Query 021907
Match_columns 305
No_of_seqs 264 out of 1909
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:34:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021907.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021907hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 8.6E-83 1.9E-87 559.0 16.1 284 5-299 2-286 (303)
2 PTZ00480 serine/threonine-prot 100.0 1.1E-78 2.3E-83 567.4 30.6 300 2-303 7-306 (320)
3 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.8E-77 3.9E-82 555.8 29.6 292 6-299 2-293 (293)
4 KOG0374 Serine/threonine speci 100.0 1.1E-77 2.4E-82 562.4 25.1 297 2-298 5-303 (331)
5 PTZ00244 serine/threonine-prot 100.0 6.2E-77 1.3E-81 551.8 28.5 292 4-297 2-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 3E-76 6.6E-81 551.6 30.3 283 2-295 3-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 3.4E-76 7.5E-81 545.3 27.9 283 6-299 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 2.6E-75 5.6E-80 542.7 28.4 286 5-301 2-289 (303)
9 smart00156 PP2Ac Protein phosp 100.0 4.2E-74 9E-79 528.8 29.4 270 29-298 1-270 (271)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 3.1E-73 6.7E-78 530.4 30.1 284 6-300 3-299 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.5E-73 3.3E-78 533.9 27.5 287 2-299 12-305 (316)
12 KOG0373 Serine/threonine speci 100.0 1.9E-74 4E-79 499.6 15.6 293 1-304 1-295 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 8.6E-73 1.9E-77 529.2 27.6 289 9-297 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 6.6E-69 1.4E-73 509.5 30.6 301 2-303 8-374 (377)
15 KOG0375 Serine-threonine phosp 100.0 2.5E-66 5.4E-71 475.2 11.2 268 28-296 60-340 (517)
16 KOG0371 Serine/threonine prote 100.0 4.2E-65 9E-70 450.1 11.3 284 6-300 20-304 (319)
17 KOG0377 Protein serine/threoni 100.0 7.7E-58 1.7E-62 427.8 14.1 268 28-296 133-430 (631)
18 KOG0376 Serine-threonine phosp 100.0 3E-50 6.6E-55 383.7 12.6 276 28-304 182-466 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2.8E-37 6E-42 275.5 18.7 214 59-283 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 100.0 3.6E-27 7.7E-32 209.5 16.6 175 59-268 1-196 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 2E-26 4.4E-31 209.5 18.0 203 56-292 1-230 (245)
22 PRK00166 apaH diadenosine tetr 99.9 9.2E-25 2E-29 201.4 18.6 219 56-288 1-262 (275)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 1.7E-24 3.6E-29 194.2 16.2 115 59-176 2-143 (222)
24 cd07423 MPP_PrpE Bacillus subt 99.9 2.3E-24 5.1E-29 194.6 16.6 120 56-178 1-142 (234)
25 cd07422 MPP_ApaH Escherichia c 99.9 1.6E-24 3.4E-29 198.0 12.4 119 58-180 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 1.8E-24 4E-29 198.4 11.7 121 56-180 1-128 (279)
27 PRK11439 pphA serine/threonine 99.9 2.8E-23 6.1E-28 185.7 11.0 116 55-176 16-146 (218)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.6E-22 3.6E-27 179.2 12.9 168 56-254 1-183 (207)
29 PHA02239 putative protein phos 99.9 3E-22 6.5E-27 180.9 13.8 174 56-271 1-221 (235)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 9.2E-22 2E-26 181.0 14.6 188 57-273 3-283 (304)
31 PRK09968 serine/threonine-spec 99.8 3.7E-21 8E-26 172.1 10.6 115 56-176 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 5.2E-13 1.1E-17 109.5 11.5 159 56-250 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 3.8E-10 8.1E-15 94.9 16.0 84 57-177 1-87 (155)
34 PF12850 Metallophos_2: Calcin 99.2 1.2E-10 2.6E-15 97.1 12.9 152 56-285 1-152 (156)
35 TIGR00040 yfcE phosphoesterase 99.2 7.4E-10 1.6E-14 93.8 14.3 63 56-127 1-64 (158)
36 PRK09453 phosphodiesterase; Pr 99.2 1E-10 2.3E-15 101.4 9.2 68 56-127 1-76 (182)
37 cd07379 MPP_239FB Homo sapiens 99.0 1.4E-09 3.1E-14 89.6 10.2 118 57-255 1-120 (135)
38 COG0639 ApaH Diadenosine tetra 99.0 3.2E-10 6.9E-15 92.8 5.2 143 129-272 3-154 (155)
39 cd07397 MPP_DevT Myxococcus xa 98.9 6.1E-09 1.3E-13 94.2 10.4 156 57-251 2-208 (238)
40 cd07388 MPP_Tt1561 Thermus the 98.9 1.5E-08 3.2E-13 91.1 12.3 71 56-127 5-75 (224)
41 cd00838 MPP_superfamily metall 98.9 2.7E-08 5.9E-13 79.0 11.4 117 59-255 1-119 (131)
42 cd07394 MPP_Vps29 Homo sapiens 98.8 3.2E-07 6.8E-12 79.7 16.0 59 57-127 1-65 (178)
43 PRK05340 UDP-2,3-diacylglucosa 98.8 3.3E-07 7.2E-12 83.0 15.8 212 56-295 1-238 (241)
44 cd07392 MPP_PAE1087 Pyrobaculu 98.7 1.7E-07 3.6E-12 80.5 11.7 65 58-128 1-66 (188)
45 cd07404 MPP_MS158 Microscilla 98.7 5.3E-08 1.1E-12 82.9 8.1 67 58-127 1-68 (166)
46 cd07403 MPP_TTHA0053 Thermus t 98.6 6.4E-07 1.4E-11 73.6 11.2 107 59-255 1-107 (129)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 1.3E-06 2.8E-11 78.8 12.5 205 58-287 1-229 (231)
48 cd07400 MPP_YydB Bacillus subt 98.5 3.6E-06 7.7E-11 69.6 12.5 117 58-255 1-129 (144)
49 cd07399 MPP_YvnB Bacillus subt 98.4 2.1E-05 4.6E-10 70.1 15.9 194 57-297 2-213 (214)
50 COG0622 Predicted phosphoester 98.3 2.9E-05 6.2E-10 67.1 15.4 160 56-299 2-167 (172)
51 cd07385 MPP_YkuE_C Bacillus su 98.3 1.6E-06 3.4E-11 76.9 5.9 71 56-128 2-77 (223)
52 PRK11340 phosphodiesterase Yae 98.2 2.4E-06 5.1E-11 78.9 7.2 70 56-127 50-125 (271)
53 cd07383 MPP_Dcr2 Saccharomyces 98.2 6E-05 1.3E-09 66.0 15.8 70 56-125 3-87 (199)
54 PRK11148 cyclic 3',5'-adenosin 98.1 0.00012 2.7E-09 67.5 15.6 71 55-127 14-98 (275)
55 TIGR03729 acc_ester putative p 98.0 1.1E-05 2.3E-10 73.0 6.8 68 57-127 1-74 (239)
56 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.00026 5.6E-09 64.6 14.1 71 57-127 6-99 (262)
57 COG2129 Predicted phosphoester 97.9 0.0028 6E-08 56.7 19.8 211 55-294 3-223 (226)
58 cd07396 MPP_Nbla03831 Homo sap 97.9 3E-05 6.6E-10 71.3 7.7 73 57-129 2-88 (267)
59 TIGR00619 sbcd exonuclease Sbc 97.9 2.6E-05 5.7E-10 71.3 7.3 72 56-127 1-88 (253)
60 PRK04036 DNA polymerase II sma 97.9 3.4E-05 7.4E-10 77.4 8.2 114 55-175 243-388 (504)
61 PHA02546 47 endonuclease subun 97.8 4.3E-05 9.2E-10 72.9 7.2 72 56-127 1-89 (340)
62 cd07402 MPP_GpdQ Enterobacter 97.8 9.7E-05 2.1E-09 66.1 8.0 69 57-127 1-83 (240)
63 cd07390 MPP_AQ1575 Aquifex aeo 97.7 0.00011 2.3E-09 63.0 7.7 67 58-129 1-84 (168)
64 cd07398 MPP_YbbF-LpxH Escheric 97.7 0.00011 2.3E-09 64.8 7.6 68 59-127 1-82 (217)
65 cd00839 MPP_PAPs purple acid p 97.7 0.0014 3E-08 60.6 14.8 70 56-129 5-83 (294)
66 cd07391 MPP_PF1019 Pyrococcus 97.7 0.00014 3.1E-09 62.4 7.3 57 71-127 30-88 (172)
67 cd08165 MPP_MPPE1 human MPPE1 97.6 0.00043 9.3E-09 58.7 9.9 47 82-128 38-90 (156)
68 KOG0376 Serine-threonine phosp 97.6 5E-06 1.1E-10 80.9 -2.5 238 28-273 14-299 (476)
69 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00013 2.9E-09 64.1 6.6 74 57-130 1-92 (223)
70 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00013 2.9E-09 67.1 6.7 70 58-127 1-86 (262)
71 PRK10966 exonuclease subunit S 97.6 0.00015 3.3E-09 70.9 7.1 72 56-128 1-88 (407)
72 TIGR00024 SbcD_rel_arch putati 97.5 0.0003 6.6E-09 63.3 7.7 69 56-128 15-103 (225)
73 PF06874 FBPase_2: Firmicute f 97.5 0.00071 1.5E-08 68.3 9.9 65 227-293 507-581 (640)
74 COG2908 Uncharacterized protei 97.4 0.0013 2.9E-08 59.2 10.6 199 59-290 1-230 (237)
75 TIGR00583 mre11 DNA repair pro 97.4 0.00046 1E-08 67.3 8.0 74 55-128 3-124 (405)
76 COG1409 Icc Predicted phosphoh 97.4 0.00067 1.5E-08 61.9 8.4 74 56-131 1-82 (301)
77 cd07386 MPP_DNA_pol_II_small_a 97.4 0.00037 8.1E-09 63.1 6.4 68 59-128 2-95 (243)
78 cd07393 MPP_DR1119 Deinococcus 97.3 0.00048 1E-08 62.1 6.5 67 58-126 1-83 (232)
79 cd07401 MPP_TMEM62_N Homo sapi 97.1 0.001 2.3E-08 60.8 6.5 70 58-127 2-89 (256)
80 COG4186 Predicted phosphoester 97.0 0.0023 5E-08 54.1 6.6 70 58-131 6-90 (186)
81 COG1408 Predicted phosphohydro 96.9 0.0021 4.6E-08 59.9 6.9 72 56-129 45-120 (284)
82 cd07380 MPP_CWF19_N Schizosacc 96.7 0.0035 7.6E-08 52.9 5.7 119 59-250 1-121 (150)
83 cd07384 MPP_Cdc1_like Saccharo 96.7 0.0041 8.9E-08 53.5 6.1 47 82-128 45-101 (171)
84 cd08166 MPP_Cdc1_like_1 unchar 96.5 0.006 1.3E-07 53.7 5.9 46 82-127 42-93 (195)
85 cd00845 MPP_UshA_N_like Escher 96.5 0.0047 1E-07 55.8 5.4 66 57-127 2-82 (252)
86 COG0420 SbcD DNA repair exonuc 96.3 0.011 2.4E-07 57.2 7.6 74 56-129 1-90 (390)
87 cd08163 MPP_Cdc1 Saccharomyces 96.3 0.049 1.1E-06 50.0 11.2 24 226-249 203-226 (257)
88 PLN02533 probable purple acid 96.0 0.01 2.2E-07 58.5 5.1 71 55-128 139-212 (427)
89 PF14582 Metallophos_3: Metall 95.9 0.0082 1.8E-07 53.9 3.7 73 56-128 6-103 (255)
90 cd07410 MPP_CpdB_N Escherichia 95.7 0.015 3.2E-07 53.6 4.9 66 57-127 2-95 (277)
91 COG1311 HYS2 Archaeal DNA poly 95.7 0.39 8.4E-06 47.6 14.5 208 57-287 227-461 (481)
92 cd08164 MPP_Ted1 Saccharomyces 95.6 0.027 6E-07 49.5 5.9 66 62-127 23-111 (193)
93 cd07378 MPP_ACP5 Homo sapiens 95.1 0.054 1.2E-06 49.5 6.3 70 57-127 2-83 (277)
94 cd07387 MPP_PolD2_C PolD2 (DNA 94.8 1.3 2.9E-05 40.7 14.5 49 240-293 204-255 (257)
95 COG1407 Predicted ICC-like pho 94.7 0.13 2.7E-06 46.6 7.4 101 54-177 18-140 (235)
96 cd07408 MPP_SA0022_N Staphyloc 94.6 0.056 1.2E-06 49.3 5.2 66 57-127 2-82 (257)
97 cd00842 MPP_ASMase acid sphing 94.4 1.1 2.4E-05 41.4 13.5 72 59-130 41-125 (296)
98 cd07412 MPP_YhcR_N Bacillus su 94.1 0.06 1.3E-06 50.1 4.3 66 57-127 2-88 (288)
99 KOG3325 Membrane coat complex 93.6 0.82 1.8E-05 38.6 9.5 115 58-255 3-123 (183)
100 KOG0918 Selenium-binding prote 93.5 0.003 6.5E-08 60.6 -5.7 204 83-297 48-262 (476)
101 cd07411 MPP_SoxB_N Thermus the 92.9 0.2 4.3E-06 45.9 5.5 65 57-127 2-95 (264)
102 COG1768 Predicted phosphohydro 92.8 0.47 1E-05 41.3 7.2 74 81-165 42-117 (230)
103 KOG1432 Predicted DNA repair e 91.8 0.54 1.2E-05 44.7 6.9 49 81-129 99-149 (379)
104 KOG3662 Cell division control 91.5 0.39 8.5E-06 46.8 5.8 44 83-126 94-143 (410)
105 PRK09419 bifunctional 2',3'-cy 91.4 0.25 5.3E-06 54.8 4.9 66 57-127 662-736 (1163)
106 PF08321 PPP5: PPP5 TPR repeat 91.3 0.54 1.2E-05 36.6 5.3 43 2-54 53-95 (95)
107 cd07409 MPP_CD73_N CD73 ecto-5 90.5 0.55 1.2E-05 43.5 5.7 66 57-127 2-94 (281)
108 cd07406 MPP_CG11883_N Drosophi 89.6 0.67 1.4E-05 42.3 5.4 56 66-126 21-82 (257)
109 TIGR00282 metallophosphoestera 88.7 0.85 1.8E-05 42.2 5.4 67 56-127 1-71 (266)
110 PF04042 DNA_pol_E_B: DNA poly 87.2 1 2.2E-05 39.5 4.8 72 58-129 1-93 (209)
111 cd07407 MPP_YHR202W_N Saccharo 87.2 0.78 1.7E-05 42.7 4.2 66 57-127 7-97 (282)
112 KOG2476 Uncharacterized conser 86.8 1.4 3.1E-05 43.4 5.8 69 55-124 5-75 (528)
113 COG0737 UshA 5'-nucleotidase/2 86.1 1 2.2E-05 45.4 4.7 69 55-128 26-116 (517)
114 KOG2863 RNA lariat debranching 85.9 0.87 1.9E-05 43.6 3.8 73 56-128 1-89 (456)
115 cd07405 MPP_UshA_N Escherichia 85.8 1 2.2E-05 41.8 4.2 66 57-127 2-87 (285)
116 KOG3339 Predicted glycosyltran 84.6 7.6 0.00016 34.0 8.6 85 84-173 40-140 (211)
117 cd08162 MPP_PhoA_N Synechococc 84.6 1.6 3.4E-05 41.3 4.9 65 58-127 3-91 (313)
118 PRK09420 cpdB bifunctional 2', 83.0 1.7 3.7E-05 45.2 4.8 69 54-127 24-122 (649)
119 TIGR01390 CycNucDiestase 2',3' 82.6 1.7 3.7E-05 45.0 4.6 67 56-127 3-99 (626)
120 PRK09419 bifunctional 2',3'-cy 82.2 1.7 3.8E-05 48.2 4.8 67 56-127 42-139 (1163)
121 COG3855 Fbp Uncharacterized pr 81.4 1.1 2.4E-05 44.2 2.5 41 84-129 192-232 (648)
122 cd07382 MPP_DR1281 Deinococcus 79.4 4.5 9.7E-05 37.2 5.7 66 57-127 1-70 (255)
123 PTZ00422 glideosome-associated 75.7 5.6 0.00012 38.9 5.5 72 56-127 27-109 (394)
124 PRK11907 bifunctional 2',3'-cy 75.3 4.2 9.1E-05 43.4 4.9 68 55-127 115-213 (814)
125 TIGR01530 nadN NAD pyrophospha 72.5 6.8 0.00015 39.9 5.5 65 58-127 3-94 (550)
126 KOG3947 Phosphoesterases [Gene 72.2 5.2 0.00011 37.2 4.0 64 57-128 63-127 (305)
127 PTZ00235 DNA polymerase epsilo 71.9 15 0.00033 34.4 7.1 72 56-127 28-122 (291)
128 PRK09558 ushA bifunctional UDP 69.4 5.8 0.00013 40.3 4.2 68 55-127 34-121 (551)
129 PRK09418 bifunctional 2',3'-cy 64.8 9.2 0.0002 40.8 4.7 67 55-126 39-141 (780)
130 KOG2310 DNA repair exonuclease 64.3 23 0.00049 36.1 6.9 55 55-109 13-79 (646)
131 PF14164 YqzH: YqzH-like prote 54.4 46 0.001 24.0 5.3 47 1-50 1-47 (64)
132 PF15007 CEP44: Centrosomal sp 50.9 6.1 0.00013 32.6 0.5 86 63-162 1-88 (131)
133 PF02875 Mur_ligase_C: Mur lig 49.2 57 0.0012 24.3 5.7 71 54-124 10-82 (91)
134 PF12641 Flavodoxin_3: Flavodo 49.1 85 0.0018 26.6 7.2 102 59-179 2-116 (160)
135 KOG1378 Purple acid phosphatas 47.0 36 0.00077 33.9 5.1 34 229-262 322-355 (452)
136 KOG2679 Purple (tartrate-resis 46.7 10 0.00022 35.4 1.2 67 57-127 45-126 (336)
137 PF06874 FBPase_2: Firmicute f 46.1 20 0.00043 37.0 3.3 41 84-129 186-226 (640)
138 COG4320 Uncharacterized protei 40.3 62 0.0013 30.9 5.3 60 44-111 45-108 (410)
139 PF13258 DUF4049: Domain of un 38.1 1.1E+02 0.0025 27.9 6.5 58 114-178 127-187 (318)
140 PRK10773 murF UDP-N-acetylmura 31.7 1.6E+02 0.0035 29.0 7.2 66 56-122 325-392 (453)
141 COG0634 Hpt Hypoxanthine-guani 29.7 3.8E+02 0.0082 23.3 9.4 79 25-107 8-117 (178)
142 COG0148 Eno Enolase [Carbohydr 28.3 4.3E+02 0.0094 26.1 9.0 91 28-120 168-281 (423)
143 cd07381 MPP_CapA CapA and rela 26.4 1.2E+02 0.0026 26.9 4.9 41 230-272 198-238 (239)
144 PF09587 PGA_cap: Bacterial ca 23.8 1.5E+02 0.0033 26.5 5.0 41 230-272 207-247 (250)
145 cd07382 MPP_DR1281 Deinococcus 23.8 81 0.0018 28.9 3.2 37 85-122 1-37 (255)
146 PF09637 Med18: Med18 protein; 23.8 1.5E+02 0.0031 27.0 4.9 39 227-268 139-177 (250)
147 TIGR03729 acc_ester putative p 23.0 1.2E+02 0.0027 26.8 4.2 29 225-253 195-223 (239)
148 TIGR00282 metallophosphoestera 22.0 1.2E+02 0.0025 28.1 3.9 39 85-127 2-41 (266)
149 TIGR01143 murF UDP-N-acetylmur 21.9 4.2E+02 0.009 25.6 8.0 11 114-124 396-406 (417)
150 smart00854 PGA_cap Bacterial c 21.4 1.9E+02 0.004 25.8 5.1 40 231-272 197-236 (239)
151 TIGR01143 murF UDP-N-acetylmur 20.8 3.8E+02 0.0081 26.0 7.4 65 56-120 296-362 (417)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-83 Score=559.02 Aligned_cols=284 Identities=48% Similarity=0.961 Sum_probs=275.3
Q ss_pred hHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCC
Q 021907 5 VLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84 (305)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~ 84 (305)
+++..|+++...+ .++++++..||.+++++|.+|+++++++.|++|+|||||++.||+.+|+..|-+++.
T Consensus 2 dldr~ie~L~~~~----------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t 71 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE----------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPET 71 (303)
T ss_pred cHHHHHHHHHhcC----------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCC
Confidence 5788899998876 689999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhc-hhhHHhhhhhcccCCeEEE
Q 021907 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAAL 163 (305)
Q Consensus 85 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPl~~~ 163 (305)
+|+|||||||||.+|+|++.+|+.||++||++|++||||||.+.++..|||++||.+||+ ..+|+...+.|++||++|+
T Consensus 72 ~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~ai 151 (303)
T KOG0372|consen 72 NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAI 151 (303)
T ss_pred ceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhhe
Confidence 999999999999999999999999999999999999999999999999999999999995 6899999999999999999
Q ss_pred EcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEE
Q 021907 164 IDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLV 243 (305)
Q Consensus 164 i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~i 243 (305)
|++++||||||+||.+.++|+|+.+.|..++|..+.++|+|||||.+. .+|..|+||+|+.||.+++++|++.||+++|
T Consensus 152 id~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I 230 (303)
T KOG0372|consen 152 IDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLI 230 (303)
T ss_pred ecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHH
Confidence 999999999999999999999999999999999999999999999864 7999999999999999999999999999999
Q ss_pred EEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCC
Q 021907 244 CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTD 299 (305)
Q Consensus 244 IRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 299 (305)
+|+||.+.+||++.|+++++|||||||||+..+|.||+|.++++..-.|.+|+-++
T Consensus 231 ~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~ 286 (303)
T KOG0372|consen 231 CRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAP 286 (303)
T ss_pred HHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecch
Confidence 99999999999999999999999999999999999999999999999999998654
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.1e-78 Score=567.43 Aligned_cols=300 Identities=74% Similarity=1.349 Sum_probs=286.5
Q ss_pred ChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCC
Q 021907 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFP 81 (305)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~ 81 (305)
...+++++|+++++.+. ..++....++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+++
T Consensus 7 ~~~~~~~~i~~~~~~~~--~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~ 84 (320)
T PTZ00480 7 GEIDVDNIIERLLSVRG--SKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYP 84 (320)
T ss_pred cCcCHHHHHHHHHhccc--cCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCC
Confidence 45569999999999764 3346667899999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeE
Q 021907 82 PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVA 161 (305)
Q Consensus 82 ~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~ 161 (305)
+.++|||||||||||++++|++.+++++|+.+|.++++||||||...++..|||+.|+..+|+..+|..++++|+.||++
T Consensus 85 ~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPla 164 (320)
T PTZ00480 85 PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVA 164 (320)
T ss_pred CcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCc
Q 021907 162 ALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMD 241 (305)
Q Consensus 162 ~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~ 241 (305)
|+|++++|||||||+|.+.++++|+.++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||++
T Consensus 165 AiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~ 244 (320)
T PTZ00480 165 ALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELD 244 (320)
T ss_pred heecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred EEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCCCC
Q 021907 242 LVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKKPR 303 (305)
Q Consensus 242 ~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 303 (305)
+||||||++++||++.++++|+|||||||||+..+|+||+|.++++++++|++|+|.+.+.+
T Consensus 245 ~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~ 306 (320)
T PTZ00480 245 LICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQG 306 (320)
T ss_pred EEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccccc
Confidence 99999999999999999999999999999999999999999999999999999998776543
No 3
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.8e-77 Score=555.78 Aligned_cols=292 Identities=80% Similarity=1.431 Sum_probs=281.2
Q ss_pred HHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCCc
Q 021907 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN 85 (305)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~~ 85 (305)
++++|+++++.++. .++.+..++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++.++
T Consensus 2 ~~~~i~~~~~~~~~--~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~ 79 (293)
T cd07414 2 IDSIIERLLEVRGS--RPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESN 79 (293)
T ss_pred HHHHHHHHHhcccc--CCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcce
Confidence 68899999997753 3467778999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEc
Q 021907 86 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID 165 (305)
Q Consensus 86 ~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~ 165 (305)
|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++
T Consensus 80 ~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~ 159 (293)
T cd07414 80 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIID 159 (293)
T ss_pred EEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEE
Q 021907 166 DKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCR 245 (305)
Q Consensus 166 ~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIR 245 (305)
++++|||||++|.+.++++|+.++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|||
T Consensus 160 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 239 (293)
T cd07414 160 EKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICR 239 (293)
T ss_pred CcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEE
Confidence 99999999999999999999999999999999999999999999878899999999999999999999999999999999
Q ss_pred eeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCC
Q 021907 246 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTD 299 (305)
Q Consensus 246 gH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 299 (305)
|||++++||++.++++|+||||||||||..+|+||+|.++++++++|++|+|.+
T Consensus 240 ~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~~ 293 (293)
T cd07414 240 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAE 293 (293)
T ss_pred CCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999999998753
No 4
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.1e-77 Score=562.35 Aligned_cols=297 Identities=72% Similarity=1.254 Sum_probs=283.3
Q ss_pred ChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCC-C
Q 021907 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGG-F 80 (305)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g-~ 80 (305)
....++++|.+++...+.......+..++++++.+||..+.++|.++|+++++++||.|+|||||++.||+++|...| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 345678889999887753222333556999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhc-hhhHHhhhhhcccCC
Q 021907 81 PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKIFTDCFNCLP 159 (305)
Q Consensus 81 ~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 159 (305)
|++.+|||||||||||++|+|++.+|+++|++||+++++||||||.+.++..|||++||..+|+ ..+|..+++.|+.||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 699999999999999
Q ss_pred eEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCC
Q 021907 160 VAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKND 239 (305)
Q Consensus 160 l~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~ 239 (305)
++|+|+++++|+|||++|.+.++++|+.+.||++.++.+++.|++||||.....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q 021907 240 MDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPT 298 (305)
Q Consensus 240 l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 298 (305)
+++||||||++++||+++.+++++||||||+|||.+.|+||+|.|++++.++|++++|.
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999994
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=6.2e-77 Score=551.77 Aligned_cols=292 Identities=60% Similarity=1.121 Sum_probs=279.4
Q ss_pred hhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCC
Q 021907 4 AVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPK 83 (305)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~ 83 (305)
+-++.+|+++++... ..++.+..++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.
T Consensus 2 ~~~~~~i~~~~~~~~--~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~ 79 (294)
T PTZ00244 2 SLVQTLIEKMLTVKG--NRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPY 79 (294)
T ss_pred chHHHHHHHHHhccc--CCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCc
Confidence 457899999999764 334566689999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEE
Q 021907 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAAL 163 (305)
Q Consensus 84 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~ 163 (305)
++|+|||||||||++|+|++.+++++|+.+|.+++++|||||...++..|||.+++..+|+..+|..+.++|++||++|+
T Consensus 80 ~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaai 159 (294)
T PTZ00244 80 SNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCV 159 (294)
T ss_pred ccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEE
Q 021907 164 IDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLV 243 (305)
Q Consensus 164 i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~i 243 (305)
++++++|||||++|.+.++++++.++||.+.++.+++.|+|||||.....+|.+++||.|+.||++++++||++||+++|
T Consensus 160 i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~i 239 (294)
T PTZ00244 160 ISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLI 239 (294)
T ss_pred ecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEE
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred EEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEcc
Q 021907 244 CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKP 297 (305)
Q Consensus 244 IRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 297 (305)
|||||++++||+++++++|+||||||||||..+|+||+|.|++++.++|++++.
T Consensus 240 iR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 240 VRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred EEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999999998764
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3e-76 Score=551.59 Aligned_cols=283 Identities=34% Similarity=0.629 Sum_probs=261.0
Q ss_pred ChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccC----cEEEEecCCCCHHHHHHHHHh
Q 021907 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAA----PIKICGDIHGQYSDLLRLFEY 77 (305)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~----~i~viGDiHG~~~~L~~il~~ 77 (305)
+.+.++.+|+++++.. .++++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+.
T Consensus 3 ~~~~~~~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~ 72 (321)
T cd07420 3 TKDHIDALIEAFKEKQ----------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYK 72 (321)
T ss_pred CHHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 4678999999998765 68999999999999999999999999976 899999999999999999999
Q ss_pred CCCCC-CCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhc---hhhHHhhhh
Q 021907 78 GGFPP-KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN---VRLWKIFTD 153 (305)
Q Consensus 78 ~g~~~-~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~ 153 (305)
.|+++ .++|||||||||||++|+||+.+|++||+++|++|++||||||.+.++..|||++||..+|+ ..+|+.+.+
T Consensus 73 ~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~ 152 (321)
T cd07420 73 NGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLED 152 (321)
T ss_pred cCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHH
Confidence 99985 46799999999999999999999999999999999999999999999999999999999997 789999999
Q ss_pred hcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCC-----CCC----------------------chhHHHHHhc
Q 021907 154 CFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTD-----VPD----------------------SGLLCDLLWS 206 (305)
Q Consensus 154 ~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~dllWs 206 (305)
+|+.||+||+|++++|||||||+| ..++++|+.++|+.. .|. .+++.|+|||
T Consensus 153 ~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWS 231 (321)
T cd07420 153 VFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWS 231 (321)
T ss_pred HHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeec
Confidence 999999999999999999999997 578999999987421 111 1467899999
Q ss_pred CCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcC
Q 021907 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDD 286 (305)
Q Consensus 207 dP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~ 286 (305)
||......|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.+++
T Consensus 232 DP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~ 311 (321)
T cd07420 232 DPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGP 311 (321)
T ss_pred CCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECC
Confidence 99976555777799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEE
Q 021907 287 SLMCSFQIL 295 (305)
Q Consensus 287 ~~~~~~~~~ 295 (305)
+++++|++|
T Consensus 312 ~~~~~f~~~ 320 (321)
T cd07420 312 DLTPHFVQY 320 (321)
T ss_pred CCceeEEEe
Confidence 999999876
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=3.4e-76 Score=545.25 Aligned_cols=283 Identities=51% Similarity=0.985 Sum_probs=272.4
Q ss_pred HHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCCc
Q 021907 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN 85 (305)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~~ 85 (305)
++.+|+++++.. .++++++.+||++|++++++||++++++.|++||||||||+.+|.++|+..++++.++
T Consensus 2 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~ 71 (285)
T cd07415 2 LDKWIEQLKKCE----------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTN 71 (285)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCe
Confidence 678899998754 5899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhch-hhHHhhhhhcccCCeEEEE
Q 021907 86 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALI 164 (305)
Q Consensus 86 ~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPl~~~i 164 (305)
|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|..+.++|++||++|++
T Consensus 72 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii 151 (285)
T cd07415 72 YLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALI 151 (285)
T ss_pred EEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEe
Confidence 999999999999999999999999999999999999999999999999999999999974 8999999999999999999
Q ss_pred cCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEE
Q 021907 165 DDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVC 244 (305)
Q Consensus 165 ~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iI 244 (305)
+++++||||||+|.+.++++|+.++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++||+++||
T Consensus 152 ~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~ii 230 (285)
T cd07415 152 DNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLIC 230 (285)
T ss_pred CCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEE
Confidence 99999999999999999999999999999999999999999999865 78999999999999999999999999999999
Q ss_pred EeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCC
Q 021907 245 RAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTD 299 (305)
Q Consensus 245 RgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 299 (305)
||||++++||++.++++|+|||||||||+..+|+||+|.++++++++|.+|+|.+
T Consensus 231 R~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 231 RAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999999999989999999999999999999999864
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.6e-75 Score=542.67 Aligned_cols=286 Identities=45% Similarity=0.927 Sum_probs=271.8
Q ss_pred hHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCC
Q 021907 5 VLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKA 84 (305)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~ 84 (305)
+++.+|+++.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.+
T Consensus 2 ~~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~ 71 (303)
T PTZ00239 2 DIDRHIATLLNGG----------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNA 71 (303)
T ss_pred CHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc
Confidence 3788899998754 589999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhch-hhHHhhhhhcccCCeEEE
Q 021907 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV-RLWKIFTDCFNCLPVAAL 163 (305)
Q Consensus 85 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPl~~~ 163 (305)
+|+|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.+.++|++||++|+
T Consensus 72 ~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaai 151 (303)
T PTZ00239 72 NYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAAL 151 (303)
T ss_pred eEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheE
Confidence 9999999999999999999999999999999999999999999999999999999999964 789999999999999999
Q ss_pred EcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEE
Q 021907 164 IDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLV 243 (305)
Q Consensus 164 i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~i 243 (305)
++++++|||||++|.+.++++|+.+.||.+.|.++.+.|+|||||.. ..+|.+|+||.|+.||++++++||++||+++|
T Consensus 152 i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~i 230 (303)
T PTZ00239 152 IEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLI 230 (303)
T ss_pred EcCeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEE
Confidence 99999999999999999999999999999999999999999999985 47899999999999999999999999999999
Q ss_pred EEeeeeecCCeEEecC-CeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCC
Q 021907 244 CRAHQVVEDGYEFFAD-RQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKK 301 (305)
Q Consensus 244 IRgH~~~~~G~~~~~~-~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 301 (305)
|||||++++||++.++ ++|+|||||||||+..+|+||+|.+++++++.|++|+|.+.+
T Consensus 231 iR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 231 CRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred EEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 9999999999998765 459999999999999999999999999999999999987654
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.2e-74 Score=528.84 Aligned_cols=270 Identities=61% Similarity=1.086 Sum_probs=262.8
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHH
Q 021907 29 LSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLA 108 (305)
Q Consensus 29 ~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~ 108 (305)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcC
Q 021907 109 YKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKL 188 (305)
Q Consensus 109 lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i 188 (305)
+|+.+|.++++||||||...++..|||.+|+..+|+.++|+.+.++|++||++++++++++|||||++|.+.++++|+.+
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecC
Q 021907 189 PRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSA 268 (305)
Q Consensus 189 ~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 268 (305)
+||.+.+++++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||||++++||++.++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q 021907 269 PNYCGEFDNSGAMMSVDDSLMCSFQILKPT 298 (305)
Q Consensus 269 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 298 (305)
||||+..+|+||++.++++.+++|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999999875
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.1e-73 Score=530.40 Aligned_cols=284 Identities=44% Similarity=0.826 Sum_probs=266.0
Q ss_pred HHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCCc
Q 021907 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN 85 (305)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~~ 85 (305)
++.+++.+.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ 72 (305)
T cd07416 3 IDVLKAHFMREG----------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTR 72 (305)
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCce
Confidence 566667776654 5899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEc
Q 021907 86 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID 165 (305)
Q Consensus 86 ~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~ 165 (305)
|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+.++|..+.++|++||++++++
T Consensus 73 ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~ 152 (305)
T cd07416 73 YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMN 152 (305)
T ss_pred EEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCC------CcccC-CCCcccccCHHHHHHHHHhC
Q 021907 166 DKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVK------GWGMN-DRGVSYTFGPDTVAEFLLKN 238 (305)
Q Consensus 166 ~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~ 238 (305)
++++|||||++|.+.++++|+.++||.+.+..+++.|+|||||..... +|.++ +||.|+.||++++++||++|
T Consensus 153 ~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n 232 (305)
T cd07416 153 QQFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKN 232 (305)
T ss_pred CCEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHc
Confidence 999999999999999999999999999888899999999999975432 47665 89999999999999999999
Q ss_pred CCcEEEEeeeeecCCeEEecCC------eEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCC
Q 021907 239 DMDLVCRAHQVVEDGYEFFADR------QLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300 (305)
Q Consensus 239 ~l~~iIRgH~~~~~G~~~~~~~------~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 300 (305)
|+++||||||++++||++++++ +|+||||||||||..+|+||+|.++++. ..|++|++.+-
T Consensus 233 ~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 233 NLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred CCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 9999999999999999998876 8999999999999999999999999985 69999987653
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.5e-73 Score=533.90 Aligned_cols=287 Identities=41% Similarity=0.810 Sum_probs=269.3
Q ss_pred ChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCc----EEEEecCCCCHHHHHHHHHh
Q 021907 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAP----IKICGDIHGQYSDLLRLFEY 77 (305)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~----i~viGDiHG~~~~L~~il~~ 77 (305)
+.+.++.+++++...+ .++++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~ 81 (316)
T cd07417 12 TLEFVKEMIEWFKDQK----------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFEL 81 (316)
T ss_pred CHHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHh
Confidence 3466788888887754 589999999999999999999999999866 99999999999999999999
Q ss_pred CCCCCC-CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcc
Q 021907 78 GGFPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFN 156 (305)
Q Consensus 78 ~g~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~ 156 (305)
.|+++. ++|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|+
T Consensus 82 ~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~ 161 (316)
T cd07417 82 NGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFN 161 (316)
T ss_pred cCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHH
Confidence 998765 5799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEcCcEEEecCCc-CCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHH
Q 021907 157 CLPVAALIDDKILCMHGGL-SPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFL 235 (305)
Q Consensus 157 ~LPl~~~i~~~il~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl 235 (305)
+||++++++++++|||||+ +|...++++++.++||.+.+.++++.|+|||||... .+|.+|+||.|+.||++++++||
T Consensus 162 ~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl 240 (316)
T cd07417 162 WLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFL 240 (316)
T ss_pred hchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHH
Confidence 9999999999999999999 567889999999999988888999999999999864 68999999999999999999999
Q ss_pred HhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcC-CCceEEEEEccCC
Q 021907 236 LKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDD-SLMCSFQILKPTD 299 (305)
Q Consensus 236 ~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~ 299 (305)
++||+++||||||++++||++.++++|+|||||||||+..+|+||+|.+++ +++++|++|+|.+
T Consensus 241 ~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~ 305 (316)
T cd07417 241 EENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVP 305 (316)
T ss_pred HHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCC
Confidence 999999999999999999999999999999999999999999999999999 8999999998643
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-74 Score=499.60 Aligned_cols=293 Identities=44% Similarity=0.902 Sum_probs=279.5
Q ss_pred CChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCC
Q 021907 1 MEPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGF 80 (305)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~ 80 (305)
|..-++++-|+.+-..+ .++++++..||+.++++|..|.++..++.|+.|+|||||++.||+++|+..|-
T Consensus 1 m~~~d~d~wi~~vk~ck----------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~ 70 (306)
T KOG0373|consen 1 MRKMDLDQWIETVKKCK----------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQ 70 (306)
T ss_pred CCcCCHHHHHHHHHHcC----------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCC
Confidence 44456788888887776 69999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhc-hhhHHhhhhhcccCC
Q 021907 81 PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKIFTDCFNCLP 159 (305)
Q Consensus 81 ~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 159 (305)
-|+.+|||+|||||||.+|+|++.+|+.||.+||.+|.+||||||.+.+...|||++||..||+ ...|+...+.|+.|+
T Consensus 71 vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~Lt 150 (306)
T KOG0373|consen 71 VPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLT 150 (306)
T ss_pred CCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhh
Confidence 8999999999999999999999999999999999999999999999999999999999999995 689999999999999
Q ss_pred eEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCC
Q 021907 160 VAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKND 239 (305)
Q Consensus 160 l~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~ 239 (305)
++|+|+++++|||||+||++.++|+|+.+.|..++|..+.++|++||||+. ++.|.-++||+|+.||.+++.+|..-|+
T Consensus 151 laAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~ 229 (306)
T KOG0373|consen 151 LAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINN 229 (306)
T ss_pred HHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccc
Confidence 999999999999999999999999999999999999999999999999986 7899999999999999999999999999
Q ss_pred CcEEEEeeeeecCCeEEecCCe-EEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCCCCCC
Q 021907 240 MDLVCRAHQVVEDGYEFFADRQ-LVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDKKPRF 304 (305)
Q Consensus 240 l~~iIRgH~~~~~G~~~~~~~~-~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~ 304 (305)
+++|+|+||.+++||++.+++| ++|||||||||...+|.|++|.++++++.++++|...++++++
T Consensus 230 L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~ 295 (306)
T KOG0373|consen 230 LNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRV 295 (306)
T ss_pred hHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCcccc
Confidence 9999999999999999999988 9999999999999999999999999999999999876665543
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=8.6e-73 Score=529.24 Aligned_cols=289 Identities=47% Similarity=0.841 Sum_probs=269.3
Q ss_pred HHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCC-----
Q 021907 9 IISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPK----- 83 (305)
Q Consensus 9 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~----- 83 (305)
+|++++++..+......+..++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 478999988865555678889999999999999999999999999999999999999999999999999998754
Q ss_pred ---CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhch------hhHHhhhhh
Q 021907 84 ---ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV------RLWKIFTDC 154 (305)
Q Consensus 84 ---~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~ 154 (305)
.+|||||||||||++|+|++.+++++++.+|.++++||||||.+.++..+||..++..+|+. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999998864 689999999
Q ss_pred cccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCC-CCCCchhHHHHHhcCCCCC--CCCcccCC---CCcc--ccc
Q 021907 155 FNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPT-DVPDSGLLCDLLWSDPGRD--VKGWGMND---RGVS--YTF 226 (305)
Q Consensus 155 f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~-~~~~~~~~~dllWsdP~~~--~~~~~~~~---rg~~--~~f 226 (305)
|+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+++.|+|||||... ..++.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999997 4456788999999999864 35677766 9988 699
Q ss_pred CHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEcc
Q 021907 227 GPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKP 297 (305)
Q Consensus 227 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 297 (305)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||++.+++++++++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=6.6e-69 Score=509.46 Aligned_cols=301 Identities=34% Similarity=0.612 Sum_probs=259.5
Q ss_pred ChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeecc----CcEEEEecCCCCHHHHHHHHHh
Q 021907 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELA----APIKICGDIHGQYSDLLRLFEY 77 (305)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~----~~i~viGDiHG~~~~L~~il~~ 77 (305)
+.+.++.+|+++......-..+.....++.+++.+||++|+++|++||++++++ .|++||||||||+.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 456788888887654210001123345889999999999999999999999998 7999999999999999999999
Q ss_pred CCCCCC-CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhch---hhHHhhhh
Q 021907 78 GGFPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV---RLWKIFTD 153 (305)
Q Consensus 78 ~g~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~ 153 (305)
.|+++. ++|||||||||||++|+|++.+++++|+.+|.+|++||||||.+.++..|||.+++..+|+. .+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 999875 45999999999999999999999999999999999999999999999999999999999964 69999999
Q ss_pred hcccCCeEEEEcCcEEEecCCc---------------------------CCCCCCHHHhhcCCCCC-CCCCch---hHHH
Q 021907 154 CFNCLPVAALIDDKILCMHGGL---------------------------SPDLINLDQIRKLPRPT-DVPDSG---LLCD 202 (305)
Q Consensus 154 ~f~~LPl~~~i~~~il~vHgGi---------------------------~p~~~~l~~i~~i~r~~-~~~~~~---~~~d 202 (305)
+|++||+++++++++||||||| +|.+.++++|+.++||. +.+..+ ++.|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 9999999999999999999999 34567999999999974 555443 4789
Q ss_pred HHhcCCCCCCCCcccC-CCCcccccCHHHHHHHHHhCCCcEEEEeeee------------ecCCeEEecC---CeEEEEe
Q 021907 203 LLWSDPGRDVKGWGMN-DRGVSYTFGPDTVAEFLLKNDMDLVCRAHQV------------VEDGYEFFAD---RQLVTIF 266 (305)
Q Consensus 203 llWsdP~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~------------~~~G~~~~~~---~~~iTif 266 (305)
+|||||... .+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+|||
T Consensus 248 lLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvF 326 (377)
T cd07418 248 VLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLF 326 (377)
T ss_pred eEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEe
Confidence 999999864 566665 7999999999999999999999999999996 6799999887 8999999
Q ss_pred cCCCCC------CCCCCeEEEEEEcCCC--ceEEEEEc---cCCCCCC
Q 021907 267 SAPNYC------GEFDNSGAMMSVDDSL--MCSFQILK---PTDKKPR 303 (305)
Q Consensus 267 Sa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~---~~~~~~~ 303 (305)
|||||| +..+|+||++.++.+- ..+|.+|+ |.++..|
T Consensus 327 Sa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (377)
T cd07418 327 SAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANP 374 (377)
T ss_pred cCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCc
Confidence 999999 5789999999997643 56666664 5555544
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.5e-66 Score=475.23 Aligned_cols=268 Identities=43% Similarity=0.857 Sum_probs=252.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHH
Q 021907 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLL 107 (305)
Q Consensus 28 ~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~ 107 (305)
+++++..+.|+.++..+|++|+++++++.||.|+|||||||.||+++|+..|-|...+|+|||||||||.+|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhc
Q 021907 108 AYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRK 187 (305)
Q Consensus 108 ~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~ 187 (305)
+||+.||...++||||||++.+...+.|.+||..||+.++|++.++.|+.||+||+.++.++|||||+||.+.+++||+.
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHhcCCCCCC------CCcccC-CCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCC
Q 021907 188 LPRPTDVPDSGLLCDLLWSDPGRDV------KGWGMN-DRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADR 260 (305)
Q Consensus 188 i~r~~~~~~~~~~~dllWsdP~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~ 260 (305)
+.|..++|.-+.++|+|||||.++. +.|..| .||+++.|...|+++||+.||+--|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999998642 234444 699999999999999999999999999999999999877654
Q ss_pred e------EEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEc
Q 021907 261 Q------LVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILK 296 (305)
Q Consensus 261 ~------~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 296 (305)
+ +|||||||||.+.++|+||||+.+++.+ .+.+|.
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVM-NIRQFn 340 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM-NIRQFN 340 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhcccc-eeeccC
Confidence 4 8999999999999999999999988865 444553
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-65 Score=450.08 Aligned_cols=284 Identities=48% Similarity=0.954 Sum_probs=269.8
Q ss_pred HHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCCCCc
Q 021907 6 LDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPPKAN 85 (305)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~~~~ 85 (305)
++.-|+.+...+ .+++.++..+|+.|+++|.+|.++..++.|++|+||+||||++|+++++..|..++..
T Consensus 20 vd~~ie~L~~ck----------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtn 89 (319)
T KOG0371|consen 20 VDPWIEQLYKCK----------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTN 89 (319)
T ss_pred cccchHHHHhcC----------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcc
Confidence 344455565555 5889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHh-chhhHHhhhhhcccCCeEEEE
Q 021907 86 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALI 164 (305)
Q Consensus 86 ~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPl~~~i 164 (305)
|+|+|||||||++|.|++.++.++|++||++|.+||||||.+.+...|||++||.+|| +..+|..|.+.|+++|++|.|
T Consensus 90 ylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali 169 (319)
T KOG0371|consen 90 YLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALI 169 (319)
T ss_pred eeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999 568999999999999999999
Q ss_pred cCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEE
Q 021907 165 DDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVC 244 (305)
Q Consensus 165 ~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iI 244 (305)
+++|||+|||++|.+.+++.++.+.|..++|-++.++|+|||||.. .-+|..++||+|+.||++..++|-.+||++++-
T Consensus 170 ~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslis 248 (319)
T KOG0371|consen 170 ESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLIS 248 (319)
T ss_pred ccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhH
Confidence 9999999999999999999999999988899999999999999985 589999999999999999999999999999999
Q ss_pred EeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCCC
Q 021907 245 RAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILKPTDK 300 (305)
Q Consensus 245 RgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 300 (305)
|+||-+.+||.+.+...++|||||||||...+|.+|++.++++...+|.+|+|++-
T Consensus 249 Rahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~ 304 (319)
T KOG0371|consen 249 RAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPR 304 (319)
T ss_pred HHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcc
Confidence 99999999999999999999999999999999999999999999999999999653
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-58 Score=427.85 Aligned_cols=268 Identities=35% Similarity=0.668 Sum_probs=243.7
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeecc----CcEEEEecCCCCHHHHHHHHHhCCCCCCCc-EEEeccccCCCCCcHHH
Q 021907 28 QLSESEIRMLCTVSREIFLQQPNLLELA----APIKICGDIHGQYSDLLRLFEYGGFPPKAN-YLFLGDYVDRGKQSLET 102 (305)
Q Consensus 28 ~~~~~~~~~l~~~a~~il~~e~~ll~~~----~~i~viGDiHG~~~~L~~il~~~g~~~~~~-~vfLGD~VDrG~~s~ev 102 (305)
.+.+..+..|+.+|+++|++.|++-+++ -.++|+||+||.++||.-+|-+.|+|..+. |||.||+||||.+|+|+
T Consensus 133 ~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEv 212 (631)
T KOG0377|consen 133 RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEV 212 (631)
T ss_pred hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhh
Confidence 6888999999999999999999999885 369999999999999999999999998755 99999999999999999
Q ss_pred HHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHh---chhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCC
Q 021907 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF---NVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDL 179 (305)
Q Consensus 103 l~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~ 179 (305)
|.+|+++-+.||..+++-|||||+..+|..|||..|+..+| +.++.+.+.++|+.||++.+|+.++|+||||+|. .
T Consensus 213 LmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~ 291 (631)
T KOG0377|consen 213 LMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-S 291 (631)
T ss_pred HHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCccc-c
Confidence 99999999999999999999999999999999999999999 6789999999999999999999999999999985 3
Q ss_pred CCHHHhhcCCC--------C-CC-------------CCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHh
Q 021907 180 INLDQIRKLPR--------P-TD-------------VPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLK 237 (305)
Q Consensus 180 ~~l~~i~~i~r--------~-~~-------------~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~ 237 (305)
++++-+..++| | ++ ..++..+.|++||||.....+|++.-||.|++||++++++||++
T Consensus 292 Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk 371 (631)
T KOG0377|consen 292 TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQK 371 (631)
T ss_pred hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHH
Confidence 56666665554 2 21 11356788999999998877787778999999999999999999
Q ss_pred CCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEc
Q 021907 238 NDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSLMCSFQILK 296 (305)
Q Consensus 238 ~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 296 (305)
.+++++||+|||.++||++.+|++|+|||||+||....+|+||++++.+.+.-.|.+..
T Consensus 372 ~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~ 430 (631)
T KOG0377|consen 372 HRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQ 430 (631)
T ss_pred hCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999887776654
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=3e-50 Score=383.71 Aligned_cols=276 Identities=41% Similarity=0.831 Sum_probs=256.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeccC----cEEEEecCCCCHHHHHHHHHhCCCCCC-CcEEEeccccCCCCCcHHH
Q 021907 28 QLSESEIRMLCTVSREIFLQQPNLLELAA----PIKICGDIHGQYSDLLRLFEYGGFPPK-ANYLFLGDYVDRGKQSLET 102 (305)
Q Consensus 28 ~~~~~~~~~l~~~a~~il~~e~~ll~~~~----~i~viGDiHG~~~~L~~il~~~g~~~~-~~~vfLGD~VDrG~~s~ev 102 (305)
.++..-+-+|+..++.+++++|++++++. .+.|+||+||++.++.++++..|.|+. ..|+|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 56667778899999999999999999864 489999999999999999999999876 4599999999999999999
Q ss_pred HHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCC-CCCC
Q 021907 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSP-DLIN 181 (305)
Q Consensus 103 l~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p-~~~~ 181 (305)
+..+++.|+.+|+++|++|||||...++..|||..++..+|.++.+..+.+.|..||++..|+++++.+|||+.. .-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999964 4468
Q ss_pred HHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCe
Q 021907 182 LDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQ 261 (305)
Q Consensus 182 l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~ 261 (305)
++++++|.|+...++.+..+++|||||... .|..++.||.|..||++++++||+.|++++|||||+..+.||+..++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988889999999999999864 8999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCeEEEEEEc-CCCceEEEEEcc--CCCCCCC
Q 021907 262 LVTIFSAPNYCGEFDNSGAMMSVD-DSLMCSFQILKP--TDKKPRF 304 (305)
Q Consensus 262 ~iTifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~--~~~~~~~ 304 (305)
|+|||||||||..++|.||++.++ +++.-.+..|++ -++-.||
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~m 466 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPM 466 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCc
Confidence 999999999999999999999999 678888888875 3444444
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=2.8e-37 Score=275.54 Aligned_cols=214 Identities=53% Similarity=0.864 Sum_probs=178.0
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHH
Q 021907 59 KICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 138 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 138 (305)
+|||||||++++|.++++..+.++.+++||+|||||||+.+.+++.+++.++.. |.++++||||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999999877 8899999999999988766655433
Q ss_pred H---------HHHhchhhHHhhhhhcccCCeEEEEcC-cEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCC
Q 021907 139 C---------KRRFNVRLWKIFTDCFNCLPVAALIDD-KILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDP 208 (305)
Q Consensus 139 ~---------~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP 208 (305)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345678888899999999999987 99999999999876555544 2234456789999999
Q ss_pred CCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEE
Q 021907 209 GRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMS 283 (305)
Q Consensus 209 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~ 283 (305)
.........+.++. |+++++.|++.++.+.|||||+++..|+....+++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 86444344444444 999999999999999999999999999876778899999999999876677776653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=3.6e-27 Score=209.51 Aligned_cols=175 Identities=21% Similarity=0.317 Sum_probs=130.4
Q ss_pred EEEecCCCCHHHHHHHHHhCCC--------CCCCcEEEeccccCCCCCcHHHHHHHHHHhHh---CCCcEEEECCCcccc
Q 021907 59 KICGDIHGQYSDLLRLFEYGGF--------PPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 127 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il~~~g~--------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~~lrGNHE~~ 127 (305)
+||||||||+++|.++|+.+++ .+.+.+||+||+||||+++.+++.+++.++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35688999999999999999999999999754 467899999999999
Q ss_pred chhhhccchH--HHHHHhc-----hhh---HHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCc
Q 021907 128 SINRIYGFYD--ECKRRFN-----VRL---WKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDS 197 (305)
Q Consensus 128 ~~~~~~gf~~--e~~~~~~-----~~~---~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~ 197 (305)
.++..+.+.. ....... ..+ ...+.+|++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 8875543321 1111111 112 234478999999999876 68899999932
Q ss_pred hhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecC
Q 021907 198 GLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSA 268 (305)
Q Consensus 198 ~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 268 (305)
+|++.-.... .+.+ =+...++++++.++.+++|+||++++.|....+++++++|.+.
T Consensus 140 ------~w~r~y~~~~---~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 ------LWYRGYSKET---SDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred ------HHhhHhhhhh---hhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 3322110000 0000 0125688999999999999999999988766899999999884
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=2e-26 Score=209.48 Aligned_cols=203 Identities=20% Similarity=0.283 Sum_probs=133.4
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC---------CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP---------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~---------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~ 126 (305)
|+++||||||||++.|.++|+++++. ..+++|||||||||||+|.||+.+++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57999999999999999999998873 46789999999999999999999998884 46689999999998
Q ss_pred cchhhhccc-------hHHHHHHh-------chhhHHhhhhhcccCCeEEEEc-CcEEEecCCcCCCCCCHHHhhcCCCC
Q 021907 127 ASINRIYGF-------YDECKRRF-------NVRLWKIFTDCFNCLPVAALID-DKILCMHGGLSPDLINLDQIRKLPRP 191 (305)
Q Consensus 127 ~~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~~~~l~~i~~i~r~ 191 (305)
+.++...+- ..+....| ...+.+.+.+|++++|++..++ ++++|||||+.|.... ++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~--------~~ 150 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIG--------RQ 150 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcc--------cc
Confidence 876543210 11112222 1346778899999999998774 5799999999885311 11
Q ss_pred CCCCCchhHHHHHhcCCCCCCC---CcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecC
Q 021907 192 TDVPDSGLLCDLLWSDPGRDVK---GWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSA 268 (305)
Q Consensus 192 ~~~~~~~~~~dllWsdP~~~~~---~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 268 (305)
.......++|++-..... .|.. + .|-. ...|.+.+|.||+++..... .++.+-|-+.
T Consensus 151 ----~~~~~~~~l~~~~~~~~~~~~~~~~--~----~~~~-------~~~g~~~vV~GHtp~~~~~~---~~~~i~IDtG 210 (245)
T PRK13625 151 ----DKKVQTFVLYGDITGEKHPDGSPVR--R----DWAK-------EYKGTAWIVYGHTPVKEPRF---VNHTVNIDTG 210 (245)
T ss_pred ----hhhhhhHHhhccccCCcCCCCCeee--e----ccch-------hcCCCcEEEECCCCCcccee---cCCeEEEECc
Confidence 112334566764221100 0000 0 0100 01245679999999864332 2346778887
Q ss_pred CCCCCCCCCeEEEEEEcCCCceEE
Q 021907 269 PNYCGEFDNSGAMMSVDDSLMCSF 292 (305)
Q Consensus 269 ~~y~~~~~n~ga~l~i~~~~~~~~ 292 (305)
.-|. +.=+.+.+.+...++.
T Consensus 211 a~~g----G~Ltal~l~~~~~~~v 230 (245)
T PRK13625 211 CVFG----GRLTALRYPEMETVSV 230 (245)
T ss_pred CccC----CEEEEEECCCCcEEEE
Confidence 6442 3334455555443333
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=9.2e-25 Score=201.41 Aligned_cols=219 Identities=18% Similarity=0.292 Sum_probs=144.6
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhcc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 134 (305)
|+++||||||||++.|.++|++.++. ..+.++|+||+|||||+|.||+.++..+ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999998874 5688999999999999999999999877 457999999999988776555
Q ss_pred ch-----HHHHHHhchhhHHhhhhhcccCCeEEEE-cCcEEEecCCcCCCCCCHHHh---hcCCCCCCCCCc-hhHHHHH
Q 021907 135 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALI-DDKILCMHGGLSPDLINLDQI---RKLPRPTDVPDS-GLLCDLL 204 (305)
Q Consensus 135 f~-----~e~~~~~~~~~~~~~~~~f~~LPl~~~i-~~~il~vHgGi~p~~~~l~~i---~~i~r~~~~~~~-~~~~dll 204 (305)
.. +.+.........+.+.+|++++|+...+ ++++++||||++|.+...+.+ ++++..+..++. .....+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 43 1222222334456688999999999886 558999999999987422211 111122222222 3455555
Q ss_pred hcCCCCCCCCcccCCCCc-ccccCHHHHH--HHHHhCC-----------------------------CcEEEEeeeeecC
Q 021907 205 WSDPGRDVKGWGMNDRGV-SYTFGPDTVA--EFLLKND-----------------------------MDLVCRAHQVVED 252 (305)
Q Consensus 205 WsdP~~~~~~~~~~~rg~-~~~fg~~~~~--~fl~~~~-----------------------------l~~iIRgH~~~~~ 252 (305)
|+.|. .|.++-.|. ...|.-.++. +||...| -..||-||.+.-.
T Consensus 157 ~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~ 232 (275)
T PRK00166 157 GNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALE 232 (275)
T ss_pred CCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccC
Confidence 55553 233332221 1122222221 1232222 3479999999877
Q ss_pred CeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCC
Q 021907 253 GYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSL 288 (305)
Q Consensus 253 G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~ 288 (305)
|... ...++.+-+..-+. +.=..+.++...
T Consensus 233 G~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~~ 262 (275)
T PRK00166 233 GLTT--PPNIIALDTGCVWG----GKLTALRLEDKQ 262 (275)
T ss_pred CccC--CCCeEEeecccccC----CeEEEEEeCCCc
Confidence 8765 45688888877552 344556776543
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=1.7e-24 Score=194.24 Aligned_cols=115 Identities=24% Similarity=0.410 Sum_probs=91.5
Q ss_pred EEEecCCCCHHHHHHHHHhCCCC--------CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchh
Q 021907 59 KICGDIHGQYSDLLRLFEYGGFP--------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 130 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il~~~g~~--------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 130 (305)
+||||||||++.|.++|+..++. +.+++|||||||||||+|.+|+.+++.+. .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 69999999999999999998774 46789999999999999999999999985 345899999999998764
Q ss_pred hhcc------ch-----------HHHHHHh--chhhHHhhhhhcccCCeEEEEcCcEEEecCCcC
Q 021907 131 RIYG------FY-----------DECKRRF--NVRLWKIFTDCFNCLPVAALIDDKILCMHGGLS 176 (305)
Q Consensus 131 ~~~g------f~-----------~e~~~~~--~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~ 176 (305)
...+ +. .+..+.+ ..+..+...+||++||++... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 2211 00 1222222 134567888999999999886 57999999986
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=2.3e-24 Score=194.58 Aligned_cols=120 Identities=26% Similarity=0.509 Sum_probs=97.0
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCC----------CCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFPP----------KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~~----------~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE 125 (305)
||+.||||||||+.+|.++|+++++.+ .+++||||||||||++|.||+.+|+.++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999997753 46899999999999999999999998864 357999999999
Q ss_pred ccchhhhc--------cchHHHHHHh---chhhHHhhhhhcccCCeEEEEc-CcEEEecCCcCCC
Q 021907 126 CASINRIY--------GFYDECKRRF---NVRLWKIFTDCFNCLPVAALID-DKILCMHGGLSPD 178 (305)
Q Consensus 126 ~~~~~~~~--------gf~~e~~~~~---~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~ 178 (305)
.+.++... |+.. ....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 98765422 2222 12222 2456778889999999998876 4799999998874
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=1.6e-24 Score=197.98 Aligned_cols=119 Identities=28% Similarity=0.401 Sum_probs=99.1
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccch
Q 021907 58 IKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (305)
Q Consensus 58 i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 136 (305)
++||||||||+++|+++|++.++. +.++++|+||||||||+|.||+.+++.++ .++++|+||||.+.++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999875 57899999999999999999999999885 5799999999999887655543
Q ss_pred -----HHHHHHhchhhHHhhhhhcccCCeEEEEcC-cEEEecCCcCCCCC
Q 021907 137 -----DECKRRFNVRLWKIFTDCFNCLPVAALIDD-KILCMHGGLSPDLI 180 (305)
Q Consensus 137 -----~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~ 180 (305)
+...+.+.....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 122222233445678899999999998865 89999999999873
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=1.8e-24 Score=198.37 Aligned_cols=121 Identities=23% Similarity=0.358 Sum_probs=102.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhcc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 134 (305)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|+||+.++.++. .++++|+||||.+.++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999875 46889999999999999999999998874 46889999999998887766
Q ss_pred ch-----HHHHHHhchhhHHhhhhhcccCCeEEEEc-CcEEEecCCcCCCCC
Q 021907 135 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALID-DKILCMHGGLSPDLI 180 (305)
Q Consensus 135 f~-----~e~~~~~~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~~~ 180 (305)
+. +.....+.....+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 33334445567788899999999998764 369999999999873
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.89 E-value=2.8e-23 Score=185.71 Aligned_cols=116 Identities=25% Similarity=0.315 Sum_probs=89.3
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhc
Q 021907 55 AAPIKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 133 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~ 133 (305)
.++++||||||||+++|.++|+.+++. ..++++||||+|||||+|.||+.++... +++.|+||||.+.++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 358999999999999999999999886 5688999999999999999999998652 588999999998776432
Q ss_pred cchH--------HHHHHh---chhhHHhhhhhcccCCeEEEEc---CcEEEecCCcC
Q 021907 134 GFYD--------ECKRRF---NVRLWKIFTDCFNCLPVAALID---DKILCMHGGLS 176 (305)
Q Consensus 134 gf~~--------e~~~~~---~~~~~~~~~~~f~~LPl~~~i~---~~il~vHgGi~ 176 (305)
+-.. +....+ ..+.+..+.+|+++||+...+. +++++||||++
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 1100 000011 1234456678999999998763 46999999974
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.88 E-value=1.6e-22 Score=179.18 Aligned_cols=168 Identities=26% Similarity=0.327 Sum_probs=114.9
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhcc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 134 (305)
++++||||||||+.+|.++++..++. ..+.++|+||+||||+++.|++.++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998874 468899999999999999999998865 36899999999988765433
Q ss_pred c--hHHHHHHh---------chhhHHhhhhhcccCCeEEEEc---CcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhH
Q 021907 135 F--YDECKRRF---------NVRLWKIFTDCFNCLPVAALID---DKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLL 200 (305)
Q Consensus 135 f--~~e~~~~~---------~~~~~~~~~~~f~~LPl~~~i~---~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 200 (305)
- ..+..... ..++++...+||++||+...++ .++++||||+++... ...+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 1 11111111 1224566788999999999875 369999999865431 111100 01122334
Q ss_pred HHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCe
Q 021907 201 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGY 254 (305)
Q Consensus 201 ~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~ 254 (305)
.+++|++|...... +...-+.+.||.||++.+.-+
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~ 183 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPL 183 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcce
Confidence 56888876421000 000114578999999987543
No 29
>PHA02239 putative protein phosphatase
Probab=99.88 E-value=3e-22 Score=180.95 Aligned_cols=174 Identities=22% Similarity=0.292 Sum_probs=120.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC--CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 133 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~ 133 (305)
|++++||||||+++.|.++++..... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.+.+....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987532 46889999999999999999999998874 3566899999999997553211
Q ss_pred c----------ch----HHHHHHhc-------------------------------hhhHHhhhhhcccCCeEEEEcCcE
Q 021907 134 G----------FY----DECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALIDDKI 168 (305)
Q Consensus 134 g----------f~----~e~~~~~~-------------------------------~~~~~~~~~~f~~LPl~~~i~~~i 168 (305)
+ +. .+....|+ ...+..+..|+++||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 0 00 11112221 11234556699999999886 489
Q ss_pred EEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeee
Q 021907 169 LCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQ 248 (305)
Q Consensus 169 l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~ 248 (305)
+|||||+.|... +++ ....+++|.+. . .+ ...=+.+|.||+
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~-------------------~~~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QP-------------------RKDGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CC-------------------CCCCcEEEECCC
Confidence 999999988632 221 12468899875 2 11 011247899999
Q ss_pred eecCCeEEecCCeEEEEecCCCC
Q 021907 249 VVEDGYEFFADRQLVTIFSAPNY 271 (305)
Q Consensus 249 ~~~~G~~~~~~~~~iTifSa~~y 271 (305)
++..+..... ++.|.|-...-|
T Consensus 200 p~~~~~~~~~-~~~I~IDtGa~~ 221 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVGAVF 221 (235)
T ss_pred CCCCCccccc-CCEEEeecCccc
Confidence 9876543332 345677775533
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.87 E-value=9.2e-22 Score=181.04 Aligned_cols=188 Identities=22% Similarity=0.254 Sum_probs=124.7
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCC------CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCC-cEEEECCCccccch
Q 021907 57 PIKICGDIHGQYSDLLRLFEYGGF------PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASI 129 (305)
Q Consensus 57 ~i~viGDiHG~~~~L~~il~~~g~------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~-~v~~lrGNHE~~~~ 129 (305)
++++||||||+++.|.++|+.... +..+.+|||||||||||+|.+|+.+|++++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 689999999999999999986532 12457999999999999999999999999988876 68999999997644
Q ss_pred hhhcc---------ch------------------------------------------------------HHHHHHhc--
Q 021907 130 NRIYG---------FY------------------------------------------------------DECKRRFN-- 144 (305)
Q Consensus 130 ~~~~g---------f~------------------------------------------------------~e~~~~~~-- 144 (305)
..... |. .+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 21110 00 11222332
Q ss_pred -------hhhHHhhhhhcccCCeEEEEcCcE-------------EEecCCcCCCCCCHHHhhcCC-CCCCCCCchhHHHH
Q 021907 145 -------VRLWKIFTDCFNCLPVAALIDDKI-------------LCMHGGLSPDLINLDQIRKLP-RPTDVPDSGLLCDL 203 (305)
Q Consensus 145 -------~~~~~~~~~~f~~LPl~~~i~~~i-------------l~vHgGi~p~~~~l~~i~~i~-r~~~~~~~~~~~dl 203 (305)
..+.+...+|++.||.....+ ++ +|||||+.|...--+|.+.+. +-...|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 234566779999999998754 55 899999999876555555432 1122222 277
Q ss_pred HhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCC
Q 021907 204 LWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCG 273 (305)
Q Consensus 204 lWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~ 273 (305)
||.+.... ..++. + ...=.+||-||+. +....+.-|.|-+...|.+
T Consensus 238 l~~R~~f~-----~~~~~----~----------~~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 238 LSGRKNVW-----NIPQE----L----------ADKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFDD 283 (304)
T ss_pred cccchhhh-----cCccc----c----------cCCCeEEEECCCC-----CceecCCEEEEECCCCcCC
Confidence 77765420 11111 0 0012678999992 2344444566777776643
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.85 E-value=3.7e-21 Score=172.13 Aligned_cols=115 Identities=26% Similarity=0.309 Sum_probs=86.1
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhcc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 134 (305)
.+++||||||||+++|+++|+...+. ..++++|+||||||||+|.|++.++.. .+++.||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998854 568899999999999999999998754 26899999999987753311
Q ss_pred ch-H-------HHHHHhc---hhhHHhhhhhcccCCeEEEEc---CcEEEecCCcC
Q 021907 135 FY-D-------ECKRRFN---VRLWKIFTDCFNCLPVAALID---DKILCMHGGLS 176 (305)
Q Consensus 135 f~-~-------e~~~~~~---~~~~~~~~~~f~~LPl~~~i~---~~il~vHgGi~ 176 (305)
-. . +....+. .........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 0 0001111 112334456899999998764 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.47 E-value=5.2e-13 Score=109.48 Aligned_cols=159 Identities=25% Similarity=0.275 Sum_probs=103.3
Q ss_pred CcEEEEecCCCCHHHH----HHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHH--HHHhHhCCCcEEEECCCccccch
Q 021907 56 APIKICGDIHGQYSDL----LRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASI 129 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L----~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll--~~lk~~~p~~v~~lrGNHE~~~~ 129 (305)
++++++||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 44444444456688999999999999988877665 55566678899999999999765
Q ss_pred hhhccchHHHHH----------------------------------HhchhhHHhhhhhcccCCeEEEEcCcEEEecCCc
Q 021907 130 NRIYGFYDECKR----------------------------------RFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGL 175 (305)
Q Consensus 130 ~~~~gf~~e~~~----------------------------------~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi 175 (305)
...+........ ............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 443222111110 0011111122222222333344455799999998
Q ss_pred CCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeee
Q 021907 176 SPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVV 250 (305)
Q Consensus 176 ~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~ 250 (305)
.+....-... .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 8653222111 12345678899999999999999999853
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.25 E-value=3.8e-10 Score=94.89 Aligned_cols=84 Identities=25% Similarity=0.322 Sum_probs=63.7
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccch
Q 021907 57 PIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (305)
Q Consensus 57 ~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 136 (305)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998654 688999999999998765 1 123469999999997532
Q ss_pred HHHHHHhchhhHHhhhhhcccCCeEEEE--cC-cEEEecCCcCC
Q 021907 137 DECKRRFNVRLWKIFTDCFNCLPVAALI--DD-KILCMHGGLSP 177 (305)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPl~~~i--~~-~il~vHgGi~p 177 (305)
+..+|....+ ++ +++++||...+
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~ 87 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLYG 87 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCcccc
Confidence 3455644443 32 79999997643
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.25 E-value=1.2e-10 Score=97.13 Aligned_cols=152 Identities=22% Similarity=0.305 Sum_probs=91.5
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 135 (305)
|+++++||+|++...+.++++.+ ...+.++++||++++ .+++..+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999987 346789999999993 6766666444 59999999996543222110
Q ss_pred hHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCc
Q 021907 136 YDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGW 215 (305)
Q Consensus 136 ~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~ 215 (305)
+. +.+..... .-..+++++||....
T Consensus 69 ----------~~------~~~~~~~~-~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 ----------EY------LLDALRLT-IDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp ----------CS------SHSEEEEE-ETTEEEEEESSTSSS--------------------------------------
T ss_pred ----------cc------cccceeee-ecCCeEEEECCCCcc--------------------------------------
Confidence 00 11111111 113489999996654
Q ss_pred ccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEc
Q 021907 216 GMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVD 285 (305)
Q Consensus 216 ~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~ 285 (305)
...+.+.+.+.+...+.++++.||.-.+.-.+ ..+..+++.=|..... .+...+++.++
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 01345567777889999999999987643322 3344455544433222 12245555443
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.18 E-value=7.4e-10 Score=93.79 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=49.1
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCC-CCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
|++.|+||+||+..++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 68999999999998877776665544 568899999998 456776665442 3599999999973
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=99.18 E-value=1e-10 Score=101.41 Aligned_cols=68 Identities=22% Similarity=0.325 Sum_probs=55.1
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCC--------cHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~--------s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
|++.|+||+||++.++.++++.+...+.+.++++||++|+|++ +.+++..+..+ +..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 6899999999999999999988755566899999999999874 45566555433 34699999999974
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.05 E-value=1.4e-09 Score=89.65 Aligned_cols=118 Identities=19% Similarity=0.179 Sum_probs=78.9
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcH--HHHHHHHHHhHhCCCcEEEECCCccccchhhhcc
Q 021907 57 PIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (305)
Q Consensus 57 ~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 134 (305)
++.++||+||++. .....+.+.++++||+++++..+. +.+.++..++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4799999999987 122345688999999999986432 2333333321 12 36789999996411
Q ss_pred chHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCC
Q 021907 135 FYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKG 214 (305)
Q Consensus 135 f~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~ 214 (305)
.-+.+++++||.+.+..... + +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~~~~----------------------~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHLDLV----------------------S--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCcccc----------------------c--c------
Confidence 11347899999543211000 0 0
Q ss_pred cccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeE
Q 021907 215 WGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYE 255 (305)
Q Consensus 215 ~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 255 (305)
....|.+.+.+++++.+.++++-||.-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567788999999999999999999988876
No 38
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.02 E-value=3.2e-10 Score=92.75 Aligned_cols=143 Identities=41% Similarity=0.669 Sum_probs=115.9
Q ss_pred hhhhccchHHHHHHhchh-hHHh---hhhhcccCCeEEEEcC-cEEEecCCcCCCC-CCHHHhhcCCCCC--CCCCchhH
Q 021907 129 INRIYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALIDD-KILCMHGGLSPDL-INLDQIRKLPRPT--DVPDSGLL 200 (305)
Q Consensus 129 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPl~~~i~~-~il~vHgGi~p~~-~~l~~i~~i~r~~--~~~~~~~~ 200 (305)
+...+++.+++...++.. .|.. ..++|+.+|+.+.+++ .++|.|++++|.+ ..+++++.+.|.. ...-.+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 345567777766666554 5666 8999999999999888 8999999999976 6777777776654 45555666
Q ss_pred HHHHhcCCCCC-CCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCC
Q 021907 201 CDLLWSDPGRD-VKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 272 (305)
Q Consensus 201 ~dllWsdP~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 272 (305)
.+.+|+++... ...|.++++|.+..| .+....|+..+..+.+.++|+....++...+.+..+|.||+++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 67799999863 678889999998887 788889998888888999999999999888776899999999986
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.93 E-value=6.1e-09 Score=94.19 Aligned_cols=156 Identities=21% Similarity=0.224 Sum_probs=94.2
Q ss_pred cEEEEecCCCCHHHHH-HHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhh---
Q 021907 57 PIKICGDIHGQYSDLL-RLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI--- 132 (305)
Q Consensus 57 ~i~viGDiHG~~~~L~-~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~--- 132 (305)
+++++|||||++.... +.++.. ..|.++++||+++. +.+++..+..+ |..++.++||||.......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 334332 34789999999864 46666655444 3469999999997543210
Q ss_pred c---------------------------------cc---------hHHHHHHhc-hhhHHhhhhhcccCCeEEEEcCcEE
Q 021907 133 Y---------------------------------GF---------YDECKRRFN-VRLWKIFTDCFNCLPVAALIDDKIL 169 (305)
Q Consensus 133 ~---------------------------------gf---------~~e~~~~~~-~~~~~~~~~~f~~LPl~~~i~~~il 169 (305)
+ +| ..++...|+ ....+.+...++.++.+.....+|+
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 00 124555553 3455666677777764433344799
Q ss_pred EecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCC----CcEEEE
Q 021907 170 CMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKND----MDLVCR 245 (305)
Q Consensus 170 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----l~~iIR 245 (305)
+.|++++-.....+ +|. ...|.+. +..+|...+.+.+++.. .++++-
T Consensus 152 iaH~~~~G~g~~~~-----------------------~~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLGSDAE-----------------------DPC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCCcccc-----------------------ccc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 99999875321111 111 1223321 12467667766665544 799999
Q ss_pred eeeeec
Q 021907 246 AHQVVE 251 (305)
Q Consensus 246 gH~~~~ 251 (305)
||--..
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 996543
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.92 E-value=1.5e-08 Score=91.13 Aligned_cols=71 Identities=10% Similarity=0.143 Sum_probs=58.1
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
+++.++||+||++..+.++++.......|.+|++||++++|+..-++..++..+.. .+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 57999999999999999999876545568899999999999777777666666542 334699999999975
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.88 E-value=2.7e-08 Score=78.98 Aligned_cols=117 Identities=28% Similarity=0.360 Sum_probs=84.8
Q ss_pred EEEecCCCCHHHHHHHH--HhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccch
Q 021907 59 KICGDIHGQYSDLLRLF--EYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il--~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 136 (305)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33334455789999999999988877655533334456678999999999
Q ss_pred HHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcc
Q 021907 137 DECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWG 216 (305)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~ 216 (305)
++++|+.+.+........
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~~------------------------------- 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSPD------------------------------- 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhccc-------------------------------
Confidence 889999886532111000
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeE
Q 021907 217 MNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYE 255 (305)
Q Consensus 217 ~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 255 (305)
.......+...+.+.+.+.+|.||.-....+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00056678888999999999999998765554
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.79 E-value=3.2e-07 Score=79.66 Aligned_cols=59 Identities=19% Similarity=0.291 Sum_probs=42.7
Q ss_pred cEEEEecCC-CCHH-----HHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 57 PIKICGDIH-GQYS-----DLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 57 ~i~viGDiH-G~~~-----~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
.+.||||+| |.-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 5533 35555543 34578999999987 77777665542 2599999999974
No 43
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.76 E-value=3.3e-07 Score=83.00 Aligned_cols=212 Identities=16% Similarity=0.202 Sum_probs=107.8
Q ss_pred CcEEEEecCCCC------HHHHHHHHHhCCCCCCCcEEEeccccCC-------CCCcHHHHHHHHHHhHhCCCcEEEECC
Q 021907 56 APIKICGDIHGQ------YSDLLRLFEYGGFPPKANYLFLGDYVDR-------GKQSLETICLLLAYKIKYPENFFLLRG 122 (305)
Q Consensus 56 ~~i~viGDiHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDr-------G~~s~evl~ll~~lk~~~p~~v~~lrG 122 (305)
|++++++|+|.. ...+.+.++.. ....+.++++||++|. .+...+++.++..++. .+..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 689999999954 23455555432 1345789999999985 2234566666666642 3357999999
Q ss_pred CccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcC-cEEEecCCcCCCCC-CHHHhhcCCC-CC------C
Q 021907 123 NHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDD-KILCMHGGLSPDLI-NLDQIRKLPR-PT------D 193 (305)
Q Consensus 123 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~-~l~~i~~i~r-~~------~ 193 (305)
|||..... ...+..+. ..+.. |....+++ +++++||-..+.-. .....+.+-| |. .
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 143 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLA 143 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHh
Confidence 99974311 11111111 11111 33333444 69999998765321 1111222211 10 0
Q ss_pred CCCchhHHHH--HhcCCCCCCCCcccCC-CC-cccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCC
Q 021907 194 VPDSGLLCDL--LWSDPGRDVKGWGMND-RG-VSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAP 269 (305)
Q Consensus 194 ~~~~~~~~dl--lWsdP~~~~~~~~~~~-rg-~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~ 269 (305)
.|. .....+ -|+.-+. ..+. +. .-....++++.+.+++.+.+.+|.||.-.+.-.....++.-++-.+-+
T Consensus 144 ~p~-~~~~~ia~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lg 217 (241)
T PRK05340 144 LPL-SIRLRIAAKMRAKSK-----AANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLG 217 (241)
T ss_pred CCH-HHHHHHHHHHHHHHH-----HhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeC
Confidence 010 000000 0000000 0000 01 112335677889999999999999999875433333333112223333
Q ss_pred CCCCCCCCeEEEEEEcCCCceEEEEE
Q 021907 270 NYCGEFDNSGAMMSVDDSLMCSFQIL 295 (305)
Q Consensus 270 ~y~~~~~n~ga~l~i~~~~~~~~~~~ 295 (305)
+. .+.+.++.++++. ++++.+
T Consensus 218 dw----~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 218 DW----HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred CC----CCCCeEEEEECCc-eEEEeC
Confidence 33 1237778887763 444433
No 44
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.71 E-value=1.7e-07 Score=80.48 Aligned_cols=65 Identities=23% Similarity=0.238 Sum_probs=46.5
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCc-HHHHHHHHHHhHhCCCcEEEECCCccccc
Q 021907 58 IKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 128 (305)
Q Consensus 58 i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s-~evl~ll~~lk~~~p~~v~~lrGNHE~~~ 128 (305)
|+++||+||++..+.. ......+.|.+|+.||++++|... .+.+..+. ..+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999998876 323334568899999999998763 23222222 23556999999999753
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.70 E-value=5.3e-08 Score=82.85 Aligned_cols=67 Identities=25% Similarity=0.259 Sum_probs=48.0
Q ss_pred EEEEecCCCCHHHHHHHH-HhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 58 IKICGDIHGQYSDLLRLF-EYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 58 i~viGDiHG~~~~L~~il-~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
+.++||+|++.......+ +.......+.++++||+++++....... ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 468999999988776655 2233345678999999999987665543 221 223456799999999985
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.59 E-value=6.4e-07 Score=73.62 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=74.3
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHH
Q 021907 59 KICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 138 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 138 (305)
.|+||+||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998877776665 35568899999973 3445555544 1335899999999
Q ss_pred HHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcccC
Q 021907 139 CKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMN 218 (305)
Q Consensus 139 ~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~ 218 (305)
-+++++|+-+.+.. . .+.
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-~------------------------~~~---------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-D------------------------GED---------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-C------------------------ccc----------
Confidence 37899998432100 0 000
Q ss_pred CCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeE
Q 021907 219 DRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYE 255 (305)
Q Consensus 219 ~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 255 (305)
...-|.+++.+++++.+.+.++-||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011356778889999999999999998876665
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.53 E-value=1.3e-06 Score=78.76 Aligned_cols=205 Identities=16% Similarity=0.162 Sum_probs=102.0
Q ss_pred EEEEecCCCCH------HHHHHHHHhCCCCCCCcEEEeccccCCC-----CC--cHHHHHHHHHHhHhCCCcEEEECCCc
Q 021907 58 IKICGDIHGQY------SDLLRLFEYGGFPPKANYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNH 124 (305)
Q Consensus 58 i~viGDiHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDrG-----~~--s~evl~ll~~lk~~~p~~v~~lrGNH 124 (305)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++..++..|+. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234455544321 457899999999952 11 1344555555542 345799999999
Q ss_pred cccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEE-cCcEEEecCCcCCCC-CCHHHhhcCC-CCC------CCC
Q 021907 125 ECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI-DDKILCMHGGLSPDL-INLDQIRKLP-RPT------DVP 195 (305)
Q Consensus 125 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i-~~~il~vHgGi~p~~-~~l~~i~~i~-r~~------~~~ 195 (305)
|...-. ...+..+ ...+.. |....+ +.+++++||-.-..- ....-.+.+- .|. ..|
T Consensus 79 D~~~~~-------~~~~~~g-------i~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-------MTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCC-------CEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 0001111 111211 222233 358999999754311 1111112211 110 001
Q ss_pred -C-chhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCC
Q 021907 196 -D-SGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCG 273 (305)
Q Consensus 196 -~-~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~ 273 (305)
. ...+...+++..... .. ...-.-....++.+++.+++.+++++|.||+-.+.-+.+..++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0 112233344322110 00 0000112345678899999999999999999875444433333223444444442
Q ss_pred CCCCeEEEEEEcCC
Q 021907 274 EFDNSGAMMSVDDS 287 (305)
Q Consensus 274 ~~~n~ga~l~i~~~ 287 (305)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23556666654
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.46 E-value=3.6e-06 Score=69.64 Aligned_cols=117 Identities=23% Similarity=0.208 Sum_probs=73.3
Q ss_pred EEEEecCCCCHH------H----HHHHHHhCCCCCCCcEEEeccccCCCCCcH--HHHHHHHHHhHhCCCcEEEECCCcc
Q 021907 58 IKICGDIHGQYS------D----LLRLFEYGGFPPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHE 125 (305)
Q Consensus 58 i~viGDiHG~~~------~----L~~il~~~g~~~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~p~~v~~lrGNHE 125 (305)
++.++|+|=... . |.++++...-...+.++++||+++.|.... +...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899994211 1 222444444445688999999999987421 2223333332111 27999999999
Q ss_pred ccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHh
Q 021907 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLW 205 (305)
Q Consensus 126 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 205 (305)
. ++++|.-+.+....
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~------------------------ 94 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS------------------------ 94 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc------------------------
Confidence 7 78899866542100
Q ss_pred cCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeE
Q 021907 206 SDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYE 255 (305)
Q Consensus 206 sdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 255 (305)
+... . -+.+.+.+.+++.++++++.||.-.+..+.
T Consensus 95 ---------~~~~-----~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 ---------GRER-----L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ---------cccc-----C-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 0000 0 156678899999999999999998765544
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.37 E-value=2.1e-05 Score=70.05 Aligned_cols=194 Identities=18% Similarity=0.131 Sum_probs=97.8
Q ss_pred cEEEEecCCCC----HHHH----HHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHh--CCCcEEEECCCccc
Q 021907 57 PIKICGDIHGQ----YSDL----LRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIK--YPENFFLLRGNHEC 126 (305)
Q Consensus 57 ~i~viGDiHG~----~~~L----~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~--~p~~v~~lrGNHE~ 126 (305)
+++++||+|-- ...+ ..+.+...-...+.+|++||++|.+....+--.+...++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 58899999952 2223 33344433334578999999999998433221222222222 23458999999994
Q ss_pred cchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhc
Q 021907 127 ASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWS 206 (305)
Q Consensus 127 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWs 206 (305)
.. ...+... .+.++-+.+.++.-|- ..-++++|-=+.+.-...+ ..-|.
T Consensus 82 ~~-~ld~~~~--------~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~~------------------~~~~~ 130 (214)
T cd07399 82 VL-ALEFGPR--------DEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRPD------------------SIDYD 130 (214)
T ss_pred hh-hCCCCCC--------HHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcCc------------------ccccc
Confidence 32 2222111 1111112222222220 1246778874432110000 00000
Q ss_pred CCCCCCCCcccCCCCcccccCHHHHHHHHHhC-CCcEEEEeeeeecCCeEEe-----cCCeEEEEecCCCCCCCCCCeE-
Q 021907 207 DPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKN-DMDLVCRAHQVVEDGYEFF-----ADRQLVTIFSAPNYCGEFDNSG- 279 (305)
Q Consensus 207 dP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~l~~iIRgH~~~~~G~~~~-----~~~~~iTifSa~~y~~~~~n~g- 279 (305)
+ ...-+.+.+.+.++++ ++++++-||.-.. +.... .++.+..+.+........+|..
T Consensus 131 ~---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~ 194 (214)
T cd07399 131 S---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFL 194 (214)
T ss_pred c---------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceE
Confidence 0 1123556788889888 7999999997642 33322 2344665655332221112221
Q ss_pred EEEEEcCC-CceEEEEEcc
Q 021907 280 AMMSVDDS-LMCSFQILKP 297 (305)
Q Consensus 280 a~l~i~~~-~~~~~~~~~~ 297 (305)
.++.++++ ..+.+..|.|
T Consensus 195 r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 195 RLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEecCCCEEEEEeCCC
Confidence 35666766 4777777766
No 50
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.34 E-value=2.9e-05 Score=67.13 Aligned_cols=160 Identities=16% Similarity=0.137 Sum_probs=98.9
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccc
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 135 (305)
|++.|+||.||...+..+..+.......+.+|.+||++....... +.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~~-----l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLDA-----LEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchHH-----hhc---ccccceEEEEccCCCcccc-----
Confidence 689999999999976666666666667788999999997654221 111 0245799999999986432
Q ss_pred hHHHHHHhchhhHHhhhhhcccCCeE--EEEc-CcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCC
Q 021907 136 YDECKRRFNVRLWKIFTDCFNCLPVA--ALID-DKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDV 212 (305)
Q Consensus 136 ~~e~~~~~~~~~~~~~~~~f~~LPl~--~~i~-~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~ 212 (305)
..+|-. ..++ -+++++||..-..
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 122222 2334 4899999965420
Q ss_pred CCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEe--cCCCCCCCCCCeEEEEEEcCC-Cc
Q 021907 213 KGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIF--SAPNYCGEFDNSGAMMSVDDS-LM 289 (305)
Q Consensus 213 ~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTif--Sa~~y~~~~~n~ga~l~i~~~-~~ 289 (305)
......++.+-+..+++.+|.||+-.+ .++...+ ++-|- |.+.+-+ ++..+++.++.+ .+
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p-~~~~~~~--i~~vNPGS~s~pr~--~~~~sy~il~~~~~~ 157 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKP-VAEKVGG--ILLVNPGSVSGPRG--GNPASYAILDVDNLE 157 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcc-cEEEECC--EEEEcCCCcCCCCC--CCCcEEEEEEcCCCE
Confidence 022345677778888999999999875 3332222 22111 3333322 355455655544 56
Q ss_pred eEEEEEccCC
Q 021907 290 CSFQILKPTD 299 (305)
Q Consensus 290 ~~~~~~~~~~ 299 (305)
+....+....
T Consensus 158 ~~~~~~~~~~ 167 (172)
T COG0622 158 VEVLFLERDR 167 (172)
T ss_pred EEEEEeeccc
Confidence 6666665443
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.25 E-value=1.6e-06 Score=76.91 Aligned_cols=71 Identities=28% Similarity=0.238 Sum_probs=52.2
Q ss_pred CcEEEEecCCCCHH----HHHHHHHhCCCCCCCcEEEeccccCCCCCcH-HHHHHHHHHhHhCCCcEEEECCCccccc
Q 021907 56 APIKICGDIHGQYS----DLLRLFEYGGFPPKANYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 128 (305)
Q Consensus 56 ~~i~viGDiHG~~~----~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~-evl~ll~~lk~~~p~~v~~lrGNHE~~~ 128 (305)
+++++++|+|+... .+.++++.......+.+++.||++|.+.... +...++..++ .+..++.+.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 67999999998643 6677776655445578999999999987765 4444444432 3456999999999853
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.25 E-value=2.4e-06 Score=78.93 Aligned_cols=70 Identities=21% Similarity=0.082 Sum_probs=51.1
Q ss_pred CcEEEEecCCCC----HHHHHHHHHhCCCCCCCcEEEeccccCCC--CCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 56 APIKICGDIHGQ----YSDLLRLFEYGGFPPKANYLFLGDYVDRG--KQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 56 ~~i~viGDiHG~----~~~L~~il~~~g~~~~~~~vfLGD~VDrG--~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
.++++++|+|.. ...+.++++...-...|.++++||++|++ ....++...+..|+.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55677777765555568899999999953 2333455566666543 3599999999974
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.24 E-value=6e-05 Score=66.05 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=44.5
Q ss_pred CcEEEEecCCCCHH------------HHHHHHHhCCCCCCCcEEEeccccCCCCCc---HHHHHHHHHHhHhCCCcEEEE
Q 021907 56 APIKICGDIHGQYS------------DLLRLFEYGGFPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLL 120 (305)
Q Consensus 56 ~~i~viGDiHG~~~------------~L~~il~~~g~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~~v~~l 120 (305)
.++.+++|+|-... .+..+.+.......+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996221 122222222223457899999999977653 455555444333345569999
Q ss_pred CCCcc
Q 021907 121 RGNHE 125 (305)
Q Consensus 121 rGNHE 125 (305)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.11 E-value=0.00012 Score=67.48 Aligned_cols=71 Identities=15% Similarity=0.054 Sum_probs=48.5
Q ss_pred cCcEEEEecCC-C-----------CHHHHHHHHHhCCC--CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEE
Q 021907 55 AAPIKICGDIH-G-----------QYSDLLRLFEYGGF--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 120 (305)
Q Consensus 55 ~~~i~viGDiH-G-----------~~~~L~~il~~~g~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~l 120 (305)
.++++.|+|+| . ....|.++++.+.. +..+.+|+.||+++.|. .+-+..+...-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 36799999999 1 24567777776532 34578999999999874 333333333323345679999
Q ss_pred CCCcccc
Q 021907 121 RGNHECA 127 (305)
Q Consensus 121 rGNHE~~ 127 (305)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 55
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.04 E-value=1.1e-05 Score=73.02 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=48.5
Q ss_pred cEEEEecCCCCH------HHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 57 PIKICGDIHGQY------SDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 57 ~i~viGDiHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
++.+++|+|+++ ..+.++++.+.-...+.+|+.||++++.+.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999753 23556666554445688999999999876665555544442 345699999999974
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.94 E-value=0.00026 Score=64.60 Aligned_cols=71 Identities=13% Similarity=-0.003 Sum_probs=43.9
Q ss_pred cEEEEecCCCCH----------------HHHHHHHHhCCC--CCCCcEEEeccccCCCCCcH---HHHHHH-HHHhHh-C
Q 021907 57 PIKICGDIHGQY----------------SDLLRLFEYGGF--PPKANYLFLGDYVDRGKQSL---ETICLL-LAYKIK-Y 113 (305)
Q Consensus 57 ~i~viGDiHG~~----------------~~L~~il~~~g~--~~~~~~vfLGD~VDrG~~s~---evl~ll-~~lk~~-~ 113 (305)
+++++||+|-.. ..|.++++.+.. +..+.++++||+++.|.... +....+ ..++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 478889988753 234555555432 24567899999999887542 112222 222211 2
Q ss_pred CCcEEEECCCcccc
Q 021907 114 PENFFLLRGNHECA 127 (305)
Q Consensus 114 p~~v~~lrGNHE~~ 127 (305)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 57
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.93 E-value=0.0028 Score=56.65 Aligned_cols=211 Identities=16% Similarity=0.168 Sum_probs=119.5
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEecccc--CCCCCcHHHHHH-HHHHhHhCCCcEEEECCCccccchhh
Q 021907 55 AAPIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASINR 131 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~V--DrG~~s~evl~l-l~~lk~~~p~~v~~lrGNHE~~~~~~ 131 (305)
.|++..+.|+||..+.+.+++..+.....+.+++.||+. +.|+.-.-.-.. +..++ .....|+.++||.|...+..
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 478999999999999999999988877778899999999 877643222211 23332 24457999999988765432
Q ss_pred hccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCC------CHHHhhcCCCCCCCCCchhH-HHHH
Q 021907 132 IYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLI------NLDQIRKLPRPTDVPDSGLL-CDLL 204 (305)
Q Consensus 132 ~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~------~l~~i~~i~r~~~~~~~~~~-~dll 204 (305)
. ....+..+. +-...+++--||-=||..|... +-++|....+..-....... --++
T Consensus 82 ~-------l~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 V-------LKNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred H-------HHhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 1 111111111 1233444334444477765431 22333222111000000000 0000
Q ss_pred hcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEE
Q 021907 205 WSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSV 284 (305)
Q Consensus 205 WsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i 284 (305)
-+-|-...-. ++-| -..-|..+++++.++.+-.+.|.||=--..|+..-.+ ||+-.|.-.+ .-+.|++.+
T Consensus 145 HaPP~gt~~d---~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 145 HAPPYGTLLD---TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred cCCCCCcccc---CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEe
Confidence 0111110000 1112 1345899999999999999999999777788876544 5666664432 356788888
Q ss_pred cCCCceEEEE
Q 021907 285 DDSLMCSFQI 294 (305)
Q Consensus 285 ~~~~~~~~~~ 294 (305)
+++ .+...+
T Consensus 215 ~~~-~Vk~~~ 223 (226)
T COG2129 215 EKE-VVKLEQ 223 (226)
T ss_pred cCc-EEEEEE
Confidence 777 444433
No 58
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.92 E-value=3e-05 Score=71.26 Aligned_cols=73 Identities=21% Similarity=0.172 Sum_probs=49.7
Q ss_pred cEEEEecCC-C------------CHHHHHHHHHhCCCCCCCcEEEeccccCCCCC-cHHHHHHHHHHhHhCCCcEEEECC
Q 021907 57 PIKICGDIH-G------------QYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRG 122 (305)
Q Consensus 57 ~i~viGDiH-G------------~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~-s~evl~ll~~lk~~~p~~v~~lrG 122 (305)
++.++||+| + ....|.++++.+.....+.+|++||+++.|.. +.+-+..+...-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24566777766644446789999999998873 223344333333333457999999
Q ss_pred Cccccch
Q 021907 123 NHECASI 129 (305)
Q Consensus 123 NHE~~~~ 129 (305)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 59
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.92 E-value=2.6e-05 Score=71.33 Aligned_cols=72 Identities=22% Similarity=0.238 Sum_probs=49.1
Q ss_pred CcEEEEecCCC-C-----------HHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHH----HHHHHhHhCCCcEEE
Q 021907 56 APIKICGDIHG-Q-----------YSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETIC----LLLAYKIKYPENFFL 119 (305)
Q Consensus 56 ~~i~viGDiHG-~-----------~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~----ll~~lk~~~p~~v~~ 119 (305)
|+++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+... ++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 67999999993 2 2345555555444456889999999999876655433 333443333357999
Q ss_pred ECCCcccc
Q 021907 120 LRGNHECA 127 (305)
Q Consensus 120 lrGNHE~~ 127 (305)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 60
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.90 E-value=3.4e-05 Score=77.37 Aligned_cols=114 Identities=17% Similarity=0.219 Sum_probs=62.1
Q ss_pred cCcEEEEecCC-CCH----HHHHHHHHhCC-C--------CCCCcEEEeccccCC-CCCc---------------HHHHH
Q 021907 55 AAPIKICGDIH-GQY----SDLLRLFEYGG-F--------PPKANYLFLGDYVDR-GKQS---------------LETIC 104 (305)
Q Consensus 55 ~~~i~viGDiH-G~~----~~L~~il~~~g-~--------~~~~~~vfLGD~VDr-G~~s---------------~evl~ 104 (305)
+..+++++|+| |.- ..+..+++... . ...+.+|++||++|. |.++ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 45689999999 642 23444444322 1 233689999999995 3221 12333
Q ss_pred HHHHHhHhCCCcEEEECCCccccchhhhc-cchHHHHHHhchhhHHhhhhhcccCCeEEEEcC-cEEEecCCc
Q 021907 105 LLLAYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRFNVRLWKIFTDCFNCLPVAALIDD-KILCMHGGL 175 (305)
Q Consensus 105 ll~~lk~~~p~~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi 175 (305)
+|..+. ..-.|++++||||........ .+...+...+. ..-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~----~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFP----EHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcC----cCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 444332 234699999999976433221 12222211111 112344555 66555554 788999954
No 61
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.83 E-value=4.3e-05 Score=72.92 Aligned_cols=72 Identities=24% Similarity=0.337 Sum_probs=49.4
Q ss_pred CcEEEEecCC-C-----------CHHHHHHHHHhCCCCCCCcEEEeccccCCC-CCcHHHHHHHHH--Hh--HhCCCcEE
Q 021907 56 APIKICGDIH-G-----------QYSDLLRLFEYGGFPPKANYLFLGDYVDRG-KQSLETICLLLA--YK--IKYPENFF 118 (305)
Q Consensus 56 ~~i~viGDiH-G-----------~~~~L~~il~~~g~~~~~~~vfLGD~VDrG-~~s~evl~ll~~--lk--~~~p~~v~ 118 (305)
|+++.+||+| | ....|.++++.+.-...+.+++.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 4 234455666555445568899999999985 455555544433 21 12355799
Q ss_pred EECCCcccc
Q 021907 119 LLRGNHECA 127 (305)
Q Consensus 119 ~lrGNHE~~ 127 (305)
++.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 62
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.76 E-value=9.7e-05 Score=66.14 Aligned_cols=69 Identities=23% Similarity=0.272 Sum_probs=46.1
Q ss_pred cEEEEecCCCC------------HHHHHHHHHhCCC--CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECC
Q 021907 57 PIKICGDIHGQ------------YSDLLRLFEYGGF--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 122 (305)
Q Consensus 57 ~i~viGDiHG~------------~~~L~~il~~~g~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 122 (305)
++++++|+|=. ...|.++++.+.. ++.+.+|++||+++.|... ....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 58899999944 3456777776443 2567899999999987532 222222222223557999999
Q ss_pred Ccccc
Q 021907 123 NHECA 127 (305)
Q Consensus 123 NHE~~ 127 (305)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 63
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.75 E-value=0.00011 Score=63.01 Aligned_cols=67 Identities=25% Similarity=0.323 Sum_probs=43.4
Q ss_pred EEEEecCCCCHHHH---------------HHHHHhCC--CCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEE
Q 021907 58 IKICGDIHGQYSDL---------------LRLFEYGG--FPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 120 (305)
Q Consensus 58 i~viGDiHG~~~~L---------------~~il~~~g--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~l 120 (305)
+++|+|+|=....- .++++... ..+.+.+|++||++++|..+.. +.++.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 37889999654432 22233211 2346889999999999986543 333333 34579999
Q ss_pred CCCccccch
Q 021907 121 RGNHECASI 129 (305)
Q Consensus 121 rGNHE~~~~ 129 (305)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997543
No 64
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.72 E-value=0.00011 Score=64.79 Aligned_cols=68 Identities=22% Similarity=0.261 Sum_probs=38.5
Q ss_pred EEEecCCC---CHHH---HHHHHHhCCCCCCCcEEEeccccCCC-----C--Cc-HHHHHHHHHHhHhCCCcEEEECCCc
Q 021907 59 KICGDIHG---QYSD---LLRLFEYGGFPPKANYLFLGDYVDRG-----K--QS-LETICLLLAYKIKYPENFFLLRGNH 124 (305)
Q Consensus 59 ~viGDiHG---~~~~---L~~il~~~g~~~~~~~vfLGD~VDrG-----~--~s-~evl~ll~~lk~~~p~~v~~lrGNH 124 (305)
++|+|+|- ...+ +...++.......+.+|++||++|.- . .. .+.+..++.+ ...+..|+.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRL-ADRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHH-HHCCCeEEEECCCc
Confidence 48999992 2111 22222221113557899999999841 1 11 1222233332 23556899999999
Q ss_pred ccc
Q 021907 125 ECA 127 (305)
Q Consensus 125 E~~ 127 (305)
|..
T Consensus 80 D~~ 82 (217)
T cd07398 80 DFL 82 (217)
T ss_pred hHH
Confidence 975
No 65
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.69 E-value=0.0014 Score=60.63 Aligned_cols=70 Identities=16% Similarity=0.117 Sum_probs=42.0
Q ss_pred CcEEEEecCCC----CHHHHHHHHHhCCCCCCCcEEEeccccCCCCCc-----HHHHHHHHHHhHhCCCcEEEECCCccc
Q 021907 56 APIKICGDIHG----QYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 126 (305)
Q Consensus 56 ~~i~viGDiHG----~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lrGNHE~ 126 (305)
-+++|+||.|. ....+.++.+. ....+-++++||+++.+... -+.+..+-.+.. .-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLAS--YVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHh--cCCcEEcCccccc
Confidence 36899999995 33334444333 23457789999999654332 122222222222 2359999999998
Q ss_pred cch
Q 021907 127 ASI 129 (305)
Q Consensus 127 ~~~ 129 (305)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 66
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.66 E-value=0.00014 Score=62.36 Aligned_cols=57 Identities=19% Similarity=0.138 Sum_probs=33.9
Q ss_pred HHHHHHhCCCCCCCcEEEeccccCCCCCcH-HHHHHH-HHHhHhCCCcEEEECCCcccc
Q 021907 71 LLRLFEYGGFPPKANYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 71 L~~il~~~g~~~~~~~vfLGD~VDrG~~s~-evl~ll-~~lk~~~p~~v~~lrGNHE~~ 127 (305)
+.++.+.....+.+.+|++||++|...... +....+ .......+-.+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 344444443345688999999998654332 212111 111223455799999999975
No 67
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.65 E-value=0.00043 Score=58.70 Aligned_cols=47 Identities=26% Similarity=0.282 Sum_probs=29.9
Q ss_pred CCCcEEEeccccCCCCCcH-HHH-HHHHHHhHh---C-CCcEEEECCCccccc
Q 021907 82 PKANYLFLGDYVDRGKQSL-ETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 128 (305)
Q Consensus 82 ~~~~~vfLGD~VDrG~~s~-evl-~ll~~lk~~---~-p~~v~~lrGNHE~~~ 128 (305)
..+.+|++||++|.+.... +.. ..+..++.. . +-.++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4578999999999876432 222 222222222 1 346999999999743
No 68
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.63 E-value=5e-06 Score=80.95 Aligned_cols=238 Identities=14% Similarity=0.069 Sum_probs=159.6
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeccC----cEEEEecCCCCHHHHHHHHHhCCCCCCC-cEEEeccccCCCCCcHHH
Q 021907 28 QLSESEIRMLCTVSREIFLQQPNLLELAA----PIKICGDIHGQYSDLLRLFEYGGFPPKA-NYLFLGDYVDRGKQSLET 102 (305)
Q Consensus 28 ~~~~~~~~~l~~~a~~il~~e~~ll~~~~----~i~viGDiHG~~~~L~~il~~~g~~~~~-~~vfLGD~VDrG~~s~ev 102 (305)
.|...++..++.-+.+++..+|+...... -.+.++|.||.+.|+...++.- |... -|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 46778889999999999999998777632 3799999999999999988864 4433 499999999999999999
Q ss_pred HHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhch---hhHHhhhhhcccCC-eEEEEcCcEEEecCCcCCC
Q 021907 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV---RLWKIFTDCFNCLP-VAALIDDKILCMHGGLSPD 178 (305)
Q Consensus 103 l~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LP-l~~~i~~~il~vHgGi~p~ 178 (305)
+..+...+...|+...+.|++||+..+-..++|..+....++. .+...+.. ..++ ++....+.+ .-|.-+.-.
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~--~~~~~i~~~y~g~~-le~~kvt~e 168 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDE--EDMDLIESDYSGPV-LEDHKVTLE 168 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccc--ccccccccccCCcc-cccchhhHH
Confidence 9999999999999999999999999888888887776655521 22222221 1122 343333222 222211100
Q ss_pred C-------------------CC-HHHh----hcCCCCCCCCCchhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHH
Q 021907 179 L-------------------IN-LDQI----RKLPRPTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEF 234 (305)
Q Consensus 179 ~-------------------~~-l~~i----~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~f 234 (305)
. -+ +++. +.+..+.+. ..-.+..|+++......+....++.+...++.....|
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~---~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI---SVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe---ecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 0 00 0000 111111111 1344667888775544455556777777788888889
Q ss_pred HHhCCCcEEEEeeeee------------cCCeEEecC---CeEEEEecCCCCCC
Q 021907 235 LLKNDMDLVCRAHQVV------------EDGYEFFAD---RQLVTIFSAPNYCG 273 (305)
Q Consensus 235 l~~~~l~~iIRgH~~~------------~~G~~~~~~---~~~iTifSa~~y~~ 273 (305)
+...++.-+.+.|.-+ ..+|...++ +.++++|+.+.++.
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 9888888888888642 233333332 24899999998874
No 69
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.61 E-value=0.00013 Score=64.14 Aligned_cols=74 Identities=23% Similarity=0.277 Sum_probs=49.7
Q ss_pred cEEEEecCC-CC--------------HHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHh---CCCcEE
Q 021907 57 PIKICGDIH-GQ--------------YSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFF 118 (305)
Q Consensus 57 ~i~viGDiH-G~--------------~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~ 118 (305)
+++.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+...-.. .+-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 42 123666666655455678999999999887665544443332222 245799
Q ss_pred EECCCccccchh
Q 021907 119 LLRGNHECASIN 130 (305)
Q Consensus 119 ~lrGNHE~~~~~ 130 (305)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999976543
No 70
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.61 E-value=0.00013 Score=67.14 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=45.7
Q ss_pred EEEEecCCCCHHHHHHHHHh---CCCCCCCcEEEeccccCCCCC-cHHHH----------HHHHHH--hHhCCCcEEEEC
Q 021907 58 IKICGDIHGQYSDLLRLFEY---GGFPPKANYLFLGDYVDRGKQ-SLETI----------CLLLAY--KIKYPENFFLLR 121 (305)
Q Consensus 58 i~viGDiHG~~~~L~~il~~---~g~~~~~~~vfLGD~VDrG~~-s~evl----------~ll~~l--k~~~p~~v~~lr 121 (305)
|+|+||+||+++.+.+.++. -...+.+.+|++||+-..+.. ..+.+ ++.-.+ ....|-.++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999998765443 233567889999999654433 23222 111111 223566689999
Q ss_pred CCcccc
Q 021907 122 GNHECA 127 (305)
Q Consensus 122 GNHE~~ 127 (305)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999964
No 71
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.59 E-value=0.00015 Score=70.87 Aligned_cols=72 Identities=22% Similarity=0.279 Sum_probs=47.2
Q ss_pred CcEEEEecCC-CC-H------HH----HHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHH----HHHHHhHhCCCcEEE
Q 021907 56 APIKICGDIH-GQ-Y------SD----LLRLFEYGGFPPKANYLFLGDYVDRGKQSLETIC----LLLAYKIKYPENFFL 119 (305)
Q Consensus 56 ~~i~viGDiH-G~-~------~~----L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~----ll~~lk~~~p~~v~~ 119 (305)
|+++.++|+| |. + .+ |.++.+.+.....+.+|+.||++|++..+.+... ++..|+. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5789999999 32 1 11 3344444444556889999999999866554332 3334432 3456999
Q ss_pred ECCCccccc
Q 021907 120 LRGNHECAS 128 (305)
Q Consensus 120 lrGNHE~~~ 128 (305)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 72
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.53 E-value=0.0003 Score=63.35 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=43.5
Q ss_pred CcEEEEecCC-CCHHH----------------HHHHHHhCCCCCCCcEEEeccccCCCCCc---HHHHHHHHHHhHhCCC
Q 021907 56 APIKICGDIH-GQYSD----------------LLRLFEYGGFPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPE 115 (305)
Q Consensus 56 ~~i~viGDiH-G~~~~----------------L~~il~~~g~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~ 115 (305)
.++.||+|+| |--.. |.++.+.......+.+|++||+++..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 5799999999 64332 22333333333458899999999765543 2222333322 34
Q ss_pred cEEEECCCccccc
Q 021907 116 NFFLLRGNHECAS 128 (305)
Q Consensus 116 ~v~~lrGNHE~~~ 128 (305)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 73
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.46 E-value=0.00071 Score=68.26 Aligned_cols=65 Identities=20% Similarity=0.252 Sum_probs=46.0
Q ss_pred CHHHHHHHHHhCCCc----EEEEeeeeec--CCeEE-ecCCeEEEE---ecCCCCCCCCCCeEEEEEEcCCCceEEE
Q 021907 227 GPDTVAEFLLKNDMD----LVCRAHQVVE--DGYEF-FADRQLVTI---FSAPNYCGEFDNSGAMMSVDDSLMCSFQ 293 (305)
Q Consensus 227 g~~~~~~fl~~~~l~----~iIRgH~~~~--~G~~~-~~~~~~iTi---fSa~~y~~~~~n~ga~l~i~~~~~~~~~ 293 (305)
.++..++.|+..|++ .||-||.||. .|=.. .++||++.| ||.. |...++=+|-.| |.++-...+.
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~ 581 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLV 581 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceec
Confidence 467788899999998 9999999986 67553 589999999 6655 766555455444 4343333333
No 74
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.44 E-value=0.0013 Score=59.17 Aligned_cols=199 Identities=18% Similarity=0.216 Sum_probs=102.9
Q ss_pred EEEecCCCC------HHHHHHHHHhCCCCCCCcEEEeccccCC--CCC-c----HHHHHHHHHHhHhCCCcEEEECCCcc
Q 021907 59 KICGDIHGQ------YSDLLRLFEYGGFPPKANYLFLGDYVDR--GKQ-S----LETICLLLAYKIKYPENFFLLRGNHE 125 (305)
Q Consensus 59 ~viGDiHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDr--G~~-s----~evl~ll~~lk~~~p~~v~~lrGNHE 125 (305)
+.|+|+|=. .+.|.+.|+... +..+.+.++||++|- |.. . .+|...|..+ ...+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 368999954 444556666543 355789999999972 322 1 3334444333 346778999999999
Q ss_pred ccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEE---cCcEEEecCCcCCCC-CCHHHhhc-----------CCC
Q 021907 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---DDKILCMHGGLSPDL-INLDQIRK-----------LPR 190 (305)
Q Consensus 126 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i---~~~il~vHgGi~p~~-~~l~~i~~-----------i~r 190 (305)
...-+ . ++.+ ..-+.-+|-...+ +.+++++||-.--.. ......+. +..
T Consensus 79 fll~~-~----------f~~~-----~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FLLGK-R----------FAQE-----AGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HHHHH-H----------HHhh-----cCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 54221 1 1111 0112223333222 568999999653211 00000111 111
Q ss_pred CCCCCCchhHHHHHhcCCCCCCCCcccCCCCcc---cccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEec
Q 021907 191 PTDVPDSGLLCDLLWSDPGRDVKGWGMNDRGVS---YTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFS 267 (305)
Q Consensus 191 ~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifS 267 (305)
|+. -..-+..-+|+.- .|........ ....++++.+-++++|++.+|.||+-.+..-....-.+|.
T Consensus 143 ~l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~---- 211 (237)
T COG2908 143 PLR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN---- 211 (237)
T ss_pred HHH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe----
Confidence 110 0011122244443 1111111111 1246777888899999999999999876655443311111
Q ss_pred CCCCCCCCCCeEEEEEEcCCCce
Q 021907 268 APNYCGEFDNSGAMMSVDDSLMC 290 (305)
Q Consensus 268 a~~y~~~~~n~ga~l~i~~~~~~ 290 (305)
+|.--..|++++++.+...
T Consensus 212 ----lGdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGLE 230 (237)
T ss_pred ----cCcchhcceEEEEecCcEE
Confidence 1122256889998887543
No 75
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.42 E-value=0.00046 Score=67.35 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=57.7
Q ss_pred cCcEEEEecCCCC------------HHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHh----------
Q 021907 55 AAPIKICGDIHGQ------------YSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIK---------- 112 (305)
Q Consensus 55 ~~~i~viGDiHG~------------~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---------- 112 (305)
.+++++++|+|-- +..|.++++.+.-...|-+|+.||++|++.-|.+++..++.+-.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 3689999999942 567888888876666788999999999999998888665444322
Q ss_pred --------------------------CCCcEEEECCCccccc
Q 021907 113 --------------------------YPENFFLLRGNHECAS 128 (305)
Q Consensus 113 --------------------------~p~~v~~lrGNHE~~~ 128 (305)
..-.|+.+-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999864
No 76
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.40 E-value=0.00067 Score=61.85 Aligned_cols=74 Identities=20% Similarity=0.210 Sum_probs=53.0
Q ss_pred CcEEEEecCCCC------HHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHh--HhCCCcEEEECCCcccc
Q 021907 56 APIKICGDIHGQ------YSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYK--IKYPENFFLLRGNHECA 127 (305)
Q Consensus 56 ~~i~viGDiHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk--~~~p~~v~~lrGNHE~~ 127 (305)
++++.|+|+|-. ...+.++++.....+.|.+|+.||+.+.|. ..| ...+..+- ...|..+++++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~-~~~-~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE-PEE-YRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC-HHH-HHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468999999976 345566667777666699999999999953 222 23332222 35678899999999998
Q ss_pred chhh
Q 021907 128 SINR 131 (305)
Q Consensus 128 ~~~~ 131 (305)
..+.
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 7653
No 77
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.38 E-value=0.00037 Score=63.10 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=38.5
Q ss_pred EEEecCC--CCH---HHHHHHHHhC-CCC----CCCcEEEeccccCCCCC------------cHH----HHHHHHHHhHh
Q 021907 59 KICGDIH--GQY---SDLLRLFEYG-GFP----PKANYLFLGDYVDRGKQ------------SLE----TICLLLAYKIK 112 (305)
Q Consensus 59 ~viGDiH--G~~---~~L~~il~~~-g~~----~~~~~vfLGD~VDrG~~------------s~e----vl~ll~~lk~~ 112 (305)
++|+|+| +.. ..+..+++.. +.. ..+.+|++||++|+... ..+ +..++..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 331 2223333322 221 23789999999997310 011 222222222
Q ss_pred CCCcEEEECCCccccc
Q 021907 113 YPENFFLLRGNHECAS 128 (305)
Q Consensus 113 ~p~~v~~lrGNHE~~~ 128 (305)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2356999999999753
No 78
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.34 E-value=0.00048 Score=62.05 Aligned_cols=67 Identities=25% Similarity=0.237 Sum_probs=40.5
Q ss_pred EEEEecCCCC---------HH----HH-HHHHHhC--CCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEEC
Q 021907 58 IKICGDIHGQ---------YS----DL-LRLFEYG--GFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121 (305)
Q Consensus 58 i~viGDiHG~---------~~----~L-~~il~~~--g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lr 121 (305)
+++++|||-. +. ++ .++.+.+ -.++.|.+|+.||++++++.. +....+..++. .|..++.+.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999955 11 22 2232221 124568899999999887643 33233323332 244589999
Q ss_pred CCccc
Q 021907 122 GNHEC 126 (305)
Q Consensus 122 GNHE~ 126 (305)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 79
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.12 E-value=0.001 Score=60.81 Aligned_cols=70 Identities=23% Similarity=0.176 Sum_probs=41.7
Q ss_pred EEEEecCCCCH------HHH-HHHHHhCCCCCCCcEEEeccccCCCCCc-------HHHH-HHHHHHh---HhCCCcEEE
Q 021907 58 IKICGDIHGQY------SDL-LRLFEYGGFPPKANYLFLGDYVDRGKQS-------LETI-CLLLAYK---IKYPENFFL 119 (305)
Q Consensus 58 i~viGDiHG~~------~~L-~~il~~~g~~~~~~~vfLGD~VDrG~~s-------~evl-~ll~~lk---~~~p~~v~~ 119 (305)
++.++|+|-.. ... ..+++.+.....+.+|++||++|++... .+.. .++..++ ...+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 57789999621 112 2334444334457899999999976521 1111 2222222 223567999
Q ss_pred ECCCcccc
Q 021907 120 LRGNHECA 127 (305)
Q Consensus 120 lrGNHE~~ 127 (305)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 80
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.98 E-value=0.0023 Score=54.07 Aligned_cols=70 Identities=16% Similarity=0.110 Sum_probs=44.5
Q ss_pred EEEEecCCCC------------HHHHHHH-HHhC--CCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECC
Q 021907 58 IKICGDIHGQ------------YSDLLRL-FEYG--GFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 122 (305)
Q Consensus 58 i~viGDiHG~------------~~~L~~i-l~~~--g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 122 (305)
++++||+|=. .+....+ +... -..|+|.+.+|||+.-.-..-.+...++-+| |+++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 7889999843 3333322 2211 1246789999999986555444444444333 789999999
Q ss_pred Cccccchhh
Q 021907 123 NHECASINR 131 (305)
Q Consensus 123 NHE~~~~~~ 131 (305)
|||-.-...
T Consensus 82 NhDk~~~~~ 90 (186)
T COG4186 82 NHDKCHPMY 90 (186)
T ss_pred CCCCCcccc
Confidence 999765443
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.95 E-value=0.0021 Score=59.88 Aligned_cols=72 Identities=24% Similarity=0.221 Sum_probs=48.1
Q ss_pred CcEEEEecCCCCHHH--HHHHHHhCCCCCCCcEEEeccccCC-CCCcHH-HHHHHHHHhHhCCCcEEEECCCccccch
Q 021907 56 APIKICGDIHGQYSD--LLRLFEYGGFPPKANYLFLGDYVDR-GKQSLE-TICLLLAYKIKYPENFFLLRGNHECASI 129 (305)
Q Consensus 56 ~~i~viGDiHG~~~~--L~~il~~~g~~~~~~~vfLGD~VDr-G~~s~e-vl~ll~~lk~~~p~~v~~lrGNHE~~~~ 129 (305)
-+++-++|+|-.... ..+.+........|-+++.|||+|+ .+...+ ++..+..|+ .|-.++.+.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 358999999987555 2233333322333889999999996 555544 444455554 56679999999987543
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.70 E-value=0.0035 Score=52.95 Aligned_cols=119 Identities=20% Similarity=0.248 Sum_probs=80.4
Q ss_pred EEEecCCCCHHHHHHHHHhCC--CCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccch
Q 021907 59 KICGDIHGQYSDLLRLFEYGG--FPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il~~~g--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 136 (305)
.|+||+||+++.+.+-++... -.+-+-++++||+..-...+-+ +.-.+.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999987776532 1355889999999976655533 33333335567888999999997
Q ss_pred HHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCCCCCcc
Q 021907 137 DECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRDVKGWG 216 (305)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~ 216 (305)
+-.||++|.=+.. +...++.. .+.
T Consensus 69 ----------------------------~~DILlTh~wP~g-i~~~~~~~-------------------~~~-------- 92 (150)
T cd07380 69 ----------------------------GVDILLTSEWPKG-ISKLSKVP-------------------FEE-------- 92 (150)
T ss_pred ----------------------------CCCEEECCCCchh-hhhhCCCc-------------------ccc--------
Confidence 4479999974321 11111100 000
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCcEEEEeeeee
Q 021907 217 MNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVV 250 (305)
Q Consensus 217 ~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~ 250 (305)
.+..-|...+++++++..=++.+-||..+
T Consensus 93 -----~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 93 -----TLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred -----cccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 12235778999999999999999999753
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.68 E-value=0.0041 Score=53.53 Aligned_cols=47 Identities=26% Similarity=0.362 Sum_probs=30.7
Q ss_pred CCCcEEEeccccCCCCCcH--HHHHHHHHHhHhC--------CCcEEEECCCccccc
Q 021907 82 PKANYLFLGDYVDRGKQSL--ETICLLLAYKIKY--------PENFFLLRGNHECAS 128 (305)
Q Consensus 82 ~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~--------p~~v~~lrGNHE~~~ 128 (305)
..+.+|++||++|.+.... +....+..++..+ +-.++.+.||||...
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4578999999999887542 2222232222211 456999999999864
No 84
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.48 E-value=0.006 Score=53.73 Aligned_cols=46 Identities=20% Similarity=0.364 Sum_probs=33.8
Q ss_pred CCCcEEEeccccCCCCCc--HHHHHHHHHHhHhCC----CcEEEECCCcccc
Q 021907 82 PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 127 (305)
Q Consensus 82 ~~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~p----~~v~~lrGNHE~~ 127 (305)
..+.++|+||++|.|+.+ .+....+..++..++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457899999999999864 335666656554332 4689999999975
No 85
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.46 E-value=0.0047 Score=55.84 Aligned_cols=66 Identities=27% Similarity=0.300 Sum_probs=42.5
Q ss_pred cEEEEecCCCCH---------HHHHHHHHhCCCC-CCCcEEEeccccCCCCCcH-----HHHHHHHHHhHhCCCcEEEEC
Q 021907 57 PIKICGDIHGQY---------SDLLRLFEYGGFP-PKANYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 121 (305)
Q Consensus 57 ~i~viGDiHG~~---------~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~lr 121 (305)
+++.++|+||.+ ..+.++++...-. ++.-++..||+++..+.+. .++..+-.+ +..+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 578999999886 5566666665433 3345677999999877643 344444333 2233 456
Q ss_pred CCcccc
Q 021907 122 GNHECA 127 (305)
Q Consensus 122 GNHE~~ 127 (305)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999964
No 86
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.35 E-value=0.011 Score=57.17 Aligned_cols=74 Identities=22% Similarity=0.191 Sum_probs=53.8
Q ss_pred CcEEEEecCCCC-------------HHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCC---CcEEE
Q 021907 56 APIKICGDIHGQ-------------YSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP---ENFFL 119 (305)
Q Consensus 56 ~~i~viGDiHG~-------------~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p---~~v~~ 119 (305)
||+..++|+|=- +.+|..+++.+.-...|-+|.-||+.|++.-|.+++.++...-.+.. -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999943 44555556655555558899999999999999888777654432222 36999
Q ss_pred ECCCccccch
Q 021907 120 LRGNHECASI 129 (305)
Q Consensus 120 lrGNHE~~~~ 129 (305)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999998643
No 87
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.31 E-value=0.049 Score=49.99 Aligned_cols=24 Identities=8% Similarity=0.040 Sum_probs=21.3
Q ss_pred cCHHHHHHHHHhCCCcEEEEeeee
Q 021907 226 FGPDTVAEFLLKNDMDLVCRAHQV 249 (305)
Q Consensus 226 fg~~~~~~fl~~~~l~~iIRgH~~ 249 (305)
-.+++.++.|++.+-.+|.-||+-
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 378889999999999999999974
No 88
>PLN02533 probable purple acid phosphatase
Probab=95.95 E-value=0.01 Score=58.51 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=41.2
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcH--H-HHHHHHHHhHhCCCcEEEECCCccccc
Q 021907 55 AAPIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSL--E-TICLLLAYKIKYPENFFLLRGNHECAS 128 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~--e-vl~ll~~lk~~~p~~v~~lrGNHE~~~ 128 (305)
.-+++++||+|-. ......++.+.....+-++++||+++.+.+.. + ...++..+.... .++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 3468999999632 11223333333334577899999998654321 1 122222222223 4899999999863
No 89
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.88 E-value=0.0082 Score=53.92 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=44.3
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHH-------------------------HHHHHHh
Q 021907 56 APIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETI-------------------------CLLLAYK 110 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl-------------------------~ll~~lk 110 (305)
.++..++|.||+++.+.++.+.+.-...|-++|+||++-....+.|-. +-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 468999999999999999988766556788999999996544433322 2233322
Q ss_pred HhCCCcEEEECCCccccc
Q 021907 111 IKYPENFFLLRGNHECAS 128 (305)
Q Consensus 111 ~~~p~~v~~lrGNHE~~~ 128 (305)
-..+-.+++|+||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 345567999999999853
No 90
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.72 E-value=0.015 Score=53.64 Aligned_cols=66 Identities=21% Similarity=0.177 Sum_probs=38.9
Q ss_pred cEEEEecCCCCHH----------------HHHHHHHhCCCCCCCcEEE-eccccCCCCCc-----------HHHHHHHHH
Q 021907 57 PIKICGDIHGQYS----------------DLLRLFEYGGFPPKANYLF-LGDYVDRGKQS-----------LETICLLLA 108 (305)
Q Consensus 57 ~i~viGDiHG~~~----------------~L~~il~~~g~~~~~~~vf-LGD~VDrG~~s-----------~evl~ll~~ 108 (305)
+++.++|+||++. .+..+++.......+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 4788999999863 3555555543332333433 79999876522 224444444
Q ss_pred HhHhCCCcEEEECCCcccc
Q 021907 109 YKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 109 lk~~~p~~v~~lrGNHE~~ 127 (305)
+. + -++..||||..
T Consensus 82 ~g---~--d~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y--DAGTLGNHEFN 95 (277)
T ss_pred cC---C--CEEeecccCcc
Confidence 43 2 24556999963
No 91
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.65 E-value=0.39 Score=47.59 Aligned_cols=208 Identities=18% Similarity=0.219 Sum_probs=106.9
Q ss_pred cEEEEecCCC-CH----HHHHHHHHhCCCC----CCCc-EEEeccccCC-C-----------CCcHHHHHHHHHHhHhCC
Q 021907 57 PIKICGDIHG-QY----SDLLRLFEYGGFP----PKAN-YLFLGDYVDR-G-----------KQSLETICLLLAYKIKYP 114 (305)
Q Consensus 57 ~i~viGDiHG-~~----~~L~~il~~~g~~----~~~~-~vfLGD~VDr-G-----------~~s~evl~ll~~lk~~~p 114 (305)
.+++++|+|= .. +.+...++.++-+ +.-+ ++..||.||. | .+..|-...+-.+--.-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4799999995 32 2333344433332 2234 5667899994 2 122233333433333445
Q ss_pred C--cEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcC-cEEEecCCcCCCCCCHHHhhcCCCC
Q 021907 115 E--NFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDD-KILCMHGGLSPDLINLDQIRKLPRP 191 (305)
Q Consensus 115 ~--~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~-~il~vHgGi~p~~~~l~~i~~i~r~ 191 (305)
. .|++.+||||........-...+.. ..++...+-.|=.=|....+++ .++..|| .+++||...-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~----kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELI----KSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhh----cccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 5 5899999999865543322222221 2223333222333355555554 6788888 577886654333
Q ss_pred CCCCC--chhHHHHHhcCCCCCCCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCC
Q 021907 192 TDVPD--SGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAP 269 (305)
Q Consensus 192 ~~~~~--~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~ 269 (305)
..... .-+..-|.|.-=.....+..+ -..|.+| -|-=.---+.++.||+.. .|+....+.+++..+|.+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~kD---~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETKD---YLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccCCcC---ceeeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 22222 122223334332211111110 0111111 111112246788999998 799988888899888888
Q ss_pred CCCCCCCCeEEEEEEcCC
Q 021907 270 NYCGEFDNSGAMMSVDDS 287 (305)
Q Consensus 270 ~y~~~~~n~ga~l~i~~~ 287 (305)
.+. -.+-++.++..
T Consensus 448 ~qT----efqk~vni~p~ 461 (481)
T COG1311 448 EQT----EFQKMVNINPT 461 (481)
T ss_pred chh----ccceEEEecCc
Confidence 664 34555555543
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.61 E-value=0.027 Score=49.52 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=42.3
Q ss_pred ecCCCCHHHHHHHHHhCCC-CCCCcEEEeccccCCCCCcHHH-HHHHHHHhHhC---------------------CCcEE
Q 021907 62 GDIHGQYSDLLRLFEYGGF-PPKANYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFF 118 (305)
Q Consensus 62 GDiHG~~~~L~~il~~~g~-~~~~~~vfLGD~VDrG~~s~ev-l~ll~~lk~~~---------------------p~~v~ 118 (305)
=|++|+=.=|.++++.+-+ -..+.++||||++|.|--+-+- -......+..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 3557776667777765433 2447899999999987544332 23344443332 13579
Q ss_pred EECCCcccc
Q 021907 119 LLRGNHECA 127 (305)
Q Consensus 119 ~lrGNHE~~ 127 (305)
+|.||||--
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999984
No 93
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.07 E-value=0.054 Score=49.52 Aligned_cols=70 Identities=21% Similarity=0.236 Sum_probs=40.1
Q ss_pred cEEEEecCCCC--H--HHHHHHHH-hCCCCCCCcEEEecccc-CCCCCcH------HHHHHHHHHhHhCCCcEEEECCCc
Q 021907 57 PIKICGDIHGQ--Y--SDLLRLFE-YGGFPPKANYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNH 124 (305)
Q Consensus 57 ~i~viGDiHG~--~--~~L~~il~-~~g~~~~~~~vfLGD~V-DrG~~s~------evl~ll~~lk~~~p~~v~~lrGNH 124 (305)
+++++||.-.. . .++.+.+. .+.....+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998764 1 23333333 33324457799999997 4553221 222222221 11234699999999
Q ss_pred ccc
Q 021907 125 ECA 127 (305)
Q Consensus 125 E~~ 127 (305)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 976
No 94
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=94.75 E-value=1.3 Score=40.70 Aligned_cols=49 Identities=18% Similarity=0.301 Sum_probs=31.1
Q ss_pred CcEEEEeeeeecCCeEEec--CCeEEEEecCCCCCCCCCCeEEEEEEc-CCCceEEE
Q 021907 240 MDLVCRAHQVVEDGYEFFA--DRQLVTIFSAPNYCGEFDNSGAMMSVD-DSLMCSFQ 293 (305)
Q Consensus 240 l~~iIRgH~~~~~G~~~~~--~~~~iTifSa~~y~~~~~n~ga~l~i~-~~~~~~~~ 293 (305)
=+.++.|||+. -|.+... +++-+.+.|.|.|.. .|.++.++ +++++...
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPI 255 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEE
Confidence 46678899986 4655543 256677888898743 55555554 45665544
No 95
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.66 E-value=0.13 Score=46.62 Aligned_cols=101 Identities=21% Similarity=0.267 Sum_probs=58.0
Q ss_pred ccCcEEEEecCCCCHHHHH----------------HHHH-hCCCCCCCcEEEeccccCCCCCc-----HHHHHHHHHHhH
Q 021907 54 LAAPIKICGDIHGQYSDLL----------------RLFE-YGGFPPKANYLFLGDYVDRGKQS-----LETICLLLAYKI 111 (305)
Q Consensus 54 ~~~~i~viGDiHG~~~~L~----------------~il~-~~g~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~ 111 (305)
...++.||+|+|=-+.... +.++ ....-..+++|.+||+-+-.+.+ .++-.++-.++
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~- 96 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD- 96 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-
Confidence 3568999999996444332 2222 11122347899999999754432 33333333333
Q ss_pred hCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCC
Q 021907 112 KYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSP 177 (305)
Q Consensus 112 ~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p 177 (305)
.. .+++++||||...-....++- ...++... + ++++++||=-.+
T Consensus 97 ~~--evi~i~GNHD~~i~~~~~~~~------------------v~v~~~~~-i-~~~~~~HGh~~~ 140 (235)
T COG1407 97 ER--EVIIIRGNHDNGIEEILPGFN------------------VEVVDELE-I-GGLLFRHGHKEP 140 (235)
T ss_pred cC--cEEEEeccCCCccccccccCC------------------ceeeeeEE-e-cCEEEEeCCCCC
Confidence 22 599999999986443333221 12233332 3 589999996544
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.64 E-value=0.056 Score=49.32 Aligned_cols=66 Identities=23% Similarity=0.146 Sum_probs=40.0
Q ss_pred cEEEEecCCCCH----------HHHHHHHHhCCCCCCCcEEEeccccCCCCCc-----HHHHHHHHHHhHhCCCcEEEEC
Q 021907 57 PIKICGDIHGQY----------SDLLRLFEYGGFPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLR 121 (305)
Q Consensus 57 ~i~viGDiHG~~----------~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lr 121 (305)
+++-++|+||++ ..+..+++.....++.-++..||.++..+.+ ..++..+-.+ +-.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 477899999975 3455556554333445677799999876543 2233333332 2234 456
Q ss_pred CCcccc
Q 021907 122 GNHECA 127 (305)
Q Consensus 122 GNHE~~ 127 (305)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999964
No 97
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=94.43 E-value=1.1 Score=41.40 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=41.8
Q ss_pred EEEecCCCC--HHHHHHHHHhCCC--CCCCcEEEeccccCCCCCcH--H------HHHHHHHHhHhCCC-cEEEECCCcc
Q 021907 59 KICGDIHGQ--YSDLLRLFEYGGF--PPKANYLFLGDYVDRGKQSL--E------TICLLLAYKIKYPE-NFFLLRGNHE 125 (305)
Q Consensus 59 ~viGDiHG~--~~~L~~il~~~g~--~~~~~~vfLGD~VDrG~~s~--e------vl~ll~~lk~~~p~-~v~~lrGNHE 125 (305)
--.|+-.-+ ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.||||
T Consensus 41 ~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD 120 (296)
T cd00842 41 GPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHD 120 (296)
T ss_pred CCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCC
Confidence 335555422 3444555554332 35678999999998775431 1 12223334444443 6999999999
Q ss_pred ccchh
Q 021907 126 CASIN 130 (305)
Q Consensus 126 ~~~~~ 130 (305)
....+
T Consensus 121 ~~p~~ 125 (296)
T cd00842 121 SYPVN 125 (296)
T ss_pred CCccc
Confidence 86543
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.15 E-value=0.06 Score=50.10 Aligned_cols=66 Identities=26% Similarity=0.310 Sum_probs=41.6
Q ss_pred cEEEEecCCCCHHH--------------HHHHHHhCCCC-CCCcEEEeccccCCCCC-c-----HHHHHHHHHHhHhCCC
Q 021907 57 PIKICGDIHGQYSD--------------LLRLFEYGGFP-PKANYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPE 115 (305)
Q Consensus 57 ~i~viGDiHG~~~~--------------L~~il~~~g~~-~~~~~vfLGD~VDrG~~-s-----~evl~ll~~lk~~~p~ 115 (305)
+++.++|+||++.. +..+++..... ++.-++..||++...+. + ..++.++-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 47889999998553 55566654432 33457779999987654 2 234555555431
Q ss_pred cEEEECCCcccc
Q 021907 116 NFFLLRGNHECA 127 (305)
Q Consensus 116 ~v~~lrGNHE~~ 127 (305)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3556999964
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.60 E-value=0.82 Score=38.58 Aligned_cols=115 Identities=25% Similarity=0.375 Sum_probs=80.0
Q ss_pred EEEEecCCC--CHHHHHHHHHhCCCCCC-CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhcc
Q 021907 58 IKICGDIHG--QYSDLLRLFEYGGFPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (305)
Q Consensus 58 i~viGDiHG--~~~~L~~il~~~g~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~g 134 (305)
+.|+||+|= ...+|-.=|++.-.|.. .+++++|++ .|.|++++|..+. ..++++||--|...
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNl-----cs~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNL-----CSKESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCc-----chHHHHHHHHhhC----CCcEEEecccCccc------
Confidence 678999995 45556556666556665 668999996 5789999987774 58999999876541
Q ss_pred chHHHHHHhchhhHHhhhhhcccCCeEE--EEcC-cEEEecCCcCCCCCCHHHhhcCCCCCCCCCchhHHHHHhcCCCCC
Q 021907 135 FYDECKRRFNVRLWKIFTDCFNCLPVAA--LIDD-KILCMHGGLSPDLINLDQIRKLPRPTDVPDSGLLCDLLWSDPGRD 211 (305)
Q Consensus 135 f~~e~~~~~~~~~~~~~~~~f~~LPl~~--~i~~-~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~ 211 (305)
..|..- .++. ++-|+||-.- +-|.||
T Consensus 68 ----------------------~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~--- 96 (183)
T KOG3325|consen 68 ----------------------KYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP--- 96 (183)
T ss_pred ----------------------cCCccceEEeccEEEEeecCcEe--------------------------ecCCCH---
Confidence 112221 2222 7889999432 125555
Q ss_pred CCCcccCCCCcccccCHHHHHHHHHhCCCcEEEEeeeeecCCeE
Q 021907 212 VKGWGMNDRGVSYTFGPDTVAEFLLKNDMDLVCRAHQVVEDGYE 255 (305)
Q Consensus 212 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 255 (305)
+++.-.-++.+++.++-||+..-+.|+
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye 123 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYE 123 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEE
Confidence 356666788899999999998777776
No 100
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=93.48 E-value=0.003 Score=60.57 Aligned_cols=204 Identities=11% Similarity=-0.115 Sum_probs=124.5
Q ss_pred CCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHh----chhhHHhhhhhcccC
Q 021907 83 KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF----NVRLWKIFTDCFNCL 158 (305)
Q Consensus 83 ~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~L 158 (305)
.-..|+++++.+++.+.++.+.+-+..+..+-.+.-..++||+.. +++++++.-.. ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 345899999999999999999999999988889999999999543 33343333222 124567778888888
Q ss_pred CeEEEEcCcEEEecCCcCCCCCCHHHhhcCCCCCCCCCchh---HHHHHhcCCCCCCCCcccCCCCcccccCHHH--HHH
Q 021907 159 PVAALIDDKILCMHGGLSPDLINLDQIRKLPRPTDVPDSGL---LCDLLWSDPGRDVKGWGMNDRGVSYTFGPDT--VAE 233 (305)
Q Consensus 159 Pl~~~i~~~il~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~---~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~--~~~ 233 (305)
+...+.+ ++++.||+..|.......+..+.-..--...+. -..++=+|-.. ...|. .++....||.+. .-+
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~--~~~~~p~~gyDfwyqpr 198 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWE--KPGHSPLFGYDFWYQPR 198 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-ecccc--cCCCccccccceeeccc
Confidence 8887755 999999999998754443332211100000000 01111111110 11121 122333333332 334
Q ss_pred HHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCC--ceEEEEEcc
Q 021907 234 FLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNSGAMMSVDDSL--MCSFQILKP 297 (305)
Q Consensus 234 fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~~~~~n~ga~l~i~~~~--~~~~~~~~~ 297 (305)
+....+.+...+.|.....+.....++ ++.++.+-|.-...|.++.+.++.+. ...+..++.
T Consensus 199 ~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~ 262 (476)
T KOG0918|consen 199 HNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHN 262 (476)
T ss_pred cceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeeccC
Confidence 556666777778887654444444555 78888888887788889988887752 334444443
No 101
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.87 E-value=0.2 Score=45.89 Aligned_cols=65 Identities=20% Similarity=0.176 Sum_probs=36.8
Q ss_pred cEEEEecCCCCHHH----------------------HHHHHHhCCCC-CCCc-EEEeccccCCCCCcH-----HHHHHHH
Q 021907 57 PIKICGDIHGQYSD----------------------LLRLFEYGGFP-PKAN-YLFLGDYVDRGKQSL-----ETICLLL 107 (305)
Q Consensus 57 ~i~viGDiHG~~~~----------------------L~~il~~~g~~-~~~~-~vfLGD~VDrG~~s~-----evl~ll~ 107 (305)
.++.++|+||++.. +..+++..... ..+. ++..||+++..+.+. .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 36778899997533 34445543322 2333 456899998876432 3344443
Q ss_pred HHhHhCCCcEEEECCCcccc
Q 021907 108 AYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 108 ~lk~~~p~~v~~lrGNHE~~ 127 (305)
.+ +-.+. . ||||..
T Consensus 82 ~~----g~da~-~-GNHefd 95 (264)
T cd07411 82 AL----GVDAM-V-GHWEFT 95 (264)
T ss_pred hh----CCeEE-e-cccccc
Confidence 33 32333 3 999964
No 102
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=92.85 E-value=0.47 Score=41.32 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=44.7
Q ss_pred CCCCcEEEecccc--CCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHHHHhchhhHHhhhhhcccC
Q 021907 81 PPKANYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCL 158 (305)
Q Consensus 81 ~~~~~~vfLGD~V--DrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 158 (305)
.++|.++.-||+- -|=++..+=+.++-+| |+.=+++|||||...-. ...+...+... ....++.|..+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEe
Confidence 3556777789975 3444445555555554 88999999999986542 12333333333 44556777777
Q ss_pred CeEEEEc
Q 021907 159 PVAALID 165 (305)
Q Consensus 159 Pl~~~i~ 165 (305)
..| +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 643 444
No 103
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=91.84 E-value=0.54 Score=44.75 Aligned_cols=49 Identities=18% Similarity=0.149 Sum_probs=31.8
Q ss_pred CCCCcEEEeccccCCCC--CcHHHHHHHHHHhHhCCCcEEEECCCccccch
Q 021907 81 PPKANYLFLGDYVDRGK--QSLETICLLLAYKIKYPENFFLLRGNHECASI 129 (305)
Q Consensus 81 ~~~~~~vfLGD~VDrG~--~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 129 (305)
...|.+||+||.|+.-. +...++.-..+-.+.+.=....+.||||+...
T Consensus 99 E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 34578999999998721 22333333333344455568899999998644
No 104
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.51 E-value=0.39 Score=46.83 Aligned_cols=44 Identities=25% Similarity=0.380 Sum_probs=33.4
Q ss_pred CCcEEEeccccCCCCCc--HHHHHHHHHHhHhCCC----cEEEECCCccc
Q 021907 83 KANYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 126 (305)
Q Consensus 83 ~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~p~----~v~~lrGNHE~ 126 (305)
.+.++||||++|-|... -|--.....++..+|. .+..+.||||-
T Consensus 94 PdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 94 PDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 46788999999988754 4445556667766665 69999999996
No 105
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.41 E-value=0.25 Score=54.76 Aligned_cols=66 Identities=17% Similarity=0.070 Sum_probs=40.4
Q ss_pred cEEEEecCCCCH---HHHHHHHHhCCCCCCCcE-EEeccccCCCCCcH-----HHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 57 PIKICGDIHGQY---SDLLRLFEYGGFPPKANY-LFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 57 ~i~viGDiHG~~---~~L~~il~~~g~~~~~~~-vfLGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
.++.++|+||++ ..+..+++...-...+.+ +..||++++.+.+. ..+.++-.+. --+...||||..
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEfd 736 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEFD 736 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccccc
Confidence 578899999975 444444554332223344 44899999876542 3444444432 235689999973
No 106
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=91.25 E-value=0.54 Score=36.63 Aligned_cols=43 Identities=16% Similarity=0.306 Sum_probs=31.2
Q ss_pred ChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeec
Q 021907 2 EPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPNLLEL 54 (305)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ll~~ 54 (305)
+.+.++++|+..-..+ .++...+..|+.++.++|+++|+++++
T Consensus 53 t~efv~~mie~FK~~K----------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQK----------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT--------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhCC----------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4556677777766544 688999999999999999999999975
No 107
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=90.54 E-value=0.55 Score=43.48 Aligned_cols=66 Identities=18% Similarity=0.148 Sum_probs=37.3
Q ss_pred cEEEEecCCCCH---------------------HHHHHHHHhCCCC-CCCcEEEeccccCCCCCc-----HHHHHHHHHH
Q 021907 57 PIKICGDIHGQY---------------------SDLLRLFEYGGFP-PKANYLFLGDYVDRGKQS-----LETICLLLAY 109 (305)
Q Consensus 57 ~i~viGDiHG~~---------------------~~L~~il~~~g~~-~~~~~vfLGD~VDrG~~s-----~evl~ll~~l 109 (305)
.++-++|+||++ ..+..+++..... ++.-++..||+++..+.+ ...+..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999875 3344555544322 233355589999876543 2333333333
Q ss_pred hHhCCCcEEEECCCcccc
Q 021907 110 KIKYPENFFLLRGNHECA 127 (305)
Q Consensus 110 k~~~p~~v~~lrGNHE~~ 127 (305)
. . .+. ..||||.-
T Consensus 82 g---~-D~~-~lGNHefd 94 (281)
T cd07409 82 G---Y-DAM-TLGNHEFD 94 (281)
T ss_pred C---C-CEE-Eecccccc
Confidence 2 2 344 45999974
No 108
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=89.65 E-value=0.67 Score=42.31 Aligned_cols=56 Identities=23% Similarity=0.128 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHhCCCCCCC-cEEEeccccCCCCCc-----HHHHHHHHHHhHhCCCcEEEECCCccc
Q 021907 66 GQYSDLLRLFEYGGFPPKA-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 126 (305)
Q Consensus 66 G~~~~L~~il~~~g~~~~~-~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lrGNHE~ 126 (305)
|.+.-+..+++...-...+ -++..||+++..+.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 3466677777765433333 567789999887532 34555554443 23567899996
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=88.69 E-value=0.85 Score=42.17 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=48.3
Q ss_pred CcEEEEecCCCC--HHHHHHHHHhCCCC-CCCcEEEeccccCCC-CCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 56 APIKICGDIHGQ--YSDLLRLFEYGGFP-PKANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 56 ~~i~viGDiHG~--~~~L~~il~~~g~~-~~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
|++.++|||=|. ...+...|..+... +.+-+|..||....| .-+.++...|..+- -.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 689999999999 56666666655433 235677789999766 45677787777664 356666 999875
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.23 E-value=1 Score=39.48 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=41.0
Q ss_pred EEEEecCCCC-----HHHHHHHHHhCC-CCCCCcEEEeccccCCCCCcH----------HHHHHHHHHhH-----hCCCc
Q 021907 58 IKICGDIHGQ-----YSDLLRLFEYGG-FPPKANYLFLGDYVDRGKQSL----------ETICLLLAYKI-----KYPEN 116 (305)
Q Consensus 58 i~viGDiHG~-----~~~L~~il~~~g-~~~~~~~vfLGD~VDrG~~s~----------evl~ll~~lk~-----~~p~~ 116 (305)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+.. ..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888865 667788888776 555678999999999632221 11111112211 12348
Q ss_pred EEEECCCccccch
Q 021907 117 FFLLRGNHECASI 129 (305)
Q Consensus 117 v~~lrGNHE~~~~ 129 (305)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 111
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=87.20 E-value=0.78 Score=42.68 Aligned_cols=66 Identities=18% Similarity=0.079 Sum_probs=37.8
Q ss_pred cEEEEecCCCCHH----------------HHHHHHHh-CCC-CCCCcEEEeccccCCCCCc-------HHHHHHHHHHhH
Q 021907 57 PIKICGDIHGQYS----------------DLLRLFEY-GGF-PPKANYLFLGDYVDRGKQS-------LETICLLLAYKI 111 (305)
Q Consensus 57 ~i~viGDiHG~~~----------------~L~~il~~-~g~-~~~~~~vfLGD~VDrG~~s-------~evl~ll~~lk~ 111 (305)
.|+-+.|+||++. .+.+.++. ... .++.-++..||.++.-+.+ .-.+.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 4788899999864 22222221 111 2233455689999865433 22344444443
Q ss_pred hCCCcEEEECCCcccc
Q 021907 112 KYPENFFLLRGNHECA 127 (305)
Q Consensus 112 ~~p~~v~~lrGNHE~~ 127 (305)
--.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 356788999994
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.79 E-value=1.4 Score=43.40 Aligned_cols=69 Identities=22% Similarity=0.388 Sum_probs=54.6
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhCCC--CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCc
Q 021907 55 AAPIKICGDIHGQYSDLLRLFEYGGF--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 124 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNH 124 (305)
+.+|.|+||.-|+++.|.+-.+.... .|-+.++++|++.+-..++.|++.+... ....|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng-~~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNG-TKKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcC-CccCceeEEEecCCC
Confidence 46899999999999999877765543 2458899999999987788888776654 345787888888876
No 113
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=86.14 E-value=1 Score=45.44 Aligned_cols=69 Identities=25% Similarity=0.207 Sum_probs=42.3
Q ss_pred cCcEEEEecCCCCHH------------HHH---HHHHhCCCCC-CCcEEEeccccCCCC------CcHHHHHHHHHHhHh
Q 021907 55 AAPIKICGDIHGQYS------------DLL---RLFEYGGFPP-KANYLFLGDYVDRGK------QSLETICLLLAYKIK 112 (305)
Q Consensus 55 ~~~i~viGDiHG~~~------------~L~---~il~~~g~~~-~~~~vfLGD~VDrG~------~s~evl~ll~~lk~~ 112 (305)
+-.++-..|+||++. -+. .+++...... +..+|=.||++++.+ .....+.++-.++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 345888999999998 332 2333222222 233555899999833 3344566666665
Q ss_pred CCCcEEEECCCccccc
Q 021907 113 YPENFFLLRGNHECAS 128 (305)
Q Consensus 113 ~p~~v~~lrGNHE~~~ 128 (305)
-=.+..||||.-.
T Consensus 104 ---yDa~tiGNHEFd~ 116 (517)
T COG0737 104 ---YDAMTLGNHEFDY 116 (517)
T ss_pred ---CcEEeeccccccc
Confidence 3467789999853
No 114
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=85.89 E-value=0.87 Score=43.63 Aligned_cols=73 Identities=29% Similarity=0.444 Sum_probs=48.7
Q ss_pred CcEEEEecCCCCHHHHHH---HHHhCCCCCCCcEEEeccccC-CCCCcHHHH------HHH------HHHhHhCCCcEEE
Q 021907 56 APIKICGDIHGQYSDLLR---LFEYGGFPPKANYLFLGDYVD-RGKQSLETI------CLL------LAYKIKYPENFFL 119 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L~~---il~~~g~~~~~~~vfLGD~VD-rG~~s~evl------~ll------~~lk~~~p~~v~~ 119 (305)
|+|.|-|=-||.++.+-+ ..++.|-.+.|.++++||+=- |....+..+ ..+ +.=..+.|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999999874 445566667789999999852 221111111 111 1113456767889
Q ss_pred ECCCccccc
Q 021907 120 LRGNHECAS 128 (305)
Q Consensus 120 lrGNHE~~~ 128 (305)
+-||||.++
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999864
No 115
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=85.76 E-value=1 Score=41.78 Aligned_cols=66 Identities=20% Similarity=0.035 Sum_probs=36.0
Q ss_pred cEEEEecCCCCHHH----------HHHHHHhCCC-----CCCCcEEEeccccCCCCCc-----HHHHHHHHHHhHhCCCc
Q 021907 57 PIKICGDIHGQYSD----------LLRLFEYGGF-----PPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPEN 116 (305)
Q Consensus 57 ~i~viGDiHG~~~~----------L~~il~~~g~-----~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~ 116 (305)
.|+-++|+||++.. +..+++.... .++.-++-.||.+...+.+ ..++.++-.+. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 36788999998533 3344443221 2333455589998543322 23334444443 23
Q ss_pred EEEECCCcccc
Q 021907 117 FFLLRGNHECA 127 (305)
Q Consensus 117 v~~lrGNHE~~ 127 (305)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999964
No 116
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=84.62 E-value=7.6 Score=34.04 Aligned_cols=85 Identities=15% Similarity=0.243 Sum_probs=66.4
Q ss_pred CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccch----------------HHHHHHhchhh
Q 021907 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRL 147 (305)
Q Consensus 84 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 147 (305)
..+||+| .|-+.-|.+.++-+|+.+|..+-++ .|+-|.+..++...|. .|..+.|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4589998 6889999999999999888877665 8999998877655442 34444455667
Q ss_pred HHhhhhhcccCCeEEEEcCcEEEecC
Q 021907 148 WKIFTDCFNCLPVAALIDDKILCMHG 173 (305)
Q Consensus 148 ~~~~~~~f~~LPl~~~i~~~il~vHg 173 (305)
|..+...+-++++...+-.+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88888888888999888777777777
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=84.56 E-value=1.6 Score=41.30 Aligned_cols=65 Identities=20% Similarity=0.044 Sum_probs=39.5
Q ss_pred EEEEecCCCCHH------HHHHHHHhCCC-----CCCCcEEEeccccCCCCC-------------cHHHHHHHHHHhHhC
Q 021907 58 IKICGDIHGQYS------DLLRLFEYGGF-----PPKANYLFLGDYVDRGKQ-------------SLETICLLLAYKIKY 113 (305)
Q Consensus 58 i~viGDiHG~~~------~L~~il~~~g~-----~~~~~~vfLGD~VDrG~~-------------s~evl~ll~~lk~~~ 113 (305)
++-+.|+||++. .+..+++.... .++.-++..||.+..++. ...++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 667899999953 33333443221 233456678999976543 334455555554
Q ss_pred CCcEEEECCCcccc
Q 021907 114 PENFFLLRGNHECA 127 (305)
Q Consensus 114 p~~v~~lrGNHE~~ 127 (305)
-=.+..||||.-
T Consensus 80 --~Da~tlGNHEFD 91 (313)
T cd08162 80 --VQAIALGNHEFD 91 (313)
T ss_pred --CcEEeccccccc
Confidence 346779999963
No 118
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.97 E-value=1.7 Score=45.21 Aligned_cols=69 Identities=16% Similarity=0.078 Sum_probs=43.3
Q ss_pred ccCcEEEEecCCCCHHH----------------HHHHHHhCCC-CCCCcEEEeccccCCCCCcH-------------HHH
Q 021907 54 LAAPIKICGDIHGQYSD----------------LLRLFEYGGF-PPKANYLFLGDYVDRGKQSL-------------ETI 103 (305)
Q Consensus 54 ~~~~i~viGDiHG~~~~----------------L~~il~~~g~-~~~~~~vfLGD~VDrG~~s~-------------evl 103 (305)
...+|+-..|+||++.. +..+++.... .++..+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45578889999998743 2333443321 13345667999998766431 245
Q ss_pred HHHHHHhHhCCCcEEEECCCcccc
Q 021907 104 CLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 104 ~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
..+-.|. --....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 5555554 356788999964
No 119
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=82.57 E-value=1.7 Score=45.03 Aligned_cols=67 Identities=18% Similarity=0.078 Sum_probs=40.7
Q ss_pred CcEEEEecCCCCHHH----------------HHHHHHhCCCC-CCCcEEEeccccCCCCCc-------------HHHHHH
Q 021907 56 APIKICGDIHGQYSD----------------LLRLFEYGGFP-PKANYLFLGDYVDRGKQS-------------LETICL 105 (305)
Q Consensus 56 ~~i~viGDiHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDrG~~s-------------~evl~l 105 (305)
-+|+-..|+||++.. +..+++..... ++..+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 357888999999753 33344433221 234566689999865543 224455
Q ss_pred HHHHhHhCCCcEEEECCCcccc
Q 021907 106 LLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 106 l~~lk~~~p~~v~~lrGNHE~~ 127 (305)
+-.|. -=....||||.-
T Consensus 83 mN~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred HhhcC-----ccEEeccccccc
Confidence 54443 345788999964
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.21 E-value=1.7 Score=48.19 Aligned_cols=67 Identities=22% Similarity=0.201 Sum_probs=39.1
Q ss_pred CcEEEEecCCCCHHH----------------HHHHHHhCCCC-CCCcEEEeccccCCCCC--------------cHHHHH
Q 021907 56 APIKICGDIHGQYSD----------------LLRLFEYGGFP-PKANYLFLGDYVDRGKQ--------------SLETIC 104 (305)
Q Consensus 56 ~~i~viGDiHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDrG~~--------------s~evl~ 104 (305)
-+|+-++|+||++.. +..+++..... ++.-++-.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 458889999998643 33444443222 22334448999987652 123344
Q ss_pred HHHHHhHhCCCcEEEECCCcccc
Q 021907 105 LLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 105 ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
.+-.+. --....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 444443 345679999973
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=81.44 E-value=1.1 Score=44.25 Aligned_cols=41 Identities=24% Similarity=0.383 Sum_probs=34.7
Q ss_pred CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccch
Q 021907 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 129 (305)
Q Consensus 84 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 129 (305)
|++=.+||+-||||++-.+++-|..+. .+-+--||||--++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 567778999999999999999988774 68888999997444
No 122
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=79.38 E-value=4.5 Score=37.16 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=43.6
Q ss_pred cEEEEecCCCCH--HHHHHHHHhCCCC-CCCcEEEeccccCCC-CCcHHHHHHHHHHhHhCCCcEEEECCCcccc
Q 021907 57 PIKICGDIHGQY--SDLLRLFEYGGFP-PKANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 57 ~i~viGDiHG~~--~~L~~il~~~g~~-~~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
++.+||||=|.- ..+...|...... +.+-+|..||..-.| .-+.++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 578999999974 3344555443322 235566689998766 467788777777653 45544 999864
No 123
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=75.69 E-value=5.6 Score=38.88 Aligned_cols=72 Identities=10% Similarity=0.027 Sum_probs=41.0
Q ss_pred CcEEEEecCCCCHHHH---HHHHHhC-CCCCCCcEEEeccccCCCCCcHH------HHHHHHHHhH-hCCCcEEEECCCc
Q 021907 56 APIKICGDIHGQYSDL---LRLFEYG-GFPPKANYLFLGDYVDRGKQSLE------TICLLLAYKI-KYPENFFLLRGNH 124 (305)
Q Consensus 56 ~~i~viGDiHG~~~~L---~~il~~~-g~~~~~~~vfLGD~VDrG~~s~e------vl~ll~~lk~-~~p~~v~~lrGNH 124 (305)
-+++++||-=+-...- .+.+... ...+.+-+|-+||-++.|..++. ..+-++.-.. ...-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3689999965422222 2223222 22344667889999988877643 2333332211 0122699999999
Q ss_pred ccc
Q 021907 125 ECA 127 (305)
Q Consensus 125 E~~ 127 (305)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.26 E-value=4.2 Score=43.45 Aligned_cols=68 Identities=21% Similarity=0.095 Sum_probs=41.1
Q ss_pred cCcEEEEecCCCCHHHH----------------HHHHHhCCC-CCCCcEEEeccccCCCCCc--------------HHHH
Q 021907 55 AAPIKICGDIHGQYSDL----------------LRLFEYGGF-PPKANYLFLGDYVDRGKQS--------------LETI 103 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~L----------------~~il~~~g~-~~~~~~vfLGD~VDrG~~s--------------~evl 103 (305)
+-+|+-..|+||++... ..+++.... .++..+|..||.+..-+.+ .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 34578899999996432 223333221 1334567789999865432 1255
Q ss_pred HHHHHHhHhCCCcEEEECCCcccc
Q 021907 104 CLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 104 ~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
.++-.|. --....||||.-
T Consensus 195 ~amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 195 AALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHHhccC-----CCEEEechhhcc
Confidence 5555554 346788999964
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=72.48 E-value=6.8 Score=39.93 Aligned_cols=65 Identities=23% Similarity=0.088 Sum_probs=37.9
Q ss_pred EEEEecCCCCHHH---------------------HHHHHHhCCC-CCCCcEEEeccccCCCCCc-----HHHHHHHHHHh
Q 021907 58 IKICGDIHGQYSD---------------------LLRLFEYGGF-PPKANYLFLGDYVDRGKQS-----LETICLLLAYK 110 (305)
Q Consensus 58 i~viGDiHG~~~~---------------------L~~il~~~g~-~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk 110 (305)
++-+.|+||++.. +..+++...- .++..++..||.+...+.+ ...+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887643 2333333221 2344566789999765433 22344444443
Q ss_pred HhCCCcEEEECCCcccc
Q 021907 111 IKYPENFFLLRGNHECA 127 (305)
Q Consensus 111 ~~~p~~v~~lrGNHE~~ 127 (305)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 357788999974
No 126
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=72.21 E-value=5.2 Score=37.16 Aligned_cols=64 Identities=23% Similarity=0.258 Sum_probs=42.2
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCC-CcEEEECCCccccc
Q 021907 57 PIKICGDIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECAS 128 (305)
Q Consensus 57 ~i~viGDiHG~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p-~~v~~lrGNHE~~~ 128 (305)
+.+.|+|.|+...+.. ..|+.|.++.+||+-.-|. +-||..+=-.+ -..| ..=+.|+||||...
T Consensus 63 r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred EEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 5899999999766653 3566788899999877654 45555442222 1122 23567999999753
No 127
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=71.90 E-value=15 Score=34.41 Aligned_cols=72 Identities=14% Similarity=0.208 Sum_probs=47.6
Q ss_pred CcEEEEecCCC----CHHHHHHHHHhCC-CCC----CCcEEEeccccCCC----CCcH----HHHHHHHHH-hHhCC---
Q 021907 56 APIKICGDIHG----QYSDLLRLFEYGG-FPP----KANYLFLGDYVDRG----KQSL----ETICLLLAY-KIKYP--- 114 (305)
Q Consensus 56 ~~i~viGDiHG----~~~~L~~il~~~g-~~~----~~~~vfLGD~VDrG----~~s~----evl~ll~~l-k~~~p--- 114 (305)
..++|+||+|= .++.|.++|+... ..+ ...+|++|++..+. ..+. |-.+-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 45899999995 4788888888762 212 34689999999763 2222 333334332 23455
Q ss_pred --CcEEEECCCcccc
Q 021907 115 --ENFFLLRGNHECA 127 (305)
Q Consensus 115 --~~v~~lrGNHE~~ 127 (305)
.++++|+|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 6899999999974
No 128
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=69.36 E-value=5.8 Score=40.33 Aligned_cols=68 Identities=19% Similarity=0.045 Sum_probs=37.1
Q ss_pred cCcEEEEecCCCCHHH----------HHHHHHhCC-----CCCCCcEEEeccccCCCCCc-----HHHHHHHHHHhHhCC
Q 021907 55 AAPIKICGDIHGQYSD----------LLRLFEYGG-----FPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYP 114 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~----------L~~il~~~g-----~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p 114 (305)
+-.++-+.|+||++.. +..+++... ..++.-++..||.+...+.+ .-++.++-.+.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 3457889999998742 223333321 12334466689998643322 12233343333
Q ss_pred CcEEEECCCcccc
Q 021907 115 ENFFLLRGNHECA 127 (305)
Q Consensus 115 ~~v~~lrGNHE~~ 127 (305)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 23444 4999975
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=64.76 E-value=9.2 Score=40.76 Aligned_cols=67 Identities=19% Similarity=0.087 Sum_probs=40.0
Q ss_pred cCcEEEEecCCCCHHH----------------HHHHHHhCCC-CCCCcEEEeccccCCCCCc------------------
Q 021907 55 AAPIKICGDIHGQYSD----------------LLRLFEYGGF-PPKANYLFLGDYVDRGKQS------------------ 99 (305)
Q Consensus 55 ~~~i~viGDiHG~~~~----------------L~~il~~~g~-~~~~~~vfLGD~VDrG~~s------------------ 99 (305)
.-+|+-..|+||++.. +..+++.... .++..+|-.||.+-.-+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4468899999999633 2333333221 1334566789998543322
Q ss_pred -HHHHHHHHHHhHhCCCcEEEECCCccc
Q 021907 100 -LETICLLLAYKIKYPENFFLLRGNHEC 126 (305)
Q Consensus 100 -~evl~ll~~lk~~~p~~v~~lrGNHE~ 126 (305)
.-++.++-.|. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23455555544 34677899995
No 130
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=64.27 E-value=23 Score=36.07 Aligned_cols=55 Identities=20% Similarity=0.185 Sum_probs=42.8
Q ss_pred cCcEEEEecCCC------------CHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHH
Q 021907 55 AAPIKICGDIHG------------QYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAY 109 (305)
Q Consensus 55 ~~~i~viGDiHG------------~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~l 109 (305)
..+|.|..|.|= .+..|..+|+.+.-...|.++.=||+++--.-|.++|..++.+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 357899999983 4788999999877666777888899999888787776654444
No 131
>PF14164 YqzH: YqzH-like protein
Probab=54.36 E-value=46 Score=23.96 Aligned_cols=47 Identities=23% Similarity=0.320 Sum_probs=37.6
Q ss_pred CChhhHHHHHHHHHcCcCCCCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 021907 1 MEPAVLDDIISRLLDFKNGRGGGGKQVQLSESEIRMLCTVSREIFLQQPN 50 (305)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~il~~e~~ 50 (305)
|+..-|+.+|.+.|+.= .......+++++|...|++.....-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QY---g~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQY---GYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHh---CCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 67778888888888754 233455689999999999999999998885
No 132
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=50.91 E-value=6.1 Score=32.59 Aligned_cols=86 Identities=23% Similarity=0.391 Sum_probs=48.3
Q ss_pred cCCCCHHHHHHHHHhCCCCCCCc--EEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccchhhhccchHHHH
Q 021907 63 DIHGQYSDLLRLFEYGGFPPKAN--YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 140 (305)
Q Consensus 63 DiHG~~~~L~~il~~~g~~~~~~--~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~ 140 (305)
|+.|++.-|.+.|+.+++|..-. -+-.|| +...+-++-..-..|+..|.-.. +...|..+..-.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 89999999999999999984321 133343 22222233222233443332111 111222233334
Q ss_pred HHhchhhHHhhhhhcccCCeEE
Q 021907 141 RRFNVRLWKIFTDCFNCLPVAA 162 (305)
Q Consensus 141 ~~~~~~~~~~~~~~f~~LPl~~ 162 (305)
.+|-+.+|+.+.+.|.+-|...
T Consensus 67 ~RF~E~vyk~LRdef~YkP~lT 88 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSLT 88 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC
Confidence 5566778888888888888653
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=49.24 E-value=57 Score=24.25 Aligned_cols=71 Identities=13% Similarity=0.030 Sum_probs=48.1
Q ss_pred ccCcEEEEecCCCCHHHHHHHHHhCCC--CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCc
Q 021907 54 LAAPIKICGDIHGQYSDLLRLFEYGGF--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 124 (305)
Q Consensus 54 ~~~~i~viGDiHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNH 124 (305)
....+.||=|---|.+.+..+++.+.. +....++.+|+.-|+|..+.+....+-.+...+.+.+++...|+
T Consensus 10 ~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 10 EPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 334577888866788888888776532 34566788999999888888866666666666667766666554
No 134
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=49.10 E-value=85 Score=26.61 Aligned_cols=102 Identities=15% Similarity=0.200 Sum_probs=61.6
Q ss_pred EEEecCCCCHHHHHHHHHh-CCC------------CCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCcc
Q 021907 59 KICGDIHGQYSDLLRLFEY-GGF------------PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 (305)
Q Consensus 59 ~viGDiHG~~~~L~~il~~-~g~------------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE 125 (305)
++.+-.+||-..+.+.+.. ++. ..+..+||+|=.+|+|.-+-++..+|-.|+ +.+|++.-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF~---- 74 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALFG---- 74 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEEE----
Confidence 5677788888887665543 222 123569999999999999999999988875 45555431
Q ss_pred ccchhhhccchHHHHHHhchhhHHhhhhhcccCCeEEEEcCcEEEecCCcCCCC
Q 021907 126 CASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPDL 179 (305)
Q Consensus 126 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPl~~~i~~~il~vHgGi~p~~ 179 (305)
..|+.. ...|...+.+....++.. ...+- +.|+|+|-++|.+
T Consensus 75 ------T~G~~~--~s~~~~~~~~~~~~~~~~---~~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 75 ------TAGAGP--DSEYAKKILKNVEALLPK---GNEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred ------ecCCCC--chHHHHHHHHHHHHhhcc---CCeec-ceEEeCCcCCHHH
Confidence 223221 122223333333333322 22222 4678899998854
No 135
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=46.98 E-value=36 Score=33.89 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeE
Q 021907 229 DTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQL 262 (305)
Q Consensus 229 ~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~ 262 (305)
..++..+-++++++++-||.-.-++.....|.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3699999999999999999987666655566555
No 136
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=46.66 E-value=10 Score=35.39 Aligned_cols=67 Identities=22% Similarity=0.368 Sum_probs=42.1
Q ss_pred cEEEEecC--CCCHHHHHHHHHhCCCC---CCCcEEEecccc-CCCCCc---------HHHHHHHHHHhHhCCCcEEEEC
Q 021907 57 PIKICGDI--HGQYSDLLRLFEYGGFP---PKANYLFLGDYV-DRGKQS---------LETICLLLAYKIKYPENFFLLR 121 (305)
Q Consensus 57 ~i~viGDi--HG~~~~L~~il~~~g~~---~~~~~vfLGD~V-DrG~~s---------~evl~ll~~lk~~~p~~v~~lr 121 (305)
+++||||- +|.+..-+-.++..... +.+-+|-+||=+ |-|..+ .|-+.---+|+ ...+.+.
T Consensus 45 sflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy~vl 120 (336)
T KOG2679|consen 45 SFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWYSVL 120 (336)
T ss_pred EEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchhhhc
Confidence 68999995 78777766555543322 235677899976 555544 23222222332 2589999
Q ss_pred CCcccc
Q 021907 122 GNHECA 127 (305)
Q Consensus 122 GNHE~~ 127 (305)
||||.+
T Consensus 121 GNHDyr 126 (336)
T KOG2679|consen 121 GNHDYR 126 (336)
T ss_pred cCcccc
Confidence 999975
No 137
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=46.06 E-value=20 Score=37.04 Aligned_cols=41 Identities=24% Similarity=0.402 Sum_probs=35.6
Q ss_pred CcEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECCCccccch
Q 021907 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 129 (305)
Q Consensus 84 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 129 (305)
|++-.+||+.||||.+-.+++.|+... +|=+--||||--++
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWM 226 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWM 226 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHH
Confidence 577789999999999999999998764 78999999997444
No 138
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.35 E-value=62 Score=30.95 Aligned_cols=60 Identities=22% Similarity=0.384 Sum_probs=40.5
Q ss_pred HHhhCCCeeeccCcEEEEecCC-CCHHHHHHHHHhCCCCCCCcEEE-eccccC--CCCCcHHHHHHHHHHhH
Q 021907 44 IFLQQPNLLELAAPIKICGDIH-GQYSDLLRLFEYGGFPPKANYLF-LGDYVD--RGKQSLETICLLLAYKI 111 (305)
Q Consensus 44 il~~e~~ll~~~~~i~viGDiH-G~~~~L~~il~~~g~~~~~~~vf-LGD~VD--rG~~s~evl~ll~~lk~ 111 (305)
-++.-|..++-.+.+.|+||.| |||.++.. .+..++| +-|+=. -|++-..++.+..+|..
T Consensus 45 ~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 45 DMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 3456677788888899999999 78877732 2233444 555432 36777777777777753
No 139
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=38.14 E-value=1.1e+02 Score=27.92 Aligned_cols=58 Identities=26% Similarity=0.363 Sum_probs=32.8
Q ss_pred CCcEEEECCCccccchhhhccchHHHH-HHh-chhhHHhhhhhcccCCeEEEEc-CcEEEecCCcCCC
Q 021907 114 PENFFLLRGNHECASINRIYGFYDECK-RRF-NVRLWKIFTDCFNCLPVAALID-DKILCMHGGLSPD 178 (305)
Q Consensus 114 p~~v~~lrGNHE~~~~~~~~gf~~e~~-~~~-~~~~~~~~~~~f~~LPl~~~i~-~~il~vHgGi~p~ 178 (305)
.++|++|-||||.- .++.|. ..+. .+. ..+-|. ....+|.+-.-. .+++..|-||-.+
T Consensus 127 nknvvvlagnhein-~ngny~--arlanhkls~gDTYn----lIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEIN-FNGNYM--ARLANHKLSAGDTYN----LIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceec-cCchHH--HHHhhCCCCccchhh----ccccccccccCcchhhhhcccCceec
Confidence 46899999999974 343331 1111 111 122333 346677775522 2688888888654
No 140
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=31.67 E-value=1.6e+02 Score=29.00 Aligned_cols=66 Identities=11% Similarity=0.029 Sum_probs=46.8
Q ss_pred CcEEEEecCCC-CHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhC-CCcEEEECC
Q 021907 56 APIKICGDIHG-QYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 122 (305)
Q Consensus 56 ~~i~viGDiHG-~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~-p~~v~~lrG 122 (305)
..+.||=|-+. +.+.+...|+.+...+..+++.+||+...|+.+.+.-.-+-.+.... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788989655 67888888776543344578899999999999988776665544433 4555544 5
No 141
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=29.69 E-value=3.8e+02 Score=23.33 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=60.4
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCCCHHHHHHHHHhCCCCC----------------------
Q 021907 25 KQVQLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHGQYSDLLRLFEYGGFPP---------------------- 82 (305)
Q Consensus 25 ~~~~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG~~~~L~~il~~~g~~~---------------------- 82 (305)
..+.++++++..=+++..+.+.++..= -..++||=++|++--+-.+++...++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i 83 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKI 83 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEE
Confidence 456799999999999988888876542 568899999999988888877755432
Q ss_pred ---------CCcEEEeccccCCCCCcHHHHHHHH
Q 021907 83 ---------KANYLFLGDYVDRGKQSLETICLLL 107 (305)
Q Consensus 83 ---------~~~~vfLGD~VDrG~~s~evl~ll~ 107 (305)
...++.+=|++|-|.--..+..+|.
T Consensus 84 ~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 84 LKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ecccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 1358889999998876666555553
No 142
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=28.34 E-value=4.3e+02 Score=26.06 Aligned_cols=91 Identities=23% Similarity=0.307 Sum_probs=62.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeccCcEEEEecCCC-------C---HHHHHHHHHhCCCCCCCc-----------E
Q 021907 28 QLSESEIRMLCTVSREIFLQQPNLLELAAPIKICGDIHG-------Q---YSDLLRLFEYGGFPPKAN-----------Y 86 (305)
Q Consensus 28 ~~~~~~~~~l~~~a~~il~~e~~ll~~~~~i~viGDiHG-------~---~~~L~~il~~~g~~~~~~-----------~ 86 (305)
+...+.+.+.++...+++..-..++.-++....|||=-| + ++-+.+..+.+|+.+... +
T Consensus 168 p~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasef 247 (423)
T COG0148 168 PVGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEF 247 (423)
T ss_pred ecChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhh
Confidence 456789999999999999998888888888888999777 2 333445556777765321 1
Q ss_pred EEeccccCC--CCCcHHHHHHHHHHhHhCCCcEEEE
Q 021907 87 LFLGDYVDR--GKQSLETICLLLAYKIKYPENFFLL 120 (305)
Q Consensus 87 vfLGD~VDr--G~~s~evl~ll~~lk~~~p~~v~~l 120 (305)
.=-|.|+-. ...+-|.++++..|-.+|| ++.+
T Consensus 248 y~~~~Y~~~~~~~~~~e~i~~~~~Lv~~Yp--ivsi 281 (423)
T COG0148 248 YKDGKYVLEGESLTSEELIEYYLELVKKYP--IVSI 281 (423)
T ss_pred ccCCeeeecCcccCHHHHHHHHHHHHHhCC--EEEE
Confidence 111223322 3466788899999988898 5443
No 143
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=26.44 E-value=1.2e+02 Score=26.88 Aligned_cols=41 Identities=29% Similarity=0.491 Sum_probs=29.4
Q ss_pred HHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCC
Q 021907 230 TVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 272 (305)
Q Consensus 230 ~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 272 (305)
.+.+.+-..|+++||-||.-+..+++... +++| +||-=|++
T Consensus 198 ~la~~l~~~G~D~IiG~H~Hv~q~~E~~~-~~~I-~YSlGNfi 238 (239)
T cd07381 198 ELARALIDAGADLVIGHHPHVLQGIEIYK-GKLI-FYSLGNFV 238 (239)
T ss_pred HHHHHHHHCCCCEEEcCCCCcCCCeEEEC-CEEE-EEcCCCcc
Confidence 34444555799999999999989999754 4444 68766553
No 144
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=23.83 E-value=1.5e+02 Score=26.53 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=31.0
Q ss_pred HHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCC
Q 021907 230 TVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 272 (305)
Q Consensus 230 ~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 272 (305)
.+.+.|-..|+++||-+|.-+..|++.. ++++| +||-=|+.
T Consensus 207 ~~a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 207 ELARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 3455555589999999999999999987 44544 78876664
No 145
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=23.82 E-value=81 Score=28.88 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=25.3
Q ss_pred cEEEeccccCCCCCcHHHHHHHHHHhHhCCCcEEEECC
Q 021907 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 122 (305)
Q Consensus 85 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 122 (305)
+++|+||+|.+.-.. -+...|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 479999999875433 3445677788888766665533
No 146
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=23.76 E-value=1.5e+02 Score=27.01 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=31.2
Q ss_pred CHHHHHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecC
Q 021907 227 GPDTVAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSA 268 (305)
Q Consensus 227 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 268 (305)
....+-+||+.+|.. .-+|.+..||.|++++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 455688999999965 468889999999998877777653
No 147
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=22.97 E-value=1.2e+02 Score=26.84 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=25.1
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeeeeecCC
Q 021907 225 TFGPDTVAEFLLKNDMDLVCRAHQVVEDG 253 (305)
Q Consensus 225 ~fg~~~~~~fl~~~~l~~iIRgH~~~~~G 253 (305)
.+|...+.+++++.+++++|.||.-...+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 57888899999999999999999887654
No 148
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=22.02 E-value=1.2e+02 Score=28.08 Aligned_cols=39 Identities=26% Similarity=0.453 Sum_probs=25.1
Q ss_pred cEEEeccccCCCCCcHHHH-HHHHHHhHhCCCcEEEECCCcccc
Q 021907 85 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRGNHECA 127 (305)
Q Consensus 85 ~~vfLGD~VDrG~~s~evl-~ll~~lk~~~p~~v~~lrGNHE~~ 127 (305)
+++|+||+|.+ ...+.+ ..|-.+|..++..+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999944 334433 45677777777665554 55543
No 149
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=21.85 E-value=4.2e+02 Score=25.64 Aligned_cols=11 Identities=18% Similarity=0.537 Sum_probs=5.2
Q ss_pred CCcEEEECCCc
Q 021907 114 PENFFLLRGNH 124 (305)
Q Consensus 114 p~~v~~lrGNH 124 (305)
|+.++++.|.+
T Consensus 396 ~~d~VLlkGSr 406 (417)
T TIGR01143 396 EGDVVLVKGSR 406 (417)
T ss_pred CCCEEEEEeCC
Confidence 44445555444
No 150
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=21.44 E-value=1.9e+02 Score=25.76 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=29.4
Q ss_pred HHHHHHhCCCcEEEEeeeeecCCeEEecCCeEEEEecCCCCC
Q 021907 231 VAEFLLKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 272 (305)
Q Consensus 231 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~y~ 272 (305)
+.+.|-..|+++||-||.-+..+++.. ++++| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEcccccc
Confidence 444444479999999999988899876 45665 68866654
No 151
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=20.78 E-value=3.8e+02 Score=25.96 Aligned_cols=65 Identities=18% Similarity=0.186 Sum_probs=44.0
Q ss_pred CcEEEEecCC-CCHHHHHHHHHhCCCCCCCcEEEeccccCCCCCcHHHHHHHHHHhHhCC-CcEEEE
Q 021907 56 APIKICGDIH-GQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLL 120 (305)
Q Consensus 56 ~~i~viGDiH-G~~~~L~~il~~~g~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p-~~v~~l 120 (305)
..+.||=|-+ .+.+.+.+.|+.+...+...++.+|+...-|.++.+.-..+......+. +.+++.
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~ 362 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLV 362 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 3577888855 4889998888876532345688899998888888766555544443444 555554
Done!