCC-CCCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCc
Q 021899 86 AKKVVISAPSK-DAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM 163 (306)
Q Consensus 86 akkvvIsaps~-d~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~ 163 (306)
|||||||+|++ |+||||||||++.|++ .++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++
T Consensus 116 AkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~- 194 (345)
T 4dib_A 116 AKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH- 194 (345)
T ss_dssp CSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECC------------
T ss_pred CCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHHHHHHHHHhcCeEEEEEEeeeeccCCceeccccc-
Confidence 99999999998 5899999999999997 68999999999999999999999999999999999999999999999987
Q ss_pred cccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccccc
Q 021899 164 KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGI 243 (306)
Q Consensus 164 ~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgi 243 (306)
+|||++|++++||||++||++|+++||||||+||++|+|+||||++||++||+|+++|++++|||+++|+++++++||||
T Consensus 195 kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~As~g~lkgi 274 (345)
T 4dib_A 195 KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGI 274 (345)
T ss_dssp --CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSSEEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTT
T ss_pred cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcccEEEEEEEEECCCCCHHHHHHHHHHhhcCcccce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899 244 LGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305 (306)
Q Consensus 244 l~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~ 305 (306)
|+|+|+|+||+||+|++||||||+.+|++++|+|+||++||||||||||||+||+.||++++
T Consensus 275 l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~Gys~r~~dl~~~~~~~~ 336 (345)
T 4dib_A 275 VEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWGYSRRVVDLVTLVVDEL 336 (345)
T ss_dssp EEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETTHHHHHHHHHHHHHHHHHH
T ss_pred eeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCCcchHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999998754
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=5.3e-112 Score=802.25 Aligned_cols=295 Identities=49% Similarity=0.820 Sum_probs=290.3
Q ss_pred CChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCC
Q 021899 6 FEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGG 85 (306)
Q Consensus 6 ~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aG 85 (306)
+|+++|+|||||||+||+|+ ++|+++++ +|.|||++|+|+++++|+++||+++|+|||+||||.|+++|+|++|+++|
T Consensus 38 ~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aG 115 (335)
T 3doc_A 38 GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVHAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAG 115 (335)
T ss_dssp SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEECCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTT
T ss_pred CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEEeecccccccccccCCCEEEEccCccCCHHHHHHHHHcC
Confidence 69999999999999999999 99999988 99999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeeCCCCC-CCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCcc
Q 021899 86 AKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMK 164 (306)
Q Consensus 86 akkvvIsaps~d-~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~ 164 (306)
|||||||+|++| +||||||||++.|+++++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++ +
T Consensus 116 AkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-k 194 (335)
T 3doc_A 116 AKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-K 194 (335)
T ss_dssp CSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-S
T ss_pred CCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhhHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-c
Confidence 999999999987 79999999999999888999999999999999999999999999999999999999999999986 8
Q ss_pred ccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccccc
Q 021899 165 DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGIL 244 (306)
Q Consensus 165 d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil 244 (306)
|||++|++++||||++||++|+++||||||+||++|+|+||||++||++||+|+++|++++|||+++|+++++++|||||
T Consensus 195 d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil 274 (335)
T 3doc_A 195 DLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTPNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGIL 274 (335)
T ss_dssp STTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTE
T ss_pred cccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEeccccccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhh
Q 021899 245 GYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 245 ~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~ 303 (306)
+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||++
T Consensus 275 ~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~ 333 (335)
T 3doc_A 275 GYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNEWGFSSRMSDTAVALGK 333 (335)
T ss_dssp EEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred EEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcCccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999986
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=1.4e-112 Score=811.25 Aligned_cols=300 Identities=58% Similarity=0.970 Sum_probs=293.3
Q ss_pred cCCChhHHhhhhhcccccccCCCccEEE--------eCceeEEECCEeEEEEe-ccCCCCCCCccCCccEEEEecCCCCC
Q 021899 4 VYFEINMQTYMFKYDSVHGQWKHNELKV--------KDEKTLLFGEKPVAVFG-FRNPEEIPWAKTGAEYVVESTGVFTD 74 (306)
Q Consensus 4 ~~~~~~~~ayll~yDS~hg~~~~~~v~~--------~~g~~l~~~g~~i~v~~-~~~~~~~~w~~~gvdiV~e~tG~~~s 74 (306)
|++|+++|+|||||||+||+|+ ++|++ +++ +|.|||++|+|++ +++|+++||+++|+||||||||.|++
T Consensus 39 ~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~-~l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s 116 (359)
T 3ids_C 39 MNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDD-TLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTA 116 (359)
T ss_dssp SSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCC-EEEETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCB
T ss_pred CCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCC-EEEECCEEEEEEEccCCcccCCccccCccEEEEeccccCC
Confidence 6889999999999999999999 99999 555 9999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCCeEEeeCCCC-CCCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHH-hhhcCeeEEEEeeeecc
Q 021899 75 KDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSI 151 (306)
Q Consensus 75 ~e~a~~h~~aGakkvvIsaps~-d~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L-~~~fgI~~~~~tT~ha~ 151 (306)
+|+|+.|+++||||||||+|++ |+||||||||++.|++ +++||||||||||||+|++|+| ||+|||+++.||||||+
T Consensus 117 ~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~ 196 (359)
T 3ids_C 117 KAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSY 196 (359)
T ss_dssp HHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeec
Confidence 9999999999999999999998 7999999999999997 7899999999999999999999 99999999999999999
Q ss_pred CCccccccCCCccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHH
Q 021899 152 TATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNA 231 (306)
Q Consensus 152 t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~ 231 (306)
|++|+++|+++.+||||+|++++||||++||++|+++||+|||+||++|+||||||++||++||+|+++|++++|||+++
T Consensus 197 T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~ 276 (359)
T 3ids_C 197 TATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAA 276 (359)
T ss_dssp CTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHH
T ss_pred cchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhcCceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHH
Confidence 99999999998789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCcccccccccCcceEeeccCCCCceeEEeCCCceeec----CCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899 232 IKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALS----KNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305 (306)
Q Consensus 232 l~~a~~~~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~----~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~ 305 (306)
|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++ |+|+|+++||||||||||||+||+.||++++
T Consensus 277 lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~~ 354 (359)
T 3ids_C 277 LKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKD 354 (359)
T ss_dssp HHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHHHSSCTTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCccCCceeEecCCEEeeecCCCCcceeEecccceeecccCCCCEEEEeEEECCCcchHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999999999865
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=3.4e-110 Score=790.06 Aligned_cols=296 Identities=44% Similarity=0.719 Sum_probs=289.2
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
++|+++|+|||||||+||+|+ ++|+++++ +|.|||++|+|+++++|+++||+++|+|||+||||.|+++|+|++|+++
T Consensus 37 ~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~a 114 (338)
T 3lvf_P 37 LTDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEA 114 (338)
T ss_dssp SSCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECCSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHT
T ss_pred CCCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEecccccCCccccCCCEEEEccCCcCCHHHHHHHHHc
Confidence 679999999999999999999 99999998 9999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeCCCC-CCCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCc
Q 021899 85 GAKKVVISAPSK-DAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM 163 (306)
Q Consensus 85 GakkvvIsaps~-d~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~ 163 (306)
||||||||+|++ |+||||||||++.|+++++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++.
T Consensus 115 GAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~ 194 (338)
T 3lvf_P 115 GAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHR 194 (338)
T ss_dssp TCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCT
T ss_pred CCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCcc
Confidence 999999999998 6999999999999998889999999999999999999999999999999999999999999999986
Q ss_pred c-ccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecC-CCCHHHHHHHHHHhccCccc
Q 021899 164 K-DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEK-EATYEEIKNAIKEESEGKLK 241 (306)
Q Consensus 164 ~-d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~-~~~~e~i~~~l~~a~~~~lk 241 (306)
+ ||||+|++++||||++||++|+++||||||+||++|+|+||||++||++||+|+++| ++++|||+++|+++++++
T Consensus 195 k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~~t~eei~~~lk~As~g~-- 272 (338)
T 3lvf_P 195 KGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNES-- 272 (338)
T ss_dssp TCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCSSCEEEEEEEEESSSSCCHHHHHHHHHHTCCSS--
T ss_pred ccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCCceEEEEEEEEEccCCCCHHHHHHHHHHhhcCC--
Confidence 6 999999999999999999999999999999999999999999999999999999999 999999999999999987
Q ss_pred ccccccCcceEeeccCCCCceeEEeCCCceeec---CCeEEEEEEeCCCchhHhhHHHHHHHHhhhcC
Q 021899 242 GILGYTEEDVVSTDFVGDSRSSIFDAKAGIALS---KNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQA 306 (306)
Q Consensus 242 gil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~---~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~~ 306 (306)
|+|+|+|+||+||+|++||||||+.+|++++ |+|+|+++||||||||||||+||+.||+++-|
T Consensus 273 --l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~~~ 338 (338)
T 3lvf_P 273 --FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK 338 (338)
T ss_dssp --EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEEEEEEECTTHHHHHHHHHHHHHHHHHTC
T ss_pred --cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEEEEEEECCccchHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999 99999999999999999999999999998754
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=6.8e-110 Score=791.94 Aligned_cols=295 Identities=49% Similarity=0.828 Sum_probs=289.0
Q ss_pred CChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCC----HHHHHHH
Q 021899 6 FEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAH 81 (306)
Q Consensus 6 ~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s----~e~a~~h 81 (306)
.|+++|+|||||||+||+|+ ++++.+++ +|.|||++|+|+++++|+++||++.|+|||+||||.|++ +|+|+.|
T Consensus 54 ~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~h 131 (356)
T 3hja_A 54 TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDH 131 (356)
T ss_dssp SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGG
T ss_pred CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEcCChhhCCccccCCCEEEEecccccccchhHHHHHHH
Confidence 68999999999999999999 99999988 999999999999999999999999999999999999999 9999999
Q ss_pred Hh-CCCCeEEeeCCCCC-CCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCcccccc
Q 021899 82 LK-GGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVD 159 (306)
Q Consensus 82 ~~-aGakkvvIsaps~d-~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D 159 (306)
++ +||||||||+||+| +||||||||++.|+++++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|
T Consensus 132 l~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D 211 (356)
T 3hja_A 132 VNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILD 211 (356)
T ss_dssp TTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSS
T ss_pred HHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccchhhhhHhHHHHHHhcCeEEEEEEEEEeccccccccc
Confidence 99 99999999999986 79999999999999888999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEe-cCCCCHHHHHHHHHHhccC
Q 021899 160 GPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRL-EKEATYEEIKNAIKEESEG 238 (306)
Q Consensus 160 ~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~-~~~~~~e~i~~~l~~a~~~ 238 (306)
+++ +||||+|++++||||++||++|+++||||||+||++|+|+||||++||++||+|++ +|++++|||+++|++++++
T Consensus 212 ~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g 290 (356)
T 3hja_A 212 LPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASET 290 (356)
T ss_dssp CCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHS
T ss_pred Ccc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEEcCCCccEeEEEEEEEccCCCCHHHHHHHHHHHhcC
Confidence 987 89999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred c-ccccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhh
Q 021899 239 K-LKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 239 ~-lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~ 303 (306)
+ |||||+|+|+|+||+||+|++||||||+.+|++++|+|+||++||||||||||||+||+.||++
T Consensus 291 ~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 291 PELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp TTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEEEEEEECTTHHHHHHHHHHHHHHC-
T ss_pred chhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEEEEEEECCccchHHHHHHHHHHHhC
Confidence 9 9999999999999999999999999999999999999999999999999999999999999864
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.5e-107 Score=774.73 Aligned_cols=296 Identities=45% Similarity=0.739 Sum_probs=288.8
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
++|+++|+|||||||+||+|+ ++|+.+++ +|.|||++|+++++++|+++||++.|+||||||||.|+++++++.|+++
T Consensus 37 ~~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~a 114 (335)
T 1obf_O 37 LGDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVDANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKG 114 (335)
T ss_dssp SSCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHH
T ss_pred CCCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEEEcCCcccCCccccCCCEEEEccCccccHHHHHHHHHc
Confidence 368999999999999999999 89999977 9999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeCCCC-CCC-eEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 85 GAKKVVISAPSK-DAP-MFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 85 GakkvvIsaps~-d~p-~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
||||||||+|++ |+| |||||||++.|++.++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++
T Consensus 115 GakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~ 194 (335)
T 1obf_O 115 GAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCLAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH 194 (335)
T ss_dssp TCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC
T ss_pred CCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHHHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc
Confidence 999999999998 799 999999999999777899999999999999999999999999999999999999999999986
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
+|||++|++++||||++||++|+++||||+|+||++|+|+||||++||++||+|++++++++|||+++|+++++++|||
T Consensus 195 -~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkg 273 (335)
T 1obf_O 195 -EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPTINVSIVDLSFVAKRNTTVEEVNGILKAASEGELKG 273 (335)
T ss_dssp -SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTT
T ss_pred -cccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeeccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
||+|+|+|+||+||+|++||||||+.+|++ +|+|+|+++||||||||||||+||+.||+++
T Consensus 274 il~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDNE~gys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 274 ILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDNEWGFSNRMLDTTVALMSA 334 (335)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred eecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeCCCcchHhHHHHHHHHHhcc
Confidence 999999999999999999999999999999 9999999999999999999999999999754
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=9.3e-108 Score=777.81 Aligned_cols=298 Identities=65% Similarity=1.037 Sum_probs=290.7
Q ss_pred cCCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHh
Q 021899 4 VYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK 83 (306)
Q Consensus 4 ~~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~ 83 (306)
|++++++++|||||||+||+|+ ++|+.+++ +|.|||++|+|+++++|+++||++.|+||||||||.|+++|+++.|++
T Consensus 44 ~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~ 121 (345)
T 2b4r_O 44 PFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLK 121 (345)
T ss_dssp TTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHH
T ss_pred CCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEEcCCcccCcccccCCCEEEECcCccccHhhHHHHHH
Confidence 6789999999999999999999 89999987 999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEeeCCCCC-CCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 84 GGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 84 aGakkvvIsaps~d-~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
+||||||||+|++| +||||||||++.|++.++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++
T Consensus 122 aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~Lap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~ 201 (345)
T 2b4r_O 122 GGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPS 201 (345)
T ss_dssp TTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCC
T ss_pred CCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHHHHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccc
Confidence 99999999999986 89999999999999777899999999999999999999999999999999999999999999987
Q ss_pred --ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcc
Q 021899 163 --MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKL 240 (306)
Q Consensus 163 --~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~l 240 (306)
.+||||+|++++||||++||++|+++||||+|+||++|+|+||||++||+++|+|++++++++|||+++|+++++++|
T Consensus 202 ~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~gs~~dltv~lek~~t~eei~~~lk~a~~~~l 281 (345)
T 2b4r_O 202 KGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPL 281 (345)
T ss_dssp GGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTT
T ss_pred cccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhhccc
Confidence 389999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhh
Q 021899 241 KGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 241 kgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~ 303 (306)
||||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||++
T Consensus 282 kgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~WyDNE~gys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 282 KGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 344 (345)
T ss_dssp TTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHC
T ss_pred CCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEEeCCCcchHhHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999964
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=1.4e-106 Score=769.41 Aligned_cols=296 Identities=47% Similarity=0.851 Sum_probs=288.9
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
++|+++++|||||||+||+|+ ++|+.+++ +|.+||++|+++++++|+++||+++|+||||||||.|+++|+++.|+++
T Consensus 35 ~~~~~~~a~ll~yDs~hG~~~-~~v~~~~~-~l~v~Gk~i~v~~~~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~a 112 (342)
T 2ep7_A 35 LTDAKHLAHLLKYDSVHGIFK-GSVEAKDD-SIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQG 112 (342)
T ss_dssp SSCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCSSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGG
T ss_pred CCChHHHhhhhhcccccccCC-CcEEEcCC-EEEECCEEEEEEEcCChhhCCccccCCCEEEECCCchhhhhhhHHHHhc
Confidence 468999999999999999999 89999977 9999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeCCCCCCC-eEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 85 GAKKVVISAPSKDAP-MFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 85 GakkvvIsaps~d~p-~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
||||||||+|++|+| |||||||++.|++ .++||||||||||||+|++|+|||+|||+++.||||||+|++|+++|+++
T Consensus 113 GakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~ 192 (342)
T 2ep7_A 113 GAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH 192 (342)
T ss_dssp TCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC
T ss_pred CCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHHHHHHHHHHHcCeeEEEEEEEeecccchhhhcCCc
Confidence 999999999999999 9999999999997 67899999999999999999999999999999999999999999999985
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecC-CCCHHHHHHHHHHhccC---
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEK-EATYEEIKNAIKEESEG--- 238 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~-~~~~e~i~~~l~~a~~~--- 238 (306)
+||||+|++++||||++||++|+++||||+|+||++|+|+||||++||+++|+|++++ ++++|||+++|++++++
T Consensus 193 -~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~ 271 (342)
T 2ep7_A 193 -KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRE 271 (342)
T ss_dssp -SSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHT
T ss_pred -chhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecccceEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ----cccccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 239 ----KLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 239 ----~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
+|||||+|+|+|+||+||+|++||||||+.+|+++ |+|+|+++||||||||||||+||+.||+++
T Consensus 272 ~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~vk~~~wyDNE~gys~r~~dl~~~~~~~ 340 (342)
T 2ep7_A 272 SGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNLVHIAAWYDNEWGYSCRLRDLVIYLAER 340 (342)
T ss_dssp SCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccCCCeEeeeECCCCccceecccccccc-CCEEEEEEEECCCccchhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999 899999999999999999999999999864
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=5.8e-101 Score=730.80 Aligned_cols=296 Identities=50% Similarity=0.799 Sum_probs=287.8
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
++|+++|+|||+|||+||+|+ ++|+.+++ .|.++|+.|+++++++|++++|++.++|+||||||.|++++++++|+++
T Consensus 32 ~~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~l~w~~~gvDiV~estG~~~s~e~a~~~l~a 109 (331)
T 2g82_O 32 LTDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEG 109 (331)
T ss_dssp SSCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSSGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHT
T ss_pred CCCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCChhhCcccccCCCEEEECCCchhhHHHHHHHHHC
Confidence 468999999999999999999 99998877 9999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeCCCCC-CCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 85 GAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 85 GakkvvIsaps~d-~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
||||||||+|++| +|+||||||++.|++ .++||||||||||||+|++||||++|||+++.|||+||+||+|+++|+++
T Consensus 110 GakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~ 189 (331)
T 2g82_O 110 GAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPH 189 (331)
T ss_dssp TCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHHHHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCC
T ss_pred CCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHHHHHHHHHhcCccEEEEEEEeecccccchhcccc
Confidence 9999999999987 799999999999996 47899999999999999999999999999999999999999999999886
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
+||||+|++++||||+++|++|++.||+|||+||++++|+||||++||+++|++++++++++|||+++|+++++++|||
T Consensus 190 -~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~gs~~dl~v~l~k~~t~eei~~~lk~a~~~~l~g 268 (331)
T 2g82_O 190 -KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKG 268 (331)
T ss_dssp -SSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTT
T ss_pred -ccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCEEEEEEEEEECCCCCHHHHHHHHHHhhcCccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
||+|+|+|+||+||+|++||||||+.+|+++ |+++|+++||||||||||||+||+.||+++
T Consensus 269 il~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~gys~r~~d~~~~~~~~ 329 (331)
T 2g82_O 269 ILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEWGYANRVADLVELVLRK 329 (331)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCchhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999 899999999999999999999999999864
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=9.4e-99 Score=725.47 Aligned_cols=296 Identities=44% Similarity=0.797 Sum_probs=288.8
Q ss_pred CChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCC
Q 021899 6 FEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGG 85 (306)
Q Consensus 6 ~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aG 85 (306)
.++++++|||+|||+||+|. ++|+.+++ .|.++|+.|+++++++|++++|++.++|+||||||.|.+++++++|+++|
T Consensus 38 ~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aG 115 (380)
T 2d2i_A 38 SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAG 115 (380)
T ss_dssp SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEECCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTT
T ss_pred CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEEecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcC
Confidence 58999999999999999999 99999888 89999999999999999999998889999999999999999999999999
Q ss_pred CCeEEeeCCCCC-CC-eEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 86 AKKVVISAPSKD-AP-MFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 86 akkvvIsaps~d-~p-~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
|||||||+|++| +| +||||||++.|++ .++||||||||||||+|++|+||++|||+++.|||+||+|++|+++|+++
T Consensus 116 akkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~ 195 (380)
T 2d2i_A 116 AKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH 195 (380)
T ss_dssp CSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC
T ss_pred CcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHHHHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch
Confidence 999999999987 78 9999999999997 47899999999999999999999999999999999999999999999997
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
++||++|++++||||++||++++++|++|||+||++++|+||||++||+++|++++++++++|||+++|+++++++|||
T Consensus 196 -~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVPt~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~~lkg 274 (380)
T 2d2i_A 196 -RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKG 274 (380)
T ss_dssp -SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTT
T ss_pred -hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEeccCCEEEEEEEEEECCcCCHHHHHHHHHHHhhCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++
T Consensus 275 il~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyDNe~gys~r~~d~~~~~~~~ 336 (380)
T 2d2i_A 275 IIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARK 336 (380)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHTT
T ss_pred ccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEECCCcchHhHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=4.7e-98 Score=712.06 Aligned_cols=298 Identities=47% Similarity=0.785 Sum_probs=288.6
Q ss_pred CCChhHHhhhhhcccccccCCCccEE-EeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHh
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELK-VKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK 83 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~-~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~ 83 (306)
++|+++|+|||+|||+||+|. ++|+ .+++ .|.++|+.|+++++++|+++||++.++|+||||||.|.+++++++|++
T Consensus 36 ~~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~~~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~ 113 (337)
T 1rm4_O 36 TGGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQ 113 (337)
T ss_dssp TTCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHH
T ss_pred CCCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEEecCChhhCcccccCCCEEEECCCchhhHHHHHHHHH
Confidence 468999999999999999999 8999 6666 899999999999999999999998899999999999999999999999
Q ss_pred CCCCeEEeeCCCCC-CCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 84 GGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 84 aGakkvvIsaps~d-~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
+|||+|++|+|+.| +|+||||||++.|++.++||||||||||||+|++|+||++|||+++.|||+||+||+|+++|+++
T Consensus 114 ~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~lap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~ 193 (337)
T 1rm4_O 114 AGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 193 (337)
T ss_dssp TTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC
T ss_pred cCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHHHHHHHHHHhcCeeEEEEEEEEecCCccchhhcch
Confidence 99999999999886 79999999999998668999999999999999999999999999999999999999999999986
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
+|||++|++++||||++||++++++|++|||+||++++|+||||++||++++++++++++++|||+++|+++++++|||
T Consensus 194 -~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~~gs~~dl~~~l~k~~t~eei~~~lk~a~~~~lkg 272 (337)
T 1rm4_O 194 -RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKG 272 (337)
T ss_dssp -SSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTT
T ss_pred -hhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCcCc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~ 305 (306)
||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++.
T Consensus 273 il~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~~ 335 (337)
T 1rm4_O 273 ILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKW 335 (337)
T ss_dssp TEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHTC
T ss_pred eecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECCCccchhhHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999998753
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=3.3e-97 Score=707.50 Aligned_cols=297 Identities=44% Similarity=0.792 Sum_probs=289.0
Q ss_pred CChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCC
Q 021899 6 FEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGG 85 (306)
Q Consensus 6 ~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aG 85 (306)
.++++++|||+|||+||+|. ++|+.+++ .|.++|+.|++++++||++++|++.++|+||||||.|.+++++++|+++|
T Consensus 38 ~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~G 115 (339)
T 3b1j_A 38 SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAG 115 (339)
T ss_dssp SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEECCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTT
T ss_pred CCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEEecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcC
Confidence 58999999999999999999 99999887 89999999999999999999999899999999999999999999999999
Q ss_pred CCeEEeeCCCCC-CC-eEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 86 AKKVVISAPSKD-AP-MFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 86 akkvvIsaps~d-~p-~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
|||||||+|++| +| ++|||||++.|++ .++||||||||||||+|++|+||++|||+++.|||+||+|++|+++|+++
T Consensus 116 akkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~ 195 (339)
T 3b1j_A 116 AKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH 195 (339)
T ss_dssp CSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC
T ss_pred CcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhhHHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch
Confidence 999999999987 78 9999999999997 47899999999999999999999999999999999999999999999987
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
+|||++|++++||||++||+++++.||+|||+||++++|+||||++||++++++++++++++|||+++|+++++++|||
T Consensus 196 -~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP~~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~~~l~g 274 (339)
T 3b1j_A 196 -RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKG 274 (339)
T ss_dssp -SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHSTTBT
T ss_pred -hhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEeccCCEEEEEEEEEEcCcCCHHHHHHHHHHhhcCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~ 305 (306)
||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++.
T Consensus 275 il~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~~ 337 (339)
T 3b1j_A 275 IIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKW 337 (339)
T ss_dssp TEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHTC
T ss_pred ccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeCCCcchHhHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999998753
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=3.8e-97 Score=705.80 Aligned_cols=297 Identities=53% Similarity=0.833 Sum_probs=288.3
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
+.++++++|||+|||+||+|. ++++.+++ .|.++|+.|+++++++|+++||++.++|+||||||.|.+++++++|+++
T Consensus 34 ~~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~ 111 (334)
T 3cmc_O 34 LTDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEA 111 (334)
T ss_dssp SSCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSSGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHT
T ss_pred CCCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecCChhhcCcccCccCEEEECCCchhhHHHHHHHHHC
Confidence 358999999999999999999 89999888 9999999999998999999999999999999999999999999999999
Q ss_pred CCCeEEeeCCCCC-CCeEEcccCccccCC-CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 85 GAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 85 GakkvvIsaps~d-~p~vV~gVN~~~~~~-~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
||||||||+|++| +|++|||||++.|++ .++||||||||||||+|++|||+++|||+++.|||+||+||+|+++|+++
T Consensus 112 Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~ 191 (334)
T 3cmc_O 112 GAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH 191 (334)
T ss_dssp TCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC
T ss_pred CCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHHHHHHHHHhcCceeeeEEEEEeccchhhhccccc
Confidence 9999999999987 799999999999986 47899999999999999999999999999999999999999999999986
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
++||++|++++||||+++|+++|++|+||+|+||++++|+||||++||++++++++++++++|||+++|+++++++|||
T Consensus 192 -~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~gs~~~l~~~l~k~~t~eei~~~lk~a~~~~l~g 270 (334)
T 3cmc_O 192 -KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKG 270 (334)
T ss_dssp -SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTT
T ss_pred -cccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++
T Consensus 271 il~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 271 ILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332 (334)
T ss_dssp TEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCchhhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999865
No 17
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.2e-96 Score=701.79 Aligned_cols=296 Identities=49% Similarity=0.831 Sum_probs=288.0
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
+.|+++++|||+|||+||+|. ++|+.+++ .|.++|+.|+++++++|++++|++.++|+||||||.|.+++.+++|+++
T Consensus 35 ~~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~a 112 (332)
T 1hdg_O 35 LTDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQA 112 (332)
T ss_dssp SSCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECCSSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHT
T ss_pred CCChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEecCChHHCcccccCCCEEEECCccchhHHHHHHHHHc
Confidence 358999999999999999999 89999877 9999999999998899999999988999999999999999999999999
Q ss_pred CCCeEEeeCCCCCCC-eEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCc
Q 021899 85 GAKKVVISAPSKDAP-MFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM 163 (306)
Q Consensus 85 GakkvvIsaps~d~p-~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~ 163 (306)
||||+|||+|++|+| ++|||||++.|++.++||||||||||||+|++|||+++|||+++.|||+||+||+|+++|+++
T Consensus 113 GakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~- 191 (332)
T 1hdg_O 113 GAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH- 191 (332)
T ss_dssp TCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-
T ss_pred CCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHHHHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-
Confidence 999999999999999 999999999998657899999999999999999999999999999999999999999999986
Q ss_pred cccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccccc
Q 021899 164 KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGI 243 (306)
Q Consensus 164 ~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgi 243 (306)
++||++|++++||||+++|+++|++|+||+|+||++++|+||||++||++++++++++++++|||+++|+++++++||||
T Consensus 192 ~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~g~l~~l~~~l~k~~t~eei~~~lk~a~~~~l~gi 271 (332)
T 1hdg_O 192 KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGI 271 (332)
T ss_dssp SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTT
T ss_pred cccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEccccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcccCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhh
Q 021899 244 LGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 244 l~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~ 303 (306)
|+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||++
T Consensus 272 l~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~ 331 (332)
T 1hdg_O 272 IGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELLLK 331 (332)
T ss_dssp EEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTTHHHHHHHHHHHHHGGG
T ss_pred ccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCccchhHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999975
No 18
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=1.5e-96 Score=705.51 Aligned_cols=299 Identities=64% Similarity=1.025 Sum_probs=288.1
Q ss_pred cCCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHh
Q 021899 4 VYFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK 83 (306)
Q Consensus 4 ~~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~ 83 (306)
|+.++++++|||+|||+||+|+ ++++.+++ .|.+||+.|+++++++|++++|++.++|+||||||.|.+++++++|++
T Consensus 50 p~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~ 127 (354)
T 3cps_A 50 PFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLK 127 (354)
T ss_dssp TTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGT
T ss_pred CCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEecCChHHCCcccCCCCEEEECCCchhhHHHHHHHHH
Confidence 6789999999999999999999 99998877 999999999999999999999988899999999999999999999999
Q ss_pred CCCCeEEeeCCCCC-CCeEEcccCccccCCC-CCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCC
Q 021899 84 GGAKKVVISAPSKD-APMFVVGVNEKEYKPE-LDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGP 161 (306)
Q Consensus 84 aGakkvvIsaps~d-~p~vV~gVN~~~~~~~-~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~ 161 (306)
+||||||||+|++| +|++|||||++.|++. .+||||||||||||+|++|||+++|||+++.|||+||+|++|+++|++
T Consensus 128 ~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~ 207 (354)
T 3cps_A 128 GGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGP 207 (354)
T ss_dssp TTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCC
T ss_pred cCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHHHHHHHHHHHhCCeeEEEEEEEecccccchhhhcc
Confidence 99999999999986 7999999999999964 789999999999999999999999999999999999999999999998
Q ss_pred Cc--cccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCc
Q 021899 162 SM--KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGK 239 (306)
Q Consensus 162 ~~--~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~ 239 (306)
+. ++||++|++++||||+++|+++|++|+||+|+||++++++||||++||++++++++++++++|||+++|+++++++
T Consensus 208 ~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rVP~~~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~~ 287 (354)
T 3cps_A 208 SKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGP 287 (354)
T ss_dssp CCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTT
T ss_pred chhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEeccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCC
Confidence 62 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 240 LKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 240 lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
|||||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++
T Consensus 288 lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 288 MKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVASR 352 (354)
T ss_dssp TTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHT
T ss_pred CCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEEEEECCCcchHhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999764
No 19
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.8e-95 Score=693.49 Aligned_cols=295 Identities=65% Similarity=1.033 Sum_probs=286.9
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
+.++++++|||||||+||+|+ ++++.+++ .|.+||+.|+++++++|+++||++.++|+||||||.|.++++++.|+++
T Consensus 34 ~~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~ 111 (330)
T 1gad_O 34 LLDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITA 111 (330)
T ss_dssp SSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSSGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHT
T ss_pred CCChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcCChhhCccccccCCEEEECCCccccHHHHHHHHHC
Confidence 357899999999999999999 99999887 9999999999999999999999988999999999999999999999999
Q ss_pred CCCeEEeeCCCC-CCCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCc
Q 021899 85 GAKKVVISAPSK-DAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM 163 (306)
Q Consensus 85 GakkvvIsaps~-d~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~ 163 (306)
|||+|++|+|.+ |+|++|||||++.|+ .++||||||||||||+|++|||+++|||+++.|||+||+|++|+++|+++.
T Consensus 112 GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~ 190 (330)
T 1gad_O 112 GAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSH 190 (330)
T ss_dssp TCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCS
T ss_pred CCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHHHHHHHHhcCeeEEEEEEEEeccccccccccccc
Confidence 999999999986 479999999999998 688999999999999999999999999999999999999999999999987
Q ss_pred cccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccccc
Q 021899 164 KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGI 243 (306)
Q Consensus 164 ~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgi 243 (306)
++|||+|++++||||+++|+++|+++++|||+||++++|+||||++||++++++++++++++|||+++|+++++++||||
T Consensus 191 ~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~~~l~~~l~k~~t~eei~~~~k~a~~~~l~gi 270 (330)
T 1gad_O 191 KDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGV 270 (330)
T ss_dssp SCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTT
T ss_pred CCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccEEEEEEEEEECCCCCHHHHHHHHHHHhcCCCCCE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHh
Q 021899 244 LGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMA 302 (306)
Q Consensus 244 l~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~ 302 (306)
|+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+
T Consensus 271 l~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~ 329 (330)
T 1gad_O 271 LGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHIS 329 (330)
T ss_dssp EEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHTT
T ss_pred EeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCCchhhhHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999985
No 20
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=7.7e-95 Score=690.97 Aligned_cols=300 Identities=83% Similarity=1.291 Sum_probs=288.3
Q ss_pred cCCChhHHhhhhhcccccccCCCccEEE-eCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHH
Q 021899 4 VYFEINMQTYMFKYDSVHGQWKHNELKV-KDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHL 82 (306)
Q Consensus 4 ~~~~~~~~ayll~yDS~hg~~~~~~v~~-~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~ 82 (306)
|+.++++++|||||||+||+|++++++. +++ .|.+||+.|+++++++|++++|++.++|+||||||.|.+++.+++|+
T Consensus 36 ~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~-~l~~~g~~i~v~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l 114 (337)
T 3e5r_O 36 PFITTDYMTYMFKYDTVHGQWKHSDIKIKDSK-TLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHL 114 (337)
T ss_dssp SSSCHHHHHHHHHCCTTTCCCCSSCEEESSSS-EEEETTEEEEEECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHH
T ss_pred CCCCHHHHHHhhcccccCCCCCCCcEEeecCC-eeEECCeEEEEEecCChHHccccccCCCEEEECCCchhhHHHHHHHH
Confidence 3568899999999999999997237777 666 89999999999999999999998889999999999999999999999
Q ss_pred hCCCCeEEeeCCCCCCCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 83 KGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 83 ~aGakkvvIsaps~d~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
++|+||||||+|++|+|++|||||++.|++.++||||||||||||+|++|||+++|||+++.|||+||+|++|+++|+++
T Consensus 115 ~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~ 194 (337)
T 3e5r_O 115 KGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPS 194 (337)
T ss_dssp HTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC
T ss_pred HcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHHHHHHHHHHhcCccccceeEEEeeccccccccccc
Confidence 99999999999999999999999999998667899999999999999999999999999999999999999999999997
Q ss_pred ccccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccc
Q 021899 163 MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKG 242 (306)
Q Consensus 163 ~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkg 242 (306)
.++||++|++++||||+++|+++|++|++|||+||++++++||||++||++++++++++++++|||+++|+++++++|||
T Consensus 195 ~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~~~l~~~l~k~~t~eei~~~~~~a~~~~l~g 274 (337)
T 3e5r_O 195 SKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKG 274 (337)
T ss_dssp TTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTT
T ss_pred cccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccCCeEEEEEEEEECCCccHHHHHHHHHHHhhCCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 243 ILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 243 il~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||||||||+||+.||+++
T Consensus 275 il~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 275 IIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred cccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEEeCCCcchHhHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999764
No 21
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=2.4e-94 Score=687.38 Aligned_cols=299 Identities=67% Similarity=1.082 Sum_probs=290.1
Q ss_pred CCChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhC
Q 021899 5 YFEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKG 84 (306)
Q Consensus 5 ~~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~a 84 (306)
+.++++++||++|||+||+|+ ++++.+++ .|.+||+.|+++++++|++++|++.++|+||||||.|.+++.+++|+++
T Consensus 37 ~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~a 114 (335)
T 1u8f_O 37 FIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQG 114 (335)
T ss_dssp SSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGG
T ss_pred CCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEecCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhC
Confidence 568999999999999999999 89999887 9999999999999999999999989999999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCcc
Q 021899 85 GAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMK 164 (306)
Q Consensus 85 GakkvvIsaps~d~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~ 164 (306)
|+|+|++|+|++|+|++|||||++.|++.++||||||||||||+|++|||+++|||+++.|||+||+||+|+++|+++.+
T Consensus 115 Gak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~ 194 (335)
T 1u8f_O 115 GAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGK 194 (335)
T ss_dssp TCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTT
T ss_pred CCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHHHHHHHHHhCCcceeEEEEEeccccCcccccccccc
Confidence 99999999998889999999999999866789999999999999999999999999999999999999999999998657
Q ss_pred ccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccccc
Q 021899 165 DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGIL 244 (306)
Q Consensus 165 d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil 244 (306)
+|||+|++++||||+++|++++++|++|||+||++++++||||++||++++++++++++++|||+++|+++++++|||||
T Consensus 195 ~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~~~l~~~l~~~~t~eei~~~~~~a~~~~~~~il 274 (335)
T 1u8f_O 195 LWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGIL 274 (335)
T ss_dssp CGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTE
T ss_pred ccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCccCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhhc
Q 021899 245 GYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 305 (306)
Q Consensus 245 ~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~~ 305 (306)
+|+|+|+||+||+|++||||||+.+|++++|+++|+++||||||||||||+||+.||++++
T Consensus 275 ~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy~~r~~~~~~~~~~~~ 335 (335)
T 1u8f_O 275 GYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335 (335)
T ss_dssp EEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEEcCcchhHhHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999998753
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=9e-95 Score=690.86 Aligned_cols=296 Identities=35% Similarity=0.652 Sum_probs=277.2
Q ss_pred CChhHHhhhhhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCC
Q 021899 6 FEINMQTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGG 85 (306)
Q Consensus 6 ~~~~~~ayll~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aG 85 (306)
.++++++|||+|||+||+|. ++++.+++ .|.++|+.|+++++++|++++|++.++|+||||||.|.+++.+++|+++|
T Consensus 39 ~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~G 116 (339)
T 2x5j_O 39 ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAG 116 (339)
T ss_dssp SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEEEecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcC
Confidence 58899999999999999999 99999887 99999999999999999999998889999999999999999999999999
Q ss_pred CCeEEeeCCC-CCCC-eEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCc
Q 021899 86 AKKVVISAPS-KDAP-MFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM 163 (306)
Q Consensus 86 akkvvIsaps-~d~p-~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~ 163 (306)
+||||||+|+ .|+| ++|||||++.|+++.+||||||||||||+|++|||+++|||+++.|||+||+||+|+++|+++
T Consensus 117 akkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~- 195 (339)
T 2x5j_O 117 AKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH- 195 (339)
T ss_dssp CSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCC-----------
T ss_pred CCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHHHHHHHHHHHHHccCcceeeEEEEEecccccccccccc-
Confidence 9999999999 6889 999999999998756899999999999999999999999999999999999999999999987
Q ss_pred cccccccccccccccCCCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccccc
Q 021899 164 KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGI 243 (306)
Q Consensus 164 ~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgi 243 (306)
+|||++|++++||||+++|++++++|++|+|+||++++++||||++||++++++++++++++|||+++|+++++++||||
T Consensus 196 ~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~~l~gi 275 (339)
T 2x5j_O 196 PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGI 275 (339)
T ss_dssp -CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEECSSCSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTT
T ss_pred ccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEecccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcCCCcE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCCchhHhhHHHHHHHHhhh
Q 021899 244 LGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 244 l~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE~gy~~r~~d~~~~~~~~ 304 (306)
|+|+|+|+||+||+|++||||||+.+|++++|+++|+++||||||||||||+||+.||+++
T Consensus 276 l~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~ 336 (339)
T 2x5j_O 276 VDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATV 336 (339)
T ss_dssp EEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEEEECHHHHHHHHHHHHHHHHHCC
T ss_pred EcccCCcccccccCCCCCceEEEcccceeccCCEEEEEEEeCCCcccHhHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999764
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=7.1e-51 Score=388.82 Aligned_cols=206 Identities=17% Similarity=0.159 Sum_probs=185.4
Q ss_pred ChhHHhhhhhcc--cccccC--CCccE-EEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHH-H
Q 021899 7 EINMQTYMFKYD--SVHGQW--KHNEL-KVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAA-A 80 (306)
Q Consensus 7 ~~~~~ayll~yD--S~hg~~--~~~~v-~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~-~ 80 (306)
++++++|||+|| |+||+| + +++ +.+++ .+.++|. ++++.| ++|+||||||.+.+++.++ .
T Consensus 36 ~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~~---------~~~~~~---~vDiV~eatg~~~s~~~a~~~ 101 (343)
T 2yyy_A 36 KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEGT---------ILDIIE---DADIVVDGAPKKIGKQNLENI 101 (343)
T ss_dssp SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCCB---------GGGTGG---GCSEEEECCCTTHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECCc---------hHHhcc---CCCEEEECCCccccHHHHHHH
Confidence 478999999999 999999 5 566 55555 6777763 344446 7999999999999999996 9
Q ss_pred HHhCCCCeEEeeCCCC-C-CC-eEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCcccc
Q 021899 81 HLKGGAKKVVISAPSK-D-AP-MFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT 157 (306)
Q Consensus 81 h~~aGakkvvIsaps~-d-~p-~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~ 157 (306)
|+++| ++||+++|++ | +| +||||||++.|++ ++||||||||||||+|++|+||++|||+++.||||||+|+.+
T Consensus 102 ~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~~-- 177 (343)
T 2yyy_A 102 YKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVVSCNTTGLCRILYAINSIADIKKARIVLVRRAADPN-- 177 (343)
T ss_dssp TTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEECCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCTT--
T ss_pred HHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEeccchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCcC--
Confidence 99999 4599999887 5 79 9999999999985 789999999999999999999999999999999999999821
Q ss_pred ccCCCccccccccccccccccC----CCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHH
Q 021899 158 VDGPSMKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIK 233 (306)
Q Consensus 158 ~D~~~~~d~r~~r~~a~NiiP~----~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~ 233 (306)
+++|++++||||+ ++|++|+++|++|+++||++++|+||||++||+++++++|++++++|||+++|+
T Consensus 178 ---------~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gkl~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 248 (343)
T 2yyy_A 178 ---------DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGKILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIK 248 (343)
T ss_dssp ---------CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTSEEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHH
T ss_pred ---------cchhhHHhcccCCCCCCCCcchHHHHHhhhccccceeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 5578999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCc
Q 021899 234 EESEGK 239 (306)
Q Consensus 234 ~a~~~~ 239 (306)
++++..
T Consensus 249 ~a~~v~ 254 (343)
T 2yyy_A 249 KTPRII 254 (343)
T ss_dssp HSTTEE
T ss_pred hCCCCE
Confidence 998753
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=4.5e-44 Score=340.28 Aligned_cols=256 Identities=20% Similarity=0.251 Sum_probs=208.5
Q ss_pred CceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCc
Q 021899 33 DEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNE 107 (306)
Q Consensus 33 ~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~ 107 (306)
.|+.+.++|+.+.+++. +++ +| ++|+||+|+|.+.++++++.|+++|+ +|||+|++ |+|++|||||+
T Consensus 39 ~g~~l~~~g~~i~v~~~-~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~ 110 (331)
T 2yv3_A 39 AGVRLAFRGEEIPVEPL-PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNR 110 (331)
T ss_dssp SSCEEEETTEEEEEEEC-CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCG
T ss_pred CCCEEEEcCceEEEEeC-Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCH
Confidence 45589999999999876 454 58 89999999999999999999999999 78888886 58999999999
Q ss_pred cccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCc------------cccccCCCccccccccccccc
Q 021899 108 KEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSMKDWRGGRAASFN 175 (306)
Q Consensus 108 ~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~------------q~~~D~~~~~d~r~~r~~a~N 175 (306)
+.|+...+|||||||+|||++|+|+||+++|||+++.|||+|++||+ |+++|+++.+++|++|++++|
T Consensus 111 ~~i~~~~~iIanp~C~tt~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~n 190 (331)
T 2yv3_A 111 EKIFQHRGIIANPNCTTAILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFN 190 (331)
T ss_dssp GGGGGCSSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTC
T ss_pred HHhcCCCCEEECCCHHHHHHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcC
Confidence 99986567999999999999999999999999999999999999999 566787766899999999999
Q ss_pred cccCC--------CChhHHH----Hhhh--cccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccc
Q 021899 176 IIPSS--------TGAAKAV----GKVL--PALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLK 241 (306)
Q Consensus 176 iiP~~--------tG~ak~~----~kvl--pel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lk 241 (306)
|+|++ |+.++.+ .|++ |+++ ++++|+|||+++||++++++++++++++|||+++|++++.-.+.
T Consensus 191 iiP~~~~~~~~~ht~e~~~i~~e~~kil~~~~l~--v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~~v~v~ 268 (331)
T 2yv3_A 191 VIPHIDAFQENGYTREEMKVVWETHKIFGDDTIR--ISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLKEAPGVEVV 268 (331)
T ss_dssp CBSCCSCBCTTSCBHHHHHHHHHHHHHTTCTTCE--EEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHTTSTTCCBC
T ss_pred cccccCccccCCCcHHHHHHHHHHHHHhCCCCce--EEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHHcCCCeEEE
Confidence 99999 6665556 7888 7775 99999999999999999999999999999999999986532211
Q ss_pred cc---ccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 242 GI---LGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 242 gi---l~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
.- ..|.+ ..+..|..+-.|--.... ...++.+.++++.||- +|.|-+-|-.++.|.+
T Consensus 269 ~~~~~~~~p~----~~~~~g~~~~~igr~~~d-~~~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 269 DEPEAKRYPM----PLTASGKWDVEVGRIRKS-LAFENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp CBTTTTBCCC----HHHHTTCSSEEEEEEEEC-SSSTTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred eCCCcCCCCC----hhhccCCceEEEEEEEEC-CCCCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 00 01111 114455444433211000 0034678999999999 8999999988888754
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.8e-41 Score=322.98 Aligned_cols=260 Identities=20% Similarity=0.202 Sum_probs=190.0
Q ss_pred CceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCc
Q 021899 33 DEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNE 107 (306)
Q Consensus 33 ~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~ 107 (306)
.|+.+.++|+.+.+.. .+++ +|. ++|+||+|+|.+.+++.++.|+++|+ ++||++++ ++|++|||||+
T Consensus 42 ~G~~~~~~~~~i~~~~-~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~ 114 (336)
T 2r00_A 42 EGKTYRFNGKTVRVQN-VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGV--VVIDNTSHFRYDYDIPLVVPEVNP 114 (336)
T ss_dssp TTCEEEETTEEEEEEE-GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCG
T ss_pred CCCceeecCceeEEec-CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCC--EEEEcCCccccCCCCCeEeccCCH
Confidence 4567889999888853 3443 684 89999999999999999999999999 77888876 58999999999
Q ss_pred cccCCC--CCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCcc-ccccCCCc-----------cccccccccc
Q 021899 108 KEYKPE--LDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQ-KTVDGPSM-----------KDWRGGRAAS 173 (306)
Q Consensus 108 ~~~~~~--~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q-~~~D~~~~-----------~d~r~~r~~a 173 (306)
+.|+.. .+|||||||+|||++|+|+||+++|||+++.|||+|++||+| +++|+++. .+++++|+++
T Consensus 115 ~~i~~~~~~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 194 (336)
T 2r00_A 115 EAIAEFRNRNIIANPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIA 194 (336)
T ss_dssp GGGGGGGGTTEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-------------------------
T ss_pred HHhccccCCcEEECCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhh
Confidence 999852 679999999999999999999999999999999999999999 58887653 3789999999
Q ss_pred cccccCCC-----Chh-------HHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCccc
Q 021899 174 FNIIPSST-----GAA-------KAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLK 241 (306)
Q Consensus 174 ~NiiP~~t-----G~a-------k~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lk 241 (306)
+|++|+++ |++ ++..|++|+++++++++|+|||+++||++++++++++++++|||+++|++++.-.
T Consensus 195 ~niip~~~~~~~~gh~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~~~~~v~-- 272 (336)
T 2r00_A 195 FNCIPQIDQFMDNGYTKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLEQTDGIE-- 272 (336)
T ss_dssp ----CCBCTTTCSSCBHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHHHSTTEE--
T ss_pred cCcccccCCcccCCccHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHHhCCCeE--
Confidence 99999985 864 4556778888899999999999999999999999999999999999999854322
Q ss_pred ccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 242 GILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 242 gil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
++...+-|..-.+..|..+-.|--..... ..++.+.++++.||- +|-|-+-+-.++.|.+
T Consensus 273 -v~~~~~~p~~~~~v~g~~~~~vgr~~~d~-~~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~ 333 (336)
T 2r00_A 273 -LFRGADFPTQVRDAGGKDHVLVGRVRNDI-SHHSGINLWVVADNVRKGAATNAVQIAELLVR 333 (336)
T ss_dssp -ECCCCSSGGGCCCCCSSSCEEEEEEEEET-TEEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred -EECCCCCCcCHHHhCCCceEEEEEEEecC-CCCCEEEEEEEehhHHHhHHHHHHHHHHHHHh
Confidence 22211112111144444333331000000 023468899999998 7999888888887754
No 26
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.4e-41 Score=324.19 Aligned_cols=262 Identities=15% Similarity=0.159 Sum_probs=204.5
Q ss_pred CceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC--CCCeEEcccCcccc
Q 021899 33 DEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK--DAPMFVVGVNEKEY 110 (306)
Q Consensus 33 ~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~--d~p~vV~gVN~~~~ 110 (306)
.|+.+.++|+.+.+... +++. |. ++|+||+|+|.+.+++.++.|+++|+|.|.+|++.. ++|++|||||++.|
T Consensus 45 ~g~~~~~~g~~i~~~~~-~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i 119 (340)
T 2hjs_A 45 AGQRMGFAESSLRVGDV-DSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERL 119 (340)
T ss_dssp TTCEEEETTEEEECEEG-GGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGG
T ss_pred CCCccccCCcceEEecC-CHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHH
Confidence 45568899988887643 4543 75 899999999999999999999999997665666553 47999999999999
Q ss_pred CCCC--CEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccc-cccCCCc--ccccc---------cccccccc
Q 021899 111 KPEL--DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSM--KDWRG---------GRAASFNI 176 (306)
Q Consensus 111 ~~~~--~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~-~~D~~~~--~d~r~---------~r~~a~Ni 176 (306)
+... +|||||||+|||++|+|+||+++|||+++.|||+|++||+|+ .+|+++. ++||+ +|++++|+
T Consensus 120 ~~~~~~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ni 199 (340)
T 2hjs_A 120 ASQAAPFLLSSPCAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNL 199 (340)
T ss_dssp GGSCSSCEEECCCHHHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCC
T ss_pred hcCcCCCEEEcCCHHHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCe
Confidence 8632 799999999999999999999999999999999999999994 5776431 45554 57899999
Q ss_pred ccCCC-----ChhHH-------HHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccccc
Q 021899 177 IPSST-----GAAKA-------VGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGIL 244 (306)
Q Consensus 177 iP~~t-----G~ak~-------~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil 244 (306)
+|+++ |+++| +.|++|+++++++++|+|||+++||++++++++++++++|||+++|++++.- -++
T Consensus 200 ip~~~~~~~~gh~~Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~~V---~v~ 276 (340)
T 2hjs_A 200 LAQVGAVDAEGHSAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKGI---EWV 276 (340)
T ss_dssp BSSSSCBCTTSCBHHHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHSTTE---EEC
T ss_pred eccccCcccCCccHHHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHhcCCCc---EEe
Confidence 99987 85544 5678888889999999999999999999999999999999999999975432 222
Q ss_pred cccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCC-CchhHhhHHHHHHHHhh
Q 021899 245 GYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDN-EWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 245 ~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDn-E~gy~~r~~d~~~~~~~ 303 (306)
...+-|-...+..|..+-.|--..... ..++.+.+.+|.|| .+|.|-.-+-.+..|.+
T Consensus 277 ~~~~~p~~~~~v~g~~~~~vgr~r~~~-~~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~ 335 (340)
T 2hjs_A 277 GEGDYPTVVGDALGQDETYVGRVRAGQ-ADPCQVNLWIVSDNVRKGAALNAVLLGELLIK 335 (340)
T ss_dssp CTTCCCCCCCCCTTSSCEEEEEEEECS-SCTTEEEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCccHHHcCCCCEEEEEEEEecC-CCCCEEEEEEEechHHHHHHHHHHHHHHHHHH
Confidence 211112111144554443332211111 13567999999999 99999999988888764
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.3e-41 Score=320.50 Aligned_cols=203 Identities=19% Similarity=0.198 Sum_probs=172.6
Q ss_pred ChhHHhhhhhcc--cccccCCCccE-EEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHh
Q 021899 7 EINMQTYMFKYD--SVHGQWKHNEL-KVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK 83 (306)
Q Consensus 7 ~~~~~ayll~yD--S~hg~~~~~~v-~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~ 83 (306)
+++..+++++|| ++||+|+ +.+ ..++. .+.+++. ++++.| ++|+||+|||.+.+++.++.|++
T Consensus 35 ~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~~---------~~~~~~---~vDvV~~atp~~~~~~~a~~~l~ 100 (337)
T 1cf2_P 35 RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAGT---------VDDMLD---EADIVIDCTPEGIGAKNLKMYKE 100 (337)
T ss_dssp SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCEE---------HHHHHH---TCSEEEECCSTTHHHHHHHHHHH
T ss_pred ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcCC---------HHHHhc---CCCEEEECCCchhhHHHHHHHHH
Confidence 356788999999 9999998 665 33333 4555442 122213 79999999999999999999999
Q ss_pred CCCCeEEeeCCCC-CC--CeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccC
Q 021899 84 GGAKKVVISAPSK-DA--PMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDG 160 (306)
Q Consensus 84 aGakkvvIsaps~-d~--p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~ 160 (306)
+|++ ||+++|.. |+ |++|||||++.+++ .+|||||||+||||+|+|+||+++|||+++.|||+||+|+
T Consensus 101 aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt~l~~~l~pL~~~~gI~~~~vtt~~a~s~------- 171 (337)
T 1cf2_P 101 KGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTTGLCRTLKPLHDSFGIKKVRAVIVRRGAD------- 171 (337)
T ss_dssp HTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSC-------
T ss_pred cCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHHHHHHHHHHHHHhcCcceeEEEEEEEeec-------
Confidence 9974 77766664 34 99999999999985 6899999999999999999999999999999999999987
Q ss_pred CCccccccccccccccccC----CCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhc
Q 021899 161 PSMKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEES 236 (306)
Q Consensus 161 ~~~~d~r~~r~~a~NiiP~----~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~ 236 (306)
+ .+++|++++|++|+ .+++++++.|++ +++ ++++|+||||++||+.++++++++++++|||+++|++++
T Consensus 172 p----~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l~--v~~t~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~~ 244 (337)
T 1cf2_P 172 P----AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DIN--IDTMAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDTP 244 (337)
T ss_dssp T----TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CCC--EEEEEEEESCCSCEEEEEEEEESSCCCHHHHHHHHHHST
T ss_pred C----CccccchhcCEEeccCCCCCcchHHHHhhh-eeE--EEEEEEEcCccCeEEEEEEEEECCCCCHHHHHHHHHhCC
Confidence 2 24567889999999 588999999999 874 999999999999999999999999999999999999987
Q ss_pred cCc
Q 021899 237 EGK 239 (306)
Q Consensus 237 ~~~ 239 (306)
..+
T Consensus 245 ~v~ 247 (337)
T 1cf2_P 245 RVI 247 (337)
T ss_dssp TEE
T ss_pred CcE
Confidence 543
No 28
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=1.7e-40 Score=319.72 Aligned_cols=193 Identities=16% Similarity=0.153 Sum_probs=168.5
Q ss_pred ECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCccccCCC
Q 021899 39 FGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPE 113 (306)
Q Consensus 39 ~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~~~~~~~ 113 (306)
++|+.+.+....++++ |. ++|+||+|+|.+.++++++.|+++|+|++|||+|++ |+|++|||||++.|+..
T Consensus 47 ~~g~~i~~~~~~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~ 122 (367)
T 1t4b_A 47 FGGTTGTLQDAFDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDG 122 (367)
T ss_dssp GGTCCCBCEETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHH
T ss_pred cCCCceEEEecCChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhh
Confidence 4566677776555544 74 899999999999999999999999999999999997 68999999999999752
Q ss_pred --C--CEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccc-c------------------ccCCCcc---ccc
Q 021899 114 --L--DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-T------------------VDGPSMK---DWR 167 (306)
Q Consensus 114 --~--~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~-~------------------~D~~~~~---d~r 167 (306)
. ++|+||||+|+|++|+|+||+++++|+++.||||||+||+|+ . +|+++ + |+|
T Consensus 123 ~~~g~~~Ianp~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~-~~ild~~ 201 (367)
T 1t4b_A 123 LNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPS-SAILDIE 201 (367)
T ss_dssp HHTTCCEEEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTT-CCHHHHH
T ss_pred hhcCCCEEEeCCHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccc-cchhhhh
Confidence 2 699999999999999999999999999999999999999983 2 34444 3 565
Q ss_pred c----------------ccccccccccCCCC------------hhHHHHhhhcc-cCCceEEEEEeeccCcceEEEEEEE
Q 021899 168 G----------------GRAASFNIIPSSTG------------AAKAVGKVLPA-LNGKLTGMSFRVPTVDVSVVDLTVR 218 (306)
Q Consensus 168 ~----------------~r~~a~NiiP~~tG------------~ak~~~kvlpe-l~gki~~~avRVPv~~gs~~dltv~ 218 (306)
| ++++++|+||+++| ..+++.|++++ .+.+++++|+|||+++||+++++++
T Consensus 202 r~~~~~~~~~~~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~ 281 (367)
T 1t4b_A 202 RKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIK 281 (367)
T ss_dssp HHHHHHHHHTCSCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEE
T ss_pred hccccccccccCcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEE
Confidence 5 68999999999987 67777888866 5668999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHHhc
Q 021899 219 LEKEATYEEIKNAIKEES 236 (306)
Q Consensus 219 ~~~~~~~e~i~~~l~~a~ 236 (306)
++++++.|||+++|++++
T Consensus 282 l~~~~t~eei~~~l~~~~ 299 (367)
T 1t4b_A 282 LKKDVSIPTVEELLAAHN 299 (367)
T ss_dssp ESSCCCHHHHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHhcC
Confidence 999999999999999984
No 29
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.2e-36 Score=289.31 Aligned_cols=202 Identities=19% Similarity=0.207 Sum_probs=174.2
Q ss_pred ChhHHhhhhhcc--cccccCCCccE-EEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHh
Q 021899 7 EINMQTYMFKYD--SVHGQWKHNEL-KVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK 83 (306)
Q Consensus 7 ~~~~~ayll~yD--S~hg~~~~~~v-~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~ 83 (306)
+++.+.|+++|| ++||+|+ +.+ ..+++ .+.+.+ +++++.| ++|+|++|||.+.+.+.++.|++
T Consensus 36 ~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~---------d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~ 101 (334)
T 2czc_A 36 KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG---------TLNDLLE---KVDIIVDATPGGIGAKNKPLYEK 101 (334)
T ss_dssp SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC---------BHHHHHT---TCSEEEECCSTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC---------cHHHhcc---CCCEEEECCCccccHHHHHHHHH
Confidence 467889999999 9999998 666 22222 333333 2333334 79999999999999999999999
Q ss_pred CCCCeEEeeCCCC-C-C-CeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccC
Q 021899 84 GGAKKVVISAPSK-D-A-PMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDG 160 (306)
Q Consensus 84 aGakkvvIsaps~-d-~-p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~ 160 (306)
+| |+||+++|.+ | . |++|+|||++.|+. .++|+||||+|+||+|++++|++. |+++.|+|+|++|+.
T Consensus 102 aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~------ 171 (334)
T 2czc_A 102 AG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNTTGLVRTLSAIREY--ADYVYAVMIRRAADP------ 171 (334)
T ss_dssp HT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHHHHHHHHHHHHGGG--EEEEEEEEEEESSCT------
T ss_pred cC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHHHHHHHHHHHHHHH--hccccEEEEEEecCc------
Confidence 99 5699998876 4 4 59999999999974 689999999999999999999987 999999999999984
Q ss_pred CCccccccccccccccccC---CCChhHHHHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhcc
Q 021899 161 PSMKDWRGGRAASFNIIPS---STGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE 237 (306)
Q Consensus 161 ~~~~d~r~~r~~a~NiiP~---~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~ 237 (306)
||++|++++||+|+ .+|+++++++++| |+ ++++|+||||++||++++++++++++++|+++++|+++++
T Consensus 172 -----~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~~~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~ 243 (334)
T 2czc_A 172 -----NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETMAFVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTTR 243 (334)
T ss_dssp -----TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTSTT
T ss_pred -----cccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEEEEEcCCCceEEEEEEEEECCCCCHHHHHHHHHhccC
Confidence 35678999999999 8999999999999 76 9999999999999999999999999999999999999987
Q ss_pred Ccc
Q 021899 238 GKL 240 (306)
Q Consensus 238 ~~l 240 (306)
..+
T Consensus 244 ~~l 246 (334)
T 2czc_A 244 VLL 246 (334)
T ss_dssp EEE
T ss_pred CEe
Confidence 543
No 30
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=5.2e-36 Score=285.77 Aligned_cols=165 Identities=15% Similarity=0.149 Sum_probs=147.1
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCCC--CCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhc
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD--APMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKF 138 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~d--~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~f 138 (306)
++|+||+|||.+.+++.++.|+++|+|++.++++..+ .++||+++|++.+.. .++|+|||||||||+|++|+|+++|
T Consensus 77 ~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~l~~~lk~L~~~~ 155 (340)
T 1b7g_O 77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTALLRTICTVNKVS 155 (340)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHHHHHHHHHHHHhC
Confidence 6999999999999999999999999988888777654 479999999777543 4599999999999999999999999
Q ss_pred CeeEEEEeeeeccCCccccccCCCccccccccccccccccC----CCChhHHHHhhhcccCCceEEEEEeeccCcceEEE
Q 021899 139 GIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVD 214 (306)
Q Consensus 139 gI~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~----~tG~ak~~~kvlpel~gki~~~avRVPv~~gs~~d 214 (306)
||+++.|||+|+++. ++ ++ .|++..||+|+ .+|+++++.+++|+|+ ++++|+||||++||+++
T Consensus 156 gI~~~~~tt~~~~~~-------~~-~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~l~--l~~~a~rVPv~~gh~~~ 222 (340)
T 1b7g_O 156 KVEKVRATIVRRAAD-------QK-EV---KKGPINSLVPDPATVPSHHAKDVNSVIRNLD--IATMAVIAPTTLMHMHF 222 (340)
T ss_dssp CEEEEEEEEEEESSC-------TT-CC---SCCCSSCCEESSSSSSCTHHHHHHTTSTTCE--EEEEEEEESCSSCEEEE
T ss_pred CeEEEEEEEEeccCC-------cc-cc---hHHHHcCCCCCCcCCCCCchhHHHHhCCCCc--EEEEEEEeccCCeEEEE
Confidence 999999999998763 22 33 45788999988 6899999999999986 99999999999999999
Q ss_pred EEEEecCCCCHHHHHHHHHHhccCc
Q 021899 215 LTVRLEKEATYEEIKNAIKEESEGK 239 (306)
Q Consensus 215 ltv~~~~~~~~e~i~~~l~~a~~~~ 239 (306)
+++++++++++|||+++|+++++-+
T Consensus 223 l~v~l~~~~t~eei~~~l~~a~~v~ 247 (340)
T 1b7g_O 223 INITLKDKVEKKDILSVLENTPRIV 247 (340)
T ss_dssp EEEEESSCCCHHHHHHHHHTCTTEE
T ss_pred EEEEECCCCCHHHHHHHHHcCCCCE
Confidence 9999999999999999999988643
No 31
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=1.7e-36 Score=292.49 Aligned_cols=257 Identities=14% Similarity=0.117 Sum_probs=187.3
Q ss_pred eCceeEE-ECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEccc
Q 021899 32 KDEKTLL-FGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGV 105 (306)
Q Consensus 32 ~~g~~l~-~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gV 105 (306)
+.|+++. ++|+.+.+....+++. | .++|+||+|+|.+.+++.++.|+++|||++|||+|++ |+|++||||
T Consensus 42 ~aG~~~~~~~~~~~~v~~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpev 117 (377)
T 3uw3_A 42 NAGGKAPSFAKNETTLKDATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPV 117 (377)
T ss_dssp CTTSBCCTTCCSCCBCEETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHH
T ss_pred hcCCCHHHcCCCceEEEeCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcC
Confidence 3454543 6776555553222222 4 4899999999999999999999999999999999985 479999999
Q ss_pred CccccCCC--C--CEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccc-cccCCC------------------
Q 021899 106 NEKEYKPE--L--DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPS------------------ 162 (306)
Q Consensus 106 N~~~~~~~--~--~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~-~~D~~~------------------ 162 (306)
|++.++.. + ++|+||||+|+|++|+|+||+++|||+++.|||+|++||+|+ +++++.
T Consensus 118 N~~~i~~~~~~~i~~Ianp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~ 197 (377)
T 3uw3_A 118 NLNVIKDALVNGTKNFIGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPA 197 (377)
T ss_dssp HHHHHHHHHHTTCCEEEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTT
T ss_pred CHHHHhhhhhcCCcEEEcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhccccccccccc
Confidence 99998642 3 359999999999999999999999999999999999999993 322111
Q ss_pred ------------------ccccccccccccccccCC-----CChhHHHHhhhccc-------------CCceEEEEEeec
Q 021899 163 ------------------MKDWRGGRAASFNIIPSS-----TGAAKAVGKVLPAL-------------NGKLTGMSFRVP 206 (306)
Q Consensus 163 ------------------~~d~r~~r~~a~NiiP~~-----tG~ak~~~kvlpel-------------~gki~~~avRVP 206 (306)
.+.-.+++++++|++|++ +|+++|+.|+..|+ ..+++++|+|||
T Consensus 198 ~~ild~~~~~~~~~~~~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVP 277 (377)
T 3uw3_A 198 SAILDIDRRVLAAMNGDAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIG 277 (377)
T ss_dssp SCHHHHHHHHHHHHHSTTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCS
T ss_pred cccccccccccccccccccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEec
Confidence 012346788999999997 47788877666554 346999999999
Q ss_pred cCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccccccccCc-------ceEeeccCCCCceeE----EeCCCceeecC
Q 021899 207 TVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEE-------DVVSTDFVGDSRSSI----FDAKAGIALSK 275 (306)
Q Consensus 207 v~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil~~~e~-------~~VS~d~~~~~~s~i----~d~~~~~~~~~ 275 (306)
+++||+..++++++++++.++++++|+++. | ++--+.++ |- -.+..|...-.| .|.. ++
T Consensus 278 v~rGh~~tv~v~~~~~~~~eei~~~l~~~~--p--~V~v~~~~~~~~~~~P~-p~~v~G~n~v~VGrir~d~~-----~~ 347 (377)
T 3uw3_A 278 AMRCHSQALTIKLKKDVPLDEINGILASAN--D--WVKVVPNEREASMRDLS-PAKVTGTLSVPVGRLRKLAM-----GG 347 (377)
T ss_dssp BSSEEEEEEEEEESSCCCHHHHHHHHHTSC--S--SEEECCSSHHHHHHHSS-HHHHTTSSCEEEEEEEECTT-----CT
T ss_pred ccceEEEEEEEEeCCCCCHHHHHHHHHhCC--C--CEEEecCCcccccCCCC-HHHhcCCCcEEEEEEEECCC-----CC
Confidence 999999999999999999999999999872 1 12111111 10 012233322211 0111 13
Q ss_pred CeEEEEEEeCC-CchhHhhHHHHHHHHh
Q 021899 276 NFVKLVSWYDN-EWGYSSRVIDLIVHMA 302 (306)
Q Consensus 276 ~~~k~~~WyDn-E~gy~~r~~d~~~~~~ 302 (306)
+.+.+++==|| -||=|-+.+-.++.|-
T Consensus 348 ~~l~~~~v~DNL~KGAAgqAvqn~nl~~ 375 (377)
T 3uw3_A 348 EYLSAFTVGDQLLWGAAEPLRRMLRILL 375 (377)
T ss_dssp TEEEEEEEEETTCCCCCHHHHHHHHHHH
T ss_pred CEEEEEEEehhhhHhHHHHHHHHHHHHh
Confidence 45666666788 4677777777776664
No 32
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=2e-36 Score=291.36 Aligned_cols=257 Identities=15% Similarity=0.108 Sum_probs=188.6
Q ss_pred CceeEE-ECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccC
Q 021899 33 DEKTLL-FGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVN 106 (306)
Q Consensus 33 ~g~~l~-~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN 106 (306)
.|+++. ++|+.+.+....+++. | .++|+||+|+|.+.+++.++.|+++|||++|||+|++ |+|++|||||
T Consensus 39 aG~~~~~~~~~~~~~~~~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN 114 (370)
T 3pzr_A 39 IGVPAPNFGKDAGMLHDAFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVN 114 (370)
T ss_dssp TTSBCCCSSSCCCBCEETTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHH
T ss_pred cCcCHHHhCCCceEEEecCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCC
Confidence 454543 6776655553222222 3 4899999999999999999999999999999999986 5799999999
Q ss_pred ccccCCC--C--CEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccc-cccCCC-------------------
Q 021899 107 EKEYKPE--L--DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPS------------------- 162 (306)
Q Consensus 107 ~~~~~~~--~--~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~-~~D~~~------------------- 162 (306)
++.++.. + ++||||||+|+|++|+|+||+++|||+++.|||+|++||+|+ +++++.
T Consensus 115 ~~~i~~~~~~~i~~Ianp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~ 194 (370)
T 3pzr_A 115 LKQILHGIHHGTKTFVGGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPAS 194 (370)
T ss_dssp HHHHHHHHHTTCCEEEECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred HHHHhhhhhcCCcEEEcCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhcccccccccccc
Confidence 9998742 3 459999999999999999999999999999999999999993 322111
Q ss_pred -----------------ccccccccccccccccCC-----CChhHHHHhhhccc---------CCceEEEEEeeccCcce
Q 021899 163 -----------------MKDWRGGRAASFNIIPSS-----TGAAKAVGKVLPAL---------NGKLTGMSFRVPTVDVS 211 (306)
Q Consensus 163 -----------------~~d~r~~r~~a~NiiP~~-----tG~ak~~~kvlpel---------~gki~~~avRVPv~~gs 211 (306)
...-.+++++++|++|++ +|+++|+.|+..|+ ..+++++|+|||+++||
T Consensus 195 ~ild~~~~~~~~~~~~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh 274 (370)
T 3pzr_A 195 SILDIDKKVAETMRSGSFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCH 274 (370)
T ss_dssp CHHHHHHHHHHHHHSTTSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEE
T ss_pred ccccccccccccccccccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceE
Confidence 011346778999999997 46788877766554 23699999999999999
Q ss_pred EEEEEEEecCCCCHHHHHHHHHHhccCccccccc--------ccCcceEeeccCCCCceeE----EeCCCceeecCCeEE
Q 021899 212 VVDLTVRLEKEATYEEIKNAIKEESEGKLKGILG--------YTEEDVVSTDFVGDSRSSI----FDAKAGIALSKNFVK 279 (306)
Q Consensus 212 ~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil~--------~~e~~~VS~d~~~~~~s~i----~d~~~~~~~~~~~~k 279 (306)
+..++++++++++.+|++++|+++. |+--++. |. .|. +..|.-...| .|.. +++.+.
T Consensus 275 ~~tv~v~~~~~~~~~ei~~~l~~~~--p~V~v~~~~~~~~~~~P-~p~---~v~G~n~v~VGrir~d~~-----~~~~l~ 343 (370)
T 3pzr_A 275 SQALTIKLKQNIPLDEIEEMIATHN--DWVKVIPNERDITAREL-TPA---KVTGTLSVPVGRLRKMAM-----GDDFLN 343 (370)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHTSC--SSEEECCSCHHHHHHHS-SHH---HHTTSCCEEEEEEEEETT-----EEEEEE
T ss_pred EEEEEEEeCCCCCHHHHHHHHHhCC--CCEEEecCCcccccCCC-CHH---HhcCCccEEEEEEEECCC-----CCCEEE
Confidence 9999999999999999999999872 2111111 11 111 3333322211 0110 123355
Q ss_pred EEEEeCC-CchhHhhHHHHHHHHhhh
Q 021899 280 LVSWYDN-EWGYSSRVIDLIVHMAKT 304 (306)
Q Consensus 280 ~~~WyDn-E~gy~~r~~d~~~~~~~~ 304 (306)
+++==|| -||=|-+.+-.|+.|.+.
T Consensus 344 ~~~v~DNL~KGAAgqAvQn~Nl~~~~ 369 (370)
T 3pzr_A 344 AFTVGDQLLWGAAEPLRRTLRIILAE 369 (370)
T ss_dssp EEEEEETTTTTTHHHHHHHHHHHHHH
T ss_pred EEEEehhhhHhHHHHHHHHHHHHHhc
Confidence 5555788 478888888888777643
No 33
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=2.9e-35 Score=282.93 Aligned_cols=257 Identities=16% Similarity=0.201 Sum_probs=192.1
Q ss_pred eCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccC
Q 021899 32 KDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVN 106 (306)
Q Consensus 32 ~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN 106 (306)
+.|+.+.++|+.+.+... +++ .| .++|+||+|+|.+.+++.++.|+++|+ .|||++++ |+|++|||||
T Consensus 40 saG~~~~~~~~~~~~~~~-~~~--~~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpevN 112 (366)
T 3pwk_A 40 SAGKSLKFKDQDITIEET-TET--AF--EGVDIALFSAGSSTSAKYAPYAVKAGV--VVVDNTSYFRQNPDVPLVVPEVN 112 (366)
T ss_dssp TTTCEEEETTEEEEEEEC-CTT--TT--TTCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHH
T ss_pred cCCCcceecCCCceEeeC-CHH--Hh--cCCCEEEECCChHhHHHHHHHHHHCCC--EEEEcCCccccCCCceEEEccCC
Confidence 457789999988877632 233 35 389999999999999999999999999 78888875 5799999999
Q ss_pred ccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCcc-ccccCCCc---------------cccccc-
Q 021899 107 EKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQ-KTVDGPSM---------------KDWRGG- 169 (306)
Q Consensus 107 ~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q-~~~D~~~~---------------~d~r~~- 169 (306)
++.++...+|||||||+|+|++|+|+||++.|||+++.|+|+|++||+| +.++++.. ....++
T Consensus 113 ~~~i~~~~~iIanpgC~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~ 192 (366)
T 3pwk_A 113 AHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPS 192 (366)
T ss_dssp GGGGTTCCSEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSC
T ss_pred HHHHcCCCCeEECCCcHHHHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCc
Confidence 9999865789999999999999999999999999999999999999999 34332110 001123
Q ss_pred ------cccccccccCC-----CChhHHHHhhhccc-------CCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHH
Q 021899 170 ------RAASFNIIPSS-----TGAAKAVGKVLPAL-------NGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNA 231 (306)
Q Consensus 170 ------r~~a~NiiP~~-----tG~ak~~~kvlpel-------~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~ 231 (306)
+++++|++|.+ +|+++||+|++.|+ ..+++++|+|||+++||+..++++++++++.++++++
T Consensus 193 ~~~HrH~~ia~NviP~I~~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~ 272 (366)
T 3pwk_A 193 GGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAA 272 (366)
T ss_dssp TTSSCCCCCTTCCBCCSSCBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHH
T ss_pred ccccccchhhccccceecccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHH
Confidence 78999999997 58999999877653 3479999999999999999999999999999999999
Q ss_pred HHHhccCccccccccc---CcceEeeccCCCCceeEEeCCCceee---cCCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 232 IKEESEGKLKGILGYT---EEDVVSTDFVGDSRSSIFDAKAGIAL---SKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 232 l~~a~~~~lkgil~~~---e~~~VS~d~~~~~~s~i~d~~~~~~~---~~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
|++++.-. ++... .-|.. .+..|...-.|- . +.. .++.+.+++=-||= +|=|-+-|-.|+.|-+
T Consensus 273 l~~~~~V~---v~~~~~~~~~P~~-~~v~gtn~~~Vg--r--~r~d~~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~ 343 (366)
T 3pwk_A 273 IAAFPGAV---LEDDVAHQIYPQA-INAVGSRDTFVG--R--IRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHE 343 (366)
T ss_dssp HHHSTTEE---ECCBGGGTBCCCH-HHHTTCSSEEEE--E--EEECSSCTTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred HHhCCCcE---EecCcccCCCCch-hHcCCCCEEEEE--E--EEecCCCCCEEEEEEEEccHHHhHHHHHHHHHHHHHH
Confidence 99974211 11110 01111 122333322221 0 011 23557777778994 5666666666666643
No 34
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=3.7e-34 Score=273.23 Aligned_cols=253 Identities=19% Similarity=0.240 Sum_probs=191.1
Q ss_pred eCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccC
Q 021899 32 KDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVN 106 (306)
Q Consensus 32 ~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN 106 (306)
..|+.+.++|+.+.+.... + ..| .++|+||+|+|.+.+++.++.|+++|+ +|||++++ |+|++|||||
T Consensus 39 ~aG~~~~~~~~~~~~~~~~-~--~~~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN 111 (344)
T 3tz6_A 39 SQGRKLAFRGQEIEVEDAE-T--ADP--SGLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVN 111 (344)
T ss_dssp TSSCEEEETTEEEEEEETT-T--SCC--TTCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTS
T ss_pred cCCCceeecCCceEEEeCC-H--HHh--ccCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCC
Confidence 4577899999888776332 3 235 489999999999999999999999999 79999885 5899999999
Q ss_pred c-cccCCC-CCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCcc-ccccCCC----------------c----
Q 021899 107 E-KEYKPE-LDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQ-KTVDGPS----------------M---- 163 (306)
Q Consensus 107 ~-~~~~~~-~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q-~~~D~~~----------------~---- 163 (306)
+ +.++.. .+|||||||+|+|++|+|+||+++|||+++.|||+|++||+| +.++++. .
T Consensus 112 ~~~~i~~~~~~iIanpgC~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (344)
T 3tz6_A 112 FERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALE 191 (344)
T ss_dssp HHHHTTCCTTSEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSC
T ss_pred CHHHhhhcCCCEEECCCcHHHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhcccccccccccccc
Confidence 9 989753 689999999999999999999999999999999999999999 3333221 0
Q ss_pred --cccccccccccccccCC-----CCh--hHHHHhhhcccC-------CceEEEEEeeccCcceEEEEEEEecCCCCHHH
Q 021899 164 --KDWRGGRAASFNIIPSS-----TGA--AKAVGKVLPALN-------GKLTGMSFRVPTVDVSVVDLTVRLEKEATYEE 227 (306)
Q Consensus 164 --~d~r~~r~~a~NiiP~~-----tG~--ak~~~kvlpel~-------gki~~~avRVPv~~gs~~dltv~~~~~~~~e~ 227 (306)
+...++.+.++|++|++ +|+ ++||+|+.-|++ .+++++|+|||+++||+..++++++++++.|+
T Consensus 192 ~~~~~~~~~~~aynv~p~i~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~ee 271 (344)
T 3tz6_A 192 FPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPER 271 (344)
T ss_dssp CCCCSSSSSCCTTCCBCCCSCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHH
T ss_pred ccccccccccccccccccccccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHH
Confidence 11256778999999996 466 788777665443 36999999999999999999999999999999
Q ss_pred HHHHHHHhccCcccccccccCcceEeeccCCCCceeEEeCCCceeec-----CCeEEEEEEeCC-CchhHhhHHHHHHHH
Q 021899 228 IKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALS-----KNFVKLVSWYDN-EWGYSSRVIDLIVHM 301 (306)
Q Consensus 228 i~~~l~~a~~~~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~-----~~~~k~~~WyDn-E~gy~~r~~d~~~~~ 301 (306)
++++|++++.-. ++.|.. |. +..|...-.|- . +..+ ++.+.+++=-|| -+|=|-.-+-.+..|
T Consensus 272 i~~~l~~~p~V~---v~~~P~-p~---~v~gtn~~~Vg--r--ir~d~~~~~~~~l~~~~~~DNL~KGAAg~AVQ~anll 340 (344)
T 3tz6_A 272 ARELLDGATGVQ---LVDVPT-PL---AAAGVDESLVG--R--IRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELL 340 (344)
T ss_dssp HHHHHHHCTTEE---ECSSCC-HH---HHTTCSSEEEE--E--EEECTTSGGGCEEEEEEEECTTTTTTHHHHHHHHHHH
T ss_pred HHHHHhcCCCeE---EECCCC-hH---HhCCCceEEEE--E--EEecCCCCCCCEEEEEEEEcchhHhHHHHHHHHHHHH
Confidence 999999654322 222221 11 22333222221 0 1111 235777777899 467676666666665
Q ss_pred h
Q 021899 302 A 302 (306)
Q Consensus 302 ~ 302 (306)
.
T Consensus 341 ~ 341 (344)
T 3tz6_A 341 T 341 (344)
T ss_dssp T
T ss_pred H
Confidence 4
No 35
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.5e-35 Score=281.91 Aligned_cols=183 Identities=22% Similarity=0.221 Sum_probs=158.1
Q ss_pred CCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCccccCC--
Q 021899 40 GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP-- 112 (306)
Q Consensus 40 ~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~~~~~~-- 112 (306)
+++.+.+. ..+++. | .++|+||+|+|.+.+++.++.|+++|+ .|||+|++ |.|++|||||++.|+.
T Consensus 61 ~~~~~~~~-~~d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e 133 (350)
T 2ep5_A 61 EVQDLPIV-STNYED--H--KDVDVVLSALPNELAESIELELVKNGK--IVVSNASPFRMDPDVPLINPEINWEHLELLK 133 (350)
T ss_dssp HHHTCBEE-CSSGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGGGHH
T ss_pred CCceeEEe-eCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCC--EEEECCccccCCCCCCeeCCccCHHHhcChH
Confidence 34445553 224433 6 389999999999999999999999999 58999986 6899999999998873
Q ss_pred --------CCCEEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCccccccccccccccccCCCCh-
Q 021899 113 --------ELDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA- 183 (306)
Q Consensus 113 --------~~~IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~- 183 (306)
..+|||||||+|+|++|+|+||+++|||+++.|||+|++||+|+. +.+ .+.+++|++|+++|.
T Consensus 134 ~~r~~~~~~~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~e 205 (350)
T 2ep5_A 134 FQKERKGWKGILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GIS------FMAIEGNIIPYIKGEE 205 (350)
T ss_dssp HHHHHHTCSSEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SSB------HHHHTTCCBCCCTTHH
T ss_pred hhhhhcccCceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CCC------ChHHhCCEEeccCCcc
Confidence 236999999999999999999999999999999999999999976 221 457899999999995
Q ss_pred hHHH---HhhhcccCC--------ceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhcc
Q 021899 184 AKAV---GKVLPALNG--------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE 237 (306)
Q Consensus 184 ak~~---~kvlpel~g--------ki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~ 237 (306)
.|.+ .+++|+++| +++++|+|||+++||+++++++++++++.|||+++|+++.+
T Consensus 206 ~k~~~E~~~~l~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~~~ 270 (350)
T 2ep5_A 206 DKIAKELTKLNGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKS 270 (350)
T ss_dssp HHHHHHHHHHTCEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHhhccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhc
Confidence 5554 689999876 79999999999999999999999999999999999999875
No 36
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=7.3e-35 Score=279.70 Aligned_cols=253 Identities=10% Similarity=0.093 Sum_probs=189.9
Q ss_pred hhcccccccCCCccEEEeCceeEEECCEeEEEEeccCCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCC
Q 021899 15 FKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 94 (306)
Q Consensus 15 l~yDS~hg~~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsap 94 (306)
.+||++||+|. +.+ . . .+. +. + ++ .|. ++|+||+|+|.+.+++.++.| ++|+ +|||++
T Consensus 55 ~~~~~~~~~~~-~~v-~--~-dl~-------~~---~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~s 112 (359)
T 1xyg_A 55 QSMESVFPHLR-AQK-L--P-TLV-------SV---K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLS 112 (359)
T ss_dssp SCHHHHCGGGT-TSC-C--C-CCB-------CG---G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECS
T ss_pred CCHHHhCchhc-Ccc-c--c-cce-------ec---c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECC
Confidence 56788888887 543 1 1 121 11 1 22 475 899999999999999999999 9999 789998
Q ss_pred CC---C---------------------CCeEEcccCccccCCCCCEEEcCChhhhhhhhhhHHHhhhcCee--EEEEeee
Q 021899 95 SK---D---------------------APMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTV 148 (306)
Q Consensus 95 s~---d---------------------~p~vV~gVN~~~~~~~~~IVsn~sCtT~~Lap~lk~L~~~fgI~--~~~~tT~ 148 (306)
++ + .+..|||+|++.++. .+|||||||+|||++|+|+||+++|+|+ ++.|+|+
T Consensus 113 a~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~ 191 (359)
T 1xyg_A 113 ADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAK 191 (359)
T ss_dssp STTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEE
T ss_pred ccccCCchhhhhhhhcCCcCChhhcCCceEECCccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEE
Confidence 85 2 234445559999985 6899999999999999999999999999 9999999
Q ss_pred eccCCccc-cccCCCccccccccccccccccCCCChhHHHHhhhcccC---C-------ceEEEEEeeccCcceEEEEEE
Q 021899 149 HSITATQK-TVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALN---G-------KLTGMSFRVPTVDVSVVDLTV 217 (306)
Q Consensus 149 ha~t~~q~-~~D~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvlpel~---g-------ki~~~avRVPv~~gs~~dltv 217 (306)
|++||+|+ .+|+++ .+ .++.|++|+.+|. .+.+||++ + +++++++|||+++||+.++++
T Consensus 192 ~~~SGaG~~~~~~~~-~~-----~~~~ni~py~~~~----h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~ 261 (359)
T 1xyg_A 192 SGVSGAGRGAKEANL-YS-----EIAEGISSYGVTR----HRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYV 261 (359)
T ss_dssp EEGGGGCSCCCGGGB-HH-----HHTTCCEECSCSC----CTHHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEE
T ss_pred EEccccCcccchhhh-hH-----HHhcCeecccccc----cccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEE
Confidence 99999996 566543 22 3578999999884 44555554 3 899999999999999999999
Q ss_pred EecCCCCHHHHHHHHHHhccC-cccccccccCcceEeeccCCCCceeEEeCCCceeecCCeEEEEEEeCCC-chhHhhHH
Q 021899 218 RLEKEATYEEIKNAIKEESEG-KLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVI 295 (306)
Q Consensus 218 ~~~~~~~~e~i~~~l~~a~~~-~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~~~~~~~~k~~~WyDnE-~gy~~r~~ 295 (306)
+++++++.|||+++|+++.++ |+--++...+-|-. .+..|..+-.|- .... ..++.+.++++.||- +|.|-+-+
T Consensus 262 ~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~-~~v~g~n~~~ig-~~~d--~~~~~l~~~~~~DNl~kGAAg~Av 337 (359)
T 1xyg_A 262 EMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRT-HNVRGSNYCHMS-VFPD--RIPGRAIIISVIDNLVKGASGQAL 337 (359)
T ss_dssp EBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBG-GGTTTSSCEEEE-EEEC--SSTTEEEEEEEECTTTTTTHHHHH
T ss_pred EeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCH-HHhcCCCeEEEE-EEEe--CCCCEEEEEEEehhhhHhHHHHHH
Confidence 999999999999999997764 33333322112221 144454433332 1110 123578999999999 89999999
Q ss_pred HHHHHHhhh
Q 021899 296 DLIVHMAKT 304 (306)
Q Consensus 296 d~~~~~~~~ 304 (306)
-.++.|-..
T Consensus 338 q~~nl~~g~ 346 (359)
T 1xyg_A 338 QNLNIMLGY 346 (359)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHhCC
Confidence 888888653
No 37
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=1.9e-32 Score=262.87 Aligned_cols=231 Identities=19% Similarity=0.209 Sum_probs=174.8
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCccccCC--C--------CCEEEcCChhh
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP--E--------LDIVSNASCTT 124 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~~~~~~--~--------~~IVsn~sCtT 124 (306)
.++|+||+|+|.+.+++.++.|+++|+ .|||++++ |+|++|||||++.++. . .+|||||||+|
T Consensus 78 ~~vDvvf~a~p~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIanPgC~t 155 (359)
T 4dpk_A 78 DDVDIIFSPLPQGAAGPVEEQFAKEGF--PVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTA 155 (359)
T ss_dssp TTCCEEEECCCTTTHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEECCCHHH
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCC--EEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEECCCcHH
Confidence 389999999999999999999999999 56666654 5899999999999853 1 25999999999
Q ss_pred hhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCccccccccccccccccCCCCh-hH---HHHhhhcccCC----
Q 021899 125 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AK---AVGKVLPALNG---- 196 (306)
Q Consensus 125 ~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~-ak---~~~kvlpel~g---- 196 (306)
+|++++|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++|++|+++|. .| |+.+++++++|
T Consensus 156 t~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~l~g~~~~ 227 (359)
T 4dpk_A 156 QGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDE 227 (359)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHHTSCCSCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999965 222 246899999999875 33 57788888765
Q ss_pred ------ceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCc-ccccccccCcceEee-----------ccCC
Q 021899 197 ------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGK-LKGILGYTEEDVVST-----------DFVG 258 (306)
Q Consensus 197 ------ki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~-lkgil~~~e~~~VS~-----------d~~~ 258 (306)
+++++|+|||+++||+++++++++++++.|||+++|+++.+.| -.++.... +|+|-. +-..
T Consensus 228 ~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p-~~fV~v~~~~~~P~~~~~~g~ 306 (359)
T 4dpk_A 228 PKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAP-SKPIIVMNEDTRPQVYFDRWA 306 (359)
T ss_dssp SCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCC-SCSEEECCSTTCCCHHHHTTC
T ss_pred ccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCC-CccEEEcCCCCCCCHHHhhcc
Confidence 7999999999999999999999999999999999999987652 11121111 121111 1100
Q ss_pred CC---ceeEEeCCCceeecCCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 259 DS---RSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 259 ~~---~s~i~d~~~~~~~~~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
+. ..+ +-+... ..+++.+.+++=-||= +|=|-.-+-.++.|.+
T Consensus 307 ~~~~~~~~-~Vgr~r-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~ 353 (359)
T 4dpk_A 307 GDIPGMSV-VVGRLK-QVNKRMIRLVSLIHNTVRGAAGGGILAAELLVE 353 (359)
T ss_dssp TTTTTCSE-EEEEEE-EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CCCcCCeE-EEEEEE-EcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHH
Confidence 10 111 110000 0235667888889994 6766666666666654
No 38
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=1.9e-32 Score=262.87 Aligned_cols=231 Identities=19% Similarity=0.209 Sum_probs=174.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCccccCC--C--------CCEEEcCChhh
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP--E--------LDIVSNASCTT 124 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~~~~~~--~--------~~IVsn~sCtT 124 (306)
.++|+||+|+|.+.+++.++.|+++|+ .|||++++ |+|++|||||++.++. . .+|||||||+|
T Consensus 78 ~~vDvvf~a~p~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIanPgC~t 155 (359)
T 4dpl_A 78 DDVDIIFSPLPQGAAGPVEEQFAKEGF--PVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTA 155 (359)
T ss_dssp TTCCEEEECCCTTTHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEECCCHHH
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCC--EEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEECCCcHH
Confidence 389999999999999999999999999 56666654 5899999999999853 1 25999999999
Q ss_pred hhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCccccccccccccccccCCCCh-hH---HHHhhhcccCC----
Q 021899 125 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AK---AVGKVLPALNG---- 196 (306)
Q Consensus 125 ~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~-ak---~~~kvlpel~g---- 196 (306)
+|++++|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++|++|+++|. .| |+.+++++++|
T Consensus 156 t~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~l~g~~~~ 227 (359)
T 4dpl_A 156 QGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDE 227 (359)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHTTSCCSSCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999975 222 246899999999875 33 57788888765
Q ss_pred ------ceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCc-ccccccccCcceEee-----------ccCC
Q 021899 197 ------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGK-LKGILGYTEEDVVST-----------DFVG 258 (306)
Q Consensus 197 ------ki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~-lkgil~~~e~~~VS~-----------d~~~ 258 (306)
+++++|+|||+++||+++++++++++++.|||+++|+++.+.| -.++.... +|+|-. +-..
T Consensus 228 ~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p-~~fV~v~~~~~~P~~~~~~g~ 306 (359)
T 4dpl_A 228 PKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAP-SKPIIVMNEDTRPQVYFDRWA 306 (359)
T ss_dssp SCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCC-SCSEEEECSTTCCCHHHHTTC
T ss_pred ccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCC-CccEEEcCCCCCCCHHHhhcc
Confidence 7999999999999999999999999999999999999987652 11122111 121111 1100
Q ss_pred CC---ceeEEeCCCceeecCCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 259 DS---RSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 259 ~~---~s~i~d~~~~~~~~~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
+. ..+ +-+... ..+++.+.+++=-||= +|=|-.-+-.++.|.+
T Consensus 307 ~~~~~~~~-~Vgr~r-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~ 353 (359)
T 4dpl_A 307 GDIPGMSV-VVGRLK-QVNKRMIRLVSLIHNTVRGAAGGGILAAELLVE 353 (359)
T ss_dssp TTTTTCSE-EEEEEE-EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CCCcCCeE-EEEEEE-EcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHH
Confidence 10 111 111000 0235667888889994 6766666666666654
No 39
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.98 E-value=1.6e-32 Score=262.09 Aligned_cols=224 Identities=10% Similarity=0.001 Sum_probs=171.1
Q ss_pred CccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC---C--------------------CCeEEcccCccccCCC
Q 021899 57 WAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---D--------------------APMFVVGVNEKEYKPE 113 (306)
Q Consensus 57 w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~---d--------------------~p~vV~gVN~~~~~~~ 113 (306)
| .++|+||+|+|.+.+++.++.|+++|+ .|||++++ + .|+.|||+|++.++.
T Consensus 66 ~--~~vDvV~~a~g~~~s~~~a~~~~~aG~--~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~i~~- 140 (345)
T 2ozp_A 66 L--EPADILVLALPHGVFAREFDRYSALAP--VLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREALKG- 140 (345)
T ss_dssp C--CCCSEEEECCCTTHHHHTHHHHHTTCS--EEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHHHHT-
T ss_pred h--cCCCEEEEcCCcHHHHHHHHHHHHCCC--EEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHHhhc-
Confidence 7 389999999999999999999999999 57888774 1 345556669999985
Q ss_pred CCEEEcCChhhhhhhhhhHHHhhhcCee--EEEEeeeeccCCcc-ccccCCCccccccccccccccccCCCChhHHHHhh
Q 021899 114 LDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQ-KTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKV 190 (306)
Q Consensus 114 ~~IVsn~sCtT~~Lap~lk~L~~~fgI~--~~~~tT~ha~t~~q-~~~D~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kv 190 (306)
.++||||||+|+|++|+|+||+++|+|+ ++.|+|+|++||+| +.+|+++ .+ .+..|++|+.+|. .++
T Consensus 141 ~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~n~~py~~~~----h~~ 210 (345)
T 2ozp_A 141 ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HP-----ERAGSIRVYKPTG----HRH 210 (345)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HH-----HHTTCCEEEECSC----CTH
T ss_pred CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-ch-----hhccccccCCCCC----ccC
Confidence 6899999999999999999999999999 99999999999999 4567654 22 3578999999884 567
Q ss_pred hcccC-----C-ceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccCcccccccccC-------cceEeeccC
Q 021899 191 LPALN-----G-KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTE-------EDVVSTDFV 257 (306)
Q Consensus 191 lpel~-----g-ki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~~lkgil~~~e-------~~~VS~d~~ 257 (306)
+||++ + +++++|+|||+++||+.+++++++++++.|||+++|+++.++. .+| .+.+ -|-.- +..
T Consensus 211 ~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~y~~~-~~v-~v~~~~~~~~~~p~~~-~~~ 287 (345)
T 2ozp_A 211 TAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGE-PFI-RLVKQKKGVHRYPDPR-FVQ 287 (345)
T ss_dssp HHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTC-TTE-EECCCSSSSCCSCCHH-HHT
T ss_pred hHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHHHHhCCC-CCE-EEEeCCCCcCCCCCHH-Hhc
Confidence 77776 5 8999999999999999999999999999999999999977642 222 2221 11111 223
Q ss_pred CCCceeEEeCCCceeec--CCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 258 GDSRSSIFDAKAGIALS--KNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 258 ~~~~s~i~d~~~~~~~~--~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
|..+-.| + +..+ ++.+.+++=-||= +|=|-+-+-.++.|-.
T Consensus 288 g~~~~~i---g--~~~d~~~~~~~~~~~~DNl~kGAAg~Avq~~nl~~g 331 (345)
T 2ozp_A 288 GTNYADI---G--FELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMG 331 (345)
T ss_dssp TSCCEEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred CCceEEE---E--EEEeCCCCEEEEEEEeccHHHHHHHHHHHHHHHHhC
Confidence 3222222 1 1121 3556777778994 5777777767776654
No 40
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.98 E-value=2.7e-32 Score=261.11 Aligned_cols=175 Identities=23% Similarity=0.318 Sum_probs=151.5
Q ss_pred CCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCccccCC----------CCC
Q 021899 51 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKP----------ELD 115 (306)
Q Consensus 51 ~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~~~~~~----------~~~ 115 (306)
++++ |.+.++|+||+|+|.+.+++.++.|+++|+ .|||+|++ +.|++|||+|++.|+. ..+
T Consensus 75 ~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~ 150 (354)
T 1ys4_A 75 DPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGK--LIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDGA 150 (354)
T ss_dssp CTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSSE
T ss_pred CHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCC--EEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccCCe
Confidence 4544 743589999999999999999999999999 59999986 4799999999998873 235
Q ss_pred EEEcCChhhhhhhhhhHHHhhhcCeeEEEEeeeeccCCccccccCCCccccccccccccccccCCCCh-h---HHHHhhh
Q 021899 116 IVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-A---KAVGKVL 191 (306)
Q Consensus 116 IVsn~sCtT~~Lap~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~-a---k~~~kvl 191 (306)
+|+||||+|+|++|+|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++|++|+++|. . .|+.+++
T Consensus 151 iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~~~k~~~Ei~~~l 222 (354)
T 1ys4_A 151 IITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP------SMAILDNLIPFIKNEEEKMQTESLKLL 222 (354)
T ss_dssp EEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC------HHHHTTCCBSCCTTHHHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc------chHHhCCEEeccCchhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999976 222 346899999999884 2 3444556
Q ss_pred cccCC--------ceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhcc
Q 021899 192 PALNG--------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE 237 (306)
Q Consensus 192 pel~g--------ki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~ 237 (306)
+++.| +++++++|||+++||+++++++++++++.|||+++|+++.+
T Consensus 223 ~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~~~ 276 (354)
T 1ys4_A 223 GTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDP 276 (354)
T ss_dssp SEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHCCT
T ss_pred hccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhc
Confidence 66544 79999999999999999999999999999999999999885
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.97 E-value=7.1e-31 Score=253.62 Aligned_cols=170 Identities=23% Similarity=0.309 Sum_probs=145.5
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC-----CCCeEEcccCccccC---------------CCCCEEEc
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYK---------------PELDIVSN 119 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~-----d~p~vV~gVN~~~~~---------------~~~~IVsn 119 (306)
.++|+||+|+|.+.+++.++.++++|+ .|||++++ |+|++|++||++.|. ...+||+|
T Consensus 92 ~~~Dvvf~alp~~~s~~~~~~~~~~G~--~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~~~i~~~~iIaN 169 (381)
T 3hsk_A 92 LECDVVFSGLDADVAGDIEKSFVEAGL--AVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSKGGKKPGFIICI 169 (381)
T ss_dssp GGCSEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHTTCCCCCEEEEE
T ss_pred ccCCEEEECCChhHHHHHHHHHHhCCC--EEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcccccccCCcEEEC
Confidence 389999999999999999999999999 78898875 479999999999885 24569999
Q ss_pred CChhhhhhhhhhHHHhhhcC-eeEEEEeeeeccCCccccccCCCccccccccccccccccCCCCh-h---HHHHhhhccc
Q 021899 120 ASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-A---KAVGKVLPAL 194 (306)
Q Consensus 120 ~sCtT~~Lap~lk~L~~~fg-I~~~~~tT~ha~t~~q~~~D~~~~~d~r~~r~~a~NiiP~~tG~-a---k~~~kvlpel 194 (306)
|+|+|+|++++|+||+++|| |+++.|+|+|++||+|+... . + .+.+++|++|+++|. . .|+.|+++.+
T Consensus 170 PgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~-~---~---~~~~~~N~~Py~~~~e~k~~~Ei~kiL~~l 242 (381)
T 3hsk_A 170 SNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPG-V---S---GMDILDNIVPYISGEEDKLEWETKKILGGV 242 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC-------C---C---HHHHTTCCBCCCTTHHHHHHHHHHHHTCEE
T ss_pred CCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCC-c---c---hhhhhcChhhcccchHHHHHHHHHHHhhhc
Confidence 99999999999999999999 99999999999999996311 1 1 246899999999875 2 4466777766
Q ss_pred CC-------------ceEEEEEeeccCcceEEEEEEEecC--CCCHHHHHHHHHHhccC
Q 021899 195 NG-------------KLTGMSFRVPTVDVSVVDLTVRLEK--EATYEEIKNAIKEESEG 238 (306)
Q Consensus 195 ~g-------------ki~~~avRVPv~~gs~~dltv~~~~--~~~~e~i~~~l~~a~~~ 238 (306)
.+ +++++|+|||+++||+.++++++++ +++.|||+++|+++.++
T Consensus 243 ~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~~~y~~ 301 (381)
T 3hsk_A 243 NAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECA 301 (381)
T ss_dssp CTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHHHCBCH
T ss_pred ccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHHHhhcc
Confidence 55 8999999999999999999999999 99999999999998754
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.97 E-value=3.1e-30 Score=245.58 Aligned_cols=222 Identities=14% Similarity=0.117 Sum_probs=173.4
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC----C--CC------------------eEEcccCccccCCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK----D--AP------------------MFVVGVNEKEYKPELD 115 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~----d--~p------------------~vV~gVN~~~~~~~~~ 115 (306)
.++|+||+|+|.+.+++.++.|+++|+ .|||++++ | +| ..+||+|++.++. .+
T Consensus 74 ~~~Dvvf~a~p~~~s~~~~~~~~~~g~--~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~~i~~-~~ 150 (337)
T 3dr3_A 74 PGVDVVFLATAHEVSHDLAPQFLEAGC--VVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKE-AN 150 (337)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCHHHHT-CS
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCC--EEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHHHhCC-CC
Confidence 389999999999999999999999999 67887765 2 22 2577779999974 78
Q ss_pred EEEcCChhhhhhhhhhHHHhh--hcCeeEE-EEeeeeccCCcc-ccccCCCccccccccccccccccCCCChhHHHHhhh
Q 021899 116 IVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQ-KTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 191 (306)
Q Consensus 116 IVsn~sCtT~~Lap~lk~L~~--~fgI~~~-~~tT~ha~t~~q-~~~D~~~~~d~r~~r~~a~NiiP~~tG~ak~~~kvl 191 (306)
|||||||+|+|++++|+||++ .|+++++ .|+|+|++||+| +.+|+.+ .+.| |++|+..+. .+.+
T Consensus 151 iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~py~~~~----h~h~ 218 (337)
T 3dr3_A 151 LIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQPYGVFT----HRHQ 218 (337)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEECSTTT----CTHH
T ss_pred EEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEccCccc----ceec
Confidence 999999999999999999998 6999999 999999999998 5666443 3332 999998775 4577
Q ss_pred cccCC----ceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHh-ccCcccccccccCcceEeeccCCCCceeEEe
Q 021899 192 PALNG----KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEE-SEGKLKGILGYTEEDVVSTDFVGDSRSSIFD 266 (306)
Q Consensus 192 pel~g----ki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a-~~~~lkgil~~~e~~~VS~d~~~~~~s~i~d 266 (306)
||+++ +++++++|||+++||+.+++++++++++.|||+++|+++ ++.|+--++.-.+ |.. .+..|..+-.|-
T Consensus 219 Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~v~gtn~~~ig- 295 (337)
T 3dr3_A 219 PEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KNVVGLPFCDIG- 295 (337)
T ss_dssp HHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GGTTTSSCEEEE-
T ss_pred hhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HHhCCCCcEEEE-
Confidence 88776 899999999999999999999999999999999999986 3334433332111 321 244444433221
Q ss_pred CCCceeecCCeEEEEEEeCC-CchhHhhHHHHHHHHhh
Q 021899 267 AKAGIALSKNFVKLVSWYDN-EWGYSSRVIDLIVHMAK 303 (306)
Q Consensus 267 ~~~~~~~~~~~~k~~~WyDn-E~gy~~r~~d~~~~~~~ 303 (306)
...+++.+.+++..|| -+|=|-+-+-.|+.|-.
T Consensus 296 ----~~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nlm~g 329 (337)
T 3dr3_A 296 ----FAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFG 329 (337)
T ss_dssp ----EEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHT
T ss_pred ----EEEeCCEEEEEEEechHHHHHHHHHHHHHHHHhC
Confidence 1222567888888999 67888888888887754
No 43
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.95 E-value=1e-26 Score=222.61 Aligned_cols=227 Identities=11% Similarity=0.062 Sum_probs=167.2
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC----C-C--------------CeEEccc--CccccCCCCCEEEc
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK----D-A--------------PMFVVGV--NEKEYKPELDIVSN 119 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~----d-~--------------p~vV~gV--N~~~~~~~~~IVsn 119 (306)
++|+||+|+|.+.+++.++.+ ++|+ .+||.+++ | . |..|||+ |++.++ ..++|+|
T Consensus 80 ~~DvVf~alg~~~s~~~~~~~-~~G~--~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~~~i~-~~~iIan 155 (352)
T 2nqt_A 80 GHDAVFLALPHGHSAVLAQQL-SPET--LIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGARDQLR-GTRRIAV 155 (352)
T ss_dssp TCSEEEECCTTSCCHHHHHHS-CTTS--EEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHHHHHT-TCSEEEC
T ss_pred CCCEEEECCCCcchHHHHHHH-hCCC--EEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCHHHHh-cCCEEEc
Confidence 899999999999999999999 9998 56666654 2 2 8889999 999998 4689999
Q ss_pred CChhhhhhhhhhHHHhhhcCee-EEEEeeeeccCCcc-ccccCCCcccccccccccccccc-CCCChh----HHHHhhhc
Q 021899 120 ASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITATQ-KTVDGPSMKDWRGGRAASFNIIP-SSTGAA----KAVGKVLP 192 (306)
Q Consensus 120 ~sCtT~~Lap~lk~L~~~fgI~-~~~~tT~ha~t~~q-~~~D~~~~~d~r~~r~~a~NiiP-~~tG~a----k~~~kvlp 192 (306)
|+|+|+|++++|+||+++++|+ ++.|+|+|++||+| +.+++.+ .+.++++..++|++| +. +. .+..|++.
T Consensus 156 PgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~~h~--h~pEi~~e~~ki~~ 232 (352)
T 2nqt_A 156 PGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAGVHR--HTPEIAQGLRAVTD 232 (352)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTTTST--THHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCCcce--ecHHHHHHHHHHhC
Confidence 9999999999999999999999 99999999999997 6666444 466777778999988 43 22 22234443
Q ss_pred ccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccC-cccccccccCcceEeeccCCCCceeEEeCCCce
Q 021899 193 ALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEG-KLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGI 271 (306)
Q Consensus 193 el~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~-~lkgil~~~e~~~VS~d~~~~~~s~i~d~~~~~ 271 (306)
.+.+++++|+|||+++||+.+++++++++ .|||+++|+++-++ |+--++.-.+-|- ..+..|..+-.| + .
T Consensus 233 -~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~~~y~~~~~V~v~~~~~~p~-~~~v~g~n~~~i---g--~ 303 (352)
T 2nqt_A 233 -RDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPR-TGAVIGSNAAHI---A--V 303 (352)
T ss_dssp -SCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHHHHHTTCTTEEECCTTCCCC-GGGTTTSSCEEE---E--E
T ss_pred -CCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHHHhhCCCCCEEEeCCCCCcC-hHHhcCCcEEEE---E--E
Confidence 25689999999999999999999999988 99999999986332 3222221111111 113344333222 1 1
Q ss_pred ee--cCCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 272 AL--SKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 272 ~~--~~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
.. .++.+.+++=-||= +|=|-+-+-.++.|-.
T Consensus 304 ~~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~nl~~g 338 (352)
T 2nqt_A 304 AVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALG 338 (352)
T ss_dssp EEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHHT
T ss_pred EEeCCCCEEEEEEEEcchhHhHHHHHHHHHHHHhC
Confidence 12 23456777778994 5766666666666643
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.90 E-value=1.7e-23 Score=199.98 Aligned_cols=224 Identities=14% Similarity=0.099 Sum_probs=159.5
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC---CC--------------------CeEEcccCccccCCCCCE
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DA--------------------PMFVVGVNEKEYKPELDI 116 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~---d~--------------------p~vV~gVN~~~~~~~~~I 116 (306)
.++|+||+|+|...+++.++.+ +|+ +|||++++ +. |..+||+|.+.+.. .++
T Consensus 77 ~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e~i~~-a~i 151 (351)
T 1vkn_A 77 KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHREEIKN-AQV 151 (351)
T ss_dssp HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHHHHTT-CSE
T ss_pred cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHHHhcc-CCE
Confidence 3799999999999999999988 899 89999986 32 78899999999975 589
Q ss_pred EEcCChhhhhhhhhhHHHhhhcCee--EEEEeeeeccCCccc-cccCCCccccccccccccccccCCCChh-------HH
Q 021899 117 VSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQK-TVDGPSMKDWRGGRAASFNIIPSSTGAA-------KA 186 (306)
Q Consensus 117 Vsn~sCtT~~Lap~lk~L~~~fgI~--~~~~tT~ha~t~~q~-~~D~~~~~d~r~~r~~a~NiiP~~tG~a-------k~ 186 (306)
|+||+|+|++++++|+||+++++|+ ++.++|+|++||+|+ .+++.+ ...+..|+.|...+.- ++
T Consensus 152 IANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~------~~e~~~n~~~y~~~~h~h~pEi~~e 225 (351)
T 1vkn_A 152 VGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYL------FSEVNESLRPYNVAKHRHVPEMEQE 225 (351)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGB------HHHHTTCCEECSCSCCTHHHHHHHH
T ss_pred EeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccc------hhHHhcccccCCccccccHHHHHHH
Confidence 9999999999999999999999999 999999999999995 444332 1134567777765422 22
Q ss_pred HHhhhcccCCceEEEEEeeccCcceEEEEEEEecCCCCHHHHHHHHHHhccC-cccccccccCcceEeeccCCCCceeEE
Q 021899 187 VGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEG-KLKGILGYTEEDVVSTDFVGDSRSSIF 265 (306)
Q Consensus 187 ~~kvlpel~gki~~~avRVPv~~gs~~dltv~~~~~~~~e~i~~~l~~a~~~-~lkgil~~~e~~~VS~d~~~~~~s~i~ 265 (306)
.+|++.+ ..+++.+|+|||+++||+..++++++ ++.++++++|+++-++ |+--++.-.+-|-.- +..|..+-.|
T Consensus 226 l~~i~~~-~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~~~Y~~~pfV~v~~~~~~P~~~-~v~gtn~~~I- 300 (351)
T 1vkn_A 226 LGKISGK-KVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYLEFYKNEPFVHVLPMGIYPSTK-WCYGSNHVFI- 300 (351)
T ss_dssp HHHHHTS-CCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHHHHHTTCTTEEECCTTCCCCGG-GGTTSSCEEE-
T ss_pred HHHhhCC-CCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHHHhhCCCCCEEEeCCCCCcChH-HhcCCceEEE-
Confidence 2333321 24799999999999999999999998 8999999999975432 222222111112111 2233322222
Q ss_pred eCCCceeec--CCeEEEEEEeCCC-chhHhhHHHHHHHHhh
Q 021899 266 DAKAGIALS--KNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 303 (306)
Q Consensus 266 d~~~~~~~~--~~~~k~~~WyDnE-~gy~~r~~d~~~~~~~ 303 (306)
+ ...+ .+.+.+++=-||= +|=|-+-+-.|+.|-.
T Consensus 301 --g--~~~d~~~~~l~~~s~~DNL~KGAAgqAVQn~nlm~G 337 (351)
T 1vkn_A 301 --G--MQMEERTNTLILMSAIDNLVKGASGQAVQNMNIMFG 337 (351)
T ss_dssp --E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred --E--EEEcCCCCEEEEEEEcccHHHhHHHHHHHHHHHHhC
Confidence 1 1122 2445555558994 5666666666666643
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.40 E-value=0.00014 Score=67.94 Aligned_cols=159 Identities=15% Similarity=0.199 Sum_probs=100.3
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhC--CCCeEEeeCCCC-CCCeEEcccCccccCC--CCCEEEcCChhhhhhhhhhHHH
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKG--GAKKVVISAPSK-DAPMFVVGVNEKEYKP--ELDIVSNASCTTNCLAPLAKVI 134 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~a--GakkvvIsaps~-d~p~vV~gVN~~~~~~--~~~IVsn~sCtT~~Lap~lk~L 134 (306)
.++|+||+|||.....+.+..++++ |. .|++..+. -.|..++++|.+.+.. ...+++++.|.+ .|++..+
T Consensus 70 ~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~~~---ipl~~a~ 144 (312)
T 1nvm_B 70 ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQAT---IPMVAAV 144 (312)
T ss_dssp GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHHHH---HHHHHHH
T ss_pred CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEeCCccc---chHHHHh
Confidence 3799999999999999999999999 98 66665443 3578888999888642 235777777754 5666667
Q ss_pred hhhcCeeEE-EEeeeeccCC-cc-c-cccCCC------------------------ccccccccccccccccCCC--Chh
Q 021899 135 HDKFGIVEG-LMTTVHSITA-TQ-K-TVDGPS------------------------MKDWRGGRAASFNIIPSST--GAA 184 (306)
Q Consensus 135 ~~~fgI~~~-~~tT~ha~t~-~q-~-~~D~~~------------------------~~d~r~~r~~a~NiiP~~t--G~a 184 (306)
.+.+..... .+.++++.+. .+ + .+|+.. +..--.-|+.++|.+|..+ +..
T Consensus 145 ~~~~~~~~~~iv~~i~sgs~G~~~~~~l~e~~~~~~~ai~~~gg~~~~k~il~~~p~~~p~~~~~tv~~~~~~~~~~~~~ 224 (312)
T 1nvm_B 145 SRVAKVHYAEIVASISSKSAGPGTRANIDEFTETTSKAIEVIGGAAKGKAIIIMNPAEPPLIMRDTVYVLSAAADQAAVA 224 (312)
T ss_dssp HTTSCEEEEEEEEEEEGGGSCHHHHTCHHHHHHHHHHHHHHTTCCSSEEEEEEEECCSSCCCEEEEEEEEESSCCHHHHH
T ss_pred hhhccchhHhHhhhhhccccCCCcccchhhHHHHHHHHHHHhhhccCCCcEEEEecCCCCcccceeEEEEeCCCCHHHHH
Confidence 777765433 5677776662 21 1 111111 0000113567888887333 556
Q ss_pred HHHHhhhcccCC-------ceEE--------EEEeeccC---cceEEEEEEEecCCC
Q 021899 185 KAVGKVLPALNG-------KLTG--------MSFRVPTV---DVSVVDLTVRLEKEA 223 (306)
Q Consensus 185 k~~~kvlpel~g-------ki~~--------~avRVPv~---~gs~~dltv~~~~~~ 223 (306)
+++.++++|++. +..- ..+++|-+ .+..+.+.++.+-.-
T Consensus 225 ~~~~~m~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (312)
T 1nvm_B 225 ASVAEMVQAVQAYVPGYRLKQQVQFDVIPESAPLNIPGLGRFSGLKTSVFLEVEGAA 281 (312)
T ss_dssp HHHHHHHHHHHTTCTTEEESSCCEEEEECTTSCEEETTTEEECEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCcCCCceEEeccCCCcccccCccccCCCEEEEEEEEecCc
Confidence 777777777653 2111 12456655 378888888887643
No 46
>2jv8_A Uncharacterized protein NE1242; solution structure, NESG, structural genomics, unknown function, PSI-2; NMR {Nitrosomonas europaea atcc 19718}
Probab=69.47 E-value=2.5 Score=29.46 Aligned_cols=34 Identities=12% Similarity=0.412 Sum_probs=26.1
Q ss_pred CCCccEEEeCceeEEECCEeEEEEeccCCCCCCCcc
Q 021899 24 WKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAK 59 (306)
Q Consensus 24 ~~~~~v~~~~g~~l~~~g~~i~v~~~~~~~~~~w~~ 59 (306)
|..++|.++++..|.||||+|...+ |.-+-.|+.
T Consensus 8 feggtidieddtsltingkeisyvh--davknkwss 41 (73)
T 2jv8_A 8 FEGGTIDIEDDTSLTINGKEISYVH--DAVKNKWSS 41 (73)
T ss_dssp ETTEEEEEETTEEEEETTEECCCCC--CSSSCCCCC
T ss_pred ecCCeeeeccCceeEECCEEeehHH--HHHhccccc
Confidence 4557899999989999999987764 555556763
No 47
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.87 E-value=4.4 Score=30.04 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=27.6
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEee
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 92 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIs 92 (306)
.++|+||.|+|.......+..++++|++++.++
T Consensus 68 ~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 68 GGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred cCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 378999999998888888889999999665543
No 48
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=41.92 E-value=17 Score=33.40 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=26.4
Q ss_pred CCccEEEEecCCC----CCHHHHHHHHhCCCCeEEeeC
Q 021899 60 TGAEYVVESTGVF----TDKDKAAAHLKGGAKKVVISA 93 (306)
Q Consensus 60 ~gvdiV~e~tG~~----~s~e~a~~h~~aGakkvvIsa 93 (306)
..+|+|++|||.. ...+.+..++++|. -|+++
T Consensus 85 ~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk--hVvta 120 (331)
T 3c8m_A 85 RDFDIVVDATPASADGKKELAFYKETFENGK--DVVTA 120 (331)
T ss_dssp SSCSEEEECSCCCSSSHHHHHHHHHHHHTTC--EEEEC
T ss_pred CCCCEEEECCCCCCccchHHHHHHHHHHCCC--eEEec
Confidence 4799999999986 56678899999998 66664
No 49
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=39.83 E-value=15 Score=31.50 Aligned_cols=85 Identities=19% Similarity=0.111 Sum_probs=48.5
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCC-CC-CCCeEEcccCccccC-CCCCEEEcCChhhhhhhhhhHHHhh
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP-SK-DAPMFVVGVNEKEYK-PELDIVSNASCTTNCLAPLAKVIHD 136 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsap-s~-d~p~vV~gVN~~~~~-~~~~IVsn~sCtT~~Lap~lk~L~~ 136 (306)
.++|+|++|++.....+.+..++++|. .||+.. .. +.+-...++-. ... ....++-.+++... ...++....
T Consensus 49 ~~~DvVv~~~~~~~~~~~~~~~l~~G~--~vv~~~~~~~~~~~~~~~l~~-~a~~~g~~~~i~~~~~g~--~~~~~~~~~ 123 (236)
T 2dc1_A 49 REMDVAVEAASQQAVKDYAEKILKAGI--DLIVLSTGAFADRDFLSRVRE-VCRKTGRRVYIASGAIGG--LDAIFSASE 123 (236)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHTTC--EEEESCGGGGGSHHHHHHHHH-HHHHHCCCEEECCTTCSC--HHHHHHTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCC--cEEEECcccCChHHHHHHHHH-HHHhcCCeEEecCccccC--hHHHHHhhc
Confidence 479999999999988899999999998 555543 22 11100011100 011 12333333333322 233444333
Q ss_pred hcCeeEEEEeeeecc
Q 021899 137 KFGIVEGLMTTVHSI 151 (306)
Q Consensus 137 ~fgI~~~~~tT~ha~ 151 (306)
|++++.+++.+..
T Consensus 124 --~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 124 --LIEEIVLTTRKNW 136 (236)
T ss_dssp --GEEEEEEEEEEEG
T ss_pred --cccEEEEEEEcCh
Confidence 8999999988865
No 50
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=39.27 E-value=27 Score=31.45 Aligned_cols=34 Identities=9% Similarity=0.086 Sum_probs=28.5
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
++|+|+.||+.....+.+..++++|. .|++.-|.
T Consensus 71 ~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKp~ 104 (346)
T 3cea_A 71 NIDAIFIVAPTPFHPEMTIYAMNAGL-NVFCEKPL 104 (346)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCC
T ss_pred CCCEEEEeCChHhHHHHHHHHHHCCC-EEEEcCCC
Confidence 79999999999999999999999994 46665454
No 51
>2v1y_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit alpha isoform; cancer, SH2 domain, SH3 domain, transferase, oncogen mutations, HOST-virus interaction; 2.4A {Bos taurus}
Probab=39.07 E-value=51 Score=25.61 Aligned_cols=46 Identities=22% Similarity=0.200 Sum_probs=32.9
Q ss_pred cCcceEEEEEEEecCCCCHHHHHH-HHHHhccCcccccccccCcceEee
Q 021899 207 TVDVSVVDLTVRLEKEATYEEIKN-AIKEESEGKLKGILGYTEEDVVST 254 (306)
Q Consensus 207 v~~gs~~dltv~~~~~~~~e~i~~-~l~~a~~~~lkgil~~~e~~~VS~ 254 (306)
.++|-. ++++..+..+..+|++ +|++|..-||-+.|+=.++-+.++
T Consensus 26 lPnGi~--i~l~~~~~~tl~eiK~~lw~eA~~~PL~~~L~d~~~Y~F~~ 72 (108)
T 2v1y_A 26 LPNGMI--VTLECLREATLITIKHELFKEARKYPLHQLLQDESSYIFVS 72 (108)
T ss_dssp CTTSCE--EEEEEETTCBHHHHHHHHHHHGGGSTTGGGCCCGGGCEEEE
T ss_pred cCcEEE--EEEEeeccccHHHHHHHHHHHHHhCchHHHhCCccceEEEE
Confidence 367754 4555677899999988 888888889888876555544433
No 52
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=38.99 E-value=30 Score=31.61 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=31.1
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|-+
T Consensus 64 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPla 99 (358)
T 3gdo_A 64 PAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKPMT 99 (358)
T ss_dssp TTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESSCC
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecCCc
Confidence 47999999999999999999999999 4587877743
No 53
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=36.83 E-value=31 Score=31.39 Aligned_cols=35 Identities=29% Similarity=0.282 Sum_probs=30.5
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|-
T Consensus 66 ~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKPl 100 (352)
T 3kux_A 66 PSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKPF 100 (352)
T ss_dssp SSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSSC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECCC
Confidence 46999999999999999999999999 458887774
No 54
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=36.78 E-value=20 Score=32.07 Aligned_cols=91 Identities=16% Similarity=0.095 Sum_probs=50.4
Q ss_pred CCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC--CCCeEEcccCccccCCCCCE-E-EcCChhhhh
Q 021899 51 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK--DAPMFVVGVNEKEYKPELDI-V-SNASCTTNC 126 (306)
Q Consensus 51 ~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~--d~p~vV~gVN~~~~~~~~~I-V-sn~sCtT~~ 126 (306)
|.+.+-. +.|+|+||++...-++...+.+++|+. ||+....+ | |-+.-.+....-....++ + |.+..---+
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S~gaLad-~~l~~~L~~aA~~gg~~l~vpSGAi~GlD~ 127 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVN-YIIISTSAFAD-EVFRERFFSELKNSPARVFFPSGAIGGLDV 127 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECCGGGGGS-HHHHHHHHHHHHTCSCEEECCCTTCCCHHH
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcChhhhcC-HHHHHHHHHHHHHCCCeEEecCCcccchhH
Confidence 5666652 789999999998777889999999994 33333322 2 100000000000111232 1 333322222
Q ss_pred hhhhhHHHhhhcCeeEEEEeeeeccC
Q 021899 127 LAPLAKVIHDKFGIVEGLMTTVHSIT 152 (306)
Q Consensus 127 Lap~lk~L~~~fgI~~~~~tT~ha~t 152 (306)
|+... -+|+++.++|.-+-.
T Consensus 128 ----l~aa~--g~l~~V~~~t~K~P~ 147 (253)
T 1j5p_A 128 ----LSSIK--DFVKNVRIETIKPPK 147 (253)
T ss_dssp ----HHHHG--GGEEEEEEEEEECGG
T ss_pred ----HHHhc--CCccEEEEEEeCChH
Confidence 33333 789999999987664
No 55
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=36.76 E-value=22 Score=32.23 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=29.1
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
.++|+|++||+.....+.+..++++|. .||++.|.
T Consensus 57 ~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 57 DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 379999999999988899999999986 46666654
No 56
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=34.89 E-value=28 Score=32.16 Aligned_cols=31 Identities=29% Similarity=0.343 Sum_probs=25.0
Q ss_pred CccEEEEecCCC-CCHHHHHHHHhCCCCeEEeeC
Q 021899 61 GAEYVVESTGVF-TDKDKAAAHLKGGAKKVVISA 93 (306)
Q Consensus 61 gvdiV~e~tG~~-~s~e~a~~h~~aGakkvvIsa 93 (306)
.+|+|++|||.. ...+.+.+++++|. -|+++
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 799999999976 45678888999998 55553
No 57
>1o9a_B FNBB, fibronectin binding protein; cell adhesion/complex, HOST-pathogen protein complex, cell adhesion; NMR {Streptococcus dysgalactiae}
Probab=34.14 E-value=5.8 Score=24.14 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=13.6
Q ss_pred ceeecCCeEEEEEEeCCCch
Q 021899 270 GIALSKNFVKLVSWYDNEWG 289 (306)
Q Consensus 270 ~~~~~~~~~k~~~WyDnE~g 289 (306)
|..+.+.--|+-.-|||||-
T Consensus 14 ttevedskpk~sihfdnewp 33 (36)
T 1o9a_B 14 TTEVEDSKPKLSIHFDNEWP 33 (36)
T ss_dssp CBCCCCSCCCCBCCCCCCCS
T ss_pred ceeeecCCcceEEeccCcCC
Confidence 44455555677778999994
No 58
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=34.12 E-value=39 Score=30.08 Aligned_cols=36 Identities=22% Similarity=0.269 Sum_probs=29.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+.||+.....+.+..++++|. .|++.-|.+
T Consensus 68 ~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP~~ 103 (315)
T 3c1a_A 68 PEVEAVIIATPPATHAEITLAAIASGK-AVLVEKPLT 103 (315)
T ss_dssp TTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESSSC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCCCc
Confidence 379999999999999999999999994 477765643
No 59
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=34.02 E-value=46 Score=28.80 Aligned_cols=38 Identities=16% Similarity=0.209 Sum_probs=32.7
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 59 KTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 59 ~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
+.++|.++-|++.....+.+....++|.|.++--+|..
T Consensus 146 ~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~~ 183 (212)
T 3keo_A 146 DSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVH 183 (212)
T ss_dssp CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSSC
T ss_pred HcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCcc
Confidence 35899999999998888889999999999888877754
No 60
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=33.90 E-value=43 Score=30.73 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=25.4
Q ss_pred CCccEEEEecCCCCC----HHHHHHHHhCCCCeEEeeC
Q 021899 60 TGAEYVVESTGVFTD----KDKAAAHLKGGAKKVVISA 93 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s----~e~a~~h~~aGakkvvIsa 93 (306)
..+|+|++||+.... .+.+..++++|. -|+++
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGk--hVVta 116 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFESGM--NVVTA 116 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHHTTC--EEEEC
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHHCCC--eEEEc
Confidence 479999999987643 578899999998 56653
No 61
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=33.73 E-value=36 Score=30.28 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=30.4
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+.||+.....+.+..++++|. .|++.-|.+
T Consensus 64 ~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPla 99 (294)
T 1lc0_A 64 QEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYPMT 99 (294)
T ss_dssp SSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESCSC
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCCCC
Confidence 379999999999999999999999996 477766643
No 62
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=33.64 E-value=37 Score=30.80 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=30.2
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|-
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (349)
T 3i23_A 64 PEIELITICTPAHTHYDLAKQAILAG-KSVIVEKPF 98 (349)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECCC
Confidence 46999999999999999999999999 457776664
No 63
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=33.60 E-value=33 Score=30.92 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=30.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|.+
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP~~ 99 (344)
T 3euw_A 64 DDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKPID 99 (344)
T ss_dssp SCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSCSC
T ss_pred CCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECCCC
Confidence 479999999999999999999999994 588877743
No 64
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=33.58 E-value=42 Score=30.41 Aligned_cols=36 Identities=11% Similarity=0.176 Sum_probs=30.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|.+
T Consensus 65 ~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~~ 100 (354)
T 3db2_A 65 EDVEMVIITVPNDKHAEVIEQCARSGK-HIYVEKPIS 100 (354)
T ss_dssp SSCCEEEECSCTTSHHHHHHHHHHTTC-EEEEESSSC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHcCC-EEEEccCCC
Confidence 479999999999999999999999994 588877743
No 65
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=33.31 E-value=37 Score=30.40 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=30.4
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
++|+|+-||+.....+.+..++++| |.|++.-|.+
T Consensus 63 ~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~~ 97 (331)
T 4hkt_A 63 DIDAVVICTPTDTHADLIERFARAG-KAIFCEKPID 97 (331)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCSC
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecCCC
Confidence 7999999999999999999999999 4588877743
No 66
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=32.87 E-value=35 Score=32.94 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=27.3
Q ss_pred CCccEEEEecCC-CCCHHHHHHHHhCCCCeEEeeCC
Q 021899 60 TGAEYVVESTGV-FTDKDKAAAHLKGGAKKVVISAP 94 (306)
Q Consensus 60 ~gvdiV~e~tG~-~~s~e~a~~h~~aGakkvvIsap 94 (306)
.++|+|++|||. ....+.+..++++|. .|+..+|
T Consensus 77 ~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 77 PEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp TTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 479999999996 788899999999997 2444445
No 67
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=32.80 E-value=35 Score=27.23 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=31.9
Q ss_pred CCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeC
Q 021899 51 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 93 (306)
Q Consensus 51 ~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsa 93 (306)
++++++- .+|+|+-|++.....+.+...+++|+|.+++..
T Consensus 63 sl~el~~---~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 63 TLADVPE---KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp STTTCSS---CCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred CHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4666653 799999999987777777778889999998874
No 68
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=31.92 E-value=42 Score=30.31 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=30.4
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
++|+|+-||+.....+.+..++++| |.|++.-|.+
T Consensus 64 ~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~~ 98 (344)
T 3ezy_A 64 NVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPLS 98 (344)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCSC
T ss_pred CCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCCC
Confidence 7999999999999999999999999 4588877743
No 69
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=31.75 E-value=37 Score=30.56 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=30.8
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|.+
T Consensus 66 ~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~~ 101 (330)
T 3e9m_A 66 ETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKPFT 101 (330)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSSCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCCCC
Confidence 379999999999999999999999994 488877743
No 70
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=31.43 E-value=42 Score=30.12 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=31.4
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 59 KTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 59 ~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
+.++|+|+-||+.....+.+..++++|. -|++.-|-+
T Consensus 70 ~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKPla 106 (312)
T 3o9z_A 70 GEGVDYLSIASPNHLHYPQIRMALRLGA-NALSEKPLV 106 (312)
T ss_dssp TCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSSSC
T ss_pred CCCCcEEEECCCchhhHHHHHHHHHCCC-eEEEECCCC
Confidence 3579999999999999999999999995 577776643
No 71
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=31.26 E-value=42 Score=30.15 Aligned_cols=36 Identities=22% Similarity=0.174 Sum_probs=31.2
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|-+
T Consensus 65 ~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~a 100 (334)
T 3ohs_X 65 PNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPMG 100 (334)
T ss_dssp TTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSSS
T ss_pred CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCC
Confidence 37999999999999999999999999 4588877754
No 72
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=31.17 E-value=46 Score=29.97 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=31.7
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 59 KTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 59 ~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
+.++|+|+-||+.....+.+..++++|. .|++.-|-+
T Consensus 71 ~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKPla 107 (318)
T 3oa2_A 71 ATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKPLV 107 (318)
T ss_dssp TTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSCC
T ss_pred CCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECCCc
Confidence 4579999999999999999999999995 588877643
No 73
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=31.09 E-value=59 Score=29.73 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=29.7
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
.++|+|+-||+.....+.+..++++|. .|++--|-
T Consensus 82 ~~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~ 116 (383)
T 3oqb_A 82 KNDTMFFDAATTQARPGLLTQAINAGK-HVYCEKPI 116 (383)
T ss_dssp SSCCEEEECSCSSSSHHHHHHHHTTTC-EEEECSCS
T ss_pred CCCCEEEECCCchHHHHHHHHHHHCCC-eEEEcCCC
Confidence 469999999999999999999999995 47665554
No 74
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=31.09 E-value=43 Score=30.58 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=30.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|.+
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP~a 99 (359)
T 3e18_A 64 EKVDAVLIATPNDSHKELAISALEAGK-HVVCEKPVT 99 (359)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESSCC
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEeeCCCc
Confidence 379999999999999999999999994 588877743
No 75
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=30.80 E-value=28 Score=27.28 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=31.9
Q ss_pred CCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEee
Q 021899 51 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 92 (306)
Q Consensus 51 ~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIs 92 (306)
+.+++| . +|+|+-+++.....+..+.+.+.|+|.++++
T Consensus 52 sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~ 89 (122)
T 3ff4_A 52 ERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFN 89 (122)
T ss_dssp SCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEEC
T ss_pred ChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEEC
Confidence 566665 2 9999999999888888899999999987775
No 76
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=30.65 E-value=45 Score=29.90 Aligned_cols=36 Identities=19% Similarity=0.172 Sum_probs=30.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|-+
T Consensus 66 ~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~a 101 (329)
T 3evn_A 66 ESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKPFT 101 (329)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESSCC
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccCCc
Confidence 379999999999999999999999995 588877754
No 77
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=29.85 E-value=43 Score=30.23 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=30.8
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|.+
T Consensus 65 ~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~a 100 (344)
T 3mz0_A 65 ENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPLA 100 (344)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCSC
T ss_pred CCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCCC
Confidence 36999999999999999999999999 4588877743
No 78
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=29.79 E-value=45 Score=30.51 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=30.1
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|-
T Consensus 66 ~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKPl 100 (364)
T 3e82_A 66 PDVDLVVIASPNATHAPLARLALNAGK-HVVVDKPF 100 (364)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCCC
Confidence 479999999999999999999999995 57776664
No 79
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=29.41 E-value=47 Score=30.47 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=24.9
Q ss_pred CCccEEEEecCCCCC----HHHHHHHHhCCCCeEEeeC
Q 021899 60 TGAEYVVESTGVFTD----KDKAAAHLKGGAKKVVISA 93 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s----~e~a~~h~~aGakkvvIsa 93 (306)
..+|+|++||+.... .+.+..++++|. -|++.
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk--hVv~~ 114 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGK--HVVTS 114 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTC--EEEEC
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCC--eEEec
Confidence 469999999987654 788899999998 56654
No 80
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=29.09 E-value=51 Score=29.40 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=29.7
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
.++|+|+.||+.....+.+..++++|. .|++.-|.
T Consensus 61 ~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP~ 95 (325)
T 2ho3_A 61 SSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKPA 95 (325)
T ss_dssp SSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESSC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecCC
Confidence 479999999999999999999999995 47776664
No 81
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=29.04 E-value=45 Score=29.33 Aligned_cols=86 Identities=14% Similarity=0.174 Sum_probs=52.0
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCCCCCeEEcccCccccC--------C-CCCEEEcC--Chhhhhhhh
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYK--------P-ELDIVSNA--SCTTNCLAP 129 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~d~p~vV~gVN~~~~~--------~-~~~IVsn~--sCtT~~Lap 129 (306)
++|+|+|+|......+.+..++++|.. +||..++ .+.+.++ . ...++-.| |=-.|.+.-
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~~g~~-~VigTTG---------~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~ 114 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLIDNGIH-AVVGTTG---------FTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMH 114 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHHTTCE-EEECCCC---------CCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHH
T ss_pred CCcEEEEccChHHHHHHHHHHHHcCCC-EEEcCCC---------CCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHH
Confidence 689999999999999999999999984 5554432 2222211 0 22344433 344555555
Q ss_pred hhHHHhhhcCeeEEEEeeeeccCCccccccCCC
Q 021899 130 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS 162 (306)
Q Consensus 130 ~lk~L~~~fgI~~~~~tT~ha~t~~q~~~D~~~ 162 (306)
+++-.-+.| ..+.+.-.|= -+-+|.|+
T Consensus 115 l~~~aa~~~--~dieIiE~HH----~~K~DaPS 141 (245)
T 1p9l_A 115 FAKQAARFF--DSAEVIELHH----PHKADAPS 141 (245)
T ss_dssp HHHHHGGGC--SEEEEEEEEC----TTCCSSSC
T ss_pred HHHHHHhhc--CCEEEEECcc----cCCCCCCC
Confidence 566555665 3666666662 13356555
No 82
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=29.04 E-value=49 Score=29.94 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=30.8
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. -|++--|-+
T Consensus 81 ~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPla 116 (340)
T 1zh8_A 81 GLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKPIS 116 (340)
T ss_dssp SCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSSS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCCCC
Confidence 379999999999999999999999995 588877653
No 83
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=28.84 E-value=49 Score=30.18 Aligned_cols=36 Identities=25% Similarity=0.231 Sum_probs=31.2
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|-+
T Consensus 86 ~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPla 121 (357)
T 3ec7_A 86 KDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPLA 121 (357)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSSC
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCcc
Confidence 36999999999999999999999999 5688877754
No 84
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=28.22 E-value=51 Score=29.54 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=30.4
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. -|++.-|.+
T Consensus 65 ~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP~a 100 (336)
T 2p2s_A 65 ASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKPPL 100 (336)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSCC
T ss_pred CCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCCCC
Confidence 379999999999999999999999995 477766654
No 85
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=27.98 E-value=54 Score=29.85 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=30.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|-+
T Consensus 64 ~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP~a 99 (362)
T 3fhl_A 64 PEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKPFT 99 (362)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESSCC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecCCC
Confidence 469999999999999999999999995 588877743
No 86
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=27.63 E-value=49 Score=29.45 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=28.5
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
++|+|+.||+.....+.+..++++|. .|++.-|.
T Consensus 62 ~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP~ 95 (332)
T 2glx_A 62 DVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKPL 95 (332)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred CCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCCC
Confidence 69999999999998999999999995 46665554
No 87
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=27.56 E-value=46 Score=28.57 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=30.9
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
++|.|+.|++.....+.+...+++|++.++.-.|.+
T Consensus 140 ~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~ 175 (211)
T 2dt5_A 140 RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVV 175 (211)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCccc
Confidence 799999999998878888999999998777767765
No 88
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=27.12 E-value=29 Score=31.21 Aligned_cols=27 Identities=15% Similarity=0.085 Sum_probs=25.0
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGA 86 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGa 86 (306)
.++|+|+.||+.....+.+..++++|.
T Consensus 64 ~~~DvViiatp~~~h~~~~~~al~aG~ 90 (304)
T 3bio_A 64 ESVDVALVCSPSREVERTALEILKKGI 90 (304)
T ss_dssp SSCCEEEECSCHHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCchhhHHHHHHHHHcCC
Confidence 479999999999999999999999987
No 89
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=26.99 E-value=52 Score=29.90 Aligned_cols=34 Identities=9% Similarity=0.093 Sum_probs=29.0
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
++|+|+.||+.....+.+..++++|. .|++.-|.
T Consensus 71 ~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP~ 104 (362)
T 1ydw_A 71 EIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKPV 104 (362)
T ss_dssp TCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSSC
T ss_pred CCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecCC
Confidence 68999999999999999999999995 46666554
No 90
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=26.92 E-value=51 Score=29.31 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=29.7
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+.||+.....+.+..++++|. .|++.-|.+
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP~~ 99 (319)
T 1tlt_A 64 ASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKPLA 99 (319)
T ss_dssp TTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESSSC
T ss_pred cCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCCCC
Confidence 479999999999988999999999996 466665643
No 91
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=26.76 E-value=52 Score=29.69 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=30.3
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|-+
T Consensus 64 ~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~a 99 (345)
T 3f4l_A 64 PDVKLVVVCTHADSHFEYAKRALEAGK-NVLVEKPFT 99 (345)
T ss_dssp TTEEEEEECSCGGGHHHHHHHHHHTTC-EEEECSSSC
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHcCC-cEEEeCCCC
Confidence 369999999999999999999999994 577766643
No 92
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=26.08 E-value=54 Score=28.99 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=30.2
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
++|+|+-||+.....+.+..++++|. .|++.-|.+
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~~ 100 (308)
T 3uuw_A 66 KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPLA 100 (308)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSSS
T ss_pred cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCCC
Confidence 79999999999999999999999996 477766654
No 93
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=25.06 E-value=57 Score=29.49 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=30.5
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++| |.|++.-|-+
T Consensus 74 ~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~a 109 (354)
T 3q2i_A 74 TDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKPMA 109 (354)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSSC
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCCCc
Confidence 37999999999999999999999999 4577776643
No 94
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=25.00 E-value=59 Score=29.97 Aligned_cols=36 Identities=8% Similarity=0.109 Sum_probs=30.6
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|-+
T Consensus 63 ~~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP~a 98 (387)
T 3moi_A 63 VQMDAVYIASPHQFHCEHVVQASEQGL-HIIVEKPLT 98 (387)
T ss_dssp SCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCCC
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCCC-ceeeeCCcc
Confidence 369999999999999999999999994 577777743
No 95
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=24.70 E-value=59 Score=30.80 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=23.6
Q ss_pred ccEEEEecCCCCCHHHHHHHHhCCCCeEEeeC
Q 021899 62 AEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 93 (306)
Q Consensus 62 vdiV~e~tG~~~s~e~a~~h~~aGakkvvIsa 93 (306)
+|+|++|++.....+.+..++++|. -|+.+
T Consensus 94 iDvVV~ai~G~aGl~ptlaAi~aGK--~VvlA 123 (388)
T 1r0k_A 94 ADWTMAAIIGCAGLKATLAAIRKGK--TVALA 123 (388)
T ss_dssp CSEEEECCCSGGGHHHHHHHHHTTS--EEEEC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCC--EEEEe
Confidence 8999999955678888889999995 44444
No 96
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=24.68 E-value=37 Score=29.66 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=26.7
Q ss_pred EEecCCCCCHHHHHHHHhCCCCeEEeeCCCCCCC
Q 021899 66 VESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAP 99 (306)
Q Consensus 66 ~e~tG~~~s~e~a~~h~~aGakkvvIsaps~d~p 99 (306)
+.-.|...+.+.++..+++||.||+|....-..|
T Consensus 78 l~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p 111 (243)
T 4gj1_A 78 LQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDA 111 (243)
T ss_dssp EEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCH
T ss_pred eEeccccccHHHHHHHHHcCCCEEEEccccccCC
Confidence 4556778899999999999999999975543344
No 97
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=24.61 E-value=44 Score=30.64 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=29.5
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 94 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsap 94 (306)
.++|+|+.|+|.+.....+..++++|+ -++|.+
T Consensus 76 ~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 76 KEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred hCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 478999999999999999999999999 778865
No 98
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=24.36 E-value=49 Score=26.20 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=31.5
Q ss_pred CCCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCC
Q 021899 51 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 94 (306)
Q Consensus 51 ~~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsap 94 (306)
++++++- .+|+|+-|++.....+.....+++|++.+++..+
T Consensus 62 s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 62 SVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp SGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 3455442 6999999999876777777788899998888764
No 99
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=23.43 E-value=71 Score=28.98 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=30.9
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|-+
T Consensus 88 ~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~a 123 (350)
T 3rc1_A 88 DDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKPLT 123 (350)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSSC
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCCCC
Confidence 479999999999999999999999995 477777743
No 100
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=23.14 E-value=29 Score=27.46 Aligned_cols=27 Identities=19% Similarity=0.444 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHhccCcccccccccCcc
Q 021899 224 TYEEIKNAIKEESEGKLKGILGYTEED 250 (306)
Q Consensus 224 ~~e~i~~~l~~a~~~~lkgil~~~e~~ 250 (306)
..+||.+.+++..+...+|++-|++|.
T Consensus 71 Kp~eVdkm~~k~~q~~~dGl~iYCDde 97 (126)
T 2rbg_A 71 KKNEVDIFLKNLEKSEVDGLLVYCDDE 97 (126)
T ss_dssp CGGGHHHHHHHHTTCCCCEEEEEECGG
T ss_pred CHHHHHHHHHHHHHhCCCceEEEeCCC
Confidence 347999999999999999999998774
No 101
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=23.06 E-value=69 Score=30.17 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=29.2
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 95 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps 95 (306)
++|+|+.||+.....+.+..++++|. .|++.-|.
T Consensus 150 ~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKPl 183 (433)
T 1h6d_A 150 KIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKPM 183 (433)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred CCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCCC
Confidence 79999999999999999999999995 47776554
No 102
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=22.93 E-value=70 Score=30.11 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=30.2
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++|. .|++.-|.+
T Consensus 90 ~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP~a 125 (444)
T 2ixa_A 90 KNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVSGA 125 (444)
T ss_dssp TTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCCCC
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCCCc
Confidence 369999999999999999999999996 477766543
No 103
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=22.84 E-value=48 Score=29.97 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=30.6
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+-||+.....+.+..++++| |.|++--|-+
T Consensus 80 ~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~a 115 (330)
T 4ew6_A 80 PSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKPPG 115 (330)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSSSC
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCCCC
Confidence 47999999999999999999999999 4577776643
No 104
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=22.43 E-value=44 Score=29.75 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=27.5
Q ss_pred CccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCC
Q 021899 61 GAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 94 (306)
Q Consensus 61 gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsap 94 (306)
++|+|+++|......+.+..++++|.+ +|+..+
T Consensus 72 ~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 72 DFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred CCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 789999999888888999999999984 666554
No 105
>2jov_A Hypothetical protein CPE0013; alpha + beta sandwich, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens} SCOP: d.349.1.1
Probab=22.00 E-value=1.4e+02 Score=22.13 Aligned_cols=39 Identities=13% Similarity=0.002 Sum_probs=30.8
Q ss_pred ceEEEEEeeccCcc-eEEEEEEEecCCCCHHHHHHHHHHhcc
Q 021899 197 KLTGMSFRVPTVDV-SVVDLTVRLEKEATYEEIKNAIKEESE 237 (306)
Q Consensus 197 ki~~~avRVPv~~g-s~~dltv~~~~~~~~e~i~~~l~~a~~ 237 (306)
++-.+++|| -+| ..--+.+++++++..+.+.++++.-.+
T Consensus 4 RivTSTV~V--~gG~~~~~vpVKT~~pIPK~~i~e~m~~l~~ 43 (85)
T 2jov_A 4 DIFTSVVRV--RGSKKYNVVPVKSNKPVEISKWIDFSNVLSR 43 (85)
T ss_dssp EEEEEEEEE--CSSSSCSEEEEEEEEEECHHHHHHHHHHHTT
T ss_pred cEEEEEEEE--cCCCeEeeeeeccCCCCCHHHHHHHHHHHhC
Confidence 455666766 666 666789999999999999999887654
No 106
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=21.18 E-value=32 Score=27.37 Aligned_cols=40 Identities=8% Similarity=-0.164 Sum_probs=31.6
Q ss_pred CCCCCCccCCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCC
Q 021899 52 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 94 (306)
Q Consensus 52 ~~~~~w~~~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsap 94 (306)
+++++- .+|+|+-|+......+.+..+.++|+|.+++..+
T Consensus 64 l~el~~---~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 64 LLDLKE---PVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp GGGCCS---CCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred HHHCCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 445542 6999999999877777788888999999988754
No 107
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=20.34 E-value=88 Score=26.86 Aligned_cols=34 Identities=9% Similarity=0.137 Sum_probs=30.2
Q ss_pred cEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 63 EYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 63 diV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
|+|+.|++.....+.+...+++|++.++.-+|-.
T Consensus 147 D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 147 SVAILTVPAVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CEEEEecCchhHHHHHHHHHHcCCCEEEEcCcee
Confidence 9999999988888889999999998888888765
No 108
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=20.33 E-value=86 Score=27.87 Aligned_cols=36 Identities=19% Similarity=0.174 Sum_probs=29.7
Q ss_pred CCccEEEEecCCCCCHHHHHHHHhCCCCeEEeeCCCC
Q 021899 60 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 96 (306)
Q Consensus 60 ~gvdiV~e~tG~~~s~e~a~~h~~aGakkvvIsaps~ 96 (306)
.++|+|+.||+.....+.+..++++|. .|++.-|.+
T Consensus 62 ~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~~ 97 (323)
T 1xea_A 62 YGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKPLA 97 (323)
T ss_dssp GCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESCSC
T ss_pred cCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCCCc
Confidence 479999999999999999999999985 377766543
Done!