Query 021905
Match_columns 305
No_of_seqs 363 out of 1692
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:05:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021905.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021905hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htm_A Speckle-type POZ protei 100.0 2.3E-31 8E-36 222.4 14.7 160 12-175 10-172 (172)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 1.5E-29 5.3E-34 224.9 15.6 168 20-193 15-186 (256)
3 3hqi_A Speckle-type POZ protei 100.0 2.7E-29 9.4E-34 229.4 16.6 160 12-175 150-312 (312)
4 3i3n_A Kelch-like protein 11; 100.0 6.5E-29 2.2E-33 223.6 12.6 160 20-182 16-186 (279)
5 4eoz_A Speckle-type POZ protei 100.0 3.3E-29 1.1E-33 203.6 6.3 142 12-157 1-145 (145)
6 3p57_P Histone acetyltransfera 99.9 8.3E-25 2.8E-29 167.7 6.0 75 215-305 10-84 (112)
7 2if5_A Zinc finger and BTB dom 99.9 2.6E-23 9E-28 163.6 10.0 108 20-131 9-119 (120)
8 2vkp_A BTB/POZ domain-containi 99.9 7.5E-23 2.6E-27 158.1 10.7 98 34-135 9-109 (109)
9 1r29_A B-cell lymphoma 6 prote 99.9 6.8E-23 2.3E-27 162.9 10.6 111 19-134 12-126 (127)
10 2z8h_A Transcription regulator 99.9 2.1E-23 7.1E-28 168.4 6.8 118 17-140 17-138 (138)
11 3t92_A Histone acetyltransfera 99.9 8.8E-23 3E-27 159.2 8.4 76 214-305 10-85 (121)
12 2ppi_A Gigaxonin; BTB domain, 99.9 1.4E-22 4.7E-27 164.8 8.9 108 21-131 32-143 (144)
13 3b84_A Zinc finger and BTB dom 99.9 1.1E-22 3.8E-27 160.0 6.8 106 21-134 9-117 (119)
14 2vpk_A Myoneurin; transcriptio 99.9 3.4E-22 1.2E-26 156.3 9.3 104 21-132 7-115 (116)
15 1buo_A POZ domain, protein (pr 99.9 3.7E-22 1.3E-26 157.3 9.1 106 20-134 12-120 (121)
16 2yy9_A Zinc finger and BTB dom 99.9 1.1E-22 3.9E-27 163.5 6.1 112 20-139 9-123 (135)
17 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.3E-21 4.3E-26 153.9 6.6 103 21-132 12-117 (119)
18 2ihc_A Transcription regulator 99.8 1.7E-22 6E-27 160.0 1.2 109 18-132 11-123 (124)
19 3ohu_A Transcription regulator 99.8 3.8E-22 1.3E-26 158.1 1.8 105 21-131 17-125 (125)
20 3ga1_A Nucleus accumbens-assoc 99.8 1.4E-21 4.7E-26 155.8 3.9 105 22-134 19-127 (129)
21 3fkc_A Transcriptional regulat 99.8 1.3E-19 4.6E-24 141.7 10.0 96 21-125 16-115 (116)
22 3m5b_A Zinc finger and BTB dom 99.8 3.7E-20 1.3E-24 145.5 5.1 87 34-133 31-117 (119)
23 2ast_A S-phase kinase-associat 99.5 3.4E-14 1.2E-18 116.9 10.6 108 36-146 3-140 (159)
24 4ajy_C Transcription elongatio 99.4 2.4E-12 8.3E-17 97.0 8.5 81 36-120 4-97 (97)
25 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 2E-11 6.9E-16 98.2 7.9 99 36-142 4-128 (141)
26 2p1m_A SKP1-like protein 1A; F 99.1 1.6E-11 5.5E-16 101.0 3.5 105 35-146 5-139 (160)
27 1hv2_A Elongin C, ELC1; protei 98.8 1.5E-08 5.2E-13 76.2 7.4 81 35-120 5-99 (99)
28 3v7d_A Suppressor of kinetocho 98.7 6.6E-08 2.2E-12 79.9 10.6 100 35-135 8-133 (169)
29 2fnj_C Transcription elongatio 98.7 2.4E-08 8.2E-13 74.7 6.2 81 36-120 3-96 (96)
30 1l3e_B P300 protein; protein-p 98.4 5E-07 1.7E-11 67.5 6.8 74 219-301 18-91 (101)
31 1vcb_B Protein (elongin C); tu 98.4 4.9E-07 1.7E-11 69.4 6.8 82 35-120 18-112 (112)
32 2eqx_A Kelch repeat and BTB do 98.4 2.3E-07 7.9E-12 70.5 4.9 59 132-193 5-63 (105)
33 3drz_A BTB/POZ domain-containi 98.3 1.6E-06 5.6E-11 66.0 8.4 96 35-133 7-106 (107)
34 3drx_A BTB/POZ domain-containi 97.3 0.00023 7.7E-09 59.9 4.5 97 35-134 13-113 (202)
35 3kvt_A Potassium channel prote 96.3 0.00069 2.3E-08 52.0 0.1 97 35-134 6-105 (115)
36 1s1g_A Potassium voltage-gated 95.6 0.0099 3.4E-07 46.0 3.9 93 34-132 13-110 (124)
37 1t1d_A Protein (potassium chan 95.4 0.0059 2E-07 45.4 2.0 86 36-124 3-90 (100)
38 1l3e_B P300 protein; protein-p 95.3 0.03 1E-06 41.5 5.4 50 218-284 48-97 (101)
39 2nz0_B Potassium voltage-gated 95.2 0.018 6.2E-07 45.5 4.2 85 33-123 34-121 (140)
40 1nn7_A Potassium channel KV4.2 94.2 0.0067 2.3E-07 45.6 -0.5 82 36-123 2-86 (105)
41 3t92_A Histone acetyltransfera 91.2 0.13 4.6E-06 39.4 3.1 41 260-304 18-60 (121)
42 2vkp_A BTB/POZ domain-containi 89.2 0.82 2.8E-05 33.5 6.0 32 135-166 77-108 (109)
43 1r29_A B-cell lymphoma 6 prote 83.1 2.7 9.3E-05 31.6 6.2 32 135-166 95-126 (127)
44 2yy9_A Zinc finger and BTB dom 81.6 1.4 4.9E-05 33.8 4.1 35 135-169 87-121 (135)
45 2q81_A MIZ-1 protein; BTB/POZ 79.2 4.6 0.00016 30.0 6.2 30 135-164 88-117 (119)
46 3b84_A Zinc finger and BTB dom 79.1 2.5 8.6E-05 31.5 4.7 32 135-166 86-117 (119)
47 2vpk_A Myoneurin; transcriptio 78.9 4.8 0.00017 29.6 6.2 30 135-164 86-115 (116)
48 1buo_A POZ domain, protein (pr 78.0 5.5 0.00019 29.6 6.3 31 135-165 89-119 (121)
49 2if5_A Zinc finger and BTB dom 77.0 6.7 0.00023 28.9 6.5 29 135-163 91-119 (120)
50 2r9r_B Paddle chimera voltage 74.7 1.7 5.8E-05 41.6 3.1 87 35-124 53-141 (514)
51 2z8h_A Transcription regulator 73.5 2.2 7.4E-05 32.8 2.9 33 135-167 101-133 (138)
52 2eqx_A Kelch repeat and BTB do 70.2 5.7 0.0002 29.0 4.5 30 106-135 11-40 (105)
53 2ppi_A Gigaxonin; BTB domain, 68.0 5.7 0.00019 30.7 4.3 29 135-163 115-143 (144)
54 3htm_A Speckle-type POZ protei 67.5 13 0.00043 29.1 6.4 32 135-166 100-131 (172)
55 4eoz_A Speckle-type POZ protei 65.5 7 0.00024 29.7 4.4 33 135-167 91-123 (145)
56 3m5b_A Zinc finger and BTB dom 63.5 12 0.0004 27.9 5.2 31 135-165 87-117 (119)
57 3ga1_A Nucleus accumbens-assoc 57.0 4 0.00014 30.8 1.4 32 135-166 96-127 (129)
58 3hve_A Gigaxonin; ubiquitin, c 52.3 22 0.00076 29.9 5.7 33 135-167 99-131 (256)
59 3p57_P Histone acetyltransfera 49.5 12 0.0004 28.0 2.9 32 260-295 17-50 (112)
60 3i3n_A Kelch-like protein 11; 49.4 25 0.00085 30.1 5.5 32 135-166 107-138 (279)
61 4g9q_A 4-carboxymuconolactone 49.1 1.1E+02 0.0036 26.4 9.4 98 58-156 18-127 (269)
62 3hqi_A Speckle-type POZ protei 42.4 40 0.0014 29.2 5.9 31 136-166 241-271 (312)
63 2ast_A S-phase kinase-associat 34.4 45 0.0015 26.0 4.4 33 135-167 94-126 (159)
64 1aba_A Glutaredoxin; electron 32.4 23 0.00078 24.2 2.1 15 275-289 13-27 (87)
65 2ihc_A Transcription regulator 31.5 5.3 0.00018 29.9 -1.6 30 135-164 94-123 (124)
66 2plx_B Peptide inhibitor; heli 30.5 57 0.0019 16.8 2.7 21 142-162 3-23 (26)
67 3msz_A Glutaredoxin 1; alpha-b 30.0 26 0.00089 23.5 2.0 16 274-289 12-27 (89)
68 1ego_A Glutaredoxin; electron 29.3 25 0.00086 23.4 1.8 15 274-288 9-23 (85)
69 1r7h_A NRDH-redoxin; thioredox 27.0 33 0.0011 22.1 2.0 16 274-289 9-24 (75)
70 3rhb_A ATGRXC5, glutaredoxin-C 26.7 31 0.0011 24.8 2.0 16 274-289 27-42 (113)
71 3qmx_A Glutaredoxin A, glutare 26.2 33 0.0011 24.4 2.0 17 273-289 23-39 (99)
72 2k8s_A Thioredoxin; dimer, str 25.9 34 0.0012 22.7 2.0 14 274-287 10-23 (80)
73 1fov_A Glutaredoxin 3, GRX3; a 24.3 38 0.0013 22.3 2.0 16 274-289 9-24 (82)
74 1h75_A Glutaredoxin-like prote 24.2 39 0.0013 22.3 2.0 16 274-289 9-24 (81)
75 3nzn_A Glutaredoxin; structura 23.7 44 0.0015 23.6 2.3 17 274-290 30-46 (103)
76 3ic4_A Glutaredoxin (GRX-1); s 23.6 40 0.0014 23.0 2.0 16 274-289 20-35 (92)
77 1fs1_B SKP1, cyclin A/CDK2-ass 23.6 1E+02 0.0034 23.5 4.6 33 135-167 89-121 (141)
78 1kte_A Thioltransferase; redox 22.0 43 0.0015 23.4 2.0 18 273-290 19-36 (105)
79 1ttz_A Conserved hypothetical 21.6 46 0.0016 23.0 2.0 15 274-288 9-23 (87)
80 3h8q_A Thioredoxin reductase 3 21.4 45 0.0015 24.1 2.0 17 273-289 24-40 (114)
81 1hcw_A BBA1; growth response p 20.4 34 0.0012 17.7 0.7 12 280-291 13-24 (26)
82 2fgx_A Putative thioredoxin; N 20.2 50 0.0017 24.1 2.0 14 274-287 38-51 (107)
No 1
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=222.44 Aligned_cols=160 Identities=24% Similarity=0.362 Sum_probs=142.9
Q ss_pred CCCCcCCCccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHH
Q 021905 12 GHPDVHSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVS 88 (305)
Q Consensus 12 ~~~~~~~p~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~ 88 (305)
..+.+.+|++++..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.| +....|.++++++++|+
T Consensus 10 ~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~f~ 87 (172)
T 3htm_A 10 TMNMVKVPECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVEPEVFK 87 (172)
T ss_dssp --CCSCCCCCCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCG-GGTTEEEECSSCHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHhCCCCcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccc-cCCCeEEecCCCHHHHH
Confidence 4467889999999999999885 4999999 89999999999999999999999999888 46789999999999999
Q ss_pred HHHhhhcCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhHHHHHHHHhhCCChHHHHHHHHHHHHhHH
Q 021905 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 168 (305)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf~ 168 (305)
.+|+|+|||.++++. +++.+++.+|++|+++.|++.|+++|.+.++++|++.++.+|..|+++.|.+.|.+||.+||.
T Consensus 88 ~~l~~~Yt~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 88 EMMCFIYTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp HHHHHHHHSCCTTGG--GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhCCCCCCcH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 999999999998875 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCchh
Q 021905 169 AVEKTEG 175 (305)
Q Consensus 169 ~v~~~~~ 175 (305)
++..+++
T Consensus 166 ~v~~s~~ 172 (172)
T 3htm_A 166 DVLETSG 172 (172)
T ss_dssp -------
T ss_pred HHHcCCC
Confidence 9987764
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=1.5e-29 Score=224.91 Aligned_cols=168 Identities=16% Similarity=0.252 Sum_probs=145.5
Q ss_pred ccchHhhHhhccCCC---CEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCC-CCCCCeEecCCCCHHHHHHHHhhhc
Q 021905 20 VTTLTKENAPAFYEP---DVQILTSGGLRIPVHASILVSASPVLENIIDRPRKH-RSSEKVIPILGVPCGAVSSFVGFLY 95 (305)
Q Consensus 20 ~s~l~~dl~~ll~~~---DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e-~~~~~~I~l~~v~~~~~~~~L~flY 95 (305)
.+.+..++.++++++ ||+|.+ +|++|+|||.||+++|+||++||.+++.+ .+....|.++++++++|+.+|+|+|
T Consensus 15 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Y 93 (256)
T 3hve_A 15 AARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIF 93 (256)
T ss_dssp HHHHHHHHHTCCC--CCCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhcc
Confidence 446788888888864 999999 89999999999999999999999998762 2467789999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhHHHHHHHHhhCCChHHHHHHHHHHHHhHHHHhCchh
Q 021905 96 TSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEG 175 (305)
Q Consensus 96 t~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~ 175 (305)
||.+.++. +++.+++.+|++|+++.|++.|+++|.+.++++|++.++.+|..|+++.|.+.|.+||.+||.++..+++
T Consensus 94 t~~~~i~~--~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~ 171 (256)
T 3hve_A 94 SGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEE 171 (256)
T ss_dssp HSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCCCcccH--hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999886 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccChHHHHHHHHH
Q 021905 176 WKFLQDHDPWLELQILQF 193 (305)
Q Consensus 176 f~~L~~~~p~l~~ell~~ 193 (305)
|..|+.+ .+.+++.+
T Consensus 172 f~~L~~~---~l~~lL~~ 186 (256)
T 3hve_A 172 FLELSPQ---KLKEVISL 186 (256)
T ss_dssp HHSSCHH---HHHHHHHC
T ss_pred hhcCCHH---HHHHHHcc
Confidence 9999755 66666653
No 3
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.96 E-value=2.7e-29 Score=229.45 Aligned_cols=160 Identities=24% Similarity=0.362 Sum_probs=139.8
Q ss_pred CCCCcCCCccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHH
Q 021905 12 GHPDVHSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVS 88 (305)
Q Consensus 12 ~~~~~~~p~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~ 88 (305)
..+.+.+|++++..++..++++ +||+|.+ +|++|+|||.||+++||||++||.+++.| +....|.|+++++++|+
T Consensus 150 ~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~f~ 227 (312)
T 3hqi_A 150 TMNMVKVPECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVEPEVFK 227 (312)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSSCHHHHH
T ss_pred cccccCCCCchHHHHHHHHHhCCCCCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccc-cCCceEEecCCCHHHHH
Confidence 3456889999999999998875 4999999 89999999999999999999999999888 57789999999999999
Q ss_pred HHHhhhcCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhHHHHHHHHhhCCChHHHHHHHHHHHHhHH
Q 021905 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 168 (305)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf~ 168 (305)
.+|+|+||+.+++.. +++.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|+++.|.+.|++||..||.
T Consensus 228 ~~L~~iYt~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 228 EMMCFIYTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp HHHHHHHHSCCTTHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHhhcCCCCCChH--HHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999999999998875 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCchh
Q 021905 169 AVEKTEG 175 (305)
Q Consensus 169 ~v~~~~~ 175 (305)
+|.++++
T Consensus 306 ~v~~s~g 312 (312)
T 3hqi_A 306 DVLETSG 312 (312)
T ss_dssp -------
T ss_pred HHhhCCC
Confidence 9988764
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=6.5e-29 Score=223.63 Aligned_cols=160 Identities=20% Similarity=0.302 Sum_probs=139.7
Q ss_pred ccchHhhHhhccCC---CCEEEEec--CCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecC------CCCHHHHH
Q 021905 20 VTTLTKENAPAFYE---PDVQILTS--GGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL------GVPCGAVS 88 (305)
Q Consensus 20 ~s~l~~dl~~ll~~---~DV~l~v~--~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~------~v~~~~~~ 88 (305)
++.+...+..++++ +||+|.++ +|++|+|||.||+++|+||++||.+++.| +....|.|+ ++++++|+
T Consensus 16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e-~~~~~i~l~~~~~~~~v~~~~f~ 94 (279)
T 3i3n_A 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSE-SRSGRVEMRKWSSEPGPEPDTVE 94 (279)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcc-ccCCeEEeccccccCCCCHHHHH
Confidence 34566677777664 59999994 39999999999999999999999999888 577889998 89999999
Q ss_pred HHHhhhcCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhHHHHHHHHhhCCChHHHHHHHHHHHHhHH
Q 021905 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFK 168 (305)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf~ 168 (305)
.+|+|+|||.+.++. +++.+++.+|++|+++.|+..|+++|.+.++++||+.++.+|..|+++.|.+.|.+||.+||.
T Consensus 95 ~ll~~~Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 172 (279)
T 3i3n_A 95 AVIEYMYTGRIRVST--GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFH 172 (279)
T ss_dssp HHHHHHHHSEEEEET--TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHH
T ss_pred HHHHhhCcCCcccCH--HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 999999999998876 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCchhhhhcccc
Q 021905 169 AVEKTEGWKFLQDH 182 (305)
Q Consensus 169 ~v~~~~~f~~L~~~ 182 (305)
++..+++|..|+.+
T Consensus 173 ~v~~~~~f~~L~~~ 186 (279)
T 3i3n_A 173 KVIQDEEFYTLPFH 186 (279)
T ss_dssp HHTTSSGGGGSCHH
T ss_pred HHhcCcChhcCCHH
Confidence 99999999998754
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.95 E-value=3.3e-29 Score=203.56 Aligned_cols=142 Identities=25% Similarity=0.399 Sum_probs=104.5
Q ss_pred CCCCcCCCccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHH
Q 021905 12 GHPDVHSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVS 88 (305)
Q Consensus 12 ~~~~~~~p~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~ 88 (305)
|.+.+++|++++..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.+ +....|.++++++++|+
T Consensus 1 ~s~~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~~~ 78 (145)
T 4eoz_A 1 GSNMVKVPECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVEPEVFK 78 (145)
T ss_dssp ----CCCCCCCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHH-HHHTEEEECSSCHHHHH
T ss_pred CCCcccCChHHHHHHHHHHHhCCCCcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcC-CCCceEEecCCCHHHHH
Confidence 4677899999999999999885 4999999 89999999999999999999999998877 46678999999999999
Q ss_pred HHHhhhcCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhHHHHHHHHhhCCChHHHH
Q 021905 89 SFVGFLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVDVLQLARLCDAPDLYL 157 (305)
Q Consensus 89 ~~L~flYt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~~~il~~A~~~~~~~L~~ 157 (305)
.+|+|+|||.++++. +++.+++.+|++|+++.|+..|+++|.+.++++|++.++.+|..|+++.|++
T Consensus 79 ~~l~~~Y~~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 79 EMMCFIYTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHHHHHSCCTTGG--GTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHhhccCccCCcH--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 999999999998775 8899999999999999999999999999999999999999999999998863
No 6
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=99.90 E-value=8.3e-25 Score=167.68 Aligned_cols=75 Identities=33% Similarity=0.889 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHhhhCCcccCCccCCCCCCCCCCCCCcchHHHHHHHHhhhhcCcccCCCChhHHHHHHHHHHHHhcCC
Q 021905 215 LQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCE 294 (305)
Q Consensus 215 ~~L~e~~~~l~h~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~h~~~c~~~~~~~c~~c~~~~~l~~~h~~~c~ 294 (305)
..+...+++|+|+++ |. +++|. +++|++||.||+|+++|+.|++|||++|++||+|+++||++|+
T Consensus 10 ~~iq~~l~~L~HA~~--C~------------~~~C~-~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~ 74 (112)
T 3p57_P 10 LSIQRCIQSLVHACQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQ 74 (112)
T ss_dssp HHHHHHHHHHHHHHH--CC------------CTTCC-CTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcc--CC------------CCCCC-ChhhHHHHHHHHHHHHccCCCCCCCcccHHHHHHHHHHHHHcC
Confidence 345667899999998 87 68999 9999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCC
Q 021905 295 QSDSCRVPLCR 305 (305)
Q Consensus 295 ~~~~c~~p~c~ 305 (305)
+++ |+||+|+
T Consensus 75 ~~~-C~VP~C~ 84 (112)
T 3p57_P 75 ENK-CPVPFCL 84 (112)
T ss_dssp STT-CCSTTHH
T ss_pred CCC-CCCCcCH
Confidence 965 9999995
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.89 E-value=2.6e-23 Score=163.59 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=95.0
Q ss_pred ccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcC
Q 021905 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (305)
Q Consensus 20 ~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt 96 (305)
++++..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.| +....|.++++++++|+.+|+|+||
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~~~~~f~~ll~~~Yt 86 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVV-DQQNVYEIDFVSAEALTALMDFAYT 86 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccc-cCCceEEeCCCCHHHHHHHHHHHcC
Confidence 44677777777775 4999999 89999999999999999999999999888 4778899999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 021905 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGL 131 (305)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L 131 (305)
|.++++. +++.+++.+|++|+++.|++.|+++|
T Consensus 87 ~~~~~~~--~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 87 ATLTVST--ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp SCCCCCG--GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9999886 89999999999999999999999987
No 8
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=7.5e-23 Score=158.09 Aligned_cols=98 Identities=21% Similarity=0.282 Sum_probs=85.8
Q ss_pred CCEEEEecCC---cEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHH
Q 021905 34 PDVQILTSGG---LRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (305)
Q Consensus 34 ~DV~l~v~~g---~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~ 110 (305)
+||+|.+++| +.|+|||.||+++|+||++||.+++.|. . ..|.++++++++|+.+|+|+|||.++++. +++.+
T Consensus 9 ~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~-~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~--~~~~~ 84 (109)
T 2vkp_A 9 ADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV-K-SEIHIPDVEPAAFLILLKYMYSDEIDLEA--DTVLA 84 (109)
T ss_dssp CCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT--TTHHH
T ss_pred ccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC-C-CeEEeCCCCHHHHHHHHHHHcCCCccCCH--HHHHH
Confidence 5999999553 8999999999999999999999998884 4 88999999999999999999999999886 89999
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcC
Q 021905 111 LLALSHVYSVPQLKQRCTKGLGERL 135 (305)
Q Consensus 111 Ll~lA~~~~v~~Lk~~c~~~L~~~l 135 (305)
++.+|++|+++.|++.|+++|.+.+
T Consensus 85 ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 85 TLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 9999999999999999999998753
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.88 E-value=6.8e-23 Score=162.87 Aligned_cols=111 Identities=17% Similarity=0.222 Sum_probs=101.0
Q ss_pred CccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEec-CCCCHHHHHHHHhhh
Q 021905 19 PVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPI-LGVPCGAVSSFVGFL 94 (305)
Q Consensus 19 p~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l-~~v~~~~~~~~L~fl 94 (305)
.++.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.| ....|.| +++++++|+.+|+|+
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e--~~~~i~l~~~~~~~~f~~ll~~~ 88 (127)
T 1r29_A 12 HASDVLLNLNRLRSRDILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKR--NLSVINLDPEINPEGFNILLDFM 88 (127)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTT--TCSEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccC--CCCEEEeCCCCCHHHHHHHHHHH
Confidence 345677888888776 4999999 89999999999999999999999999877 5778999 999999999999999
Q ss_pred cCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 021905 95 YTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (305)
Q Consensus 95 Yt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~ 134 (305)
|||.+.++. +++.+|+.+|++|+++.|++.|+++|.++
T Consensus 89 Ytg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 89 YTSRLNLRE--GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999886 89999999999999999999999998753
No 10
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.88 E-value=2.1e-23 Score=168.36 Aligned_cols=118 Identities=17% Similarity=0.180 Sum_probs=105.6
Q ss_pred CCCccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecC-CCCHHHHHHHHh
Q 021905 17 HSPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL-GVPCGAVSSFVG 92 (305)
Q Consensus 17 ~~p~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~-~v~~~~~~~~L~ 92 (305)
..+++.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.+ ...|.++ ++++++|+.+|+
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~v~~~~~~~lL~ 92 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDA---ELTVTLPEEVTVKGFEPLIQ 92 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCT---TEEEECCTTSCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCC---CceEEeCCCCCHHHHHHHHH
Confidence 34555788888888775 4999999 89999999999999999999999998765 3468995 999999999999
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhH
Q 021905 93 FLYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNV 140 (305)
Q Consensus 93 flYt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~ 140 (305)
|+|||.+.++. +++.+|+.+|++|+++.|++.|+++|.+.++.+|+
T Consensus 93 ~~Ytg~~~i~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sna 138 (138)
T 2z8h_A 93 FAYTAKLILSK--DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDSTS 138 (138)
T ss_dssp HHHHSCCCCCT--TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCCC
T ss_pred HhcCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccccC
Confidence 99999999886 88999999999999999999999999999988774
No 11
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=99.88 E-value=8.8e-23 Score=159.19 Aligned_cols=76 Identities=33% Similarity=0.838 Sum_probs=71.0
Q ss_pred hhhHHHHHHHHHHHhhhCCcccCCccCCCCCCCCCCCCCcchHHHHHHHHhhhhcCcccCCCChhHHHHHHHHHHHHhcC
Q 021905 214 YLQLSEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMC 293 (305)
Q Consensus 214 ~~~L~e~~~~l~h~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~h~~~c~~~~~~~c~~c~~~~~l~~~h~~~c 293 (305)
..++...|++|+|+++ |+ +++|. +|+|.+||.|++|+.+|+.|.+|||++|++||+||++|+++|
T Consensus 10 ~~~iq~~l~~L~HA~~--C~------------~~~C~-~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C 74 (121)
T 3t92_A 10 RLSIQRAIQSLVHAAQ--CR------------NANCS-LPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHC 74 (121)
T ss_dssp HHHHHHHHHHHHHHHH--CC------------CTTCC-CHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcc--Cc------------CCCCC-CchhHHHHHHHHHHHHccCCCCCCCCchHHHHHHHHHHHHhC
Confidence 4577889999999999 87 56799 999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCC
Q 021905 294 EQSDSCRVPLCR 305 (305)
Q Consensus 294 ~~~~~c~~p~c~ 305 (305)
++++ |+||+|+
T Consensus 75 ~~~~-C~VP~C~ 85 (121)
T 3t92_A 75 QENK-CPVPFCL 85 (121)
T ss_dssp CCTT-CCSTTHH
T ss_pred CCCC-CCCCccH
Confidence 9987 9999994
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=164.82 Aligned_cols=108 Identities=19% Similarity=0.294 Sum_probs=95.5
Q ss_pred cchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCC-CCCCeEecCCCCHHHHHHHHhhhcC
Q 021905 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHR-SSEKVIPILGVPCGAVSSFVGFLYT 96 (305)
Q Consensus 21 s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~-~~~~~I~l~~v~~~~~~~~L~flYt 96 (305)
+.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.+. +....|.|+++++++|+.+|+|+||
T Consensus 32 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYt 110 (144)
T 2ppi_A 32 ARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 110 (144)
T ss_dssp HHHHHHHHHTTC--CCCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhC
Confidence 3677888888886 4999999 899999999999999999999999887642 3577899999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 021905 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGL 131 (305)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L 131 (305)
|.+.++. +++.+|+.+|++|+++.|++.|+++|
T Consensus 111 g~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 111 GQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 9998886 89999999999999999999999876
No 13
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=159.96 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=93.1
Q ss_pred cchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCC
Q 021905 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTS 97 (305)
Q Consensus 21 s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~ 97 (305)
+.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+|||
T Consensus 9 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 9 VRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCCHHHHHHHHHHHcCC
Confidence 3566677777664 4999999 899999999999999999999999875 456999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 021905 98 RCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (305)
Q Consensus 98 ~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~ 134 (305)
.++++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 83 ~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 83 HLALTS--GNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCccCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 999886 88999999999999999999999988653
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=3.4e-22 Score=156.28 Aligned_cols=104 Identities=16% Similarity=0.208 Sum_probs=93.2
Q ss_pred cchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecC--CCCHHHHHHHHhhhc
Q 021905 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL--GVPCGAVSSFVGFLY 95 (305)
Q Consensus 21 s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~--~v~~~~~~~~L~flY 95 (305)
+.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|
T Consensus 7 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~~i~l~~~~~~~~~f~~ll~~~Y 80 (116)
T 2vpk_A 7 EHLLERLNKQREAGFLCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST-----SENNVFLDQSQVKADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC-----CCSCEECCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC-----CCCeEEeecCCCCHHHHHHHHHHHc
Confidence 4567777777764 5999999 89999999999999999999999986 24457777 999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 021905 96 TSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLG 132 (305)
Q Consensus 96 t~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~ 132 (305)
||.++++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 81 t~~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 81 TGTLNLDS--WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999876 899999999999999999999999985
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.86 E-value=3.7e-22 Score=157.33 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=95.3
Q ss_pred ccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcC
Q 021905 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (305)
Q Consensus 20 ~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt 96 (305)
++.+.+++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+||
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~~~~f~~ll~~~Yt 84 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLDFLSPKTFQQILEYAYT 84 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeCCCCHHHHHHHHHhhcC
Confidence 44677777777764 5999999 89999999999999999999999874 34699999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 021905 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (305)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~ 134 (305)
|.++++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 85 g~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 85 ATLQAKA--EDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp SCCCCCG--GGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999886 89999999999999999999999999764
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.86 E-value=1.1e-22 Score=163.48 Aligned_cols=112 Identities=15% Similarity=0.138 Sum_probs=93.3
Q ss_pred ccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcC
Q 021905 20 VTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT 96 (305)
Q Consensus 20 ~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt 96 (305)
.+.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+||
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~~~~f~~lL~fiYt 82 (135)
T 2yy9_A 9 SVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGFAEIFGLLLDFFYT 82 (135)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCCHHHHHHHHHHHhC
Confidence 34677788888776 4999999 899999999999999999999999875 34699999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhh
Q 021905 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDN 139 (305)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n 139 (305)
|.+.++. +++.+|+.+|++|+++.|++.|+++|.+.+...+
T Consensus 83 g~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 83 GHLALTS--GNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred CCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 9999886 8899999999999999999999999988765443
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.84 E-value=1.3e-21 Score=153.86 Aligned_cols=103 Identities=12% Similarity=0.195 Sum_probs=91.7
Q ss_pred cchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCC
Q 021905 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTS 97 (305)
Q Consensus 21 s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~ 97 (305)
+.+..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||
T Consensus 12 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~~~~f~~ll~~~Ytg 84 (119)
T 2q81_A 12 QHVLEQLNQQRQLGLLCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLDISNAAGLGQVLEFMYTA 84 (119)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGGGCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHHHcCC
Confidence 3556667766664 5999999 89999999999999999999999873 345888999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 021905 98 RCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLG 132 (305)
Q Consensus 98 ~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~ 132 (305)
.+.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 85 ~~~i~~--~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 85 KLSLSP--ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999886 789999999999999999999999985
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.84 E-value=1.7e-22 Score=159.96 Aligned_cols=109 Identities=19% Similarity=0.199 Sum_probs=95.0
Q ss_pred CCccchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEec-CCCCHHHHHHHHhh
Q 021905 18 SPVTTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPI-LGVPCGAVSSFVGF 93 (305)
Q Consensus 18 ~p~s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l-~~v~~~~~~~~L~f 93 (305)
.+++++..++.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.+ ...|.+ .++++++|+.+|+|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~i~l~~~v~~~~f~~lL~~ 86 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADG---ELNITLPEEVTVKGFEPLIQF 86 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCC---CceEeecCCcCHHHHHHHHHH
Confidence 4566788888888875 4999999 89999999999999999999999998765 256889 49999999999999
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 021905 94 LYTSRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLG 132 (305)
Q Consensus 94 lYt~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~ 132 (305)
+|||.++++. +++.+|+.+|++|+++.|++.|+++|.
T Consensus 87 iYtg~~~i~~--~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 87 AYTAKLILSK--ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHSEEEEET--TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred hcCCCcccCH--HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999998876 889999999999999999999998764
No 19
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=3.8e-22 Score=158.12 Aligned_cols=105 Identities=14% Similarity=0.189 Sum_probs=93.2
Q ss_pred cchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCC-CCHHHHHHHHhhhcC
Q 021905 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILG-VPCGAVSSFVGFLYT 96 (305)
Q Consensus 21 s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~-v~~~~~~~~L~flYt 96 (305)
+.+...+.+++++ +||+|.+ +|++|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+||
T Consensus 17 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~~~~~~f~~~l~~iYt 92 (125)
T 3ohu_A 17 TNILLGLNDQRKKDILCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKN---DLVVSLPEEVTARGFGPLLQFAYT 92 (125)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCS---SCEEECCTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCC---CcEEEeCCCCCHHHHHHHHHhHcC
Confidence 3566777777765 4999999 89999999999999999999999998765 56799998 999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 021905 97 SRCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGL 131 (305)
Q Consensus 97 ~~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L 131 (305)
|.+.++. +++.+++.+|++|+++.|++.|+++|
T Consensus 93 g~~~~~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 93 AKLLLSR--ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp SEEEECT--TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred CceEECH--HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9998876 89999999999999999999987653
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.4e-21 Score=155.83 Aligned_cols=105 Identities=13% Similarity=0.201 Sum_probs=87.2
Q ss_pred chHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecC-CCCHHHHHHHHhhhcCC
Q 021905 22 TLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPIL-GVPCGAVSSFVGFLYTS 97 (305)
Q Consensus 22 ~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~-~v~~~~~~~~L~flYt~ 97 (305)
.+...+.+++++ +||+|.+ +|++|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|||
T Consensus 19 ~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 19 SILECLNEQRLQGLYCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp HHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCC
Confidence 456666666665 4999999 89999999999999999999999886 35679996 99999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 021905 98 RCTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGER 134 (305)
Q Consensus 98 ~~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~ 134 (305)
.+.++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 93 ~~~i~~--~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 93 RLSMNV--GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp EEECCT--TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 998876 78999999999999999999999998764
No 21
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.80 E-value=1.3e-19 Score=141.66 Aligned_cols=96 Identities=13% Similarity=0.201 Sum_probs=84.7
Q ss_pred cchHhhHhhccCC---CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCC
Q 021905 21 TTLTKENAPAFYE---PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTS 97 (305)
Q Consensus 21 s~l~~dl~~ll~~---~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~ 97 (305)
+.+...+.+++++ +||+|.+ +|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||
T Consensus 16 ~~l~~~l~~~~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~~~~f~~~l~~~Ytg 88 (116)
T 3fkc_A 16 GSLLNSLNEQRGHGLFCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIRAEIFAEILNYIYSS 88 (116)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCCceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHhhcCC
Confidence 4566667766664 5999999 89999999999999999999999875 356999999999999999999999
Q ss_pred CC-CCcchHHHHHHHHHHHHhcCChHHHH
Q 021905 98 RC-TEEEMEKYGIHLLALSHVYSVPQLKQ 125 (305)
Q Consensus 98 ~~-~~~~~~~~~~~Ll~lA~~~~v~~Lk~ 125 (305)
.+ .++. +++.+++.+|++|+++.|++
T Consensus 89 ~~~~~~~--~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 89 KIVRVRS--DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CCCSCCH--HHHHHHHHHHHHHTCHHHHT
T ss_pred CcCCCCH--HHHHHHHHHHHHhCccccCc
Confidence 99 5665 89999999999999999874
No 22
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=3.7e-20 Score=145.53 Aligned_cols=87 Identities=18% Similarity=0.264 Sum_probs=79.3
Q ss_pred CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHHHHH
Q 021905 34 PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHLLA 113 (305)
Q Consensus 34 ~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~Ll~ 113 (305)
+||+|.+ +|++|+|||.||+++|+||++ ....|.++++++++|+.+|+|+|||.+.++. +++.+++.
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~--~~v~~ll~ 97 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGEGISPSTFAQLLNFVYGESVELQP--GELRPLQE 97 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCSSCCHHHHHHHHHHHTTCCEEECG--GGHHHHHH
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCH--HHHHHHHH
Confidence 5999999 899999999999999999974 2456999999999999999999999998876 89999999
Q ss_pred HHHhcCChHHHHHHHHHHhh
Q 021905 114 LSHVYSVPQLKQRCTKGLGE 133 (305)
Q Consensus 114 lA~~~~v~~Lk~~c~~~L~~ 133 (305)
+|++|+++.|++.|++++.+
T Consensus 98 aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 98 AARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHTTCHHHHHHHHHHC--
T ss_pred HHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999998765
No 23
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.53 E-value=3.4e-14 Score=116.94 Aligned_cols=108 Identities=9% Similarity=0.219 Sum_probs=84.9
Q ss_pred EEEEecCCcEEehhHHHHHhccHHHHHHhcC-CCCCCCCCCeEecCCCCHHHHHHHHhhhcCCC----------------
Q 021905 36 VQILTSGGLRIPVHASILVSASPVLENIIDR-PRKHRSSEKVIPILGVPCGAVSSFVGFLYTSR---------------- 98 (305)
Q Consensus 36 V~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~-~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~---------------- 98 (305)
|+|+++||+.|.+|+.+ |+.|+||++||.+ ++.+.+....|+|+++++.++..+++|+|+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 78887799999999999 8999999999998 55522456789999999999999999999977
Q ss_pred ----------CCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC---hhhHHHHHHH
Q 021905 99 ----------CTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLT---IDNVVDVLQL 146 (305)
Q Consensus 99 ----------~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~---~~n~~~il~~ 146 (305)
+.++ .+++.+|+.+|+++++..|.+.|..++...+. ++....++.+
T Consensus 82 ~~i~~wD~~F~~id--~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I 140 (159)
T 2ast_A 82 DDIPVWDQEFLKVD--QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 140 (159)
T ss_dssp CCCCHHHHHHTCSC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTC
T ss_pred hhhhHHHHHHHcCC--HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 3344 37899999999999999999999999877654 4444444433
No 24
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.35 E-value=2.4e-12 Score=96.99 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=66.0
Q ss_pred EEEEecCCcEEehhHHHHHhccHHHHHHhcC--CCCCCCCCCeEecCCCCHHHHHHHHhhhc-----C---CCCC---Cc
Q 021905 36 VQILTSGGLRIPVHASILVSASPVLENIIDR--PRKHRSSEKVIPILGVPCGAVSSFVGFLY-----T---SRCT---EE 102 (305)
Q Consensus 36 V~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~--~~~e~~~~~~I~l~~v~~~~~~~~L~flY-----t---~~~~---~~ 102 (305)
|+++.+||++|.+||.+ |..|+||++||.+ ++.| +....|+|+++++.+++.+++|+| + +.++ ++
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E-~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~ 81 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 81 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccc-cCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC
Confidence 67888899999999999 9999999999987 4555 457789999999999999999999 5 5555 55
Q ss_pred chHHHHHHHHHHHHhcCC
Q 021905 103 EMEKYGIHLLALSHVYSV 120 (305)
Q Consensus 103 ~~~~~~~~Ll~lA~~~~v 120 (305)
. +++.+|+.+|++++.
T Consensus 82 ~--~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 82 P--EIALELLMAANFLDC 97 (97)
T ss_dssp G--GGHHHHHHHHHHHTC
T ss_pred H--HHHHHHHHHHhhhCC
Confidence 4 889999999999863
No 25
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.23 E-value=2e-11 Score=98.24 Aligned_cols=99 Identities=10% Similarity=0.174 Sum_probs=81.0
Q ss_pred EEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCCC-----------------
Q 021905 36 VQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSR----------------- 98 (305)
Q Consensus 36 V~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~----------------- 98 (305)
|+|+.+||++|.+|+.+ |..|++|+.||.+.- ...|++++++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-----CSSEECTTCCHHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 78888899999999998 799999999998631 3469999999999999999999754
Q ss_pred ---------CCCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCChhhHHH
Q 021905 99 ---------CTEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERLTIDNVVD 142 (305)
Q Consensus 99 ---------~~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l~~~n~~~ 142 (305)
+.++ .+++.+|+.+|+++++.+|.+.|.+++...+...+.-.
T Consensus 78 ~i~~wD~~F~~vd--~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 78 DIPVWDQEFLKVD--QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp ---HHHHHHTCSC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhhHHHHHHHhCC--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 2223 37888899999999999999998888887765555433
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.14 E-value=1.6e-11 Score=100.96 Aligned_cols=105 Identities=9% Similarity=0.206 Sum_probs=56.6
Q ss_pred CEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCCCC---------------
Q 021905 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRC--------------- 99 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~~--------------- 99 (305)
-|+|+.+||+.|.+|+.+ |..|++|+.||.+.. ....|+|++++..+++.+++|+|+..-
T Consensus 5 ~v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 5 KIVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC----VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp ---CCC---------CHH-HHTCTTTC----------------CCTTSCHHHHHHHHHC---------------------
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC----CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 477777799999999998 789999999998752 234699999999999999999998652
Q ss_pred ------------CCcchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---ChhhHHHHHHH
Q 021905 100 ------------TEEEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERL---TIDNVVDVLQL 146 (305)
Q Consensus 100 ------------~~~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l---~~~n~~~il~~ 146 (305)
.++ .+++.+|+.+|+++++..|.++|..++...+ +++....++.+
T Consensus 80 ~~~i~~wD~~Fl~vd--~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I 139 (160)
T 2p1m_A 80 DDDLKAWDADFMKID--QATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNI 139 (160)
T ss_dssp -----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTC
T ss_pred cchhhHHHHHHHcCC--HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 122 3678889999999999999999999988887 55554444443
No 27
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.78 E-value=1.5e-08 Score=76.24 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=67.1
Q ss_pred CEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCCC--------------CC
Q 021905 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSR--------------CT 100 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~--------------~~ 100 (305)
-|+|..+||++|.+++.+ |..|.+++.||..++ + +....|+|++++..+++.+++|+|... +.
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e-~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R-ESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T-TCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c-cCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 478888899999999997 799999999998865 3 345679999999999999999998632 22
Q ss_pred CcchHHHHHHHHHHHHhcCC
Q 021905 101 EEEMEKYGIHLLALSHVYSV 120 (305)
Q Consensus 101 ~~~~~~~~~~Ll~lA~~~~v 120 (305)
++ .+.+.+|+.+|+++++
T Consensus 82 vd--~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IP--TEMSLELLLAADYLSI 99 (99)
T ss_dssp CC--HHHHHHHHHHHHHHCC
T ss_pred CC--HHHHHHHHHHHHHhCc
Confidence 33 3789999999998875
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.73 E-value=6.6e-08 Score=79.93 Aligned_cols=100 Identities=16% Similarity=0.242 Sum_probs=74.2
Q ss_pred CEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCCC---CCCCeEecCCCCHHHHHHHHhhhcCCCCC-----------
Q 021905 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRPRKHR---SSEKVIPILGVPCGAVSSFVGFLYTSRCT----------- 100 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e~---~~~~~I~l~~v~~~~~~~~L~flYt~~~~----------- 100 (305)
-|+|+.+||..|.+++.+ |..|.+++.|+.....+. .....|+|++++..++..+++|++...-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 588888899999999998 688999999998642210 12367999999999999999998753311
Q ss_pred ----C--------cchHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 021905 101 ----E--------EEMEKYGIHLLALSHVYSVPQLKQRCTKGLGERL 135 (305)
Q Consensus 101 ----~--------~~~~~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l 135 (305)
+ ....+.+.+|+.+|++++|.+|.++|...+...+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 0 0113678888888888888888888888775543
No 29
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.69 E-value=2.4e-08 Score=74.74 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=63.5
Q ss_pred EEEEecCCcEEehhHHHHHhccHHHHHHhcCC--CCCCCCCCeEecCCCCHHHHHHHHhhhcCCC-----------CCCc
Q 021905 36 VQILTSGGLRIPVHASILVSASPVLENIIDRP--RKHRSSEKVIPILGVPCGAVSSFVGFLYTSR-----------CTEE 102 (305)
Q Consensus 36 V~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~--~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~-----------~~~~ 102 (305)
|+++.+||.+|.+++.+ |..|++++.|+... +.| +....|++++++..+++.+++|+|... +.++
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e-~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCccc-ccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccC
Confidence 67888899999999997 79999999999863 234 345689999999999999999997632 2333
Q ss_pred chHHHHHHHHHHHHhcCC
Q 021905 103 EMEKYGIHLLALSHVYSV 120 (305)
Q Consensus 103 ~~~~~~~~Ll~lA~~~~v 120 (305)
. +.+.+|+.+|+++++
T Consensus 81 ~--~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 P--EIALELLMAANFLDC 96 (96)
T ss_dssp T--TTHHHHHHHHHHHTC
T ss_pred H--HHHHHHHHHHHHhCc
Confidence 3 789999999998875
No 30
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=98.42 E-value=5e-07 Score=67.47 Aligned_cols=74 Identities=19% Similarity=0.475 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhhCCcccCCccCCCCCCCCCCCCCcchHHHHHHHHhhhhcCcccCCCChhHHHHHHHHHHHHhcCCCCCC
Q 021905 219 EAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQLLRLHSSMCEQSDS 298 (305)
Q Consensus 219 e~~~~l~h~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~h~~~c~~~~~~~c~~c~~~~~l~~~h~~~c~~~~~ 298 (305)
..+-+|.|+.+ |...- ..++....|. .+.|..||.|+.|..+|+....-.-++|...++|+ .|.+.|.+.+
T Consensus 18 qqL~lL~HA~k--C~~~e----~~~g~~~~C~-lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii-~H~k~C~~~~- 88 (101)
T 1l3e_B 18 QQLVLLLHAHK--CQRRE----QANGEVRQCN-LPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQII-SHWKNCTRHD- 88 (101)
T ss_dssp HHHHHHHHHHH--HHHHH----TTTSSCCCCS-CHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHH-HHHHHCCSSC-
T ss_pred HHHHHHHHHHH--cCCcc----ccCCcCCCCC-CCccHHHHHHHHHHHHccCCCCCCCCCCHHHHHHH-HHHHhCCCCC-
Confidence 34578999988 87321 0112236899 99999999999999999875555668899999998 5999999988
Q ss_pred CcC
Q 021905 299 CRV 301 (305)
Q Consensus 299 c~~ 301 (305)
|+|
T Consensus 89 CpV 91 (101)
T 1l3e_B 89 CPV 91 (101)
T ss_dssp CTT
T ss_pred CCc
Confidence 977
No 31
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.41 E-value=4.9e-07 Score=69.43 Aligned_cols=82 Identities=12% Similarity=0.203 Sum_probs=63.9
Q ss_pred CEEEEecCCcEEehhHHHHHhccHHHHHHhcCC--CCCCCCCCeEecCCCCHHHHHHHHhhhcCCC-----------CCC
Q 021905 35 DVQILTSGGLRIPVHASILVSASPVLENIIDRP--RKHRSSEKVIPILGVPCGAVSSFVGFLYTSR-----------CTE 101 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~--~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~-----------~~~ 101 (305)
-|+|+.+||.+|.+.+.+ |..|..++.|+... +.+ +....|+|++++..+++.+++|+|... +.+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e-~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCccc-ccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 588888899999999995 68999999999853 233 344689999999999999999996522 223
Q ss_pred cchHHHHHHHHHHHHhcCC
Q 021905 102 EEMEKYGIHLLALSHVYSV 120 (305)
Q Consensus 102 ~~~~~~~~~Ll~lA~~~~v 120 (305)
+ .+.+.+|+.+|+++++
T Consensus 96 d--~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 A--PEIALELLMAANFLDC 112 (112)
T ss_dssp C--HHHHHHHHHHHHHHTC
T ss_pred C--HHHHHHHHHHHHHhCc
Confidence 3 3789999999999875
No 32
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=2.3e-07 Score=70.47 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=52.7
Q ss_pred hhcCChhhHHHHHHHHhhCCChHHHHHHHHHHHHhHHHHhCchhhhhccccChHHHHHHHHH
Q 021905 132 GERLTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKAVEKTEGWKFLQDHDPWLELQILQF 193 (305)
Q Consensus 132 ~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf~~v~~~~~f~~L~~~~p~l~~ell~~ 193 (305)
.+.++++||+.++.+|+.|+++.|.+.|.+||.+||.++.++++|..|+.+ .+.+++.+
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~---~L~~lL~s 63 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHR---LLTDIISD 63 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHH---HHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHH---HHHHHHcC
Confidence 456899999999999999999999999999999999999999999999865 55666554
No 33
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.35 E-value=1.6e-06 Score=65.97 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=75.6
Q ss_pred CEEEEecCCcEEehhHHHHHhcc-HHHHHHhcCCCC---CCCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHH
Q 021905 35 DVQILTSGGLRIPVHASILVSAS-PVLENIIDRPRK---HRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S-~yF~~mf~~~~~---e~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~ 110 (305)
-|+|.| +|+.|...+..|+... .+|.+||.+... .......+-| |-++..|+.+|+|+.+|.+..... -....
T Consensus 7 ~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~-~~~~~ 83 (107)
T 3drz_A 7 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEG 83 (107)
T ss_dssp EEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT-SCHHH
T ss_pred EEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC-CCHHH
Confidence 478888 9999999999998765 488999986521 1123345655 789999999999999999876531 23467
Q ss_pred HHHHHHhcCChHHHHHHHHHHhh
Q 021905 111 LLALSHVYSVPQLKQRCTKGLGE 133 (305)
Q Consensus 111 Ll~lA~~~~v~~Lk~~c~~~L~~ 133 (305)
++.-|++|+++.|.+.|++.|..
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 89999999999999999988764
No 34
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.26 E-value=0.00023 Score=59.85 Aligned_cols=97 Identities=12% Similarity=0.123 Sum_probs=73.7
Q ss_pred CEEEEecCCcEEehhHHHHHhcc-HHHHHHhcCCCC---CCCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHH
Q 021905 35 DVQILTSGGLRIPVHASILVSAS-PVLENIIDRPRK---HRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S-~yF~~mf~~~~~---e~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~ 110 (305)
=|+|.| +|+.|...+..|.... .+|..||.+... .......+-| |-++..|..+|+|+-+|.+..... -....
T Consensus 13 ~V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~-~~~~~ 89 (202)
T 3drx_A 13 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEG 89 (202)
T ss_dssp EEEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT-SCHHH
T ss_pred EEEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC-CCHHH
Confidence 477888 9999999999997654 378899876521 1112344555 779999999999999999876542 22356
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhc
Q 021905 111 LLALSHVYSVPQLKQRCTKGLGER 134 (305)
Q Consensus 111 Ll~lA~~~~v~~Lk~~c~~~L~~~ 134 (305)
++.-|++|+|+.|.+.|.+.|...
T Consensus 90 l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHHHHHH
Confidence 889999999999999999888653
No 35
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.29 E-value=0.00069 Score=51.95 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=66.9
Q ss_pred CEEEEecCCcEEehhHHHHHhcc-HHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHHHHH
Q 021905 35 DVQILTSGGLRIPVHASILVSAS-PVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHLLA 113 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S-~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~Ll~ 113 (305)
=|+|.| ||+.|...+..|.... ..|.+|+.+...-....+.+-| |=++..|..+|+|+-+|.+..... .....++.
T Consensus 6 ~V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~-~~~~~~~~ 82 (115)
T 3kvt_A 6 RVIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD-VCGPLFEE 82 (115)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS-SCHHHHHH
T ss_pred EEEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc-ccHHHHHH
Confidence 478888 9999999999997653 2455666543111123455655 679999999999999999866541 23568889
Q ss_pred HHHhcCChHHHH--HHHHHHhhc
Q 021905 114 LSHVYSVPQLKQ--RCTKGLGER 134 (305)
Q Consensus 114 lA~~~~v~~Lk~--~c~~~L~~~ 134 (305)
-|.+|+|+...- -|...+.+.
T Consensus 83 Ea~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 83 ELEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp HHHHHTCCGGGBCGGGSHHHHSC
T ss_pred HHHHhCCChHHHHHHHHHHHHhc
Confidence 999999987532 244444443
No 36
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.60 E-value=0.0099 Score=46.03 Aligned_cols=93 Identities=10% Similarity=0.056 Sum_probs=63.8
Q ss_pred CCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCC---CCCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHH
Q 021905 34 PDVQILTSGGLRIPVHASILVSASPVLENIIDRPRK---HRSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIH 110 (305)
Q Consensus 34 ~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~---e~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~ 110 (305)
.=|+|.| +|+.|..-+..|.... .+||....+ .....+.+-| |=++..|+.+|+|+-+|.+..... ..+..
T Consensus 13 ~~V~LNV-GG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNV-SGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECISA 86 (124)
T ss_dssp CEEEEEE-TTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT-SCHHH
T ss_pred CEEEEEe-CCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC-cCHHH
Confidence 3578888 9999999999996542 234433110 0012344555 679999999999999999876541 24678
Q ss_pred HHHHHHhcCChHHH--HHHHHHHh
Q 021905 111 LLALSHVYSVPQLK--QRCTKGLG 132 (305)
Q Consensus 111 Ll~lA~~~~v~~Lk--~~c~~~L~ 132 (305)
++.-|++|+|+.+. .-|...+.
T Consensus 87 l~~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 87 YDDELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp HHHHHHHTTCCGGGBCHHHHHHHH
T ss_pred HHHHHHHcCCChHHHHHHHHHHHH
Confidence 89999999998863 34444433
No 37
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.41 E-value=0.0059 Score=45.44 Aligned_cols=86 Identities=15% Similarity=0.041 Sum_probs=59.3
Q ss_pred EEEEecCCcEEehhHHHHHhcc-HHHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcC-CCCCCcchHHHHHHHHH
Q 021905 36 VQILTSGGLRIPVHASILVSAS-PVLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT-SRCTEEEMEKYGIHLLA 113 (305)
Q Consensus 36 V~l~v~~g~~~~aHk~vLaa~S-~yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt-~~~~~~~~~~~~~~Ll~ 113 (305)
|+|.| +|+.|...+..|...- ..+.+|+.....-....+.+-| |=++..|+.+|+|+-+ |.+..... ..+..++.
T Consensus 3 v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~-~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN-VPLDVFSE 79 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT-SCHHHHHH
T ss_pred EEEEE-CCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC-CCHHHHHH
Confidence 67888 9999999999996542 1233333221000113445666 7799999999999998 88865432 24678899
Q ss_pred HHHhcCChHHH
Q 021905 114 LSHVYSVPQLK 124 (305)
Q Consensus 114 lA~~~~v~~Lk 124 (305)
-|++|+++.+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998754
No 38
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=95.29 E-value=0.03 Score=41.51 Aligned_cols=50 Identities=24% Similarity=0.595 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhhhCCcccCCccCCCCCCCCCCCCCcchHHHHHHHHhhhhcCcccCCCChhHHHHHH
Q 021905 218 SEAMECLEHICTEGCTSVGPYEVGPTKNRGPCSKFATCQGLQLLIRHFATCKKRVNGGCLRCKRMWQ 284 (305)
Q Consensus 218 ~e~~~~l~h~~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~h~~~c~~~~~~~c~~c~~~~~ 284 (305)
.++-+.|.|+-+ |... ..|. ++.|...+.|+.|...|+. ..|++|.-++.
T Consensus 48 ~~mK~ll~Hm~~--C~~g-----------~~C~-~~~C~sSr~ii~H~k~C~~---~~CpVC~pvk~ 97 (101)
T 1l3e_B 48 RTMKNVLNHMTH--CQSG-----------KSCQ-VAHCASSRQIISHWKNCTR---HDCPVCLPLKN 97 (101)
T ss_dssp HHHHHHHHHHTT--CCSC-----------SSSS-CHHHHHHHHHHHHHHHCCS---SCCTTHHHHHC
T ss_pred HHHHHHHHHHHH--ccCC-----------CCCC-CCCCHHHHHHHHHHHhCCC---CCCCcCHHHHh
Confidence 356688999966 8721 5799 9999999999999999976 59999987664
No 39
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.18 E-value=0.018 Score=45.50 Aligned_cols=85 Identities=9% Similarity=0.052 Sum_probs=61.0
Q ss_pred CCCEEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCC---CCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHH
Q 021905 33 EPDVQILTSGGLRIPVHASILVSASPVLENIIDRPRKH---RSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGI 109 (305)
Q Consensus 33 ~~DV~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~ 109 (305)
+.=|+|.| +|+.|...+..|.... .+||....+. ....+.+-| |=++..|+.+|+|+-+|.+..... ..+.
T Consensus 34 ~~~V~LNV-GG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~ 107 (140)
T 2nz0_B 34 DELIVLNV-SGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECIS 107 (140)
T ss_dssp CCEEEEEE-TTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT-SCHH
T ss_pred CCEEEEEE-CCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC-cCHH
Confidence 34688888 9999999999997543 2344432110 013345555 679999999999999999876531 2477
Q ss_pred HHHHHHHhcCChHH
Q 021905 110 HLLALSHVYSVPQL 123 (305)
Q Consensus 110 ~Ll~lA~~~~v~~L 123 (305)
.++.-|++|+|+.+
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 88999999999886
No 40
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.20 E-value=0.0067 Score=45.55 Aligned_cols=82 Identities=6% Similarity=0.039 Sum_probs=58.6
Q ss_pred EEEEecCCcEEehhHHHHHhccHHHHHHhcCCCCC---CCCCCeEecCCCCHHHHHHHHhhhcCCCCCCcchHHHHHHHH
Q 021905 36 VQILTSGGLRIPVHASILVSASPVLENIIDRPRKH---RSSEKVIPILGVPCGAVSSFVGFLYTSRCTEEEMEKYGIHLL 112 (305)
Q Consensus 36 V~l~v~~g~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~~~~I~l~~v~~~~~~~~L~flYt~~~~~~~~~~~~~~Ll 112 (305)
|+|.| +|+.|...+..|.... .+||....+. ....+.+-| |=++..|+.+|+|+-+|.+..... ..+..++
T Consensus 2 V~LNV-GG~~f~t~~~TL~~~p---~s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~-~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNV-SGTRFQTWQDTLERYP---DTLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH-ECISAYD 75 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSC---SSSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT-SCHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCC---CccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC-cCHHHHH
Confidence 78899 9999999999997643 2344331110 012344555 669999999999999999876542 2367889
Q ss_pred HHHHhcCChHH
Q 021905 113 ALSHVYSVPQL 123 (305)
Q Consensus 113 ~lA~~~~v~~L 123 (305)
.-|++|+++.+
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999875
No 41
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=91.24 E-value=0.13 Score=39.36 Aligned_cols=41 Identities=27% Similarity=0.753 Sum_probs=33.2
Q ss_pred HHHHhhhhcCcccCCCCh--hHHHHHHHHHHHHhcCCCCCCCcCCCC
Q 021905 260 LLIRHFATCKKRVNGGCL--RCKRMWQLLRLHSSMCEQSDSCRVPLC 304 (305)
Q Consensus 260 ~~~~h~~~c~~~~~~~c~--~c~~~~~l~~~h~~~c~~~~~c~~p~c 304 (305)
.++.|+..|. +++|. .|..|-.|++ |...|.....|..|.|
T Consensus 18 ~~L~HA~~C~---~~~C~~p~C~~mK~ll~-H~~~C~~r~~~~c~~C 60 (121)
T 3t92_A 18 QSLVHAAQCR---NANCSLPSCQKMKRVVQ-HTKGCKRKTNGGCPIC 60 (121)
T ss_dssp HHHHHHHHCC---CTTCCCHHHHHHHHHHH-HHHHCSSTTTTTCHHH
T ss_pred HHHHHHccCc---CCCCCCchhHHHHHHHH-HHHHccCCCCCCCCch
Confidence 4678999995 45675 7999999999 9999987545888876
No 42
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=89.23 E-value=0.82 Score=33.45 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
++.+|+..++.+|..++.+.|.+.|.+|+.++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999876
No 43
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=83.11 E-value=2.7 Score=31.57 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=29.6
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999764
No 44
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=81.58 E-value=1.4 Score=33.79 Aligned_cols=35 Identities=23% Similarity=0.207 Sum_probs=28.9
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHhHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRFKA 169 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf~~ 169 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.+++..
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 77899999999999999999999999999988754
No 45
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=79.21 E-value=4.6 Score=29.96 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=28.1
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 164 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~ 164 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 778999999999999999999999999874
No 46
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=79.11 E-value=2.5 Score=31.47 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=27.7
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 67899999999999999999999999998765
No 47
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=78.92 E-value=4.8 Score=29.58 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 164 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~ 164 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678899999999999999999999999874
No 48
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=78.04 E-value=5.5 Score=29.57 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=29.0
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAAS 165 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~ 165 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.+
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999875
No 49
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=77.04 E-value=6.7 Score=28.93 Aligned_cols=29 Identities=34% Similarity=0.529 Sum_probs=27.3
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 163 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i 163 (305)
++.+|+..++..|..++.+.|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 67899999999999999999999999986
No 50
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=74.71 E-value=1.7 Score=41.55 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=57.1
Q ss_pred CEEEEecCCcEEehhHHHHHhccH-HHHHHhcCCCCCCCCCCeEecCCCCHHHHHHHHhhhcC-CCCCCcchHHHHHHHH
Q 021905 35 DVQILTSGGLRIPVHASILVSASP-VLENIIDRPRKHRSSEKVIPILGVPCGAVSSFVGFLYT-SRCTEEEMEKYGIHLL 112 (305)
Q Consensus 35 DV~l~v~~g~~~~aHk~vLaa~S~-yF~~mf~~~~~e~~~~~~I~l~~v~~~~~~~~L~flYt-~~~~~~~~~~~~~~Ll 112 (305)
=|+|.| +|+.|...+..|...-. .+..++.....-....+.+-+ |=++..|+.+|.|+.+ |.+..... -....+.
T Consensus 53 ~v~lNV-gG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~-~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINI-SGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN-VPLDIFS 129 (514)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT-SCHHHHH
T ss_pred EEEEEe-CCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc-ccHHHHH
Confidence 477888 99999999999954321 111111111000023345555 7799999999999999 88865431 2345678
Q ss_pred HHHHhcCChHHH
Q 021905 113 ALSHVYSVPQLK 124 (305)
Q Consensus 113 ~lA~~~~v~~Lk 124 (305)
.=|++|+++.+.
T Consensus 130 ~E~~f~~i~~~~ 141 (514)
T 2r9r_B 130 EEIRFYELGEEA 141 (514)
T ss_dssp HHHHHTTCCHHH
T ss_pred HHHHhcCCCHHH
Confidence 889999998754
No 51
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=73.47 E-value=2.2 Score=32.79 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=30.6
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHhH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf 167 (305)
++.+|+..++..|..++.+.|.+.|.+|+..++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 778999999999999999999999999998764
No 52
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.17 E-value=5.7 Score=28.97 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 021905 106 KYGIHLLALSHVYSVPQLKQRCTKGLGERL 135 (305)
Q Consensus 106 ~~~~~Ll~lA~~~~v~~Lk~~c~~~L~~~l 135 (305)
+|...++.+|+.|+++.|+..|..|+..++
T Consensus 11 ~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 11 GNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 789999999999999999999999998763
No 53
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=67.96 E-value=5.7 Score=30.69 Aligned_cols=29 Identities=34% Similarity=0.406 Sum_probs=27.0
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLA 163 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i 163 (305)
++.+|+.+++..|..++.+.|.+.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 67899999999999999999999998875
No 54
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=67.54 E-value=13 Score=29.15 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=29.4
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
++.+++..++.+|..++.+.|.+.|.+++.++
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 131 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALCSN 131 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999964
No 55
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=65.54 E-value=7 Score=29.72 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=26.4
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHhH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf 167 (305)
++.+++..++..|..++.+.|...|.+++.+++
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999998754
No 56
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=63.54 E-value=12 Score=27.87 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAAS 165 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~ 165 (305)
++.+|+.+++..|..++.+.|.+.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 7789999999999999999999999988654
No 57
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=57.02 E-value=4 Score=30.79 Aligned_cols=32 Identities=3% Similarity=0.045 Sum_probs=23.2
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
++.+|+..++..|..++.+.|.+.|.+|+.+.
T Consensus 96 i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 96 MNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp CCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 78899999999999999999999999998764
No 58
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=52.35 E-value=22 Score=29.91 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=29.6
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHhH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf 167 (305)
++.+|+.+++..|..++.+.|.+.|.+|+..++
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 778999999999999999999999999998653
No 59
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=49.45 E-value=12 Score=28.02 Aligned_cols=32 Identities=22% Similarity=0.674 Sum_probs=23.6
Q ss_pred HHHHhhhhcCcccCCCCh--hHHHHHHHHHHHHhcCCC
Q 021905 260 LLIRHFATCKKRVNGGCL--RCKRMWQLLRLHSSMCEQ 295 (305)
Q Consensus 260 ~~~~h~~~c~~~~~~~c~--~c~~~~~l~~~h~~~c~~ 295 (305)
.++.|+..|.. +.|. .|.+|-.|+ -|...|..
T Consensus 17 ~~L~HA~~C~~---~~C~~~~C~~mK~ll-~H~~~C~~ 50 (112)
T 3p57_P 17 QSLVHACQCRN---ANCSLPSCQKMKRVV-QHTKGCKR 50 (112)
T ss_dssp HHHHHHHHCCC---TTCCCTTHHHHHHHH-TCTTCC--
T ss_pred HHHHHHccCCC---CCCCChhhHHHHHHH-HHHHHccC
Confidence 67889999974 4565 899998875 47888986
No 60
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=49.37 E-value=25 Score=30.06 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=29.8
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
++.+|+..++..|..++.+.|.+.|.+|+.++
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 67889999999999999999999999999864
No 61
>4g9q_A 4-carboxymuconolactone decarboxylase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.77A {Sinorhizobium meliloti}
Probab=49.12 E-value=1.1e+02 Score=26.40 Aligned_cols=98 Identities=10% Similarity=0.081 Sum_probs=53.5
Q ss_pred HHHHHHhcCCCCCCCCCCeEec--------CCCCHHHHHHHHhhhcCCCCCCcch---HHHHHHHHHHHHhcCChHHHHH
Q 021905 58 PVLENIIDRPRKHRSSEKVIPI--------LGVPCGAVSSFVGFLYTSRCTEEEM---EKYGIHLLALSHVYSVPQLKQR 126 (305)
Q Consensus 58 ~yF~~mf~~~~~e~~~~~~I~l--------~~v~~~~~~~~L~flYt~~~~~~~~---~~~~~~Ll~lA~~~~v~~Lk~~ 126 (305)
-||..|+...... .++..... .++.|+--+...+|+|.+-+..+.. ...+..|-.++-.-..+.|+..
T Consensus 18 ~~~~~~~~~~~~~-aq~~~~~~~~~~pd~l~~~aP~l~~~~~e~~fG~vw~r~~Ld~k~R~Litla~l~A~g~~~~l~~H 96 (269)
T 4g9q_A 18 LYFQSMMTTSNAG-AQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVTIAALIARGEAPALTYY 96 (269)
T ss_dssp ---------------CCSCGGGSSSCHHHHHTTCHHHHHHHHHTTTTTGGGCTTSCHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred hHHHHHHHHHHHH-HhCCCcccccCCHHHHHhhCcHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4888888765222 23333333 3556666667888999876654322 2444444444444566788888
Q ss_pred HHHHHhhcCChhhHHHHH-HHHhhCCChHHH
Q 021905 127 CTKGLGERLTIDNVVDVL-QLARLCDAPDLY 156 (305)
Q Consensus 127 c~~~L~~~l~~~n~~~il-~~A~~~~~~~L~ 156 (305)
....+...++++...+++ +.+...+.|...
T Consensus 97 ~~~Al~~G~T~~EI~Evl~q~~~Y~G~P~a~ 127 (269)
T 4g9q_A 97 ADQALENGVKPSEISETITHLAYYSGWGKAM 127 (269)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhccHHHHH
Confidence 888888899999988874 556666666543
No 62
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=42.42 E-value=40 Score=29.18 Aligned_cols=31 Identities=19% Similarity=0.102 Sum_probs=28.1
Q ss_pred ChhhHHHHHHHHhhCCChHHHHHHHHHHHHh
Q 021905 136 TIDNVVDVLQLARLCDAPDLYLRCMKLAASR 166 (305)
Q Consensus 136 ~~~n~~~il~~A~~~~~~~L~~~c~~~i~~n 166 (305)
+.+++.+++.+|+.|+.+.|...|.+++.++
T Consensus 241 ~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 271 (312)
T 3hqi_A 241 LDKMADDLLAAADKYALERLKVMCEDALCSN 271 (312)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHcc
Confidence 4578999999999999999999999999864
No 63
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=34.43 E-value=45 Score=26.04 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=30.8
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHhH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf 167 (305)
++.+++.+++..|...+...|.+.|.++++..+
T Consensus 94 id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i 126 (159)
T 2ast_A 94 VDQGTLFELILAANYLDIKGLLDVTCKTVANMI 126 (159)
T ss_dssp SCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999998754
No 64
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=32.36 E-value=23 Score=24.22 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=13.3
Q ss_pred CChhHHHHHHHHHHH
Q 021905 275 GCLRCKRMWQLLRLH 289 (305)
Q Consensus 275 ~c~~c~~~~~l~~~h 289 (305)
+|+.|++..++|.-+
T Consensus 13 ~Cp~C~~ak~~L~~~ 27 (87)
T 1aba_A 13 KCGPCDNAKRLLTVK 27 (87)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHc
Confidence 899999999998765
No 65
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=31.53 E-value=5.3 Score=29.88 Aligned_cols=30 Identities=17% Similarity=0.332 Sum_probs=26.4
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAA 164 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~ 164 (305)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 678899999999999999999999988763
No 66
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=30.49 E-value=57 Score=16.83 Aligned_cols=21 Identities=29% Similarity=0.555 Sum_probs=16.9
Q ss_pred HHHHHHhhCCChHHHHHHHHH
Q 021905 142 DVLQLARLCDAPDLYLRCMKL 162 (305)
Q Consensus 142 ~il~~A~~~~~~~L~~~c~~~ 162 (305)
.++-+|..+..++|...|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 466788889999999888763
No 67
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=29.96 E-value=26 Score=23.53 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=13.6
Q ss_pred CCChhHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLH 289 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h 289 (305)
-+|+.|+++..+|.-+
T Consensus 12 ~~Cp~C~~~~~~L~~~ 27 (89)
T 3msz_A 12 NGCPYCVWAKQWFEEN 27 (89)
T ss_dssp TTCHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHc
Confidence 4899999999998754
No 68
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=29.27 E-value=25 Score=23.43 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=12.6
Q ss_pred CCChhHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRL 288 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~ 288 (305)
.+|+.|+++..+|.-
T Consensus 9 ~~C~~C~~~~~~l~~ 23 (85)
T 1ego_A 9 SGCPYCVRAKDLAEK 23 (85)
T ss_dssp TTSTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 489999999988764
No 69
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=26.96 E-value=33 Score=22.10 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=13.2
Q ss_pred CCChhHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLH 289 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h 289 (305)
.+|+.|+++..+|.-+
T Consensus 9 ~~C~~C~~~~~~l~~~ 24 (75)
T 1r7h_A 9 PACVQCTATKKALDRA 24 (75)
T ss_dssp TTCHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHc
Confidence 4899999999988643
No 70
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=26.71 E-value=31 Score=24.79 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=13.7
Q ss_pred CCChhHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLH 289 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h 289 (305)
.+|+.|+++..+|.-+
T Consensus 27 ~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 27 TWCSYCTEVKTLFKRL 42 (113)
T ss_dssp TTCHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHc
Confidence 4899999999998754
No 71
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=26.24 E-value=33 Score=24.37 Aligned_cols=17 Identities=29% Similarity=0.472 Sum_probs=14.1
Q ss_pred CCCChhHHHHHHHHHHH
Q 021905 273 NGGCLRCKRMWQLLRLH 289 (305)
Q Consensus 273 ~~~c~~c~~~~~l~~~h 289 (305)
.-+|+.|+++..+|.-+
T Consensus 23 ~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 23 WSTCPFCMRALALLKRK 39 (99)
T ss_dssp CTTCHHHHHHHHHHHHH
T ss_pred cCCChhHHHHHHHHHHC
Confidence 34899999999998754
No 72
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=25.87 E-value=34 Score=22.70 Aligned_cols=14 Identities=29% Similarity=0.515 Sum_probs=11.5
Q ss_pred CCChhHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLR 287 (305)
Q Consensus 274 ~~c~~c~~~~~l~~ 287 (305)
-+|+.|+++...+.
T Consensus 10 ~~C~~C~~~~~~l~ 23 (80)
T 2k8s_A 10 AGCPVCVSAEQAVA 23 (80)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHH
Confidence 48999999999554
No 73
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=24.29 E-value=38 Score=22.26 Aligned_cols=16 Identities=31% Similarity=0.505 Sum_probs=13.4
Q ss_pred CCChhHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLH 289 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h 289 (305)
.+|+.|+++..+|.-+
T Consensus 9 ~~C~~C~~~~~~l~~~ 24 (82)
T 1fov_A 9 ETCPYCHRAKALLSSK 24 (82)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHC
Confidence 4899999999988754
No 74
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=24.24 E-value=39 Score=22.25 Aligned_cols=16 Identities=13% Similarity=0.497 Sum_probs=13.2
Q ss_pred CCChhHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLH 289 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h 289 (305)
.+|+.|+++..+|.-+
T Consensus 9 ~~C~~C~~~~~~l~~~ 24 (81)
T 1h75_A 9 NDCVQCHATKRAMENR 24 (81)
T ss_dssp TTCHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHC
Confidence 4899999999988743
No 75
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=23.73 E-value=44 Score=23.58 Aligned_cols=17 Identities=29% Similarity=0.552 Sum_probs=13.8
Q ss_pred CCChhHHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLHS 290 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h~ 290 (305)
-+|+.|+++..+|.-+.
T Consensus 30 ~~Cp~C~~ak~~L~~~~ 46 (103)
T 3nzn_A 30 STCVWCKKTKKLLTDLG 46 (103)
T ss_dssp SSCHHHHHHHHHHHHHT
T ss_pred CCCchHHHHHHHHHHcC
Confidence 48999999999987653
No 76
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=23.64 E-value=40 Score=22.95 Aligned_cols=16 Identities=31% Similarity=0.746 Sum_probs=13.4
Q ss_pred CCChhHHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRLH 289 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~h 289 (305)
.+|+.|+++..+|.-+
T Consensus 20 ~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 20 STCPHCKRTLEFLKRE 35 (92)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHc
Confidence 4899999999988754
No 77
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=23.58 E-value=1e+02 Score=23.47 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=30.8
Q ss_pred CChhhHHHHHHHHhhCCChHHHHHHHHHHHHhH
Q 021905 135 LTIDNVVDVLQLARLCDAPDLYLRCMKLAASRF 167 (305)
Q Consensus 135 l~~~n~~~il~~A~~~~~~~L~~~c~~~i~~nf 167 (305)
++.+++.+++..|...+...|.+.|.++++...
T Consensus 89 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~i 121 (141)
T 1fs1_B 89 VDQGTLFELILAANYLDIKGLLDVTCKTVANMI 121 (141)
T ss_dssp SCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 889999999999999999999999999998754
No 78
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=21.95 E-value=43 Score=23.37 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=14.4
Q ss_pred CCCChhHHHHHHHHHHHH
Q 021905 273 NGGCLRCKRMWQLLRLHS 290 (305)
Q Consensus 273 ~~~c~~c~~~~~l~~~h~ 290 (305)
..+|+.|+++..+|.-+.
T Consensus 19 ~~~C~~C~~~~~~L~~~~ 36 (105)
T 1kte_A 19 KPTCPFCRKTQELLSQLP 36 (105)
T ss_dssp CSSCHHHHHHHHHHHHSC
T ss_pred cCCCHhHHHHHHHHHHcC
Confidence 358999999999987543
No 79
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=21.56 E-value=46 Score=23.04 Aligned_cols=15 Identities=20% Similarity=0.448 Sum_probs=12.9
Q ss_pred CCChhHHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLRL 288 (305)
Q Consensus 274 ~~c~~c~~~~~l~~~ 288 (305)
.+|+.|+++..+|.-
T Consensus 9 ~~C~~C~~~~~~L~~ 23 (87)
T 1ttz_A 9 DDCHLCDQAVEALAQ 23 (87)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHH
Confidence 589999999999864
No 80
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=21.43 E-value=45 Score=24.13 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=14.1
Q ss_pred CCCChhHHHHHHHHHHH
Q 021905 273 NGGCLRCKRMWQLLRLH 289 (305)
Q Consensus 273 ~~~c~~c~~~~~l~~~h 289 (305)
..+||.|+++..+|.-+
T Consensus 24 ~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 24 KSYCPHSTRVKELFSSL 40 (114)
T ss_dssp CTTCHHHHHHHHHHHHT
T ss_pred cCCCCcHHHHHHHHHHc
Confidence 35899999999998754
No 81
>1hcw_A BBA1; growth response protein, de novo protein design, supersecondary motif; HET: PYA; NMR {} SCOP: k.14.1.1 PDB: 1t8j_A*
Probab=20.41 E-value=34 Score=17.68 Aligned_cols=12 Identities=42% Similarity=0.717 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHh
Q 021905 280 KRMWQLLRLHSS 291 (305)
Q Consensus 280 ~~~~~l~~~h~~ 291 (305)
..+..|||||+-
T Consensus 13 delakllrlhag 24 (26)
T 1hcw_A 13 DELAKLLRLHAG 24 (26)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHHhcc
Confidence 456778888874
No 82
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=20.20 E-value=50 Score=24.08 Aligned_cols=14 Identities=43% Similarity=0.838 Sum_probs=12.4
Q ss_pred CCChhHHHHHHHHH
Q 021905 274 GGCLRCKRMWQLLR 287 (305)
Q Consensus 274 ~~c~~c~~~~~l~~ 287 (305)
.+|+.|+++..+|.
T Consensus 38 ~~C~~C~~a~~~L~ 51 (107)
T 2fgx_A 38 EGCHLCEEMIASLR 51 (107)
T ss_dssp SSCHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHH
Confidence 48999999999886
Done!