BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021904
(306 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BJI|A Chain A, High Resolution Structure Of Myo-Inositol Monophosphatase,
The Target Of Lithium Therapy
pdb|2BJI|B Chain B, High Resolution Structure Of Myo-Inositol Monophosphatase,
The Target Of Lithium Therapy
Length = 277
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 151/253 (59%), Gaps = 3/253 (1%)
Query: 41 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQF 99
D + +D AV A +AGE++R N+ K DLVT TD+ E ++ +K+++
Sbjct: 3 DPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKY 62
Query: 100 PAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVV 159
P+H FIGEE+ AA + LTD PTWI+DP+DGTTNFVHGFPFV +SIG + K G+V
Sbjct: 63 PSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIV 122
Query: 160 YNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSL 219
Y+ + D+++TG +G+GAF NG+ ++VS Q ++ KSLL TE G+ R T+ + I L
Sbjct: 123 YSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERL 182
Query: 220 L-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGK 278
L + +R G+ ALN+C +A G D +YE+G WD D +G
Sbjct: 183 LCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGI-HCWDVAGAGIIVTEAGGVLLDVTGG 241
Query: 279 DFDITAQRVAASN 291
FD+ ++RV AS+
Sbjct: 242 PFDLMSRRVIASS 254
>pdb|4AS5|A Chain A, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|B Chain B, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|C Chain C, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|D Chain D, Structure Of Mouse Inositol Monophosphatase 1
Length = 277
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 150/253 (59%), Gaps = 3/253 (1%)
Query: 41 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQF 99
D + +D AV A++AGE+IR +V K DLVT TD+ E ++ + +K+++
Sbjct: 3 DPWQECMDYAVILARQAGEMIREALKNEMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKY 62
Query: 100 PAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVV 159
P H FIGEE+ AA T T++PTW++DP+DGTTNFVH FPFV +SIG + K G+V
Sbjct: 63 PCHSFIGEESVAAGEKTVFTEQPTWVIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIV 122
Query: 160 YNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSL 219
Y+ + D+++TG +G+GAF NG+ ++VS Q ++ KSLL TE G+ R TL + + L
Sbjct: 123 YSCVEDKMYTGRKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRKPETLRIVLSNMEKL 182
Query: 220 L-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGK 278
+ +R G+ A+N+C +A G D +YE+G WD D +G
Sbjct: 183 CSIPIHGIRSVGTAAVNMCLVATGGADAYYEMGIHC-WDMAGAGIIVTEAGGVLMDVTGG 241
Query: 279 DFDITAQRVAASN 291
FD+ ++R+ A+N
Sbjct: 242 PFDLMSRRIIAAN 254
>pdb|1IMA|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMA|B Chain B, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMB|A Chain A, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMB|B Chain B, Structural Analysis Of Inositol Monophosphatase Complexes
With Substrates
pdb|1IMC|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IMC|B Chain B, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IMD|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-metal Ion Catalysis
pdb|1IMD|B Chain B, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-metal Ion Catalysis
pdb|1IME|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IME|B Chain B, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|1IMF|A Chain A, Structural Studies Of Metal Binding By Inositol
Monophosphatase: Evidence For Two-Metal Ion Catalysis
pdb|4AS4|A Chain A, Structure Of Human Inositol Monophosphatase 1
pdb|4AS4|B Chain B, Structure Of Human Inositol Monophosphatase 1
Length = 277
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 150/256 (58%), Gaps = 3/256 (1%)
Query: 41 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQF 99
D + +D AV A++AGE++ NV K VDLVT TD+ E ++ + +K+++
Sbjct: 3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKY 62
Query: 100 PAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVV 159
P+H FIGEE+ AA + LTD PTWI+DP+DGTTNFVH FPFV +SIG + K GVV
Sbjct: 63 PSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVV 122
Query: 160 YNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSL 219
Y+ + +++T +G+GAF NG+ ++VS Q ++ KSLL TE G+ R T+ + + L
Sbjct: 123 YSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKL 182
Query: 220 L-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGK 278
V +R G+ A+N+C +A G D +YE+G WD D +G
Sbjct: 183 FCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHC-WDVAGAGIIVTEAGGVLMDVTGG 241
Query: 279 DFDITAQRVAASNPHV 294
FD+ ++RV A+N +
Sbjct: 242 PFDLMSRRVIAANNRI 257
>pdb|2HHM|A Chain A, Structure Of Inositol Monophosphatase, The Putative Target
Of Lithium Therapy
pdb|2HHM|B Chain B, Structure Of Inositol Monophosphatase, The Putative Target
Of Lithium Therapy
pdb|1AWB|A Chain A, Human Myo-Inositol Monophosphatase In Complex With D-
Inositol-1-Phosphate And Calcium
pdb|1AWB|B Chain B, Human Myo-Inositol Monophosphatase In Complex With D-
Inositol-1-Phosphate And Calcium
Length = 276
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 150/256 (58%), Gaps = 3/256 (1%)
Query: 41 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQF 99
D + +D AV A++AGE++ NV K VDLVT TD+ E ++ + +K+++
Sbjct: 2 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKY 61
Query: 100 PAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVV 159
P+H FIGEE+ AA + LTD PTWI+DP+DGTTNFVH FPFV +SIG + K GVV
Sbjct: 62 PSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVV 121
Query: 160 YNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSL 219
Y+ + +++T +G+GAF NG+ ++VS Q ++ KSLL TE G+ R T+ + + L
Sbjct: 122 YSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKL 181
Query: 220 L-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGK 278
V +R G+ A+N+C +A G D +YE+G WD D +G
Sbjct: 182 FCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHC-WDVAGAGIIVTEAGGVLMDVTGG 240
Query: 279 DFDITAQRVAASNPHV 294
FD+ ++RV A+N +
Sbjct: 241 PFDLMSRRVIAANNRI 256
>pdb|2FVZ|A Chain A, Human Inositol Monophosphosphatase 2
pdb|2FVZ|B Chain B, Human Inositol Monophosphosphatase 2
pdb|2FVZ|C Chain C, Human Inositol Monophosphosphatase 2
pdb|2FVZ|D Chain D, Human Inositol Monophosphosphatase 2
Length = 273
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Query: 50 AVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEE 108
AV A RAG+IIR + K V K DLVTETD EDLI + L+++FP+H+FI EE
Sbjct: 8 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEE 67
Query: 109 TTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELF 168
A+ LT PTWI+DP+DGT NFVH FP V +SIG + + GV+Y+ + L+
Sbjct: 68 AAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLY 127
Query: 169 TGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLR 227
TG RG+GAF NG+ ++VS +T+L K+L+ TE G KRD TL + + LL K +R
Sbjct: 128 TGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVR 187
Query: 228 MSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGKDFDITAQRV 287
+ GS L LC +A G D +Y+ G WD D SG D+ A RV
Sbjct: 188 VIGSSTLALCHLASGAADAYYQFGL-HCWDLAAATVIIREAGGIVIDTSGGPLDLMACRV 246
Query: 288 AASN 291
A++
Sbjct: 247 VAAS 250
>pdb|2CZH|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Phosphate Ion (Orthorhombic Form)
pdb|2CZH|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Phosphate Ion (Orthorhombic Form)
pdb|2CZI|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Calcium And Phosphate Ions
pdb|2CZK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Trigonal Form)
pdb|2DDK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Orthorhombic Form)
pdb|2DDK|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Orthorhombic Form)
Length = 299
Score = 190 bits (483), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Query: 50 AVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEE 108
AV A RAG+IIR + K V K DLVTETD EDLI + L+++FP+H+FI EE
Sbjct: 34 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEE 93
Query: 109 TTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELF 168
A+ LT PTWI+DP+DGT NFVH FP V +SIG + + GV+Y+ + L+
Sbjct: 94 AAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLY 153
Query: 169 TGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLR 227
TG RG+GAF NG+ ++VS +T+L K+L+ TE G KRD TL + + LL K +R
Sbjct: 154 TGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVR 213
Query: 228 MSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGKDFDITAQRV 287
+ GS L LC +A G D +Y+ G WD D SG D+ A RV
Sbjct: 214 VIGSSTLALCHLASGAADAYYQFGL-HCWDLAAATVIIREAGGIVIDTSGGPLDLMACRV 272
Query: 288 AASN 291
A++
Sbjct: 273 VAAS 276
>pdb|2QFL|A Chain A, Structure Of Suhb: Inositol Monophosphatase And Extragenic
Suppressor From E. Coli
Length = 267
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 46 FLDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPAHK 103
L+ AV AA++AG +I + VE KG D VT DKA E +I + +++ +P H
Sbjct: 4 MLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHT 63
Query: 104 FIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNP 162
I EE+ G E TD+ W++DPLDGTTNF+ P +SI + I V VVY+P
Sbjct: 64 IITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDP 119
Query: 163 IMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFK 222
+ +ELFT RGQGA NG ++ S+ +L ++LAT K K N + L +
Sbjct: 120 MRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNE 178
Query: 223 VRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGKDFDI 282
R +GS AL+L +A GR+D F+E+G PWD D +G +
Sbjct: 179 CADFRATGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYM 237
Query: 283 TAQRVAASNPHVKDAFIEALR 303
+ A NP V A + +R
Sbjct: 238 LTGNIVAGNPRVVKAMLANMR 258
>pdb|3LUZ|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Via Combined Iodide Sad
Molecular Replacement
pdb|3LUZ|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Via Combined Iodide Sad
Molecular Replacement
pdb|3LV0|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Native
pdb|3LV0|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Native
Length = 267
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Query: 47 LDTAVDAAKRAGE-IIRN-GFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKF 104
++ V AA +AG ++R+ G Q V KG D V++ D+ E +IFN L + P F
Sbjct: 11 MNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGF 70
Query: 105 IGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGL-TIGKIPIVGVVYNPI 163
+ EE+ G + +IVDPLDGTTNF+HG PF +SI L + GKI + GV+YNPI
Sbjct: 71 LMEESEEIIGED---SQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKI-VAGVIYNPI 126
Query: 164 MDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKV 223
DELFT RG GAFFN + +VS++ L ++AT +P + +++ +V
Sbjct: 127 NDELFTAERGSGAFFNDRRCRVSARRRLEDCVIAT-GMPHLGRPGHGTYLIELRNVMAEV 185
Query: 224 RSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGKDFDIT 283
+R G+ AL+L +A GR D F+E WD D G +
Sbjct: 186 SGIRRFGTAALDLAYVAAGRTDGFWEDNL-QIWDMAAGILMVREAGGFVTDKEGGNDIFR 244
Query: 284 AQRVAASNPHVKDAFIEALRQ 304
+ + A N H++ AL++
Sbjct: 245 KKNIIAGNEHIRIKLERALKK 265
>pdb|2PCR|A Chain A, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|B Chain B, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|C Chain C, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|D Chain D, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
Length = 264
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 41 DSLAKFLDTAVDAAKRAGEIIRNGFYQTK--NVEHKGQVDLVTETDKACEDLIFNHLKQQ 98
++L K+L+ A AA G++++ F + K N+E KG+ D V+ DK E+ I + +
Sbjct: 2 ENLKKYLEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKF 61
Query: 99 FPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGV 158
FP H+ +GEE A +E W +DPLDGT N+++GFP +S+GL G+ PIVG
Sbjct: 62 FPDHEVVGEEXGAEGSGSEYR----WFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGA 117
Query: 159 VYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINS 218
VY P D+L+ G +G GA+ NGK IKV L K R + + N
Sbjct: 118 VYLPYFDKLYWGAKGLGAYVNGKRIKVKDNESL-KHAGVVYGFPSRSRRDISIYLNIFKD 176
Query: 219 LLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWD 257
+ ++V S R G+ A++LC +A G D E PWD
Sbjct: 177 VFYEVGSXRRPGAAAVDLCXVAEGIFDGXXEFEX-KPWD 214
>pdb|2P3N|A Chain A, Thermotoga Maritima Impase Tm1415
pdb|2P3N|B Chain B, Thermotoga Maritima Impase Tm1415
pdb|2P3N|C Chain C, Thermotoga Maritima Impase Tm1415
pdb|2P3N|D Chain D, Thermotoga Maritima Impase Tm1415
pdb|2P3V|A Chain A, Thermotoga Maritima Impase Tm1415
pdb|2P3V|B Chain B, Thermotoga Maritima Impase Tm1415
pdb|2P3V|C Chain C, Thermotoga Maritima Impase Tm1415
pdb|2P3V|D Chain D, Thermotoga Maritima Impase Tm1415
Length = 256
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 15/251 (5%)
Query: 47 LDTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFI 105
LD ++ ++ G ++ + + NVE K G D+VTE D+ + +I + +++ FP +
Sbjct: 4 LDFSIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIM 63
Query: 106 GEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMD 165
EE G + WI+DP+DGT NFVHG P IS+ +GVV+ P ++
Sbjct: 64 AEEGIFEKG------DRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALN 117
Query: 166 ELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRS 225
E G GAFFNG+ I+VS L + + +T + +D + I + + R
Sbjct: 118 ETLYAEEGSGAFFNGERIRVSENASLEECVGSTGS-------YVDFTGKFIERMEKRTRR 170
Query: 226 LRMSGSCALNLCGIACGRLDLFYELGFGGPWDXXXXXXXXXXXXXXXYDPSGKDFDITAQ 285
+R+ GS ALN + GR+D F PWD D SGK+ + ++
Sbjct: 171 IRILGSAALNAAYVGAGRVDFFVTWRI-NPWDIAAGLIIVKEAGGMVTDFSGKEANAFSK 229
Query: 286 RVAASNPHVKD 296
SN + D
Sbjct: 230 NFIFSNGLIHD 240
>pdb|3T0J|A Chain A, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|B Chain B, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|C Chain C, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|D Chain D, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
Length = 283
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 55 KRAGEIIRNGFYQTKNVEHKGQV-DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAAC 113
+ AG I+ Q +E K DLVT DKA ED IF+ + + +P H+ +GEE
Sbjct: 20 QEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGH- 78
Query: 114 GATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRG 173
+ + W+VDP+DGT NFVH ISIG+ I P G VY+ + D L+ G
Sbjct: 79 -DIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVG 137
Query: 174 QGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCA 233
+GA+ +P+K + + L +S++ KP L I + RS R GS A
Sbjct: 138 EGAYRGSQPLKPLNDSNLRQSIIGINP-NWLTKPILGEIFKEI---VNDSRSARAYGSAA 193
Query: 234 LNLCGIACGRLDLFYELGFGGPWD 257
L + +A G L+ + PWD
Sbjct: 194 LEIVSVATGNLEAYMTPRL-QPWD 216
>pdb|1XI6|A Chain A, Extragenic Suppressor From Pyrococcus Furiosus
Pfu-1862794- 001
Length = 262
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 83 TDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFV 142
DK EDLI + + + + EE G + E T IVDPLDG+ NF+ G PF
Sbjct: 54 VDKLAEDLILSRITEL--GVNVVSEE----VGVIDNESEYTVIVDPLDGSYNFIAGIPFF 107
Query: 143 CISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGT 202
+S+ + PI ++Y P+ + F G+ G+GAF NGK IKV T
Sbjct: 108 ALSLAVFKKDKPIYAIIYEPMTERFFEGIPGEGAFLNGKRIKVRK--------------T 153
Query: 203 KRDKPTLD-ASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYEL-GFGGPWDXXX 260
+KP++ S + + ++ V+ R G+ AL L +A G LD ++ + P D
Sbjct: 154 PDEKPSISFYSRGKGHEIVKHVKRTRTLGAIALELAYLAMGALDGVVDVRKYVRPTDIAA 213
Query: 261 XXXXXXXXXXXXYDPSGKDFDIT 283
D +GKD DI+
Sbjct: 214 GTIIAKEAGALIKDSAGKDIDIS 236
>pdb|2Q74|A Chain A, Mycobacterium Tuberculosis Suhb
pdb|2Q74|B Chain B, Mycobacterium Tuberculosis Suhb
pdb|2Q74|C Chain C, Mycobacterium Tuberculosis Suhb
Length = 299
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 78 DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATEL-TDEPTWIVDPLDGTTNFV 136
D VT D E L+ + L Q P +GEE T +D TW++DP+DGT NFV
Sbjct: 54 DPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFV 113
Query: 137 HGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKP----IKVSSQTELV 192
+G P +SIG +G I + G V + +++ G GA + ++ + EL
Sbjct: 114 YGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELS 173
Query: 193 KSLLATEAGTK---RDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYE 249
+LL T G R+K + ++ VR +R GS AL+LC +A GRLD +YE
Sbjct: 174 MALLGTGFGYSVRCREK-----QAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYE 228
Query: 250 LGF 252
G
Sbjct: 229 HGV 231
>pdb|1VDW|A Chain A, A Hypothetical Protein Ph1897 From Pyrococcus Horikoshii
With Similarities For Inositol-1 Monophosphatase
pdb|1VDW|B Chain B, A Hypothetical Protein Ph1897 From Pyrococcus Horikoshii
With Similarities For Inositol-1 Monophosphatase
Length = 254
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 29/230 (12%)
Query: 83 TDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFV 142
DK E++I + K + EE G + + T +VDPLDG+ NF++G PF
Sbjct: 46 VDKVAENIIISKFKDL--GVNVVSEE----IGRIDQGSDYTVVVDPLDGSYNFINGIPFF 99
Query: 143 CISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVKSLLATEAGT 202
+S+ + K PI +Y PI++ L+ G+ G+G++ NG+ IKV E
Sbjct: 100 AVSVAIFHEKDPIYAFIYEPIVERLYEGIPGKGSYLNGEKIKVRELAE------------ 147
Query: 203 KRDKPTLDASTN-RINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYEL-GFGGPWDXXX 260
KP++ T + ++ KV+ R G+ AL L +A G LD ++ + P D
Sbjct: 148 ---KPSISFYTKGKGTKIIDKVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAA 204
Query: 261 XXXXXXXXXXXXYDPSGKDFDIT------AQRVAASNPHVKDAFIEALRQ 304
D GKD +IT +AA+N + + + ++ +
Sbjct: 205 GVVIAREAGAIVKDLDGKDVEITFSATEKVNIIAANNEELLETILRSIEK 254
>pdb|3RYD|A Chain A, Crystal Strucutre Of Ca Bound Impase Family Protein From
Staphylococcus Aureus
pdb|3RYD|C Chain C, Crystal Strucutre Of Ca Bound Impase Family Protein From
Staphylococcus Aureus
Length = 273
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 74 KGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTT 133
+ + DLVT DK + L FP H+ + EE + A E+ WI+DP+DGT
Sbjct: 45 RHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAEEKSNAMITNEINH--LWIMDPIDGTA 102
Query: 134 NFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVK 193
N V CI + P++ VY+ +L+ +RG+GAF NG ++ +L
Sbjct: 103 NLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLED 162
Query: 194 SLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFG 253
++++ A + + + L S R+ G+C L+ +A G+
Sbjct: 163 AIISFNAQV--------MNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTN-P 213
Query: 254 GPWD 257
PWD
Sbjct: 214 KPWD 217
>pdb|3QMF|A Chain A, Crystal Strucuture Of An Inositol Monophosphatase Family
Protein (Sas2203) From Staphylococcus Aureus Mssa476
pdb|3QMF|B Chain B, Crystal Strucuture Of An Inositol Monophosphatase Family
Protein (Sas2203) From Staphylococcus Aureus Mssa476
Length = 273
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 74 KGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTT 133
+ + DLVT DK + L FP H+ + EE + A E+ WI+DP+DGT
Sbjct: 45 RHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAEEKSNAMITNEINH--LWIMDPIDGTA 102
Query: 134 NFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVSSQTELVK 193
N V CI + P++ VY+ +L+ +RG+GAF NG ++ +L
Sbjct: 103 NLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLED 162
Query: 194 SLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFG 253
++++ A + + + L S R+ G+C L+ +A G+
Sbjct: 163 AIISFNAQV--------MNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTN-P 213
Query: 254 GPWD 257
PWD
Sbjct: 214 KPWD 217
>pdb|1DK4|A Chain A, Crystal Structure Of Mj0109 Gene Product Inositol
Monophosphatase
pdb|1DK4|B Chain B, Crystal Structure Of Mj0109 Gene Product Inositol
Monophosphatase
pdb|1G0H|A Chain A, Crystal Structure Of Mj0109 Gene Product Inositol
Monophosphatase-Fructose 1,6 Bisphosphatase
pdb|1G0H|B Chain B, Crystal Structure Of Mj0109 Gene Product Inositol
Monophosphatase-Fructose 1,6 Bisphosphatase
pdb|1G0I|A Chain A, Crystal Structure Of Mj0109 Gene Product Inositol
Monophosphatase-Fructose 1,6 Bisphosphatase
pdb|1G0I|B Chain B, Crystal Structure Of Mj0109 Gene Product Inositol
Monophosphatase-Fructose 1,6 Bisphosphatase
Length = 252
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 84 DKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVC 143
DK ED+ +LK + EE G + + E T ++DP+DG+ NF++G PF
Sbjct: 44 DKISEDIALKYLKSL--NVNIVSEE----LGVIDNSSEWTVVIDPIDGSFNFINGIPFFA 97
Query: 144 ISIGLTIGKIPIVGVVYNPIMDELFTGVRGQGAFFNGKPIKVS--SQTELVKSLLATEAG 201
G+ P G+ Y + + +G+GA+ NG+ IKV + +V S ++
Sbjct: 98 FCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNIVISYYPSK-- 155
Query: 202 TKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYEL 250
K L+ N KV+ +R+ G+ L +C +A G LD +++
Sbjct: 156 ----KIDLEKLRN-------KVKRVRIFGAFGLEMCYVAKGTLDAVFDV 193
>pdb|3B8B|A Chain A, Crystal Structure Of Cysq From Bacteroides
Thetaiotaomicron, A Bacterial Member Of The Inositol
Monophosphatase Family
Length = 292
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 22/226 (9%)
Query: 50 AVDAAKRAGEIIRNGFYQTKN---VEHKGQVDLVTETDKACEDLIFNHLKQQ-FPAHKFI 105
A+DAA +AGE I + + K+ +E K +T D+ + I L + FP +
Sbjct: 27 AIDAALKAGEKILSIYEDPKSDFEIERKADNSPLTIADRKAHEAIVAILNETPFP---VL 83
Query: 106 GEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMD 165
EE A + WIVDPLDGT F+ ++I L +P+ GV+Y P+
Sbjct: 84 SEEGKHXDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVXGVIYVPVKK 143
Query: 166 ELFTGVRGQGAFFNG-------------KPIKVSSQTELVKSLLATEAGTKRDKPTLDAS 212
EL+ V G GA+ + I+ S + L + A R T +
Sbjct: 144 ELYFAVEGTGAYKXSGIVGLEDEGVTLQQXIEKSERXPLADARDHFIAVASRSHLTPETE 203
Query: 213 TNRINSLLFKVRSLRM-SGSCALNLCGIACGRLDLFYELGFGGPWD 257
T I L K ++ + S ++ +C +A G+ D++ WD
Sbjct: 204 T-YIADLKKKHGNVELISSGSSIKICLVAEGKADVYPRFAPTXEWD 248
>pdb|2WEF|A Chain A, Human 3'(2'), 5'-Bisphosphate Nucleotidase 1 (Bpnt1) In
Complex With Amp, Po4 And Magnesium
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 36/171 (21%)
Query: 43 LAKFLDTAVDAAKRAGEIIRNGFYQTK--NVEHKGQVDLVTETDKACEDLIFNHLKQQFP 100
L + + +A A++AG I+R + VE DL T+ D+ + I + L ++FP
Sbjct: 4 LMRLVASAYSIAQKAGMIVRRVIAEGDLGIVEKTCATDLQTKADRLAQMSICSSLARKFP 63
Query: 101 AHKFIGEETTAACGA-TELTDEPTW----------------------IVDPLDGTTNFVH 137
IGEE + EL ++ W VDPLDGT +
Sbjct: 64 KLTIIGEEDLPSEEVDQELIEDSQWEEILKQPCPSQYSAIKEEDLVVWVDPLDGTKEYTE 123
Query: 138 G-FPFVCISIGLTIGKIPIVGVVYNP----------IMDELFTGVRGQGAF 177
G V + IG+ I GV+ P ++ GV G GAF
Sbjct: 124 GLLDNVTVLIGIAYEGKAIAGVINQPYYNYEAGPDAVLGRTIWGVLGLGAF 174
>pdb|1LBV|A Chain A, Crystal Structure Of Apo-Form (P21) Of Dual Activity
FbpaseIMPASE (AF2372) FROM ARCHAEOGLOBUS FULGIDUS
pdb|1LBV|B Chain B, Crystal Structure Of Apo-Form (P21) Of Dual Activity
FbpaseIMPASE (AF2372) FROM ARCHAEOGLOBUS FULGIDUS
pdb|1LBW|A Chain A, Crystal Structure Of Apo-Form (P32) Of Dual Activity
FbpaseIMPASE (AF2372) FROM ARCHAEOGLOBUS FULGIDUS
pdb|1LBW|B Chain B, Crystal Structure Of Apo-Form (P32) Of Dual Activity
FbpaseIMPASE (AF2372) FROM ARCHAEOGLOBUS FULGIDUS
pdb|1LBX|A Chain A, Crystal Structure Of A Ternary Complex Of Dual Activity
Fbpase/impase (af2372) From Archaeoglobus Fulgidus With
Calcium Ions And D-myo-inositol-1-phosphate
pdb|1LBX|B Chain B, Crystal Structure Of A Ternary Complex Of Dual Activity
Fbpase/impase (af2372) From Archaeoglobus Fulgidus With
Calcium Ions And D-myo-inositol-1-phosphate
pdb|1LBY|A Chain A, Crystal Structure Of A Complex (p32 Crystal Form) Of Dual
Activity Fbpase/impase (af2372) From Archaeoglobus
Fulgidus With 3 Manganese Ions, Fructose-6-phosphate,
And Phosphate Ion
pdb|1LBY|B Chain B, Crystal Structure Of A Complex (p32 Crystal Form) Of Dual
Activity Fbpase/impase (af2372) From Archaeoglobus
Fulgidus With 3 Manganese Ions, Fructose-6-phosphate,
And Phosphate Ion
pdb|1LBZ|A Chain A, Crystal Structure Of A Complex (p32 Crystal Form) Of Dual
Activity Fbpase/impase (af2372) From Archaeoglobus
Fulgidus With 3 Calcium Ions And Fructose-1,6
Bisphosphate
pdb|1LBZ|B Chain B, Crystal Structure Of A Complex (p32 Crystal Form) Of Dual
Activity Fbpase/impase (af2372) From Archaeoglobus
Fulgidus With 3 Calcium Ions And Fructose-1,6
Bisphosphate
Length = 252
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 23/129 (17%)
Query: 126 VDPLDGTTNFVHGFPFVCISIGLTIG---KIPIVGVVYN-PIMDELFTGVRGQGAFFNGK 181
+DPLDGT N G P +S+ + K G VYN DE + GA+ NG+
Sbjct: 81 LDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYVYNLATGDEYYAD--SSGAYRNGE 138
Query: 182 PIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIAC 241
I+VS EL + + K F + +R+ GS A LC A
Sbjct: 139 RIEVSDAEELYCNAIIYYPDRK-----------------FPFKRMRIFGSAATELCFFAD 181
Query: 242 GRLDLFYEL 250
G D F ++
Sbjct: 182 GSFDCFLDI 190
>pdb|1JP4|A Chain A, Crystal Structure Of An Enzyme Displaying Both Inositol-
Polyphosphate 1-Phosphatase And 3'-Phosphoadenosine-5'-
Phosphate Phosphatase Activities
Length = 308
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 38/172 (22%)
Query: 43 LAKFLDTAVDAAKRAGEIIRNGFYQTK--NVEHKGQVDLVTETDKACEDLIFNHLKQQFP 100
L + + +A A++AG I+R + V+ DL T+ D+ + I + L ++FP
Sbjct: 8 LMRLVASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFP 67
Query: 101 AHKFIGEE------------------------TTAACGATELTDEPTWIVDPLDGTTNFV 136
IGEE + A + D W VDP+DGT +
Sbjct: 68 KLTIIGEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVW-VDPVDGTKEYT 126
Query: 137 HG-FPFVCISIGLTIGKIPIVGVVYNP----------IMDELFTGVRGQGAF 177
G V + IG+ I G++ P ++ GV G GAF
Sbjct: 127 EGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAF 178
>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p
pdb|1K9Y|A Chain A, The Papase Hal2p Complexed With Magnesium Ions And
Reaction Products: Amp And Inorganic Phosphate
pdb|1K9Z|A Chain A, The Papase Hal2p Complexed With Zinc Ions
pdb|1KA0|A Chain A, The Papase Hal2p Complexed With A Sodium Ion And The
Reaction Product Amp
pdb|1KA1|A Chain A, The Papase Hal2p Complexed With Calcium And Magnesium Ions
And Reaction Substrate: Pap
Length = 357
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 27/149 (18%)
Query: 124 WIVDPLDGTTNFVHGFPF-VCISIGLTIGKIPIVGVVYNPIM----------------DE 166
W +DP+DGT F+ G F VC++ L + + +G + P +
Sbjct: 139 WCLDPIDGTKGFLRGEQFAVCLA--LIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGY 196
Query: 167 LFTGVRGQGAFFNGKPIKVSSQTELVKSL-----LATEAGTKRDKPTLDASTNRINSLLF 221
+F VRG GAF++ S V+ L + T G ++ + D T N L
Sbjct: 197 IFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSHDEQTAIKNKLNI 256
Query: 222 KVRSLRMSGSCALNLCGIACGRLDLFYEL 250
+SL + C +A G D++ L
Sbjct: 257 S-KSLHLDSQA--KYCLLALGLADVYLRL 282
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 42 SLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDL-------VTETDKACEDLIFNH 94
+L + L A A ++A + + Q++ + HK + VT D A + +I N
Sbjct: 2 ALERELLVATQAVRKASLLTKR--IQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINA 59
Query: 95 LKQQFPAHKFIGEETTAA 112
+K FP K +GEE+++
Sbjct: 60 IKSNFPDDKVVGEESSSG 77
>pdb|2Y7T|A Chain A, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|B Chain B, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|C Chain C, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|D Chain D, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|E Chain E, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|F Chain F, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|G Chain G, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|H Chain H, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|I Chain I, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|J Chain J, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|K Chain K, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|L Chain L, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|M Chain M, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|N Chain N, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|O Chain O, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|P Chain P, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|Q Chain Q, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|R Chain R, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|S Chain S, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7T|T Chain T, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|A Chain A, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|B Chain B, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|C Chain C, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|D Chain D, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|E Chain E, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|F Chain F, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|G Chain G, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|H Chain H, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|I Chain I, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|J Chain J, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|K Chain K, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|L Chain L, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|M Chain M, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|N Chain N, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|O Chain O, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|P Chain P, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|Q Chain Q, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|R Chain R, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|S Chain S, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7U|T Chain T, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|A Chain A, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|B Chain B, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|C Chain C, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|D Chain D, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|E Chain E, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|F Chain F, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|G Chain G, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|H Chain H, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|I Chain I, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|J Chain J, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|K Chain K, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|L Chain L, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|M Chain M, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|N Chain N, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|O Chain O, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|P Chain P, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|Q Chain Q, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|R Chain R, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|S Chain S, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2Y7V|T Chain T, X-Ray Structure Of The Grapevine Fanleaf Virus
pdb|2YI2|A Chain A, Grapevine Fanleaf Virus
pdb|2YI2|B Chain B, Grapevine Fanleaf Virus
pdb|2YI2|C Chain C, Grapevine Fanleaf Virus
pdb|2YI2|D Chain D, Grapevine Fanleaf Virus
pdb|2YI2|E Chain E, Grapevine Fanleaf Virus
pdb|2YI2|F Chain F, Grapevine Fanleaf Virus
pdb|2YI2|G Chain G, Grapevine Fanleaf Virus
pdb|2YI2|H Chain H, Grapevine Fanleaf Virus
pdb|2YI2|I Chain I, Grapevine Fanleaf Virus
pdb|2YI2|J Chain J, Grapevine Fanleaf Virus
pdb|2YI2|K Chain K, Grapevine Fanleaf Virus
pdb|2YI2|L Chain L, Grapevine Fanleaf Virus
pdb|2YI2|M Chain M, Grapevine Fanleaf Virus
pdb|2YI2|N Chain N, Grapevine Fanleaf Virus
pdb|2YI2|O Chain O, Grapevine Fanleaf Virus
pdb|2YI2|P Chain P, Grapevine Fanleaf Virus
pdb|2YI2|Q Chain Q, Grapevine Fanleaf Virus
pdb|2YI2|R Chain R, Grapevine Fanleaf Virus
pdb|2YI2|S Chain S, Grapevine Fanleaf Virus
pdb|2YI2|T Chain T, Grapevine Fanleaf Virus
pdb|2YI3|A Chain A, Grapevine Fanleaf Virus
pdb|2YI3|B Chain B, Grapevine Fanleaf Virus
pdb|2YI3|C Chain C, Grapevine Fanleaf Virus
pdb|2YI3|D Chain D, Grapevine Fanleaf Virus
pdb|2YI3|E Chain E, Grapevine Fanleaf Virus
pdb|2YI3|F Chain F, Grapevine Fanleaf Virus
pdb|2YI3|G Chain G, Grapevine Fanleaf Virus
pdb|2YI3|H Chain H, Grapevine Fanleaf Virus
pdb|2YI3|I Chain I, Grapevine Fanleaf Virus
pdb|2YI3|J Chain J, Grapevine Fanleaf Virus
pdb|2YI3|K Chain K, Grapevine Fanleaf Virus
pdb|2YI3|L Chain L, Grapevine Fanleaf Virus
pdb|2YI3|M Chain M, Grapevine Fanleaf Virus
pdb|2YI3|N Chain N, Grapevine Fanleaf Virus
pdb|2YI3|O Chain O, Grapevine Fanleaf Virus
pdb|2YI3|P Chain P, Grapevine Fanleaf Virus
pdb|2YI3|Q Chain Q, Grapevine Fanleaf Virus
pdb|2YI3|R Chain R, Grapevine Fanleaf Virus
pdb|2YI3|S Chain S, Grapevine Fanleaf Virus
pdb|2YI3|T Chain T, Grapevine Fanleaf Virus
pdb|2YI4|A Chain A, Grapevine Fanleaf Virus
pdb|2YI4|B Chain B, Grapevine Fanleaf Virus
pdb|2YI4|C Chain C, Grapevine Fanleaf Virus
pdb|2YI4|D Chain D, Grapevine Fanleaf Virus
pdb|2YI4|E Chain E, Grapevine Fanleaf Virus
pdb|2YI4|F Chain F, Grapevine Fanleaf Virus
pdb|2YI4|G Chain G, Grapevine Fanleaf Virus
pdb|2YI4|H Chain H, Grapevine Fanleaf Virus
pdb|2YI4|I Chain I, Grapevine Fanleaf Virus
pdb|2YI4|J Chain J, Grapevine Fanleaf Virus
pdb|2YI4|K Chain K, Grapevine Fanleaf Virus
pdb|2YI4|L Chain L, Grapevine Fanleaf Virus
pdb|2YI4|M Chain M, Grapevine Fanleaf Virus
pdb|2YI4|N Chain N, Grapevine Fanleaf Virus
pdb|2YI4|O Chain O, Grapevine Fanleaf Virus
pdb|2YI4|P Chain P, Grapevine Fanleaf Virus
pdb|2YI4|Q Chain Q, Grapevine Fanleaf Virus
pdb|2YI4|R Chain R, Grapevine Fanleaf Virus
pdb|2YI4|S Chain S, Grapevine Fanleaf Virus
pdb|2YI4|T Chain T, Grapevine Fanleaf Virus
Length = 504
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 115 ATELTDEPTWIVDP--LDGTTNFVHGFPF--------VCISIGLTIGKIPIVGV--VYNP 162
AT +PT + DP +G F+ P S GLT+G++P+VG VYN
Sbjct: 159 ATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYN- 217
Query: 163 IMDELFTGVRGQGAFFNGK 181
+ L + V G G G+
Sbjct: 218 LNSTLVSCVLGMGGTVRGR 236
>pdb|2Y26|A Chain A, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|B Chain B, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|C Chain C, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|D Chain D, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|E Chain E, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|F Chain F, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|G Chain G, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|H Chain H, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|I Chain I, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|J Chain J, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|K Chain K, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|L Chain L, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|M Chain M, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|N Chain N, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|O Chain O, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|P Chain P, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|Q Chain Q, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|R Chain R, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|S Chain S, Transmission Defective Mutant Of Grapevine Fanleaf Virus
pdb|2Y26|T Chain T, Transmission Defective Mutant Of Grapevine Fanleaf Virus
Length = 504
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 115 ATELTDEPTWIVDP--LDGTTNFVHGFPF--------VCISIGLTIGKIPIVGV--VYNP 162
AT +PT + DP +G F+ P S GLT+G++P+VG VYN
Sbjct: 159 ATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYN- 217
Query: 163 IMDELFTGVRGQGAFFNGK 181
+ L + V G G G+
Sbjct: 218 LNSTLVSCVLGMGGTVRGR 236
>pdb|1A0E|A Chain A, Xylose Isomerase From Thermotoga Neapolitana
pdb|1A0E|D Chain D, Xylose Isomerase From Thermotoga Neapolitana
Length = 443
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 30 SLLFTKFFWILDSLAKFLDTAVDAAKRAG 58
+LL T + L++LA+FL AVD AKR G
Sbjct: 195 TLLNTDLGFELENLARFLRMAVDYAKRIG 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,521,027
Number of Sequences: 62578
Number of extensions: 332962
Number of successful extensions: 963
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 27
length of query: 306
length of database: 14,973,337
effective HSP length: 98
effective length of query: 208
effective length of database: 8,840,693
effective search space: 1838864144
effective search space used: 1838864144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)