BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021907
(305 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/299 (78%), Positives = 267/299 (89%), Gaps = 2/299 (0%)
Query: 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKIC 61
E LD II RLL+ + R G K VQL+E+EIR LC SREIFL QP LLEL AP+KIC
Sbjct: 5 EKLNLDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKIC 62
Query: 62 GDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
GDIHGQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
Sbjct: 63 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 122 GNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLIN 181
GNHECASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +
Sbjct: 123 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQS 182
Query: 182 LDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMD 241
++QIR++ RPTDVPD GLLCDLLWSDP +DV+GWG NDRGVS+TFG + VA+FL K+D+D
Sbjct: 183 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLD 242
Query: 242 LVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300
L+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP DK
Sbjct: 243 LICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 301
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 231/300 (77%), Positives = 272/300 (90%), Gaps = 2/300 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
+D +I+RLL+ + R G K VQ++E+E+R LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 11 VDSLITRLLEVRGCRPG--KIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIH 68
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY+DLLRLFEYGGFPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 69 GQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 128
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 129 CASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 188
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD+GLLCDLLWSDP +DV+GWG NDRGVS+TFG D V++FL ++D+DL+CR
Sbjct: 189 RRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICR 248
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKKPRFS 305
AHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+G MMSVD++LMCSFQILKP++KK ++
Sbjct: 249 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQ 308
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/299 (78%), Positives = 267/299 (89%), Gaps = 2/299 (0%)
Query: 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKIC 61
E LD II RLL+ + R G K VQL+E+EIR LC SREIFL QP LLEL AP+KIC
Sbjct: 6 EKLNLDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKIC 63
Query: 62 GDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
GDIHGQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
Sbjct: 64 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 123
Query: 122 GNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLIN 181
GNHECASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +
Sbjct: 124 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQS 183
Query: 182 LDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMD 241
++QIR++ RPTDVPD GLLCDLLWSDP +DV+GWG NDRGVS+TFG + VA+FL K+D+D
Sbjct: 184 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLD 243
Query: 242 LVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300
L+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP DK
Sbjct: 244 LICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 302
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 499 bits (1286), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/295 (79%), Positives = 266/295 (90%), Gaps = 2/295 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
LD II RLL+ + R G K VQL+E+EIR LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD GLLCDLLWSDP +DV+GWG NDRGVS+TFG + VA+FL K+D+DL+CR
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300
AHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP DK
Sbjct: 246 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 300
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 499 bits (1286), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/295 (79%), Positives = 266/295 (90%), Gaps = 2/295 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
LD II RLL+ + R G K VQL+E+EIR LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD GLLCDLLWSDP +DV+GWG NDRGVS+TFG + VA+FL K+D+DL+CR
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300
AHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP DK
Sbjct: 246 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 300
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/298 (78%), Positives = 266/298 (89%), Gaps = 2/298 (0%)
Query: 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKIC 61
E LD II RLL+ + R G K VQL+E+EIR LC SREIFL QP LLEL AP+KIC
Sbjct: 5 EKLNLDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKIC 62
Query: 62 GDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
GDIHGQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
Sbjct: 63 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 122 GNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLIN 181
GNHECASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +
Sbjct: 123 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQS 182
Query: 182 LDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMD 241
++QIR++ RPTDVPD GLLCDLLWSDP +DV+GWG NDRGVS+TFG + VA+FL K+D+D
Sbjct: 183 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLD 242
Query: 242 LVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTD 299
L+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP D
Sbjct: 243 LICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/296 (78%), Positives = 265/296 (89%), Gaps = 2/296 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
+D II RLL+ + + G K VQL E+EIR LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 9 IDSIIQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 66
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 67 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 127 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD GLLCDLLWSDP +DV GWG NDRGVS+TFG + VA+FL K+D+DL+CR
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 246
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
AHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP +KK
Sbjct: 247 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/296 (78%), Positives = 265/296 (89%), Gaps = 2/296 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
+D II RLL+ + + G K VQL E+EIR LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 15 IDSIIQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 72
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 73 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 132
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 133 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 192
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD GLLCDLLWSDP +DV GWG NDRGVS+TFG + VA+FL K+D+DL+CR
Sbjct: 193 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 252
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
AHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP +KK
Sbjct: 253 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 308
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/294 (79%), Positives = 265/294 (90%), Gaps = 2/294 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
LD II RLL+ + R G K VQL+E+EIR LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD GLLCDLLWSDP +DV+GWG NDRGVS+TFG + VA+FL K+D+DL+CR
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTD 299
AHQVVEDGYEFFA RQLVT+FSAPNYCGEFDN+GAMMSVD++LMCSFQILKP D
Sbjct: 246 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 299
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 480 bits (1236), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/292 (77%), Positives = 259/292 (88%), Gaps = 2/292 (0%)
Query: 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIH 65
+D II RLL+ + + G K VQL E+EIR LC SREIFL QP LLEL AP+KICGDIH
Sbjct: 4 IDSIIQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 61
Query: 66 GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
GQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE
Sbjct: 62 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 121
Query: 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQI 185
CASINRIYGFYDECKRR+N++LWK FTDCFNCLP+AA++D+KI C HGGLSPDL +++QI
Sbjct: 122 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 181
Query: 186 RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245
R++ RPTDVPD GLLCDLLWSDP +DV GWG NDRGVS+TFG + VA+FL K+D+DL+CR
Sbjct: 182 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 241
Query: 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKP 297
AHQVVEDGYEFFA RQLVT+FSAPNY ++N+GAMMSVD++LMCSFQILKP
Sbjct: 242 AHQVVEDGYEFFAKRQLVTLFSAPNYLDVYNNAGAMMSVDETLMCSFQILKP 293
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 297 bits (761), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 186/275 (67%), Gaps = 2/275 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 23 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 82
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 83 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 142
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 143 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 202
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 203 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 261
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
SAPNYC N A+M +DD+L SF P ++
Sbjct: 262 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 296
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 297 bits (760), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 186/275 (67%), Gaps = 2/275 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
SAPNYC N A+M +DD+L SF P ++
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 297 bits (760), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 186/275 (67%), Gaps = 2/275 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
SAPNYC N A+M +DD+L SF P ++
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 185/277 (66%), Gaps = 2/277 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 82 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKKPR 303
SAPNYC N A+M +DD+L SF P R
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPHVTR 297
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 296 bits (759), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 185/274 (67%), Gaps = 2/274 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 21 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 80
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYVDRG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 81 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 140
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 141 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 200
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 201 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 259
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300
SAPNYC N A+M +DD+L SF P +
Sbjct: 260 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPR 293
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 296 bits (757), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 186/275 (67%), Gaps = 2/275 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYV+RG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 82 FMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
SAPNYC N A+M +DD+L SF P ++
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 186/275 (67%), Gaps = 2/275 (0%)
Query: 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYL 87
QLSES+++ LC ++EI ++ N+ E+ P+ +CGD+HGQ+ DL+ LF GG P NYL
Sbjct: 22 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 81
Query: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVR 146
F+GDYV+RG S+ET+ LL+A K++Y E +LRGNHE I ++YGFYDEC R++ N
Sbjct: 82 FMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 141
Query: 147 LWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206
+WK FTD F+ LP+ AL+D +I C+HGGLSP + LD IR L R +VP G +CDLLWS
Sbjct: 142 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 201
Query: 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF 266
DP D GWG++ RG YTFG D F N + LV RAHQ+V +GY + DR +VTIF
Sbjct: 202 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 260
Query: 267 SAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301
SAPNYC N A+M +DD+L SF P ++
Sbjct: 261 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L ES + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 52 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 172 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 291
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 236 bits (603), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L ES + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 52 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 172 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 291
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L ES + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 39 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 98
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 99 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 158
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 159 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 218
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 219 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 278
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 279 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 316
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L ES + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 55 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 114
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 115 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 174
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 175 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 234
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 235 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 294
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 295 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 332
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L ES + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 32 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 91
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 92 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 151
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 152 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 211
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 212 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 271
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 272 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 309
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L ES + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 33 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 92
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 93 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 152
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 153 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 212
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 213 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 272
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 273 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 310
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 169/278 (60%), Gaps = 13/278 (4%)
Query: 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84
K+ +L E+ + T I Q+ NLL++ AP+ +CGDIHGQ+ DL++LFE GG P
Sbjct: 35 KEGRLEETVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 94
Query: 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN 144
YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +++
Sbjct: 95 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 154
Query: 145 VRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLL 204
R++ D F+CLP+AAL++ + LC+HGGLSP++ LD IRKL R + P G +CD+L
Sbjct: 155 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 214
Query: 205 WSDPGRDVKGWGMND-------RGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFF 257
WSDP D + RG SY + V EFL N++ + RAH+ + GY +
Sbjct: 215 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMY 274
Query: 258 ADRQ------LVTIFSAPNYCGEFDNSGAMMSVDDSLM 289
Q L+TIFSAPNY ++N A++ ++++M
Sbjct: 275 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 312
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 3/238 (1%)
Query: 52 LELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN-YLFLGDYVDRGKQSLETICLLLAYK 110
L+ I +CGD HGQ+ DLL +FE G P + N Y+F GD+VDRG S+E I L +K
Sbjct: 209 LKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFK 268
Query: 111 IKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILC 170
+ YP++F LLRGNHE ++N+IYGF E K ++ +++++F++ F LP+A I+ K+L
Sbjct: 269 LLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLI 328
Query: 171 MHGGL-SPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPD 229
MHGGL S D + LD IRK+ R PDSG +CDLLWSDP + G ++ RGVS FGPD
Sbjct: 329 MHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDP-QPQNGRSISKRGVSCQFGPD 387
Query: 230 TVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDS 287
FL +N++D + R+H+V +GYE + VT+FSAPNYC + N + + + S
Sbjct: 388 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGS 445
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 3/238 (1%)
Query: 52 LELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN-YLFLGDYVDRGKQSLETICLLLAYK 110
L+ I +CGD HGQ+ DLL +FE G P + N Y+F GD+VDRG S+E I L +K
Sbjct: 65 LKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFK 124
Query: 111 IKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILC 170
+ YP++F LLRGNHE ++N+IYGF E K ++ +++++F++ F LP+A I+ K+L
Sbjct: 125 LLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLI 184
Query: 171 MHGGL-SPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPD 229
MHGGL S D + LD IRK+ R PDSG +CDLLWSDP + G ++ RGVS FGPD
Sbjct: 185 MHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDP-QPQNGRSISKRGVSCQFGPD 243
Query: 230 TVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDS 287
FL +N++D + R+H+V +GYE + VT+FSAPNYC + N + + + S
Sbjct: 244 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGS 301
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 3/238 (1%)
Query: 52 LELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN-YLFLGDYVDRGKQSLETICLLLAYK 110
L+ I +CGD HGQ+ DLL +FE G P + N Y+F GD+VDRG S+E I L +K
Sbjct: 56 LKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFK 115
Query: 111 IKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILC 170
+ YP++F LLRGNHE ++N+IYGF E K ++ +++++F++ F LP+A I+ K+L
Sbjct: 116 LLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLI 175
Query: 171 MHGGL-SPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPD 229
MHGGL S D + LD IRK+ R PDSG +CDLLWSDP + G ++ RGVS FGPD
Sbjct: 176 MHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDP-QPQNGRSISKRGVSCQFGPD 234
Query: 230 TVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDS 287
FL +N++D + R+H+V +GYE + VT+FSAPNYC + N + + + S
Sbjct: 235 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGS 292
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 148/264 (56%), Gaps = 9/264 (3%)
Query: 29 LSESEIRMLCTVSREIFLQQPNLLELA------APIKICGDIHGQYSDLLRLF-EYGGFP 81
L + + + + + +F Q+P+ +EL I +CGD HGQ+ D+L LF ++G
Sbjct: 31 LPKKYVAAIISHADTLFRQEPSXVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVG 90
Query: 82 PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 141
PK YLF GD+VDRG S E L KI +P NFFL RGNHE + N+IYGF DECK
Sbjct: 91 PKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNXNKIYGFEDECKY 150
Query: 142 RFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPD-LINLDQIRKLPRPTDVPDSGLL 200
+++ R++ F F LP+A LI++ L HGGL D L + + R P G
Sbjct: 151 KYSQRIFNXFAQSFESLPLATLINNDYLVXHGGLPSDPSATLSDFKNIDRFAQPPRDGAF 210
Query: 201 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADR 260
+LLW+DP ++ G G + RG+ + FGPD FL N + + R+H++ G +F
Sbjct: 211 XELLWADP-QEANGXGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRXGGVQFEQKG 269
Query: 261 QLVTIFSAPNYCGEFDNSGAMMSV 284
+L T+FSAPNYC N G ++ V
Sbjct: 270 KLXTVFSAPNYCDSQGNLGGVIHV 293
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 58 IKICGDIHGQYSDLLRLFEYGGFPPKANYLF-LGDYVDRGKQSLETICLLLAYKIKYPEN 116
I + GD+HG Y++L+ + GF K + L +GD VDRG +++E CL L I +P
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVE--CLEL---ITFPW- 68
Query: 117 FFLLRGNHECASINRIYGFYDECKRRFNVRLW 148
F +RGNHE I D R NV W
Sbjct: 69 FRAVRGNHEQMMI-------DGLSERGNVNHW 93
>pdb|2DFJ|A Chain A, Crystal Structure Of The Diadenosine Tetraphosphate
Hydrolase From Shigella Flexneri 2a
pdb|2DFJ|B Chain B, Crystal Structure Of The Diadenosine Tetraphosphate
Hydrolase From Shigella Flexneri 2a
Length = 280
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 60 ICGDIHGQYSDLLRLFEYGGFPPKANYLFL-GDYVDRGKQSLETICLLLAYKIKYPENFF 118
+ GD+HG Y +L+ L F P + L+L GD V RG SL+ +L Y ++
Sbjct: 5 LIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLD----VLRYVKSLGDSVR 60
Query: 119 LLRGNHECASINRIYGFY-DECKRRFNVRLWKIFTD-CFNCL---PVAALIDDKILCM-H 172
L+ GNH+ + G ++ K R L D N L P+ + ++K L M H
Sbjct: 61 LVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAH 120
Query: 173 GGLSP 177
G++P
Sbjct: 121 AGITP 125
>pdb|2Z72|A Chain A, New Structure Of Cold-Active Protein Tyrosine Phosphatase
At 1.1 Angstrom
Length = 342
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 72/190 (37%), Gaps = 25/190 (13%)
Query: 38 CTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEY-------GGFP-PKANYLFL 89
+S EI P+ + D+HGQY LL L + G + + + +
Sbjct: 53 TKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMT 112
Query: 90 GDYVDRGKQSLETICLLLAYKIKYPEN---FFLLRGNHE----CASINRIYGFYDECKRR 142
GD DRG Q E + + + + LL GNHE + ++ YD
Sbjct: 113 GDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTL 172
Query: 143 FNV---RLWKIFTDCFNCLPVAALI--DDKILCMHGGLSPDLIN----LDQIRKLPRP-T 192
N +L+ T+ L I + +L MHGG+S + I+ LD+ L R
Sbjct: 173 INRPYNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANV 232
Query: 193 DVPDSGLLCD 202
D L D
Sbjct: 233 DASKKSLKAD 242
>pdb|2ZBM|A Chain A, Crystal Structure Of I115m Mutant Cold-Active Protein
Tyrosine Phosphatase
Length = 336
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 72/190 (37%), Gaps = 25/190 (13%)
Query: 38 CTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEY-------GGFP-PKANYLFL 89
+S EI P+ + D+HGQY LL L + G + + + +
Sbjct: 53 TKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMT 112
Query: 90 GDYVDRGKQSLETICLLLAYKIKYPEN---FFLLRGNHE----CASINRIYGFYDECKRR 142
GD DRG Q E + + + + LL GNHE + ++ YD
Sbjct: 113 GDMFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTL 172
Query: 143 FNV---RLWKIFTDCFNCLPVAALI--DDKILCMHGGLSPDLIN----LDQIRKLPRP-T 192
N +L+ T+ L I + +L MHGG+S + I+ LD+ L R
Sbjct: 173 INRPYNKLYGADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANV 232
Query: 193 DVPDSGLLCD 202
D L D
Sbjct: 233 DASKKSLKAD 242
>pdb|1V73|A Chain A, Crystal Structure Of Cold-Active Protein-Tyrosine
Phosphatase Of A Psychrophile Shewanella Sp
Length = 342
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 72/190 (37%), Gaps = 25/190 (13%)
Query: 38 CTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEY-------GGFP-PKANYLFL 89
+S EI P+ + D+HGQY LL L + G + + + +
Sbjct: 53 TKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMT 112
Query: 90 GDYVDRGKQSLETICLLLAYKIKYPEN---FFLLRGNHE----CASINRIYGFYDECKRR 142
GD DRG Q E + + + + LL GNHE + ++ YD
Sbjct: 113 GDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTL 172
Query: 143 FNV---RLWKIFTDCFNCLPVAALI--DDKILCMHGGLSPDLIN----LDQIRKLPRP-T 192
N +L+ T+ L I + +L MHGG+S + I+ LD+ L R
Sbjct: 173 INRPYNKLYGADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANV 232
Query: 193 DVPDSGLLCD 202
D L D
Sbjct: 233 DASKKSLKAD 242
>pdb|3CZ8|A Chain A, Crystal Structure Of Putative Sporulation-Specific
Glycosylase Ydhd From Bacillus Subtilis
pdb|3CZ8|B Chain B, Crystal Structure Of Putative Sporulation-Specific
Glycosylase Ydhd From Bacillus Subtilis
Length = 319
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 3 PAVLDDIISRLLDFKNGRGGGGKQV---QLSESEIRMLCTVSREIF--LQQPN-LLELAA 56
P ++++ + D + RG GG + Q+S ++ + R++ LQ +L +A
Sbjct: 93 PTARTNLVNNIYDLVSTRGYGGVTIDFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAV 152
Query: 57 PIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDY 92
P K +I LR ++YGG NY+F+ Y
Sbjct: 153 PAKTSDNI-----PWLRGYDYGGIGAVVNYMFIMAY 183
>pdb|1SLT|A Chain A, Structure Of S-Lectin, A Developmentally Regulated
Vertebrate Beta-Galactoside Binding Protein
pdb|1SLT|B Chain B, Structure Of S-Lectin, A Developmentally Regulated
Vertebrate Beta-Galactoside Binding Protein
Length = 134
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 210 RDVKGWGMNDRGVSYTFGPDTVAEFLLK-NDMDLVCRAHQVVEDGYEF 256
+D WG R ++ F P +V E + N DL + + DGYEF
Sbjct: 63 KDAGAWGAEQRESAFPFQPGSVVEVXISFNQTDLTIK----LPDGYEF 106
>pdb|1SLA|A Chain A, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLA|B Chain B, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|A Chain A, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|B Chain B, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|C Chain C, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|D Chain D, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|A Chain A, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|B Chain B, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|C Chain C, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|D Chain D, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
Length = 134
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 210 RDVKGWGMNDRGVSYTFGPDTVAEFLLK-NDMDLVCRAHQVVEDGYEF 256
+D WG R ++ F P +V E + N DL + + DGYEF
Sbjct: 63 KDAGAWGAEQRESAFPFQPGSVVEVCISFNQTDLTIK----LPDGYEF 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.144 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,188,184
Number of Sequences: 62578
Number of extensions: 454895
Number of successful extensions: 977
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 902
Number of HSP's gapped (non-prelim): 37
length of query: 305
length of database: 14,973,337
effective HSP length: 98
effective length of query: 207
effective length of database: 8,840,693
effective search space: 1830023451
effective search space used: 1830023451
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 51 (24.3 bits)