Query 021911
Match_columns 305
No_of_seqs 397 out of 2984
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:10:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021911.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021911hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4df3_A Fibrillarin-like rRNA/T 100.0 2E-48 7E-53 343.1 22.7 227 68-299 4-233 (233)
2 3id6_C Fibrillarin-like rRNA/T 100.0 3.6E-44 1.2E-48 316.5 24.5 225 69-298 5-231 (232)
3 2ipx_A RRNA 2'-O-methyltransfe 100.0 2.1E-35 7.2E-40 260.0 22.6 233 66-299 1-233 (233)
4 1nt2_A Fibrillarin-like PRE-rR 100.0 1.7E-32 5.9E-37 238.6 23.0 208 73-297 2-209 (210)
5 1fbn_A MJ fibrillarin homologu 100.0 2.8E-31 9.5E-36 233.4 26.0 221 74-300 8-230 (230)
6 1g8a_A Fibrillarin-like PRE-rR 100.0 1.4E-29 4.6E-34 221.6 26.3 224 69-298 2-227 (227)
7 3m4x_A NOL1/NOP2/SUN family pr 99.8 1E-20 3.5E-25 181.6 13.7 156 96-279 77-259 (456)
8 3ajd_A Putative methyltransfer 99.8 7E-20 2.4E-24 165.1 14.6 146 95-262 54-223 (274)
9 1ixk_A Methyltransferase; open 99.8 7E-20 2.4E-24 168.4 14.1 156 95-279 89-271 (315)
10 3m6w_A RRNA methylase; rRNA me 99.8 5E-20 1.7E-24 177.1 13.6 143 95-262 72-241 (464)
11 2b9e_A NOL1/NOP2/SUN domain fa 99.8 3.4E-19 1.1E-23 163.4 17.2 146 94-262 72-246 (309)
12 2frx_A Hypothetical protein YE 99.8 3.5E-19 1.2E-23 172.4 15.2 144 95-262 86-258 (479)
13 2yxl_A PH0851 protein, 450AA l 99.8 6.7E-19 2.3E-23 169.4 15.6 178 75-279 206-415 (450)
14 4fzv_A Putative methyltransfer 99.8 6.7E-19 2.3E-23 164.1 12.8 126 125-262 136-296 (359)
15 1sqg_A SUN protein, FMU protei 99.8 1.1E-17 3.9E-22 159.8 19.1 197 75-299 193-428 (429)
16 3dh0_A SAM dependent methyltra 99.7 1.4E-15 4.7E-20 131.2 19.0 154 140-300 34-195 (219)
17 4gek_A TRNA (CMO5U34)-methyltr 99.7 5E-16 1.7E-20 139.0 16.1 104 140-249 67-179 (261)
18 3eey_A Putative rRNA methylase 99.7 5.7E-16 1.9E-20 131.7 13.5 159 140-302 19-192 (197)
19 1nkv_A Hypothetical protein YJ 99.7 2.7E-15 9.1E-20 132.5 16.0 155 118-282 14-186 (256)
20 3kkz_A Uncharacterized protein 99.6 4.5E-15 1.6E-19 132.2 17.4 156 121-284 26-197 (267)
21 3mti_A RRNA methylase; SAM-dep 99.6 1.8E-15 6.2E-20 127.3 13.3 138 140-284 19-170 (185)
22 2frn_A Hypothetical protein PH 99.6 4.8E-15 1.6E-19 133.7 16.7 146 141-298 123-276 (278)
23 3dtn_A Putative methyltransfer 99.6 1E-14 3.6E-19 127.0 18.3 116 125-248 28-148 (234)
24 3i9f_A Putative type 11 methyl 99.6 3.2E-15 1.1E-19 124.0 13.8 145 140-302 14-164 (170)
25 3lpm_A Putative methyltransfer 99.6 1E-14 3.5E-19 129.8 17.5 145 140-298 45-219 (259)
26 2pwy_A TRNA (adenine-N(1)-)-me 99.6 9.1E-15 3.1E-19 129.1 16.6 128 140-282 93-223 (258)
27 3f4k_A Putative methyltransfer 99.6 1.8E-14 6E-19 127.2 18.1 156 121-284 26-197 (257)
28 3e05_A Precorrin-6Y C5,15-meth 99.6 1.3E-14 4.5E-19 124.1 16.0 123 140-276 37-161 (204)
29 1xdz_A Methyltransferase GIDB; 99.6 2.2E-14 7.4E-19 126.2 17.0 149 141-299 68-220 (240)
30 4fsd_A Arsenic methyltransfera 99.6 7.3E-15 2.5E-19 138.3 14.8 144 141-285 81-253 (383)
31 3evz_A Methyltransferase; NYSG 99.6 3.3E-14 1.1E-18 123.6 17.9 130 140-282 52-205 (230)
32 3h2b_A SAM-dependent methyltra 99.6 1.1E-14 3.8E-19 124.1 14.1 146 144-302 42-199 (203)
33 3grz_A L11 mtase, ribosomal pr 99.6 2E-14 6.8E-19 122.9 15.7 139 141-300 58-198 (205)
34 1yb2_A Hypothetical protein TA 99.6 1.7E-14 5.9E-19 129.5 15.6 128 139-282 106-236 (275)
35 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.5E-14 8.7E-19 123.4 14.9 129 141-281 39-180 (214)
36 3dlc_A Putative S-adenosyl-L-m 99.6 2E-14 6.9E-19 123.1 14.1 118 121-248 25-148 (219)
37 3ujc_A Phosphoethanolamine N-m 99.6 3.6E-14 1.2E-18 125.5 16.0 147 125-284 40-207 (266)
38 3g89_A Ribosomal RNA small sub 99.6 4E-14 1.4E-18 125.7 15.7 147 141-297 78-228 (249)
39 3tfw_A Putative O-methyltransf 99.6 5E-14 1.7E-18 124.7 16.2 107 141-248 61-170 (248)
40 3njr_A Precorrin-6Y methylase; 99.6 4.8E-14 1.7E-18 121.2 15.2 123 140-280 52-177 (204)
41 1pjz_A Thiopurine S-methyltran 99.6 2E-14 6.8E-19 123.4 12.5 137 140-283 19-176 (203)
42 3e8s_A Putative SAM dependent 99.6 2.3E-14 7.9E-19 123.4 12.9 149 141-297 50-226 (227)
43 2b3t_A Protein methyltransfera 99.6 5.1E-14 1.8E-18 126.4 15.7 140 122-281 92-261 (276)
44 3dou_A Ribosomal RNA large sub 99.6 1.5E-14 5E-19 123.4 11.5 155 124-301 5-184 (191)
45 3g5l_A Putative S-adenosylmeth 99.6 9.7E-14 3.3E-18 122.4 17.0 103 140-249 41-146 (253)
46 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.6E-14 9E-19 123.7 13.0 127 142-280 37-176 (213)
47 1xtp_A LMAJ004091AAA; SGPP, st 99.6 5.8E-14 2E-18 123.5 15.0 147 139-291 89-246 (254)
48 3k6r_A Putative transferase PH 99.6 1.3E-13 4.3E-18 124.3 17.3 159 121-296 108-274 (278)
49 2a14_A Indolethylamine N-methy 99.6 2.6E-14 9E-19 127.5 12.8 158 140-300 52-262 (263)
50 3vc1_A Geranyl diphosphate 2-C 99.6 6.8E-14 2.3E-18 127.7 15.8 138 141-284 115-270 (312)
51 3e23_A Uncharacterized protein 99.6 2.6E-14 8.9E-19 122.6 12.3 151 140-302 40-205 (211)
52 4hg2_A Methyltransferase type 99.6 1.6E-14 5.4E-19 128.9 11.3 115 118-248 18-135 (257)
53 3ou2_A SAM-dependent methyltra 99.6 1.1E-13 3.9E-18 118.6 16.3 98 140-249 43-147 (218)
54 1jsx_A Glucose-inhibited divis 99.6 1E-13 3.6E-18 118.4 15.6 137 143-298 65-205 (207)
55 3mb5_A SAM-dependent methyltra 99.6 4.3E-14 1.5E-18 124.9 13.6 127 140-282 90-221 (255)
56 3p9n_A Possible methyltransfer 99.6 2.6E-14 8.9E-19 120.9 11.6 124 122-249 23-154 (189)
57 3pfg_A N-methyltransferase; N, 99.5 3.7E-14 1.3E-18 125.9 12.6 96 141-248 48-151 (263)
58 3hnr_A Probable methyltransfer 99.5 1.6E-13 5.4E-18 118.3 16.2 145 141-303 43-217 (220)
59 3bus_A REBM, methyltransferase 99.5 2E-13 6.9E-18 121.6 17.3 141 138-284 56-217 (273)
60 1o54_A SAM-dependent O-methylt 99.5 1.9E-13 6.5E-18 122.7 17.1 127 140-282 109-238 (277)
61 1i9g_A Hypothetical protein RV 99.5 1.7E-13 5.8E-18 122.7 16.8 127 140-281 96-228 (280)
62 3gu3_A Methyltransferase; alph 99.5 1.7E-13 5.8E-18 123.4 16.9 119 125-250 6-128 (284)
63 2gb4_A Thiopurine S-methyltran 99.5 1.2E-13 4.1E-18 122.9 15.5 140 141-286 66-230 (252)
64 3l8d_A Methyltransferase; stru 99.5 1.3E-13 4.3E-18 120.5 15.5 131 141-282 51-199 (242)
65 3ofk_A Nodulation protein S; N 99.5 6.7E-14 2.3E-18 120.4 13.4 149 140-301 48-206 (216)
66 2ozv_A Hypothetical protein AT 99.5 1.5E-13 5.1E-18 122.6 15.8 146 140-298 33-212 (260)
67 3dli_A Methyltransferase; PSI- 99.5 5.6E-14 1.9E-18 123.1 12.8 151 125-288 25-189 (240)
68 3duw_A OMT, O-methyltransferas 99.5 1.3E-13 4.5E-18 119.3 15.0 107 141-248 56-167 (223)
69 3mq2_A 16S rRNA methyltransfer 99.5 8.9E-14 3E-18 120.0 13.3 138 140-283 24-184 (218)
70 2b25_A Hypothetical protein; s 99.5 2.2E-13 7.6E-18 125.7 16.8 105 140-248 102-219 (336)
71 1vl5_A Unknown conserved prote 99.5 2.2E-13 7.6E-18 120.6 15.9 102 140-248 34-140 (260)
72 1l3i_A Precorrin-6Y methyltran 99.5 1.4E-13 4.7E-18 115.3 13.8 134 126-278 19-155 (192)
73 3a27_A TYW2, uncharacterized p 99.5 9.1E-14 3.1E-18 124.9 13.3 102 140-248 116-219 (272)
74 3ege_A Putative methyltransfer 99.5 9.2E-14 3.2E-18 123.6 13.0 143 126-283 20-178 (261)
75 1xxl_A YCGJ protein; structura 99.5 2.1E-13 7.3E-18 119.5 15.1 102 140-248 18-124 (239)
76 3g07_A 7SK snRNA methylphospha 99.5 1.2E-13 4.1E-18 125.2 13.8 140 143-284 46-270 (292)
77 2o57_A Putative sarcosine dime 99.5 2.6E-13 8.9E-18 122.5 16.0 139 140-284 79-235 (297)
78 3lcc_A Putative methyl chlorid 99.5 2.1E-13 7.1E-18 119.0 14.7 132 144-283 67-207 (235)
79 3jwg_A HEN1, methyltransferase 99.5 4.1E-13 1.4E-17 115.7 16.4 120 121-248 10-141 (219)
80 3ocj_A Putative exported prote 99.5 8.3E-14 2.8E-18 126.7 12.4 151 140-297 115-303 (305)
81 2i62_A Nicotinamide N-methyltr 99.5 4E-13 1.4E-17 118.7 16.5 157 141-300 54-263 (265)
82 1ve3_A Hypothetical protein PH 99.5 3.8E-13 1.3E-17 116.2 15.8 102 141-249 36-143 (227)
83 3hem_A Cyclopropane-fatty-acyl 99.5 2.2E-13 7.4E-18 123.6 15.0 104 137-249 66-184 (302)
84 4htf_A S-adenosylmethionine-de 99.5 2.6E-13 9.1E-18 121.9 15.3 101 143-249 68-174 (285)
85 3fpf_A Mtnas, putative unchara 99.5 1.2E-13 4E-18 125.2 12.9 144 140-301 119-267 (298)
86 1dus_A MJ0882; hypothetical pr 99.5 2.8E-13 9.5E-18 113.6 14.4 101 140-248 49-157 (194)
87 1y8c_A S-adenosylmethionine-de 99.5 4.1E-13 1.4E-17 117.1 16.0 100 142-249 36-143 (246)
88 3hp7_A Hemolysin, putative; st 99.5 9.5E-14 3.3E-18 125.7 12.1 167 123-297 64-249 (291)
89 3orh_A Guanidinoacetate N-meth 99.5 3.8E-14 1.3E-18 124.6 9.3 135 141-279 58-206 (236)
90 2p35_A Trans-aconitate 2-methy 99.5 1.2E-13 4.3E-18 121.7 12.3 117 120-249 13-133 (259)
91 2xvm_A Tellurite resistance pr 99.5 2E-13 6.8E-18 115.4 13.0 100 141-248 30-136 (199)
92 3tma_A Methyltransferase; thum 99.5 2.4E-13 8.1E-18 126.5 14.6 142 123-284 186-340 (354)
93 2plw_A Ribosomal RNA methyltra 99.5 2E-13 6.8E-18 116.1 12.9 98 141-248 20-154 (201)
94 3mgg_A Methyltransferase; NYSG 99.5 3.7E-13 1.3E-17 120.1 15.2 105 140-249 34-143 (276)
95 2ex4_A Adrenal gland protein A 99.5 2.2E-13 7.4E-18 119.4 13.2 141 142-288 78-230 (241)
96 3sm3_A SAM-dependent methyltra 99.5 3.1E-13 1.1E-17 117.0 14.0 102 141-249 28-142 (235)
97 3dxy_A TRNA (guanine-N(7)-)-me 99.5 5.4E-14 1.8E-18 122.4 9.2 106 141-248 32-150 (218)
98 3cgg_A SAM-dependent methyltra 99.5 3.9E-13 1.3E-17 112.8 14.1 139 141-297 44-194 (195)
99 3r3h_A O-methyltransferase, SA 99.5 8.3E-14 2.8E-18 123.0 10.3 107 141-248 58-170 (242)
100 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.1E-13 1.4E-17 111.6 14.0 125 140-279 22-149 (178)
101 3u81_A Catechol O-methyltransf 99.5 3.7E-13 1.3E-17 116.7 14.0 149 141-300 56-215 (221)
102 3ccf_A Cyclopropane-fatty-acyl 99.5 7.9E-14 2.7E-18 125.0 10.0 98 140-249 54-155 (279)
103 2kw5_A SLR1183 protein; struct 99.5 6.5E-13 2.2E-17 113.0 15.1 133 141-282 28-170 (202)
104 2p7i_A Hypothetical protein; p 99.5 3.6E-13 1.2E-17 117.5 13.8 96 142-249 41-142 (250)
105 3bxo_A N,N-dimethyltransferase 99.5 5E-13 1.7E-17 116.3 14.6 95 142-248 39-141 (239)
106 3bkw_A MLL3908 protein, S-aden 99.5 5.2E-13 1.8E-17 116.5 14.5 100 140-249 40-145 (243)
107 3tr6_A O-methyltransferase; ce 99.5 8.8E-14 3E-18 120.5 9.2 107 141-248 62-174 (225)
108 3jwh_A HEN1; methyltransferase 99.5 8.7E-13 3E-17 113.6 15.4 103 141-248 27-141 (217)
109 3ntv_A MW1564 protein; rossman 99.5 1.9E-13 6.6E-18 119.6 11.4 104 141-248 69-176 (232)
110 1kpg_A CFA synthase;, cyclopro 99.5 1.3E-12 4.6E-17 117.2 17.2 104 137-249 58-169 (287)
111 2nxc_A L11 mtase, ribosomal pr 99.5 5.2E-13 1.8E-17 118.6 14.2 135 141-296 118-253 (254)
112 4dzr_A Protein-(glutamine-N5) 99.5 5.3E-14 1.8E-18 120.1 7.4 161 123-299 12-206 (215)
113 3q87_B N6 adenine specific DNA 99.5 5E-13 1.7E-17 111.4 13.2 131 142-300 22-164 (170)
114 1vlm_A SAM-dependent methyltra 99.5 5.2E-13 1.8E-17 115.4 13.5 124 143-282 47-187 (219)
115 3g2m_A PCZA361.24; SAM-depende 99.5 5.2E-13 1.8E-17 120.9 13.9 98 144-249 83-191 (299)
116 2esr_A Methyltransferase; stru 99.5 1.3E-13 4.6E-18 114.9 9.1 119 123-248 13-138 (177)
117 2fk8_A Methoxy mycolic acid sy 99.5 1.3E-12 4.3E-17 119.3 16.4 104 137-249 84-195 (318)
118 3g5t_A Trans-aconitate 3-methy 99.5 1.7E-13 5.8E-18 124.2 10.5 108 140-248 33-149 (299)
119 1ej0_A FTSJ; methyltransferase 99.5 3.8E-13 1.3E-17 110.8 11.8 140 140-299 19-179 (180)
120 1inl_A Spermidine synthase; be 99.5 1.6E-12 5.6E-17 118.1 17.0 148 143-300 90-254 (296)
121 3ckk_A TRNA (guanine-N(7)-)-me 99.5 4.7E-13 1.6E-17 117.8 12.9 106 141-248 44-168 (235)
122 1zx0_A Guanidinoacetate N-meth 99.5 2.5E-13 8.5E-18 118.9 10.8 133 141-277 58-204 (236)
123 1ri5_A MRNA capping enzyme; me 99.5 7.6E-13 2.6E-17 118.9 14.0 105 140-249 61-175 (298)
124 3d2l_A SAM-dependent methyltra 99.5 1.6E-12 5.4E-17 113.4 15.5 99 141-248 31-137 (243)
125 2pxx_A Uncharacterized protein 99.5 1.4E-12 4.9E-17 111.3 14.9 102 141-248 40-159 (215)
126 3bwc_A Spermidine synthase; SA 99.4 4.4E-12 1.5E-16 115.7 18.8 149 142-298 94-258 (304)
127 3p2e_A 16S rRNA methylase; met 99.4 4.3E-13 1.5E-17 117.2 11.3 137 141-284 22-186 (225)
128 2yxd_A Probable cobalt-precorr 99.4 1.8E-12 6.2E-17 107.7 14.7 132 126-280 21-154 (183)
129 2gpy_A O-methyltransferase; st 99.4 3.4E-13 1.2E-17 117.7 10.5 107 140-248 51-160 (233)
130 2igt_A SAM dependent methyltra 99.4 8.2E-13 2.8E-17 122.1 13.5 149 142-298 152-325 (332)
131 3kr9_A SAM-dependent methyltra 99.4 2.2E-12 7.6E-17 112.6 15.4 142 140-297 12-157 (225)
132 3dr5_A Putative O-methyltransf 99.4 2E-13 6.8E-18 119.0 8.7 105 142-248 55-163 (221)
133 2fhp_A Methylase, putative; al 99.4 1.8E-13 6E-18 114.7 8.1 123 121-248 24-154 (187)
134 1wzn_A SAM-dependent methyltra 99.4 1.9E-12 6.6E-17 113.8 15.1 101 140-248 38-145 (252)
135 2ift_A Putative methylase HI07 99.4 1.6E-13 5.6E-18 117.5 7.9 120 123-248 35-163 (201)
136 2bm8_A Cephalosporin hydroxyla 99.4 2.2E-13 7.4E-18 119.9 8.9 101 143-248 81-187 (236)
137 3lec_A NADB-rossmann superfami 99.4 2.9E-12 9.8E-17 112.1 15.8 143 140-298 18-164 (230)
138 1i1n_A Protein-L-isoaspartate 99.4 5.7E-13 2E-17 115.5 11.1 102 140-248 74-182 (226)
139 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.3E-17 114.7 14.0 106 141-248 47-173 (246)
140 3m33_A Uncharacterized protein 99.4 4E-13 1.4E-17 116.8 10.1 132 123-281 32-165 (226)
141 3cc8_A Putative methyltransfer 99.4 3.4E-12 1.2E-16 109.9 15.8 133 142-284 31-186 (230)
142 3bkx_A SAM-dependent methyltra 99.4 1.7E-12 5.7E-17 115.7 14.1 111 137-249 37-160 (275)
143 4dcm_A Ribosomal RNA large sub 99.4 5.7E-13 1.9E-17 125.1 11.4 103 140-248 219-334 (375)
144 4dmg_A Putative uncharacterize 99.4 1.2E-12 4E-17 123.6 13.5 102 141-248 212-326 (393)
145 2g72_A Phenylethanolamine N-me 99.4 1.5E-12 5.3E-17 117.2 13.6 140 142-284 70-257 (289)
146 3m70_A Tellurite resistance pr 99.4 2.5E-12 8.6E-17 115.5 14.6 100 141-248 118-223 (286)
147 3dmg_A Probable ribosomal RNA 99.4 3.7E-13 1.3E-17 126.6 9.0 100 142-248 232-340 (381)
148 3c3p_A Methyltransferase; NP_9 99.4 3.4E-13 1.2E-17 115.8 8.0 103 142-248 55-160 (210)
149 2b78_A Hypothetical protein SM 99.4 2.4E-12 8.3E-17 121.2 14.4 134 142-283 211-362 (385)
150 2fpo_A Methylase YHHF; structu 99.4 3.5E-13 1.2E-17 115.5 7.9 120 122-248 35-160 (202)
151 2r3s_A Uncharacterized protein 99.4 6.2E-12 2.1E-16 115.3 16.6 147 142-298 164-335 (335)
152 3adn_A Spermidine synthase; am 99.4 1E-11 3.5E-16 112.8 17.8 148 142-299 82-246 (294)
153 3gnl_A Uncharacterized protein 99.4 5.2E-12 1.8E-16 111.4 15.1 143 140-298 18-164 (244)
154 1nv8_A HEMK protein; class I a 99.4 1.7E-12 5.8E-17 117.3 12.3 117 121-248 104-249 (284)
155 1sui_A Caffeoyl-COA O-methyltr 99.4 6E-13 2E-17 117.9 8.7 107 141-248 77-190 (247)
156 1uwv_A 23S rRNA (uracil-5-)-me 99.4 8.3E-12 2.8E-16 119.3 17.3 153 127-297 273-429 (433)
157 3c3y_A Pfomt, O-methyltransfer 99.4 8.1E-13 2.8E-17 116.2 9.4 107 141-248 68-181 (237)
158 2yqz_A Hypothetical protein TT 99.4 1.2E-12 4.2E-17 115.5 10.3 102 140-248 36-141 (263)
159 3uwp_A Histone-lysine N-methyl 99.4 1.2E-12 4.1E-17 123.2 10.6 114 136-252 166-292 (438)
160 3mcz_A O-methyltransferase; ad 99.4 1.7E-11 5.8E-16 113.5 18.4 153 136-298 171-349 (352)
161 1qzz_A RDMB, aclacinomycin-10- 99.4 1.6E-11 5.4E-16 114.5 17.9 154 140-301 179-359 (374)
162 2zfu_A Nucleomethylin, cerebra 99.4 4.4E-12 1.5E-16 108.9 12.8 128 141-301 65-194 (215)
163 2hnk_A SAM-dependent O-methylt 99.4 5.9E-12 2E-16 110.3 13.9 108 140-248 57-181 (239)
164 2avd_A Catechol-O-methyltransf 99.4 1.2E-12 4.2E-17 113.5 9.3 107 141-248 67-179 (229)
165 2p8j_A S-adenosylmethionine-de 99.4 3.8E-12 1.3E-16 108.5 12.2 104 140-249 20-129 (209)
166 2nyu_A Putative ribosomal RNA 99.4 1.8E-12 6.1E-17 109.6 10.0 99 140-248 19-145 (196)
167 1wxx_A TT1595, hypothetical pr 99.4 2E-12 6.8E-17 121.6 11.1 102 143-248 209-325 (382)
168 1mjf_A Spermidine synthase; sp 99.4 1.8E-11 6E-16 110.4 16.7 145 142-298 74-239 (281)
169 4e2x_A TCAB9; kijanose, tetron 99.4 4.4E-12 1.5E-16 120.2 13.3 164 121-296 88-266 (416)
170 1ws6_A Methyltransferase; stru 99.4 9E-13 3.1E-17 108.6 7.5 121 123-248 22-147 (171)
171 3c0k_A UPF0064 protein YCCW; P 99.4 6.6E-12 2.3E-16 118.6 14.3 104 142-248 219-339 (396)
172 1uir_A Polyamine aminopropyltr 99.4 1.3E-11 4.6E-16 113.0 15.8 148 142-298 76-242 (314)
173 2gs9_A Hypothetical protein TT 99.4 1.8E-12 6.1E-17 111.0 9.3 94 143-249 36-133 (211)
174 2pbf_A Protein-L-isoaspartate 99.4 1.4E-12 4.7E-17 113.2 8.6 106 140-249 77-194 (227)
175 3cbg_A O-methyltransferase; cy 99.4 1.2E-12 4.1E-17 114.6 8.3 107 141-248 70-182 (232)
176 3lbf_A Protein-L-isoaspartate 99.4 3.8E-12 1.3E-16 108.9 11.1 100 140-249 74-175 (210)
177 3dp7_A SAM-dependent methyltra 99.4 8.2E-12 2.8E-16 116.5 14.3 101 142-248 178-287 (363)
178 3v97_A Ribosomal RNA large sub 99.4 5.7E-12 2E-16 127.2 14.0 122 142-278 538-677 (703)
179 1iy9_A Spermidine synthase; ro 99.3 2.1E-11 7.2E-16 109.6 16.2 148 143-300 75-238 (275)
180 2yvl_A TRMI protein, hypotheti 99.3 1E-11 3.5E-16 108.7 13.6 100 140-248 88-190 (248)
181 2o07_A Spermidine synthase; st 99.3 2.9E-11 1E-15 110.3 16.9 147 142-298 94-256 (304)
182 3gwz_A MMCR; methyltransferase 99.3 5.5E-11 1.9E-15 111.1 19.2 146 140-297 199-368 (369)
183 3i53_A O-methyltransferase; CO 99.3 2.4E-11 8.1E-16 111.7 16.4 149 137-297 163-331 (332)
184 2vdw_A Vaccinia virus capping 99.3 4.9E-12 1.7E-16 115.3 11.4 105 142-249 47-170 (302)
185 2i7c_A Spermidine synthase; tr 99.3 6E-11 2E-15 107.1 18.4 147 142-298 77-239 (283)
186 3gjy_A Spermidine synthase; AP 99.3 3.5E-12 1.2E-16 116.7 10.4 143 145-301 91-250 (317)
187 3bgv_A MRNA CAP guanine-N7 met 99.3 5.2E-12 1.8E-16 115.1 11.3 121 125-249 17-156 (313)
188 2yxe_A Protein-L-isoaspartate 99.3 9.6E-12 3.3E-16 106.8 12.3 102 140-248 74-177 (215)
189 1x19_A CRTF-related protein; m 99.3 3E-11 1E-15 112.2 16.4 146 140-297 187-358 (359)
190 2yx1_A Hypothetical protein MJ 99.3 5.6E-12 1.9E-16 116.6 11.3 96 141-248 193-291 (336)
191 3ggd_A SAM-dependent methyltra 99.3 2.9E-12 1E-16 112.2 8.9 104 140-248 53-163 (245)
192 1tw3_A COMT, carminomycin 4-O- 99.3 4.2E-11 1.4E-15 111.1 17.1 150 140-298 180-356 (360)
193 2pt6_A Spermidine synthase; tr 99.3 5.3E-11 1.8E-15 109.4 17.4 147 142-298 115-277 (321)
194 3thr_A Glycine N-methyltransfe 99.3 3E-12 1E-16 115.2 8.8 105 141-249 55-176 (293)
195 2as0_A Hypothetical protein PH 99.3 3.1E-12 1.1E-16 120.8 9.3 104 142-248 216-335 (396)
196 3reo_A (ISO)eugenol O-methyltr 99.3 6E-11 2.1E-15 110.9 18.0 141 141-297 201-366 (368)
197 2xyq_A Putative 2'-O-methyl tr 99.3 5.2E-12 1.8E-16 114.4 10.2 131 139-297 59-210 (290)
198 2h00_A Methyltransferase 10 do 99.3 2.9E-12 9.9E-17 113.2 8.1 79 143-222 65-149 (254)
199 1xj5_A Spermidine synthase 1; 99.3 4.4E-11 1.5E-15 110.5 16.0 148 142-298 119-283 (334)
200 3bt7_A TRNA (uracil-5-)-methyl 99.3 8.2E-12 2.8E-16 116.9 11.2 128 144-288 214-356 (369)
201 1r18_A Protein-L-isoaspartate( 99.3 5.2E-12 1.8E-16 109.7 9.1 102 140-248 81-194 (227)
202 1wy7_A Hypothetical protein PH 99.3 4.5E-11 1.5E-15 101.9 14.7 121 140-280 46-172 (207)
203 3tm4_A TRNA (guanine N2-)-meth 99.3 5.7E-11 2E-15 111.3 16.6 139 122-283 200-352 (373)
204 1dl5_A Protein-L-isoaspartate 99.3 9E-12 3.1E-16 114.1 10.8 102 140-248 72-175 (317)
205 3gdh_A Trimethylguanosine synt 99.3 2.1E-13 7.1E-18 119.5 -0.3 100 141-248 76-181 (241)
206 3opn_A Putative hemolysin; str 99.3 3.9E-12 1.3E-16 111.7 7.7 156 136-298 29-202 (232)
207 2ip2_A Probable phenazine-spec 99.3 1.1E-10 3.8E-15 107.2 17.7 145 140-297 165-333 (334)
208 3bzb_A Uncharacterized protein 99.3 4.2E-11 1.4E-15 107.8 14.6 147 125-281 64-235 (281)
209 2p41_A Type II methyltransfera 99.3 3.3E-12 1.1E-16 116.7 7.3 110 125-248 64-191 (305)
210 1p91_A Ribosomal RNA large sub 99.3 7.4E-12 2.5E-16 111.3 9.3 95 142-249 84-179 (269)
211 3iv6_A Putative Zn-dependent a 99.3 5.5E-12 1.9E-16 112.6 7.8 103 140-249 42-149 (261)
212 3sso_A Methyltransferase; macr 99.3 1.7E-11 5.9E-16 114.9 11.4 101 142-250 215-326 (419)
213 4a6d_A Hydroxyindole O-methylt 99.3 1.3E-10 4.3E-15 108.1 17.2 150 140-300 176-348 (353)
214 3p9c_A Caffeic acid O-methyltr 99.3 1.3E-10 4.6E-15 108.4 17.5 139 141-295 199-362 (364)
215 1vbf_A 231AA long hypothetical 99.3 3.5E-11 1.2E-15 104.4 12.5 109 127-248 57-165 (231)
216 2oxt_A Nucleoside-2'-O-methylt 99.3 1.4E-12 4.7E-17 116.8 3.0 109 125-248 56-185 (265)
217 2jjq_A Uncharacterized RNA met 99.3 2.1E-11 7.1E-16 116.2 11.1 128 141-290 288-416 (425)
218 2qe6_A Uncharacterized protein 99.3 6.4E-11 2.2E-15 106.4 13.7 105 143-249 77-197 (274)
219 3lst_A CALO1 methyltransferase 99.3 3.5E-11 1.2E-15 111.5 12.3 142 139-296 180-346 (348)
220 2b2c_A Spermidine synthase; be 99.3 5.8E-11 2E-15 108.8 13.5 146 143-298 108-269 (314)
221 2avn_A Ubiquinone/menaquinone 99.2 2.4E-11 8.1E-16 107.7 10.1 96 143-249 54-153 (260)
222 1fp2_A Isoflavone O-methyltran 99.2 5.4E-11 1.9E-15 110.3 13.0 139 141-295 186-350 (352)
223 2wa2_A Non-structural protein 99.2 2.2E-12 7.5E-17 116.2 3.4 110 124-248 63-193 (276)
224 2cmg_A Spermidine synthase; tr 99.2 2.4E-10 8.1E-15 102.1 16.6 135 143-299 72-217 (262)
225 1o9g_A RRNA methyltransferase; 99.2 2.3E-11 8E-16 107.2 9.6 106 142-248 50-214 (250)
226 3htx_A HEN1; HEN1, small RNA m 99.2 3.4E-10 1.2E-14 114.1 19.0 105 141-250 719-836 (950)
227 1u2z_A Histone-lysine N-methyl 99.2 5.7E-11 1.9E-15 113.1 12.9 117 127-248 229-359 (433)
228 2y1w_A Histone-arginine methyl 99.2 5.7E-11 1.9E-15 110.3 12.4 101 140-248 47-155 (348)
229 1fp1_D Isoliquiritigenin 2'-O- 99.2 1.7E-10 5.7E-15 107.8 15.6 95 141-248 207-306 (372)
230 1jg1_A PIMT;, protein-L-isoasp 99.2 3.9E-11 1.3E-15 104.8 10.5 111 127-249 78-190 (235)
231 3q7e_A Protein arginine N-meth 99.2 4E-11 1.4E-15 111.4 11.0 102 140-248 63-173 (349)
232 2aot_A HMT, histamine N-methyl 99.2 3.6E-11 1.2E-15 108.5 10.3 107 141-248 50-172 (292)
233 2qm3_A Predicted methyltransfe 99.2 4.2E-10 1.4E-14 105.3 17.0 103 142-248 171-278 (373)
234 2fyt_A Protein arginine N-meth 99.2 1E-10 3.5E-15 108.2 12.4 100 140-246 61-169 (340)
235 3r0q_C Probable protein argini 99.2 3.8E-11 1.3E-15 112.6 9.5 101 140-248 60-169 (376)
236 2f8l_A Hypothetical protein LM 99.2 2.2E-10 7.4E-15 106.0 14.3 105 141-250 128-258 (344)
237 3b3j_A Histone-arginine methyl 99.2 7.7E-11 2.6E-15 114.0 11.4 101 140-248 155-263 (480)
238 2pjd_A Ribosomal RNA small sub 99.2 3.6E-11 1.2E-15 111.3 8.2 101 141-248 194-303 (343)
239 1ne2_A Hypothetical protein TA 99.2 2.4E-10 8.3E-15 97.0 12.6 92 140-247 48-145 (200)
240 2ld4_A Anamorsin; methyltransf 99.2 7.1E-11 2.4E-15 98.3 9.0 116 138-275 7-128 (176)
241 2ih2_A Modification methylase 99.2 1.7E-10 5.8E-15 109.1 12.5 110 127-250 26-166 (421)
242 1g6q_1 HnRNP arginine N-methyl 99.1 1.5E-10 5.1E-15 106.6 10.9 101 140-247 35-144 (328)
243 1zg3_A Isoflavanone 4'-O-methy 99.1 2.4E-10 8.1E-15 106.2 12.3 139 141-295 191-356 (358)
244 4hc4_A Protein arginine N-meth 99.1 1.3E-10 4.3E-15 108.9 10.0 99 141-247 81-188 (376)
245 2qfm_A Spermine synthase; sper 99.1 2.5E-09 8.6E-14 99.1 17.8 147 143-300 188-363 (364)
246 3fzg_A 16S rRNA methylase; met 99.1 3.4E-10 1.2E-14 95.8 10.3 134 141-283 47-187 (200)
247 1zq9_A Probable dimethyladenos 99.1 3.7E-10 1.2E-14 102.0 10.9 83 140-230 25-110 (285)
248 1af7_A Chemotaxis receptor met 99.1 3.2E-10 1.1E-14 101.9 10.4 103 143-248 105-252 (274)
249 3evf_A RNA-directed RNA polyme 99.1 2.1E-10 7.1E-15 102.0 7.3 116 124-248 55-184 (277)
250 3axs_A Probable N(2),N(2)-dime 99.0 1.6E-10 5.5E-15 108.8 6.4 103 142-248 51-158 (392)
251 2px2_A Genome polyprotein [con 99.0 9.8E-11 3.3E-15 102.7 4.3 112 123-248 53-183 (269)
252 2dul_A N(2),N(2)-dimethylguano 99.0 3.3E-10 1.1E-14 106.3 8.1 100 143-247 47-163 (378)
253 3ldg_A Putative uncharacterize 99.0 2.2E-09 7.6E-14 100.9 13.6 120 122-248 176-343 (384)
254 3k0b_A Predicted N6-adenine-sp 99.0 2.1E-09 7.2E-14 101.3 12.1 119 122-248 183-350 (393)
255 3ldu_A Putative methylase; str 99.0 1E-09 3.5E-14 103.3 9.9 120 122-248 177-344 (385)
256 4auk_A Ribosomal RNA large sub 99.0 1.1E-08 3.8E-13 94.9 16.4 145 140-300 208-357 (375)
257 2h1r_A Dimethyladenosine trans 99.0 3.2E-09 1.1E-13 96.4 11.6 83 140-230 39-123 (299)
258 3tqs_A Ribosomal RNA small sub 99.0 8.9E-09 3E-13 91.5 14.2 88 140-231 26-114 (255)
259 3giw_A Protein of unknown func 99.0 5.1E-09 1.7E-13 93.7 12.6 101 144-249 79-201 (277)
260 3gru_A Dimethyladenosine trans 99.0 8E-09 2.7E-13 93.7 13.5 96 127-231 37-132 (295)
261 3gcz_A Polyprotein; flavivirus 98.9 2.6E-10 8.8E-15 101.6 2.9 116 124-248 71-201 (282)
262 2okc_A Type I restriction enzy 98.9 3E-09 1E-13 101.8 9.9 106 140-250 168-309 (445)
263 3p8z_A Mtase, non-structural p 98.9 1.5E-08 5.3E-13 87.6 11.1 116 124-248 59-186 (267)
264 1qam_A ERMC' methyltransferase 98.8 4.1E-08 1.4E-12 86.4 13.4 105 127-241 17-121 (244)
265 2ar0_A M.ecoki, type I restric 98.8 9.9E-09 3.4E-13 100.6 10.2 108 140-250 166-314 (541)
266 3o4f_A Spermidine synthase; am 98.8 1.4E-07 4.7E-12 85.2 16.4 146 144-299 84-246 (294)
267 3uzu_A Ribosomal RNA small sub 98.8 6.4E-08 2.2E-12 87.0 13.3 90 140-231 39-132 (279)
268 3v97_A Ribosomal RNA large sub 98.8 2.8E-08 9.6E-13 100.3 11.8 122 122-248 172-347 (703)
269 1yub_A Ermam, rRNA methyltrans 98.8 4E-10 1.4E-14 99.3 -1.7 99 140-248 26-145 (245)
270 1m6y_A S-adenosyl-methyltransf 98.8 1.6E-08 5.5E-13 91.9 8.8 84 140-224 23-109 (301)
271 3lcv_B Sisomicin-gentamicin re 98.8 4.7E-08 1.6E-12 86.5 11.2 131 142-279 131-268 (281)
272 3ftd_A Dimethyladenosine trans 98.8 6.7E-08 2.3E-12 85.4 12.2 84 140-231 28-113 (249)
273 3lkd_A Type I restriction-modi 98.7 2.8E-07 9.6E-12 90.2 17.0 139 141-285 219-390 (542)
274 3c6k_A Spermine synthase; sper 98.7 1.4E-07 4.7E-12 87.8 13.7 144 143-300 205-380 (381)
275 3s1s_A Restriction endonucleas 98.7 2.4E-07 8.3E-12 93.3 15.7 138 142-285 320-498 (878)
276 3frh_A 16S rRNA methylase; met 98.7 2.9E-07 1E-11 80.6 14.0 132 142-283 104-241 (253)
277 2qy6_A UPF0209 protein YFCK; s 98.7 4.4E-08 1.5E-12 87.0 8.7 144 141-301 58-250 (257)
278 3lkz_A Non-structural protein 98.7 5.8E-08 2E-12 86.6 8.9 117 124-248 75-204 (321)
279 4gqb_A Protein arginine N-meth 98.7 7E-08 2.4E-12 95.6 10.4 96 144-245 358-464 (637)
280 1qyr_A KSGA, high level kasuga 98.7 7E-08 2.4E-12 85.5 9.0 85 140-231 18-108 (252)
281 3fut_A Dimethyladenosine trans 98.6 9.4E-08 3.2E-12 85.6 9.8 85 140-231 44-128 (271)
282 3eld_A Methyltransferase; flav 98.6 1.7E-08 5.7E-13 90.5 4.7 115 125-248 63-191 (300)
283 3r24_A NSP16, 2'-O-methyl tran 98.6 3.3E-07 1.1E-11 81.7 12.5 134 140-301 106-260 (344)
284 3khk_A Type I restriction-modi 98.6 1.2E-07 4E-12 93.0 9.5 152 141-300 243-448 (544)
285 4azs_A Methyltransferase WBDD; 98.6 3.8E-08 1.3E-12 97.0 5.1 101 143-248 66-173 (569)
286 3cvo_A Methyltransferase-like 98.5 4.5E-07 1.5E-11 77.5 10.7 98 142-246 29-152 (202)
287 3ll7_A Putative methyltransfer 98.5 4.5E-08 1.5E-12 92.4 4.5 77 142-222 92-172 (410)
288 2r6z_A UPF0341 protein in RSP 98.5 3E-08 1E-12 88.2 2.5 80 141-224 81-172 (258)
289 3ua3_A Protein arginine N-meth 98.5 1.5E-07 5.2E-12 93.5 7.3 101 144-245 410-531 (745)
290 3tka_A Ribosomal RNA small sub 98.5 3.2E-07 1.1E-11 83.8 8.2 79 140-222 54-137 (347)
291 3ufb_A Type I restriction-modi 98.4 9.9E-07 3.4E-11 86.1 10.5 139 140-284 214-393 (530)
292 2oyr_A UPF0341 protein YHIQ; a 98.3 3.3E-07 1.1E-11 81.4 4.6 80 140-224 83-175 (258)
293 2k4m_A TR8_protein, UPF0146 pr 98.3 6.7E-07 2.3E-11 72.0 5.8 87 141-248 33-121 (153)
294 3g7u_A Cytosine-specific methy 98.3 1E-05 3.5E-10 75.6 13.6 145 145-299 3-173 (376)
295 2wk1_A NOVP; transferase, O-me 98.2 8.1E-06 2.8E-10 73.3 10.7 104 143-248 106-244 (282)
296 1g55_A DNA cytosine methyltran 98.2 1.9E-05 6.3E-10 72.9 13.2 144 145-299 3-170 (343)
297 1wg8_A Predicted S-adenosylmet 98.1 1.1E-05 3.8E-10 72.0 9.0 78 140-222 19-98 (285)
298 3ubt_Y Modification methylase 98.0 6.5E-05 2.2E-09 68.4 12.8 144 145-299 1-164 (331)
299 2c7p_A Modification methylase 98.0 0.00019 6.6E-09 65.6 15.2 142 144-298 11-173 (327)
300 3b5i_A S-adenosyl-L-methionine 97.9 4.1E-05 1.4E-09 71.4 9.8 105 144-249 53-226 (374)
301 2efj_A 3,7-dimethylxanthine me 97.8 0.00024 8E-09 66.4 12.7 79 144-222 53-158 (384)
302 4h0n_A DNMT2; SAH binding, tra 97.8 0.00038 1.3E-08 63.9 13.5 144 145-300 4-171 (333)
303 2oo3_A Protein involved in cat 97.6 1.3E-05 4.3E-10 71.7 1.4 102 144-248 92-198 (283)
304 3qv2_A 5-cytosine DNA methyltr 97.5 0.0009 3.1E-08 61.2 12.7 144 144-299 10-181 (327)
305 1m6e_X S-adenosyl-L-methionnin 97.5 0.00018 6.1E-09 66.6 7.4 105 144-249 52-210 (359)
306 1i4w_A Mitochondrial replicati 97.4 0.00059 2E-08 63.0 8.9 61 143-205 58-118 (353)
307 3me5_A Cytosine-specific methy 97.3 0.002 6.9E-08 61.9 12.7 151 144-299 88-289 (482)
308 2zig_A TTHA0409, putative modi 97.2 0.00046 1.6E-08 62.0 6.8 59 124-189 220-278 (297)
309 3vyw_A MNMC2; tRNA wobble urid 97.2 0.0017 5.8E-08 58.7 10.2 141 142-300 95-262 (308)
310 3pvc_A TRNA 5-methylaminomethy 96.8 0.006 2.1E-07 61.1 10.6 126 142-281 57-231 (689)
311 2qrv_A DNA (cytosine-5)-methyl 96.5 0.0032 1.1E-07 56.7 5.9 145 142-298 14-182 (295)
312 4ft4_B DNA (cytosine-5)-methyl 96.5 0.029 9.8E-07 57.0 13.5 84 212-299 378-486 (784)
313 3swr_A DNA (cytosine-5)-methyl 96.4 0.028 9.7E-07 58.4 13.0 146 144-298 540-722 (1002)
314 1g60_A Adenine-specific methyl 96.3 0.0064 2.2E-07 53.4 6.3 57 125-188 198-254 (260)
315 2py6_A Methyltransferase FKBM; 96.2 0.0093 3.2E-07 56.0 7.2 59 141-199 224-289 (409)
316 3s2e_A Zinc-containing alcohol 96.0 0.011 3.8E-07 53.6 6.8 102 136-247 159-262 (340)
317 2zig_A TTHA0409, putative modi 96.0 0.0084 2.9E-07 53.7 5.7 88 192-281 20-134 (297)
318 4dkj_A Cytosine-specific methy 95.9 0.036 1.2E-06 52.0 9.8 149 145-298 11-238 (403)
319 2dph_A Formaldehyde dismutase; 95.9 0.017 5.8E-07 53.7 7.6 103 138-247 180-298 (398)
320 1f8f_A Benzyl alcohol dehydrog 95.8 0.031 1E-06 51.4 9.0 100 139-247 186-288 (371)
321 3two_A Mannitol dehydrogenase; 95.8 0.012 4.2E-07 53.6 6.2 96 136-248 169-265 (348)
322 3tos_A CALS11; methyltransfera 95.8 0.062 2.1E-06 47.2 10.4 104 144-248 70-217 (257)
323 3ps9_A TRNA 5-methylaminomethy 95.7 0.056 1.9E-06 53.8 10.8 124 143-280 66-238 (676)
324 1boo_A Protein (N-4 cytosine-s 95.5 0.025 8.5E-07 51.3 7.0 88 192-281 13-118 (323)
325 2vz8_A Fatty acid synthase; tr 95.5 0.0074 2.5E-07 68.7 3.9 100 142-248 1239-1348(2512)
326 1pl8_A Human sorbitol dehydrog 95.4 0.013 4.4E-07 53.7 4.7 102 137-247 165-272 (356)
327 1uuf_A YAHK, zinc-type alcohol 95.4 0.025 8.6E-07 52.1 6.6 98 138-247 189-287 (369)
328 3fwz_A Inner membrane protein 95.3 0.11 3.9E-06 40.6 9.4 97 144-248 7-105 (140)
329 3av4_A DNA (cytosine-5)-methyl 95.2 0.12 4.1E-06 55.2 11.8 147 144-298 851-1033(1330)
330 1g60_A Adenine-specific methyl 95.1 0.029 9.9E-07 49.1 5.9 76 194-281 5-97 (260)
331 4ej6_A Putative zinc-binding d 95.1 0.043 1.5E-06 50.5 7.3 102 137-247 176-283 (370)
332 1lss_A TRK system potassium up 95.0 0.089 3E-06 40.4 7.8 97 144-248 4-102 (140)
333 3c85_A Putative glutathione-re 95.0 0.11 3.7E-06 42.4 8.7 97 144-248 39-139 (183)
334 1e3j_A NADP(H)-dependent ketos 94.9 0.088 3E-06 47.9 8.7 100 138-247 163-270 (352)
335 3jv7_A ADH-A; dehydrogenase, n 94.8 0.045 1.5E-06 49.7 6.5 98 140-247 168-269 (345)
336 3m6i_A L-arabinitol 4-dehydrog 94.8 0.036 1.2E-06 50.7 5.7 105 136-248 172-283 (363)
337 1kol_A Formaldehyde dehydrogen 94.7 0.014 4.7E-07 54.3 2.7 102 139-247 181-299 (398)
338 2g1u_A Hypothetical protein TM 94.4 0.088 3E-06 41.9 6.7 100 142-248 17-118 (155)
339 3ic5_A Putative saccharopine d 94.4 0.14 4.6E-06 38.1 7.3 81 144-231 5-87 (118)
340 3uog_A Alcohol dehydrogenase; 94.4 0.082 2.8E-06 48.4 7.2 100 138-248 184-287 (363)
341 3fpc_A NADP-dependent alcohol 94.3 0.034 1.2E-06 50.7 4.4 102 137-247 160-265 (352)
342 2hwk_A Helicase NSP2; rossman 94.3 0.25 8.4E-06 43.8 9.6 90 198-299 195-298 (320)
343 2h6e_A ADH-4, D-arabinose 1-de 94.1 0.042 1.4E-06 49.9 4.5 97 140-247 168-268 (344)
344 2aef_A Calcium-gated potassium 93.9 0.24 8.1E-06 42.1 8.8 97 143-248 8-105 (234)
345 1piw_A Hypothetical zinc-type 93.9 0.045 1.5E-06 50.1 4.4 97 139-247 175-275 (360)
346 3abi_A Putative uncharacterize 93.8 0.15 5.2E-06 46.7 7.9 78 144-229 16-93 (365)
347 1rjw_A ADH-HT, alcohol dehydro 93.8 0.13 4.3E-06 46.6 7.1 98 138-247 159-260 (339)
348 3uko_A Alcohol dehydrogenase c 93.7 0.19 6.6E-06 46.1 8.4 101 138-247 188-294 (378)
349 1pqw_A Polyketide synthase; ro 93.7 0.13 4.3E-06 42.5 6.5 96 140-248 35-137 (198)
350 1eg2_A Modification methylase 93.5 0.1 3.6E-06 47.2 6.0 53 194-248 39-106 (319)
351 4eez_A Alcohol dehydrogenase 1 93.5 0.1 3.4E-06 47.2 5.9 102 137-247 157-262 (348)
352 2hcy_A Alcohol dehydrogenase 1 93.5 0.097 3.3E-06 47.5 5.8 100 136-247 162-268 (347)
353 1boo_A Protein (N-4 cytosine-s 93.4 0.083 2.8E-06 47.8 5.2 57 124-191 237-293 (323)
354 3ip1_A Alcohol dehydrogenase, 93.4 0.16 5.6E-06 47.1 7.4 103 140-247 210-317 (404)
355 1p0f_A NADP-dependent alcohol 93.3 0.17 5.9E-06 46.3 7.3 100 139-247 187-292 (373)
356 3gms_A Putative NADPH:quinone 93.2 0.14 4.7E-06 46.3 6.3 101 137-248 138-243 (340)
357 1cdo_A Alcohol dehydrogenase; 93.0 0.23 7.8E-06 45.5 7.6 98 139-247 188-293 (374)
358 2jhf_A Alcohol dehydrogenase E 92.9 0.2 6.8E-06 45.9 7.1 98 139-247 187-292 (374)
359 2cf5_A Atccad5, CAD, cinnamyl 92.9 0.099 3.4E-06 47.7 5.0 97 139-247 175-274 (357)
360 1e3i_A Alcohol dehydrogenase, 92.8 0.2 7E-06 45.9 7.0 98 139-247 191-296 (376)
361 1yqd_A Sinapyl alcohol dehydro 92.8 0.098 3.4E-06 48.0 4.8 97 139-247 182-281 (366)
362 3llv_A Exopolyphosphatase-rela 92.8 0.31 1.1E-05 37.7 7.1 96 144-248 6-103 (141)
363 2fzw_A Alcohol dehydrogenase c 92.8 0.18 6.2E-06 46.1 6.6 98 139-247 186-291 (373)
364 4b7c_A Probable oxidoreductase 92.8 0.23 7.9E-06 44.6 7.1 97 138-247 144-247 (336)
365 1jvb_A NAD(H)-dependent alcoho 92.7 0.17 5.6E-06 45.9 6.2 99 138-248 165-271 (347)
366 1v3u_A Leukotriene B4 12- hydr 92.7 0.28 9.6E-06 44.0 7.6 96 139-247 141-243 (333)
367 3l4b_C TRKA K+ channel protien 92.7 0.19 6.4E-06 42.3 6.0 95 146-247 2-98 (218)
368 3goh_A Alcohol dehydrogenase, 92.7 0.094 3.2E-06 46.8 4.3 93 136-247 135-228 (315)
369 1vj0_A Alcohol dehydrogenase, 92.6 0.14 4.8E-06 47.1 5.5 102 137-247 188-297 (380)
370 3nx4_A Putative oxidoreductase 92.4 0.11 3.7E-06 46.5 4.5 95 140-247 142-240 (324)
371 2d8a_A PH0655, probable L-thre 92.3 0.17 5.9E-06 45.8 5.6 99 137-247 162-266 (348)
372 1eg2_A Modification methylase 92.0 0.19 6.3E-06 45.5 5.4 57 123-186 226-285 (319)
373 4fs3_A Enoyl-[acyl-carrier-pro 91.9 0.89 3E-05 39.2 9.6 80 143-222 5-95 (256)
374 1id1_A Putative potassium chan 91.9 0.42 1.4E-05 37.7 6.9 99 145-248 4-105 (153)
375 1wma_A Carbonyl reductase [NAD 91.6 0.56 1.9E-05 40.1 7.9 78 144-222 4-91 (276)
376 4eye_A Probable oxidoreductase 91.5 0.075 2.6E-06 48.2 2.3 98 138-247 154-256 (342)
377 3pxx_A Carveol dehydrogenase; 91.5 0.91 3.1E-05 39.4 9.3 105 143-248 9-153 (287)
378 4dvj_A Putative zinc-dependent 91.4 0.17 5.8E-06 46.3 4.6 94 143-247 171-269 (363)
379 2j3h_A NADP-dependent oxidored 91.4 0.35 1.2E-05 43.5 6.6 96 139-247 151-254 (345)
380 2hmt_A YUAA protein; RCK, KTN, 91.2 0.43 1.5E-05 36.6 6.2 96 144-248 6-104 (144)
381 1iz0_A Quinone oxidoreductase; 91.1 0.15 5.3E-06 45.1 3.9 92 141-247 123-217 (302)
382 3jyn_A Quinone oxidoreductase; 91.1 0.22 7.4E-06 44.7 4.9 98 140-248 137-239 (325)
383 2c0c_A Zinc binding alcohol de 91.1 0.48 1.6E-05 43.2 7.3 98 140-248 160-261 (362)
384 2dq4_A L-threonine 3-dehydroge 91.0 0.24 8.4E-06 44.7 5.2 96 139-247 161-261 (343)
385 2b5w_A Glucose dehydrogenase; 90.8 0.29 9.9E-06 44.5 5.6 98 139-248 162-273 (357)
386 3oig_A Enoyl-[acyl-carrier-pro 90.8 1.8 6.1E-05 37.1 10.4 106 143-248 6-147 (266)
387 3qwb_A Probable quinone oxidor 90.6 0.32 1.1E-05 43.7 5.6 97 140-247 145-246 (334)
388 1rjd_A PPM1P, carboxy methyl t 90.5 9.1 0.00031 34.5 15.3 104 142-248 96-232 (334)
389 1xa0_A Putative NADPH dependen 90.3 0.32 1.1E-05 43.5 5.3 95 140-247 145-245 (328)
390 1lnq_A MTHK channels, potassiu 90.3 0.92 3.2E-05 40.7 8.4 96 144-248 115-211 (336)
391 3iht_A S-adenosyl-L-methionine 90.3 0.19 6.5E-06 40.5 3.2 99 144-248 41-147 (174)
392 3k31_A Enoyl-(acyl-carrier-pro 90.2 1.2 4.2E-05 39.1 9.0 80 143-222 29-117 (296)
393 3tjr_A Short chain dehydrogena 90.2 0.63 2.2E-05 41.2 7.1 79 143-222 30-117 (301)
394 4eso_A Putative oxidoreductase 90.2 0.82 2.8E-05 39.3 7.6 103 143-248 7-138 (255)
395 3ijr_A Oxidoreductase, short c 90.2 1.2 4.2E-05 39.1 8.9 104 143-248 46-182 (291)
396 1qor_A Quinone oxidoreductase; 90.1 0.35 1.2E-05 43.3 5.3 96 139-247 136-238 (327)
397 1zkd_A DUF185; NESG, RPR58, st 90.1 0.67 2.3E-05 43.0 7.3 53 128-180 65-123 (387)
398 3l9w_A Glutathione-regulated p 90.0 0.47 1.6E-05 44.4 6.2 97 144-248 4-102 (413)
399 3r6d_A NAD-dependent epimerase 89.9 0.55 1.9E-05 39.1 6.1 75 146-224 7-84 (221)
400 2eih_A Alcohol dehydrogenase; 89.8 0.65 2.2E-05 41.8 6.9 95 140-247 163-264 (343)
401 1wly_A CAAR, 2-haloacrylate re 89.5 0.6 2E-05 41.9 6.4 96 139-247 141-243 (333)
402 4dup_A Quinone oxidoreductase; 89.4 0.61 2.1E-05 42.3 6.5 98 139-247 163-264 (353)
403 4a2c_A Galactitol-1-phosphate 89.4 1.9 6.7E-05 38.5 9.8 101 138-247 155-259 (346)
404 3gaz_A Alcohol dehydrogenase s 89.1 0.25 8.4E-06 44.8 3.6 97 137-247 144-245 (343)
405 3o38_A Short chain dehydrogena 89.1 1.5 5.3E-05 37.5 8.6 79 143-222 21-110 (266)
406 1tt7_A YHFP; alcohol dehydroge 89.0 0.3 1E-05 43.8 4.0 96 140-247 146-246 (330)
407 3edm_A Short chain dehydrogena 89.0 1.3 4.4E-05 38.1 7.9 79 143-222 7-95 (259)
408 3grk_A Enoyl-(acyl-carrier-pro 89.0 1.8 6.1E-05 38.1 9.0 80 143-222 30-118 (293)
409 3e48_A Putative nucleoside-dip 88.9 1.5 5.1E-05 37.9 8.4 71 146-222 2-74 (289)
410 3ek2_A Enoyl-(acyl-carrier-pro 88.7 1.6 5.4E-05 37.4 8.4 82 141-222 11-101 (271)
411 1yb5_A Quinone oxidoreductase; 88.7 0.72 2.5E-05 41.8 6.4 96 139-247 166-268 (351)
412 3ruf_A WBGU; rossmann fold, UD 88.6 1.2 4.2E-05 39.7 7.8 78 144-222 25-109 (351)
413 4ina_A Saccharopine dehydrogen 88.6 0.86 2.9E-05 42.4 7.0 85 145-231 2-94 (405)
414 3v2g_A 3-oxoacyl-[acyl-carrier 88.3 1.7 5.9E-05 37.7 8.4 105 143-248 30-165 (271)
415 3fbg_A Putative arginate lyase 88.1 0.24 8.2E-06 44.9 2.7 93 143-247 150-247 (346)
416 1ja9_A 4HNR, 1,3,6,8-tetrahydr 88.0 0.96 3.3E-05 38.8 6.5 78 144-222 21-108 (274)
417 3ius_A Uncharacterized conserv 87.8 4.9 0.00017 34.4 11.1 66 145-222 6-72 (286)
418 2zb4_A Prostaglandin reductase 87.6 0.69 2.4E-05 41.9 5.5 97 139-247 154-259 (357)
419 4dcm_A Ribosomal RNA large sub 87.6 1.9 6.4E-05 39.6 8.5 94 143-248 38-136 (375)
420 2j8z_A Quinone oxidoreductase; 87.3 0.37 1.3E-05 43.8 3.5 97 139-248 158-261 (354)
421 4fgs_A Probable dehydrogenase 87.3 2.8 9.6E-05 36.8 9.1 102 143-248 28-159 (273)
422 2eez_A Alanine dehydrogenase; 87.2 0.33 1.1E-05 44.6 3.1 98 143-247 165-265 (369)
423 3is3_A 17BETA-hydroxysteroid d 87.1 1.7 5.9E-05 37.5 7.6 104 143-248 17-152 (270)
424 3sju_A Keto reductase; short-c 86.9 0.9 3.1E-05 39.6 5.7 79 143-222 23-110 (279)
425 3pgx_A Carveol dehydrogenase; 86.9 1.7 5.7E-05 37.8 7.4 79 143-222 14-114 (280)
426 3ksu_A 3-oxoacyl-acyl carrier 86.8 1.4 4.7E-05 38.0 6.8 79 143-222 10-100 (262)
427 3dqp_A Oxidoreductase YLBE; al 86.8 0.64 2.2E-05 38.6 4.5 70 145-222 1-72 (219)
428 3r3s_A Oxidoreductase; structu 86.7 1.8 6.2E-05 38.0 7.6 104 143-248 48-185 (294)
429 3sx2_A Putative 3-ketoacyl-(ac 86.7 1.3 4.4E-05 38.3 6.6 79 143-222 12-111 (278)
430 2gn4_A FLAA1 protein, UDP-GLCN 86.6 0.92 3.2E-05 40.9 5.8 78 143-222 20-100 (344)
431 3krt_A Crotonyl COA reductase; 86.6 1 3.5E-05 42.4 6.2 98 139-247 224-343 (456)
432 3ioy_A Short-chain dehydrogena 86.4 1.8 6.3E-05 38.5 7.6 79 143-222 7-96 (319)
433 2cdc_A Glucose dehydrogenase g 86.3 0.59 2E-05 42.6 4.3 91 144-247 181-277 (366)
434 2vn8_A Reticulon-4-interacting 86.3 1.9 6.4E-05 39.3 7.7 97 141-247 181-279 (375)
435 4e6p_A Probable sorbitol dehyd 86.2 1.8 6.1E-05 37.1 7.2 77 143-222 7-91 (259)
436 3qvo_A NMRA family protein; st 85.9 0.92 3.1E-05 38.3 5.1 75 145-225 24-100 (236)
437 4egf_A L-xylulose reductase; s 85.9 1.7 5.7E-05 37.6 6.8 79 143-222 19-107 (266)
438 4f6c_A AUSA reductase domain p 85.9 5 0.00017 36.9 10.6 78 143-222 68-159 (427)
439 3qiv_A Short-chain dehydrogena 85.9 0.93 3.2E-05 38.6 5.2 79 143-222 8-95 (253)
440 3tqh_A Quinone oxidoreductase; 85.9 1.2 4E-05 39.7 6.0 97 137-247 146-244 (321)
441 3oec_A Carveol dehydrogenase ( 85.3 2.3 7.8E-05 37.8 7.6 79 143-222 45-144 (317)
442 1sny_A Sniffer CG10964-PA; alp 85.2 0.87 3E-05 39.0 4.6 79 143-222 20-111 (267)
443 3rkr_A Short chain oxidoreduct 85.1 0.83 2.8E-05 39.3 4.5 79 143-222 28-115 (262)
444 3ucx_A Short chain dehydrogena 85.0 1.7 5.8E-05 37.4 6.5 78 143-221 10-96 (264)
445 2yut_A Putative short-chain ox 85.0 1.4 4.7E-05 36.0 5.6 71 146-222 2-75 (207)
446 3ggo_A Prephenate dehydrogenas 84.7 2.8 9.7E-05 37.4 7.9 88 145-244 34-124 (314)
447 3tfo_A Putative 3-oxoacyl-(acy 84.4 2 6.9E-05 37.2 6.7 78 144-222 4-90 (264)
448 3awd_A GOX2181, putative polyo 84.1 1.6 5.5E-05 37.1 5.8 79 143-222 12-99 (260)
449 1fmc_A 7 alpha-hydroxysteroid 84.0 1.5 5.1E-05 37.1 5.6 79 143-222 10-97 (255)
450 3h7a_A Short chain dehydrogena 83.9 1.4 4.6E-05 37.8 5.3 79 143-222 6-92 (252)
451 3ftp_A 3-oxoacyl-[acyl-carrier 83.8 1.7 5.9E-05 37.6 6.0 79 143-222 27-114 (270)
452 3u5t_A 3-oxoacyl-[acyl-carrier 83.5 1.9 6.6E-05 37.2 6.2 79 143-222 26-114 (267)
453 1ae1_A Tropinone reductase-I; 83.4 2.3 7.7E-05 36.8 6.6 79 143-222 20-108 (273)
454 3gvc_A Oxidoreductase, probabl 83.4 2.6 8.8E-05 36.7 6.9 77 143-222 28-112 (277)
455 3tsc_A Putative oxidoreductase 83.2 2.6 9E-05 36.4 6.9 79 143-222 10-110 (277)
456 3ged_A Short-chain dehydrogena 83.2 4 0.00014 35.2 8.0 74 145-222 3-84 (247)
457 3dii_A Short-chain dehydrogena 83.1 3.2 0.00011 35.2 7.3 74 145-222 3-84 (247)
458 3lf2_A Short chain oxidoreduct 83.0 3.7 0.00013 35.2 7.8 79 143-222 7-96 (265)
459 1gee_A Glucose 1-dehydrogenase 82.9 1.8 6.3E-05 36.8 5.7 78 144-222 7-94 (261)
460 3trk_A Nonstructural polyprote 82.9 0.86 2.9E-05 40.0 3.4 38 211-248 209-259 (324)
461 2ae2_A Protein (tropinone redu 82.8 2.1 7.2E-05 36.6 6.1 79 143-222 8-96 (260)
462 3l77_A Short-chain alcohol deh 82.7 2.5 8.6E-05 35.4 6.4 78 144-222 2-89 (235)
463 2wyu_A Enoyl-[acyl carrier pro 82.7 4.3 0.00015 34.6 8.1 79 143-222 7-95 (261)
464 3gqv_A Enoyl reductase; medium 82.6 3.5 0.00012 37.5 7.8 95 142-247 163-262 (371)
465 4imr_A 3-oxoacyl-(acyl-carrier 82.6 2.1 7.1E-05 37.2 6.0 79 143-222 32-118 (275)
466 4dqx_A Probable oxidoreductase 82.3 4.5 0.00015 35.1 8.1 77 143-222 26-110 (277)
467 3f9i_A 3-oxoacyl-[acyl-carrier 82.2 2.6 8.8E-05 35.6 6.3 79 141-222 11-93 (249)
468 4fn4_A Short chain dehydrogena 82.1 2.6 8.8E-05 36.6 6.3 79 143-222 6-93 (254)
469 1yb1_A 17-beta-hydroxysteroid 82.1 1.9 6.6E-05 37.2 5.6 79 143-222 30-117 (272)
470 2pd4_A Enoyl-[acyl-carrier-pro 82.0 5.3 0.00018 34.3 8.5 79 143-222 5-93 (275)
471 3nzo_A UDP-N-acetylglucosamine 82.0 1.5 5E-05 40.5 5.0 78 144-222 35-121 (399)
472 2bgk_A Rhizome secoisolaricire 81.8 1.9 6.7E-05 36.9 5.5 79 143-222 15-101 (278)
473 3o26_A Salutaridine reductase; 81.6 1.9 6.5E-05 37.5 5.4 79 143-222 11-100 (311)
474 3h2s_A Putative NADH-flavin re 81.6 7.5 0.00026 31.8 9.0 71 145-223 1-72 (224)
475 4a0s_A Octenoyl-COA reductase/ 81.6 1.8 6.1E-05 40.5 5.5 98 139-247 216-335 (447)
476 3ew7_A LMO0794 protein; Q8Y8U8 81.5 4.5 0.00015 33.0 7.5 70 145-223 1-71 (221)
477 3e9n_A Putative short-chain de 81.5 5.2 0.00018 33.6 8.1 74 144-222 5-84 (245)
478 3r1i_A Short-chain type dehydr 81.2 1.6 5.4E-05 38.1 4.7 79 143-222 31-118 (276)
479 3l6e_A Oxidoreductase, short-c 81.1 4.8 0.00016 33.9 7.7 76 144-222 3-86 (235)
480 4ezb_A Uncharacterized conserv 80.8 9.9 0.00034 33.7 10.0 89 145-247 25-119 (317)
481 3f1l_A Uncharacterized oxidore 80.7 4.5 0.00016 34.3 7.4 79 143-222 11-101 (252)
482 1zsy_A Mitochondrial 2-enoyl t 80.7 3.2 0.00011 37.4 6.8 100 140-247 164-269 (357)
483 4g81_D Putative hexonate dehyd 80.5 4.6 0.00016 35.0 7.4 79 143-222 8-95 (255)
484 1g0o_A Trihydroxynaphthalene r 80.4 4.8 0.00017 34.8 7.6 79 143-222 28-116 (283)
485 3ai3_A NADPH-sorbose reductase 80.4 2.6 8.8E-05 36.1 5.7 78 144-222 7-94 (263)
486 2uyo_A Hypothetical protein ML 80.4 7.4 0.00025 34.7 8.9 100 145-248 104-218 (310)
487 2ew2_A 2-dehydropantoate 2-red 80.4 7.3 0.00025 33.8 8.9 94 145-247 4-106 (316)
488 4da9_A Short-chain dehydrogena 80.3 3.4 0.00012 35.9 6.6 79 143-222 28-116 (280)
489 3gaf_A 7-alpha-hydroxysteroid 80.3 1.7 5.9E-05 37.2 4.6 79 143-222 11-98 (256)
490 3v8b_A Putative dehydrogenase, 80.1 2.6 9E-05 36.7 5.8 79 143-222 27-114 (283)
491 3uve_A Carveol dehydrogenase ( 80.0 2.8 9.5E-05 36.4 5.9 79 143-222 10-113 (286)
492 3oid_A Enoyl-[acyl-carrier-pro 80.0 3.7 0.00013 35.1 6.6 79 143-222 3-91 (258)
493 4f3n_A Uncharacterized ACR, CO 80.0 1 3.5E-05 42.4 3.1 37 144-180 138-178 (432)
494 1zk4_A R-specific alcohol dehy 79.8 1.6 5.4E-05 36.9 4.1 78 144-222 6-91 (251)
495 1zem_A Xylitol dehydrogenase; 79.8 2.8 9.5E-05 35.9 5.8 79 143-222 6-93 (262)
496 2c07_A 3-oxoacyl-(acyl-carrier 79.7 4.7 0.00016 34.9 7.3 78 144-222 44-130 (285)
497 2rhc_B Actinorhodin polyketide 79.7 2.6 8.9E-05 36.5 5.6 79 143-222 21-108 (277)
498 1geg_A Acetoin reductase; SDR 79.7 2.6 9E-05 35.9 5.6 77 145-222 3-88 (256)
499 1y1p_A ARII, aldehyde reductas 79.7 6.1 0.00021 34.6 8.2 80 142-222 9-92 (342)
500 1xq6_A Unknown protein; struct 79.6 1.6 5.4E-05 36.6 4.1 72 144-222 4-78 (253)
No 1
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=100.00 E-value=2e-48 Score=343.14 Aligned_cols=227 Identities=47% Similarity=0.782 Sum_probs=211.3
Q ss_pred ceeeccc-ccCceEEEeCCcce--eeeccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCC
Q 021911 68 KVVVEPH-RHEGVFIAKGKEDA--LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPG 144 (305)
Q Consensus 68 ~~~~~~~-~~~gv~~~~~~~~~--l~t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g 144 (305)
-|.|+|| +++|||+.+++++. |+|+|++|++++|+|+++.++.. |||.|||++|+|++.++..|++++++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~t~n~~~g~~vyge~~~~~~~~-----e~r~w~p~rsklaa~i~~gl~~l~ikpG 78 (233)
T 4df3_A 4 VVSVSRHDRWRGVYVVELEDGSLRIATKNLVPGQRVYGERIFRYNGE-----EYREWNAYRSKLAAALLKGLIELPVKEG 78 (233)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEEECSSTTCCSSSCCEEEETTE-----EEEECCTTTCHHHHHHHTTCSCCCCCTT
T ss_pred eeEEeEecccCCEEEEEccCCceeEEEecCCCCCcccCceEEEcCCc-----eeeeECCCchHHHHHHHhchhhcCCCCC
Confidence 4789999 99999999998876 59999999999999999888764 9999999999999999999999999999
Q ss_pred CEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCCh
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP 224 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~ 224 (305)
++|||+|||+|+++.++|+.++++++|||||+|+++++++.+.+++++||.++..|+..+..+..+..+||+|+++++++
T Consensus 79 ~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~ 158 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQP 158 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCT
T ss_pred CEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccCC
Confidence 99999999999999999999999999999999999999998888888999999999999887777788999999999999
Q ss_pred hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEcC
Q 021911 225 DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRM 299 (305)
Q Consensus 225 ~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~~ 299 (305)
++.+.+..+++++|||||+|++++++.++++..++..+|.+++++|++.||+++++++++||+++|++|+++|++
T Consensus 159 ~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~~rR 233 (233)
T 4df3_A 159 EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAVMRR 233 (233)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEECC--
T ss_pred hhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEEEeC
Confidence 988777779999999999999999989988888888899999999999999999999999999999999999875
No 2
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=100.00 E-value=3.6e-44 Score=316.50 Aligned_cols=225 Identities=44% Similarity=0.752 Sum_probs=201.5
Q ss_pred eeecccccCceEEEe--CCcceeeeccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCE
Q 021911 69 VVVEPHRHEGVFIAK--GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGAR 146 (305)
Q Consensus 69 ~~~~~~~~~gv~~~~--~~~~~l~t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~ 146 (305)
+.|++|+++|||+.+ ++.+.|+|+|++|++++|.|..+.++.. +|+.|+|++|++++.++..|+.+.++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~pg~~vy~e~~~~~~~~-----~yr~w~~~~skla~~ll~~l~~~~l~~g~~ 79 (232)
T 3id6_C 5 ITVKQTNMENIYECEFNDGSFRLCTRNLVPNFNVYGERLIKYEGV-----EYREWNAFRSKLAGAILKGLKTNPIRKGTK 79 (232)
T ss_dssp CEEEECSSTTEEEEECTTSCEEEEEECSSTTCCSSSCCEEEETTE-----EEEECCTTTCHHHHHHHTTCSCCSCCTTCE
T ss_pred EEEEeeccCcEEEEEccCCcceEEEecccCCCCcccceeeeecCc-----chhhhchHHHHHHHHHHhhhhhcCCCCCCE
Confidence 347799999999998 6778899999999999999999998764 899999999999999999998888999999
Q ss_pred EEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCChhH
Q 021911 147 VLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226 (305)
Q Consensus 147 VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~~~ 226 (305)
|||+|||+|.++.++|+.+++.++|+|+|+|+.+++.+++.+++++||.+++.|++.+..+..+..+||+|++|++.++|
T Consensus 80 VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~~~~ 159 (232)
T 3id6_C 80 VLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQ 159 (232)
T ss_dssp EEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCCTTH
T ss_pred EEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCChhH
Confidence 99999999999999999998899999999999988888888888899999999999876554456799999999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEc
Q 021911 227 ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 227 ~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~ 298 (305)
.+++..++.++|||||+|++++++.|++.+.++++++..++..|++++|+++++++++||+++|++|+++|+
T Consensus 160 ~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 160 TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEeC
Confidence 999886777799999999999999999999999999999999999999999999999999999999999986
No 3
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=259.95 Aligned_cols=233 Identities=79% Similarity=1.225 Sum_probs=194.8
Q ss_pred CCceeecccccCceEEEeCCcceeeeccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCC
Q 021911 66 GSKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGA 145 (305)
Q Consensus 66 g~~~~~~~~~~~gv~~~~~~~~~l~t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~ 145 (305)
|+|++||||+++|+|+..++.+.|.|.|+.++..+|.+..+.++. ...+++|+.|+|+.+++...++..|+.+.++++.
T Consensus 1 ~~~~~~~~~~~~g~~~~~~~~~~~~~~n~~~~~~vy~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 79 (233)
T 2ipx_A 1 GKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISE-GDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGA 79 (233)
T ss_dssp ----CCEECSSTTEEECC-----CEEECSSTTCCSSSCCEEEEC-----CEEEEECCTTTCHHHHHHHTTCSCCCCCTTC
T ss_pred CCceEEeecccCceEEEecCCceEEEEecCCCcccccceEEEecC-CCCceEEEEecccchhHHHHHHhHHheecCCCCC
Confidence 478999999999999999988899999999999999999998872 2256899999999999999998878877888999
Q ss_pred EEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCChh
Q 021911 146 RVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPD 225 (305)
Q Consensus 146 ~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~~ 225 (305)
+|||+|||+|.++.++++.+++.++|++||+|+.+++.+++.++.++|+++++.|+.+.........+||+|+++++.++
T Consensus 80 ~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~~~~ 159 (233)
T 2ipx_A 80 KVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPD 159 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCCCTT
T ss_pred EEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCCCcc
Confidence 99999999999999999998767799999999988889999998888999999999875433334579999999999888
Q ss_pred HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEcC
Q 021911 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRM 299 (305)
Q Consensus 226 ~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~~ 299 (305)
+.+.+..++.++|||||+|+++++..+.+.......++..+++.|+++||++++...++||+.+|++++++|++
T Consensus 160 ~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~~~~ 233 (233)
T 2ipx_A 160 QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRP 233 (233)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEEEEeCC
Confidence 87776658999999999999988665556666666677777888889999999999999999999999999964
No 4
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=100.00 E-value=1.7e-32 Score=238.58 Aligned_cols=208 Identities=44% Similarity=0.702 Sum_probs=181.9
Q ss_pred ccccCceEEEeCCcceeeeccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEec
Q 021911 73 PHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGA 152 (305)
Q Consensus 73 ~~~~~gv~~~~~~~~~l~t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~ 152 (305)
||+++|+|+.+ +.|+|+|+.+ ++|+++.+ .+|+.|+|+++++.+.++..++ +.++++.+|||+||
T Consensus 2 ~~~~~~~~~~~---~~~~t~~~~~--~~Y~~~~~---------~~y~~~~~~~~~l~~~~~~~l~-~~~~~g~~VLDlGc 66 (210)
T 1nt2_A 2 KELMRNVYLLD---DTLVTKSKYG--SHYGEKVF---------DGYREWVPWRSKLAAMILKGHR-LKLRGDERVLYLGA 66 (210)
T ss_dssp CEEETTEEEET---TEEEEECSCC--CSSSCCEE---------TTEEECCGGGCHHHHHHHTSCC-CCCCSSCEEEEETC
T ss_pred CcccCcEEEEe---eeEeeccCCc--cccchhhh---------hhhhhcChhHHHHHHHHHhhcc-cCCCCCCEEEEECC
Confidence 79999999998 8899999987 89999876 2799999999999999887776 67788999999999
Q ss_pred CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCChhHHHHHHH
Q 021911 153 ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILAL 232 (305)
Q Consensus 153 G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~ 232 (305)
|+|.++.++++.++ .++|++||+|+.+++.+++.++.+.|+.+++.|+..+..+....++||+|+++++.+++.+.+..
T Consensus 67 GtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~l~ 145 (210)
T 1nt2_A 67 ASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKA 145 (210)
T ss_dssp TTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCCSTTHHHHHHH
T ss_pred cCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEeccChhHHHHHHH
Confidence 99999999999875 67999999999888888888887789999999998763322234799999999988888877445
Q ss_pred HHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEE
Q 021911 233 NASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 233 ~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~ 297 (305)
+++++|||||+|+++++..|++...+++.++.++++.|+++ |++.+..+++||+++|+++++++
T Consensus 146 ~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 146 NAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp HHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 99999999999999988777777777888888888889888 99999999999999999999875
No 5
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=100.00 E-value=2.8e-31 Score=233.39 Aligned_cols=221 Identities=44% Similarity=0.740 Sum_probs=188.9
Q ss_pred cccCceEEEeCCcc--eeeeccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEe
Q 021911 74 HRHEGVFIAKGKED--ALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLG 151 (305)
Q Consensus 74 ~~~~gv~~~~~~~~--~l~t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG 151 (305)
|+++|+|+.+++++ .|+|.|..++..+|++..+.+... +|+.|||+++++.+.++..++.+.+.++.+|||+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyge~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~VLDlG 82 (230)
T 1fbn_A 8 EIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDE-----EYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILYLG 82 (230)
T ss_dssp EETTTEEEEECSSSCCCEEEECSSTTCCSSSCCEEEETTE-----EEEECCTTTCHHHHHHHTTCCCCCCCTTCEEEEES
T ss_pred cccCcEEEEecCCCceeeeEEccCCCCCccCceEEeeccc-----eeeeeCcchhHHHHHHHhcccccCCCCCCEEEEEc
Confidence 99999999998877 578999999999999999988764 89999999999998886667766778899999999
Q ss_pred cCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCChhHHHHHH
Q 021911 152 AASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILA 231 (305)
Q Consensus 152 ~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~~~~~~l~ 231 (305)
||+|.++.++++.++ .++|++||+|+.+++.+.+.++..+|+.+++.|+..+..+.....+||+|+++++.+.+...+.
T Consensus 83 cG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~l 161 (230)
T 1fbn_A 83 ASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILI 161 (230)
T ss_dssp CCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEECCCSTTHHHHHH
T ss_pred ccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEecCChhHHHHHH
Confidence 999999999999975 6799999999988877777777668999999999875432222368999999998888877755
Q ss_pred HHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEcCC
Q 021911 232 LNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMP 300 (305)
Q Consensus 232 ~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~~~ 300 (305)
.++.++|||||+|+++.+..|.+...+...++.+++..|++.||++++..++.|++++|++++++|+++
T Consensus 162 ~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k~~~ 230 (230)
T 1fbn_A 162 KNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIWEGK 230 (230)
T ss_dssp HHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEEEECTTTSTTEEEEEEEECCC
T ss_pred HHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCCEEEEEEccCCCccceEEEEEEeCCC
Confidence 599999999999999876666666666666777778888889999999999999999999999999764
No 6
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.97 E-value=1.4e-29 Score=221.61 Aligned_cols=224 Identities=49% Similarity=0.770 Sum_probs=190.0
Q ss_pred eeecccccCceEEEeCCcc--eeeeccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCE
Q 021911 69 VVVEPHRHEGVFIAKGKED--ALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGAR 146 (305)
Q Consensus 69 ~~~~~~~~~gv~~~~~~~~--~l~t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~ 146 (305)
|.|++|++.++|+.+.+.. .+++.|+.++..+|++..+.... .+|+.|+|..+++.+.++..++.+.+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~p~~~~~~~~i~~~l~~~~~~~~~~ 76 (227)
T 1g8a_A 2 VEVKKHKFPGVYTVIDDDGSERIATKNLVPGQRVYGERVIKWEG-----EEYRIWNPNRSKLGAAIMNGLKNFPIKPGKS 76 (227)
T ss_dssp CEEEECSSTTEEEEECSSSCSEEEEECSSTTCCCTTCCEEEETT-----EEEEECCTTTCHHHHHHHTTCCCCCCCTTCE
T ss_pred ceeeeeccCceEEEecCCchhheeeecCCCCccccCceEEEecC-----eEEEEeCCCchhHHHHHHhhHHhcCCCCCCE
Confidence 4578899999999998664 67889998999999998776654 4899999999999999987777767888999
Q ss_pred EEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCChhH
Q 021911 147 VLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226 (305)
Q Consensus 147 VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~~~ 226 (305)
|||+|||+|.++..+++.+++.++|+++|+|+.+++.+.+.++..+|+.+++.|+.+.........+||+|+++++.+++
T Consensus 77 vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~~~~ 156 (227)
T 1g8a_A 77 VLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQ 156 (227)
T ss_dssp EEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCSTTH
T ss_pred EEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCCCHhH
Confidence 99999999999999999987668999999999888888888877789999999998754322234689999999998888
Q ss_pred HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEc
Q 021911 227 ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 227 ~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~ 298 (305)
.+.+..++.++|||||+|+++++..+.+...+...++.+++..+.+. |++++..++.||+.+|++++++|+
T Consensus 157 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-f~~~~~~~~~~~~~~~~~~~~~~~ 227 (227)
T 1g8a_A 157 AKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY-FEVIERLNLEPYEKDHALFVVRKT 227 (227)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTTTSSSEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh-ceeeeEeccCcccCCCEEEEEEeC
Confidence 87744499999999999999976666666666667777888888777 999999999999999999999874
No 7
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.84 E-value=1e-20 Score=181.63 Aligned_cols=156 Identities=19% Similarity=0.185 Sum_probs=125.4
Q ss_pred CCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEe
Q 021911 96 AGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVE 175 (305)
Q Consensus 96 ~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD 175 (305)
.....|.++.+++||+ .|++++.++ .++++.+|||+|||+|.++.++|+.+.+.+.|+|+|
T Consensus 77 ~~~~~~~~G~~~vQd~-------------ss~l~~~~L------~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvD 137 (456)
T 3m4x_A 77 GKSFLHQAGYEYSQEP-------------SAMIVGTAA------AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNE 137 (456)
T ss_dssp TTSHHHHTTSCEECCT-------------TTHHHHHHH------CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEC
T ss_pred CCChHHhCCcEEEECH-------------HHHHHHHHc------CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEe
Confidence 4567899999999998 899999988 578999999999999999999999987778999999
Q ss_pred CChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEeCCC-------------------------hhHHH
Q 021911 176 FSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ-------------------------PDQAR 228 (305)
Q Consensus 176 ~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~-------------------------~~~~~ 228 (305)
+|+.+++.+.++++.. .||.+++.|+...... ...+||+|++|+|| ..|.+
T Consensus 138 is~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~--~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~ 215 (456)
T 3m4x_A 138 IFPKRAKILSENIERWGVSNAIVTNHAPAELVPH--FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQE 215 (456)
T ss_dssp SSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH--HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh--ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHH
Confidence 9998877777766553 6899999998776432 24789999999995 13557
Q ss_pred HHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeE
Q 021911 229 ILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFE 279 (305)
Q Consensus 229 ~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e 279 (305)
+|. ++.++|||||+|+|+| |++...+++.++ ...+++.+|+++.
T Consensus 216 iL~-~a~~~LkpGG~LvYsT--Cs~~~eEne~vv----~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 216 ILS-SAIKMLKNKGQLIYST--CTFAPEENEEII----SWLVENYPVTIEE 259 (456)
T ss_dssp HHH-HHHHTEEEEEEEEEEE--SCCCGGGTHHHH----HHHHHHSSEEEEC
T ss_pred HHH-HHHHhcCCCcEEEEEE--eecccccCHHHH----HHHHHhCCCEEEe
Confidence 777 9999999999999999 777776666554 2233445565543
No 8
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.83 E-value=7e-20 Score=165.06 Aligned_cols=146 Identities=22% Similarity=0.231 Sum_probs=118.8
Q ss_pred cCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEE
Q 021911 95 VAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAV 174 (305)
Q Consensus 95 ~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~av 174 (305)
+...+.|.++.+.+|+. .+++++.++ .+.++.+|||+|||+|.++.++++.+...++|+++
T Consensus 54 ~~~~~~~~~G~~~~qd~-------------~s~l~~~~l------~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~av 114 (274)
T 3ajd_A 54 IGSTPEYLFGYYMPQSI-------------SSMIPPIVL------NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAV 114 (274)
T ss_dssp TTSSHHHHTTSEEECCS-------------GGGHHHHHH------CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEE
T ss_pred cccChhhhCCeEEEeCH-------------HHHHHHHHh------CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEE
Confidence 45667899999999998 889988887 57889999999999999999999987555899999
Q ss_pred eCChHHHHHHHHHHHcC--CCeEEEEccCCCCccc-ccCCCcEeEEEEeCCC---------------------hhHHHHH
Q 021911 175 EFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKY-RMLVGMVDVIFSDVAQ---------------------PDQARIL 230 (305)
Q Consensus 175 D~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~-~~~~~~fD~V~~d~~~---------------------~~~~~~l 230 (305)
|+|+.+++.+.++++.. +|+.+++.|+...... .....+||+|++|+|| ..|.+++
T Consensus 115 D~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l 194 (274)
T 3ajd_A 115 EISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELI 194 (274)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHH
Confidence 99998777776666554 5899999998765431 0014689999999886 3467788
Q ss_pred HHHHhccCCCCcEEEEEEcccccCCCCchhhh
Q 021911 231 ALNASYFLKAGGHFVISIKANCIDSTVPAEAV 262 (305)
Q Consensus 231 ~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v 262 (305)
. ++.++|||||+|+|+| |++...+++..+
T Consensus 195 ~-~~~~~LkpgG~lv~st--cs~~~~ene~~v 223 (274)
T 3ajd_A 195 D-IGIDLLKKDGELVYST--CSMEVEENEEVI 223 (274)
T ss_dssp H-HHHHHEEEEEEEEEEE--SCCCTTSSHHHH
T ss_pred H-HHHHhCCCCCEEEEEE--CCCChHHhHHHH
Confidence 7 9999999999999999 777777765544
No 9
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.82 E-value=7e-20 Score=168.39 Aligned_cols=156 Identities=23% Similarity=0.249 Sum_probs=123.2
Q ss_pred cCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEE
Q 021911 95 VAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAV 174 (305)
Q Consensus 95 ~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~av 174 (305)
+.....|.++.+.+||. .|++++.++ .++++.+|||+|||+|.++.++++.+.+.++|+++
T Consensus 89 ~~~~~~~~~G~~~~qd~-------------~s~l~~~~l------~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~av 149 (315)
T 1ixk_A 89 ITSTPEFLTGLIYIQEA-------------SSMYPPVAL------DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAF 149 (315)
T ss_dssp GGGSHHHHTTSEEECCH-------------HHHHHHHHH------CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEE
T ss_pred cccChhHhcceEEEeCH-------------HHHHHHHHh------CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 45667899999999998 889988887 57889999999999999999999988667899999
Q ss_pred eCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh-------------------------hHH
Q 021911 175 EFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP-------------------------DQA 227 (305)
Q Consensus 175 D~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~-------------------------~~~ 227 (305)
|+|+.+++.+.++++.. +||++++.|+..... ...+||+|++|+||. .|.
T Consensus 150 D~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~---~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~ 226 (315)
T 1ixk_A 150 DVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE---LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQM 226 (315)
T ss_dssp CSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG---GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc---ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHH
Confidence 99997777766666543 589999999987653 246899999998852 146
Q ss_pred HHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeE
Q 021911 228 RILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFE 279 (305)
Q Consensus 228 ~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e 279 (305)
+++. ++.++|||||+|+|+| |++...+++..+ . ..+++.+|++++
T Consensus 227 ~~L~-~~~~~LkpGG~lv~st--cs~~~~Ene~~v-~---~~l~~~~~~~~~ 271 (315)
T 1ixk_A 227 RLLE-KGLEVLKPGGILVYST--CSLEPEENEFVI-Q---WALDNFDVELLP 271 (315)
T ss_dssp HHHH-HHHHHEEEEEEEEEEE--SCCCGGGTHHHH-H---HHHHHSSEEEEC
T ss_pred HHHH-HHHHhCCCCCEEEEEe--CCCChHHhHHHH-H---HHHhcCCCEEec
Confidence 7777 9999999999999999 666666655443 1 223456666543
No 10
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.82 E-value=5e-20 Score=177.08 Aligned_cols=143 Identities=23% Similarity=0.272 Sum_probs=118.5
Q ss_pred cCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEE
Q 021911 95 VAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAV 174 (305)
Q Consensus 95 ~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~av 174 (305)
+.....|.++.+.+||+ .|++++.++ .++++.+|||+|||+|.++.++|+.+.+.+.|+|+
T Consensus 72 ~~~~~~~~~G~~~vQd~-------------ss~l~a~~L------~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~Av 132 (464)
T 3m6w_A 72 PGPHPFFYAGLYYIQEP-------------SAQAVGVLL------DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLAN 132 (464)
T ss_dssp CSSSHHHHTTSEEECCT-------------TTHHHHHHH------CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEE
T ss_pred cccChHHhCCeEEEECH-------------HHHHHHHhc------CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEE
Confidence 45567899999999998 899999888 57899999999999999999999998767899999
Q ss_pred eCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEeCCC---------h----------------hHH
Q 021911 175 EFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ---------P----------------DQA 227 (305)
Q Consensus 175 D~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~---------~----------------~~~ 227 (305)
|+|+.+++.+.++++.. . |.+++.|+...... ...+||+|++|+|| | .|.
T Consensus 133 Dis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~--~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~ 209 (464)
T 3m6w_A 133 EVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA--FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQK 209 (464)
T ss_dssp CSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH--HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh--ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHH
Confidence 99997777776666543 4 88999998776532 24789999999996 2 257
Q ss_pred HHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh
Q 021911 228 RILALNASYFLKAGGHFVISIKANCIDSTVPAEAV 262 (305)
Q Consensus 228 ~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v 262 (305)
+++. ++.++|||||+|+|+| |++...+++..+
T Consensus 210 ~iL~-~a~~~LkpGG~LvysT--Cs~~~eEne~vv 241 (464)
T 3m6w_A 210 ALLA-QASRLLGPGGVLVYST--CTFAPEENEGVV 241 (464)
T ss_dssp HHHH-HHHTTEEEEEEEEEEE--SCCCGGGTHHHH
T ss_pred HHHH-HHHHhcCCCcEEEEEe--ccCchhcCHHHH
Confidence 7787 9999999999999999 777776666554
No 11
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.82 E-value=3.4e-19 Score=163.39 Aligned_cols=146 Identities=20% Similarity=0.213 Sum_probs=118.5
Q ss_pred ccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEE
Q 021911 94 LVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYA 173 (305)
Q Consensus 94 ~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~a 173 (305)
.+.....|.++.+++||+ .|++++.++ .++++++|||+|||+|.++.++|+.+.+.+.|+|
T Consensus 72 ~~~~~~~~~~G~~~~Qd~-------------~s~l~~~~l------~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a 132 (309)
T 2b9e_A 72 DLHEHPLYRAGHLILQDR-------------ASCLPAMLL------DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFA 132 (309)
T ss_dssp CCTTSHHHHTTSEEECCT-------------GGGHHHHHH------CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CcccChHHHCCeEEEECH-------------HHHHHHHHh------CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEE
Confidence 356678899999999998 899999988 6889999999999999999999999877789999
Q ss_pred EeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEeCCC---------hh-----------------
Q 021911 174 VEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ---------PD----------------- 225 (305)
Q Consensus 174 vD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~---------~~----------------- 225 (305)
+|+++.+++.+.++++.. .||++++.|+...........+||+|++|+|| |+
T Consensus 133 ~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~ 212 (309)
T 2b9e_A 133 FDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAG 212 (309)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHH
Confidence 999998888777777654 68999999987764321112579999999985 11
Q ss_pred -HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh
Q 021911 226 -QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV 262 (305)
Q Consensus 226 -~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v 262 (305)
|.++|. ++.++|+ +|+|+|+| |++...+++.++
T Consensus 213 ~Q~~iL~-~a~~~l~-gG~lvYsT--Cs~~~~Ene~~v 246 (309)
T 2b9e_A 213 FQQRALC-HALTFPS-LQRLVYST--CSLCQEENEDVV 246 (309)
T ss_dssp HHHHHHH-HHTTCTT-CCEEEEEE--SCCCGGGTHHHH
T ss_pred HHHHHHH-HHHhccC-CCEEEEEC--CCCChHHhHHHH
Confidence 345666 8888887 99999999 777777766554
No 12
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.80 E-value=3.5e-19 Score=172.38 Aligned_cols=144 Identities=23% Similarity=0.254 Sum_probs=119.1
Q ss_pred cCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCC--CCCEEEEEecCCCccHHHHHhhhCCCcEEE
Q 021911 95 VAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIK--PGARVLYLGAASGTTVSHVSDIVGPNGVVY 172 (305)
Q Consensus 95 ~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~--~g~~VLDlG~G~G~~t~~la~~~~~~~~V~ 172 (305)
+.....|.++.+++||+ .|++++.++ .+. ++.+|||+|||+|.++.++|+.+.+.+.|+
T Consensus 86 ~~~~~~~~~G~~~~Qd~-------------~s~l~~~~L------~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~ 146 (479)
T 2frx_A 86 LGSTAEHLSGLFYIQEA-------------SSMLPVAAL------FADGNAPQRVMDVAAAPGSKTTQISARMNNEGAIL 146 (479)
T ss_dssp GGGSHHHHTTSEEECCH-------------HHHHHHHHH------TTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEE
T ss_pred cccChHHhCcEEEEECH-------------HHHHHHHHh------CcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEE
Confidence 34567889999999998 899988887 466 899999999999999999999987678999
Q ss_pred EEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh-------------------------h
Q 021911 173 AVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP-------------------------D 225 (305)
Q Consensus 173 avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~-------------------------~ 225 (305)
|+|+|+.+++.+.++++.. .||.+++.|+...... ....||+|++|+||. .
T Consensus 147 avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~--~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~ 224 (479)
T 2frx_A 147 ANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA--VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAAT 224 (479)
T ss_dssp EECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH--STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh--ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHH
Confidence 9999998877777766543 5899999999876532 246899999999852 2
Q ss_pred HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh
Q 021911 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV 262 (305)
Q Consensus 226 ~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v 262 (305)
|.++|. ++.++|||||+|+|+| |++...+++.++
T Consensus 225 q~~iL~-~a~~~LkpGG~LvysT--cs~~~~Ene~vv 258 (479)
T 2frx_A 225 QRELID-SAFHALRPGGTLVYST--CTLNQEENEAVC 258 (479)
T ss_dssp HHHHHH-HHHHHEEEEEEEEEEE--SCCSSTTTHHHH
T ss_pred HHHHHH-HHHHhcCCCCEEEEec--ccCCcccCHHHH
Confidence 567777 9999999999999999 777777776544
No 13
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.80 E-value=6.7e-19 Score=169.42 Aligned_cols=178 Identities=25% Similarity=0.380 Sum_probs=132.5
Q ss_pred ccCceEEEeC--Cccee-e-eccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEE
Q 021911 75 RHEGVFIAKG--KEDAL-V-TKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYL 150 (305)
Q Consensus 75 ~~~gv~~~~~--~~~~l-~-t~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDl 150 (305)
+..|+-+.+. .++.+ + ....+.....|.++.+++||. .|++++.++ .+.++.+|||+
T Consensus 206 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~-------------~s~l~~~~l------~~~~g~~VLDl 266 (450)
T 2yxl_A 206 EEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKIIVQEE-------------ASAVASIVL------DPKPGETVVDL 266 (450)
T ss_dssp HHTTCCEEECSSCTTEEEEESCCCTTSCHHHHTTSEEECCH-------------HHHHHHHHH------CCCTTCEEEES
T ss_pred HhCCccceecCccCceEEeCCCCCcccCchhhCceEEecCc-------------hhHHHHHhc------CCCCcCEEEEe
Confidence 4455544443 34444 3 223456678899999999998 889988887 57889999999
Q ss_pred ecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh----
Q 021911 151 GAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP---- 224 (305)
Q Consensus 151 G~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~---- 224 (305)
|||+|.++.++++.+...++|+++|+|+.++..+.++++.. +||.+++.|+...... ....+||+|++|+||.
T Consensus 267 gaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~fD~Vl~D~Pcsg~g~ 345 (450)
T 2yxl_A 267 AAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI-IGEEVADKVLLDAPCTSSGT 345 (450)
T ss_dssp SCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS-SCSSCEEEEEEECCCCCGGG
T ss_pred CCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh-hccCCCCEEEEcCCCCCCee
Confidence 99999999999998865589999999998777777766654 5899999999876431 1226899999999852
Q ss_pred -----h----------------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHC-CCcEeE
Q 021911 225 -----D----------------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQD-QFKPFE 279 (305)
Q Consensus 225 -----~----------------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~-Gf~~~e 279 (305)
+ |.+++. ++.++|||||+|+|+| |++...+++..+ ...|+++ +|+++.
T Consensus 346 ~~~~pd~~~~~~~~~~~~l~~~q~~iL~-~a~~~LkpGG~lvy~t--cs~~~~ene~~v----~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 346 IGKNPELRWRLREDKINEMSQLQRELLE-SAARLVKPGGRLLYTT--CSIFKEENEKNI----RWFLNVHPEFKLVP 415 (450)
T ss_dssp TTTSTTHHHHCCTTSHHHHHHHHHHHHH-HHHTTEEEEEEEEEEE--SCCCGGGTHHHH----HHHHHHCSSCEECC
T ss_pred eccChhhhhhCCHHHHHHHHHHHHHHHH-HHHHhcCCCcEEEEEe--CCCChhhHHHHH----HHHHHhCCCCEEee
Confidence 1 466777 9999999999999999 666666555443 1223343 677654
No 14
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.78 E-value=6.7e-19 Score=164.09 Aligned_cols=126 Identities=24% Similarity=0.163 Sum_probs=107.5
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--------CCeEE
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--------TNVIP 196 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--------~nI~~ 196 (305)
.|++++.+| .++|+++|||+|||+|++|+|||+.. ..+.|+|+|+|+.++..+.++++.. .+|.+
T Consensus 136 aS~l~~~~L------~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v 208 (359)
T 4fzv_A 136 ASLLPVLAL------GLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRV 208 (359)
T ss_dssp GGHHHHHHH------CCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEE
T ss_pred HHHHHHHHh------CCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEE
Confidence 899999998 79999999999999999999999975 5678999999998888777776532 47889
Q ss_pred EEccCCCCcccccCCCcEeEEEEeCCCh---------------------------hHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 197 IIEDARHPAKYRMLVGMVDVIFSDVAQP---------------------------DQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 197 ~~~D~~~~~~~~~~~~~fD~V~~d~~~~---------------------------~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
...|++.+... ....||.|++|+||. .|.++|. ++.++|||||+|+|||
T Consensus 209 ~~~D~~~~~~~--~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~-~a~~~lkpGG~LVYsT- 284 (359)
T 4fzv_A 209 TSWDGRKWGEL--EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLA-AGLLATKPGGHVVYST- 284 (359)
T ss_dssp ECCCGGGHHHH--STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHH-HHHHTEEEEEEEEEEE-
T ss_pred EeCchhhcchh--ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEEEEEe-
Confidence 99998876543 356899999999952 3778887 9999999999999999
Q ss_pred ccccCCCCchhhh
Q 021911 250 ANCIDSTVPAEAV 262 (305)
Q Consensus 250 ~~~i~~~~~~~~v 262 (305)
|++...+|+.+|
T Consensus 285 -CSl~~~ENE~vV 296 (359)
T 4fzv_A 285 -CSLSHLQNEYVV 296 (359)
T ss_dssp -SCCCTTTTHHHH
T ss_pred -CCCchhhCHHHH
Confidence 888888888775
No 15
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.77 E-value=1.1e-17 Score=159.83 Aligned_cols=197 Identities=18% Similarity=0.154 Sum_probs=138.7
Q ss_pred ccCceEEEeC--Ccceee-e-ccccCCccccCcceeEeecCCCceeeeeecCchhhHHHHHHHccccccCCCCCCEEEEE
Q 021911 75 RHEGVFIAKG--KEDALV-T-KNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYL 150 (305)
Q Consensus 75 ~~~gv~~~~~--~~~~l~-t-~~~~~~~~~y~e~~~~~~d~~~~~~~~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDl 150 (305)
...|+-..+. .++.+. . ...+...+.|.++.+.+||. .+++++.++ .++++.+|||+
T Consensus 193 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~-------------~s~~~~~~l------~~~~g~~VLDl 253 (429)
T 1sqg_A 193 DEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA-------------SAQGCMTWL------APQNGEHILDL 253 (429)
T ss_dssp HHTTCCEECCTTCTTEEEESSCCCGGGSTTGGGTSEEECCH-------------HHHTHHHHH------CCCTTCEEEEE
T ss_pred HhCCCceeecCCCCCEEEECCCCCcccChHHhCCCeEeeCH-------------HHHHHHHHc------CCCCcCeEEEE
Confidence 3455544433 234442 2 12345668899999999998 888888887 57889999999
Q ss_pred ecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh-----
Q 021911 151 GAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP----- 224 (305)
Q Consensus 151 G~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~----- 224 (305)
|||+|.++.++++.+. .++|+++|+|+.++..+.++++.. .++.+++.|+...... ....+||+|++|+||.
T Consensus 254 gaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~-~~~~~fD~Vl~D~Pcsg~g~~ 331 (429)
T 1sqg_A 254 CAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW-CGEQQFDRILLDAPCSATGVI 331 (429)
T ss_dssp SCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH-HTTCCEEEEEEECCCCCGGGT
T ss_pred CCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh-cccCCCCEEEEeCCCCccccc
Confidence 9999999999999863 479999999998877777776654 3688999999877532 1236899999999852
Q ss_pred --------------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHH-CCCcEeE----
Q 021911 225 --------------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ-DQFKPFE---- 279 (305)
Q Consensus 225 --------------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~-~Gf~~~e---- 279 (305)
.|.+++. ++.++|||||+|+|+| |++...+++..+ . ..+++ .+|+++.
T Consensus 332 ~~~p~~~~~~~~~~~~~l~~~q~~~L~-~a~~~LkpGG~lvyst--cs~~~~ene~~v-~---~~l~~~~~~~~~~~~~~ 404 (429)
T 1sqg_A 332 RRHPDIKWLRRDRDIPELAQLQSEILD-AIWPHLKTGGTLVYAT--CSVLPEENSLQI-K---AFLQRTADAELCETGTP 404 (429)
T ss_dssp TTCTTHHHHCCTTHHHHHHHHHHHHHH-HHGGGEEEEEEEEEEE--SCCCGGGTHHHH-H---HHHHHCTTCEECSSBCS
T ss_pred CCCcchhhcCCHHHHHHHHHHHHHHHH-HHHHhcCCCCEEEEEE--CCCChhhHHHHH-H---HHHHhCCCCEEeCCCCC
Confidence 2457777 9999999999999999 666666665443 1 22333 3566644
Q ss_pred ---EeecCCCC-CceEEEEEEEcC
Q 021911 280 ---QVTLEPFE-RDHACVVGGYRM 299 (305)
Q Consensus 280 ---~~~l~p~~-~~~~~vv~~~~~ 299 (305)
.+.+.|.. ....+++++.++
T Consensus 405 ~~~~~~~~P~~~~~dGff~a~l~k 428 (429)
T 1sqg_A 405 EQPGKQNLPGAEEGDGFFYAKLIK 428 (429)
T ss_dssp SSBSEEECCCTTSCCSEEEEEEEC
T ss_pred CCCeEEECCCCCCCCceEEEEEEE
Confidence 12344543 223445665544
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.69 E-value=1.4e-15 Score=131.21 Aligned_cols=154 Identities=18% Similarity=0.127 Sum_probs=112.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++...+..+|+++|+|+.++..+.+.+... +++.+++.|+.+.+. ...+||+|
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v 110 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL---PDNTVDFI 110 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS---CSSCEEEE
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC---CCCCeeEE
Confidence 5678899999999999999999999766779999999996665555554432 579999999977542 35689999
Q ss_pred EEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCC-chh-hh-HHHHHHHHHHCCCcEeEEeecCCCCCceE
Q 021911 218 FSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTV-PAE-AV-FQSEVKKLQQDQFKPFEQVTLEPFERDHA 291 (305)
Q Consensus 218 ~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~-~~~-~v-~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~ 291 (305)
+++.. .++...++. ++.++|||||+|++++......... ... .. ..+..+.++++||++++...+.+. ++
T Consensus 111 ~~~~~l~~~~~~~~~l~-~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~---~~ 186 (219)
T 3dh0_A 111 FMAFTFHELSEPLKFLE-ELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKY---CF 186 (219)
T ss_dssp EEESCGGGCSSHHHHHH-HHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTT---EE
T ss_pred EeehhhhhcCCHHHHHH-HHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCc---eE
Confidence 99766 456677777 9999999999999987322211111 111 11 122346668999999998877664 78
Q ss_pred EEEEEEcCC
Q 021911 292 CVVGGYRMP 300 (305)
Q Consensus 292 ~vv~~~~~~ 300 (305)
+++++++..
T Consensus 187 ~~~~~k~~~ 195 (219)
T 3dh0_A 187 GVYAMIVKQ 195 (219)
T ss_dssp EEEEECC--
T ss_pred EEEEEeccc
Confidence 888887654
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.69 E-value=5e-16 Score=138.97 Aligned_cols=104 Identities=22% Similarity=0.270 Sum_probs=82.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEe
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.++|+.+|||||||+|..+..|++.+. +..+|++||+|+.+++.+.+.++.. .+|++++.|+.+.+ .+.||
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-----~~~~d 141 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-----IENAS 141 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-----CCSEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-----ccccc
Confidence 578999999999999999999998864 4568999999995555554444432 58999999998764 35799
Q ss_pred EEEEeCC----C-hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 216 VIFSDVA----Q-PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 216 ~V~~d~~----~-~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+|++... . ++...+|. +++++|||||.|+++.+
T Consensus 142 ~v~~~~~l~~~~~~~~~~~l~-~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 142 MVVLNFTLQFLEPSERQALLD-KIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred cceeeeeeeecCchhHhHHHH-HHHHHcCCCcEEEEEec
Confidence 9999765 2 23445666 99999999999999874
No 18
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=5.7e-16 Score=131.69 Aligned_cols=159 Identities=16% Similarity=0.196 Sum_probs=111.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.++++.+|||+|||+|.++..+++.+++.++|+++|+|+.+++.+.+.++.. +++.+++.|+.+.... ...+||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY--IDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT--CCSCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh--ccCCceE
Confidence 4678899999999999999999999877779999999997766666665553 5799999998776532 3478999
Q ss_pred EEEeCCC-h-----------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecC
Q 021911 217 IFSDVAQ-P-----------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 217 V~~d~~~-~-----------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~ 284 (305)
|+++++. + +..+++. ++.++|||||+|++++...+... ......+......+...+|++.....++
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~Lk~gG~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~v~~~~~~~ 174 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALS-KAMELLVTGGIITVVIYYGGDTG-FEEKEKVLEFLKGVDQKKFIVQRTDFIN 174 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHH-HHHHHEEEEEEEEEEECCBTTTB-SHHHHHHHHHHTTSCTTTEEEEEEEETT
T ss_pred EEEcCCcccCcccccccCcccHHHHHH-HHHHhCcCCCEEEEEEccCCCCc-HHHHHHHHHHHHhCCCCcEEEEEEEecc
Confidence 9998853 1 3445666 99999999999999874322111 1112222233334455678887766555
Q ss_pred CCCCceEEEEEEEcCCCC
Q 021911 285 PFERDHACVVGGYRMPKK 302 (305)
Q Consensus 285 p~~~~~~~vv~~~~~~~~ 302 (305)
.....-++++..++.-..
T Consensus 175 ~~~~pp~~~~~~~~~~~~ 192 (197)
T 3eey_A 175 QANCPPILVCIEKISEGH 192 (197)
T ss_dssp CCSCCCEEEEEEECCSSC
T ss_pred CccCCCeEEEEEEccccc
Confidence 444444556665555443
No 19
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=2.7e-15 Score=132.45 Aligned_cols=155 Identities=21% Similarity=0.126 Sum_probs=110.5
Q ss_pred eeecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCe
Q 021911 118 YRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNV 194 (305)
Q Consensus 118 ~~~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI 194 (305)
++.++|........++..+ .+.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.+.+.++.. ++|
T Consensus 14 ~~~~~~~~~~~~~~l~~~~---~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v 88 (256)
T 1nkv_A 14 HRIHNPFTEEKYATLGRVL---RMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERV 88 (256)
T ss_dssp CSSSSSCCHHHHHHHHHHT---CCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTE
T ss_pred ccccCCCCHHHHHHHHHhc---CCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcce
Confidence 4455666666666665433 57789999999999999999999986 358999999997766666655543 489
Q ss_pred EEEEccCCCCcccccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCch-----------h
Q 021911 195 IPIIEDARHPAKYRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPA-----------E 260 (305)
Q Consensus 195 ~~~~~D~~~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~-----------~ 260 (305)
.+++.|+.+.+. .++||+|++... .++...++. ++.++|||||+|++++........... .
T Consensus 89 ~~~~~d~~~~~~----~~~fD~V~~~~~~~~~~~~~~~l~-~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T 1nkv_A 89 HFIHNDAAGYVA----NEKCDVAACVGATWIAGGFAGAEE-LLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSD 163 (256)
T ss_dssp EEEESCCTTCCC----SSCEEEEEEESCGGGTSSSHHHHH-HHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGG
T ss_pred EEEECChHhCCc----CCCCCEEEECCChHhcCCHHHHHH-HHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccc
Confidence 999999987642 478999998655 346677777 999999999999998732111110000 0
Q ss_pred h-hHHHHHHHHHHCCCcEeEEee
Q 021911 261 A-VFQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 261 ~-v~~~~~~~l~~~Gf~~~e~~~ 282 (305)
. ......+.|+++||++++...
T Consensus 164 ~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 164 FLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp SCCHHHHHHHHHTTTBCCCEEEE
T ss_pred cCCHHHHHHHHHHCCCeeEEEEe
Confidence 0 112335667889999887643
No 20
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.65 E-value=4.5e-15 Score=132.22 Aligned_cols=156 Identities=17% Similarity=0.185 Sum_probs=112.2
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEE
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPI 197 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~ 197 (305)
+.|........++..+. .+.++.+|||+|||+|.++..+++. +..+|++||+|+..+..+.+.++.. ++|.++
T Consensus 26 ~~~~~~~~~~~~l~~l~--~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 101 (267)
T 3kkz_A 26 QGPGSPEVTLKALSFID--NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGI 101 (267)
T ss_dssp SSSCCHHHHHHHHTTCC--CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred cCCCCHHHHHHHHHhcc--cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEE
Confidence 44555566666766554 4678899999999999999999998 5679999999997666666655544 569999
Q ss_pred EccCCCCcccccCCCcEeEEEEeCC--ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhh-h----------HH
Q 021911 198 IEDARHPAKYRMLVGMVDVIFSDVA--QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEA-V----------FQ 264 (305)
Q Consensus 198 ~~D~~~~~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~-v----------~~ 264 (305)
+.|+.+.+. ..++||+|++..+ ..+...++. ++.++|||||+|++++............. . ..
T Consensus 102 ~~d~~~~~~---~~~~fD~i~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (267)
T 3kkz_A 102 VGSMDDLPF---RNEELDLIWSEGAIYNIGFERGLN-EWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIP 177 (267)
T ss_dssp ECCTTSCCC---CTTCEEEEEESSCGGGTCHHHHHH-HHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHH
T ss_pred EcChhhCCC---CCCCEEEEEEcCCceecCHHHHHH-HHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHH
Confidence 999977642 2579999999766 235667776 99999999999999874211111111111 1 12
Q ss_pred HHHHHHHHCCCcEeEEeecC
Q 021911 265 SEVKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 265 ~~~~~l~~~Gf~~~e~~~l~ 284 (305)
...+.|+++||++++...+.
T Consensus 178 ~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 178 NQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp HHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEECC
Confidence 23466789999999887654
No 21
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.64 E-value=1.8e-15 Score=127.28 Aligned_cols=138 Identities=13% Similarity=0.133 Sum_probs=94.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+.+.++.. +++++++.|+...... ...+||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~--~~~~fD~v 93 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY--VREPIRAA 93 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT--CCSCEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh--ccCCcCEE
Confidence 4678899999999999999999987 469999999996666655555433 6899999777654332 25689999
Q ss_pred EEeCC-----------C-hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecC
Q 021911 218 FSDVA-----------Q-PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 218 ~~d~~-----------~-~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~ 284 (305)
+++++ . .++..++. ++.++|||||+|++++...+... ..+...+......+...+|.+.....+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIE-KILDRLEVGGRLAIMIYYGHDGG-DMEKDAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp EEEEC-----------CHHHHHHHHH-HHHHHEEEEEEEEEEEC-------CHHHHHHHHHHHHSCTTTEEEEEEEESS
T ss_pred EEeCCCCCCcchhcccChhhHHHHHH-HHHHhcCCCcEEEEEEeCCCCCC-HHHHHHHHHHHHhCCCceEEEEEehhhc
Confidence 99853 1 23445555 89999999999999873222111 1122223333455555678877766554
No 22
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.64 E-value=4.8e-15 Score=133.66 Aligned_cols=146 Identities=14% Similarity=0.024 Sum_probs=104.7
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
++++.+|||+|||+|.++..+|... .. +|+++|+|+.+++.+.++++.+ .++++++.|+.+... ..+||+|
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----~~~fD~V 196 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----ENIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC----CSCEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc----cCCccEE
Confidence 5678999999999999999999984 23 7999999997777777666654 348999999988753 4689999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeE-----EeecCCCCCceEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFE-----QVTLEPFERDHAC 292 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e-----~~~l~p~~~~~~~ 292 (305)
++|+|... .+++. ++.++|||||+|++.+ +. .........+....+.+++.||++.. ...+.|. .+|.+
T Consensus 197 i~~~p~~~-~~~l~-~~~~~LkpgG~l~~~~--~~-~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~v~~~~p~-~~h~~ 270 (278)
T 2frn_A 197 LMGYVVRT-HEFIP-KALSIAKDGAIIHYHN--TV-PEKLMPREPFETFKRITKEYGYDVEKLNELKIKRYAPG-VWHVV 270 (278)
T ss_dssp EECCCSSG-GGGHH-HHHHHEEEEEEEEEEE--EE-EGGGTTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETTT-EEEEE
T ss_pred EECCchhH-HHHHH-HHHHHCCCCeEEEEEE--ee-ccccccccHHHHHHHHHHHcCCeeEEeeeEEEEecCCC-ceEEE
Confidence 99988433 45555 8889999999999987 22 11111122233335666888998766 3444443 46666
Q ss_pred EEEEEc
Q 021911 293 VVGGYR 298 (305)
Q Consensus 293 vv~~~~ 298 (305)
+-.+..
T Consensus 271 ~d~~v~ 276 (278)
T 2frn_A 271 LDLRVF 276 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 655544
No 23
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.64 E-value=1e-14 Score=127.02 Aligned_cols=116 Identities=16% Similarity=0.137 Sum_probs=87.6
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCC
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHP 204 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~ 204 (305)
...+...++..+. ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.++..+.+.+....++.+++.|+.+.
T Consensus 28 ~~~~~~~~~~~~~--~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 104 (234)
T 3dtn_A 28 FDDFYGVSVSIAS--VDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHHHTCC--CSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTC
T ss_pred HHHHHHHHHHHhh--cCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhcc
Confidence 3444455554443 35677999999999999999999986 56799999999955555444444445899999999876
Q ss_pred cccccCCCcEeEEEEeCC---Ch--hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 205 AKYRMLVGMVDVIFSDVA---QP--DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 205 ~~~~~~~~~fD~V~~d~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+. ..+||+|++..+ .+ +..+++. ++.++|||||+|++++
T Consensus 105 ~~----~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 105 DF----EEKYDMVVSALSIHHLEDEDKKELYK-RSYSILKESGIFINAD 148 (234)
T ss_dssp CC----CSCEEEEEEESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred CC----CCCceEEEEeCccccCCHHHHHHHHH-HHHHhcCCCcEEEEEE
Confidence 52 279999999776 22 2234666 9999999999999987
No 24
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.63 E-value=3.2e-15 Score=123.96 Aligned_cols=145 Identities=13% Similarity=0.168 Sum_probs=105.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-CCCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-RTNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-~~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+.++.+|||+|||+|.++..+++.. .+|+++|+|+ .+++.+++ .+++.+++.| .+ ...++||+|+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~----~~~~~a~~~~~~v~~~~~d---~~---~~~~~~D~v~ 80 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINV----IALKEVKEKFDSVITLSDP---KE---IPDNSVDFIL 80 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCH----HHHHHHHHHCTTSEEESSG---GG---SCTTCEEEEE
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCH----HHHHHHHHhCCCcEEEeCC---CC---CCCCceEEEE
Confidence 46788999999999999999999985 3899999999 44545444 3789999999 11 2357899999
Q ss_pred EeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCch-h-hhHHHHHHHHHHCCCcEeEEeecCCCCCceEEE
Q 021911 219 SDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPA-E-AVFQSEVKKLQQDQFKPFEQVTLEPFERDHACV 293 (305)
Q Consensus 219 ~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~-~-~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~v 293 (305)
+... .++...++. ++.++|||||+|++++..........+ . ..-.+++..+-+ ||++++...+.++ ++.+
T Consensus 81 ~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf~~~~~~~~~~~---~~~l 155 (170)
T 3i9f_A 81 FANSFHDMDDKQHVIS-EVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NFVVEKRFNPTPY---HFGL 155 (170)
T ss_dssp EESCSTTCSCHHHHHH-HHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TEEEEEEECSSTT---EEEE
T ss_pred EccchhcccCHHHHHH-HHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-CcEEEEccCCCCc---eEEE
Confidence 9766 346677777 999999999999998743221111111 1 122334444444 9999998888777 8888
Q ss_pred EEEEcCCCC
Q 021911 294 VGGYRMPKK 302 (305)
Q Consensus 294 v~~~~~~~~ 302 (305)
++.+..++-
T Consensus 156 ~~~~~~~~~ 164 (170)
T 3i9f_A 156 VLKRKTSEG 164 (170)
T ss_dssp EEEECCCCS
T ss_pred EEecCCCCc
Confidence 888887754
No 25
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=1e-14 Score=129.77 Aligned_cols=145 Identities=12% Similarity=0.126 Sum_probs=104.6
Q ss_pred CCC-CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEe
Q 021911 140 WIK-PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 140 ~~~-~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.++ ++.+|||+|||+|.++..++... ..+|++||+++.+++.+.++++.. .++.+++.|+.+.... ....+||
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~-~~~~~fD 121 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL-IPKERAD 121 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-SCTTCEE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-hccCCcc
Confidence 466 78999999999999999999883 349999999997766666655544 3699999999876532 2257999
Q ss_pred EEEEeCCCh-----------------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHH
Q 021911 216 VIFSDVAQP-----------------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ 272 (305)
Q Consensus 216 ~V~~d~~~~-----------------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~ 272 (305)
+|++|+|.. +...++. .+.++|||+|+|++.... ....+....+++
T Consensus 122 ~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~----------~~~~~~~~~l~~ 190 (259)
T 3lpm_A 122 IVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIR-VAASLLKQGGKANFVHRP----------ERLLDIIDIMRK 190 (259)
T ss_dssp EEEECCCC-----------------------HHHHHHHH-HHHHHEEEEEEEEEEECT----------TTHHHHHHHHHH
T ss_pred EEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHH-HHHHHccCCcEEEEEEcH----------HHHHHHHHHHHH
Confidence 999998831 1234555 899999999999997621 112334566778
Q ss_pred CCCcEeEEeecCCCCC---ceEEEEEEEc
Q 021911 273 DQFKPFEQVTLEPFER---DHACVVGGYR 298 (305)
Q Consensus 273 ~Gf~~~e~~~l~p~~~---~~~~vv~~~~ 298 (305)
.+|.+..+..+.|... ...++.+++.
T Consensus 191 ~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 191 YRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp TTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred CCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 8999988777666433 2344445543
No 26
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.63 E-value=9.1e-15 Score=129.15 Aligned_cols=128 Identities=20% Similarity=0.196 Sum_probs=99.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++.+++..+|+++|+|+.+++.+.+.++.. +++.+++.|+.+.+ ....+||+
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---~~~~~~D~ 169 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE---LEEAAYDG 169 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC---CCTTCEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC---CCCCCcCE
Confidence 5788999999999999999999999877789999999997776666665443 68999999987652 12468999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEee
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~ 282 (305)
|+++++.+. .++. ++.++|||||+|++.++ + ...+.+.++.|++.||..++..+
T Consensus 170 v~~~~~~~~--~~l~-~~~~~L~~gG~l~~~~~--~-------~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 170 VALDLMEPW--KVLE-KAALALKPDRFLVAYLP--N-------ITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp EEEESSCGG--GGHH-HHHHHEEEEEEEEEEES--C-------HHHHHHHHHHHTTTTEEEEEEEE
T ss_pred EEECCcCHH--HHHH-HHHHhCCCCCEEEEEeC--C-------HHHHHHHHHHHHHCCCceEEEEE
Confidence 999987654 4566 88999999999999872 2 11234456777788998776554
No 27
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.62 E-value=1.8e-14 Score=127.21 Aligned_cols=156 Identities=16% Similarity=0.180 Sum_probs=110.5
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEE
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPI 197 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~ 197 (305)
+.|....+...++..+. .+.++.+|||+|||+|.++..+++... .+|+++|+|+..+..+.+.+... .++.++
T Consensus 26 ~~~~~~~~~~~~l~~l~--~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 101 (257)
T 3f4k_A 26 QGPGSPEATRKAVSFIN--ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGI 101 (257)
T ss_dssp SSSCCHHHHHHHHTTSC--CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred cCCCCHHHHHHHHHHHh--cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 34555566777766554 467788999999999999999999853 49999999996666665555543 359999
Q ss_pred EccCCCCcccccCCCcEeEEEEeCC--ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh-hh----------HH
Q 021911 198 IEDARHPAKYRMLVGMVDVIFSDVA--QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAE-AV----------FQ 264 (305)
Q Consensus 198 ~~D~~~~~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~-~v----------~~ 264 (305)
+.|+...+. ...+||+|+++.. +.+...++. ++.++|||||+|++++............ .. ..
T Consensus 102 ~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (257)
T 3f4k_A 102 TGSMDNLPF---QNEELDLIWSEGAIYNIGFERGMN-EWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIP 177 (257)
T ss_dssp ECCTTSCSS---CTTCEEEEEEESCSCCCCHHHHHH-HHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHH
T ss_pred ECChhhCCC---CCCCEEEEEecChHhhcCHHHHHH-HHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHH
Confidence 999976642 3579999999765 335677777 9999999999999987321111111000 00 12
Q ss_pred HHHHHHHHCCCcEeEEeecC
Q 021911 265 SEVKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 265 ~~~~~l~~~Gf~~~e~~~l~ 284 (305)
...+.|+++||++++...+.
T Consensus 178 ~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 178 TCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHCCCeEEEEEECC
Confidence 23466789999999876554
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=1.3e-14 Score=124.10 Aligned_cols=123 Identities=19% Similarity=0.176 Sum_probs=96.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.+.+.++.. +++.+++.|+.+.... ...||+|
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D~i 112 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD---LPDPDRV 112 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT---SCCCSEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc---CCCCCEE
Confidence 57789999999999999999999984 5679999999997666665555433 6899999999665432 2679999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCc
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFK 276 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~ 276 (305)
+++.+..+...++. ++.++|||||+|++++. . ........+.+++.||.
T Consensus 113 ~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~--~-------~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 113 FIGGSGGMLEEIID-AVDRRLKSEGVIVLNAV--T-------LDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp EESCCTTCHHHHHH-HHHHHCCTTCEEEEEEC--B-------HHHHHHHHHHHHHTTCE
T ss_pred EECCCCcCHHHHHH-HHHHhcCCCeEEEEEec--c-------cccHHHHHHHHHHCCCc
Confidence 99988778888887 99999999999999862 1 11223345677889983
No 29
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.61 E-value=2.2e-14 Score=126.16 Aligned_cols=149 Identities=14% Similarity=0.058 Sum_probs=102.7
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
+.++.+|||+|||+|..+..++... +..+|++||+|+.++..+.+.++.. +||++++.|+.+.........+||+|+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEE
Confidence 3567899999999999999999753 5679999999996666555554433 579999999865432101146899999
Q ss_pred EeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeec-CCC-CCceEEEEEE
Q 021911 219 SDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTL-EPF-ERDHACVVGG 296 (305)
Q Consensus 219 ~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l-~p~-~~~~~~vv~~ 296 (305)
++.. .+...++. .+.++|||||+|++.. .. . .........+.+++.||++.+...+ .|. ...+.+++..
T Consensus 147 ~~~~-~~~~~~l~-~~~~~LkpgG~l~~~~--g~----~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 147 ARAV-ARLSVLSE-LCLPLVKKNGLFVALK--AA----S-AEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIR 217 (240)
T ss_dssp EECC-SCHHHHHH-HHGGGEEEEEEEEEEE--CC------CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred Eecc-CCHHHHHH-HHHHhcCCCCEEEEEe--CC----C-chHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEE
Confidence 9874 45566776 9999999999999875 11 1 1112233346678899998876543 333 2345555555
Q ss_pred EcC
Q 021911 297 YRM 299 (305)
Q Consensus 297 ~~~ 299 (305)
+..
T Consensus 218 k~~ 220 (240)
T 1xdz_A 218 KIK 220 (240)
T ss_dssp ECS
T ss_pred ecC
Confidence 543
No 30
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.61 E-value=7.3e-15 Score=138.28 Aligned_cols=144 Identities=19% Similarity=0.227 Sum_probs=102.1
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----------CCeEEEEccCCCCccc---
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----------TNVIPIIEDARHPAKY--- 207 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----------~nI~~~~~D~~~~~~~--- 207 (305)
+.++.+|||+|||+|.++..+++.+++..+|+++|+|+.++..+.+.++.. ++|.+++.|+.+....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 567899999999999999999999877789999999995544444333211 6899999999876321
Q ss_pred ccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh-------------hhHHHHHHHHH
Q 021911 208 RMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAE-------------AVFQSEVKKLQ 271 (305)
Q Consensus 208 ~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~-------------~v~~~~~~~l~ 271 (305)
....++||+|+++.. .++...++. ++.++|||||+|++++............ ....+..+.|+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~-~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 239 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFK-EIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVA 239 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHH-HHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHH
Confidence 233579999999877 467777887 9999999999999986322111000000 01123356678
Q ss_pred HCCCcEeEEeecCC
Q 021911 272 QDQFKPFEQVTLEP 285 (305)
Q Consensus 272 ~~Gf~~~e~~~l~p 285 (305)
++||+.++++...+
T Consensus 240 ~aGF~~v~~~~~~~ 253 (383)
T 4fsd_A 240 EAGFRDVRLVSVGP 253 (383)
T ss_dssp HTTCCCEEEEEEEE
T ss_pred HCCCceEEEEeccc
Confidence 99999887665443
No 31
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.61 E-value=3.3e-14 Score=123.62 Aligned_cols=130 Identities=17% Similarity=0.175 Sum_probs=96.2
Q ss_pred CCCCCCEEEEEecC-CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAA-SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G-~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++++.+|||+||| +|.++..++... ..+|+++|+|+.+++.+.+.++.. .++.+++.|+...... ...+||+|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~I 127 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGV--VEGTFDVI 127 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTT--CCSCEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhc--ccCceeEE
Confidence 45788999999999 999999999985 469999999997766666665554 3799999997654332 24789999
Q ss_pred EEeCCChh----------------------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCC
Q 021911 218 FSDVAQPD----------------------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQF 275 (305)
Q Consensus 218 ~~d~~~~~----------------------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf 275 (305)
++|+|... ...++. ++.++|||||+|++.+.. .........+.+++.||
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~--------~~~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLE-EAFDHLNPGGKVALYLPD--------KEKLLNVIKERGIKLGY 198 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHH-HHGGGEEEEEEEEEEEES--------CHHHHHHHHHHHHHTTC
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHH-HHHHHhCCCeEEEEEecc--------cHhHHHHHHHHHHHcCC
Confidence 99988311 245565 899999999999998621 11222334567788999
Q ss_pred cEeEEee
Q 021911 276 KPFEQVT 282 (305)
Q Consensus 276 ~~~e~~~ 282 (305)
++..+..
T Consensus 199 ~~~~~~~ 205 (230)
T 3evz_A 199 SVKDIKF 205 (230)
T ss_dssp EEEEEEE
T ss_pred ceEEEEe
Confidence 7766543
No 32
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=1.1e-14 Score=124.10 Aligned_cols=146 Identities=13% Similarity=0.113 Sum_probs=105.5
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
+.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++ +++.+++.|+.+.+. ...+||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~----~~~~~a~~~~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPAT----RLVELARQTHPSVTFHHGTITDLSD---SPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCH----HHHHHHHHHCTTSEEECCCGGGGGG---SCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCH----HHHHHHHHhCCCCeEEeCccccccc---CCCCeEEEEehhh
Confidence 789999999999999999987 24899999999 556666554 689999999977542 3579999999665
Q ss_pred -----ChhHHHHHHHHHhccCCCCcEEEEEEccccc----CCCCc-hhh-hHHHHHHHHHHCCCcEeEEeecCCCCCceE
Q 021911 223 -----QPDQARILALNASYFLKAGGHFVISIKANCI----DSTVP-AEA-VFQSEVKKLQQDQFKPFEQVTLEPFERDHA 291 (305)
Q Consensus 223 -----~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i----~~~~~-~~~-v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~ 291 (305)
..+...++. ++.++|||||+|++++..... ..... ... -..+..+.|+++||++++.....+ +.|.
T Consensus 112 l~~~~~~~~~~~l~-~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~ 188 (203)
T 3h2b_A 112 LIHMGPGELPDALV-ALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHA 188 (203)
T ss_dssp STTCCTTTHHHHHH-HHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEE
T ss_pred HhcCCHHHHHHHHH-HHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccch
Confidence 236677777 999999999999998743221 00000 001 122334667899999999888777 7777
Q ss_pred EEEEEEcCCCC
Q 021911 292 CVVGGYRMPKK 302 (305)
Q Consensus 292 ~vv~~~~~~~~ 302 (305)
++...+..+..
T Consensus 189 ~l~~~~~~~~~ 199 (203)
T 3h2b_A 189 YLTAEASLEHH 199 (203)
T ss_dssp EEEEEECC---
T ss_pred hhhhhhhhhhh
Confidence 77777666543
No 33
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=2e-14 Score=122.92 Aligned_cols=139 Identities=12% Similarity=0.073 Sum_probs=102.9
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
+.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+.+.+... .++.+++.|+.... ..+||+|+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-----DGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-----CSCEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-----CCCceEEE
Confidence 567899999999999999998875 4569999999996666665555543 45999999997643 47899999
Q ss_pred EeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEc
Q 021911 219 SDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 219 ~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~ 298 (305)
++.+......++. ++.++|||+|+|++++... .......+.+++.||++++.... ..+..++.+.+
T Consensus 131 ~~~~~~~~~~~l~-~~~~~L~~gG~l~~~~~~~---------~~~~~~~~~~~~~Gf~~~~~~~~----~~w~~~~~~~~ 196 (205)
T 3grz_A 131 ANILAEILLDLIP-QLDSHLNEDGQVIFSGIDY---------LQLPKIEQALAENSFQIDLKMRA----GRWIGLAISRK 196 (205)
T ss_dssp EESCHHHHHHHGG-GSGGGEEEEEEEEEEEEEG---------GGHHHHHHHHHHTTEEEEEEEEE----TTEEEEEEEEC
T ss_pred ECCcHHHHHHHHH-HHHHhcCCCCEEEEEecCc---------ccHHHHHHHHHHcCCceEEeecc----CCEEEEEEecc
Confidence 9998777777777 9999999999999975211 01223346678899999887643 33454555444
Q ss_pred CC
Q 021911 299 MP 300 (305)
Q Consensus 299 ~~ 300 (305)
..
T Consensus 197 ~~ 198 (205)
T 3grz_A 197 HE 198 (205)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 34
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.60 E-value=1.7e-14 Score=129.51 Aligned_cols=128 Identities=18% Similarity=0.200 Sum_probs=100.3
Q ss_pred cCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEe
Q 021911 139 IWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
+.+.++.+|||+|||+|.++.++++.+.+..+|+++|+|+.+++.+.+.++.. +++.+++.|+.+.. ...+||
T Consensus 106 ~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~----~~~~fD 181 (275)
T 1yb2_A 106 CGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI----SDQMYD 181 (275)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC----CSCCEE
T ss_pred cCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC----cCCCcc
Confidence 36788999999999999999999998666789999999997777776666554 58999999998732 246899
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEee
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~ 282 (305)
+|+++++.++ .++. ++.++|||||+|++++. + .....+..+.|++.||+.++...
T Consensus 182 ~Vi~~~~~~~--~~l~-~~~~~LkpgG~l~i~~~--~-------~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 182 AVIADIPDPW--NHVQ-KIASMMKPGSVATFYLP--N-------FDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEEECCSCGG--GSHH-HHHHTEEEEEEEEEEES--S-------HHHHHHHHHHSGGGTEEEEEEEE
T ss_pred EEEEcCcCHH--HHHH-HHHHHcCCCCEEEEEeC--C-------HHHHHHHHHHHHHCCCeEEEEEE
Confidence 9999887653 5566 88999999999999982 2 11223335666788999887665
No 35
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.58 E-value=2.5e-14 Score=123.39 Aligned_cols=129 Identities=13% Similarity=0.150 Sum_probs=97.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
..++.+|||||||+|.++..+|... +..+|++||+|+.++..+.+.+... +||.+++.|+.+.... ....+||+|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~D~i~ 116 (214)
T 1yzh_A 39 GNDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY-FEDGEIDRLY 116 (214)
T ss_dssp TSCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT-SCTTCCSEEE
T ss_pred CCCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh-cCCCCCCEEE
Confidence 3567899999999999999999985 5679999999997766666655433 6899999999875421 2346899999
Q ss_pred EeCCChh-----------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe
Q 021911 219 SDVAQPD-----------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 219 ~d~~~~~-----------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~ 281 (305)
++.+.+. +..++. ++.++|||||.|++.+. ....+....+.+.+.||++.+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLD-TFKRILPENGEIHFKTD---------NRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHH-HHHHHSCTTCEEEEEES---------CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EECCCCccccchhhhccCCHHHHH-HHHHHcCCCcEEEEEeC---------CHHHHHHHHHHHHHCCCeeeecc
Confidence 9988542 345666 89999999999999871 12233344566777899887654
No 36
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=2e-14 Score=123.11 Aligned_cols=118 Identities=17% Similarity=0.225 Sum_probs=90.5
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEE
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPI 197 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~ 197 (305)
|.|....+...++..+ .++++ +|||+|||+|.++..+++. +..+|+++|+|+.++..+.+.++.. .++.++
T Consensus 25 ~~~~~~~~~~~~~~~~---~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 98 (219)
T 3dlc_A 25 FAPIYPIIAENIINRF---GITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIV 98 (219)
T ss_dssp TTTHHHHHHHHHHHHH---CCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred hccccHHHHHHHHHhc---CCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEE
Confidence 4444455555554332 34555 9999999999999999998 5579999999996666665555543 479999
Q ss_pred EccCCCCcccccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 198 IEDARHPAKYRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 198 ~~D~~~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.|+.+.+ ....+||+|+++.. .++...++. ++.++|||||+|+++.
T Consensus 99 ~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 99 QGDVHNIP---IEDNYADLIVSRGSVFFWEDVATAFR-EIYRILKSGGKTYIGG 148 (219)
T ss_dssp ECBTTBCS---SCTTCEEEEEEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred EcCHHHCC---CCcccccEEEECchHhhccCHHHHHH-HHHHhCCCCCEEEEEe
Confidence 99998754 23579999999776 456677777 9999999999999986
No 37
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.58 E-value=3.6e-14 Score=125.49 Aligned_cols=147 Identities=18% Similarity=0.233 Sum_probs=103.8
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEcc
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIED 200 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D 200 (305)
...+...++. .+.+.++.+|||+|||+|.++..+++.+ ..+|+++|+|+ .+++.++++ +++.+++.|
T Consensus 40 ~~~~~~~~~~---~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~~~d 110 (266)
T 3ujc_A 40 GLEATKKILS---DIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICS----NIVNMANERVSGNNKIIFEAND 110 (266)
T ss_dssp HHHHHHHHTT---TCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCH----HHHHHHHHTCCSCTTEEEEECC
T ss_pred hHHHHHHHHH---hcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCH----HHHHHHHHHhhcCCCeEEEECc
Confidence 3344455543 3357788999999999999999999986 36999999999 555555544 689999999
Q ss_pred CCCCcccccCCCcEeEEEEeCC---C--hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhh------------hH
Q 021911 201 ARHPAKYRMLVGMVDVIFSDVA---Q--PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEA------------VF 263 (305)
Q Consensus 201 ~~~~~~~~~~~~~fD~V~~d~~---~--~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~------------v~ 263 (305)
+.+.+. ..++||+|++... . ++...++. ++.++|||||+|++++............. ..
T Consensus 111 ~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (266)
T 3ujc_A 111 ILTKEF---PENNFDLIYSRDAILALSLENKNKLFQ-KCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITV 186 (266)
T ss_dssp TTTCCC---CTTCEEEEEEESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCH
T ss_pred cccCCC---CCCcEEEEeHHHHHHhcChHHHHHHHH-HHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCH
Confidence 987642 3579999999765 2 56667776 99999999999999874221100111100 01
Q ss_pred HHHHHHHHHCCCcEeEEeecC
Q 021911 264 QSEVKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 264 ~~~~~~l~~~Gf~~~e~~~l~ 284 (305)
....+.|+++||++++...+.
T Consensus 187 ~~~~~~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 187 EEYADILTACNFKNVVSKDLS 207 (266)
T ss_dssp HHHHHHHHHTTCEEEEEEECH
T ss_pred HHHHHHHHHcCCeEEEEEeCC
Confidence 122456688999998877543
No 38
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.58 E-value=4e-14 Score=125.69 Aligned_cols=147 Identities=15% Similarity=0.025 Sum_probs=101.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
+.++.+|||+|||+|..+..+|... +..+|++||+|+.++..+.++++.. .||++++.|+.+.........+||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 4568999999999999999999875 6789999999997766666665543 579999999876542111236899999
Q ss_pred EeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecC-CC-CCceEEEEEE
Q 021911 219 SDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLE-PF-ERDHACVVGG 296 (305)
Q Consensus 219 ~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~-p~-~~~~~~vv~~ 296 (305)
+.... +...++. .+.++|||||+|++.. +. ............++..||++.++..+. |. .....+++..
T Consensus 157 s~a~~-~~~~ll~-~~~~~LkpgG~l~~~~---g~----~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~ 227 (249)
T 3g89_A 157 ARAVA-PLCVLSE-LLLPFLEVGGAAVAMK---GP----RVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLE 227 (249)
T ss_dssp EESSC-CHHHHHH-HHGGGEEEEEEEEEEE---CS----CCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred ECCcC-CHHHHHH-HHHHHcCCCeEEEEEe---CC----CcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEE
Confidence 98654 3355665 8999999999999875 11 111111222355667799988876552 32 2334444444
Q ss_pred E
Q 021911 297 Y 297 (305)
Q Consensus 297 ~ 297 (305)
+
T Consensus 228 k 228 (249)
T 3g89_A 228 K 228 (249)
T ss_dssp E
T ss_pred e
Confidence 4
No 39
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=5e-14 Score=124.70 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=86.9
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
+.++.+|||+|||+|..+.++|+.+.+.++|++||+|+.++..+.+.++.. ++|.+++.|+.+..+......+||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 456799999999999999999998865789999999997766666655543 47999999987643221113489999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++|.+.+.....+. ++.++|||||+|++..
T Consensus 141 ~~d~~~~~~~~~l~-~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 141 FIDADKPNNPHYLR-WALRYSRPGTLIIGDN 170 (248)
T ss_dssp EECSCGGGHHHHHH-HHHHTCCTTCEEEEEC
T ss_pred EECCchHHHHHHHH-HHHHhcCCCeEEEEeC
Confidence 99999888888887 9999999999999875
No 40
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.57 E-value=4.8e-14 Score=121.24 Aligned_cols=123 Identities=11% Similarity=0.045 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C-CeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T-NVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~-nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+|+. ..+|+++|+|+.+++.+.+.++.. + ++.+++.|+.+.... ...||+
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~---~~~~D~ 125 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD---LPLPEA 125 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT---SCCCSE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc---CCCCCE
Confidence 5788999999999999999999987 468999999997766666655543 4 899999999874322 357999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
|+++... ++. ++. ++.++|||||+|++++. . ..-+....+.+++.+|++.+.
T Consensus 126 v~~~~~~-~~~-~l~-~~~~~LkpgG~lv~~~~--~-------~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 126 VFIGGGG-SQA-LYD-RLWEWLAPGTRIVANAV--T-------LESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp EEECSCC-CHH-HHH-HHHHHSCTTCEEEEEEC--S-------HHHHHHHHHHHHHHCSEEEEE
T ss_pred EEECCcc-cHH-HHH-HHHHhcCCCcEEEEEec--C-------cccHHHHHHHHHhCCCcEEEE
Confidence 9998754 344 666 99999999999999871 1 122234456677778877664
No 41
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.57 E-value=2e-14 Score=123.45 Aligned_cols=137 Identities=14% Similarity=0.075 Sum_probs=91.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc--------------CCCeEEEEccCCCCc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK--------------RTNVIPIIEDARHPA 205 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~--------------~~nI~~~~~D~~~~~ 205 (305)
.+.++.+|||+|||+|..+..||+. + .+|++||+|+.+++.+.+.+.. ..+|.++++|+.+.+
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 4678899999999999999999987 2 4899999999666665555432 258999999998875
Q ss_pred ccccCCCcEeEEEEeCC----C-hhHHHHHHHHHhccCCCCcEEEEEEcccccC-CCCchhhhHHHHHHHH-HHCCCcEe
Q 021911 206 KYRMLVGMVDVIFSDVA----Q-PDQARILALNASYFLKAGGHFVISIKANCID-STVPAEAVFQSEVKKL-QQDQFKPF 278 (305)
Q Consensus 206 ~~~~~~~~fD~V~~d~~----~-~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~-~~~~~~~v~~~~~~~l-~~~Gf~~~ 278 (305)
... .++||+|++... . ++....+. +++++|||||++++.+...... ...++..+-.+++..+ .+ ||+++
T Consensus 96 ~~~--~~~fD~v~~~~~l~~l~~~~~~~~l~-~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 96 ARD--IGHCAAFYDRAAMIALPADMRERYVQ-HLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp HHH--HHSEEEEEEESCGGGSCHHHHHHHHH-HHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEE
T ss_pred ccc--CCCEEEEEECcchhhCCHHHHHHHHH-HHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEE
Confidence 320 158999998554 2 23444565 9999999999955554211100 1111122223444444 44 89876
Q ss_pred EEeec
Q 021911 279 EQVTL 283 (305)
Q Consensus 279 e~~~l 283 (305)
.....
T Consensus 172 ~~~~~ 176 (203)
T 1pjz_A 172 KVGGQ 176 (203)
T ss_dssp EEEES
T ss_pred Eeccc
Confidence 65443
No 42
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.57 E-value=2.3e-14 Score=123.45 Aligned_cols=149 Identities=17% Similarity=0.131 Sum_probs=104.1
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-CCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-VGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-~~~fD~V~~ 219 (305)
..++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++.++.+++.|+.+....... ..+||+|++
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 122 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDR----TLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICA 122 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCH----HHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEE
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCH----HHHHHHHHhcccccchhhHHhhcccccccCCCccEEEE
Confidence 456699999999999999999987 34899999999 7777777777888999887665222112 346999999
Q ss_pred eCC--ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCC-------------------ch--hh-hHHHHHHHHHHCCC
Q 021911 220 DVA--QPDQARILALNASYFLKAGGHFVISIKANCIDSTV-------------------PA--EA-VFQSEVKKLQQDQF 275 (305)
Q Consensus 220 d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~-------------------~~--~~-v~~~~~~~l~~~Gf 275 (305)
... .++...++. ++.++|||||+|++++......... .. .. -..+..+.|+++||
T Consensus 123 ~~~l~~~~~~~~l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 123 NFALLHQDIIELLS-AMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp ESCCCSSCCHHHHH-HHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTE
T ss_pred CchhhhhhHHHHHH-HHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCC
Confidence 765 456667777 9999999999999998432211100 00 00 12334567799999
Q ss_pred cEeEEeecCCCCC---ceEEEEEEE
Q 021911 276 KPFEQVTLEPFER---DHACVVGGY 297 (305)
Q Consensus 276 ~~~e~~~l~p~~~---~~~~vv~~~ 297 (305)
+++++....+-+. ...++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 202 RLVSLQEPQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp EEEEEECCCCTTCSSCSCEEEEEEE
T ss_pred eEEEEecCCCCCCCCceeEEEEeec
Confidence 9998776433222 255666654
No 43
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.57 E-value=5.1e-14 Score=126.39 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=101.2
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEc
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIE 199 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~ 199 (305)
.|....++..++..+. .++.+|||+|||+|.++..++..+ +..+|+++|+|+.++..+.++++.. +++.+++.
T Consensus 92 r~~te~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~ 166 (276)
T 2b3t_A 92 RPDTECLVEQALARLP----EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS 166 (276)
T ss_dssp CTTHHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC
T ss_pred CchHHHHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 4556677777765332 567899999999999999999876 5679999999996666655555432 47999999
Q ss_pred cCCCCcccccCCCcEeEEEEeCCC----------------------------hhHHHHHHHHHhccCCCCcEEEEEEccc
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVAQ----------------------------PDQARILALNASYFLKAGGHFVISIKAN 251 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~~----------------------------~~~~~~l~~~a~~~LkpGG~lv~s~~~~ 251 (305)
|+.+... ..+||+|++++|. .....++. ++.++|||||+|++.+..
T Consensus 167 d~~~~~~----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~-~~~~~LkpgG~l~~~~~~- 240 (276)
T 2b3t_A 167 DWFSALA----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIE-QSRNALVSGGFLLLEHGW- 240 (276)
T ss_dssp STTGGGT----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHH-HHGGGEEEEEEEEEECCS-
T ss_pred chhhhcc----cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHH-HHHHhcCCCCEEEEEECc-
Confidence 9876431 4689999999873 12345555 899999999999998621
Q ss_pred ccCCCCchhhhHHHHHHHHHHCCCcEeEEe
Q 021911 252 CIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 252 ~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~ 281 (305)
.... ...+.+++.||+.++..
T Consensus 241 -----~~~~----~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 241 -----QQGE----AVRQAFILAGYHDVETC 261 (276)
T ss_dssp -----SCHH----HHHHHHHHTTCTTCCEE
T ss_pred -----hHHH----HHHHHHHHCCCcEEEEE
Confidence 1111 22355678899876543
No 44
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.57 E-value=1.5e-14 Score=123.41 Aligned_cols=155 Identities=14% Similarity=0.151 Sum_probs=101.9
Q ss_pred hhhHHHHHHHccccccC-CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCC
Q 021911 124 FRSKLAAAVLGGVDNIW-IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDAR 202 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~-~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~ 202 (305)
|++..+-.+++.++++. ++++.+|||||||+|.++..+++. .++|++||+++. ...+++.+++.|++
T Consensus 5 yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~---------~~~~~v~~~~~D~~ 72 (191)
T 3dou_A 5 LRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM---------EEIAGVRFIRCDIF 72 (191)
T ss_dssp TTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC---------CCCTTCEEEECCTT
T ss_pred CCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc---------ccCCCeEEEEcccc
Confidence 35666666665555443 578899999999999999999987 469999999982 12368999999998
Q ss_pred CCcccc----cCC----CcEeEEEEeCCCh--------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh
Q 021911 203 HPAKYR----MLV----GMVDVIFSDVAQP--------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAE 260 (305)
Q Consensus 203 ~~~~~~----~~~----~~fD~V~~d~~~~--------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~ 260 (305)
+..... ... ++||+|++|++.. .+..++. .+.++|||||.|++.+.. .. .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~-~a~~~LkpGG~lv~k~~~-----~~-~- 144 (191)
T 3dou_A 73 KETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVME-IAVRYLRNGGNVLLKQFQ-----GD-M- 144 (191)
T ss_dssp SSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEEEC-----ST-H-
T ss_pred CHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHH-HHHHHccCCCEEEEEEcC-----CC-C-
Confidence 764211 011 4899999998621 1334555 789999999999988721 11 1
Q ss_pred hhHHHHHHHHHHCCCcEeEEeecCC--CCCceEEEEEEEcCCC
Q 021911 261 AVFQSEVKKLQQDQFKPFEQVTLEP--FERDHACVVGGYRMPK 301 (305)
Q Consensus 261 ~v~~~~~~~l~~~Gf~~~e~~~l~p--~~~~~~~vv~~~~~~~ 301 (305)
+......|+. .|+.++...-.. -+....++||+..+..
T Consensus 145 --~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~v~~~~~~~ 184 (191)
T 3dou_A 145 --TNDFIAIWRK-NFSSYKISKPPASRGSSSEIYIMFFGFKAE 184 (191)
T ss_dssp --HHHHHHHHGG-GEEEEEEECC------CCEEEEEEEEECCC
T ss_pred --HHHHHHHHHH-hcCEEEEECCCCccCCCceEEEEEeeeccc
Confidence 1122344443 366555432111 2356777888776653
No 45
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.56 E-value=9.7e-14 Score=122.36 Aligned_cols=103 Identities=18% Similarity=0.124 Sum_probs=80.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
...++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+.+.+. ..++.+++.|+...+ ....+||+|++
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~---~~~~~fD~v~~ 114 (253)
T 3g5l_A 41 PDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDIA---IEPDAYNVVLS 114 (253)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGCC---CCTTCEEEEEE
T ss_pred hccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhCC---CCCCCeEEEEE
Confidence 34578999999999999999999872 2389999999944443333332 368999999997654 23579999999
Q ss_pred eCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 220 DVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 220 d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
... .++...++. ++.++|||||+|++++.
T Consensus 115 ~~~l~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 115 SLALHYIASFDDICK-KVYINLKSSGSFIFSVE 146 (253)
T ss_dssp ESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred chhhhhhhhHHHHHH-HHHHHcCCCcEEEEEeC
Confidence 776 456777787 99999999999999863
No 46
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.56 E-value=2.6e-14 Score=123.67 Aligned_cols=127 Identities=15% Similarity=0.161 Sum_probs=95.4
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.++.+|||||||+|.++..+|... +..+|++||+|+.++..+.+.++.. +||.+++.|+...... ....+||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~-~~~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDV-FEPGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHH-CCTTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh-cCcCCcCEEEE
Confidence 467899999999999999999985 6679999999997776666665544 6899999999875321 23568999999
Q ss_pred eCCChh-----------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 220 DVAQPD-----------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 220 d~~~~~-----------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
+.+.|. +..++. ++.++|||||.|++++. ....+....+.+.+.+|+..+.
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~-~~~~~LkpgG~l~~~td---------~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLK-KYEEVMGKGGSIHFKTD---------NRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHH-HHHHHHTTSCEEEEEES---------CHHHHHHHHHHHHHHTCEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHH-HHHHHcCCCCEEEEEeC---------CHHHHHHHHHHHHHCCCccccc
Confidence 877542 355666 99999999999999871 1223333356666778876654
No 47
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.56 E-value=5.8e-14 Score=123.51 Aligned_cols=147 Identities=10% Similarity=0.007 Sum_probs=102.1
Q ss_pred cCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 139 IWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
+...++.+|||+|||+|.++..+++.. ..+|+++|+|+.++..+.+.+....++.+++.|+...+. ...+||+|+
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v~ 163 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATL---PPNTYDLIV 163 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCC---CSSCEEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCC---CCCCeEEEE
Confidence 345678999999999999999999875 357999999995555554444433679999999876542 346899999
Q ss_pred EeCC---C--hhHHHHHHHHHhccCCCCcEEEEEEcccccC-----CCCchhhh-HHHHHHHHHHCCCcEeEEeecCCCC
Q 021911 219 SDVA---Q--PDQARILALNASYFLKAGGHFVISIKANCID-----STVPAEAV-FQSEVKKLQQDQFKPFEQVTLEPFE 287 (305)
Q Consensus 219 ~d~~---~--~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~-----~~~~~~~v-~~~~~~~l~~~Gf~~~e~~~l~p~~ 287 (305)
+... . .+...++. ++.++|||||+|++++...... ........ .....+.|+++||++++......+.
T Consensus 164 ~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~ 242 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFK-HCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQEEWP 242 (254)
T ss_dssp EESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEECTTCC
T ss_pred EcchhhhCCHHHHHHHHH-HHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeecCCCC
Confidence 9665 2 34566676 9999999999999988311100 00000001 1223456688999999988776665
Q ss_pred CceE
Q 021911 288 RDHA 291 (305)
Q Consensus 288 ~~~~ 291 (305)
...+
T Consensus 243 ~~~~ 246 (254)
T 1xtp_A 243 TDLF 246 (254)
T ss_dssp TTSC
T ss_pred chhh
Confidence 5433
No 48
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.56 E-value=1.3e-13 Score=124.29 Aligned_cols=159 Identities=14% Similarity=0.028 Sum_probs=106.7
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEE
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPI 197 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~ 197 (305)
|++..+.--..+.. ..+++++|||++||+|.+++++|.. ...+|+|+|+|+.+++.+.++++.+ .+|+++
T Consensus 108 f~~~~~~er~ri~~-----~~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~ 180 (278)
T 3k6r_A 108 FSPANVKERVRMAK-----VAKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY 180 (278)
T ss_dssp CCGGGHHHHHHHHH-----HCCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred EcCCcHHHHHHHHH-----hcCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 55544444444443 3678999999999999999999987 4568999999998888888887766 569999
Q ss_pred EccCCCCcccccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcE
Q 021911 198 IEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKP 277 (305)
Q Consensus 198 ~~D~~~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~ 277 (305)
+.|++++.. ...||.|++++|... .+.+. .+.++||+||+|.+......... ....+....+..++.|+++
T Consensus 181 ~~D~~~~~~----~~~~D~Vi~~~p~~~-~~~l~-~a~~~lk~gG~ih~~~~~~e~~~---~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 181 NMDNRDFPG----ENIADRILMGYVVRT-HEFIP-KALSIAKDGAIIHYHNTVPEKLM---PREPFETFKRITKEYGYDV 251 (278)
T ss_dssp CSCTTTCCC----CSCEEEEEECCCSSG-GGGHH-HHHHHEEEEEEEEEEEEEEGGGT---TTTTHHHHHHHHHHTTCEE
T ss_pred eCcHHHhcc----ccCCCEEEECCCCcH-HHHHH-HHHHHcCCCCEEEEEeeeccccc---chhHHHHHHHHHHHcCCcE
Confidence 999988753 368999999987433 23454 78889999999977542111111 1111122223346778875
Q ss_pred eE-----EeecCCCCCceEEEEEE
Q 021911 278 FE-----QVTLEPFERDHACVVGG 296 (305)
Q Consensus 278 ~e-----~~~l~p~~~~~~~vv~~ 296 (305)
.. +..+.|. ..|+++-.+
T Consensus 252 ~~~~~~~Vk~yaP~-~~hvv~D~~ 274 (278)
T 3k6r_A 252 EKLNELKIKRYAPG-VWHVVLDLR 274 (278)
T ss_dssp EEEEEEEEEEETTT-EEEEEEEEE
T ss_pred EEEEEEEEEeECcC-ccEEEEEEE
Confidence 42 2234554 345555443
No 49
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.56 E-value=2.6e-14 Score=127.48 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=101.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----------------------------
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---------------------------- 191 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---------------------------- 191 (305)
...++.+|||||||+|.++..++.. ...+|+++|+|+.+++.+.+.+++.
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 3567889999999999887776654 2237999999997766655544322
Q ss_pred ---CCeE-EEEccCCCCcccc-cCCCcEeEEEEeCC------C-hhHHHHHHHHHhccCCCCcEEEEEEcccccC---CC
Q 021911 192 ---TNVI-PIIEDARHPAKYR-MLVGMVDVIFSDVA------Q-PDQARILALNASYFLKAGGHFVISIKANCID---ST 256 (305)
Q Consensus 192 ---~nI~-~~~~D~~~~~~~~-~~~~~fD~V~~d~~------~-~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~---~~ 256 (305)
.+|. ++++|+....+.. ...++||+|++... . ++...++. +++++|||||+|++++...... ..
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~-~i~r~LKPGG~li~~~~~~~~~~~~g~ 208 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALC-NLASLLKPGGHLVTTVTLRLPSYMVGK 208 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHH-HHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHH-HHHHHcCCCcEEEEEEeecCccceeCC
Confidence 1244 8889998753321 12468999999754 1 34556676 9999999999999997321100 00
Q ss_pred C-chh-hhHH-HHHHHHHHCCCcEeEEeecC-CC------CCceEEEEEEEcCC
Q 021911 257 V-PAE-AVFQ-SEVKKLQQDQFKPFEQVTLE-PF------ERDHACVVGGYRMP 300 (305)
Q Consensus 257 ~-~~~-~v~~-~~~~~l~~~Gf~~~e~~~l~-p~------~~~~~~vv~~~~~~ 300 (305)
. ... ..-. ...+.|+++||++++..... .+ ....++++++|.+.
T Consensus 209 ~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 262 (263)
T 2a14_A 209 REFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKPG 262 (263)
T ss_dssp EEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC-
T ss_pred eEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecCC
Confidence 0 000 0112 22466788999998876542 11 12456788888654
No 50
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.56 E-value=6.8e-14 Score=127.71 Aligned_cols=138 Identities=15% Similarity=0.158 Sum_probs=100.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
+.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.+.+.++.. .++.+++.|+.+.+ ...++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP---FDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---CCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC---CCCCCEeEE
Confidence 6788999999999999999999986 358999999997666666555544 47999999998764 235799999
Q ss_pred EEeCC--ChhHHHHHHHHHhccCCCCcEEEEEEcccccCC-CCchhhh------------HHHHHHHHHHCCCcEeEEee
Q 021911 218 FSDVA--QPDQARILALNASYFLKAGGHFVISIKANCIDS-TVPAEAV------------FQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 218 ~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~-~~~~~~v------------~~~~~~~l~~~Gf~~~e~~~ 282 (305)
++... ..++..++. ++.++|||||+|++++....... ....... ..+..+.|+++||+++++..
T Consensus 190 ~~~~~l~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 190 WNNESTMYVDLHDLFS-EHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp EEESCGGGSCHHHHHH-HHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred EECCchhhCCHHHHHH-HHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 99655 335677777 99999999999999873221111 1111111 11224566889999988876
Q ss_pred cC
Q 021911 283 LE 284 (305)
Q Consensus 283 l~ 284 (305)
+.
T Consensus 269 ~~ 270 (312)
T 3vc1_A 269 LT 270 (312)
T ss_dssp CH
T ss_pred CC
Confidence 54
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.56 E-value=2.6e-14 Score=122.63 Aligned_cols=151 Identities=17% Similarity=0.109 Sum_probs=101.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.+.++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++.++.+++.|+...+ ...+||+|++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~----~~~~~a~~~~~~~~~~~d~~~~~----~~~~fD~v~~ 108 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSP----ELAAEASRRLGRPVRTMLFHQLD----AIDAYDAVWA 108 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCH----HHHHHHHHHHTSCCEECCGGGCC----CCSCEEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCH----HHHHHHHHhcCCceEEeeeccCC----CCCcEEEEEe
Confidence 4567899999999999999999987 34899999999 55555555446888889987765 3579999999
Q ss_pred eCC---Ch--hHHHHHHHHHhccCCCCcEEEEEEcccccCCCC---chh-h-hHHHHHHHHHHCC-CcEeEEeecCC--C
Q 021911 220 DVA---QP--DQARILALNASYFLKAGGHFVISIKANCIDSTV---PAE-A-VFQSEVKKLQQDQ-FKPFEQVTLEP--F 286 (305)
Q Consensus 220 d~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~---~~~-~-v~~~~~~~l~~~G-f~~~e~~~l~p--~ 286 (305)
... .+ +...++. ++.++|||||+|++++......... ... . -.....+.++++| |++++...... +
T Consensus 109 ~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~ 187 (211)
T 3e23_A 109 HACLLHVPRDELADVLK-LIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGF 187 (211)
T ss_dssp CSCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECT
T ss_pred cCchhhcCHHHHHHHHH-HHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCC
Confidence 765 22 5566776 9999999999999987432211000 000 0 1122345668899 99988764332 3
Q ss_pred CC--ceEEEEEEEcCCCC
Q 021911 287 ER--DHACVVGGYRMPKK 302 (305)
Q Consensus 287 ~~--~~~~vv~~~~~~~~ 302 (305)
.+ .+.+++...+.+..
T Consensus 188 ~~~~~~wl~~~~~~~~~~ 205 (211)
T 3e23_A 188 DQELAQFLHVSVRKPELE 205 (211)
T ss_dssp TSCEEEEEEEEEECCCC-
T ss_pred CCCCceEEEEEEecCccc
Confidence 32 33444444444433
No 52
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=1.6e-14 Score=128.95 Aligned_cols=115 Identities=20% Similarity=0.214 Sum_probs=88.4
Q ss_pred eeecCc-hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEE
Q 021911 118 YRIWNP-FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIP 196 (305)
Q Consensus 118 ~~~~~~-~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~ 196 (305)
|..+.| |...+...|.. ......+|||||||+|.++..|++.. .+|++||+|+ .|++.+++.++|.+
T Consensus 18 Y~~~Rp~yp~~l~~~l~~-----~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~----~ml~~a~~~~~v~~ 85 (257)
T 4hg2_A 18 YRAFRPRYPRALFRWLGE-----VAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGE----AQIRQALRHPRVTY 85 (257)
T ss_dssp --CCCCCCCHHHHHHHHH-----HSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCH----HHHHTCCCCTTEEE
T ss_pred HHHHCCCcHHHHHHHHHH-----hcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcH----HhhhhhhhcCCcee
Confidence 444433 33455555543 23446799999999999999999874 4899999999 78888887799999
Q ss_pred EEccCCCCcccccCCCcEeEEEEeCC--ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 197 IIEDARHPAKYRMLVGMVDVIFSDVA--QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 197 ~~~D~~~~~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++.|+.+.+ ..+++||+|++..+ ..+..+.+. +++++|||||+|++..
T Consensus 86 ~~~~~e~~~---~~~~sfD~v~~~~~~h~~~~~~~~~-e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 86 AVAPAEDTG---LPPASVDVAIAAQAMHWFDLDRFWA-ELRRVARPGAVFAAVT 135 (257)
T ss_dssp EECCTTCCC---CCSSCEEEEEECSCCTTCCHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred ehhhhhhhc---ccCCcccEEEEeeehhHhhHHHHHH-HHHHHcCCCCEEEEEE
Confidence 999998765 23679999999665 345566676 9999999999999987
No 53
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.56 E-value=1.1e-13 Score=118.62 Aligned_cols=98 Identities=19% Similarity=0.103 Sum_probs=79.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.+++. +++.+++.|+.+.. ...+||+|
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~----~~~~~a~~~~~~~~~~~~~d~~~~~----~~~~~D~v 111 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSA----EMIAEAGRHGLDNVEFRQQDLFDWT----PDRQWDAV 111 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCH----HHHHHHGGGCCTTEEEEECCTTSCC----CSSCEEEE
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCH----HHHHHHHhcCCCCeEEEecccccCC----CCCceeEE
Confidence 3667789999999999999999988 35899999999 555555543 68999999998762 35799999
Q ss_pred EEeCC---Chh--HHHHHHHHHhccCCCCcEEEEEEc
Q 021911 218 FSDVA---QPD--QARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 218 ~~d~~---~~~--~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
++... .++ ...++. ++.++|||||.|++++.
T Consensus 112 ~~~~~l~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWE-SVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred EEechhhcCCHHHHHHHHH-HHHHHcCCCeEEEEEeC
Confidence 99765 223 366666 99999999999999874
No 54
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.55 E-value=1e-13 Score=118.39 Aligned_cols=137 Identities=15% Similarity=0.174 Sum_probs=97.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
++.+|||+|||+|..+..++... +..+|+++|+|+.++..+.+.++.. +++.+++.|+.+..+ ..+||+|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS----EPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC----CSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc----cCCcCEEEEe
Confidence 47899999999999999999875 5679999999997666666555544 469999999987642 3689999986
Q ss_pred CCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCCCCCceEEEEEEEc
Q 021911 221 VAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEPFERDHACVVGGYR 298 (305)
Q Consensus 221 ~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p~~~~~~~vv~~~~ 298 (305)
.. .+...++. ++.++|||||+|++.... .. .+++..+.+ +|++++.. .+........+++.+++
T Consensus 140 ~~-~~~~~~l~-~~~~~L~~gG~l~~~~~~------~~-----~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 140 AF-ASLNDMVS-WCHHLPGEQGRFYALKGQ------MP-----EDEIALLPE-EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp CS-SSHHHHHH-HHTTSEEEEEEEEEEESS------CC-----HHHHHTSCT-TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred cc-CCHHHHHH-HHHHhcCCCcEEEEEeCC------Cc-----hHHHHHHhc-CCceeeeeeeccCCCCCceEEEEEEec
Confidence 54 44556776 999999999999998611 11 122333333 88877654 33334455566666554
No 55
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.55 E-value=4.3e-14 Score=124.91 Aligned_cols=127 Identities=26% Similarity=0.350 Sum_probs=97.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CC-eEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TN-VIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~n-I~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++.++++.+++..+|+++|+|+.+++.+.+.++.. ++ +.+++.|+.+.. ...+||+
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~D~ 165 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI----EEENVDH 165 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC----CCCSEEE
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc----CCCCcCE
Confidence 5788999999999999999999999877889999999996666665555432 34 999999997542 2468999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCC--CcEeEEee
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQ--FKPFEQVT 282 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~G--f~~~e~~~ 282 (305)
|+++++.+. .++. ++.++|||||+|++.++ + ........+.+++.+ |..++...
T Consensus 166 v~~~~~~~~--~~l~-~~~~~L~~gG~l~~~~~--~-------~~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 166 VILDLPQPE--RVVE-HAAKALKPGGFFVAYTP--C-------SNQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp EEECSSCGG--GGHH-HHHHHEEEEEEEEEEES--S-------HHHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred EEECCCCHH--HHHH-HHHHHcCCCCEEEEEEC--C-------HHHHHHHHHHHHHcCCCccccEEEE
Confidence 999988664 4465 88999999999999862 1 112234456778888 88776654
No 56
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.55 E-value=2.6e-14 Score=120.87 Aligned_cols=124 Identities=19% Similarity=0.113 Sum_probs=90.2
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEc
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIE 199 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~ 199 (305)
.|....+...++..|......++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.+.+.++.. +++++++.
T Consensus 23 rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 100 (189)
T 3p9n_A 23 RPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRG 100 (189)
T ss_dssp ---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEES
T ss_pred ccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 3445566666655554333357899999999999999988875 4568999999996666665555443 58999999
Q ss_pred cCCCCcccccCCCcEeEEEEeCCC----hhHHHHHHHHHhc--cCCCCcEEEEEEc
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVAQ----PDQARILALNASY--FLKAGGHFVISIK 249 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~~----~~~~~~l~~~a~~--~LkpGG~lv~s~~ 249 (305)
|+.+.... ....+||+|++|+|. ++..+++. .+.+ +|||||.|++.+.
T Consensus 101 d~~~~~~~-~~~~~fD~i~~~~p~~~~~~~~~~~l~-~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 101 AVAAVVAA-GTTSPVDLVLADPPYNVDSADVDAILA-ALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CHHHHHHH-CCSSCCSEEEECCCTTSCHHHHHHHHH-HHHHSSSCCTTCEEEEEEE
T ss_pred cHHHHHhh-ccCCCccEEEECCCCCcchhhHHHHHH-HHHhcCccCCCeEEEEEec
Confidence 99775431 124789999999883 34556665 7777 9999999999873
No 57
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.54 E-value=3.7e-14 Score=125.91 Aligned_cols=96 Identities=18% Similarity=0.249 Sum_probs=76.7
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
..++.+|||+|||+|.++..+++.. .+|+++|+|+ .+++.++++ +++.+++.|+...+. ..+||+|++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~----~~~~~a~~~~~~~~~~~~d~~~~~~----~~~fD~v~~ 116 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSA----DMLAIARRRNPDAVLHHGDMRDFSL----GRRFSAVTC 116 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCH----HHHHHHHHHCTTSEEEECCTTTCCC----SCCEEEEEE
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCH----HHHHHHHhhCCCCEEEECChHHCCc----cCCcCEEEE
Confidence 3467899999999999999999872 4899999999 555555554 589999999987643 579999999
Q ss_pred eC-C---C---hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DV-A---Q---PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~-~---~---~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.. . . .+...++. ++.++|||||+|++++
T Consensus 117 ~~~~l~~~~~~~~~~~~l~-~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALE-RFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHH-HHHHTEEEEEEEEECC
T ss_pred cCchhhhcCCHHHHHHHHH-HHHHhcCCCcEEEEEe
Confidence 75 3 2 24445566 9999999999999964
No 58
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.54 E-value=1.6e-13 Score=118.26 Aligned_cols=145 Identities=18% Similarity=0.161 Sum_probs=100.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
..++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++ .++.+++.|+.+.+. ..+||+|+
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~d~~~~~~----~~~fD~v~ 111 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSR----EMRMIAKEKLPKEFSITEGDFLSFEV----PTSIDTIV 111 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCH----HHHHHHHHHSCTTCCEESCCSSSCCC----CSCCSEEE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCH----HHHHHHHHhCCCceEEEeCChhhcCC----CCCeEEEE
Confidence 457899999999999999999987 35899999999 445555443 489999999987642 27999999
Q ss_pred EeCC---ChhH--HHHHHHHHhccCCCCcEEEEEEcccccCCCCchh----------------h-------hHHHHHHHH
Q 021911 219 SDVA---QPDQ--ARILALNASYFLKAGGHFVISIKANCIDSTVPAE----------------A-------VFQSEVKKL 270 (305)
Q Consensus 219 ~d~~---~~~~--~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~----------------~-------v~~~~~~~l 270 (305)
+... .++. ..++. ++.++|||||.|++++.... ...... . -.....+.|
T Consensus 112 ~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 188 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIA-KYSQLLNKGGKIVFADTIFA--DQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF 188 (220)
T ss_dssp EESCGGGSCHHHHHHHHH-HHHHHSCTTCEEEEEEECBS--SHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH
T ss_pred ECcchhcCChHHHHHHHH-HHHHhcCCCCEEEEEecccc--ChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH
Confidence 9766 2333 33666 99999999999999873211 100000 0 012224566
Q ss_pred HHCCCcEeEEeecCCCCCceEEEEEEEcCCCCC
Q 021911 271 QQDQFKPFEQVTLEPFERDHACVVGGYRMPKKQ 303 (305)
Q Consensus 271 ~~~Gf~~~e~~~l~p~~~~~~~vv~~~~~~~~~ 303 (305)
+++||+++... ..+| ++++.+.++..+.+
T Consensus 189 ~~aGf~v~~~~-~~~~---~w~~~~~~~~~~~~ 217 (220)
T 3hnr_A 189 ENNGFHVTFTR-LNHF---VWVMEATKQLEHHH 217 (220)
T ss_dssp HHTTEEEEEEE-CSSS---EEEEEEEECSCCC-
T ss_pred HHCCCEEEEee-ccce---EEEEeehhhhhhhc
Confidence 89999876543 3444 77777777665543
No 59
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.54 E-value=2e-13 Score=121.55 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=100.6
Q ss_pred ccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcE
Q 021911 138 NIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
.+.+.++.+|||+|||+|.++..+++.. ..+|+++|+|+..+..+.+.+... .++.+++.|+.+.+. ...+|
T Consensus 56 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~f 130 (273)
T 3bus_A 56 LLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF---EDASF 130 (273)
T ss_dssp HSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---CTTCE
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC---CCCCc
Confidence 3356788999999999999999999875 469999999996666555555443 479999999987542 24689
Q ss_pred eEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh---------------HHHHHHHHHHCCCc
Q 021911 215 DVIFSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV---------------FQSEVKKLQQDQFK 276 (305)
Q Consensus 215 D~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v---------------~~~~~~~l~~~Gf~ 276 (305)
|+|++... .++...++. ++.++|||||+|++++.............. .....+.++++||+
T Consensus 131 D~v~~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 209 (273)
T 3bus_A 131 DAVWALESLHHMPDRGRALR-EMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELV 209 (273)
T ss_dssp EEEEEESCTTTSSCHHHHHH-HHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCE
T ss_pred cEEEEechhhhCCCHHHHHH-HHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCe
Confidence 99998665 456777777 999999999999998732111110000000 01224566889999
Q ss_pred EeEEeecC
Q 021911 277 PFEQVTLE 284 (305)
Q Consensus 277 ~~e~~~l~ 284 (305)
+++...+.
T Consensus 210 ~~~~~~~~ 217 (273)
T 3bus_A 210 VTSTVDIS 217 (273)
T ss_dssp EEEEEECH
T ss_pred EEEEEECc
Confidence 98877653
No 60
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.54 E-value=1.9e-13 Score=122.65 Aligned_cols=127 Identities=26% Similarity=0.282 Sum_probs=97.8
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++.+++..+|+++|+|+.+++.+.+.++.. +++.+++.|+.+.. ...+||+
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~D~ 184 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF----DEKDVDA 184 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC----SCCSEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc----cCCccCE
Confidence 5778899999999999999999998777789999999997766666655543 47999999987652 2358999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEee
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~ 282 (305)
|+++++.+. .++. ++.++|||+|.|++.+. + .....+..+.|++.||..++...
T Consensus 185 V~~~~~~~~--~~l~-~~~~~L~pgG~l~~~~~--~-------~~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 185 LFLDVPDPW--NYID-KCWEALKGGGRFATVCP--T-------TNQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp EEECCSCGG--GTHH-HHHHHEEEEEEEEEEES--S-------HHHHHHHHHHHHHSSEEEEEEEC
T ss_pred EEECCcCHH--HHHH-HHHHHcCCCCEEEEEeC--C-------HHHHHHHHHHHHHCCCceeEEEE
Confidence 999987664 4565 88899999999999872 2 11223445667778998776543
No 61
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.54 E-value=1.7e-13 Score=122.69 Aligned_cols=127 Identities=25% Similarity=0.275 Sum_probs=96.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-----CCCeEEEEccCCCCcccccCCCcE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-----RTNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-----~~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
.+.++.+|||+|||+|.++.++++.+++..+|+++|+|+.+++.+.+.++. .+++.+++.|+.+... ....|
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~---~~~~~ 172 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL---PDGSV 172 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC---CTTCE
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC---CCCce
Confidence 578899999999999999999999877778999999999777666665543 2589999999876531 24689
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHH-CCCcEeEEe
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ-DQFKPFEQV 281 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~-~Gf~~~e~~ 281 (305)
|+|+++++.+. .++. ++.++|||||+|++++. + . ..+.+.++.|++ .+|...+.+
T Consensus 173 D~v~~~~~~~~--~~l~-~~~~~L~pgG~l~~~~~--~------~-~~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 173 DRAVLDMLAPW--EVLD-AVSRLLVAGGVLMVYVA--T------V-TQLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp EEEEEESSCGG--GGHH-HHHHHEEEEEEEEEEES--S------H-HHHHHHHHHHHHHSSBCCCEEE
T ss_pred eEEEECCcCHH--HHHH-HHHHhCCCCCEEEEEeC--C------H-HHHHHHHHHHHhcCCcCCcEEE
Confidence 99999988654 5566 88999999999999872 2 1 122334455655 677765544
No 62
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.54 E-value=1.7e-13 Score=123.39 Aligned_cols=119 Identities=9% Similarity=0.025 Sum_probs=91.5
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCC
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARH 203 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~ 203 (305)
...+...++..+. .+.++.+|||+|||+|.++..+++.+....+|+++|+|+..+..+.+.+... .++.+++.|+.+
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 6 NDDYVSFLVNTVW--KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE 83 (284)
T ss_dssp CHHHHHHHHHTTS--CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT
T ss_pred chHHHHHHHHHHh--ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 3344444544332 4567899999999999999999998744579999999996655555555444 489999999987
Q ss_pred CcccccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcc
Q 021911 204 PAKYRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 204 ~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
.+. .++||+|++... .++...++. ++.++|||||+|++..+.
T Consensus 84 ~~~----~~~fD~v~~~~~l~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IEL----NDKYDIAICHAFLLHMTTPETMLQ-KMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCC----SSCEEEEEEESCGGGCSSHHHHHH-HHHHTEEEEEEEEEEECC
T ss_pred cCc----CCCeeEEEECChhhcCCCHHHHHH-HHHHHcCCCCEEEEEecc
Confidence 542 469999999776 456677787 999999999999998743
No 63
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.54 E-value=1.2e-13 Score=122.86 Aligned_cols=140 Identities=16% Similarity=0.143 Sum_probs=95.3
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH-------------------cCCCeEEEEccC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK-------------------KRTNVIPIIEDA 201 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~-------------------~~~nI~~~~~D~ 201 (305)
+.++.+|||+|||+|..+..||+. + .+|++||+|+.+++.+.+.+. ...+|.++++|+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~-G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR-G--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT-T--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC-C--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 457899999999999999999987 2 489999999977666554442 125799999999
Q ss_pred CCCcccccCCCcEeEEEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEEcccc-cCCCCchhhhHHHHHHHHHHCCC
Q 021911 202 RHPAKYRMLVGMVDVIFSDVA-----QPDQARILALNASYFLKAGGHFVISIKANC-IDSTVPAEAVFQSEVKKLQQDQF 275 (305)
Q Consensus 202 ~~~~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~-i~~~~~~~~v~~~~~~~l~~~Gf 275 (305)
.+.+.. ..++||+|++... .++....+. ++.++|||||+|++.+.... .....++..+-.+++..+-..+|
T Consensus 143 ~~l~~~--~~~~FD~V~~~~~l~~l~~~~~~~~l~-~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~~f 219 (252)
T 2gb4_A 143 FDLPRA--NIGKFDRIWDRGALVAINPGDHDRYAD-IILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGTKC 219 (252)
T ss_dssp TTGGGG--CCCCEEEEEESSSTTTSCGGGHHHHHH-HHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTTTE
T ss_pred ccCCcc--cCCCEEEEEEhhhhhhCCHHHHHHHHH-HHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhCCe
Confidence 887532 1369999997544 234555666 99999999999976542111 11111122233455555544459
Q ss_pred cEeEEeecCCC
Q 021911 276 KPFEQVTLEPF 286 (305)
Q Consensus 276 ~~~e~~~l~p~ 286 (305)
+++.....+++
T Consensus 220 ~v~~~~~~~~~ 230 (252)
T 2gb4_A 220 SMQCLEEVDAL 230 (252)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEeccccc
Confidence 88877665554
No 64
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.54 E-value=1.3e-13 Score=120.48 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=96.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
++++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++ .++.+++.|+...+. ...+||+|
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v 120 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISE----VMIQKGKERGEGPDLSFIKGDLSSLPF---ENEQFEAI 120 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCH----HHHHHHHTTTCBTTEEEEECBTTBCSS---CTTCEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCH----HHHHHHHhhcccCCceEEEcchhcCCC---CCCCccEE
Confidence 567899999999999999999987 34899999999 566666554 689999999987642 35799999
Q ss_pred EEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhh-----------hH-HHHHHHHHHCCCcEeEEee
Q 021911 218 FSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEA-----------VF-QSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 218 ~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~-----------v~-~~~~~~l~~~Gf~~~e~~~ 282 (305)
++... .++...++. ++.++|||||+|++++............. .. ....+.++++||++++...
T Consensus 121 ~~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 121 MAINSLEWTEEPLRALN-EIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp EEESCTTSSSCHHHHHH-HHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEcChHhhccCHHHHHH-HHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 99665 456677777 99999999999999873221110000000 11 1234566899999988764
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.54 E-value=6.7e-14 Score=120.38 Aligned_cols=149 Identities=15% Similarity=0.206 Sum_probs=100.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
...++.+|||+|||+|.++..+++.. .+|+++|+|+.++..+.+.+....++.+++.|+.+.. ...+||+|++
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~----~~~~fD~v~~ 120 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS----TAELFDLIVV 120 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC----CSCCEEEEEE
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC----CCCCccEEEE
Confidence 45677899999999999999999873 4899999999666665555555568999999998875 2579999999
Q ss_pred eCC-----ChhH-HHHHHHHHhccCCCCcEEEEEEcccc----cCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCc
Q 021911 220 DVA-----QPDQ-ARILALNASYFLKAGGHFVISIKANC----IDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERD 289 (305)
Q Consensus 220 d~~-----~~~~-~~~l~~~a~~~LkpGG~lv~s~~~~~----i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~ 289 (305)
... .++. ..++. ++.++|||||+|++++.... +... .....+..+....+..++.+........
T Consensus 121 ~~~l~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 194 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAID-NMVKMLAPGGHLVFGSARDATCRRWGHV-----AGAETVITILTEALTEVERVQCQGQSAD 194 (216)
T ss_dssp ESCGGGSSSHHHHHHHHH-HHHHTEEEEEEEEEEEECHHHHHHTTCS-----CCHHHHHHHHHHHSEEEEEEEEECSSTT
T ss_pred ccHHHhCCCHHHHHHHHH-HHHHHcCCCCEEEEEecCCCcchhhhhh-----hhHHHHHHHHHhhccceEEEeccCCccc
Confidence 765 2232 35565 99999999999999874221 1111 1112222232233666665555544444
Q ss_pred eEEEEEEEcCCC
Q 021911 290 HACVVGGYRMPK 301 (305)
Q Consensus 290 ~~~vv~~~~~~~ 301 (305)
.-+++..++++.
T Consensus 195 ~d~~l~~~~~~~ 206 (216)
T 3ofk_A 195 EDCLLARFRNPE 206 (216)
T ss_dssp CEEEEEEEECCC
T ss_pred cchhHHHHhCCc
Confidence 445555555543
No 66
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=1.5e-13 Score=122.59 Aligned_cols=146 Identities=14% Similarity=0.077 Sum_probs=101.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc---C---CCeEEEEccCCCCccc----cc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK---R---TNVIPIIEDARHPAKY----RM 209 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~---~---~nI~~~~~D~~~~~~~----~~ 209 (305)
...++.+|||+|||+|.++..++... +..+|++||+++.+++.+.++++. . .++.+++.|+.+.... ..
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhcc
Confidence 45678899999999999999999985 467999999999666666555554 3 2599999999887321 12
Q ss_pred CCCcEeEEEEeCCChh---------------------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHH
Q 021911 210 LVGMVDVIFSDVAQPD---------------------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVK 268 (305)
Q Consensus 210 ~~~~fD~V~~d~~~~~---------------------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~ 268 (305)
...+||+|++|+|... ...++. .+.++|||+|+|++.+.. ..+.+.++
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~----------~~~~~~~~ 180 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIR-TASAIMVSGGQLSLISRP----------QSVAEIIA 180 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHH-HHHHHEEEEEEEEEEECG----------GGHHHHHH
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHH-HHHHHcCCCCEEEEEEcH----------HHHHHHHH
Confidence 3468999999987321 344555 899999999999998721 12233345
Q ss_pred HHHHCCCcEeEEeecCCCCC---ceEEEEEEEc
Q 021911 269 KLQQDQFKPFEQVTLEPFER---DHACVVGGYR 298 (305)
Q Consensus 269 ~l~~~Gf~~~e~~~l~p~~~---~~~~vv~~~~ 298 (305)
.+++. |...++..+.+... ..+++.+++.
T Consensus 181 ~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~k~ 212 (260)
T 2ozv_A 181 ACGSR-FGGLEITLIHPRPGEDAVRMLVTAIKG 212 (260)
T ss_dssp HHTTT-EEEEEEEEEESSTTSCCCEEEEEEEET
T ss_pred HHHhc-CCceEEEEEcCCCCCCceEEEEEEEeC
Confidence 56554 88777766554432 2345555554
No 67
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=5.6e-14 Score=123.14 Aligned_cols=151 Identities=16% Similarity=0.112 Sum_probs=104.9
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCC
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHP 204 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~ 204 (305)
...+...++..+. .++++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++ +.+++.|+.+.
T Consensus 25 ~~~~~~~~~~~l~--~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~----~~~~~a~~~--~~~~~~d~~~~ 93 (240)
T 3dli_A 25 RELVKARLRRYIP--YFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINE----DMIKFCEGK--FNVVKSDAIEY 93 (240)
T ss_dssp HHHHHHHHGGGGG--GTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCH----HHHHHHHTT--SEEECSCHHHH
T ss_pred HHHHHHHHHHHHh--hhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCH----HHHHHHHhh--cceeeccHHHH
Confidence 4445555554444 4567899999999999999999987 24799999999 777777764 88898888664
Q ss_pred cccccCCCcEeEEEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEEccccc---------CCCCchhhhHHHHHHHH
Q 021911 205 AKYRMLVGMVDVIFSDVA-----QPDQARILALNASYFLKAGGHFVISIKANCI---------DSTVPAEAVFQSEVKKL 270 (305)
Q Consensus 205 ~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i---------~~~~~~~~v~~~~~~~l 270 (305)
.. ....++||+|++... .++...++. ++.++|||||+|+++++.... ..............+.+
T Consensus 94 ~~-~~~~~~fD~i~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 171 (240)
T 3dli_A 94 LK-SLPDKYLDGVMISHFVEHLDPERLFELLS-LCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFIL 171 (240)
T ss_dssp HH-TSCTTCBSEEEEESCGGGSCGGGHHHHHH-HHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHH
T ss_pred hh-hcCCCCeeEEEECCchhhCCcHHHHHHHH-HHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHH
Confidence 21 123579999999655 235577777 999999999999998843210 00000000112224566
Q ss_pred HHCCCcEeEEeecCCCCC
Q 021911 271 QQDQFKPFEQVTLEPFER 288 (305)
Q Consensus 271 ~~~Gf~~~e~~~l~p~~~ 288 (305)
+++||++++...+.|+..
T Consensus 172 ~~aGf~~~~~~~~~~~~~ 189 (240)
T 3dli_A 172 EYLGFRDVKIEFFEECEE 189 (240)
T ss_dssp HHHTCEEEEEEEECCCCT
T ss_pred HHCCCeEEEEEEeccCcc
Confidence 889999999888776643
No 68
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.53 E-value=1.3e-13 Score=119.33 Aligned_cols=107 Identities=15% Similarity=0.117 Sum_probs=85.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCccc-ccC-CCcEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKY-RML-VGMVD 215 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~-~~~-~~~fD 215 (305)
..++.+|||+|||+|.++.++++.+.+.++|+++|+++.++..+.+.++.. .+|.+++.|+.+..+. ... ..+||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 456789999999999999999998754689999999997666665555443 3699999998654221 001 15799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+|+++.+.+.....+. ++.++|||||.|++..
T Consensus 136 ~v~~d~~~~~~~~~l~-~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 136 FIFIDADKQNNPAYFE-WALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEEECSCGGGHHHHHH-HHHHTCCTTCEEEEES
T ss_pred EEEEcCCcHHHHHHHH-HHHHhcCCCcEEEEeC
Confidence 9999999888888887 9999999999888864
No 69
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=8.9e-14 Score=119.99 Aligned_cols=138 Identities=14% Similarity=0.191 Sum_probs=96.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC------CCeEEEEccCCCCcccccCCCc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR------TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~------~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
.+.++.+|||+|||+|.++..+++.. +..+|++||+|+.++..+.+.++++ +++.+++.|+.+.+. ....
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~---~~~~ 99 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP---LSGV 99 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS---CCCE
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC---CCCC
Confidence 46788999999999999999999984 5789999999997665555445432 589999999988653 2345
Q ss_pred EeEEEEeCCChh--------HHHHHHHHHhccCCCCcEEEEEEcccccCCC--------CchhhhHHH-HHHHHHHCCCc
Q 021911 214 VDVIFSDVAQPD--------QARILALNASYFLKAGGHFVISIKANCIDST--------VPAEAVFQS-EVKKLQQDQFK 276 (305)
Q Consensus 214 fD~V~~d~~~~~--------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~--------~~~~~v~~~-~~~~l~~~Gf~ 276 (305)
|.|++.++... +..++. ++.++|||||+|+++......... ......+.+ ....+.++||+
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLR-GMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWK 177 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHH-HHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEE
T ss_pred -CEEEEEccchhhhhhhhccHHHHHH-HHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCC
Confidence 88877665433 256666 999999999999997632211110 011112223 23566889999
Q ss_pred EeEEeec
Q 021911 277 PFEQVTL 283 (305)
Q Consensus 277 ~~e~~~l 283 (305)
+.++..+
T Consensus 178 i~~~~~~ 184 (218)
T 3mq2_A 178 LADCRYL 184 (218)
T ss_dssp EEEEEEE
T ss_pred ceeeecc
Confidence 9886544
No 70
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=2.2e-13 Score=125.67 Aligned_cols=105 Identities=26% Similarity=0.244 Sum_probs=83.2
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-------------CCCeEEEEccCCCCcc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-------------RTNVIPIIEDARHPAK 206 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-------------~~nI~~~~~D~~~~~~ 206 (305)
.+.++.+|||+|||+|.++..++..+++.++|+++|+++.+++.+.+.+.. ..+|.+++.|+.+...
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 578899999999999999999999887778999999999777766666553 2589999999987531
Q ss_pred cccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 207 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
. ....+||+|+++++.+.. ++. ++.++|||||+|++..
T Consensus 182 ~-~~~~~fD~V~~~~~~~~~--~l~-~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 182 D-IKSLTFDAVALDMLNPHV--TLP-VFYPHLKHGGVCAVYV 219 (336)
T ss_dssp -------EEEEEECSSSTTT--THH-HHGGGEEEEEEEEEEE
T ss_pred c-cCCCCeeEEEECCCCHHH--HHH-HHHHhcCCCcEEEEEe
Confidence 1 123579999999886654 455 8899999999999886
No 71
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.52 E-value=2.2e-13 Score=120.63 Aligned_cols=102 Identities=18% Similarity=0.220 Sum_probs=82.2
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++.. .+|+++|+|+.++..+.+.++.. +++.+++.|+...+ ...++||+|
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~---~~~~~fD~V 107 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP---FTDERFHIV 107 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC---SCTTCEEEE
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC---CCCCCEEEE
Confidence 46788999999999999999999885 39999999996655555544433 57999999998754 235799999
Q ss_pred EEeCC---ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVA---QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++... .++...++. ++.++|||||+|+++.
T Consensus 108 ~~~~~l~~~~d~~~~l~-~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 108 TCRIAAHHFPNPASFVS-EAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred EEhhhhHhcCCHHHHHH-HHHHHcCCCCEEEEEE
Confidence 99866 467778887 9999999999999975
No 72
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.52 E-value=1.4e-13 Score=115.31 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=98.3
Q ss_pred hHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCC
Q 021911 126 SKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDAR 202 (305)
Q Consensus 126 s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~ 202 (305)
..+...++..+ .+.++.+|||+|||+|.++..++... .+|+++|+|+.+++.+.+.++.. +++.+++.|+.
T Consensus 19 ~~~~~~~~~~~---~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 19 MEVRCLIMCLA---EPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp HHHHHHHHHHH---CCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred HHHHHHHHHhc---CCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 34444444322 57788999999999999999999874 69999999997666665555443 58999999986
Q ss_pred CCcccccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEe
Q 021911 203 HPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPF 278 (305)
Q Consensus 203 ~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~ 278 (305)
+..+. ...||+|+++.+..+...++. ++.++|+|+|++++.+. . ........+.+++.||.+.
T Consensus 93 ~~~~~---~~~~D~v~~~~~~~~~~~~l~-~~~~~l~~gG~l~~~~~--~-------~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 93 EALCK---IPDIDIAVVGGSGGELQEILR-IIKDKLKPGGRIIVTAI--L-------LETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp HHHTT---SCCEEEEEESCCTTCHHHHHH-HHHHTEEEEEEEEEEEC--B-------HHHHHHHHHHHHHTTCCCE
T ss_pred Hhccc---CCCCCEEEECCchHHHHHHHH-HHHHhcCCCcEEEEEec--C-------cchHHHHHHHHHHCCCceE
Confidence 52211 258999999988777777787 99999999999999872 1 1122334566788888543
No 73
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=9.1e-14 Score=124.88 Aligned_cols=102 Identities=22% Similarity=0.225 Sum_probs=85.2
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+|... +.++|+++|+|+.+++.+.++++.+ +|+.+++.|+.+. +. ..+||+|
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~---~~~~D~V 190 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL---KDVADRV 190 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC---TTCEEEE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc---cCCceEE
Confidence 46788999999999999999999985 3569999999998887777777665 5899999999876 32 4689999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++|+|. ...+++. .+.+.|||+|.|+++.
T Consensus 191 i~d~p~-~~~~~l~-~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 191 IMGYVH-KTHKFLD-KTFEFLKDRGVIHYHE 219 (272)
T ss_dssp EECCCS-SGGGGHH-HHHHHEEEEEEEEEEE
T ss_pred EECCcc-cHHHHHH-HHHHHcCCCCEEEEEE
Confidence 999985 4455665 8889999999999885
No 74
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=9.2e-14 Score=123.56 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=101.9
Q ss_pred hHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCc
Q 021911 126 SKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPA 205 (305)
Q Consensus 126 s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~ 205 (305)
..+...++..+ .+.++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++.|+.+++.|+.+.+
T Consensus 20 ~~~~~~l~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~----~~~~~a~~~~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 20 IRIVNAIINLL---NLPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSI----VMRQQAVVHPQVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHH---CCCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCH----HHHHSSCCCTTEEEECCCTTSCC
T ss_pred HHHHHHHHHHh---CCCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCH----HHHHHHHhccCCEEEECchhhCC
Confidence 34555554333 4578899999999999999999973 46999999999 77877777779999999998754
Q ss_pred ccccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh-------------HHHHHHH
Q 021911 206 KYRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV-------------FQSEVKK 269 (305)
Q Consensus 206 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v-------------~~~~~~~ 269 (305)
...++||+|++... .++...++. ++.++|| ||++++.+.............. ...++..
T Consensus 90 ---~~~~~fD~v~~~~~l~~~~~~~~~l~-~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
T 3ege_A 90 ---LPDKSVDGVISILAIHHFSHLEKSFQ-EMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQINL 164 (261)
T ss_dssp ---SCTTCBSEEEEESCGGGCSSHHHHHH-HHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHHH
T ss_pred ---CCCCCEeEEEEcchHhhccCHHHHHH-HHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHHH
Confidence 23579999999776 467778887 9999999 9988887743211110000000 1122337
Q ss_pred HHHCCCcEeEEeec
Q 021911 270 LQQDQFKPFEQVTL 283 (305)
Q Consensus 270 l~~~Gf~~~e~~~l 283 (305)
|+++||+.++...+
T Consensus 165 l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 165 LQENTKRRVEAIPF 178 (261)
T ss_dssp HHHHHCSEEEEEEC
T ss_pred HHHcCCCceeEEEe
Confidence 78899988776543
No 75
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.52 E-value=2.1e-13 Score=119.54 Aligned_cols=102 Identities=22% Similarity=0.201 Sum_probs=82.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++++.+|||+|||+|.++..+++.. .+|+++|+|+.++..+.+.+... +++.+++.|+...+ ....+||+|
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~v 91 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP---FPDDSFDII 91 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC---SCTTCEEEE
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC---CCCCcEEEE
Confidence 68889999999999999999999874 38999999996665555544332 68999999997654 235789999
Q ss_pred EEeCC---ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVA---QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++... .++...++. ++.++|||||+|+++.
T Consensus 92 ~~~~~l~~~~~~~~~l~-~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 92 TCRYAAHHFSDVRKAVR-EVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred EECCchhhccCHHHHHH-HHHHHcCCCcEEEEEE
Confidence 99765 456777777 9999999999999986
No 76
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=125.18 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=91.9
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-------------------------------
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR------------------------------- 191 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~------------------------------- 191 (305)
++.+|||||||+|.++..|+..++ ..+|++||+|+.++..+.+.++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 678999999999999999999874 469999999995444433332211
Q ss_pred -----------------------------CCeEEEEccCCCCccc--ccCCCcEeEEEEeCCC---h------hHHHHHH
Q 021911 192 -----------------------------TNVIPIIEDARHPAKY--RMLVGMVDVIFSDVAQ---P------DQARILA 231 (305)
Q Consensus 192 -----------------------------~nI~~~~~D~~~~~~~--~~~~~~fD~V~~d~~~---~------~~~~~l~ 231 (305)
.||.+++.|+...... .....+||+|+|.... . +..+++.
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 3799999999765411 1235799999997762 1 4556666
Q ss_pred HHHhccCCCCcEEEEEEcccc-c-CCCCchhhhHH----------HHHHHHHH--CCCcEeEEeecC
Q 021911 232 LNASYFLKAGGHFVISIKANC-I-DSTVPAEAVFQ----------SEVKKLQQ--DQFKPFEQVTLE 284 (305)
Q Consensus 232 ~~a~~~LkpGG~lv~s~~~~~-i-~~~~~~~~v~~----------~~~~~l~~--~Gf~~~e~~~l~ 284 (305)
+++++|||||+|++...... . .........+. +..+.|.+ .||+.++.+...
T Consensus 205 -~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~ 270 (292)
T 3g07_A 205 -RIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATP 270 (292)
T ss_dssp -HHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC---
T ss_pred -HHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccC
Confidence 99999999999999752111 0 00000111111 12456666 899988877653
No 77
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.52 E-value=2.6e-13 Score=122.52 Aligned_cols=139 Identities=13% Similarity=0.114 Sum_probs=99.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++.++ .+|+++|+|+.++..+.+.++.. +++.+++.|+.+.+. ...+||+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~ 153 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC---EDNSYDF 153 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS---CTTCEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC---CCCCEeE
Confidence 467889999999999999999999863 58999999996655555444332 579999999987642 3578999
Q ss_pred EEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCch-hhh-----------HHHHHHHHHHCCCcEeEEe
Q 021911 217 IFSDVA---QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPA-EAV-----------FQSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 217 V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~-~~v-----------~~~~~~~l~~~Gf~~~e~~ 281 (305)
|++... .++...++. ++.++|||||+|++++........... ..+ .....+.|+++||+++++.
T Consensus 154 v~~~~~l~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 154 IWSQDAFLHSPDKLKVFQ-ECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp EEEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EEecchhhhcCCHHHHHH-HHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 999765 456777777 999999999999998742211111100 001 1112356688999998876
Q ss_pred ecC
Q 021911 282 TLE 284 (305)
Q Consensus 282 ~l~ 284 (305)
++.
T Consensus 233 ~~~ 235 (297)
T 2o57_A 233 SRP 235 (297)
T ss_dssp ECH
T ss_pred ECc
Confidence 543
No 78
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=2.1e-13 Score=119.00 Aligned_cols=132 Identities=17% Similarity=0.076 Sum_probs=93.9
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
..+|||+|||+|.++..++.. ..+|+++|+|+.+++.+.+.+... .++.+++.|+.+... ..+||+|++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP----TELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC----SSCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC----CCCeeEEEEC
Confidence 359999999999999998764 468999999996666655555432 469999999988652 3599999986
Q ss_pred CC---Ch--hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHH-HHHHHHCCCcEeEEeec
Q 021911 221 VA---QP--DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSE-VKKLQQDQFKPFEQVTL 283 (305)
Q Consensus 221 ~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~-~~~l~~~Gf~~~e~~~l 283 (305)
.. .+ +...++. ++.++|||||+|++............+.....++ .+.|++.||+++++...
T Consensus 140 ~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAK-SMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp SSTTTSCGGGHHHHHH-HHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHH-HHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 65 12 5666776 9999999999999987432211111111122233 45668899999886643
No 79
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.51 E-value=4.1e-13 Score=115.74 Aligned_cols=120 Identities=11% Similarity=-0.051 Sum_probs=83.7
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-------CC
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-------TN 193 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-------~n 193 (305)
+.+........++..+ ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.+.+.+... .+
T Consensus 10 ~~~~~~~~~~~l~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~ 85 (219)
T 3jwg_A 10 KLNLNQQRLGTVVAVL---KSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKR 85 (219)
T ss_dssp --CHHHHHHHHHHHHH---HHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTT
T ss_pred CCcchHHHHHHHHHHH---hhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcc
Confidence 3333444444443333 34567899999999999999999874 4569999999996655555544332 28
Q ss_pred eEEEEccCCCCcccccCCCcEeEEEEeCC---Ch--hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 194 VIPIIEDARHPAKYRMLVGMVDVIFSDVA---QP--DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 194 I~~~~~D~~~~~~~~~~~~~fD~V~~d~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.+++.|+...+. ...+||+|++... .+ +...++. ++.++|||||.|++..
T Consensus 86 v~~~~~d~~~~~~---~~~~fD~V~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 86 ISLFQSSLVYRDK---RFSGYDAATVIEVIEHLDENRLQAFEK-VLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEEECCSSSCCG---GGTTCSEEEEESCGGGCCHHHHHHHHH-HHHTTTCCSEEEEEEE
T ss_pred eEEEeCccccccc---ccCCCCEEEEHHHHHhCCHHHHHHHHH-HHHHhhCCCEEEEEcc
Confidence 9999999965542 2478999998665 22 3356666 9999999999665544
No 80
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.51 E-value=8.3e-14 Score=126.72 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=102.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.++++.+|||+|||+|.++..++....+..+|+++|+|+.++..+.+.+... .+|.+++.|+.+.+. ..+||+
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~ 190 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT----REGYDL 190 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC----CSCEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc----cCCeEE
Confidence 4678899999999999999999744446789999999996666655555443 349999999987642 279999
Q ss_pred EEEeCC---ChhHH---HHHHHHHhccCCCCcEEEEEEcccccC----C-----CCch-------------------h-h
Q 021911 217 IFSDVA---QPDQA---RILALNASYFLKAGGHFVISIKANCID----S-----TVPA-------------------E-A 261 (305)
Q Consensus 217 V~~d~~---~~~~~---~~l~~~a~~~LkpGG~lv~s~~~~~i~----~-----~~~~-------------------~-~ 261 (305)
|+++.+ .++.. +++. ++.++|||||+|++++...... . .... . .
T Consensus 191 v~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T 3ocj_A 191 LTSNGLNIYEPDDARVTELYR-RFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALR 269 (305)
T ss_dssp EECCSSGGGCCCHHHHHHHHH-HHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred EEECChhhhcCCHHHHHHHHH-HHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccC
Confidence 999765 22333 2455 9999999999999987322100 0 0000 0 0
Q ss_pred hHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEE
Q 021911 262 VFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 262 v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~ 297 (305)
...+..+.|+++||++++.... ....+.+++++|
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~~~--~~~~~~~v~a~K 303 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFEDD--RARLFPTVIARK 303 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEECC--TTSSSCEEEEEC
T ss_pred CHHHHHHHHHHCCCEEEEEEcc--cCceeeEEEEec
Confidence 1122246668999999887752 223355666665
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.51 E-value=4e-13 Score=118.75 Aligned_cols=157 Identities=11% Similarity=0.089 Sum_probs=102.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCC---------------------------
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTN--------------------------- 193 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~n--------------------------- 193 (305)
..++.+|||+|||+|.++..++... . .+|+++|+|+.++..+.+.+....+
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 3567899999999999999988762 2 4899999999666555554443221
Q ss_pred ----e-EEEEccCCCCccc-ccCCCcEeEEEEeCCCh-------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCC-c-
Q 021911 194 ----V-IPIIEDARHPAKY-RMLVGMVDVIFSDVAQP-------DQARILALNASYFLKAGGHFVISIKANCIDSTV-P- 258 (305)
Q Consensus 194 ----I-~~~~~D~~~~~~~-~~~~~~fD~V~~d~~~~-------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~-~- 258 (305)
| .+++.|+...... .....+||+|++..... +...++. ++.++|||||+|++++......... .
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~-~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALR-NLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHH-HHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHH-HHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 7 8999999876432 11226899999976622 5566666 9999999999999987322100000 0
Q ss_pred --h-hhhHH-HHHHHHHHCCCcEeEEeecCC-C-----C-CceEEEEEEEcCC
Q 021911 259 --A-EAVFQ-SEVKKLQQDQFKPFEQVTLEP-F-----E-RDHACVVGGYRMP 300 (305)
Q Consensus 259 --~-~~v~~-~~~~~l~~~Gf~~~e~~~l~p-~-----~-~~~~~vv~~~~~~ 300 (305)
. ...-. ...+.|+++||++++...... + . ...++++++|...
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 263 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGR 263 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC-
T ss_pred cccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccccc
Confidence 0 00111 224667889999988775431 1 1 2345666666543
No 82
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.51 E-value=3.8e-13 Score=116.17 Aligned_cols=102 Identities=24% Similarity=0.249 Sum_probs=80.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
+.++.+|||+|||+|.++..+++.. + +|+++|+|+.+++.+.+.++.. .++.+++.|+.+.+ ....+||+|++
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~ 109 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS---FEDKTFDYVIF 109 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC---SCTTCEEEEEE
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC---CCCCcEEEEEE
Confidence 4457899999999999999999873 3 8999999996666655555443 68999999998754 12468999999
Q ss_pred eCC--C---hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 220 DVA--Q---PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 220 d~~--~---~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+.+ . ++...++. ++.++|||||+|++.+.
T Consensus 110 ~~~~~~~~~~~~~~~l~-~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFK-EVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ESCGGGCCHHHHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHH-HHHHHcCCCcEEEEEec
Confidence 776 2 34556666 99999999999999864
No 83
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.51 E-value=2.2e-13 Score=123.60 Aligned_cols=104 Identities=17% Similarity=0.117 Sum_probs=83.0
Q ss_pred cccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCc
Q 021911 137 DNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
+.+.++++.+|||||||+|.++..+++.++ .+|+++|+|+..+..+.+.+... .+|.+++.|+.+. ..+
T Consensus 66 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~ 137 (302)
T 3hem_A 66 DKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF------DEP 137 (302)
T ss_dssp HTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC------CCC
T ss_pred HHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc------CCC
Confidence 334678899999999999999999999874 68999999996666665555543 3799999999764 478
Q ss_pred EeEEEEeCC---C---------hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 214 VDVIFSDVA---Q---------PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 214 fD~V~~d~~---~---------~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
||+|++... . .+...++. ++.++|||||+|++.+.
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFK-KFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHH-HHHHSSCTTCEEEEEEE
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHH-HHHHhcCCCcEEEEEEE
Confidence 999999655 1 22356666 99999999999999873
No 84
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.51 E-value=2.6e-13 Score=121.85 Aligned_cols=101 Identities=22% Similarity=0.213 Sum_probs=81.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
++.+|||+|||+|.++..+++. ..+|+++|+|+.++..+.+.++.. +++.+++.|+.+.+.. ...+||+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH--LETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG--CSSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh--cCCCceEEEE
Confidence 3689999999999999999987 358999999996665555555443 5799999999877532 3579999999
Q ss_pred eCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 220 DVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 220 d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
... .++...++. ++.++|||||+|++++.
T Consensus 143 ~~~l~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 143 HAVLEWVADPRSVLQ-TLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp ESCGGGCSCHHHHHH-HHHHTEEEEEEEEEEEE
T ss_pred CchhhcccCHHHHHH-HHHHHcCCCeEEEEEEe
Confidence 766 456777777 99999999999999873
No 85
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.51 E-value=1.2e-13 Score=125.16 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=99.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++++++|||+|||+|.++..++... +.++|++||+|+.+++.+.+.+++. .+|+++++|+.+.+ ..+||+|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-----d~~FDvV 192 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-----GLEFDVL 192 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-----GCCCSEE
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-----CCCcCEE
Confidence 67899999999999998775544332 4579999999996665555554432 68999999998753 4789999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEEccc--c-cCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISIKAN--C-IDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVV 294 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~--~-i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv 294 (305)
+++...++..+++. ++.++|||||+|++..... . +.....+. ...+|+....+.-... ....+++
T Consensus 193 ~~~a~~~d~~~~l~-el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~----------~~~gf~~~~~~~p~~~-v~N~vv~ 260 (298)
T 3fpf_A 193 MVAALAEPKRRVFR-NIHRYVDTETRIIYRTYTGMRAILYAPVSDD----------DITGFRRAGVVLPSGK-VNNTSVL 260 (298)
T ss_dssp EECTTCSCHHHHHH-HHHHHCCTTCEEEEEECCGGGGGSSCCCCTG----------GGTTEEEEEEECCCTT-CCCEEEE
T ss_pred EECCCccCHHHHHH-HHHHHcCCCcEEEEEcCcchhhhccccCChh----------hhhhhhheeEECCCCC-cCcEEEE
Confidence 99888888888888 9999999999999986211 1 11111111 1247877655433222 2455677
Q ss_pred EEEcCCC
Q 021911 295 GGYRMPK 301 (305)
Q Consensus 295 ~~~~~~~ 301 (305)
+.+...+
T Consensus 261 a~k~~~~ 267 (298)
T 3fpf_A 261 VFKCPDK 267 (298)
T ss_dssp EEECC--
T ss_pred EEccCCc
Confidence 7665554
No 86
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=2.8e-13 Score=113.63 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=81.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CC--eEEEEccCCCCcccccCCCcEe
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TN--VIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~n--I~~~~~D~~~~~~~~~~~~~fD 215 (305)
...++.+|||+|||+|.++..++.. ..+|+++|+|+.++..+.+.+... .+ +.+++.|+.+... ..+||
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D 121 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----DRKYN 121 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT----TSCEE
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc----cCCce
Confidence 4568899999999999999999987 359999999997766666555443 44 9999999977532 46899
Q ss_pred EEEEeCCC----hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 216 VIFSDVAQ----PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 216 ~V~~d~~~----~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+|+++++. .+...++. ++.++|||+|.+++++
T Consensus 122 ~v~~~~~~~~~~~~~~~~l~-~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 122 KIITNPPIRAGKEVLHRIIE-EGKELLKDNGEIWVVI 157 (194)
T ss_dssp EEEECCCSTTCHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred EEEECCCcccchhHHHHHHH-HHHHHcCCCCEEEEEE
Confidence 99999873 23455665 9999999999999997
No 87
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.51 E-value=4.1e-13 Score=117.07 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=78.2
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.++.+|||+|||+|.++..+++. ..+|+++|+|+.++..+.+.+... .++.+++.|+...+. ..+||+|++.
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~v~~~ 108 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI----NRKFDLITCC 108 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC----SCCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCc----cCCceEEEEc
Confidence 36789999999999999999987 248999999996655555544433 379999999876541 3789999997
Q ss_pred C-C---C---hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 221 V-A---Q---PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 221 ~-~---~---~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
. . . ++...++. ++.++|||||+|++++.
T Consensus 109 ~~~l~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFK-AVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp TTGGGGCCSHHHHHHHHH-HHHTTEEEEEEEEEEEE
T ss_pred CccccccCCHHHHHHHHH-HHHHhcCCCcEEEEEec
Confidence 6 3 2 45566666 99999999999999763
No 88
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.51 E-value=9.5e-14 Score=125.71 Aligned_cols=167 Identities=14% Similarity=0.101 Sum_probs=107.0
Q ss_pred chhhHHHHHHHccccccCCC-CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHH-HcCCCeEEE-Ec
Q 021911 123 PFRSKLAAAVLGGVDNIWIK-PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMA-KKRTNVIPI-IE 199 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~-~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a-~~~~nI~~~-~~ 199 (305)
+|.|.-...+...|+.+.+. ++.+|||+|||||.++..+++. ...+|||||+|+ .|++.+ +..+++... ..
T Consensus 64 ~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~----~mL~~a~r~~~rv~~~~~~ 137 (291)
T 3hp7_A 64 RYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGT----NQLVWKLRQDDRVRSMEQY 137 (291)
T ss_dssp CSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSS----SCSCHHHHTCTTEEEECSC
T ss_pred ccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCH----HHHHHHHHhCcccceeccc
Confidence 45565555555555555554 5689999999999999999987 456999999999 555553 333455433 34
Q ss_pred cCCCCcccccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCC---------chhh---hHHHHH
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTV---------PAEA---VFQSEV 267 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~---------~~~~---v~~~~~ 267 (305)
|++..........+||+|++|.+......+|. +++++|||||+|++.++........ ++.. ...+..
T Consensus 138 ni~~l~~~~l~~~~fD~v~~d~sf~sl~~vL~-e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~ 216 (291)
T 3hp7_A 138 NFRYAEPVDFTEGLPSFASIDVSFISLNLILP-ALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVT 216 (291)
T ss_dssp CGGGCCGGGCTTCCCSEEEECCSSSCGGGTHH-HHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHH
T ss_pred CceecchhhCCCCCCCEEEEEeeHhhHHHHHH-HHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHH
Confidence 55444322222335999999999777777777 9999999999999987543311110 1111 222234
Q ss_pred HHHHHCCCcEeEEeecCCC----CCceEEEEEEE
Q 021911 268 KKLQQDQFKPFEQVTLEPF----ERDHACVVGGY 297 (305)
Q Consensus 268 ~~l~~~Gf~~~e~~~l~p~----~~~~~~vv~~~ 297 (305)
+.+.++||.+... ...|. -+-+|++-..+
T Consensus 217 ~~~~~~Gf~v~~~-~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 217 AFAVDYGFSVKGL-DFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HHHHHTTEEEEEE-EECSSCCGGGCCCEEEEEEE
T ss_pred HHHHHCCCEEEEE-EECCCCCCCcCHHHHHHhhh
Confidence 5668899998764 44454 23444444444
No 89
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=3.8e-14 Score=124.59 Aligned_cols=135 Identities=21% Similarity=0.211 Sum_probs=92.6
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
..++.+|||||||+|..+.++++.. ..+|++||+|+..++.+.+.++.. .++.++..|+...... ....+||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~FD~i~~ 134 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT-LPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG-SCTTCEEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccc-ccccCCceEEE
Confidence 4678999999999999999998863 258999999996666665555544 5688888887654322 24578999998
Q ss_pred eCC--------ChhHHHHHHHHHhccCCCCcEEEEEEcccc---cCC-CCchhhhHHHH-HHHHHHCCCcEeE
Q 021911 220 DVA--------QPDQARILALNASYFLKAGGHFVISIKANC---IDS-TVPAEAVFQSE-VKKLQQDQFKPFE 279 (305)
Q Consensus 220 d~~--------~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~---i~~-~~~~~~v~~~~-~~~l~~~Gf~~~e 279 (305)
|.. .++...++. +++++|||||+|++...... ... ......++.+. ...|.++||+.++
T Consensus 135 D~~~~~~~~~~~~~~~~~~~-e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 135 DTYPLSEETWHTHQFNFIKN-HAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHH-THHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred eeeecccchhhhcchhhhhh-hhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 765 345666676 99999999999988641100 111 11122233332 4567788998643
No 90
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=1.2e-13 Score=121.73 Aligned_cols=117 Identities=18% Similarity=0.243 Sum_probs=92.0
Q ss_pred ecCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEE
Q 021911 120 IWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPII 198 (305)
Q Consensus 120 ~~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~ 198 (305)
.+..........++..+ .+.++.+|||+|||+|.++..+++.+ +..+|+++|+|+ .+++.++++ +++.+++
T Consensus 13 ~~~~~~~~~~~~l~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~----~~~~~a~~~~~~~~~~~ 84 (259)
T 2p35_A 13 KFEDERTRPARDLLAQV---PLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDD----DMLEKAADRLPNTNFGK 84 (259)
T ss_dssp CCCCGGGHHHHHHHTTC---CCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCH----HHHHHHHHHSTTSEEEE
T ss_pred HHHHHHHHHHHHHHHhc---CCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCH----HHHHHHHHhCCCcEEEE
Confidence 33333555555665433 46778999999999999999999987 467899999999 555555543 6899999
Q ss_pred ccCCCCcccccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 199 EDARHPAKYRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 199 ~D~~~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.|+.+.+ ...+||+|+++.. .++...++. ++.++|||||+|+++++
T Consensus 85 ~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 85 ADLATWK----PAQKADLLYANAVFQWVPDHLAVLS-QLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CCTTTCC----CSSCEEEEEEESCGGGSTTHHHHHH-HHGGGEEEEEEEEEEEE
T ss_pred CChhhcC----ccCCcCEEEEeCchhhCCCHHHHHH-HHHHhcCCCeEEEEEeC
Confidence 9998765 2578999999776 457777787 99999999999999874
No 91
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.50 E-value=2e-13 Score=115.40 Aligned_cols=100 Identities=19% Similarity=0.140 Sum_probs=79.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.++..+.+.+... +++.+++.|+...+. ..+||+|+
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~ 102 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF----DRQYDFIL 102 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC----CCCEEEEE
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC----CCCceEEE
Confidence 456789999999999999999987 348999999996666655554433 489999999877542 47899999
Q ss_pred EeCC-----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 219 SDVA-----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 219 ~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+..+ ..+...++. ++.++|||||+|++.+
T Consensus 103 ~~~~l~~~~~~~~~~~l~-~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIA-NMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EESCGGGSCGGGHHHHHH-HHHHTEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHH-HHHHhcCCCeEEEEEE
Confidence 9765 125666776 9999999999988865
No 92
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.50 E-value=2.4e-13 Score=126.50 Aligned_cols=142 Identities=23% Similarity=0.243 Sum_probs=103.7
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEcc
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIED 200 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D 200 (305)
|....+++.++..+ .++++.+|||+|||+|+++..+|...++...|+++|+|+.+++.+.++++.. .+|++++.|
T Consensus 186 ~l~~~la~~l~~~~---~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D 262 (354)
T 3tma_A 186 SLTPVLAQALLRLA---DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRAD 262 (354)
T ss_dssp SCCHHHHHHHHHHT---TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CcCHHHHHHHHHHh---CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCC
Confidence 44556666665433 4677899999999999999999998756679999999997777666666554 379999999
Q ss_pred CCCCcccccCCCcEeEEEEeCCCh-----------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHH
Q 021911 201 ARHPAKYRMLVGMVDVIFSDVAQP-----------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKK 269 (305)
Q Consensus 201 ~~~~~~~~~~~~~fD~V~~d~~~~-----------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~ 269 (305)
+.+.+.. ...||+|++|+|.- .+..++. .+.++|||||++++.+. ++. . ...
T Consensus 263 ~~~~~~~---~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~-~~~~~LkpgG~l~i~t~--------~~~-~----~~~ 325 (354)
T 3tma_A 263 ARHLPRF---FPEVDRILANPPHGLRLGRKEGLFHLYWDFLR-GALALLPPGGRVALLTL--------RPA-L----LKR 325 (354)
T ss_dssp GGGGGGT---CCCCSEEEECCCSCC----CHHHHHHHHHHHH-HHHHTSCTTCEEEEEES--------CHH-H----HHH
T ss_pred hhhCccc---cCCCCEEEECCCCcCccCCcccHHHHHHHHHH-HHHHhcCCCcEEEEEeC--------CHH-H----HHH
Confidence 9886532 35689999999931 1245555 89999999999999982 111 1 223
Q ss_pred HHHCCCcEeEEeecC
Q 021911 270 LQQDQFKPFEQVTLE 284 (305)
Q Consensus 270 l~~~Gf~~~e~~~l~ 284 (305)
+.+.||++.+...+.
T Consensus 326 ~~~~g~~~~~~~~l~ 340 (354)
T 3tma_A 326 ALPPGFALRHARVVE 340 (354)
T ss_dssp HCCTTEEEEEEEECC
T ss_pred HhhcCcEEEEEEEEE
Confidence 312788887766553
No 93
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=2e-13 Score=116.09 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=75.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-------------
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK------------- 206 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~------------- 206 (305)
++++.+|||+|||+|.++.++++.+.+ .++|+++|+|+. ...+++.+++.|+.+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~---------~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM---------DPIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC---------CCCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc---------CCCCCceEEEccccchhhhhhcccccccccc
Confidence 578899999999999999999998743 579999999982 123689999999977540
Q ss_pred ----c-----ccCCCcEeEEEEeCCC-------hhHH-------HHHHHHHhccCCCCcEEEEEE
Q 021911 207 ----Y-----RMLVGMVDVIFSDVAQ-------PDQA-------RILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 207 ----~-----~~~~~~fD~V~~d~~~-------~~~~-------~~l~~~a~~~LkpGG~lv~s~ 248 (305)
. .....+||+|+++.+. .+.. .++. ++.++|||||.|++.+
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~-~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITH-FMEQYINIGGTYIVKM 154 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHH-HHHHHccCCCEEEEEE
Confidence 0 0124689999998752 2222 2455 8999999999999976
No 94
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.50 E-value=3.7e-13 Score=120.12 Aligned_cols=105 Identities=20% Similarity=0.199 Sum_probs=85.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++.. +..+|+++|+|+..+..+.+.+... +++.+++.|+...+. ...+||+|
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v 109 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF---EDSSFDHI 109 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS---CTTCEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC---CCCCeeEE
Confidence 45788999999999999999999984 5679999999996666555555443 589999999986542 35799999
Q ss_pred EEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 218 FSDVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 218 ~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+++.. .++...++. ++.++|||||+|++.+.
T Consensus 110 ~~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 110 FVCFVLEHLQSPEEALK-SLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred EEechhhhcCCHHHHHH-HHHHHcCCCcEEEEEEc
Confidence 99776 456667777 99999999999999863
No 95
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.49 E-value=2.2e-13 Score=119.44 Aligned_cols=141 Identities=13% Similarity=0.003 Sum_probs=97.7
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+.+.+... .++.+++.|+...+. ..++||+|++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v~~ 152 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP---EPDSYDVIWI 152 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC---CSSCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC---CCCCEEEEEE
Confidence 368899999999999999998874 458999999996655555444432 368899999876542 2458999999
Q ss_pred eCC---Chh--HHHHHHHHHhccCCCCcEEEEEEccccc----CCCCchhh-hHHHHHHHHHHCCCcEeEEeecCCCCC
Q 021911 220 DVA---QPD--QARILALNASYFLKAGGHFVISIKANCI----DSTVPAEA-VFQSEVKKLQQDQFKPFEQVTLEPFER 288 (305)
Q Consensus 220 d~~---~~~--~~~~l~~~a~~~LkpGG~lv~s~~~~~i----~~~~~~~~-v~~~~~~~l~~~Gf~~~e~~~l~p~~~ 288 (305)
+.. .++ ...++. ++.++|||||+|++++..... ........ -..+..+.|+++||++++......+..
T Consensus 153 ~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 230 (241)
T 2ex4_A 153 QWVIGHLTDQHLAEFLR-RCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPD 230 (241)
T ss_dssp ESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCSCCT
T ss_pred cchhhhCCHHHHHHHHH-HHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCCCcc
Confidence 865 222 346666 999999999999998732110 00000000 122334666889999999887766654
No 96
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.49 E-value=3.1e-13 Score=117.05 Aligned_cols=102 Identities=17% Similarity=0.163 Sum_probs=78.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-------CCeEEEEccCCCCcccccCCCc
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-------TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-------~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
++++.+|||+|||+|.++..++.. ..+|+++|+|+.++..+.+.+... .++.+++.|+...+. ...+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~ 101 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF---HDSS 101 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS---CTTC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC---CCCc
Confidence 567899999999999999999987 348999999995555554444432 257999999987642 3579
Q ss_pred EeEEEEeCC---ChhHH---HHHHHHHhccCCCCcEEEEEEc
Q 021911 214 VDVIFSDVA---QPDQA---RILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 214 fD~V~~d~~---~~~~~---~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
||+|++... .++.. .++. ++.++|||||+|++++.
T Consensus 102 ~D~v~~~~~l~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 102 FDFAVMQAFLTSVPDPKERSRIIK-EVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEEEEESCGGGCCCHHHHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred eeEEEEcchhhcCCCHHHHHHHHH-HHHHHcCCCeEEEEEEC
Confidence 999999765 22222 5665 99999999999999874
No 97
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.49 E-value=5.4e-14 Score=122.36 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=84.2
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
..++.+|||||||+|.++..+|... +...|++||+|+.++..+.+.++.. +||.+++.|+.+..+......+||+|+
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 32 GREAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp SSCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 3467899999999999999999875 6779999999998777777776654 689999999877532112467999999
Q ss_pred EeCCChh-----------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 219 SDVAQPD-----------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 219 ~d~~~~~-----------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++.+.|. +..++. .+.++|||||.|++++
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~-~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAE-LVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHH-HHHHHEEEEEEEEEEE
T ss_pred EeCCCCccchhhhhhhhhhHHHHH-HHHHHcCCCcEEEEEe
Confidence 9855331 124666 8999999999999998
No 98
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=3.9e-13 Score=112.83 Aligned_cols=139 Identities=20% Similarity=0.160 Sum_probs=98.7
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
++++.+|||+|||+|.++..++.. ..+|+++|+|+ .+++.++++ +++.+++.|+...+. ...+||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~----~~~~~a~~~~~~~~~~~~d~~~~~~---~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDP----ILIDYAKQDFPEARWVVGDLSVDQI---SETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCH----HHHHHHHHHCTTSEEEECCTTTSCC---CCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCH----HHHHHHHHhCCCCcEEEcccccCCC---CCCceeEEEE
Confidence 467899999999999999999987 24899999999 555555544 579999999987532 2468999999
Q ss_pred eCCC------hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeec---CCCC--C
Q 021911 220 DVAQ------PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTL---EPFE--R 288 (305)
Q Consensus 220 d~~~------~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l---~p~~--~ 288 (305)
+.+. ++...++. ++.++|||+|.+++++.... . .......+.+++.||++++.... .|+. .
T Consensus 114 ~~~~~~~~~~~~~~~~l~-~~~~~l~~~G~l~~~~~~~~---~----~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~ 185 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALA-NIHRALGADGRAVIGFGAGR---G----WVFGDFLEVAERVGLELENAFESWDLKPFVQGS 185 (195)
T ss_dssp CCCCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEETTS---S----CCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTC
T ss_pred CCcHHhhcChHHHHHHHH-HHHHHhCCCCEEEEEeCCCC---C----cCHHHHHHHHHHcCCEEeeeecccccCcCCCCC
Confidence 7431 34456666 99999999999999873211 1 11223346667889999877532 3433 3
Q ss_pred ceEEEEEEE
Q 021911 289 DHACVVGGY 297 (305)
Q Consensus 289 ~~~~vv~~~ 297 (305)
.+.++++++
T Consensus 186 ~~~~~v~~k 194 (195)
T 3cgg_A 186 EFLVAVFTK 194 (195)
T ss_dssp SEEEEEEEE
T ss_pred cEEEEEEec
Confidence 455555554
No 99
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.49 E-value=8.3e-14 Score=123.04 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=84.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCccccc---CCCcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRM---LVGMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~---~~~~f 214 (305)
..+..+|||+|||+|..+..+|+.+.+.++|++||+|+.+++.+.+.++.. ++|++++.|+.+..+... ...+|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 445689999999999999999998866789999999986554444444433 589999999866432200 03689
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|++|.+..+....+. ++.++|||||.|++..
T Consensus 138 D~V~~d~~~~~~~~~l~-~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 138 DFIFIDADKTNYLNYYE-LALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEEEESCGGGHHHHHH-HHHHHEEEEEEEEEEC
T ss_pred eEEEEcCChHHhHHHHH-HHHHhcCCCeEEEEEC
Confidence 99999999877777787 9999999999999964
No 100
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.49 E-value=4.1e-13 Score=111.57 Aligned_cols=125 Identities=18% Similarity=0.105 Sum_probs=90.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C-CeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T-NVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~-nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++.++++.+ +..+|+++|+|+.+++.+.+.++.. + ++ +++.|+....+. ...+||+
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~--~~~~~D~ 97 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD--VPDNPDV 97 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG--CCSCCSE
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc--cCCCCCE
Confidence 57788999999999999999999986 5679999999996666665555443 3 78 888887553221 2378999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFE 279 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e 279 (305)
|+++.+... ..++. ++.++|||||+|++.+. + . .-.......+++.++++..
T Consensus 98 i~~~~~~~~-~~~l~-~~~~~L~~gG~l~~~~~--~------~-~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 98 IFIGGGLTA-PGVFA-AAWKRLPVGGRLVANAV--T------V-ESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp EEECC-TTC-TTHHH-HHHHTCCTTCEEEEEEC--S------H-HHHHHHHHHHHHHCCEEEE
T ss_pred EEECCcccH-HHHHH-HHHHhcCCCCEEEEEee--c------c-ccHHHHHHHHHHcCCeeEE
Confidence 999887655 55666 89999999999999872 1 1 1112224455666676654
No 101
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=3.7e-13 Score=116.71 Aligned_cols=149 Identities=14% Similarity=0.118 Sum_probs=97.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccc---cCCCcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYR---MLVGMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~---~~~~~f 214 (305)
..+..+|||+|||+|..+.++|+.+.+.++|++||+|+.+++.+.+.++.. .+|++++.|+.+..+.. ....+|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 456789999999999999999998766789999999996665555544432 46999999986532221 012689
Q ss_pred eEEEEeCCChhHH---HHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHH-CCCcEeEEeecCCCC-Cc
Q 021911 215 DVIFSDVAQPDQA---RILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ-DQFKPFEQVTLEPFE-RD 289 (305)
Q Consensus 215 D~V~~d~~~~~~~---~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~-~Gf~~~e~~~l~p~~-~~ 289 (305)
|+|++|....... +.+. .+ ++|||||.|++.. +..... ....+.+++ ..|+....-...++. ..
T Consensus 136 D~V~~d~~~~~~~~~~~~~~-~~-~~LkpgG~lv~~~---~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 204 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLE-KC-GLLRKGTVLLADN---VIVPGT------PDFLAYVRGSSSFECTHYSSYLEYMKVV 204 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHH-HT-TCCCTTCEEEESC---CCCCCC------HHHHHHHHHCTTEEEEEEEEEETTTTEE
T ss_pred EEEEEcCCcccchHHHHHHH-hc-cccCCCeEEEEeC---CCCcch------HHHHHHHhhCCCceEEEcccccccCCCC
Confidence 9999998754333 3444 55 9999999999875 222111 122344433 345544333333443 34
Q ss_pred eEEEEEEEcCC
Q 021911 290 HACVVGGYRMP 300 (305)
Q Consensus 290 ~~~vv~~~~~~ 300 (305)
..+.+++++.+
T Consensus 205 dG~~~~~~~g~ 215 (221)
T 3u81_A 205 DGLEKAIYQGP 215 (221)
T ss_dssp EEEEEEEECCC
T ss_pred CceEEEEEeCC
Confidence 56677777654
No 102
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=7.9e-14 Score=125.01 Aligned_cols=98 Identities=21% Similarity=0.341 Sum_probs=81.2
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+.++.+|||+|||+|.++..+++ +..+|+++|+|+ .+++.++++ +++.+++.|+...+. ..+||+|+
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~----~~~~~a~~~~~~~~~~~~d~~~~~~----~~~fD~v~ 122 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAA----TMIEKARQNYPHLHFDVADARNFRV----DKPLDAVF 122 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCH----HHHHHHHHHCTTSCEEECCTTTCCC----SSCEEEEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCH----HHHHHHHhhCCCCEEEECChhhCCc----CCCcCEEE
Confidence 467789999999999999999998 346999999999 555555544 689999999987542 47999999
Q ss_pred EeCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 219 SDVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 219 ~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+... .++...++. ++.++|||||+|++++.
T Consensus 123 ~~~~l~~~~d~~~~l~-~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 123 SNAMLHWVKEPEAAIA-SIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred EcchhhhCcCHHHHHH-HHHHhcCCCcEEEEEec
Confidence 9776 367777887 99999999999999874
No 103
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.49 E-value=6.5e-13 Score=112.98 Aligned_cols=133 Identities=14% Similarity=0.109 Sum_probs=92.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
+.++ +|||+|||+|.++..+++. ..+|+++|+|+.++..+.+.+... .++.+++.|+...+ ....+||+|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD---IVADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS---CCTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC---CCcCCccEEEE
Confidence 4566 9999999999999999986 248999999996655555444332 48999999998764 22468999998
Q ss_pred eCCC---hhHHHHHHHHHhccCCCCcEEEEEEcccccC-----CCCc-hhhhHHHHHHHHHHCCCcEeEEee
Q 021911 220 DVAQ---PDQARILALNASYFLKAGGHFVISIKANCID-----STVP-AEAVFQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 220 d~~~---~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~-----~~~~-~~~v~~~~~~~l~~~Gf~~~e~~~ 282 (305)
.... .+...++. ++.++|||||+|++++...... .... ....-.+++..+-+ ||++++...
T Consensus 101 ~~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-Gf~v~~~~~ 170 (202)
T 2kw5_A 101 IFCHLPSSLRQQLYP-KVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP-SLNWLIANN 170 (202)
T ss_dssp ECCCCCHHHHHHHHH-HHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS-SSCEEEEEE
T ss_pred EhhcCCHHHHHHHHH-HHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc-CceEEEEEE
Confidence 6552 34556666 9999999999999998432211 0001 11223344555544 999887654
No 104
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.49 E-value=3.6e-13 Score=117.49 Aligned_cols=96 Identities=20% Similarity=0.228 Sum_probs=77.9
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.++.+|||+|||+|.++..+++.. .+|+++|+|+ .+++.++++ .++.+++.|+.+.. ..++||+|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~----~~~~~a~~~~~~~v~~~~~d~~~~~----~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASE----EAISHAQGRLKDGITYIHSRFEDAQ----LPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCH----HHHHHHHHHSCSCEEEEESCGGGCC----CSSCEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCH----HHHHHHHHhhhCCeEEEEccHHHcC----cCCcccEEEE
Confidence 467899999999999999999873 2799999999 555555443 28999999997762 3578999999
Q ss_pred eCC---ChhHHHHHHHHHh-ccCCCCcEEEEEEc
Q 021911 220 DVA---QPDQARILALNAS-YFLKAGGHFVISIK 249 (305)
Q Consensus 220 d~~---~~~~~~~l~~~a~-~~LkpGG~lv~s~~ 249 (305)
... .++...++. ++. ++|||||+|+++++
T Consensus 110 ~~~l~~~~~~~~~l~-~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 110 THVLEHIDDPVALLK-RINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ESCGGGCSSHHHHHH-HHHHTTEEEEEEEEEEEE
T ss_pred hhHHHhhcCHHHHHH-HHHHHhcCCCCEEEEEcC
Confidence 766 356777787 999 99999999999984
No 105
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.48 E-value=5e-13 Score=116.31 Aligned_cols=95 Identities=20% Similarity=0.266 Sum_probs=76.3
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.++.+|||+|||+|.++..+++... +|+++|+|+ .+++.++++ +++.+++.|+...+. ..+||+|+|.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~----~~~~~a~~~~~~~~~~~~d~~~~~~----~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSE----DMLTHARKRLPDATLHQGDMRDFRL----GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCH----HHHHHHHHHCTTCEEEECCTTTCCC----SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCH----HHHHHHHHhCCCCEEEECCHHHccc----CCCCcEEEEc
Confidence 5778999999999999999999852 899999999 555555544 679999999987642 4689999963
Q ss_pred CC------C-hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 221 VA------Q-PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 221 ~~------~-~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.. . .+...++. ++.++|||||+|++++
T Consensus 108 ~~~~~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVA-SFAEHLEPGGVVVVEP 141 (239)
T ss_dssp TTGGGGCCSHHHHHHHHH-HHHHTEEEEEEEEECC
T ss_pred CchHhhcCCHHHHHHHHH-HHHHhcCCCeEEEEEe
Confidence 32 2 34556666 9999999999999986
No 106
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.48 E-value=5.2e-13 Score=116.46 Aligned_cols=100 Identities=23% Similarity=0.295 Sum_probs=80.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...++.+|||+|||+|.++..+++. ...+|+++|+|+ .+++.++++ .++.+++.|+...+ ....+||+
T Consensus 40 ~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~~d~~~~~---~~~~~fD~ 110 (243)
T 3bkw_A 40 PEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSE----KMLARARAAGPDTGITYERADLDKLH---LPQDSFDL 110 (243)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCH----HHHHHHHHTSCSSSEEEEECCGGGCC---CCTTCEEE
T ss_pred cccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCH----HHHHHHHHhcccCCceEEEcChhhcc---CCCCCceE
Confidence 3457899999999999999999987 233899999999 555555554 47999999987654 22578999
Q ss_pred EEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 217 IFSDVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 217 V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
|++... .++...++. ++.++|||||+|++++.
T Consensus 111 v~~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 111 AYSSLALHYVEDVARLFR-TVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEESCGGGCSCHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred EEEeccccccchHHHHHH-HHHHhcCcCcEEEEEeC
Confidence 999766 356777777 99999999999999874
No 107
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.48 E-value=8.8e-14 Score=120.50 Aligned_cols=107 Identities=12% Similarity=0.183 Sum_probs=86.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccC---CCcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRML---VGMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~---~~~f 214 (305)
..++.+|||+|||+|..+.++++.+.+.++|+++|+|+.+++.+.+.++.. .+|++++.|+.+..+.... ..+|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 456789999999999999999998755789999999997766666655543 4699999998654322100 1689
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|+++.+..+...++. ++.++|||||+|++..
T Consensus 142 D~v~~~~~~~~~~~~l~-~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 142 DLIYIDADKANTDLYYE-ESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEECSCGGGHHHHHH-HHHHHEEEEEEEEEEC
T ss_pred cEEEECCCHHHHHHHHH-HHHHhcCCCcEEEEeC
Confidence 99999999888888887 9999999999999975
No 108
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.48 E-value=8.7e-13 Score=113.65 Aligned_cols=103 Identities=14% Similarity=-0.049 Sum_probs=78.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-------CCeEEEEccCCCCcccccCCCc
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-------TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-------~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
..++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.+.+.+... .++.+++.|+...+. ...+
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~ 102 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK---RFHG 102 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG---GGCS
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc---cCCC
Confidence 4577899999999999999999874 4569999999996665555554432 279999999865542 2478
Q ss_pred EeEEEEeCCC---h--hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 214 VDVIFSDVAQ---P--DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 214 fD~V~~d~~~---~--~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
||+|++.... + +...++. ++.++|||||.|+++.
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 103 YDAATVIEVIEHLDLSRLGAFER-VLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHH-HHHTTTCCSEEEEEEE
T ss_pred cCEEeeHHHHHcCCHHHHHHHHH-HHHHHcCCCEEEEEcc
Confidence 9999987662 2 3466666 9999999999776654
No 109
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.47 E-value=1.9e-13 Score=119.58 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=86.2
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcc-cccCCCcEeE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAK-YRMLVGMVDV 216 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~-~~~~~~~fD~ 216 (305)
..++.+|||+|||+|..+..+|... +..+|++||+|+.++..+.+.++.. ++|.+++.|+.+..+ . +..+||+
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~~fD~ 145 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV--NDKVYDM 145 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH--TTSCEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh--ccCCccE
Confidence 4577899999999999999999954 5679999999997766666655544 489999999977543 2 2579999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.+......++. .+.++|||||+|++..
T Consensus 146 V~~~~~~~~~~~~l~-~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 146 IFIDAAKAQSKKFFE-IYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEETTSSSHHHHHH-HHGGGEEEEEEEEEEC
T ss_pred EEEcCcHHHHHHHHH-HHHHhcCCCeEEEEee
Confidence 999999888888887 9999999999998853
No 110
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.47 E-value=1.3e-12 Score=117.23 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=82.6
Q ss_pred cccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCc
Q 021911 137 DNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
+.+.+.++.+|||+|||+|.++..+++..+ .+|+++|+|+..+..+.+.++.. +++.+++.|+.+.+ .+
T Consensus 58 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~ 129 (287)
T 1kpg_A 58 GKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------EP 129 (287)
T ss_dssp TTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------CC
T ss_pred HHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC------CC
Confidence 334577889999999999999999997764 49999999996665555555433 48999999986542 68
Q ss_pred EeEEEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 214 VDVIFSDVA-----QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 214 fD~V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
||+|++... .++...++. ++.++|||||+|++.+.
T Consensus 130 fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHERYDAFFS-LAHRLLPADGVMLLHTI 169 (287)
T ss_dssp CSEEEEESCGGGTCTTTHHHHHH-HHHHHSCTTCEEEEEEE
T ss_pred eeEEEEeCchhhcChHHHHHHHH-HHHHhcCCCCEEEEEEe
Confidence 999998654 256677777 99999999999999874
No 111
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.47 E-value=5.2e-13 Score=118.62 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=99.3
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCC-CeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRT-NVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~-nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
+.++.+|||+|||+|.++..+++. +. +|+++|+|+.++..+.++++.+. ++.+++.|+.... ...+||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~----~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAAL----PFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHG----GGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcC----cCCCCCEEEE
Confidence 567899999999999999998886 33 99999999977777766665542 2888888876531 2468999999
Q ss_pred eCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEE
Q 021911 220 DVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGG 296 (305)
Q Consensus 220 d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~ 296 (305)
+.+......++. ++.++|||||+|+++.... . ......+.+++.||++.+..... ++..++++
T Consensus 191 n~~~~~~~~~l~-~~~~~LkpgG~lils~~~~---~------~~~~v~~~l~~~Gf~~~~~~~~~----~W~~l~~~ 253 (254)
T 2nxc_A 191 NLYAELHAALAP-RYREALVPGGRALLTGILK---D------RAPLVREAMAGAGFRPLEEAAEG----EWVLLAYG 253 (254)
T ss_dssp ECCHHHHHHHHH-HHHHHEEEEEEEEEEEEEG---G------GHHHHHHHHHHTTCEEEEEEEET----TEEEEEEE
T ss_pred CCcHHHHHHHHH-HHHHHcCCCCEEEEEeecc---C------CHHHHHHHHHHCCCEEEEEeccC----CeEEEEEE
Confidence 987666666666 9999999999999986211 0 11223466788999998876543 34555554
No 112
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.47 E-value=5.3e-14 Score=120.13 Aligned_cols=161 Identities=16% Similarity=0.075 Sum_probs=93.8
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccC
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDA 201 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~ 201 (305)
|....+...++..+. ...++.+|||+|||+|.++..+++.. +..+|+++|+|+.++..+.+.+... .++.+++.|+
T Consensus 12 ~~~~~~~~~~~~~l~--~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~ 88 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLK--RMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHHHHT--TCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHH
T ss_pred ccHHHHHHHHHHHhh--hcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcch
Confidence 334556666654443 22678999999999999999999985 5679999999994443333333222 1678888888
Q ss_pred CCCccc-ccCCCcEeEEEEeCCChh-----------------------------HHHHHHHHHhccCCCCcE-EEEEEcc
Q 021911 202 RHPAKY-RMLVGMVDVIFSDVAQPD-----------------------------QARILALNASYFLKAGGH-FVISIKA 250 (305)
Q Consensus 202 ~~~~~~-~~~~~~fD~V~~d~~~~~-----------------------------~~~~l~~~a~~~LkpGG~-lv~s~~~ 250 (305)
.++... .....+||+|++|+|... ...++. ++.++|||||+ +++.+.
T Consensus 89 ~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~~- 166 (215)
T 4dzr_A 89 IEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAA-LPPYVLARGRAGVFLEVG- 166 (215)
T ss_dssp HHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHT-CCGGGBCSSSEEEEEECT-
T ss_pred HhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHH-HHHHHhcCCCeEEEEEEC-
Confidence 763211 011379999999987311 044555 88999999999 555541
Q ss_pred cccCCCCchhhhHHHHHHHHH--HCCCcEeEEeecCCCCCceEEEEEEEcC
Q 021911 251 NCIDSTVPAEAVFQSEVKKLQ--QDQFKPFEQVTLEPFERDHACVVGGYRM 299 (305)
Q Consensus 251 ~~i~~~~~~~~v~~~~~~~l~--~~Gf~~~e~~~l~p~~~~~~~vv~~~~~ 299 (305)
.... ....+.++ +.+|..++... .+....-++++.++.
T Consensus 167 -----~~~~----~~~~~~l~~~~~gf~~~~~~~--~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 167 -----HNQA----DEVARLFAPWRERGFRVRKVK--DLRGIDRVIAVTREP 206 (215)
T ss_dssp -----TSCH----HHHHHHTGGGGGGTEECCEEE--CTTSCEEEEEEEECC
T ss_pred -----CccH----HHHHHHHHHhhcCCceEEEEE--ecCCCEEEEEEEEcC
Confidence 1111 12234556 77887766543 233335566776654
No 113
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.47 E-value=5e-13 Score=111.44 Aligned_cols=131 Identities=9% Similarity=0.028 Sum_probs=92.3
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
.++.+|||+|||+|.++..+++.. +|+++|+|+ .+++. ..++.+++.|+.++.. ..+||+|++++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~----~~~~~---~~~~~~~~~d~~~~~~----~~~fD~i~~n~ 86 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNI----RALES---HRGGNLVRADLLCSIN----QESVDVVVFNP 86 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCH----HHHHT---CSSSCEEECSTTTTBC----GGGCSEEEECC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC----cEEEEECCH----HHHhc---ccCCeEEECChhhhcc----cCCCCEEEECC
Confidence 467799999999999999999873 899999999 44444 5689999999987432 36899999998
Q ss_pred CCh------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCc
Q 021911 222 AQP------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERD 289 (305)
Q Consensus 222 ~~~------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~ 289 (305)
+.. +...++. ++.+.| |+|.+++++... .......+.+++.||+..++...... .+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l-pgG~l~~~~~~~---------~~~~~l~~~l~~~gf~~~~~~~~~~~-~e 154 (170)
T 3q87_B 87 PYVPDTDDPIIGGGYLGREVID-RFVDAV-TVGMLYLLVIEA---------NRPKEVLARLEERGYGTRILKVRKIL-GE 154 (170)
T ss_dssp CCBTTCCCTTTBCCGGGCHHHH-HHHHHC-CSSEEEEEEEGG---------GCHHHHHHHHHHTTCEEEEEEEEECS-SS
T ss_pred CCccCCccccccCCcchHHHHH-HHHhhC-CCCEEEEEEecC---------CCHHHHHHHHHHCCCcEEEEEeeccC-Cc
Confidence 832 2345555 677777 999999987211 11122346678899998876543222 23
Q ss_pred eEEEEEEEcCC
Q 021911 290 HACVVGGYRMP 300 (305)
Q Consensus 290 ~~~vv~~~~~~ 300 (305)
-+++.++.++
T Consensus 155 -~~~~~~~~~~ 164 (170)
T 3q87_B 155 -TVYIIKGEKS 164 (170)
T ss_dssp -EEEEEEEECC
T ss_pred -eEEEEEEecc
Confidence 3344554444
No 114
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=5.2e-13 Score=115.43 Aligned_cols=124 Identities=22% Similarity=0.252 Sum_probs=89.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
++.+|||+|||+|.++..++.. +++|+|+ .+++.++++ ++.+++.|+...+ ....+||+|++...
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~----~~~~~a~~~-~~~~~~~d~~~~~---~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSE----RMAEIARKR-GVFVLKGTAENLP---LKDESFDFALMVTT 111 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCH----HHHHHHHHT-TCEEEECBTTBCC---SCTTCEEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCH----HHHHHHHhc-CCEEEEcccccCC---CCCCCeeEEEEcch
Confidence 3789999999999999887653 9999999 667777665 8999999987654 23468999999766
Q ss_pred ---ChhHHHHHHHHHhccCCCCcEEEEEEcccccC-----------CC--Cchhh-hHHHHHHHHHHCCCcEeEEee
Q 021911 223 ---QPDQARILALNASYFLKAGGHFVISIKANCID-----------ST--VPAEA-VFQSEVKKLQQDQFKPFEQVT 282 (305)
Q Consensus 223 ---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~-----------~~--~~~~~-v~~~~~~~l~~~Gf~~~e~~~ 282 (305)
.++...++. ++.++|||||.|++++...... .. ..... ...+..+.|+++||++++...
T Consensus 112 l~~~~~~~~~l~-~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 112 ICFVDDPERALK-EAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp GGGSSCHHHHHH-HHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HhhccCHHHHHH-HHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 456677777 9999999999999987422100 00 00000 112224566889999887654
No 115
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.47 E-value=5.2e-13 Score=120.94 Aligned_cols=98 Identities=19% Similarity=0.184 Sum_probs=76.9
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-----CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-----TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-----~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
..+|||||||+|.++..+++. ..+|+++|+|+.+++.+.+.+... .+|.+++.|+.+.+. ..+||+|+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~ 155 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL----DKRFGTVV 155 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC----SCCEEEEE
T ss_pred CCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc----CCCcCEEE
Confidence 459999999999999999987 258999999996666555555443 579999999987642 57999998
Q ss_pred EeCC-----Ch-hHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 219 SDVA-----QP-DQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 219 ~d~~-----~~-~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+... .+ +...++. ++.++|||||+|++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 156 ISSGSINELDEADRRGLYA-SVREHLEPGGKFLLSLA 191 (299)
T ss_dssp ECHHHHTTSCHHHHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred ECCcccccCCHHHHHHHHH-HHHHHcCCCcEEEEEee
Confidence 6422 22 3466666 99999999999999874
No 116
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.46 E-value=1.3e-13 Score=114.93 Aligned_cols=119 Identities=18% Similarity=0.145 Sum_probs=84.2
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEc
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIE 199 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~ 199 (305)
|....+...++..+. ...++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+.+.++.. +++.+++.
T Consensus 13 p~~~~~~~~~~~~l~--~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 88 (177)
T 2esr_A 13 PTSDKVRGAIFNMIG--PYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM 88 (177)
T ss_dssp -----CHHHHHHHHC--SCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS
T ss_pred cCHHHHHHHHHHHHH--hhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 334444555544333 2456789999999999999999987 4569999999997766666666554 36999999
Q ss_pred cCCCCcccccCCCcEeEEEEeCCC--hhHHHHHHHHHh--ccCCCCcEEEEEE
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVAQ--PDQARILALNAS--YFLKAGGHFVISI 248 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~a~--~~LkpGG~lv~s~ 248 (305)
|+.+..+. ....||+|+++++. ....+.+. .+. ++|||||.|++++
T Consensus 89 d~~~~~~~--~~~~fD~i~~~~~~~~~~~~~~~~-~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 89 EAERAIDC--LTGRFDLVFLDPPYAKETIVATIE-ALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp CHHHHHHH--BCSCEEEEEECCSSHHHHHHHHHH-HHHHTTCEEEEEEEEEEE
T ss_pred cHHHhHHh--hcCCCCEEEECCCCCcchHHHHHH-HHHhCCCcCCCcEEEEEE
Confidence 98764321 24579999999885 23334444 554 9999999999987
No 117
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.46 E-value=1.3e-12 Score=119.33 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=83.3
Q ss_pred cccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCc
Q 021911 137 DNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
+.+.+.++.+|||+|||+|.++..+++.++ .+|+++|+|+..+..+.+.++.. +++.+++.|+.+.+ .+
T Consensus 84 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~ 155 (318)
T 2fk8_A 84 DKLDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA------EP 155 (318)
T ss_dssp TTSCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC------CC
T ss_pred HhcCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC------CC
Confidence 334577899999999999999999998863 59999999996666555555443 46999999986542 68
Q ss_pred EeEEEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 214 VDVIFSDVA-----QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 214 fD~V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
||+|++... .++...++. ++.++|||||+|++.+.
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFK-RCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHH-HHHHHSCTTCEEEEEEE
T ss_pred cCEEEEeChHHhcCHHHHHHHHH-HHHHhcCCCcEEEEEEe
Confidence 999998754 256777787 99999999999999874
No 118
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.7e-13 Score=124.16 Aligned_cols=108 Identities=14% Similarity=0.048 Sum_probs=85.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc----CCCeEEEEccCCCCcccc---cCCC
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK----RTNVIPIIEDARHPAKYR---MLVG 212 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~----~~nI~~~~~D~~~~~~~~---~~~~ 212 (305)
...++.+|||+|||+|.++..+++.+.+..+|+++|+|+.++..+.+.++. ..++.+++.|+.+.+... ...+
T Consensus 33 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 33 HDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred hcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 346789999999999999999998764677999999999766666655544 368999999998765321 0126
Q ss_pred cEeEEEEeCC--ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVA--QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+||+|++... +.+...++. ++.++|||||.|++.+
T Consensus 113 ~fD~V~~~~~l~~~~~~~~l~-~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 113 KIDMITAVECAHWFDFEKFQR-SAYANLRKDGTIAIWG 149 (299)
T ss_dssp CEEEEEEESCGGGSCHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred CeeEEeHhhHHHHhCHHHHHH-HHHHhcCCCcEEEEEe
Confidence 9999999766 226777777 9999999999999854
No 119
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.46 E-value=3.8e-13 Score=110.79 Aligned_cols=140 Identities=22% Similarity=0.234 Sum_probs=94.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-----cccCCCcE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-----YRMLVGMV 214 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-----~~~~~~~f 214 (305)
.+.++.+|||+|||+|.++..+++.+++..+|+++|+|+ .. ...++.+++.|+.+.+. ......+|
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD--------PIVGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC--------CCTTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc--------ccCcEEEEEcccccchhhhhhhccCCCCce
Confidence 367889999999999999999999876667999999998 32 12689999999987631 00124689
Q ss_pred eEEEEeCCCh---hH-----------HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 215 DVIFSDVAQP---DQ-----------ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 215 D~V~~d~~~~---~~-----------~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
|+|+++.+.. .. ..++. ++.++|||||.+++++... ... ....+.+++. |+.++.
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~L~~gG~l~~~~~~~-----~~~----~~~~~~~~~~-~~~~~~ 158 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALE-MCRDVLAPGGSFVVKVFQG-----EGF----DEYLREIRSL-FTKVKV 158 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEEESS-----TTH----HHHHHHHHHH-EEEEEE
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHH-HHHHHcCCCcEEEEEEecC-----CcH----HHHHHHHHHh-hhhEEe
Confidence 9999987621 11 45565 8999999999999987311 111 1223344443 665554
Q ss_pred eec--CCCCCceEEEEEEEcC
Q 021911 281 VTL--EPFERDHACVVGGYRM 299 (305)
Q Consensus 281 ~~l--~p~~~~~~~vv~~~~~ 299 (305)
... ...+..+.++++...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~ 179 (180)
T 1ej0_A 159 RKPDSSRARSREVYIVATGRK 179 (180)
T ss_dssp ECCTTSCTTCCEEEEEEEEEC
T ss_pred ecCCcccccCceEEEEEccCC
Confidence 422 1233456667776655
No 120
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.46 E-value=1.6e-12 Score=118.14 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=100.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEeE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...+|||||||+|.++..+++.. +..+|++||+|+..++.+.+.... .+++++++.|+...... ...+||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK--FKNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG--CSSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--CCCCceE
Confidence 34899999999999999999874 456999999999766655554422 36899999998664322 2468999
Q ss_pred EEEeCCCh--------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCCC
Q 021911 217 IFSDVAQP--------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEPF 286 (305)
Q Consensus 217 V~~d~~~~--------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p~ 286 (305)
|++|++.+ .+.+++. ++.++|||||.|++.+ ++... ....+...++.|++. |...+.. .+..|
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~-~~~~~LkpgG~lv~~~--~~~~~---~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~ 239 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQ-ACYDALKEDGVFSAET--EDPFY---DIGWFKLAYRRISKV-FPITRVYLGFMTTY 239 (296)
T ss_dssp EEEEC----------CCSHHHHH-HHHHHEEEEEEEEEEC--CCTTT---THHHHHHHHHHHHHH-CSEEEEEEEECTTS
T ss_pred EEEcCCCcccCchhhhhHHHHHH-HHHHhcCCCcEEEEEc--cCccc---CHHHHHHHHHHHHHH-CCceEEEEeecCcc
Confidence 99998765 2356676 9999999999999986 22111 122344445666655 6655543 34445
Q ss_pred -CCceEEEEEEEcCC
Q 021911 287 -ERDHACVVGGYRMP 300 (305)
Q Consensus 287 -~~~~~~vv~~~~~~ 300 (305)
.....++++.++..
T Consensus 240 p~g~~~f~~as~~~~ 254 (296)
T 1inl_A 240 PSGMWSYTFASKGID 254 (296)
T ss_dssp TTSEEEEEEEESSCC
T ss_pred CCCceEEEEecCCCC
Confidence 45566777876533
No 121
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.46 E-value=4.7e-13 Score=117.76 Aligned_cols=106 Identities=15% Similarity=0.249 Sum_probs=80.1
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc--------CCCeEEEEccCCCCcccccCCC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK--------RTNVIPIIEDARHPAKYRMLVG 212 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~--------~~nI~~~~~D~~~~~~~~~~~~ 212 (305)
..+..+|||||||+|.++..+|... +...|++||+|+.++..+.+.++. ..||.+++.|+....+..+...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 4567899999999999999999875 567999999999766655444331 2689999999987322112357
Q ss_pred cEeEEEEeCCChhH-----------HHHHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVAQPDQ-----------ARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~~~~~-----------~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+||+|+++.+.|.. ..++. ++.++|||||.|++++
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~-~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLA-EYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHH-HHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHH-HHHHHCCCCCEEEEEe
Confidence 99999998876542 35666 8999999999999987
No 122
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=2.5e-13 Score=118.86 Aligned_cols=133 Identities=23% Similarity=0.265 Sum_probs=88.6
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
+.++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.+.+.++.. .++.+++.|+.+... ....++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP-TLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG-GSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhc-ccCCCceEEEEE
Confidence 567899999999999999999775 2348999999996665555555433 579999999876521 123578999999
Q ss_pred e-CC-------ChhHHHHHHHHHhccCCCCcEEEEEEcccc---cCCC-CchhhhH-HHHHHHHHHCCCcE
Q 021911 220 D-VA-------QPDQARILALNASYFLKAGGHFVISIKANC---IDST-VPAEAVF-QSEVKKLQQDQFKP 277 (305)
Q Consensus 220 d-~~-------~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~---i~~~-~~~~~v~-~~~~~~l~~~Gf~~ 277 (305)
| .+ ..+...++. +++++|||||+|++...... .... ......+ ...+..|+++||+.
T Consensus 135 d~~~~~~~~~~~~~~~~~l~-~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKN-HAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHH-THHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CCcccchhhhhhhhHHHHHH-HHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 2 21 122334565 89999999999998752110 0011 1111122 22356778999984
No 123
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.45 E-value=7.6e-13 Score=118.93 Aligned_cols=105 Identities=24% Similarity=0.251 Sum_probs=81.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..++.. +..+|+++|+|+.++..+.+.+... .++.+++.|+.+.+.. ...+||+
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~ 136 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD--LGKEFDV 136 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC--CSSCEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC--CCCCcCE
Confidence 3578899999999999999998886 4559999999996666555555443 3689999999876421 2568999
Q ss_pred EEEeCCC-------hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 217 IFSDVAQ-------PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 217 V~~d~~~-------~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
|+++... ++...++. ++.++|||||+|+++++
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQR-NIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHH-HHHHTEEEEEEEEEEEE
T ss_pred EEECchhhhhcCCHHHHHHHHH-HHHHhcCCCCEEEEEEC
Confidence 9997552 34556666 99999999999999874
No 124
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.45 E-value=1.6e-12 Score=113.38 Aligned_cols=99 Identities=23% Similarity=0.301 Sum_probs=77.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
+.++.+|||+|||+|.++..+++. .+|+++|+|+.+++.+.+.+... .++.+++.|+...+ ...+||+|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----~~~~fD~v~~ 102 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE----LPEPVDAITI 102 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC----CSSCEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC----CCCCcCEEEE
Confidence 456799999999999999998876 48999999996666555554433 57999999987653 2368999998
Q ss_pred eC-C-----C-hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DV-A-----Q-PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~-~-----~-~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.. + . .+...++. ++.++|||||+|++++
T Consensus 103 ~~~~~~~~~~~~~~~~~l~-~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFD-SAARLLTDGGKLLFDV 137 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHH-HHHHhcCCCeEEEEEc
Confidence 64 2 1 34555665 9999999999999965
No 125
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.45 E-value=1.4e-12 Score=111.32 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=80.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
+.++.+|||+|||+|.++..+++. +. .+|+++|+|+.++..+.+.+...+++.+++.|+.+.+ ....+||+|+++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~ 114 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD---FPSASFDVVLEK 114 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC---SCSSCEEEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC---CCCCcccEEEEC
Confidence 467899999999999999999987 23 3899999999666555555544468999999998763 234689999987
Q ss_pred CCC------------------hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 221 VAQ------------------PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 221 ~~~------------------~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.+. .+...++. ++.++|||||+|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 115 GTLDALLAGERDPWTVSSEGVHTVDQVLS-EVSRVLVPGGRFISMT 159 (215)
T ss_dssp SHHHHHTTTCSCTTSCCHHHHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred cchhhhccccccccccccchhHHHHHHHH-HHHHhCcCCCEEEEEe
Confidence 651 13456666 9999999999999998
No 126
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.45 E-value=4.4e-12 Score=115.69 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=102.5
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH------cCCCeEEEEccCCCCcccccCCCcEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK------KRTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~------~~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.+..+|||||||+|.++..+++.. +..+|++||+|+..++.+.+.+. ..+++.+++.|+...... ....+||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ-TPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS-SCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh-ccCCcee
Confidence 456899999999999999999863 45699999999966555554432 126899999998765321 0246899
Q ss_pred EEEEeCCChhH-------HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEee--cCCC
Q 021911 216 VIFSDVAQPDQ-------ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT--LEPF 286 (305)
Q Consensus 216 ~V~~d~~~~~~-------~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~--l~p~ 286 (305)
+|++|.+.+.. .+++. ++.++|||||.|++... +... ....+....+.|++.||..++... +..|
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~-~~~~~LkpgG~lv~~~~--~~~~---~~~~~~~~~~~l~~~GF~~v~~~~~~vP~y 245 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYK-DVLRILKPDGICCNQGE--SIWL---DLELIEKMSRFIRETGFASVQYALMHVPTY 245 (304)
T ss_dssp EEEEECC---------CCHHHHH-HHHHHEEEEEEEEEEEC--CTTT---CHHHHHHHHHHHHHHTCSEEEEEECCCTTS
T ss_pred EEEECCCCccccchhhhHHHHHH-HHHHhcCCCcEEEEecC--Cccc---chHHHHHHHHHHHhCCCCcEEEEEeecccc
Confidence 99999874431 45666 99999999999999862 2111 112334446777888998776553 3444
Q ss_pred -CCceEEEEEEEc
Q 021911 287 -ERDHACVVGGYR 298 (305)
Q Consensus 287 -~~~~~~vv~~~~ 298 (305)
...+.++++.+.
T Consensus 246 p~g~w~f~~as~~ 258 (304)
T 3bwc_A 246 PCGSIGTLVCSKK 258 (304)
T ss_dssp TTSCCEEEEEESS
T ss_pred cCcceEEEEEeCC
Confidence 345566777764
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.45 E-value=4.3e-13 Score=117.20 Aligned_cols=137 Identities=18% Similarity=0.176 Sum_probs=92.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHH---HcC------CCeEEEEccCCCCcccccCC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMA---KKR------TNVIPIIEDARHPAKYRMLV 211 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a---~~~------~nI~~~~~D~~~~~~~~~~~ 211 (305)
.+++.+|||||||+|.++..+|... +..+|++||+|+. .|++.| +++ +||.+++.|+...+.. ..
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~---~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~--~~ 95 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKE---NLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFE--LK 95 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCG---GGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGG--GT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHH---HHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhh--cc
Confidence 4678999999999999999999753 5678999999943 343333 322 5899999999887432 23
Q ss_pred CcEeEEEEeCCChhH--------HHHHHHHHhccCCCCcEEEEEEccccc-CC--------CCchhhhHHH--HHHHHHH
Q 021911 212 GMVDVIFSDVAQPDQ--------ARILALNASYFLKAGGHFVISIKANCI-DS--------TVPAEAVFQS--EVKKLQQ 272 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~--------~~~l~~~a~~~LkpGG~lv~s~~~~~i-~~--------~~~~~~v~~~--~~~~l~~ 272 (305)
+.||.|+++++.+.. ..++. +++++|||||+|++++..... .. .......+.. ....+++
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~-~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 174 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILS-NVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSN 174 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHH-HHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHH
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHH-HHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHH
Confidence 789999999886542 34566 899999999999994411110 00 0000111122 2455678
Q ss_pred CCCcEeEEeecC
Q 021911 273 DQFKPFEQVTLE 284 (305)
Q Consensus 273 ~Gf~~~e~~~l~ 284 (305)
+||++.+...+.
T Consensus 175 aGf~v~~~~~~~ 186 (225)
T 3p2e_A 175 SGFRIDDVKELD 186 (225)
T ss_dssp HTCEEEEEEEEC
T ss_pred cCCCeeeeeecC
Confidence 899988876554
No 128
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=1.8e-12 Score=107.70 Aligned_cols=132 Identities=13% Similarity=0.082 Sum_probs=96.9
Q ss_pred hHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCC
Q 021911 126 SKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARH 203 (305)
Q Consensus 126 s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~ 203 (305)
..+...++..+ .+.++.+|||+|||+|.++..++. +..+|+++|+|+.+++.+.+.++.. +++.+++.|+.+
T Consensus 21 ~~~~~~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 21 EEIRAVSIGKL---NLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHHHHHH---CCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred HHHHHHHHHHc---CCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 34444554333 467789999999999999999998 3569999999997666666655544 579999999876
Q ss_pred CcccccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 204 PAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 204 ~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
.. ...+||+|+++.+ .+...++. ++.++ |+|.|++++. . ...+....+.+++.||.+...
T Consensus 95 ~~----~~~~~D~i~~~~~-~~~~~~l~-~~~~~--~gG~l~~~~~--~-------~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 95 VL----DKLEFNKAFIGGT-KNIEKIIE-ILDKK--KINHIVANTI--V-------LENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp HG----GGCCCSEEEECSC-SCHHHHHH-HHHHT--TCCEEEEEES--C-------HHHHHHHHHHHHHTTCEEEEE
T ss_pred cc----cCCCCcEEEECCc-ccHHHHHH-HHhhC--CCCEEEEEec--c-------cccHHHHHHHHHHcCCeEEEE
Confidence 32 1368999999988 66677776 77777 9999999872 1 122344567778889876543
No 129
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.44 E-value=3.4e-13 Score=117.68 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=86.2
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++.+ +..+|+++|+|+..++.+.+.++.. .+|.+++.|+....+......+||+
T Consensus 51 ~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 51 KMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred hccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccE
Confidence 35577899999999999999999986 4679999999996666655555443 4699999998775322111368999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.+.+++..++. ++.++|||||.|++.+
T Consensus 130 I~~~~~~~~~~~~l~-~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAAKGQYRRFFD-MYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGGGSCHHHHHH-HHGGGEEEEEEEEEET
T ss_pred EEECCCHHHHHHHHH-HHHHHcCCCeEEEEEc
Confidence 999999888888887 9999999999999974
No 130
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.44 E-value=8.2e-13 Score=122.07 Aligned_cols=149 Identities=11% Similarity=-0.034 Sum_probs=98.8
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C--CeEEEEccCCCCcccc-cCCCcEeE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T--NVIPIIEDARHPAKYR-MLVGMVDV 216 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~--nI~~~~~D~~~~~~~~-~~~~~fD~ 216 (305)
.++.+|||+|||+|.++..++.. .. +|++||+|+.+++.+.++++.. . ++.+++.|+.+..... ....+||+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~--ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA--GA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCCcEEEcccccCHHHHHHHHc--CC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 46789999999999999999986 23 9999999997776666665543 2 4999999987654210 01358999
Q ss_pred EEEeCCC-------------hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHH-HHHHCCCcEeEEe-
Q 021911 217 IFSDVAQ-------------PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVK-KLQQDQFKPFEQV- 281 (305)
Q Consensus 217 V~~d~~~-------------~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~-~l~~~Gf~~~e~~- 281 (305)
|++|+|. .+..+++. ++.++|||||.|+++. .|... . ....|.+.+. .+++.|+++....
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~-~~~~~LkpgG~lli~~--~~~~~-~-~~~~~~~~l~~a~~~~g~~v~~~e~ 303 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLD-ICREILSPKALGLVLT--AYSIR-A-SFYSMHELMRETMRGAGGVVASGEL 303 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHH-HHHHTBCTTCCEEEEE--ECCTT-S-CHHHHHHHHHHHTTTSCSEEEEEEE
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHH-HHHHhcCcCcEEEEEE--CCCCC-C-CHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 9999983 12456666 8999999999988765 23211 1 2233444443 3456788765322
Q ss_pred ecCCCC-----CceEEEEEEEc
Q 021911 282 TLEPFE-----RDHACVVGGYR 298 (305)
Q Consensus 282 ~l~p~~-----~~~~~vv~~~~ 298 (305)
.+.... ....+..+.|.
T Consensus 304 ~~p~~~~~q~~~~r~lp~g~~~ 325 (332)
T 2igt_A 304 VIREAGLDGKTPGRVLSTSLFS 325 (332)
T ss_dssp EEECCCSSSCCCCCEEEEEEEE
T ss_pred ecccCCcccccCCceeeeEEEE
Confidence 222222 35555555554
No 131
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.44 E-value=2.2e-12 Score=112.57 Aligned_cols=142 Identities=15% Similarity=0.079 Sum_probs=104.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.++++.+|||+|||+|..+..+|.. ++..+|+|+|+++.++..+.++++.. .+|++++.|..+..+. ...||+
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~---~~~~D~ 87 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE---TDQVSV 87 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCE
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---CcCCCE
Confidence 4678899999999999999999987 45678999999998777777777665 3699999998654321 126998
Q ss_pred EEE-eCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEE
Q 021911 217 IFS-DVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 295 (305)
Q Consensus 217 V~~-d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~ 295 (305)
|++ .+.-..-.+++. .+...|+++++|+++.. ... ....++|.++||.+.+..-+..-.+-|-++++
T Consensus 88 IviaG~Gg~~i~~Il~-~~~~~L~~~~~lVlq~~-------~~~----~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~ 155 (225)
T 3kr9_A 88 ITIAGMGGRLIARILE-EGLGKLANVERLILQPN-------NRE----DDLRIWLQDHGFQIVAESILEEAGKFYEILVV 155 (225)
T ss_dssp EEEEEECHHHHHHHHH-HTGGGCTTCCEEEEEES-------SCH----HHHHHHHHHTTEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEcCCChHHHHHHHH-HHHHHhCCCCEEEEECC-------CCH----HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEE
Confidence 875 444444677777 89999999999999861 112 22257888999999876555444444556666
Q ss_pred EE
Q 021911 296 GY 297 (305)
Q Consensus 296 ~~ 297 (305)
.+
T Consensus 156 ~~ 157 (225)
T 3kr9_A 156 EA 157 (225)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 132
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.44 E-value=2e-13 Score=119.01 Aligned_cols=105 Identities=12% Similarity=0.173 Sum_probs=85.3
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
++..+|||+|||+|..+..+|+.+.+.++|++||+|+.+++.+.+.+++. ++|.+++.|+.+..+. ....+||+|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~-~~~~~fD~V 133 (221)
T 3dr5_A 55 NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR-LANDSYQLV 133 (221)
T ss_dssp TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG-SCTTCEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH-hcCCCcCeE
Confidence 34569999999999999999998866789999999997766666555542 3799999998665322 124799999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|....+....+. .+.++|||||.|++..
T Consensus 134 ~~d~~~~~~~~~l~-~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 134 FGQVSPMDLKALVD-AAWPLLRRGGALVLAD 163 (221)
T ss_dssp EECCCTTTHHHHHH-HHHHHEEEEEEEEETT
T ss_pred EEcCcHHHHHHHHH-HHHHHcCCCcEEEEeC
Confidence 99998888777887 9999999999999854
No 133
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.44 E-value=1.8e-13 Score=114.72 Aligned_cols=123 Identities=12% Similarity=0.016 Sum_probs=88.1
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEE
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPI 197 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~ 197 (305)
..|....+...++..+. ...++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.+.+.++.. ++++++
T Consensus 24 ~rp~~~~~~~~~~~~l~--~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 99 (187)
T 2fhp_A 24 TRPTTDKVKESIFNMIG--PYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVR 99 (187)
T ss_dssp SCCCCHHHHHHHHHHHC--SCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred cCcCHHHHHHHHHHHHH--hhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEE
Confidence 44555666666665443 2356789999999999999998885 4569999999996666655555433 479999
Q ss_pred EccCCCCccc-ccCCCcEeEEEEeCCC--hhHHHHHHHHH--hccCCCCcEEEEEE
Q 021911 198 IEDARHPAKY-RMLVGMVDVIFSDVAQ--PDQARILALNA--SYFLKAGGHFVISI 248 (305)
Q Consensus 198 ~~D~~~~~~~-~~~~~~fD~V~~d~~~--~~~~~~l~~~a--~~~LkpGG~lv~s~ 248 (305)
+.|+.+.... .....+||+|+++++. .+....+. .+ .++|||||.|++++
T Consensus 100 ~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~-~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 100 KMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLE-KMLERQLLTNEAVIVCET 154 (187)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHH-HHHHTTCEEEEEEEEEEE
T ss_pred ECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHH-HHHHhcccCCCCEEEEEe
Confidence 9998764321 1114689999999882 23334443 44 88999999999987
No 134
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=1.9e-12 Score=113.82 Aligned_cols=101 Identities=19% Similarity=0.186 Sum_probs=78.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
...++.+|||+|||+|.++..+++. ..+|+++|+|+.++..+.+.+... .++.+++.|+.+.+. ..+||+|+
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~ 110 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF----KNEFDAVT 110 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC----CSCEEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc----CCCccEEE
Confidence 4567789999999999999999986 358999999996666655555443 479999999977542 36899999
Q ss_pred EeCC-----C-hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 219 SDVA-----Q-PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 219 ~d~~-----~-~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+... . .+...++. ++.++|||||.|++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~l~-~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFSTIMYFDEEDLRKLFS-KVAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSGGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred EcCCchhcCCHHHHHHHHH-HHHHHcCCCeEEEEec
Confidence 8533 1 34556666 9999999999999865
No 135
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=1.6e-13 Score=117.51 Aligned_cols=120 Identities=13% Similarity=0.037 Sum_probs=83.4
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEE
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPII 198 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~ 198 (305)
|....+...++..+.. ..++.+|||+|||+|.++..++.. ...+|++||+|+.+++.+.+.++.. +++.+++
T Consensus 35 p~~~~~~~~l~~~l~~--~~~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~ 110 (201)
T 2ift_A 35 PTGDRVKETLFNWLMP--YIHQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN 110 (201)
T ss_dssp ---CHHHHHHHHHHHH--HHTTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC
T ss_pred cCHHHHHHHHHHHHHH--hcCCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEE
Confidence 3344444444443321 126789999999999999987766 2358999999997766666655543 4799999
Q ss_pred ccCCCCcccccCCCc-EeEEEEeCC--ChhHHHHHHHHH--hccCCCCcEEEEEE
Q 021911 199 EDARHPAKYRMLVGM-VDVIFSDVA--QPDQARILALNA--SYFLKAGGHFVISI 248 (305)
Q Consensus 199 ~D~~~~~~~~~~~~~-fD~V~~d~~--~~~~~~~l~~~a--~~~LkpGG~lv~s~ 248 (305)
.|+.+.... ....+ ||+|++|++ ..+...++. .+ .++|||||.|++++
T Consensus 111 ~d~~~~~~~-~~~~~~fD~I~~~~~~~~~~~~~~l~-~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 111 QSSLDFLKQ-PQNQPHFDVVFLDPPFHFNLAEQAIS-LLCENNWLKPNALIYVET 163 (201)
T ss_dssp SCHHHHTTS-CCSSCCEEEEEECCCSSSCHHHHHHH-HHHHTTCEEEEEEEEEEE
T ss_pred CCHHHHHHh-hccCCCCCEEEECCCCCCccHHHHHH-HHHhcCccCCCcEEEEEE
Confidence 998654321 11457 999999998 334445555 66 67899999999987
No 136
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.44 E-value=2.2e-13 Score=119.91 Aligned_cols=101 Identities=19% Similarity=0.254 Sum_probs=80.2
Q ss_pred CCCEEEEEecCCCccHHHHHhh---hCCCcEEEEEeCChHHHHHHHHHHHc-CCCeEEEEccCCCCcccccCC-CcEeEE
Q 021911 143 PGARVLYLGAASGTTVSHVSDI---VGPNGVVYAVEFSHRSGRDLVNMAKK-RTNVIPIIEDARHPAKYRMLV-GMVDVI 217 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~---~~~~~~V~avD~s~~~~~~l~~~a~~-~~nI~~~~~D~~~~~~~~~~~-~~fD~V 217 (305)
+..+|||||||+|..+..+|+. +.+.++|++||+|+ .+++.++. .++|++++.|+.+........ .+||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~----~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDL----SRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCC----TTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCCh----HHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 4689999999999999999997 45678999999999 55444433 268999999998752111122 379999
Q ss_pred EEeCCChhHHHHHHHHHhc-cCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASY-FLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~-~LkpGG~lv~s~ 248 (305)
+++..+.+...++. ++.+ +|||||+|++..
T Consensus 157 ~~d~~~~~~~~~l~-~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNAHANTFNIMK-WAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESSCSSHHHHHH-HHHHHTCCTTCEEEECS
T ss_pred EECCchHhHHHHHH-HHHHhhCCCCCEEEEEe
Confidence 99998777777776 8886 999999999975
No 137
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.44 E-value=2.9e-12 Score=112.15 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=106.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.++++.+|||+|||+|..+..++.. ++..+|+|+|+++.+++.+.++++.. .+|++++.|..+.... ...||+
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~---~~~~D~ 93 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE---ADNIDT 93 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---ccccCE
Confidence 4678899999999999999999987 45668999999997777777776655 4699999998765421 237998
Q ss_pred EE-EeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEE
Q 021911 217 IF-SDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 295 (305)
Q Consensus 217 V~-~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~ 295 (305)
|+ +.+--..-.+++. .+...|+++++|+++.. ... ....++|.++||.+.+..-+..-.+-|-++++
T Consensus 94 IviaGmGg~lI~~IL~-~~~~~l~~~~~lIlqp~-------~~~----~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~ 161 (230)
T 3lec_A 94 ITICGMGGRLIADILN-NDIDKLQHVKTLVLQPN-------NRE----DDLRKWLAANDFEIVAEDILTENDKRYEILVV 161 (230)
T ss_dssp EEEEEECHHHHHHHHH-HTGGGGTTCCEEEEEES-------SCH----HHHHHHHHHTTEEEEEEEEEEC--CEEEEEEE
T ss_pred EEEeCCchHHHHHHHH-HHHHHhCcCCEEEEECC-------CCh----HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEE
Confidence 76 5665666777777 88999999999999861 112 22357888999999887666555555666666
Q ss_pred EEc
Q 021911 296 GYR 298 (305)
Q Consensus 296 ~~~ 298 (305)
.+.
T Consensus 162 ~~~ 164 (230)
T 3lec_A 162 KHG 164 (230)
T ss_dssp EEC
T ss_pred EeC
Confidence 654
No 138
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.43 E-value=5.7e-13 Score=115.50 Aligned_cols=102 Identities=25% Similarity=0.317 Sum_probs=81.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-------CCCeEEEEccCCCCcccccCCC
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-------RTNVIPIIEDARHPAKYRMLVG 212 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-------~~nI~~~~~D~~~~~~~~~~~~ 212 (305)
.++++.+|||+|||+|.++.++++.+++.++|+++|+|+.+++.+.+.+.. ..++.+++.|+..... ...
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~ 150 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA---EEA 150 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG---GGC
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc---cCC
Confidence 367889999999999999999999887667999999999776666555543 3589999999875432 246
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+||+|+++.+++.. +. ++.++|||||+|++++
T Consensus 151 ~fD~i~~~~~~~~~---~~-~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 151 PYDAIHVGAAAPVV---PQ-ALIDQLKPGGRLILPV 182 (226)
T ss_dssp CEEEEEECSBBSSC---CH-HHHHTEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH---HH-HHHHhcCCCcEEEEEE
Confidence 89999998886432 23 6778999999999998
No 139
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=1.6e-12 Score=114.72 Aligned_cols=106 Identities=15% Similarity=0.195 Sum_probs=82.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc----------CCCeEEEEccCCCCcccccC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK----------RTNVIPIIEDARHPAKYRML 210 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~----------~~nI~~~~~D~~~~~~~~~~ 210 (305)
+.++.+|||+|||+|.++..+|... +...|++||+|+.++..+.+.++. .+|+.+++.|+.+..+....
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 4567899999999999999999985 567999999999776666555432 26899999999874332233
Q ss_pred CCcEeEEEEeCCChhH-----------HHHHHHHHhccCCCCcEEEEEE
Q 021911 211 VGMVDVIFSDVAQPDQ-----------ARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~~-----------~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
...+|.|+++.+.+.. ..++. ++.++|||||.|++.+
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~-~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLS-EYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHH-HHHHHEEEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHH-HHHHHcCCCCEEEEEe
Confidence 5789999988775542 45666 8999999999999986
No 140
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.43 E-value=4e-13 Score=116.84 Aligned_cols=132 Identities=14% Similarity=0.107 Sum_probs=92.6
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccC
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDA 201 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~ 201 (305)
|....+...++.. .+.++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++ +++.+++.|+
T Consensus 32 ~~~~~l~~~~~~~----~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~d~ 100 (226)
T 3m33_A 32 PDPELTFDLWLSR----LLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSP----ELLKLARANAPHADVYEWNG 100 (226)
T ss_dssp SCTTHHHHHHHHH----HCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCH----HHHHHHHHHCTTSEEEECCS
T ss_pred CCHHHHHHHHHHh----cCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCH----HHHHHHHHhCCCceEEEcch
Confidence 4455566655421 2467899999999999999999987 35999999999 555555543 7899999999
Q ss_pred CCCcccccC-CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 202 RHPAKYRML-VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 202 ~~~~~~~~~-~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
.+..+. . .++||+|+++. ++..++. ++.++|||||+|+... .. ... ....+.+++.||+..+.
T Consensus 101 ~~~~~~--~~~~~fD~v~~~~---~~~~~l~-~~~~~LkpgG~l~~~~---~~---~~~----~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 101 KGELPA--GLGAPFGLIVSRR---GPTSVIL-RLPELAAPDAHFLYVG---PR---LNV----PEVPERLAAVGWDIVAE 164 (226)
T ss_dssp CSSCCT--TCCCCEEEEEEES---CCSGGGG-GHHHHEEEEEEEEEEE---SS---SCC----THHHHHHHHTTCEEEEE
T ss_pred hhccCC--cCCCCEEEEEeCC---CHHHHHH-HHHHHcCCCcEEEEeC---Cc---CCH----HHHHHHHHHCCCeEEEE
Confidence 643322 2 46999999983 4455565 8889999999999332 11 111 12245667888887654
Q ss_pred e
Q 021911 281 V 281 (305)
Q Consensus 281 ~ 281 (305)
.
T Consensus 165 ~ 165 (226)
T 3m33_A 165 D 165 (226)
T ss_dssp E
T ss_pred E
Confidence 3
No 141
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.43 E-value=3.4e-12 Score=109.93 Aligned_cols=133 Identities=14% Similarity=0.110 Sum_probs=94.0
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
.++.+|||+|||+|.++..+++. + .+|+++|+|+ .+++.++++ ...+++.|+.+... .....+||+|++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~----~~~~~~~~~-~~~~~~~d~~~~~~-~~~~~~fD~v~~~~ 101 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFP----EAAEQAKEK-LDHVVLGDIETMDM-PYEEEQFDCVIFGD 101 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSH----HHHHHHHTT-SSEEEESCTTTCCC-CSCTTCEEEEEEES
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCH----HHHHHHHHh-CCcEEEcchhhcCC-CCCCCccCEEEECC
Confidence 57899999999999999999987 3 6999999999 667777654 24788899876321 12346899999876
Q ss_pred C---ChhHHHHHHHHHhccCCCCcEEEEEEccccc----------CCCCc------h---hh-hHHHHHHHHHHCCCcEe
Q 021911 222 A---QPDQARILALNASYFLKAGGHFVISIKANCI----------DSTVP------A---EA-VFQSEVKKLQQDQFKPF 278 (305)
Q Consensus 222 ~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i----------~~~~~------~---~~-v~~~~~~~l~~~Gf~~~ 278 (305)
. .++...++. ++.++|||||+++++++.... ..... . .. -..+..+.++++||+++
T Consensus 102 ~l~~~~~~~~~l~-~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 180 (230)
T 3cc8_A 102 VLEHLFDPWAVIE-KVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSIS 180 (230)
T ss_dssp CGGGSSCHHHHHH-HTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEE
T ss_pred hhhhcCCHHHHHH-HHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEE
Confidence 5 345667777 999999999999998743210 00000 0 00 11223456688999998
Q ss_pred EEeecC
Q 021911 279 EQVTLE 284 (305)
Q Consensus 279 e~~~l~ 284 (305)
++..+.
T Consensus 181 ~~~~~~ 186 (230)
T 3cc8_A 181 KVDRVY 186 (230)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 876543
No 142
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.43 E-value=1.7e-12 Score=115.68 Aligned_cols=111 Identities=13% Similarity=0.127 Sum_probs=81.2
Q ss_pred cccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChH------HHHHHHHHHHcC---CCeEEEEcc-CCCCcc
Q 021911 137 DNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHR------SGRDLVNMAKKR---TNVIPIIED-ARHPAK 206 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~------~~~~l~~~a~~~---~nI~~~~~D-~~~~~~ 206 (305)
+.+.+.++.+|||||||+|.++..+++.+++..+|+++|+|+. ++..+.+.++.. ++|.+++.| +....
T Consensus 37 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 115 (275)
T 3bkx_A 37 EAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDL- 115 (275)
T ss_dssp HHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCC-
T ss_pred HHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhcc-
Confidence 3346788999999999999999999998766679999999985 555555555443 479999998 32221
Q ss_pred cccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 207 YRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
......+||+|++..+ .++...++. .+..+++|||+|++++.
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~-~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASANALAL-LFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCHHHHHH-HHHHHTTTCSEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhhCCCHHHHHH-HHHHHhCCCCEEEEEEe
Confidence 1123578999999766 234444443 67777888999999873
No 143
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=5.7e-13 Score=125.12 Aligned_cols=103 Identities=15% Similarity=0.050 Sum_probs=81.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-----CCeEEEEccCCCCcccccCCCcE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-----TNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-----~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
...++.+|||+|||+|.++..+++.. +..+|++||+|+.+++.+.++++.. .++.+++.|+.... ...+|
T Consensus 219 ~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~----~~~~f 293 (375)
T 4dcm_A 219 PENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV----EPFRF 293 (375)
T ss_dssp CCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC----CTTCE
T ss_pred cccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC----CCCCe
Confidence 45567899999999999999999985 5679999999997766666555543 26888999998743 24689
Q ss_pred eEEEEeCCCh--------hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQP--------DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~--------~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|++|+|.. ...+++. ++.++|||||.|+++.
T Consensus 294 D~Ii~nppfh~~~~~~~~~~~~~l~-~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 294 NAVLCNPPFHQQHALTDNVAWEMFH-HARRCLKINGELYIVA 334 (375)
T ss_dssp EEEEECCCC-------CCHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred eEEEECCCcccCcccCHHHHHHHHH-HHHHhCCCCcEEEEEE
Confidence 9999998832 2234565 9999999999999986
No 144
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=1.2e-12 Score=123.63 Aligned_cols=102 Identities=20% Similarity=0.155 Sum_probs=79.1
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.+++.+|||+|||+|.++.++|.. + ..|++||+|+.+++.+.++++.+ -...+++.|+.+.... ....||+|++
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~-g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~--~~~~fD~Ii~ 286 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK-G--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRG--LEGPFHHVLL 286 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHT--CCCCEEEEEE
T ss_pred hcCCCeEEEcccchhHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHH--hcCCCCEEEE
Confidence 456899999999999999999986 2 34999999997777666666543 2235668888765432 1345999999
Q ss_pred eCCC------------hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DVAQ------------PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~~~------------~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|+ .++.+++. .+.++|||||+|++++
T Consensus 287 dpP~f~~~~~~~~~~~~~~~~ll~-~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 287 DPPTLVKRPEELPAMKRHLVDLVR-EALRLLAEEGFLWLSS 326 (393)
T ss_dssp CCCCCCSSGGGHHHHHHHHHHHHH-HHHHTEEEEEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHH-HHHHhcCCCCEEEEEE
Confidence 9995 35567776 8999999999999887
No 145
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.42 E-value=1.5e-12 Score=117.23 Aligned_cols=140 Identities=14% Similarity=0.090 Sum_probs=87.1
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC------------------------------
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR------------------------------ 191 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~------------------------------ 191 (305)
.++.+|||||||+|.++..++.. ...+|+++|+|+.+++.+.+.+++.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 36789999999999955444443 2358999999996655444432211
Q ss_pred --CCeEEEEccCCCCccc---ccCCCcEeEEEEeCC-------ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCC-c
Q 021911 192 --TNVIPIIEDARHPAKY---RMLVGMVDVIFSDVA-------QPDQARILALNASYFLKAGGHFVISIKANCIDSTV-P 258 (305)
Q Consensus 192 --~nI~~~~~D~~~~~~~---~~~~~~fD~V~~d~~-------~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~-~ 258 (305)
..+.++++|+....+. ....++||+|++... .++...+|. ++.++|||||+|+++.......... .
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~-~~~r~LkpGG~l~~~~~~~~~~~~~~~ 226 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALD-HITTLLRPGGHLLLIGALEESWYLAGE 226 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHH-HHHTTEEEEEEEEEEEEESCCEEEETT
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHH-HHHHhcCCCCEEEEEEecCcceEEcCC
Confidence 0145777798773221 122457999999776 125667776 9999999999999975211100000 0
Q ss_pred ----hhhhHHHH-HHHHHHCCCcEeEEeecC
Q 021911 259 ----AEAVFQSE-VKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 259 ----~~~v~~~~-~~~l~~~Gf~~~e~~~l~ 284 (305)
....-.++ .+.|+++||++++...+.
T Consensus 227 ~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 227 ARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp EEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 00011222 466788999988766543
No 146
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.42 E-value=2.5e-12 Score=115.46 Aligned_cols=100 Identities=22% Similarity=0.177 Sum_probs=80.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+.+.+... .++.+++.|+..... ..+||+|++
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~i~~ 190 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI----QENYDFIVS 190 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC----CSCEEEEEE
T ss_pred ccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc----cCCccEEEE
Confidence 347899999999999999999987 248999999997666666655544 389999999977542 578999999
Q ss_pred eCC-----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DVA-----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.+ .++...++. ++.++|||||.|++.+
T Consensus 191 ~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIK-NMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHH-HHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHH-HHHHhcCCCcEEEEEE
Confidence 775 245567776 9999999999988876
No 147
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.41 E-value=3.7e-13 Score=126.58 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=81.0
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.++.+|||+|||+|.++..+++. ..+|++||+|+.+++.+.++++.. .++++++.|+.+.... ..+||+|++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~---~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTE---EARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCT---TCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcccc---CCCeEEEEEC
Confidence 46789999999999999999987 249999999997776666666554 3689999999876432 4699999999
Q ss_pred CCC--------hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 221 VAQ--------PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 221 ~~~--------~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+|. .+...++. ++.++|||||.|++++
T Consensus 306 pp~~~~~~~~~~~~~~~l~-~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVN-VAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred CchhhcccccHHHHHHHHH-HHHHhcCcCcEEEEEE
Confidence 872 23455665 9999999999999987
No 148
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.41 E-value=3.4e-13 Score=115.81 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=82.5
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+..+|||+|||+|..+.++++.+.+.++|+++|+|+.+++.+.+.++.. .+|++++.|+.+..+. ... ||+|+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~-fD~v~ 131 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG--QRD-IDILF 131 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT--CCS-EEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc--CCC-CCEEE
Confidence 45689999999999999999998754689999999996665555444332 3699999998654221 235 99999
Q ss_pred EeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 219 SDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 219 ~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++....+...++. ++.++|||||.|++..
T Consensus 132 ~~~~~~~~~~~l~-~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 132 MDCDVFNGADVLE-RMNRCLAKNALLIAVN 160 (210)
T ss_dssp EETTTSCHHHHHH-HHGGGEEEEEEEEEES
T ss_pred EcCChhhhHHHHH-HHHHhcCCCeEEEEEC
Confidence 9988888888887 9999999999999864
No 149
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=2.4e-12 Score=121.22 Aligned_cols=134 Identities=17% Similarity=0.163 Sum_probs=95.0
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C--CeEEEEccCCCCccc-ccCCCcEeE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T--NVIPIIEDARHPAKY-RMLVGMVDV 216 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~--nI~~~~~D~~~~~~~-~~~~~~fD~ 216 (305)
.++.+|||+|||+|.++.++|.. ...+|++||+|+.+++.+.++++.+ . ++++++.|+.+..+. .....+||+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 56789999999999999999985 2348999999998888877777665 3 899999998764321 111358999
Q ss_pred EEEeCCCh------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHH-HHHHHCCCcEeEEeec
Q 021911 217 IFSDVAQP------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEV-KKLQQDQFKPFEQVTL 283 (305)
Q Consensus 217 V~~d~~~~------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~-~~l~~~Gf~~~e~~~l 283 (305)
|++|+|.. +..+++. .+.++|+|+|.|++++ |+ .. . ....|.+.+ ..+.+.+.++++....
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~-~~~~~L~pgG~l~~~~--~~-~~-~-~~~~~~~~i~~~~~~~g~~~~~~~~~ 362 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIR-QGLEILSENGLIIAST--NA-AN-M-TVSQFKKQIEKGFGKQKHTYLDLQQL 362 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHH-HHHHTEEEEEEEEEEE--CC-TT-S-CHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHH-HHHHhcCCCcEEEEEe--CC-Cc-C-CHHHHHHHHHHHHHHcCCcEEEeCCC
Confidence 99999852 2334555 7889999999999997 22 11 1 122333443 3446677776555543
No 150
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.41 E-value=3.5e-13 Score=115.53 Aligned_cols=120 Identities=11% Similarity=0.037 Sum_probs=84.0
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEc
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIE 199 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~ 199 (305)
+|....+...++..+.. ..++.+|||+|||+|.++..++... ..+|++||+|+.+++.+.+.++.. +++++++.
T Consensus 35 rp~~~~~~~~l~~~l~~--~~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~ 110 (202)
T 2fpo_A 35 RPTTDRVRETLFNWLAP--VIVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNS 110 (202)
T ss_dssp ---CHHHHHHHHHHHHH--HHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCHHHHHHHHHHHHHh--hcCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEEC
Confidence 44455555555544331 1267899999999999999877762 348999999997766666665544 48999999
Q ss_pred cCCCCcccccCCCcEeEEEEeCC-C-hhHHHHHHHHHh--ccCCCCcEEEEEE
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVA-Q-PDQARILALNAS--YFLKAGGHFVISI 248 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~-~-~~~~~~l~~~a~--~~LkpGG~lv~s~ 248 (305)
|+.+..+. ...+||+|++|++ . .+...++. .+. ++|||+|.|++++
T Consensus 111 D~~~~~~~--~~~~fD~V~~~~p~~~~~~~~~l~-~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 111 NAMSFLAQ--KGTPHNIVFVDPPFRRGLLEETIN-LLEDNGWLADEALIYVES 160 (202)
T ss_dssp CHHHHHSS--CCCCEEEEEECCSSSTTTHHHHHH-HHHHTTCEEEEEEEEEEE
T ss_pred CHHHHHhh--cCCCCCEEEECCCCCCCcHHHHHH-HHHhcCccCCCcEEEEEE
Confidence 98664321 2468999999998 2 34444554 553 4699999999987
No 151
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.40 E-value=6.2e-12 Score=115.34 Aligned_cols=147 Identities=16% Similarity=0.142 Sum_probs=102.4
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+..+|||+|||+|.++..+++.+ +..+++++|+| ..++.+.+...+. .+|.+++.|+.+.+. ...||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY----GNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC----CSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC----CCCCcEEE
Confidence 677999999999999999999986 56799999999 7776666555432 469999999987531 34599999
Q ss_pred EeCC---C--hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhh-h----------------HHHHHHHHHHCCCc
Q 021911 219 SDVA---Q--PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEA-V----------------FQSEVKKLQQDQFK 276 (305)
Q Consensus 219 ~d~~---~--~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~-v----------------~~~~~~~l~~~Gf~ 276 (305)
+... . ++..+++. ++.+.|||||+|++...........+... . ..+..+.++++||+
T Consensus 238 ~~~~l~~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLR-KIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp EESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred EcchhccCCHHHHHHHHH-HHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 9544 1 34456776 99999999999999873221111111110 0 11224556889999
Q ss_pred EeEEeecCCCCCceEEEEEEEc
Q 021911 277 PFEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 277 ~~e~~~l~p~~~~~~~vv~~~~ 298 (305)
.+++..+.. .+.++++.|+
T Consensus 317 ~~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 317 HSQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp EEEEECCTT---SSSEEEEEEC
T ss_pred eeeEEECCC---CceeEEEecC
Confidence 998775533 3466777664
No 152
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.40 E-value=1e-11 Score=112.81 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=97.5
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-------CCCeEEEEccCCCCcccccCCCcE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-------RTNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-------~~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
.+..+|||||||+|..+..+++.. +..+|++||+|+..++.+.+.... .+++++++.|+...... ..++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CCCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cCCCc
Confidence 345899999999999999999873 456899999999665555444321 25899999999876432 24689
Q ss_pred eEEEEeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCC
Q 021911 215 DVIFSDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEP 285 (305)
Q Consensus 215 D~V~~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p 285 (305)
|+|++|++.+. ..+.+. .+.+.|||||.|++.+ .+.... ...+....+.+++. |...... .+..
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~-~~~~~LkpgG~lv~~~--~s~~~~---~~~~~~~~~~l~~~-F~~v~~~~~~vp~ 231 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYE-GCKRCLNPGGIFVAQN--GVCFLQ---QEEAIDSHRKLSHY-FSDVGFYQAAIPT 231 (294)
T ss_dssp EEEEECC----------CCHHHHH-HHHHTEEEEEEEEEEE--EECSSC---CHHHHHHHHHHHHH-CSEEEEEEEECTT
T ss_pred cEEEECCCCccCcchhccHHHHHH-HHHHhcCCCCEEEEec--CCcccc---hHHHHHHHHHHHHH-CCCeEEEEEEecc
Confidence 99999887542 145665 8999999999999986 221111 12334445556555 6655543 3455
Q ss_pred CC-CceEEEEEEEcC
Q 021911 286 FE-RDHACVVGGYRM 299 (305)
Q Consensus 286 ~~-~~~~~vv~~~~~ 299 (305)
|. ..+.++++.+..
T Consensus 232 ~p~g~~~f~~as~~~ 246 (294)
T 3adn_A 232 YYGGIMTFAWATDND 246 (294)
T ss_dssp SSSSEEEEEEEESCT
T ss_pred cCCCceEEEEEeCCc
Confidence 53 445667777654
No 153
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.40 E-value=5.2e-12 Score=111.42 Aligned_cols=143 Identities=10% Similarity=0.028 Sum_probs=106.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.++++.+|||+|||+|..+..++.. ++..+|+|+|+++.++..+.++++.. .+|.+++.|..+.... ...||+
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~---~~~~D~ 93 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK---KDAIDT 93 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---cccccE
Confidence 4678899999999999999999987 45668999999998777777776655 3599999998765421 135998
Q ss_pred EE-EeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEE
Q 021911 217 IF-SDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVG 295 (305)
Q Consensus 217 V~-~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~ 295 (305)
|+ +.+--..-.+++. .+...|+++++|+++-. ... ....++|.++||.+.+...+..-.+-|-++++
T Consensus 94 IviagmGg~lI~~IL~-~~~~~L~~~~~lIlq~~-------~~~----~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~ 161 (244)
T 3gnl_A 94 IVIAGMGGTLIRTILE-EGAAKLAGVTKLILQPN-------IAA----WQLREWSEQNNWLITSEAILREDNKVYEIMVL 161 (244)
T ss_dssp EEEEEECHHHHHHHHH-HTGGGGTTCCEEEEEES-------SCH----HHHHHHHHHHTEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCchHHHHHHHH-HHHHHhCCCCEEEEEcC-------CCh----HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEE
Confidence 76 4555555677777 89999999999999861 112 22357888899999876655554455666666
Q ss_pred EEc
Q 021911 296 GYR 298 (305)
Q Consensus 296 ~~~ 298 (305)
.+.
T Consensus 162 ~~~ 164 (244)
T 3gnl_A 162 APS 164 (244)
T ss_dssp EEC
T ss_pred EeC
Confidence 654
No 154
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.40 E-value=1.7e-12 Score=117.34 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=88.0
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C-CeEEE
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T-NVIPI 197 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~-nI~~~ 197 (305)
..|....++..++..+. ..++.+|||+|||+|.++..++.. +..+|+++|+|+.++..+.++++.. . ++.++
T Consensus 104 pr~~te~lv~~~l~~~~---~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 104 PRPETEELVELALELIR---KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVR 178 (284)
T ss_dssp CCTTHHHHHHHHHHHHH---HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred cChhHHHHHHHHHHHhc---ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 34445667776664332 236689999999999999999998 6779999999997766666665544 2 49999
Q ss_pred EccCCCCcccccCCCcE---eEEEEeCCChh----------------------HHHHHHHHHh-ccCCCCcEEEEEE
Q 021911 198 IEDARHPAKYRMLVGMV---DVIFSDVAQPD----------------------QARILALNAS-YFLKAGGHFVISI 248 (305)
Q Consensus 198 ~~D~~~~~~~~~~~~~f---D~V~~d~~~~~----------------------~~~~l~~~a~-~~LkpGG~lv~s~ 248 (305)
+.|+.+... .+| |+|++|+|... ...++. ++. +.|+|||+|++.+
T Consensus 179 ~~D~~~~~~-----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~-~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 179 KGEFLEPFK-----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYR-EFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp ESSTTGGGG-----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHH-HHHHHCCCTTCEEEEEC
T ss_pred ECcchhhcc-----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHH-HHHHhcCCCCCEEEEEE
Confidence 999987432 467 99999987321 114565 888 9999999999976
No 155
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.39 E-value=6e-13 Score=117.87 Aligned_cols=107 Identities=14% Similarity=0.111 Sum_probs=85.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCccccc----CCCc
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRM----LVGM 213 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~----~~~~ 213 (305)
..+..+|||+|||+|..+..+|+.+.+.++|+++|+|+.++..+.+..++. ++|++++.|+.+..+... ...+
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 345689999999999999999998755789999999996666655555443 479999999865422100 1468
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
||+||+|....+....+. ++.++|||||.|++..
T Consensus 157 fD~V~~d~~~~~~~~~l~-~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDADKDNYLNYHK-RLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSCSTTHHHHHH-HHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCchHHHHHHHH-HHHHhCCCCeEEEEec
Confidence 999999998888788887 8999999999999864
No 156
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.39 E-value=8.3e-12 Score=119.30 Aligned_cols=153 Identities=18% Similarity=0.105 Sum_probs=105.1
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCC
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHP 204 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~ 204 (305)
.+...++..+ .+.++.+|||+|||+|.++..+|+. ..+|+++|+|+.+++.+.++++.. +|+.+++.|+.+.
T Consensus 273 ~l~~~~~~~l---~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 273 KMVARALEWL---DVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHH---TCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSC
T ss_pred HHHHHHHHhh---cCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 3444444322 4567889999999999999999987 358999999997777777766554 5899999999774
Q ss_pred ccc-ccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeec
Q 021911 205 AKY-RMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTL 283 (305)
Q Consensus 205 ~~~-~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l 283 (305)
... .....+||+|++|+|.....+++. .+. .++|++.++++. ++ ..++.....|.+.||++.+...+
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~g~~~~~~-~l~-~~~p~~ivyvsc---------~p-~tlard~~~l~~~Gy~~~~~~~~ 414 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARAGAAGVMQ-QII-KLEPIRIVYVSC---------NP-ATLARDSEALLKAGYTIARLAML 414 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTTCCHHHHH-HHH-HHCCSEEEEEES---------CH-HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhhhhhhcCCCCEEEECCCCccHHHHHH-HHH-hcCCCeEEEEEC---------Ch-HHHHhhHHHHHHCCcEEEEEEEe
Confidence 321 122458999999999543334443 333 478987777763 22 23456677788889999886666
Q ss_pred CCCCC-ceEEEEEEE
Q 021911 284 EPFER-DHACVVGGY 297 (305)
Q Consensus 284 ~p~~~-~~~~vv~~~ 297 (305)
+.|.. .|.=.|+..
T Consensus 415 d~Fp~t~HvE~v~ll 429 (433)
T 1uwv_A 415 DMFPHTGHLESMVLF 429 (433)
T ss_dssp CCSTTSSCCEEEEEE
T ss_pred ccCCCCCeEEEEEEE
Confidence 55543 344344444
No 157
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.39 E-value=8.1e-13 Score=116.16 Aligned_cols=107 Identities=16% Similarity=0.200 Sum_probs=85.6
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCccccc----CCCc
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRM----LVGM 213 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~----~~~~ 213 (305)
..+..+|||+|||+|..+.++++.+.+.++|+++|+|+.+++.+.+..++. ++|++++.|+.+..+... ...+
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 345689999999999999999998865789999999997766665555443 369999999865422100 1468
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
||+||+|....+....+. ++.++|||||.|++..
T Consensus 148 fD~I~~d~~~~~~~~~l~-~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADKPNYIKYHE-RLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCGGGHHHHHH-HHHHHEEEEEEEEEEC
T ss_pred cCEEEECCchHHHHHHHH-HHHHhcCCCeEEEEec
Confidence 999999998888888887 9999999999999875
No 158
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.39 E-value=1.2e-12 Score=115.46 Aligned_cols=102 Identities=19% Similarity=0.103 Sum_probs=81.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-CCCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-RTNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-~~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+.++.+|||+|||+|.++..+++. ..+|+++|+|+.++..+.+.+.. .+++.+++.|+.+.+ ....+||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP---LPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC---SCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC---CCCCCeeEEE
Confidence 4567899999999999999999987 35899999999555554444411 268999999997654 2356899999
Q ss_pred EeCC---ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 219 SDVA---QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 219 ~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+... .++...++. ++.++|||||+|+++.
T Consensus 110 ~~~~l~~~~~~~~~l~-~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLA-EAIRVLKPGGALLEGW 141 (263)
T ss_dssp EESCGGGCTTHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred ECCchhhcCCHHHHHH-HHHHHCCCCcEEEEEe
Confidence 9766 446777777 9999999999999884
No 159
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.38 E-value=1.2e-12 Score=123.18 Aligned_cols=114 Identities=20% Similarity=0.177 Sum_probs=85.0
Q ss_pred ccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH----------c-CCCeEEEEccCCCC
Q 021911 136 VDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK----------K-RTNVIPIIEDARHP 204 (305)
Q Consensus 136 l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~----------~-~~nI~~~~~D~~~~ 204 (305)
|+.+.+.++.+|||||||+|..+..+|...+ ..+|++||+|+.++.-+.++++ . ..+|.++++|+.+.
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 3444688999999999999999999998753 3469999999855443333221 1 15799999999886
Q ss_pred cccccCCCcEeEEEEeCC--ChhHHHHHHHHHhccCCCCcEEEEEEcccc
Q 021911 205 AKYRMLVGMVDVIFSDVA--QPDQARILALNASYFLKAGGHFVISIKANC 252 (305)
Q Consensus 205 ~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~ 252 (305)
+... ....||+|+++.+ .++....|. ++++.|||||+|+++.+.+.
T Consensus 245 p~~d-~~~~aDVVf~Nn~~F~pdl~~aL~-Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 245 EWRE-RIANTSVIFVNNFAFGPEVDHQLK-ERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHH-HHHTCSEEEECCTTCCHHHHHHHH-HHHTTSCTTCEEEESSCSSC
T ss_pred cccc-ccCCccEEEEcccccCchHHHHHH-HHHHcCCCCcEEEEeecccC
Confidence 5321 1247999999876 567777787 88999999999998764433
No 160
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.38 E-value=1.7e-11 Score=113.46 Aligned_cols=153 Identities=14% Similarity=0.133 Sum_probs=103.5
Q ss_pred ccccCCCC-CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCC
Q 021911 136 VDNIWIKP-GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLV 211 (305)
Q Consensus 136 l~~~~~~~-g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~ 211 (305)
++.+...+ ..+|||+|||+|.++..+++.+ +..+++++|+ +..+..+.+.+... .+|+++..|+.+.+.. .+
T Consensus 171 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~ 246 (352)
T 3mcz_A 171 VSELGVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF--EG 246 (352)
T ss_dssp HHTCGGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG--TT
T ss_pred HHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc--CC
Confidence 34444556 7899999999999999999986 5679999999 65555554444433 4699999999876421 24
Q ss_pred CcEeEEEEeCCC---h--hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh-----------------HHHHHHH
Q 021911 212 GMVDVIFSDVAQ---P--DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV-----------------FQSEVKK 269 (305)
Q Consensus 212 ~~fD~V~~d~~~---~--~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v-----------------~~~~~~~ 269 (305)
..||+|++.... + +...++. ++++.|||||+|++...........+.... ..+..+.
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIG-HAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGV 325 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHH-HHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHH
T ss_pred CCccEEEEecccccCCHHHHHHHHH-HHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHH
Confidence 579999986552 2 3366676 999999999999998632111111111100 1112356
Q ss_pred HHHCCCcEeEEeecCCCCCceEEEEEEEc
Q 021911 270 LQQDQFKPFEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 270 l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~ 298 (305)
|+++||++++.. . ..+.+++++++
T Consensus 326 l~~aGf~~~~~~-~----g~~~l~~a~kp 349 (352)
T 3mcz_A 326 VRDAGLAVGERS-I----GRYTLLIGQRS 349 (352)
T ss_dssp HHHTTCEEEEEE-E----TTEEEEEEECC
T ss_pred HHHCCCceeeec-c----CceEEEEEecC
Confidence 689999998842 2 34778888765
No 161
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.38 E-value=1.6e-11 Score=114.50 Aligned_cols=154 Identities=14% Similarity=0.045 Sum_probs=103.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.+..+|||+|||+|.++..+++.. +..+++++|+ +..+..+.+.+... .+|++++.|+.+.. +..||+
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~D~ 251 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL-----PVTADV 251 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----SCCEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC-----CCCCCE
Confidence 45678999999999999999999986 5679999999 86655555554433 47999999997532 235999
Q ss_pred EEEeCC---Chh--HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh-h----------------hHHHHHHHHHHCC
Q 021911 217 IFSDVA---QPD--QARILALNASYFLKAGGHFVISIKANCIDSTVPAE-A----------------VFQSEVKKLQQDQ 274 (305)
Q Consensus 217 V~~d~~---~~~--~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~-~----------------v~~~~~~~l~~~G 274 (305)
|++... .++ ...++. ++.++|||||+|++.............. . -..+..+.|+++|
T Consensus 252 v~~~~vl~~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 330 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILR-GCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAG 330 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTT
T ss_pred EEEeccccCCCHHHHHHHHH-HHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 998665 222 346676 9999999999999987300111111000 0 0111235568899
Q ss_pred CcEeEEeecCCCC--CceEEEEEEEcCCC
Q 021911 275 FKPFEQVTLEPFE--RDHACVVGGYRMPK 301 (305)
Q Consensus 275 f~~~e~~~l~p~~--~~~~~vv~~~~~~~ 301 (305)
|+++++..+..+. ..+.+++++++.+.
T Consensus 331 f~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 359 (374)
T 1qzz_A 331 LALASERTSGSTTLPFDFSILEFTAVSEE 359 (374)
T ss_dssp EEEEEEEEECCSSCSSCEEEEEEEECC--
T ss_pred CceEEEEECCCCcccCCcEEEEEEECccc
Confidence 9999887765442 34478888876543
No 162
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.38 E-value=4.4e-12 Score=108.94 Aligned_cols=128 Identities=13% Similarity=0.090 Sum_probs=92.9
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
..++.+|||+|||+|.++..++ .+|+++|+|+. ++.+++.|+.+.+ ....+||+|++.
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~-------------~~~~~~~d~~~~~---~~~~~fD~v~~~ 122 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL-------------DPRVTVCDMAQVP---LEDESVDVAVFC 122 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS-------------STTEEESCTTSCS---CCTTCEEEEEEE
T ss_pred cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC-------------CceEEEeccccCC---CCCCCEeEEEEe
Confidence 4577899999999999888773 47999999993 6778899987753 235689999987
Q ss_pred CC--ChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEc
Q 021911 221 VA--QPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 221 ~~--~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~ 298 (305)
.. .++...++. ++.++|||||+|++++...... . .....+.|+++||++++...... .++++++++.
T Consensus 123 ~~l~~~~~~~~l~-~~~~~L~~gG~l~i~~~~~~~~---~----~~~~~~~l~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 123 LSLMGTNIRDFLE-EANRVLKPGGLLKVAEVSSRFE---D----VRTFLRAVTKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp SCCCSSCHHHHHH-HHHHHEEEEEEEEEEECGGGCS---C----HHHHHHHHHHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred hhccccCHHHHHH-HHHHhCCCCeEEEEEEcCCCCC---C----HHHHHHHHHHCCCEEEEEecCCC---eEEEEEEEec
Confidence 65 356677776 9999999999999987321111 1 12234667889999887543322 3677778776
Q ss_pred CCC
Q 021911 299 MPK 301 (305)
Q Consensus 299 ~~~ 301 (305)
..+
T Consensus 192 ~~~ 194 (215)
T 2zfu_A 192 GPP 194 (215)
T ss_dssp SSC
T ss_pred Ccc
Confidence 544
No 163
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.37 E-value=5.9e-12 Score=110.33 Aligned_cols=108 Identities=14% Similarity=0.191 Sum_probs=84.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcc-cc-------
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAK-YR------- 208 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~-~~------- 208 (305)
...++.+|||+|||+|..+..+++.+.+.++|+++|+++..++.+.+.++.. .+|.+++.|+.+..+ ..
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 3457789999999999999999998754679999999996666655555443 349999999865322 10
Q ss_pred ----cC-C-CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 209 ----ML-V-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 209 ----~~-~-~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+. . .+||+|+++...+.....+. ++.++|||||+|++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~-~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKENYPNYYP-LILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGGGHHHHHH-HHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHHHHHHHHH-HHHHHcCCCeEEEEEc
Confidence 01 1 68999999988777777777 9999999999999975
No 164
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=1.2e-12 Score=113.49 Aligned_cols=107 Identities=14% Similarity=0.166 Sum_probs=85.2
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCccccc-C--CCcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRM-L--VGMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~-~--~~~f 214 (305)
..++.+|||+|||+|..+..+++.+.+.++|+++|+|+.++..+.+.++.. .+|.+++.|+.+...... . ..+|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 456789999999999999999998755679999999997766666555443 589999999865422100 0 1689
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|++|.+.......+. ++.++|+|||.|++..
T Consensus 147 D~v~~d~~~~~~~~~l~-~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 147 DVAVVDADKENCSAYYE-RCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEEECSCSTTHHHHHH-HHHHHEEEEEEEEEEC
T ss_pred cEEEECCCHHHHHHHHH-HHHHHcCCCeEEEEEC
Confidence 99999999887788887 9999999999999864
No 165
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.37 E-value=3.8e-12 Score=108.54 Aligned_cols=104 Identities=16% Similarity=0.105 Sum_probs=78.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
...++.+|||+|||+|..+..++.. ...+|+++|+|+.+++.+.+.+... .++.+++.|+.+.+ ....+||+|+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~ 94 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP---FKDESMSFVY 94 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC---SCTTCEEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC---CCCCceeEEE
Confidence 3567899999999999986555544 3459999999996666555554432 67999999998754 2257899999
Q ss_pred EeCC---C--hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 219 SDVA---Q--PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 219 ~d~~---~--~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+..+ . .+...++. ++.++|||||+|++++.
T Consensus 95 ~~~~l~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAID-EIKRVLKPGGLACINFL 129 (209)
T ss_dssp ECSCGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred EcChHHhCCHHHHHHHHH-HHHHHcCCCcEEEEEEe
Confidence 8654 2 45666666 99999999999999874
No 166
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.37 E-value=1.8e-12 Score=109.57 Aligned_cols=99 Identities=28% Similarity=0.371 Sum_probs=75.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCC--------cEEEEEeCChHHHHHHHHHHHcCCCeEEE-EccCCCCccc---
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPN--------GVVYAVEFSHRSGRDLVNMAKKRTNVIPI-IEDARHPAKY--- 207 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~--------~~V~avD~s~~~~~~l~~~a~~~~nI~~~-~~D~~~~~~~--- 207 (305)
.++++.+|||+|||+|.++..+++.++.. .+|+++|+|+. ....++.++ +.|+......
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~---------~~~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI---------FPLEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC---------CCCTTCEEECSCCTTSHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc---------ccCCCCeEEEeccCCCHHHHHHH
Confidence 35788999999999999999999997543 79999999982 112578999 8998765321
Q ss_pred --ccCCCcEeEEEEeCCC-------hhH-------HHHHHHHHhccCCCCcEEEEEE
Q 021911 208 --RMLVGMVDVIFSDVAQ-------PDQ-------ARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 208 --~~~~~~fD~V~~d~~~-------~~~-------~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.....+||+|+++.+. .+. ..++. ++.++|||||+|++.+
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLS-VTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHH-HHHHHhcCCCEEEEEe
Confidence 0113589999997742 122 35565 8999999999999987
No 167
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.37 E-value=2e-12 Score=121.60 Aligned_cols=102 Identities=21% Similarity=0.106 Sum_probs=83.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCccc-ccCCCcEeEEEE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKY-RMLVGMVDVIFS 219 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~-~~~~~~fD~V~~ 219 (305)
++.+|||+|||+|.++.++|.. ..+|++||+|+.+++.+.++++.+ .|+.+++.|+.+.... .....+||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 7789999999999999999987 358999999998877777777655 5699999998765321 011468999999
Q ss_pred eCCC------------hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DVAQ------------PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~~~------------~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|. ..+.+++. ++.++|+|||.|++++
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNL-RAIKLLKEGGILATAS 325 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHH-HHHHTEEEEEEEEEEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHH-HHHHhcCCCCEEEEEE
Confidence 9985 45666776 8999999999999997
No 168
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.36 E-value=1.8e-11 Score=110.43 Aligned_cols=145 Identities=20% Similarity=0.150 Sum_probs=100.9
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHH----H--------cCCCeEEEEccCCCCccccc
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMA----K--------KRTNVIPIIEDARHPAKYRM 209 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a----~--------~~~nI~~~~~D~~~~~~~~~ 209 (305)
....+|||||||+|.++..+++. +..+|++||+|+..++.+.+.. . ..+++++++.|+.+....
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc--
Confidence 34589999999999999999987 5679999999996665555544 1 135799999998654321
Q ss_pred CCCcEeEEEEeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe-
Q 021911 210 LVGMVDVIFSDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV- 281 (305)
Q Consensus 210 ~~~~fD~V~~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~- 281 (305)
..+||+|++|++.+. ..+++. ++.++|||||.|++.+ .+... ....+....+.+++. |...+..
T Consensus 150 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~-~~~~~L~pgG~lv~~~--~~~~~---~~~~~~~~~~~l~~~-f~~v~~~~ 221 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPAKVLFSEEFYR-YVYDALNNPGIYVTQA--GSVYL---FTDELISAYKEMKKV-FDRVYYYS 221 (281)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHH-HHHHHEEEEEEEEEEE--EETTT---SHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred -cCCeeEEEECCCCCCCcchhhhHHHHHH-HHHHhcCCCcEEEEEc--CCccc---CHHHHHHHHHHHHHH-CCceEEEE
Confidence 468999999988531 245566 8999999999999986 22211 122333444555544 6655543
Q ss_pred -ecCCCCCceEEEEEEEc
Q 021911 282 -TLEPFERDHACVVGGYR 298 (305)
Q Consensus 282 -~l~p~~~~~~~vv~~~~ 298 (305)
.+..+...+.++++.+.
T Consensus 222 ~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 222 FPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp ECCTTSSSSEEEEEEEES
T ss_pred EecCCCCceEEEEEeeCC
Confidence 34556567778888875
No 169
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.36 E-value=4.4e-12 Score=120.20 Aligned_cols=164 Identities=15% Similarity=0.137 Sum_probs=104.7
Q ss_pred cCchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEcc
Q 021911 121 WNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200 (305)
Q Consensus 121 ~~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D 200 (305)
|......++..++.. +.+.++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++ ++......
T Consensus 88 ~~~~~~~~~~~l~~~---~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~----~~~~~a~~~-~~~~~~~~ 156 (416)
T 4e2x_A 88 MREHFAMLARDFLAT---ELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSS----GVAAKAREK-GIRVRTDF 156 (416)
T ss_dssp HHHHHHHHHHHHHHT---TTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCH----HHHHHHHTT-TCCEECSC
T ss_pred HHHHHHHHHHHHHHH---hCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCH----HHHHHHHHc-CCCcceee
Confidence 333344455555433 35678899999999999999999986 24899999999 777777765 33333322
Q ss_pred CCCCc--ccccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEEccc-------ccCCCCchh--hhH-HH
Q 021911 201 ARHPA--KYRMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISIKAN-------CIDSTVPAE--AVF-QS 265 (305)
Q Consensus 201 ~~~~~--~~~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~~~~-------~i~~~~~~~--~v~-~~ 265 (305)
+.... ......++||+|++... .++...++. +++++|||||+|+++++.. .......+. ..- ..
T Consensus 157 ~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~-~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 235 (416)
T 4e2x_A 157 FEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLE-GVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATS 235 (416)
T ss_dssp CSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHH-HHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHH
T ss_pred echhhHhhcccCCCCEEEEEECChHHhcCCHHHHHH-HHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHH
Confidence 11111 01112479999999776 567788887 9999999999999987421 001100010 111 22
Q ss_pred HHHHHHHCCCcEeEEeecCCCCCceEEEEEE
Q 021911 266 EVKKLQQDQFKPFEQVTLEPFERDHACVVGG 296 (305)
Q Consensus 266 ~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~ 296 (305)
....++++||++++...+..+.....+++.+
T Consensus 236 l~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 236 VQGMAQRCGFELVDVQRLPVHGGEVRYTLAR 266 (416)
T ss_dssp HHHHHHHTTEEEEEEEEECGGGSEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEEccCCCCEEEEEEEe
Confidence 3456689999999888776554444444443
No 170
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.36 E-value=9e-13 Score=108.62 Aligned_cols=121 Identities=17% Similarity=0.054 Sum_probs=83.1
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCC-CeEEEEccC
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRT-NVIPIIEDA 201 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~-nI~~~~~D~ 201 (305)
|....+...++..+.. .+.++.+|||+|||+|.++..+++.. + .|+++|+|+.+++.+.+.+.... ++++++.|+
T Consensus 22 ~~~~~~~~~~~~~~~~-~~~~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~ 97 (171)
T 1ws6_A 22 PSPVRLRKALFDYLRL-RYPRRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV 97 (171)
T ss_dssp CCCHHHHHHHHHHHHH-HCTTCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH
T ss_pred CCHHHHHHHHHHHHHh-hccCCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccH
Confidence 3344555555443321 13367899999999999999999873 2 49999999966655555544333 799999998
Q ss_pred CCCccc-ccCCCcEeEEEEeCCC-hhHHHHHHHHHh--ccCCCCcEEEEEE
Q 021911 202 RHPAKY-RMLVGMVDVIFSDVAQ-PDQARILALNAS--YFLKAGGHFVISI 248 (305)
Q Consensus 202 ~~~~~~-~~~~~~fD~V~~d~~~-~~~~~~l~~~a~--~~LkpGG~lv~s~ 248 (305)
.+.... .....+||+|+++++. .+..+.+. .+. ++|||+|.+++++
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~-~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYAMDLAALFG-ELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTTSCTTHHHH-HHHHHTCEEEEEEEEEEE
T ss_pred HHHHHhhhccCCceEEEEECCCCchhHHHHHH-HHHhhcccCCCcEEEEEe
Confidence 764221 1112489999999874 33334444 555 9999999999987
No 171
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.36 E-value=6.6e-12 Score=118.55 Aligned_cols=104 Identities=16% Similarity=-0.006 Sum_probs=84.0
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---C-CeEEEEccCCCCcccc-cCCCcEeE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---T-NVIPIIEDARHPAKYR-MLVGMVDV 216 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~-nI~~~~~D~~~~~~~~-~~~~~fD~ 216 (305)
.++.+|||+|||+|.++.++|.. ...+|++||+|+.+++.+.++++.+ + ++++++.|+.+..... ....+||+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 57789999999999999999986 2458999999998877777776654 2 7899999987653210 01358999
Q ss_pred EEEeCCC------------hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVAQ------------PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~~------------~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|++|+|. ..+.+++. ++.++|+|+|.|++++
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINM-LAIQLLNEGGILLTFS 339 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHH-HHHHTEEEEEEEEEEE
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHH-HHHHhcCCCcEEEEEe
Confidence 9999985 56677777 8999999999999987
No 172
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.36 E-value=1.3e-11 Score=113.00 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=101.7
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-------CCCeEEEEccCCCCcccccCCCcE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-------RTNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-------~~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
....+|||||||+|.++..+++.. +..+|++||+|+..++.+.+.... .+++++++.|+...... ..++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER--TEERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH--CCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh--cCCCc
Confidence 345899999999999999999874 456899999999666655554432 36899999998764322 25689
Q ss_pred eEEEEeCCChh----------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--e
Q 021911 215 DVIFSDVAQPD----------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--T 282 (305)
Q Consensus 215 D~V~~d~~~~~----------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~ 282 (305)
|+|++|.+.+. ..+.+. ++.++|||||.|++.+. +... . ....+....+.+++. |...... .
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~-~~~~~LkpgG~lv~~~~--~~~~-~-~~~~~~~~~~~l~~~-F~~v~~~~~~ 226 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYR-LVKAHLNPGGVMGMQTG--MILL-T-HHRVHPVVHRTVREA-FRYVRSYKNH 226 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHH-HHHHTEEEEEEEEEEEE--EECC-----CHHHHHHHHHHTT-CSEEEEEEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHH-HHHHhcCCCcEEEEEcc--Cccc-c-CHHHHHHHHHHHHHH-CCceEEEEEe
Confidence 99999987654 356676 99999999999999752 2110 1 112334445556555 7655433 3
Q ss_pred cCCCCCceEEEEEEEc
Q 021911 283 LEPFERDHACVVGGYR 298 (305)
Q Consensus 283 l~p~~~~~~~vv~~~~ 298 (305)
+..+...+.++++.+.
T Consensus 227 vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 227 IPGFFLNFGFLLASDA 242 (314)
T ss_dssp EGGGTEEEEEEEEESS
T ss_pred cCCCCCeEEEEEEECC
Confidence 4445455667778765
No 173
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.36 E-value=1.8e-12 Score=110.97 Aligned_cols=94 Identities=21% Similarity=0.290 Sum_probs=75.5
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
++.+|||+|||+|.++..+ + ..+|+++|+|+ .+++.++++ +++.+++.|+.+.+ ...++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSE----AMLAVGRRRAPEATWVRAWGEALP---FPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCH----HHHHHHHHHCTTSEEECCCTTSCC---SCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCH----HHHHHHHHhCCCcEEEEcccccCC---CCCCcEEEEEEcC
Confidence 7899999999999988877 1 12899999999 555555544 68999999997754 2356899999976
Q ss_pred C---ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 222 A---QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 222 ~---~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
. .++..+++. ++.++|||||.|++++.
T Consensus 104 ~l~~~~~~~~~l~-~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 104 TLEFVEDVERVLL-EARRVLRPGGALVVGVL 133 (211)
T ss_dssp CTTTCSCHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHH-HHHHHcCCCCEEEEEec
Confidence 6 356777777 99999999999999984
No 174
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=1.4e-12 Score=113.16 Aligned_cols=106 Identities=19% Similarity=0.227 Sum_probs=81.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhC----CCcEEEEEeCChHHHHHHHHHHHc-------CCCeEEEEccCCCCccc-
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVG----PNGVVYAVEFSHRSGRDLVNMAKK-------RTNVIPIIEDARHPAKY- 207 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~----~~~~V~avD~s~~~~~~l~~~a~~-------~~nI~~~~~D~~~~~~~- 207 (305)
.++++.+|||+|||+|.++..+++.++ +.++|+++|+|+..++.+.+.++. ..++.+++.|+......
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 467889999999999999999999875 567999999999766665555443 24799999998764300
Q ss_pred ccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 208 RMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 208 ~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.....+||+|+++.+.+.. +. ++.++|||||+|++++.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~---~~-~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL---PE-ILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC---CH-HHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH---HH-HHHHhcCCCcEEEEEEc
Confidence 0113689999998886542 33 67789999999999873
No 175
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=1.2e-12 Score=114.57 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=83.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcc-cccCC--CcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAK-YRMLV--GMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~-~~~~~--~~f 214 (305)
..+..+|||+|||+|..+..+++.+.+.++|+++|+|+.+++.+.+..+.. .+|.+++.|+.+..+ ..... .+|
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 346689999999999999999998755679999999996665555444332 469999999865321 11112 689
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|+++.+.++....+. ++.++|||||+|++..
T Consensus 150 D~V~~d~~~~~~~~~l~-~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 150 DLIFIDADKRNYPRYYE-IGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEECSCGGGHHHHHH-HHHHTEEEEEEEEEEC
T ss_pred CEEEECCCHHHHHHHHH-HHHHHcCCCeEEEEeC
Confidence 99999998777778887 9999999999999975
No 176
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.35 E-value=3.8e-12 Score=108.93 Aligned_cols=100 Identities=22% Similarity=0.215 Sum_probs=79.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+.+.++.. +++.+++.|+...... ..+||+|
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D~i 147 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA---RAPFDAI 147 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---GCCEEEE
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc---CCCccEE
Confidence 5678999999999999999999998 359999999996666666555543 5899999999775432 4689999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+++.+.+...+ ++.++|||||+|++++.
T Consensus 148 ~~~~~~~~~~~----~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 148 IVTAAPPEIPT----ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp EESSBCSSCCT----HHHHTEEEEEEEEEEEC
T ss_pred EEccchhhhhH----HHHHhcccCcEEEEEEc
Confidence 99876433221 45689999999999983
No 177
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.35 E-value=8.2e-12 Score=116.50 Aligned_cols=101 Identities=10% Similarity=0.052 Sum_probs=77.6
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCc-ccccCCCcEeEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPA-KYRMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~-~~~~~~~~fD~V 217 (305)
....+|||||||+|.++..+++.. +..+|+++|+ +..+..+.+.+.+. ++|+++..|+.+.. +. +..||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF---PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC---CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC---CCCcCEE
Confidence 456899999999999999999986 6679999999 85555544444433 47999999998753 21 3689999
Q ss_pred EEeCCC-----hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQ-----PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~-----~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++.... ++...++. ++++.|||||+|++..
T Consensus 253 ~~~~vlh~~~~~~~~~~l~-~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILT-RVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHHHHHHHH-HHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHHHHHHHH-HHHHhcCCCcEEEEEe
Confidence 985542 23346666 9999999999999976
No 178
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.35 E-value=5.7e-12 Score=127.16 Aligned_cols=122 Identities=18% Similarity=0.117 Sum_probs=91.4
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++.+|||+|||+|.++.+++.. ...+|++||+|+.++..+.++++.+ .++++++.|+.+.... ...+||+|
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~--~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE--ANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH--CCCCEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh--cCCCccEE
Confidence 36889999999999999999975 3457999999997777777766654 3799999999775332 24689999
Q ss_pred EEeCCC--------------hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEe
Q 021911 218 FSDVAQ--------------PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPF 278 (305)
Q Consensus 218 ~~d~~~--------------~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~ 278 (305)
++|+|. .++.+++. .+.++|||||+|++++ |+.....+ .+.+++.+|+..
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~-~a~~~LkpgG~L~~s~--~~~~~~~~--------~~~l~~~g~~~~ 677 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMK-DLKRLLRAGGTIMFSN--NKRGFRMD--------LDGLAKLGLKAQ 677 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHH-HHHHHEEEEEEEEEEE--CCTTCCCC--------HHHHHHTTEEEE
T ss_pred EECCccccCCccchhHHHHHHHHHHHHH-HHHHhcCCCcEEEEEE--CCcccccC--------HHHHHHcCCcee
Confidence 999983 24556666 8999999999999987 22111111 345567787743
No 179
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.35 E-value=2.1e-11 Score=109.62 Aligned_cols=148 Identities=14% Similarity=0.121 Sum_probs=102.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEeE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...+|||||||+|.++..+++.. +..+|++||+++..++.+.+.... .+++++++.|+...... ...+||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK--SENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT--CCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--CCCCeeE
Confidence 45899999999999999999873 356999999999665555544321 26899999998764322 2468999
Q ss_pred EEEeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCCC-
Q 021911 217 IFSDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEPF- 286 (305)
Q Consensus 217 V~~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p~- 286 (305)
|++|++.+. ..+++. ++.++|||+|.|++.+ .+... ....+....+.|++. |...+.. .+..|
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~-~~~~~L~pgG~lv~~~--~~~~~---~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~~ 224 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYA-GIAKALKEDGIFVAQT--DNPWF---TPELITNVQRDVKEI-FPITKLYTANIPTYP 224 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHH-HHHHHEEEEEEEEEEC--CCTTT---CHHHHHHHHHHHHTT-CSEEEEEEECCTTSG
T ss_pred EEECCCCCCCcchhhhHHHHHH-HHHHhcCCCcEEEEEc--CCccc---cHHHHHHHHHHHHHh-CCCeEEEEEecCccc
Confidence 999987542 245666 8999999999999986 22111 123344455666666 7765543 34455
Q ss_pred CCceEEEEEEEcCC
Q 021911 287 ERDHACVVGGYRMP 300 (305)
Q Consensus 287 ~~~~~~vv~~~~~~ 300 (305)
...+.++++.+...
T Consensus 225 ~g~w~~~~ask~~~ 238 (275)
T 1iy9_A 225 SGLWTFTIGSKKYD 238 (275)
T ss_dssp GGCEEEEEEESSCC
T ss_pred CcceEEEEeeCCCC
Confidence 45677778876543
No 180
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=1e-11 Score=108.73 Aligned_cols=100 Identities=23% Similarity=0.255 Sum_probs=80.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.+.+..+.. +++.+++.|+.+... ....||+
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~D~ 161 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV---PEGIFHA 161 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC---CTTCBSE
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc---CCCcccE
Confidence 5678899999999999999999998 359999999997766666555443 579999999877531 1358999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++++.+ ..++. ++.++|||+|+|++.+
T Consensus 162 v~~~~~~~--~~~l~-~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 162 AFVDVREP--WHYLE-KVHKSLMEGAPVGFLL 190 (248)
T ss_dssp EEECSSCG--GGGHH-HHHHHBCTTCEEEEEE
T ss_pred EEECCcCH--HHHHH-HHHHHcCCCCEEEEEe
Confidence 99988755 34455 8889999999999998
No 181
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=2.9e-11 Score=110.27 Aligned_cols=147 Identities=14% Similarity=0.099 Sum_probs=95.9
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
....+|||||||+|.++..+++.. +..+|++||+|+..++.+.+.... .+++++++.|+.+.... ...+||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ--NQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT--CSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh--CCCCce
Confidence 345899999999999999999873 456999999999666655554432 36899999998664221 246899
Q ss_pred EEEEeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCCC
Q 021911 216 VIFSDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEPF 286 (305)
Q Consensus 216 ~V~~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p~ 286 (305)
+|++|++.+. ..+.+. ++.++|||||.|++.. .+.... ........+.+++. |...... .+..|
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~-~~~~~LkpgG~lv~~~--~~~~~~---~~~~~~~~~~l~~~-f~~v~~~~~~vP~~ 243 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQ-LMKTALKEDGVLCCQG--ECQWLH---LDLIKEMRQFCQSL-FPVVAYAYCTIPTY 243 (304)
T ss_dssp EEEEECC-----------CHHHH-HHHHHEEEEEEEEEEE--ECTTTC---HHHHHHHHHHHHHH-CSEEEEEEEECTTS
T ss_pred EEEECCCCCCCcchhhhHHHHHH-HHHhccCCCeEEEEec--CCcccc---hHHHHHHHHHHHHh-CCCceeEEEEeccc
Confidence 9999988542 234565 8999999999999976 221111 12222223334333 5544433 35555
Q ss_pred C-CceEEEEEEEc
Q 021911 287 E-RDHACVVGGYR 298 (305)
Q Consensus 287 ~-~~~~~vv~~~~ 298 (305)
. .+..++++.+.
T Consensus 244 ~~g~~g~~~as~~ 256 (304)
T 2o07_A 244 PSGQIGFMLCSKN 256 (304)
T ss_dssp GGGEEEEEEEESS
T ss_pred cCcceEEEEEeCC
Confidence 3 33456667654
No 182
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.34 E-value=5.5e-11 Score=111.09 Aligned_cols=146 Identities=14% Similarity=0.066 Sum_probs=99.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...+..+|||+|||+|.++..+++.+ +..+++++|+ +..+..+.+.+.+. ++|+++..|+..+. +..||+
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-----p~~~D~ 271 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI-----PDGADV 271 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC-----CSSCSE
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC-----CCCceE
Confidence 45677999999999999999999985 6779999999 85555555444432 57999999998432 238999
Q ss_pred EEEeCC---Chh--HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhh-h---------------HHHHHHHHHHCCC
Q 021911 217 IFSDVA---QPD--QARILALNASYFLKAGGHFVISIKANCIDSTVPAEA-V---------------FQSEVKKLQQDQF 275 (305)
Q Consensus 217 V~~d~~---~~~--~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~-v---------------~~~~~~~l~~~Gf 275 (305)
|++... .++ ..+++. ++++.|||||+|++.... .+....+.. . ..+..+.|+++||
T Consensus 272 v~~~~vlh~~~d~~~~~~L~-~~~~~L~pgG~l~i~e~~--~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 348 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILR-RIATAMKPDSRLLVIDNL--IDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGL 348 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHH-HHHTTCCTTCEEEEEEEB--CCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTE
T ss_pred EEhhhhhccCCHHHHHHHHH-HHHHHcCCCCEEEEEEec--cCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCC
Confidence 998555 222 336776 999999999999998632 111111110 0 1122355688999
Q ss_pred cEeEEeecCCCCCceEEEEEEE
Q 021911 276 KPFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 276 ~~~e~~~l~p~~~~~~~vv~~~ 297 (305)
+++++..+. ...+.++.+++
T Consensus 349 ~~~~~~~~~--~~~~svie~~~ 368 (369)
T 3gwz_A 349 RVERSLPCG--AGPVRIVEIRR 368 (369)
T ss_dssp EEEEEEECS--SSSEEEEEEEE
T ss_pred eEEEEEECC--CCCcEEEEEEe
Confidence 999887532 22355565553
No 183
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.34 E-value=2.4e-11 Score=111.69 Aligned_cols=149 Identities=8% Similarity=-0.049 Sum_probs=100.8
Q ss_pred cccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCc
Q 021911 137 DNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
+.+...+..+|||+|||+|.++..+++.+ +..+++++|+ +..+....+.+.+. ++|+++..|+.++. +..
T Consensus 163 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----p~~ 235 (332)
T 3i53_A 163 AKYDWAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL-----PAG 235 (332)
T ss_dssp GSSCCGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----CCS
T ss_pred HhCCCCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC-----CCC
Confidence 33344567899999999999999999986 5679999999 85555555444432 67999999997432 238
Q ss_pred EeEEEEeCC---Ch--hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh------------HHHHHHHHHHCCCc
Q 021911 214 VDVIFSDVA---QP--DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV------------FQSEVKKLQQDQFK 276 (305)
Q Consensus 214 fD~V~~d~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v------------~~~~~~~l~~~Gf~ 276 (305)
||+|++... .+ +..+++. ++++.|||||+|++................ ..+..+.|+++||+
T Consensus 236 ~D~v~~~~vlh~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 314 (332)
T 3i53_A 236 AGGYVLSAVLHDWDDLSAVAILR-RCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLA 314 (332)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHH-HHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEE
T ss_pred CcEEEEehhhccCCHHHHHHHHH-HHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCE
Confidence 999998554 22 3467776 999999999999998732111100000000 11223566899999
Q ss_pred EeEEeecCCCCCceEEEEEEE
Q 021911 277 PFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 277 ~~e~~~l~p~~~~~~~vv~~~ 297 (305)
.+++..+.+ +.++.+++
T Consensus 315 ~~~~~~~~~----~~vie~r~ 331 (332)
T 3i53_A 315 VRAAHPISY----VSIVEMTA 331 (332)
T ss_dssp EEEEEECSS----SEEEEEEE
T ss_pred EEEEEECCC----cEEEEEee
Confidence 998876644 56666553
No 184
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.34 E-value=4.9e-12 Score=115.34 Aligned_cols=105 Identities=16% Similarity=0.092 Sum_probs=74.4
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCC--------CeEEEEccCCCCcc-----cc
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRT--------NVIPIIEDARHPAK-----YR 208 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~--------nI~~~~~D~~~~~~-----~~ 208 (305)
.++.+|||||||+|..+..++.. ...+|+++|+|+.+++.+.+.+.... ++.+++.|+..... ..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 35789999999999877766654 33589999999966555554443221 26788888843220 01
Q ss_pred cCCCcEeEEEEeCCC------hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 209 MLVGMVDVIFSDVAQ------PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 209 ~~~~~fD~V~~d~~~------~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
...++||+|+|.... .++..++. +++++|||||+|++++.
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~~~~l~-~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHYATVMN-NLSELTASGGKVLITTM 170 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHHHHHHHHH-HHHHHcCCCCEEEEEeC
Confidence 234699999986541 35566776 99999999999999885
No 185
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.34 E-value=6e-11 Score=107.08 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=100.0
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.+..+|||||||+|.++..+++.. +..+|++||+++..++.+.+.... .+++++++.|+...... ..++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--VTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH--CCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh--CCCCce
Confidence 345899999999999999999763 456999999999655555444332 26899999998764322 246899
Q ss_pred EEEEeCCChh----H---HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE--eecCCC
Q 021911 216 VIFSDVAQPD----Q---ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ--VTLEPF 286 (305)
Q Consensus 216 ~V~~d~~~~~----~---~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~--~~l~p~ 286 (305)
+|++|.+.+. . .+.+. ++.++|||||.|++.+ .+... ....+....+.+++. |...+. ..+..|
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~-~~~~~L~pgG~lv~~~--~~~~~---~~~~~~~~~~~l~~~-F~~v~~~~~~vP~y 226 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYE-KIYNALKPNGYCVAQC--ESLWI---HVGTIKNMIGYAKKL-FKKVEYANISIPTY 226 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHH-HHHHHEEEEEEEEEEC--CCTTT---CHHHHHHHHHHHHTT-CSEEEEEEEECTTS
T ss_pred EEEEcCCCCCCcchhhhHHHHHH-HHHHhcCCCcEEEEEC--CCccc---CHHHHHHHHHHHHHH-CCceEEEEEEcCCc
Confidence 9999886431 1 46666 9999999999999986 22111 112234445566555 776553 345556
Q ss_pred CCce-EEEEEEEc
Q 021911 287 ERDH-ACVVGGYR 298 (305)
Q Consensus 287 ~~~~-~~vv~~~~ 298 (305)
...+ .++++.+.
T Consensus 227 ~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 227 PCGCIGILCCSKT 239 (283)
T ss_dssp GGGEEEEEEEESS
T ss_pred CCCcEEEEEEeCC
Confidence 5444 56666654
No 186
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=3.5e-12 Score=116.68 Aligned_cols=143 Identities=19% Similarity=0.192 Sum_probs=98.9
Q ss_pred CEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC------CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR------TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~------~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+|||||||+|.++..+++.+ +..+|++||+++ .+++.++++ +++++++.|+...... ....+||+||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp----~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~-~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDA----ELARLSREWFDIPRAPRVKIRVDDARMVAES-FTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCH----HHHHHHHHHSCCCCTTTEEEEESCHHHHHHT-CCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCH----HHHHHHHHhccccCCCceEEEECcHHHHHhh-ccCCCCCEEE
Confidence 499999999999999999965 566999999999 555555432 5799999998765321 1246899999
Q ss_pred EeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecC----CCC
Q 021911 219 SDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLE----PFE 287 (305)
Q Consensus 219 ~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~----p~~ 287 (305)
+|...+. ..+.+. +++++|||+|.|++.+. + . . ....+...+..|++. |.....+... ..+
T Consensus 165 ~D~~~~~~~~~~L~t~efl~-~~~r~LkpgGvlv~~~~--~--~-~-~~~~~~~~~~tL~~v-F~~v~~~~~~~~~~g~~ 236 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFE-HCHRGLAPGGLYVANCG--D--H-S-DLRGAKSELAGMMEV-FEHVAVIADPPMLKGRR 236 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHH-HHHHHEEEEEEEEEEEE--E--C-T-TCHHHHHHHHHHHHH-CSEEEEEECHHHHTTSS
T ss_pred ECCCCccccchhhhHHHHHH-HHHHhcCCCcEEEEEec--C--C-c-chHHHHHHHHHHHHH-CCceEEEEecCCCCCCc
Confidence 9876321 246666 89999999999998872 1 1 1 122344556666655 7666555421 123
Q ss_pred CceEEEEEEEcCCC
Q 021911 288 RDHACVVGGYRMPK 301 (305)
Q Consensus 288 ~~~~~vv~~~~~~~ 301 (305)
..+.++++.+...+
T Consensus 237 ~gN~Vl~As~~plp 250 (317)
T 3gjy_A 237 YGNIILMGSDTEFF 250 (317)
T ss_dssp CEEEEEEEESSCCC
T ss_pred CceEEEEEECCCCC
Confidence 45777888766544
No 187
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.33 E-value=5.2e-12 Score=115.10 Aligned_cols=121 Identities=18% Similarity=0.125 Sum_probs=84.8
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc---------CCCeE
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK---------RTNVI 195 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~---------~~nI~ 195 (305)
.+.+...++..+.. ...+..+|||+|||+|.++..+++. +..+|+++|+|+.++..+.+.... ..++.
T Consensus 17 k~~l~~~~~~~l~~-~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~ 93 (313)
T 3bgv_A 17 KSVLIGEFLEKVRQ-KKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAE 93 (313)
T ss_dssp HHHHHHHHHHHHHH-TC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEE
T ss_pred HHHHHHHHHHHhhh-ccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEE
Confidence 34444444443321 2346789999999999999999985 456999999999665555444432 13799
Q ss_pred EEEccCCCCcc---cccCCCcEeEEEEeCCC-------hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 196 PIIEDARHPAK---YRMLVGMVDVIFSDVAQ-------PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 196 ~~~~D~~~~~~---~~~~~~~fD~V~~d~~~-------~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+++.|+...+. ......+||+|++.... ++...++. ++.++|||||.|+++++
T Consensus 94 ~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~-~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 94 FITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLR-NACERLSPGGYFIGTTP 156 (313)
T ss_dssp EEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHH-HHHTTEEEEEEEEEEEE
T ss_pred EEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHH-HHHHHhCCCcEEEEecC
Confidence 99999987641 11123489999997763 23456666 99999999999999984
No 188
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=9.6e-12 Score=106.78 Aligned_cols=102 Identities=26% Similarity=0.402 Sum_probs=79.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++..++..+|+++|+|+..+..+.+..... +++.+++.|+..... ...+||+|
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~v 150 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE---PLAPYDRI 150 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG---GGCCEEEE
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC---CCCCeeEE
Confidence 5678899999999999999999999866679999999996655555444332 579999999854332 14689999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+++.+..... . ++.++|||||+|++++
T Consensus 151 ~~~~~~~~~~---~-~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 151 YTTAAGPKIP---E-PLIRQLKDGGKLLMPV 177 (215)
T ss_dssp EESSBBSSCC---H-HHHHTEEEEEEEEEEE
T ss_pred EECCchHHHH---H-HHHHHcCCCcEEEEEE
Confidence 9987744322 2 6678999999999997
No 189
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.33 E-value=3e-11 Score=112.25 Aligned_cols=146 Identities=12% Similarity=0.024 Sum_probs=101.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...+..+|||+|||+|.++..+++.. +..+|+++|+ +..++.+.+.+++. .+|+++..|+.+.+. ..+|+
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~D~ 259 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-----PEADA 259 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-----CCCSE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-----CCCCE
Confidence 46678999999999999999999986 5679999999 86666655555443 359999999987631 23499
Q ss_pred EEEeCC---Chh--HHHHHHHHHhccCCCCcEEEEEEcccccCCCCc-------------h-h----hhHHHHHHHHHHC
Q 021911 217 IFSDVA---QPD--QARILALNASYFLKAGGHFVISIKANCIDSTVP-------------A-E----AVFQSEVKKLQQD 273 (305)
Q Consensus 217 V~~d~~---~~~--~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~-------------~-~----~v~~~~~~~l~~~ 273 (305)
|++... .++ ..+++. ++.+.|||||+|++............ . . .-..+..+.|+++
T Consensus 260 v~~~~vlh~~~d~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~a 338 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCK-KAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESL 338 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHH-HHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHH
T ss_pred EEEechhccCCHHHHHHHHH-HHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHC
Confidence 998665 223 566676 99999999999988763211100000 0 0 0111224566889
Q ss_pred CCcEeEEeecCCCCCceEEEEEEE
Q 021911 274 QFKPFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 274 Gf~~~e~~~l~p~~~~~~~vv~~~ 297 (305)
||+.++...+. .+.++++++
T Consensus 339 Gf~~v~~~~~~----~~~vi~a~k 358 (359)
T 1x19_A 339 GYKDVTMVRKY----DHLLVQAVK 358 (359)
T ss_dssp TCEEEEEEEET----TEEEEEEEC
T ss_pred CCceEEEEecC----CceEEEEeC
Confidence 99999887765 466777765
No 190
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.33 E-value=5.6e-12 Score=116.58 Aligned_cols=96 Identities=16% Similarity=0.185 Sum_probs=79.3
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
+.++.+|||+|||+|.++.+ |.. ..+|+++|+|+.+++.+.++++.+ .++.+++.|+.+.. .+||+|
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------~~fD~V 262 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------VKGNRV 262 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------CCEEEE
T ss_pred cCCCCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------CCCcEE
Confidence 45789999999999999999 762 569999999998887777777655 47999999997653 689999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++|+|... .+++. .+.++|+|+|.|++++
T Consensus 263 i~dpP~~~-~~~l~-~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 263 IMNLPKFA-HKFID-KALDIVEEGGVIHYYT 291 (336)
T ss_dssp EECCTTTG-GGGHH-HHHHHEEEEEEEEEEE
T ss_pred EECCcHhH-HHHHH-HHHHHcCCCCEEEEEE
Confidence 99987433 25555 8889999999999986
No 191
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=2.9e-12 Score=112.24 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=78.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC--CCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML--VGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~--~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++... +|++||+|+.++..+.+.+ ...++.+++.|+.++...... ...||+|
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN-TAANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS-CCTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC-cccCceEEECcccccccccccccccCccEE
Confidence 357789999999999999999999842 8999999995444443333 125899999999886432111 1248999
Q ss_pred EEeCC---Ch--hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVA---QP--DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+++.. .+ +...++. ++.++|||||+|+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQ-SLRILLGKQGAMYLIE 163 (245)
T ss_dssp EEESSSTTSCGGGHHHHHH-HHHHHHTTTCEEEEEE
T ss_pred EEcchhhcCCHHHHHHHHH-HHHHHcCCCCEEEEEe
Confidence 99765 22 5667776 9999999999988876
No 192
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.32 E-value=4.2e-11 Score=111.09 Aligned_cols=150 Identities=17% Similarity=0.092 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.+..+|||+|||+|.++..+++.. +..+++++|+ +..++.+.+.+... .+|++++.|+.+.. +..||+
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~D~ 252 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL-----PRKADA 252 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----SSCEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC-----CCCccE
Confidence 45678999999999999999999985 5679999999 86665555554443 48999999997532 235999
Q ss_pred EEEeCCC---hh--HHHHHHHHHhccCCCCcEEEEEEcc-cccCCCCchhh-h---------------HHHHHHHHHHCC
Q 021911 217 IFSDVAQ---PD--QARILALNASYFLKAGGHFVISIKA-NCIDSTVPAEA-V---------------FQSEVKKLQQDQ 274 (305)
Q Consensus 217 V~~d~~~---~~--~~~~l~~~a~~~LkpGG~lv~s~~~-~~i~~~~~~~~-v---------------~~~~~~~l~~~G 274 (305)
|++.... ++ ..+++. ++.++|||||+|++.... .... ...... . ..+..+.|+++|
T Consensus 253 v~~~~vl~~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 330 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILT-RCAEALEPGGRILIHERDDLHEN-SFNEQFTELDLRMLVFLGGALRTREKWDGLAASAG 330 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHH-HHHHTEEEEEEEEEEECCBCGGG-CCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTT
T ss_pred EEEcccccCCCHHHHHHHHH-HHHHhcCCCcEEEEEEEeccCCC-CCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCC
Confidence 9986552 22 346676 999999999999998732 1111 111100 0 111235568899
Q ss_pred CcEeEEeecCCC--CCceEEEEEEEc
Q 021911 275 FKPFEQVTLEPF--ERDHACVVGGYR 298 (305)
Q Consensus 275 f~~~e~~~l~p~--~~~~~~vv~~~~ 298 (305)
|++++...+.+. ...+.+++++++
T Consensus 331 f~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 331 LVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred CeEEEEEeCCCCcccCccEEEEEEeC
Confidence 999988776542 122566777664
No 193
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.32 E-value=5.3e-11 Score=109.39 Aligned_cols=147 Identities=16% Similarity=0.132 Sum_probs=100.1
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.+..+|||+|||+|..+..+++.. +..+|++||+|+..++.+.+.+.. .+++++++.|+.+.... ..++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~--~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--VTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH--CCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh--cCCCce
Confidence 345899999999999999999864 456999999999666555555443 25799999998764322 246899
Q ss_pred EEEEeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCCC
Q 021911 216 VIFSDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEPF 286 (305)
Q Consensus 216 ~V~~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p~ 286 (305)
+|++|++.+. ..+++. ++.++|||||.|++.+ .+... ....+....+.+++. |...+.. .+..|
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~-~~~~~LkpgG~lv~~~--~~~~~---~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~ 264 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYE-KIYNALKPNGYCVAQC--ESLWI---HVGTIKNMIGYAKKL-FKKVEYANISIPTY 264 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHH-HHHHHEEEEEEEEEEE--CCTTT---CHHHHHHHHHHHHTT-CSEEEEEEEECTTS
T ss_pred EEEECCcCCCCcchhhhHHHHHH-HHHHhcCCCcEEEEEc--CCccc---CHHHHHHHHHHHHHH-CCCeEEEEEEeccc
Confidence 9999986321 156666 9999999999999986 22111 122334445666655 6655543 34445
Q ss_pred CC-ceEEEEEEEc
Q 021911 287 ER-DHACVVGGYR 298 (305)
Q Consensus 287 ~~-~~~~vv~~~~ 298 (305)
.. ...++++.+.
T Consensus 265 ~~g~w~f~~as~~ 277 (321)
T 2pt6_A 265 PCGCIGILCCSKT 277 (321)
T ss_dssp GGGEEEEEEEESS
T ss_pred cCceEEEEEeeCC
Confidence 43 4456677765
No 194
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.32 E-value=3e-12 Score=115.20 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=78.9
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC------CCeEEEEccCCCCcccccCCCcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR------TNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~------~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
..++.+|||||||+|.++..+++. + .+|+++|+|+.++..+.+.+... .++.++..|+...+.......+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~f 131 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEE-G--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGF 131 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHC-C--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCe
Confidence 457789999999999999999987 2 39999999996655554443221 47889999987654211235799
Q ss_pred eEEEEe-CC---Chh-------HHHHHHHHHhccCCCCcEEEEEEc
Q 021911 215 DVIFSD-VA---QPD-------QARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 215 D~V~~d-~~---~~~-------~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
|+|++. .. .++ ...++. +++++|||||+|+++++
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALK-NIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHH-HHHHTEEEEEEEEEEEE
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHH-HHHHHcCCCeEEEEEeC
Confidence 999996 33 233 666776 99999999999999873
No 195
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.32 E-value=3.1e-12 Score=120.78 Aligned_cols=104 Identities=19% Similarity=0.146 Sum_probs=84.3
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C-CeEEEEccCCCCccc-ccCCCcEeEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T-NVIPIIEDARHPAKY-RMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~-nI~~~~~D~~~~~~~-~~~~~~fD~V 217 (305)
+++.+|||+|||+|.++.++|.. ...+|++||+|+.+++.+.++++.+ . ++.+++.|+.+.... .....+||+|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 47899999999999999999987 3458999999998877777777655 2 899999998765321 1114689999
Q ss_pred EEeCCC------------hhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQ------------PDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~------------~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++|+|. .++.+++. ++.++|||||.|++++
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNF-AGLNLVKDGGILVTCS 335 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHH-HHHTTEEEEEEEEEEE
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHH-HHHHhcCCCcEEEEEE
Confidence 999985 45666776 8999999999999997
No 196
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.32 E-value=6e-11 Score=110.89 Aligned_cols=141 Identities=12% Similarity=0.056 Sum_probs=98.7
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
..+..+|||||||+|.++..+++.+ |..+++++|+ + .+++.+++.++|+++..|+.++. +.. |+|++.
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~-----p~~-D~v~~~ 268 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-P----HVIQDAPAFSGVEHLGGDMFDGV-----PKG-DAIFIK 268 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTCC-----CCC-SEEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-H----HHHHhhhhcCCCEEEecCCCCCC-----CCC-CEEEEe
Confidence 5667899999999999999999986 6779999999 7 66777776789999999998632 123 999986
Q ss_pred CCC---h--hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh---------hhH----------HHH-HHHHHHCCC
Q 021911 221 VAQ---P--DQARILALNASYFLKAGGHFVISIKANCIDSTVPAE---------AVF----------QSE-VKKLQQDQF 275 (305)
Q Consensus 221 ~~~---~--~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~---------~v~----------~~~-~~~l~~~Gf 275 (305)
... + +..++|. ++++.|||||+|++.............. ..+ .++ .+.|+++||
T Consensus 269 ~vlh~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 269 WICHDWSDEHCLKLLK-NCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp SCGGGBCHHHHHHHHH-HHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred chhhcCCHHHHHHHHH-HHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence 552 2 2346666 9999999999999987321111111100 000 122 355689999
Q ss_pred cEeEEeecCCCCCceEEEEEEE
Q 021911 276 KPFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 276 ~~~e~~~l~p~~~~~~~vv~~~ 297 (305)
+.+++..+... +.++.+.+
T Consensus 348 ~~v~~~~~~~~---~~vie~~k 366 (368)
T 3reo_A 348 RGFKVASCAFN---TYVMEFLK 366 (368)
T ss_dssp CEEEEEEEETT---EEEEEEEC
T ss_pred eeeEEEEeCCC---cEEEEEEe
Confidence 99998876554 55555443
No 197
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.32 E-value=5.2e-12 Score=114.38 Aligned_cols=131 Identities=16% Similarity=0.179 Sum_probs=89.7
Q ss_pred cCCCCCCEEEEEecCC------CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEE-EEccCCCCcccccCC
Q 021911 139 IWIKPGARVLYLGAAS------GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIP-IIEDARHPAKYRMLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~------G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~-~~~D~~~~~~~~~~~ 211 (305)
+.++++.+|||||||+ |. ..+++.+++.++|++||+|+. -+++++ ++.|+++.+. .
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-----------v~~v~~~i~gD~~~~~~----~ 121 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-----------VSDADSTLIGDCATVHT----A 121 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-----------BCSSSEEEESCGGGCCC----S
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-----------CCCCEEEEECccccCCc----c
Confidence 3678899999999944 66 666777765689999999994 147889 9999987542 3
Q ss_pred CcEeEEEEeCCCh--------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcE
Q 021911 212 GMVDVIFSDVAQP--------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKP 277 (305)
Q Consensus 212 ~~fD~V~~d~~~~--------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~ 277 (305)
.+||+|++|++.+ ...+++. .+.++|||||+|++.+.. .. .. .+..+.+++.||..
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~-~a~r~LkpGG~~v~~~~~----~~-~~----~~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCG-FIKQKLALGGSIAVKITE----HS-WN----ADLYKLMGHFSWWT 191 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHH-HHHHHEEEEEEEEEEECS----SS-CC----HHHHHHHTTEEEEE
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHH-HHHHhcCCCcEEEEEEec----cC-CH----HHHHHHHHHcCCcE
Confidence 6899999987532 1335666 899999999999997621 11 11 12245566778887
Q ss_pred eEEeecCCCCCceEEEEEEE
Q 021911 278 FEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 278 ~e~~~l~p~~~~~~~vv~~~ 297 (305)
++.....+-. .+.++++..
T Consensus 192 v~~~asr~~s-~e~~lv~~~ 210 (290)
T 2xyq_A 192 AFVTNVNASS-SEAFLIGAN 210 (290)
T ss_dssp EEEEGGGTTS-SCEEEEEEE
T ss_pred EEEEEcCCCc-hheEEecCC
Confidence 7666333333 344454443
No 198
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.31 E-value=2.9e-12 Score=113.19 Aligned_cols=79 Identities=6% Similarity=-0.034 Sum_probs=59.9
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCC-c-ccccC-CCcEeE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHP-A-KYRML-VGMVDV 216 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~-~-~~~~~-~~~fD~ 216 (305)
++.+|||+|||+|.++..++... +..+|+++|+|+.+++.+.+.++.. .+|++++.|+.+. . ..... ..+||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 57899999999999999999875 3569999999997766666655543 3499999998652 2 11100 258999
Q ss_pred EEEeCC
Q 021911 217 IFSDVA 222 (305)
Q Consensus 217 V~~d~~ 222 (305)
|++|+|
T Consensus 144 i~~npp 149 (254)
T 2h00_A 144 CMCNPP 149 (254)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999987
No 199
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.31 E-value=4.4e-11 Score=110.50 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=98.2
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
....+|||||||+|..+..+++.. +..+|++||+|+.+++.+.+.+.. .++|++++.|+...... ....+||
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~-~~~~~fD 196 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-AAEGSYD 196 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-SCTTCEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh-ccCCCcc
Confidence 456899999999999999999873 456999999999666555554432 36899999998654221 1236899
Q ss_pred EEEEeCCChh-------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCc-EeE--EeecCC
Q 021911 216 VIFSDVAQPD-------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFK-PFE--QVTLEP 285 (305)
Q Consensus 216 ~V~~d~~~~~-------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~-~~e--~~~l~p 285 (305)
+|++|++.+. ..+++. ++.++|||||.|++.+ .+.... ...+...++.+++. |. ... ...+..
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~-~~~~~LkpgG~lv~~~--~~~~~~---~~~~~~~~~~l~~~-F~~~~~~~~~~vP~ 269 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQ-SVARALRPGGVVCTQA--ESLWLH---MDIIEDIVSNCREI-FKGSVNYAWTSVPT 269 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHH-HHHHHEEEEEEEEEEC--CCTTTC---HHHHHHHHHHHHHH-CSSCEEEEEEECTT
T ss_pred EEEECCCCccCcchhhhHHHHHH-HHHHhcCCCcEEEEec--CCcccc---HHHHHHHHHHHHHh-CccccceEEEeCCc
Confidence 9999887332 356666 9999999999999975 222111 12233334455433 54 232 234555
Q ss_pred CC-CceEEEEEEEc
Q 021911 286 FE-RDHACVVGGYR 298 (305)
Q Consensus 286 ~~-~~~~~vv~~~~ 298 (305)
|. ....++++.++
T Consensus 270 y~~g~~gf~~as~~ 283 (334)
T 1xj5_A 270 YPSGVIGFMLCSTE 283 (334)
T ss_dssp SGGGEEEEEEEECS
T ss_pred ccCCceEEEEcccC
Confidence 64 34556677764
No 200
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.31 E-value=8.2e-12 Score=116.89 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=91.5
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccC-----------
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRML----------- 210 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~----------- 210 (305)
+.+|||+|||+|++++.+|... .+|++||+|+.+++.+.++++.+ +|+++++.|+.+.......
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 5789999999999999999863 48999999998888877777665 5899999998664321000
Q ss_pred --CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCC
Q 021911 211 --VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFER 288 (305)
Q Consensus 211 --~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~ 288 (305)
...||+|++|+|..... . .+.+.|+++|.++|++ | ++. .++..+..|.+ +|++.+...++.|..
T Consensus 291 ~~~~~fD~Vv~dPPr~g~~---~-~~~~~l~~~g~ivyvs---c-----~p~-t~ard~~~l~~-~y~~~~~~~~D~FP~ 356 (369)
T 3bt7_A 291 LKSYQCETIFVDPPRSGLD---S-ETEKMVQAYPRILYIS---C-----NPE-TLCKNLETLSQ-THKVERLALFDQFPY 356 (369)
T ss_dssp GGGCCEEEEEECCCTTCCC---H-HHHHHHTTSSEEEEEE---S-----CHH-HHHHHHHHHHH-HEEEEEEEEECCSTT
T ss_pred cccCCCCEEEECcCccccH---H-HHHHHHhCCCEEEEEE---C-----CHH-HHHHHHHHHhh-CcEEEEEEeeccCCC
Confidence 03799999999965322 1 3445677899999987 4 122 24555566654 588877766665554
No 201
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.30 E-value=5.2e-12 Score=109.75 Aligned_cols=102 Identities=20% Similarity=0.295 Sum_probs=79.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCC-----CcEEEEEeCChHHHHHHHHHHHc-------CCCeEEEEccCCCCccc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGP-----NGVVYAVEFSHRSGRDLVNMAKK-------RTNVIPIIEDARHPAKY 207 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~-----~~~V~avD~s~~~~~~l~~~a~~-------~~nI~~~~~D~~~~~~~ 207 (305)
.++++.+|||+|||+|.++..+++.++. .++|+++|+++..++.+.+.+.. ..++.+++.|+....+.
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc
Confidence 3678899999999999999999997642 35899999999666655554433 35899999998763221
Q ss_pred ccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 208 RMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 208 ~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
..+||+|+++.+.+... . ++.++|||||+|++++
T Consensus 161 ---~~~fD~I~~~~~~~~~~---~-~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 ---NAPYNAIHVGAAAPDTP---T-ELINQLASGGRLIVPV 194 (227)
T ss_dssp ---GCSEEEEEECSCBSSCC---H-HHHHTEEEEEEEEEEE
T ss_pred ---CCCccEEEECCchHHHH---H-HHHHHhcCCCEEEEEE
Confidence 36899999988755422 3 6778999999999997
No 202
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.30 E-value=4.5e-11 Score=101.93 Aligned_cols=121 Identities=16% Similarity=0.020 Sum_probs=82.2
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCC-CeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRT-NVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~-nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
...++.+|||+|||+|.++..++.. ...+|+++|+|+.+++.+.+.++... ++.+++.|+.+.+ .+||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN------SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC------CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC------CCCCEEE
Confidence 4567899999999999999999987 33489999999966665555554433 7999999987652 4899999
Q ss_pred EeCCC-----hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 219 SDVAQ-----PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 219 ~d~~~-----~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
+|+|. ......+. .+.++| ++ ++++. +. ++ .......+.+++.||++..+
T Consensus 118 ~~~p~~~~~~~~~~~~l~-~~~~~l--~~-~~~~~----~~---~~-~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLL-KAFEIS--DV-VYSIH----LA---KP-EVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp ECCCCSSSSTTTTHHHHH-HHHHHC--SE-EEEEE----EC---CH-HHHHHHHHHHHHTTEEEEEE
T ss_pred EcCCCccccCCchHHHHH-HHHHhc--Cc-EEEEE----eC---Cc-CCHHHHHHHHHHCCCeEEEE
Confidence 99982 23345555 777777 43 43332 11 11 11222245567788876543
No 203
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.30 E-value=5.7e-11 Score=111.32 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=98.3
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEE
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPII 198 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~ 198 (305)
.|....+++.++..+ +.++.+|||+|||+|+++..+|... ..++|+++|+|+.+++.+.++++.. ++|++++
T Consensus 200 a~l~~~la~~l~~~~----~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~ 274 (373)
T 3tm4_A 200 AHLKASIANAMIELA----ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQ 274 (373)
T ss_dssp TCCCHHHHHHHHHHH----TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEE
T ss_pred CCccHHHHHHHHHhh----cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 355666777765422 5678999999999999999999874 4458999999997766666665544 4799999
Q ss_pred ccCCCCcccccCCCcEeEEEEeCCCh----------h-HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHH
Q 021911 199 EDARHPAKYRMLVGMVDVIFSDVAQP----------D-QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEV 267 (305)
Q Consensus 199 ~D~~~~~~~~~~~~~fD~V~~d~~~~----------~-~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~ 267 (305)
.|+.+.+. ...+||+|++|+|.. + ..+++. .+.++| +|.+++.+ + ++... .
T Consensus 275 ~D~~~~~~---~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~-~l~r~l--~g~~~~i~---~-----~~~~~----~ 336 (373)
T 3tm4_A 275 GDATQLSQ---YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFN-ELAKVL--EKRGVFIT---T-----EKKAI----E 336 (373)
T ss_dssp CCGGGGGG---TCSCEEEEEEECCCC------CCHHHHHHHHHH-HHHHHE--EEEEEEEE---S-----CHHHH----H
T ss_pred CChhhCCc---ccCCcCEEEECCCCCcccCcchhHHHHHHHHHH-HHHHHc--CCeEEEEE---C-----CHHHH----H
Confidence 99988653 246899999999921 1 234444 778878 66776665 1 12111 2
Q ss_pred HHHHHCCCcEeEEeec
Q 021911 268 KKLQQDQFKPFEQVTL 283 (305)
Q Consensus 268 ~~l~~~Gf~~~e~~~l 283 (305)
+.+.+.||++.+...+
T Consensus 337 ~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 337 EAIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHcCCEEEEEEEE
Confidence 3556789998876544
No 204
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.30 E-value=9e-12 Score=114.11 Aligned_cols=102 Identities=27% Similarity=0.364 Sum_probs=80.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++++.+|||+|||+|.++..+++.....++|+++|+|+..++.+.+.++.. +++.+++.|+.+.... ..+||+|
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~---~~~fD~I 148 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE---FSPYDVI 148 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG---GCCEEEE
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc---CCCeEEE
Confidence 5778999999999999999999998654578999999996666665555443 5799999999764322 3689999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+++.+..... . ++.++|||||+|++++
T Consensus 149 v~~~~~~~~~---~-~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 149 FVTVGVDEVP---E-TWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EECSBBSCCC---H-HHHHHEEEEEEEEEEB
T ss_pred EEcCCHHHHH---H-HHHHhcCCCcEEEEEE
Confidence 9988744322 2 5668999999999975
No 205
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.30 E-value=2.1e-13 Score=119.47 Aligned_cols=100 Identities=13% Similarity=-0.046 Sum_probs=78.1
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+.+.++.. +++.+++.|+.+... ..+||+|
T Consensus 76 ~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v 148 (241)
T 3gdh_A 76 SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS----FLKADVV 148 (241)
T ss_dssp HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----GCCCSEE
T ss_pred ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----cCCCCEE
Confidence 3478999999999999999999872 69999999997766666665544 379999999977642 4699999
Q ss_pred EEeCCCh---hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 218 FSDVAQP---DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 218 ~~d~~~~---~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+++++.. +....+. ++.++|+|+|.+++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~-~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 149 FLSPPWGGPDYATAETF-DIRTMMSPDGFEIFRL 181 (241)
T ss_dssp EECCCCSSGGGGGSSSB-CTTTSCSSCHHHHHHH
T ss_pred EECCCcCCcchhhhHHH-HHHhhcCCcceeHHHH
Confidence 9998842 2222444 6889999999977764
No 206
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.29 E-value=3.9e-12 Score=111.67 Aligned_cols=156 Identities=14% Similarity=0.076 Sum_probs=89.0
Q ss_pred ccccCCC-CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEE-ccCCCCcccccCCC
Q 021911 136 VDNIWIK-PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPII-EDARHPAKYRMLVG 212 (305)
Q Consensus 136 l~~~~~~-~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~-~D~~~~~~~~~~~~ 212 (305)
|+.+.+. ++.+|||||||+|.++..+++. ...+|++||+|+ .|++.+.++ +++.... .++...........
T Consensus 29 L~~~~~~~~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~----~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
T 3opn_A 29 LKEFHLEINGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGT----NQLAWKIRSDERVVVMEQFNFRNAVLADFEQG 102 (232)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSC----CCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC
T ss_pred HHHcCCCCCCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCH----HHHHHHHHhCccccccccceEEEeCHhHcCcC
Confidence 3333343 4679999999999999999987 334999999999 555554443 3333221 12222211111111
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCC---------CCchhh---hHHHHHHHHHHCCCcEeEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDS---------TVPAEA---VFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~---------~~~~~~---v~~~~~~~l~~~Gf~~~e~ 280 (305)
.||.+.+|........++. ++.++|||||+|++.++...... ..++.. ...+..+.++++||++...
T Consensus 103 ~~d~~~~D~v~~~l~~~l~-~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 103 RPSFTSIDVSFISLDLILP-PLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp CCSEEEECCSSSCGGGTHH-HHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCEEEEEEEhhhHHHHHH-HHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 3566666655444466666 99999999999999753211000 001111 1122245668899998765
Q ss_pred eec---CCCCCceEEEEEEEc
Q 021911 281 VTL---EPFERDHACVVGGYR 298 (305)
Q Consensus 281 ~~l---~p~~~~~~~vv~~~~ 298 (305)
... .++..-.+++-.++.
T Consensus 182 ~~~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 182 TFSPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp EECSSCBTTTBCCEEEEEEES
T ss_pred EEccCCCCCCCHHHHHHHhhc
Confidence 422 123344555555553
No 207
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.29 E-value=1.1e-10 Score=107.17 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc---CCCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK---RTNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~---~~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...+ .+|||+|||+|.++..+++.+ +..+++++|+ +..+..+.+.... .++|+++..|+.+.. +..||+
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~D~ 236 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEV-----PSNGDI 236 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC-----CSSCSE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC-----CCCCCE
Confidence 3455 899999999999999999986 5679999999 8555544444332 257999999997632 357999
Q ss_pred EEEeCCC---hh--HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh----------------HHHHHHHHHHCCC
Q 021911 217 IFSDVAQ---PD--QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV----------------FQSEVKKLQQDQF 275 (305)
Q Consensus 217 V~~d~~~---~~--~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v----------------~~~~~~~l~~~Gf 275 (305)
|++.... ++ ...++. ++++.|||||+|++.......... +.... ..+..+.++++||
T Consensus 237 v~~~~vl~~~~~~~~~~~l~-~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 314 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLG-NCREAMAGDGRVVVIERTISASEP-SPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGF 314 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHH-HHHHHSCTTCEEEEEECCBCSSSC-CHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTE
T ss_pred EEEchhccCCCHHHHHHHHH-HHHHhcCCCCEEEEEEeccCCCCC-cchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCC
Confidence 9986652 22 336666 999999999999998732111111 11000 1112455688999
Q ss_pred cEeEEeecCCCCCceEEEEEEE
Q 021911 276 KPFEQVTLEPFERDHACVVGGY 297 (305)
Q Consensus 276 ~~~e~~~l~p~~~~~~~vv~~~ 297 (305)
+.++...... .+.++++++
T Consensus 315 ~~~~~~~~~~---~~~~i~~~~ 333 (334)
T 2ip2_A 315 AVERIVDLPM---ETRMIVAAR 333 (334)
T ss_dssp EEEEEEEETT---TEEEEEEEE
T ss_pred ceeEEEECCC---CCEEEEEEe
Confidence 9988876533 366777654
No 208
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.29 E-value=4.2e-11 Score=107.84 Aligned_cols=147 Identities=11% Similarity=0.017 Sum_probs=93.9
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeC-ChHHHHHHHHHH-----HcC-------
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEF-SHRSGRDLVNMA-----KKR------- 191 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~-s~~~~~~l~~~a-----~~~------- 191 (305)
...++..++..+ ...++.+|||||||+|.++..++.. ...+|+++|+ |+.++..+.+++ +..
T Consensus 64 ~~~l~~~l~~~~---~~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 64 ARALADTLCWQP---ELIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHCG---GGTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHhcc---hhcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 445555555422 2456789999999999999988876 3458999999 897776666666 222
Q ss_pred CCeEEEEccCCCCccccc---CCCcEeEEEE-eCCC--hhHHHHHHHHHhccCC---C--CcEEEEEEcccccCCCCchh
Q 021911 192 TNVIPIIEDARHPAKYRM---LVGMVDVIFS-DVAQ--PDQARILALNASYFLK---A--GGHFVISIKANCIDSTVPAE 260 (305)
Q Consensus 192 ~nI~~~~~D~~~~~~~~~---~~~~fD~V~~-d~~~--~~~~~~l~~~a~~~Lk---p--GG~lv~s~~~~~i~~~~~~~ 260 (305)
.+|.++..|+.+...... ...+||+|++ |+.. ++...++. .+.++|| | +|.++++.... ... ..
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~-~l~~~Lk~~~p~~gG~l~v~~~~~---~~~-~~ 213 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLR-SVKMLLALPANDPTAVALVTFTHH---RPH-LA 213 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHH-HHHHHBCCTTTCTTCEEEEEECC----------
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHH-HHHHHhcccCCCCCCEEEEEEEee---ecc-cc
Confidence 268888777655321100 2468999997 5553 34556665 8999999 9 99988765111 100 00
Q ss_pred hhHHHHHHHHHHCC-CcEeEEe
Q 021911 261 AVFQSEVKKLQQDQ-FKPFEQV 281 (305)
Q Consensus 261 ~v~~~~~~~l~~~G-f~~~e~~ 281 (305)
.......+.+++.| |++.++.
T Consensus 214 ~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 214 ERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp --CTHHHHHHHHSTTEEEEEEE
T ss_pred hhHHHHHHHHHhcCCEEEEEec
Confidence 01122245667899 9988764
No 209
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.29 E-value=3.3e-12 Score=116.66 Aligned_cols=110 Identities=16% Similarity=0.152 Sum_probs=78.0
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeC----ChHHHHHHHHHHH-c-C--CCeEE
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEF----SHRSGRDLVNMAK-K-R--TNVIP 196 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~----s~~~~~~l~~~a~-~-~--~nI~~ 196 (305)
++..+..++..++...++++.+|||||||+|.++..+++. +.|++||+ ++.. ++.+. + . ++|.+
T Consensus 64 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~----~~~~~~~~~~~~~v~~ 135 (305)
T 2p41_A 64 VSRGSAKLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGH----EEPIPMSTYGWNLVRL 135 (305)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTS----CCCCCCCSTTGGGEEE
T ss_pred cccHHHHHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhH----HHHHHhhhcCCCCeEE
Confidence 5555555544444435678899999999999999999987 37999999 4421 11111 1 1 46888
Q ss_pred EEc-cCCCCcccccCCCcEeEEEEeCCCh------hHH---HHHHHHHhccCCCCcEEEEEE
Q 021911 197 IIE-DARHPAKYRMLVGMVDVIFSDVAQP------DQA---RILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 197 ~~~-D~~~~~~~~~~~~~fD~V~~d~~~~------~~~---~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++. |+...+ ..+||+|+||++.. ++. .+|. .+.++|||||.|++.+
T Consensus 136 ~~~~D~~~l~-----~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~-~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 136 QSGVDVFFIP-----PERCDTLLCDIGESSPNPTVEAGRTLRVLN-LVENWLSNNTQFCVKV 191 (305)
T ss_dssp ECSCCTTTSC-----CCCCSEEEECCCCCCSSHHHHHHHHHHHHH-HHHHHCCTTCEEEEEE
T ss_pred EeccccccCC-----cCCCCEEEECCccccCcchhhHHHHHHHHH-HHHHHhCCCCEEEEEe
Confidence 888 887653 35899999998741 222 3555 7889999999999865
No 210
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.29 E-value=7.4e-12 Score=111.30 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=76.2
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.++.+|||+|||+|.++..+++.+ +..+|+++|+|+ .+++.++++ +++.+++.|+...+. ...+||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~d~~~~~~---~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSK----VAIKAAAKRYPQVTFCVASSHRLPF---SDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCH----HHHHHHHHHCTTSEEEECCTTSCSB---CTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCH----HHHHHHHHhCCCcEEEEcchhhCCC---CCCceeEEEEe
Confidence 678999999999999999999986 456999999999 555555544 679999999876542 24689999986
Q ss_pred CCChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 221 VAQPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 221 ~~~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.+.. .+. ++.++|||||+|+++++
T Consensus 156 ~~~~----~l~-~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 156 YAPC----KAE-ELARVVKPGGWVITATP 179 (269)
T ss_dssp SCCC----CHH-HHHHHEEEEEEEEEEEE
T ss_pred CChh----hHH-HHHHhcCCCcEEEEEEc
Confidence 6532 344 78899999999999984
No 211
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.28 E-value=5.5e-12 Score=112.62 Aligned_cols=103 Identities=22% Similarity=0.262 Sum_probs=70.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.+.++.+|||||||+|.++..+++.. .+|++||+|+.+++.+.+.+... .+.....|+.... ......+||+|++
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~-~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEI-PKELAGHFDFVLN 116 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCC-CGGGTTCCSEEEE
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc-cceeeeeeccccc-ccccCCCccEEEE
Confidence 57789999999999999999999872 48999999994444333333221 2333333332200 0112468999999
Q ss_pred eCCC-----hhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 220 DVAQ-----PDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 220 d~~~-----~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
+... ++....+. ++.++| |||+|+++.+
T Consensus 117 ~~~l~~~~~~~~~~~l~-~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 117 DRLINRFTTEEARRACL-GMLSLV-GSGTVRASVK 149 (261)
T ss_dssp ESCGGGSCHHHHHHHHH-HHHHHH-TTSEEEEEEE
T ss_pred hhhhHhCCHHHHHHHHH-HHHHhC-cCcEEEEEec
Confidence 8762 34455665 889999 9999999974
No 212
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.27 E-value=1.7e-11 Score=114.94 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=79.1
Q ss_pred CCCCEEEEEecC------CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccc---cCCC
Q 021911 142 KPGARVLYLGAA------SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYR---MLVG 212 (305)
Q Consensus 142 ~~g~~VLDlG~G------~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~---~~~~ 212 (305)
.+..+||||||| +|..++.+++.+.+.++|++||+|+.+ ....++|+++++|+.+++... ...+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m-------~~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS-------HVDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG-------GGCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH-------hhcCCCcEEEEecccccchhhhhhcccC
Confidence 346899999999 788888888776577899999999943 223479999999998864220 0147
Q ss_pred cEeEEEEeCCC--hhHHHHHHHHHhccCCCCcEEEEEEcc
Q 021911 213 MVDVIFSDVAQ--PDQARILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 213 ~fD~V~~d~~~--~~~~~~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
+||+|+++... +++...|. +++++|||||+|++....
T Consensus 288 sFDlVisdgsH~~~d~~~aL~-el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDGSHINAHVRTSFA-ALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECSCCCHHHHHHHHH-HHGGGEEEEEEEEEECGG
T ss_pred CccEEEECCcccchhHHHHHH-HHHHhcCCCeEEEEEecc
Confidence 99999998774 45667776 999999999999998743
No 213
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.27 E-value=1.3e-10 Score=108.14 Aligned_cols=150 Identities=11% Similarity=0.024 Sum_probs=100.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
+..+..+|||||||+|.++..+++.+ |..+++..|+ |..+....+..... ++|+++..|+...+ ...+|+|
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~-----~~~~D~~ 248 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP-----LPEADLY 248 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC-----CCCCSEE
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC-----CCCceEE
Confidence 45667899999999999999999986 6778888887 53333333322221 68999999997643 2467999
Q ss_pred EEeCC---Chh--HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhH---------------HHH-HHHHHHCCCc
Q 021911 218 FSDVA---QPD--QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVF---------------QSE-VKKLQQDQFK 276 (305)
Q Consensus 218 ~~d~~---~~~--~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~---------------~~~-~~~l~~~Gf~ 276 (305)
++... .++ ..++|. ++++.|+|||+|++.......+...+....+ .++ .+.|+++||+
T Consensus 249 ~~~~vlh~~~d~~~~~iL~-~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~ 327 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLE-RIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFR 327 (353)
T ss_dssp EEESSGGGSCHHHHHHHHH-HHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCE
T ss_pred EeeeecccCCHHHHHHHHH-HHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 88544 233 356676 9999999999999987211111111111110 122 3556899999
Q ss_pred EeEEeecCCCCCceEEEEEEEcCC
Q 021911 277 PFEQVTLEPFERDHACVVGGYRMP 300 (305)
Q Consensus 277 ~~e~~~l~p~~~~~~~vv~~~~~~ 300 (305)
.+++..... .+.+++++|-+.
T Consensus 328 ~v~v~~~~~---~~~~i~ArKgt~ 348 (353)
T 4a6d_A 328 DFQFKKTGA---IYDAILARKGTH 348 (353)
T ss_dssp EEEEECCSS---SCEEEEEECCCC
T ss_pred eEEEEEcCC---ceEEEEEEecCc
Confidence 988875543 477888887654
No 214
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.27 E-value=1.3e-10 Score=108.40 Aligned_cols=139 Identities=14% Similarity=0.090 Sum_probs=97.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
..+..+|||||||+|.++..+++.+ |..+++++|+ + .+++.+++.++|+++..|+.++. +.. |+|++.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~D~~~~~-----p~~-D~v~~~ 266 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-P----HVISEAPQFPGVTHVGGDMFKEV-----PSG-DTILMK 266 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTCC-----CCC-SEEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-H----HHHHhhhhcCCeEEEeCCcCCCC-----CCC-CEEEeh
Confidence 5667899999999999999999986 6778999999 6 66777776689999999998632 123 999985
Q ss_pred CCC-----hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh--------h-hH----------HHH-HHHHHHCCC
Q 021911 221 VAQ-----PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAE--------A-VF----------QSE-VKKLQQDQF 275 (305)
Q Consensus 221 ~~~-----~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~--------~-v~----------~~~-~~~l~~~Gf 275 (305)
... ++...+|. ++++.|||||+|++.............. . .+ .++ .+.|+++||
T Consensus 267 ~vlh~~~d~~~~~~L~-~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF 345 (364)
T 3p9c_A 267 WILHDWSDQHCATLLK-NCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGF 345 (364)
T ss_dssp SCGGGSCHHHHHHHHH-HHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTC
T ss_pred HHhccCCHHHHHHHHH-HHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCC
Confidence 552 23446666 9999999999999986321111111100 0 00 122 355689999
Q ss_pred cEeEEeecCCCCCceEEEEE
Q 021911 276 KPFEQVTLEPFERDHACVVG 295 (305)
Q Consensus 276 ~~~e~~~l~p~~~~~~~vv~ 295 (305)
+.+++..+... +.++.+
T Consensus 346 ~~v~~~~~~~~---~~vie~ 362 (364)
T 3p9c_A 346 TGVKSTYIYAN---AWAIEF 362 (364)
T ss_dssp CEEEEEEEETT---EEEEEE
T ss_pred ceEEEEEcCCc---eEEEEE
Confidence 99998876554 454444
No 215
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.27 E-value=3.5e-11 Score=104.41 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=80.9
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK 206 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~ 206 (305)
.+...++..+ .+.++.+|||+|||+|.++..+++.. .+|+++|+|+..+..+.+......++.+++.|+.....
T Consensus 57 ~~~~~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 57 NLGIFMLDEL---DLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG
T ss_pred HHHHHHHHhc---CCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc
Confidence 3444444333 46788999999999999999999984 58999999995555554444433489999999876322
Q ss_pred cccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 207 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
...+||+|+++.+..... . ++.++|||||+|++++
T Consensus 131 ---~~~~fD~v~~~~~~~~~~---~-~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 131 ---EEKPYDRVVVWATAPTLL---C-KPYEQLKEGGIMILPI 165 (231)
T ss_dssp ---GGCCEEEEEESSBBSSCC---H-HHHHTEEEEEEEEEEE
T ss_pred ---cCCCccEEEECCcHHHHH---H-HHHHHcCCCcEEEEEE
Confidence 246899999987743322 2 5668999999999997
No 216
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.26 E-value=1.4e-12 Score=116.84 Aligned_cols=109 Identities=19% Similarity=0.149 Sum_probs=78.6
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C------CeEE
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T------NVIP 196 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~------nI~~ 196 (305)
.+..+..+...++...++++.+|||||||+|.++..+++. ++|++||+++ . + ..+++. . +|.+
T Consensus 56 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m---~-~~a~~~~~~~~~~~~~v~~ 126 (265)
T 2oxt_A 56 VSRGTAKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-L---G-VGGHEVPRITESYGWNIVK 126 (265)
T ss_dssp SSTHHHHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-C---C-CSSCCCCCCCCBTTGGGEE
T ss_pred cchHHHHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-h---h-hhhhhhhhhhhccCCCeEE
Confidence 4444444444444445678999999999999999999987 4899999998 2 1 111111 2 7899
Q ss_pred E--EccCCCCcccccCCCcEeEEEEeCC----Ch--hHH---HHHHHHHhccCCCCc--EEEEEE
Q 021911 197 I--IEDARHPAKYRMLVGMVDVIFSDVA----QP--DQA---RILALNASYFLKAGG--HFVISI 248 (305)
Q Consensus 197 ~--~~D~~~~~~~~~~~~~fD~V~~d~~----~~--~~~---~~l~~~a~~~LkpGG--~lv~s~ 248 (305)
+ +.|+++++ ..+||+|+||++ .+ ++. .+|. .+.++||||| .|++.+
T Consensus 127 ~~~~~D~~~l~-----~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~-~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 127 FKSRVDIHTLP-----VERTDVIMCDVGESSPKWSVESERTIKILE-LLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EECSCCTTTSC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHHHHCTTCEEEEEE
T ss_pred EecccCHhHCC-----CCCCcEEEEeCcccCCccchhHHHHHHHHH-HHHHHhccCCCeEEEEEe
Confidence 9 88998754 468999999876 11 112 3555 8889999999 999876
No 217
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.26 E-value=2.1e-11 Score=116.23 Aligned_cols=128 Identities=16% Similarity=0.094 Sum_probs=91.1
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
+.++.+|||+|||+|.++..+|+.. .+|++||+|+.+++.+.++++.+ -++.+++.|+.+... ..||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-----~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-----KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-----TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-----cCCCEEEE
Confidence 4677899999999999999999872 48999999997777766666543 128999999987642 28999999
Q ss_pred eCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCce
Q 021911 220 DVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDH 290 (305)
Q Consensus 220 d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~ 290 (305)
|+|.....+.+. +....|+|+|.++++. ++. .++..+..|. |++.+...++.|...+
T Consensus 360 dPPr~g~~~~~~-~~l~~l~p~givyvsc---------~p~-tlarDl~~l~---y~l~~~~~~DmFP~T~ 416 (425)
T 2jjq_A 360 DPPRAGLHPRLV-KRLNREKPGVIVYVSC---------NPE-TFARDVKMLD---YRIDEIVALDMFPHTP 416 (425)
T ss_dssp CCCTTCSCHHHH-HHHHHHCCSEEEEEES---------CHH-HHHHHHHHSS---CCEEEEEEECCSTTSS
T ss_pred cCCccchHHHHH-HHHHhcCCCcEEEEEC---------ChH-HHHhHHhhCe---EEEEEEEEECcCCCCc
Confidence 999543222222 2334599999998884 222 2445555554 8887776666665433
No 218
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.26 E-value=6.4e-11 Score=106.39 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=77.5
Q ss_pred CCCEEEEEecCC---CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccc--------ccCC
Q 021911 143 PGARVLYLGAAS---GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKY--------RMLV 211 (305)
Q Consensus 143 ~g~~VLDlG~G~---G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~--------~~~~ 211 (305)
...+|||||||+ |.++..++.. .+..+|++||+|+.++....+.+....++.+++.|+.++... ....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 447999999999 9877665554 467899999999955544444443336899999999875311 1122
Q ss_pred CcEeEEEEeCC---Ch--hHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 212 GMVDVIFSDVA---QP--DQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 212 ~~fD~V~~d~~---~~--~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.+||+|++... .+ +...++. ++++.|||||+|++++.
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~-~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVG-AYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHH-HHHHHSCTTCEEEEEEE
T ss_pred CCCEEEEEechhhhCCcHHHHHHHH-HHHHhCCCCcEEEEEEe
Confidence 58999998664 22 3677777 99999999999999983
No 219
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.25 E-value=3.5e-11 Score=111.50 Aligned_cols=142 Identities=14% Similarity=0.027 Sum_probs=94.6
Q ss_pred cCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH-----cCCCeEEEEccCCCCcccccCCCc
Q 021911 139 IWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK-----KRTNVIPIIEDARHPAKYRMLVGM 213 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~-----~~~nI~~~~~D~~~~~~~~~~~~~ 213 (305)
+.+.+..+|||+|||+|.++..+++.+ +..+++++|+++ ++.... ..++|+++..|+.... + .
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~-----~~~~~~~~~~~~~~~v~~~~~d~~~~~-----p-~ 247 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRAE-----VVARHRLDAPDVAGRWKVVEGDFLREV-----P-H 247 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECHH-----HHTTCCCCCGGGTTSEEEEECCTTTCC-----C-C
T ss_pred CCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecCHH-----HhhcccccccCCCCCeEEEecCCCCCC-----C-C
Confidence 356678999999999999999999986 577899999954 222111 1157999999997321 3 8
Q ss_pred EeEEEEeCC---ChhH--HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh--------------HHHH-HHHHHHC
Q 021911 214 VDVIFSDVA---QPDQ--ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV--------------FQSE-VKKLQQD 273 (305)
Q Consensus 214 fD~V~~d~~---~~~~--~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v--------------~~~~-~~~l~~~ 273 (305)
||+|++... .++. ..+|. ++++.|||||+|++................ -.++ .+.|+++
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~-~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILT-NCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAA 326 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHH-HHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHT
T ss_pred CcEEEEehhccCCCHHHHHHHHH-HHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHC
Confidence 999998655 2333 57776 999999999999998732111111100000 1122 3566899
Q ss_pred CCcEeEEeecCCCCCceEEEEEE
Q 021911 274 QFKPFEQVTLEPFERDHACVVGG 296 (305)
Q Consensus 274 Gf~~~e~~~l~p~~~~~~~vv~~ 296 (305)
||+++++....++ +.++.++
T Consensus 327 Gf~~~~~~~~~~~---~~vie~~ 346 (348)
T 3lst_A 327 GLRLDRVVGTSSV---MSIAVGV 346 (348)
T ss_dssp TEEEEEEEECSSS---CEEEEEE
T ss_pred CCceEEEEECCCC---cEEEEEE
Confidence 9999988763333 4555544
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.25 E-value=5.8e-11 Score=108.80 Aligned_cols=146 Identities=14% Similarity=0.058 Sum_probs=95.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc------CCCeEEEEccCCCCcccccCCCcEeE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK------RTNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~------~~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...+|||||||+|..+..+++.. +..+|++||+|+..++.+.+.... .++|++++.|+...... ...+||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--HKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH--CTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh--cCCCceE
Confidence 45899999999999999999874 457999999999665555554432 25799999998764322 2468999
Q ss_pred EEEeCCChh----H---HHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE--eecCCCC
Q 021911 217 IFSDVAQPD----Q---ARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ--VTLEPFE 287 (305)
Q Consensus 217 V~~d~~~~~----~---~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~--~~l~p~~ 287 (305)
|++|++.+. . .+++. ++.++|||||.|++.. .+... ....+....+.+++. |...+. ..+..|.
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~-~~~~~LkpgG~lv~~~--~~~~~---~~~~~~~~~~~l~~v-F~~v~~~~~~iP~~~ 257 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYE-LLRDALKEDGILSSQG--ESVWL---HLPLIAHLVAFNRKI-FPAVTYAQSIVSTYP 257 (314)
T ss_dssp EEECCC-------------HHH-HHHHHEEEEEEEEEEC--CCTTT---CHHHHHHHHHHHHHH-CSEEEEEEEECTTSG
T ss_pred EEEcCCCCCCcchhhhHHHHHH-HHHhhcCCCeEEEEEC--CCccc---CHHHHHHHHHHHHHH-CCcceEEEEEecCcC
Confidence 999986431 1 45665 8999999999999985 22111 112233334455444 654443 3455554
Q ss_pred Cce-EEEEEEEc
Q 021911 288 RDH-ACVVGGYR 298 (305)
Q Consensus 288 ~~~-~~vv~~~~ 298 (305)
..+ .++++.++
T Consensus 258 ~g~~g~~~ask~ 269 (314)
T 2b2c_A 258 SGSMGYLICAKN 269 (314)
T ss_dssp GGEEEEEEEESS
T ss_pred CCceEEEEEeCC
Confidence 444 56777665
No 221
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.24 E-value=2.4e-11 Score=107.74 Aligned_cols=96 Identities=15% Similarity=0.212 Sum_probs=74.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
++.+|||+|||+|.++..+++. ..+|+++|+|+ .+++.++++..-.+++.|+...+ ....+||+|++...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~----~~l~~a~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~ 123 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSK----EMLEVAREKGVKNVVEAKAEDLP---FPSGAFEAVLALGD 123 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCH----HHHHHHHHHTCSCEEECCTTSCC---SCTTCEEEEEECSS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCH----HHHHHHHhhcCCCEEECcHHHCC---CCCCCEEEEEEcch
Confidence 7789999999999999999987 24899999999 45555544311127888987654 23578999999654
Q ss_pred ----ChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 223 ----QPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 223 ----~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.++...++. ++.++|||||.|++++.
T Consensus 124 ~~~~~~~~~~~l~-~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 124 VLSYVENKDKAFS-EIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHCSCHHHHHH-HHHHHEEEEEEEEEEEE
T ss_pred hhhccccHHHHHH-HHHHHcCCCeEEEEEeC
Confidence 355677777 99999999999999874
No 222
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.24 E-value=5.4e-11 Score=110.30 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=96.9
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
+.+..+|||+|||+|.++..+++.+ +..+++++|+ + .+++.+++.++|+++..|+.+.. + .||+|++.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~-----p-~~D~v~~~ 253 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFTSI-----P-NADAVLLK 253 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTTCC-----C-CCSEEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-H----HHHhhcccCCCcEEEeccccCCC-----C-CccEEEee
Confidence 4567899999999999999999886 5679999999 8 66777766678999999997631 2 49999986
Q ss_pred CC---ChhHH--HHHHHHHhccCCC---CcEEEEEEcccccCCCCc---hhh-h--------------HHHHHHHHHHCC
Q 021911 221 VA---QPDQA--RILALNASYFLKA---GGHFVISIKANCIDSTVP---AEA-V--------------FQSEVKKLQQDQ 274 (305)
Q Consensus 221 ~~---~~~~~--~~l~~~a~~~Lkp---GG~lv~s~~~~~i~~~~~---~~~-v--------------~~~~~~~l~~~G 274 (305)
.. .++.. +++. ++++.||| ||+|++...........+ ... . ..+..+.++++|
T Consensus 254 ~~lh~~~d~~~~~~l~-~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aG 332 (352)
T 1fp2_A 254 YILHNWTDKDCLRILK-KCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAG 332 (352)
T ss_dssp SCGGGSCHHHHHHHHH-HHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTT
T ss_pred hhhccCCHHHHHHHHH-HHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCC
Confidence 65 23333 6776 99999999 999999863211111100 000 0 112245668999
Q ss_pred CcEeEEeecCCCCCceEEEEE
Q 021911 275 FKPFEQVTLEPFERDHACVVG 295 (305)
Q Consensus 275 f~~~e~~~l~p~~~~~~~vv~ 295 (305)
|+.+++.....+ ..++.+
T Consensus 333 f~~~~~~~~~~~---~~vie~ 350 (352)
T 1fp2_A 333 FQHYKISPLTGF---LSLIEI 350 (352)
T ss_dssp CCEEEEEEEETT---EEEEEE
T ss_pred CCeeEEEecCCC---cEEEEE
Confidence 999888764332 455544
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.24 E-value=2.2e-12 Score=116.19 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=78.5
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C------CeE
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T------NVI 195 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~------nI~ 195 (305)
|.+..+..+...++...++++.+|||||||+|.++..+++. ++|++||+|+ . +..++++ . +|.
T Consensus 63 ~~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m----~~~a~~~~~~~~~~~~~v~ 133 (276)
T 2wa2_A 63 AVSRGTAKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-L----GTSGHEKPRLVETFGWNLI 133 (276)
T ss_dssp --CHHHHHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-C----CCTTSCCCCCCCCTTGGGE
T ss_pred cCchHHHHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-h----hhhhhhchhhhhhcCCCeE
Confidence 35555555544444445678999999999999999999987 4899999998 2 1112111 2 789
Q ss_pred EE--EccCCCCcccccCCCcEeEEEEeCC----Ch--hHH---HHHHHHHhccCCCCc--EEEEEE
Q 021911 196 PI--IEDARHPAKYRMLVGMVDVIFSDVA----QP--DQA---RILALNASYFLKAGG--HFVISI 248 (305)
Q Consensus 196 ~~--~~D~~~~~~~~~~~~~fD~V~~d~~----~~--~~~---~~l~~~a~~~LkpGG--~lv~s~ 248 (305)
++ +.|+++++ ..+||+|+||++ .+ ++. .+|. .+.++||||| .|++.+
T Consensus 134 ~~~~~~D~~~l~-----~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~-~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 134 TFKSKVDVTKME-----PFQADTVLCDIGESNPTAAVEASRTLTVLN-VISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEECSCCGGGCC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHHHHSTTCEEEEEE
T ss_pred EEeccCcHhhCC-----CCCcCEEEECCCcCCCchhhhHHHHHHHHH-HHHHHhccCCCcEEEEEe
Confidence 99 88987653 468999999876 11 112 3555 8889999999 999876
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.24 E-value=2.4e-10 Score=102.09 Aligned_cols=135 Identities=11% Similarity=0.038 Sum_probs=94.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----------CCeEEEEccCCCCcccccCCC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----------TNVIPIIEDARHPAKYRMLVG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----------~nI~~~~~D~~~~~~~~~~~~ 212 (305)
...+|||||||+|.++..+++. + .+|++||+++ .+++.++++ +++++++.|+.... +
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~----~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------~ 138 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADE----KILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------K 138 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCH----HHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------C
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCH----HHHHHHHHHHHhhccccCCCeEEEEechHHHHH------h
Confidence 4579999999999999999987 4 6999999999 555555432 47899999987653 6
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEee-cCCCCCceE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQVT-LEPFERDHA 291 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~-l~p~~~~~~ 291 (305)
+||+|++|.+.|.. .+. ++.+.|||||.|++... +... . ...+......+++. |....... .-|....+.
T Consensus 139 ~fD~Ii~d~~dp~~--~~~-~~~~~L~pgG~lv~~~~--~~~~--~-~~~~~~~~~~l~~~-F~~~~~~~~~vP~~g~~~ 209 (262)
T 2cmg_A 139 KYDLIFCLQEPDIH--RID-GLKRMLKEDGVFISVAK--HPLL--E-HVSMQNALKNMGGV-FSVAMPFVAPLRILSNKG 209 (262)
T ss_dssp CEEEEEESSCCCHH--HHH-HHHTTEEEEEEEEEEEE--CTTT--C-HHHHHHHHHHHHTT-CSEEEEECCTTCTTCCEE
T ss_pred hCCEEEECCCChHH--HHH-HHHHhcCCCcEEEEEcC--Cccc--C-HHHHHHHHHHHHHh-CCceEEEEEccCCCcccE
Confidence 89999999876653 555 99999999999999752 2111 1 12344445555554 76555432 233344566
Q ss_pred EEEEEEcC
Q 021911 292 CVVGGYRM 299 (305)
Q Consensus 292 ~vv~~~~~ 299 (305)
++++.+..
T Consensus 210 ~~~as~~~ 217 (262)
T 2cmg_A 210 YIYASFKT 217 (262)
T ss_dssp EEEEESSC
T ss_pred EEEeeCCC
Confidence 67777653
No 225
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.23 E-value=2.3e-11 Score=107.24 Aligned_cols=106 Identities=12% Similarity=0.025 Sum_probs=76.0
Q ss_pred CCCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCC------C---------------------
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRT------N--------------------- 193 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~------n--------------------- 193 (305)
.++.+|||+|||+|.++..++..+ .+..+|+++|+|+.+++.+.+.+.... +
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 356899999999999999999872 134689999999966655554433220 1
Q ss_pred ----eE-------------EEEccCCCCcccc-c-CCCcEeEEEEeCCC------------hhHHHHHHHHHhccCCCCc
Q 021911 194 ----VI-------------PIIEDARHPAKYR-M-LVGMVDVIFSDVAQ------------PDQARILALNASYFLKAGG 242 (305)
Q Consensus 194 ----I~-------------~~~~D~~~~~~~~-~-~~~~fD~V~~d~~~------------~~~~~~l~~~a~~~LkpGG 242 (305)
|. +++.|+.+..... . ...+||+|++++|. .....++. ++.++|||||
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG 208 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR-SLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH-HHHHHSCTTC
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH-HHHHhcCCCc
Confidence 66 9999987753210 0 13489999999872 12335555 8999999999
Q ss_pred EEEEEE
Q 021911 243 HFVISI 248 (305)
Q Consensus 243 ~lv~s~ 248 (305)
+|+++.
T Consensus 209 ~l~~~~ 214 (250)
T 1o9g_A 209 VIAVTD 214 (250)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 999954
No 226
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.23 E-value=3.4e-10 Score=114.06 Aligned_cols=105 Identities=10% Similarity=0.037 Sum_probs=79.5
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc--------CCCeEEEEccCCCCcccccCCC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK--------RTNVIPIIEDARHPAKYRMLVG 212 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~--------~~nI~~~~~D~~~~~~~~~~~~ 212 (305)
..++.+|||||||+|.++..|++...+..+|++||+|+.+++.+.+.++. .++|.+++.|+.+.+. ...
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~---~d~ 795 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS---RLH 795 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT---TSC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc---ccC
Confidence 45789999999999999999998854456999999999655554442221 1579999999988653 257
Q ss_pred cEeEEEEeCCC---h--hHHHHHHHHHhccCCCCcEEEEEEcc
Q 021911 213 MVDVIFSDVAQ---P--DQARILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 213 ~fD~V~~d~~~---~--~~~~~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
.||+|++.... + ....++. ++.++|||| .|+++++.
T Consensus 796 sFDlVV~~eVLeHL~dp~l~~~L~-eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 796 DVDIGTCLEVIEHMEEDQACEFGE-KVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp SCCEEEEESCGGGSCHHHHHHHHH-HHHHTTCCS-EEEEEECB
T ss_pred CeeEEEEeCchhhCChHHHHHHHH-HHHHHcCCC-EEEEEecC
Confidence 99999996651 2 2234555 999999999 88888853
No 227
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.23 E-value=5.7e-11 Score=113.12 Aligned_cols=117 Identities=16% Similarity=0.153 Sum_probs=82.8
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHH-------HHHHHc----CCCeE
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDL-------VNMAKK----RTNVI 195 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l-------~~~a~~----~~nI~ 195 (305)
.+++.++.. +.+.++.+|||||||+|..+..+|..++ ..+|++||+|+..+..+ .+.++. ..||+
T Consensus 229 ~~v~~ml~~---l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 229 NFLSDVYQQ---CQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHHHH---TTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHHHHh---cCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 344445433 3577899999999999999999999864 45899999999665443 222222 15899
Q ss_pred EEEccCCC-CcccccCCCcEeEEEEeCC--ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 196 PIIEDARH-PAKYRMLVGMVDVIFSDVA--QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 196 ~~~~D~~~-~~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++++|... .........+||+|+++.. .++....|. ++.+.|||||.|++..
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~-el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVE-KILQTAKVGCKIISLK 359 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHH-HHHTTCCTTCEEEESS
T ss_pred EEEcCccccccccccccCCCCEEEEeCccccccHHHHHH-HHHHhCCCCeEEEEee
Confidence 99886543 2111111368999999643 366666776 9999999999999874
No 228
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.23 E-value=5.7e-11 Score=110.26 Aligned_cols=101 Identities=22% Similarity=0.230 Sum_probs=79.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...++.+|||+|||+|.++..+++. +..+|++||+|+ .+..+.+.++.. ++|++++.|+.+.+ +..+||+
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----~~~~~D~ 119 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS----LPEQVDI 119 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC----CSSCEEE
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC----CCCceeE
Confidence 4567899999999999999999986 456999999996 555555555443 57999999998764 2368999
Q ss_pred EEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVA-----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.+ .+.....+. ++.++|||||.|++++
T Consensus 120 Ivs~~~~~~~~~~~~~~~l~-~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 120 IISEPMGYMLFNERMLESYL-HAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EEECCCBTTBTTTSHHHHHH-HGGGGEEEEEEEESCE
T ss_pred EEEeCchhcCChHHHHHHHH-HHHhhcCCCeEEEEec
Confidence 999865 244566776 8899999999998654
No 229
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.23 E-value=1.7e-10 Score=107.83 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=77.4
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
+.+..+|||+|||+|.++..+++.. +..+++++|+ + .+++.+++.++|++++.|+.++ . +. ||+|++.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~--~---~~-~D~v~~~ 274 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-P----QVIENAPPLSGIEHVGGDMFAS--V---PQ-GDAMILK 274 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTC--C---CC-EEEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-H----HHHHhhhhcCCCEEEeCCcccC--C---CC-CCEEEEe
Confidence 4567899999999999999999986 5678999999 7 6666676667899999999763 1 23 9999986
Q ss_pred CC---ChhHH--HHHHHHHhccCCCCcEEEEEE
Q 021911 221 VA---QPDQA--RILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 221 ~~---~~~~~--~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.. .++.. .+|. +++++|||||+|++..
T Consensus 275 ~~lh~~~d~~~~~~l~-~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLS-NCHKALSPNGKVIIVE 306 (372)
T ss_dssp SSGGGSCHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHH-HHHHhcCCCCEEEEEE
Confidence 65 23333 6776 9999999999999985
No 230
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.23 E-value=3.9e-11 Score=104.81 Aligned_cols=111 Identities=25% Similarity=0.289 Sum_probs=81.0
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCC
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHP 204 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~ 204 (305)
.+.+.++..+ .+.++.+|||+|||+|.++..+++..+ .+|+++|+|+..++.+.+..+.. .++.+++.|+...
T Consensus 78 ~~~~~~~~~l---~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 152 (235)
T 1jg1_A 78 HMVAIMLEIA---NLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG 152 (235)
T ss_dssp HHHHHHHHHH---TCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhc---CCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC
Confidence 3444444333 577889999999999999999999874 68999999996666555555443 5799999997322
Q ss_pred cccccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 205 AKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 205 ~~~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.+. ...||+|+++.+.+... . ++.+.|||||+|++++.
T Consensus 153 ~~~---~~~fD~Ii~~~~~~~~~---~-~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 153 FPP---KAPYDVIIVTAGAPKIP---E-PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CGG---GCCEEEEEECSBBSSCC---H-HHHHTEEEEEEEEEEEC
T ss_pred CCC---CCCccEEEECCcHHHHH---H-HHHHhcCCCcEEEEEEe
Confidence 211 24699999987744322 1 55689999999999983
No 231
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=4e-11 Score=111.39 Aligned_cols=102 Identities=19% Similarity=0.163 Sum_probs=80.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++. +..+|++||+|+ ++..+.+.++.. .+|.+++.|+.+.+. ...+||+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~ 136 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL---PVEKVDI 136 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC---SSSCEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccC---CCCceEE
Confidence 3567899999999999999999987 456999999995 766666666554 359999999988742 2479999
Q ss_pred EEEeCC------ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVA------QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~------~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.. ..+...++. ++.++|||||.|+...
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~-~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLH-ARDKWLAPDGLIFPDR 173 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHH-HHHHHEEEEEEEESCE
T ss_pred EEEccccccccCchhHHHHHH-HHHHhCCCCCEEcccc
Confidence 999764 245556665 8889999999997543
No 232
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.22 E-value=3.6e-11 Score=108.53 Aligned_cols=107 Identities=18% Similarity=0.120 Sum_probs=73.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhh---CCCcEE--EEEeCChHHHHHHHHHHHcC---CCeEEE--EccCCCCcc---c
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIV---GPNGVV--YAVEFSHRSGRDLVNMAKKR---TNVIPI--IEDARHPAK---Y 207 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~---~~~~~V--~avD~s~~~~~~l~~~a~~~---~nI~~~--~~D~~~~~~---~ 207 (305)
+.++.+|||||||+|.++..++..+ .+...| +++|+|+.+++.+.+.++.. +++.+. ..|+..... .
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3567899999999998776554332 144544 99999996655555554432 356554 334332210 0
Q ss_pred ccCCCcEeEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 208 RMLVGMVDVIFSDVA---QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 208 ~~~~~~fD~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
....++||+|++... .++....|. +++++|||||+|++++
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~-~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLK-FFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHH-HHHHTEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHH-HHHHHcCCCcEEEEEE
Confidence 012578999999766 567788887 9999999999999986
No 233
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.20 E-value=4.2e-10 Score=105.33 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=77.7
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.++.+|||+| |+|.++..++.. ++..+|++||+|+.+++.+.++++.. .+|++++.|+.+..+. ....+||+|++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~-~~~~~fD~Vi~ 247 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD-YALHKFDTFIT 247 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT-TTSSCBSEEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh-hccCCccEEEE
Confidence 4678999999 999999999876 35579999999997766666555543 3899999999873211 12358999999
Q ss_pred eCCCh--hHHHHHHHHHhccCCCCcE-EEEEE
Q 021911 220 DVAQP--DQARILALNASYFLKAGGH-FVISI 248 (305)
Q Consensus 220 d~~~~--~~~~~l~~~a~~~LkpGG~-lv~s~ 248 (305)
|+|.. ....++. ++.++|||||+ +++++
T Consensus 248 ~~p~~~~~~~~~l~-~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 248 DPPETLEAIRAFVG-RGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCCSSHHHHHHHHH-HHHHTBCSTTCEEEEEE
T ss_pred CCCCchHHHHHHHH-HHHHHcccCCeEEEEEE
Confidence 99853 2344555 89999999995 46665
No 234
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.20 E-value=1e-10 Score=108.25 Aligned_cols=100 Identities=19% Similarity=0.173 Sum_probs=78.1
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++. +..+|++||+|+ ++..+.+.++.. ++|.+++.|+.+.+. ..++||+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~ 134 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL---PVEKVDV 134 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC---SCSCEEE
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC---CCCcEEE
Confidence 4567899999999999999999987 345899999996 666666655544 689999999987632 2468999
Q ss_pred EEEeCC------ChhHHHHHHHHHhccCCCCcEEEE
Q 021911 217 IFSDVA------QPDQARILALNASYFLKAGGHFVI 246 (305)
Q Consensus 217 V~~d~~------~~~~~~~l~~~a~~~LkpGG~lv~ 246 (305)
|+++.. ..+...++. ++.++|||||.|+.
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~-~~~~~LkpgG~lip 169 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLY-AKNKYLAKGGSVYP 169 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHH-HHHHHEEEEEEEES
T ss_pred EEEcCchhhccCHHHHHHHHH-HHHhhcCCCcEEEc
Confidence 999762 233445665 88999999999983
No 235
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.20 E-value=3.8e-11 Score=112.62 Aligned_cols=101 Identities=23% Similarity=0.197 Sum_probs=80.0
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||||||+|.++..+++. ...+|++||+| .++..+.+.++.. .+|++++.|+.+... ..+||+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~ 132 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL----PEKVDV 132 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC----SSCEEE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc----CCcceE
Confidence 4677899999999999999999987 34599999999 7777776666554 459999999977642 378999
Q ss_pred EEEeCC------ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVA------QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~------~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.. ..+...++. ++.++|||||.|+++.
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~-~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVIS-ARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHH-HHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHH-HHHhhCCCCeEEEEec
Confidence 999764 133455565 8889999999998865
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.19 E-value=2.2e-10 Score=106.05 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=78.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCC----cEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPN----GVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~----~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
+.++.+|||+|||+|.++..+++.+... .+|+++|+++.+++.+...+... .++.+++.|+.... ....||
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~----~~~~fD 203 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL----LVDPVD 203 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC----CCCCEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc----ccCCcc
Confidence 4467899999999999999999887432 68999999995554444333221 36889999986643 246899
Q ss_pred EEEEeCCC---h--h----------------HHHHHHHHHhccCCCCcEEEEEEcc
Q 021911 216 VIFSDVAQ---P--D----------------QARILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 216 ~V~~d~~~---~--~----------------~~~~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
+|++|+|. + + +...+. ++.++|||+|++++.++.
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~-~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIE-QGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHH-HHHHTEEEEEEEEEEEEG
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHH-HHHHHhCCCCEEEEEECc
Confidence 99999992 1 1 123454 899999999999999854
No 237
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.19 E-value=7.7e-11 Score=113.99 Aligned_cols=101 Identities=22% Similarity=0.230 Sum_probs=79.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...++.+|||+|||+|.++..+++. +..+|++||+|+ ++..+.+.++.. ++|++++.|+.+.. +..+||+
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~----~~~~fD~ 227 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS----LPEQVDI 227 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC----CSSCEEE
T ss_pred hhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc----cCCCeEE
Confidence 3457789999999999999999885 456999999998 665555555544 57999999998753 2368999
Q ss_pred EEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVA-----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.+ .++....+. ++.++|||||.|++..
T Consensus 228 Ivs~~~~~~~~~e~~~~~l~-~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 228 IISEPMGYMLFNERMLESYL-HAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EECCCCHHHHTCHHHHHHHH-HGGGGEEEEEEEESCE
T ss_pred EEEeCchHhcCcHHHHHHHH-HHHHhcCCCCEEEEEe
Confidence 999877 244566676 8899999999998644
No 238
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.18 E-value=3.6e-11 Score=111.30 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=79.3
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
..++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.+.+.+... .++.++..|+.... ..+||+|++
T Consensus 194 ~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-----~~~fD~Iv~ 267 (343)
T 2pjd_A 194 PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-----KGRFDMIIS 267 (343)
T ss_dssp TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-----CSCEEEEEE
T ss_pred cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-----cCCeeEEEE
Confidence 4567799999999999999999884 5669999999996666665555443 34677888886542 468999999
Q ss_pred eCCCh--------hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DVAQP--------DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~~~~--------~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+++.. +...++. ++.++|||||.|++.+
T Consensus 268 ~~~~~~g~~~~~~~~~~~l~-~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 268 NPPFHDGMQTSLDAAQTLIR-GAVRHLNSGGELRIVA 303 (343)
T ss_dssp CCCCCSSSHHHHHHHHHHHH-HHGGGEEEEEEEEEEE
T ss_pred CCCcccCccCCHHHHHHHHH-HHHHhCCCCcEEEEEE
Confidence 98732 2345565 9999999999999987
No 239
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.17 E-value=2.4e-10 Score=96.99 Aligned_cols=92 Identities=15% Similarity=0.081 Sum_probs=67.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
...++.+|||+|||+|.++..++.. +..+|+++|+|+ .+++.++++ .++.+++.|+.+.+ .+||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~d~~~~~------~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDP----DAIETAKRNCGGVNFMVADVSEIS------GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCH----HHHHHHHHHCTTSEEEECCGGGCC------CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCH----HHHHHHHHhcCCCEEEECcHHHCC------CCeeEEE
Confidence 3457789999999999999999987 345799999999 444444443 28999999987642 6899999
Q ss_pred EeCCCh-----hHHHHHHHHHhccCCCCcEEEEE
Q 021911 219 SDVAQP-----DQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 219 ~d~~~~-----~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+|.. .....+. .+.+.| |.++++
T Consensus 116 ~~~p~~~~~~~~~~~~l~-~~~~~~---g~~~~~ 145 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFID-KAFETS---MWIYSI 145 (200)
T ss_dssp ECCCC-------CHHHHH-HHHHHE---EEEEEE
T ss_pred ECCCchhccCchhHHHHH-HHHHhc---CcEEEE
Confidence 999821 1234555 777777 444444
No 240
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.17 E-value=7.1e-11 Score=98.29 Aligned_cols=116 Identities=17% Similarity=0.151 Sum_probs=78.3
Q ss_pred ccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEe
Q 021911 138 NIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.+.++++.+|||++||. | .+|+|+ .|++.++++ .++.+++.|+.+.+......++||
T Consensus 7 ~~g~~~g~~vL~~~~g~----------------v-~vD~s~----~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS----------------S-PVEALK----GLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TTTCCTTSEEEEEECTT----------------S-CHHHHH----HHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred ccCCCCCCEEEEecCCc----------------e-eeeCCH----HHHHHHHHhcccCcEEEEechhcCccccCCCCCEe
Confidence 34678999999999985 1 289999 555555543 369999999987653111357899
Q ss_pred EEEEeCC---C-hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCC
Q 021911 216 VIFSDVA---Q-PDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQF 275 (305)
Q Consensus 216 ~V~~d~~---~-~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf 275 (305)
+|++... . ++..+++. +++++|||||+|++..+...............+..+.|+++||
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~-~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILA-EIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHH-HHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred EEEECChhhhcccCHHHHHH-HHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 9999654 2 56677777 9999999999999976321111000000112334577789999
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=1.7e-10 Score=109.08 Aligned_cols=110 Identities=18% Similarity=0.187 Sum_probs=81.2
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK 206 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~ 206 (305)
.++..++..+. ..++.+|||+|||+|.++..+++.+.+..+|+++|+++ .+++.+ .++.+++.|+.....
T Consensus 26 ~l~~~~~~~~~---~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~----~~~~~a---~~~~~~~~D~~~~~~ 95 (421)
T 2ih2_A 26 EVVDFMVSLAE---APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDP----KALDLP---PWAEGILADFLLWEP 95 (421)
T ss_dssp HHHHHHHHHCC---CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCT----TTCCCC---TTEEEEESCGGGCCC
T ss_pred HHHHHHHHhhc---cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCH----HHHHhC---CCCcEEeCChhhcCc
Confidence 45555554332 34567999999999999999999875557999999999 444333 579999999876532
Q ss_pred cccCCCcEeEEEEeCCC--------------hhHHH-----------------HHHHHHhccCCCCcEEEEEEcc
Q 021911 207 YRMLVGMVDVIFSDVAQ--------------PDQAR-----------------ILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~~--------------~~~~~-----------------~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
...||+|++|+|. .+... .+..++.++|+|+|++++.++.
T Consensus 96 ----~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 96 ----GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp ----SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ----cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3689999999882 11111 2333889999999999999853
No 242
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.15 E-value=1.5e-10 Score=106.56 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=77.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...++.+|||+|||+|.++..+++. +..+|++||+|+ ++..+.+.++.. .+|++++.|+.+.+. ...+||+
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~ 108 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL---PFPKVDI 108 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC---SSSCEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhccC---CCCcccE
Confidence 3457789999999999999999986 445899999994 666666555544 469999999987642 2468999
Q ss_pred EEEeCC------ChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 217 IFSDVA------QPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 217 V~~d~~------~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|+++.+ ......++. ++.++|||||.|+..
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~-~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLY-ARDHYLVEGGLIFPD 144 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHH-HHHHHEEEEEEEESC
T ss_pred EEEeCchhhcccHHHHHHHHH-HHHhhcCCCeEEEEe
Confidence 999864 223455665 888999999999843
No 243
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.15 E-value=2.4e-10 Score=106.20 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=95.6
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
..+..+|||+|||+|.++..+++.+ +..+++++|+ + .+++.+++.++|+++..|+.++ . ..||+|++.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~--~----~~~D~v~~~ 258 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFKS--I----PSADAVLLK 258 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTTC--C----CCCSEEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-H----HHHhhcccCCCcEEEeCccCCC--C----CCceEEEEc
Confidence 3466899999999999999999986 5678999999 6 5566666557899999999762 1 259999986
Q ss_pred CC---ChhH--HHHHHHHHhccCCC---CcEEEEEEcccccCCCCc---hhhh----------------HHHHHHHHHHC
Q 021911 221 VA---QPDQ--ARILALNASYFLKA---GGHFVISIKANCIDSTVP---AEAV----------------FQSEVKKLQQD 273 (305)
Q Consensus 221 ~~---~~~~--~~~l~~~a~~~Lkp---GG~lv~s~~~~~i~~~~~---~~~v----------------~~~~~~~l~~~ 273 (305)
.. .++. .++|. ++++.||| ||+|++...........+ .... ..+..+.|+++
T Consensus 259 ~vlh~~~d~~~~~~l~-~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~a 337 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILK-NSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDA 337 (358)
T ss_dssp SCGGGSCHHHHHHHHH-HHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHH-HHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHc
Confidence 65 3343 37776 99999999 999999763211111100 0000 01123556889
Q ss_pred CCcEeEEeecCCCCCceEEEEE
Q 021911 274 QFKPFEQVTLEPFERDHACVVG 295 (305)
Q Consensus 274 Gf~~~e~~~l~p~~~~~~~vv~ 295 (305)
||+.+++.....+ ..++.+
T Consensus 338 Gf~~~~~~~~~~~---~~vie~ 356 (358)
T 1zg3_A 338 GFSSYKITPISGF---KSLIEV 356 (358)
T ss_dssp TCCEEEEEEETTT---EEEEEE
T ss_pred CCCeeEEEecCCC---cEEEEE
Confidence 9999988765333 444544
No 244
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=108.89 Aligned_cols=99 Identities=23% Similarity=0.239 Sum_probs=74.0
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
..++.+|||||||+|.++..+|+. ...+|||||.|+ .+..+.+.++.+ .+|++++.|+++.. ++.+||+|
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~----lpe~~Dvi 153 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE----LPEQVDAI 153 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC----CSSCEEEE
T ss_pred hcCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec----CCccccEE
Confidence 346899999999999998877775 345899999996 444455555544 57999999998764 35799999
Q ss_pred EEeCC-----Ch-hHHHHHHHHHhccCCCCcEEEEE
Q 021911 218 FSDVA-----QP-DQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 218 ~~d~~-----~~-~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+++.. .. ....++. ...++|||+|.++-+
T Consensus 154 vsE~~~~~l~~e~~l~~~l~-a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLH-ARTKWLKEGGLLLPA 188 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHH-HHHHHEEEEEEEESC
T ss_pred EeecccccccccchhhhHHH-HHHhhCCCCceECCc
Confidence 99654 22 3444444 677999999998753
No 245
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.12 E-value=2.5e-09 Score=99.12 Aligned_cols=147 Identities=19% Similarity=0.205 Sum_probs=96.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----------CCeEEEEccCCCCcccc-cCC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----------TNVIPIIEDARHPAKYR-MLV 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----------~nI~~~~~D~~~~~~~~-~~~ 211 (305)
...+||+||||+|.++..+++.- ..+|++||+++..++-+.+..... +++++++.|+....... ...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 45899999999999999999872 368999999995554444443210 26999999997764320 024
Q ss_pred CcEeEEEEeCCC-h--------hHHHHHHHHH----hccCCCCcEEEEEEcccccCCCCchhhhHHHHHHH-HHHCCCcE
Q 021911 212 GMVDVIFSDVAQ-P--------DQARILALNA----SYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKK-LQQDQFKP 277 (305)
Q Consensus 212 ~~fD~V~~d~~~-~--------~~~~~l~~~a----~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~-l~~~Gf~~ 277 (305)
.+||+||+|++. | ...+.+. .+ .++|+|+|.|++.. ++... + .+ ....+. |++ -|..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~-~~~~~~~~~L~pgGilv~qs--~s~~~---~-e~-~~~~~~~l~~-~F~~ 336 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLR-LILDLSMKVLKQDGKYFTQG--NCVNL---T-EA-LSLYEEQLGR-LYCP 336 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHH-HHHHHHHHTEEEEEEEEEEE--EETTC---H-HH-HHHHHHHHTT-SSSC
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHH-HHHHHHHhhCCCCcEEEEEc--CCcch---H-HH-HHHHHHHHHH-hCCc
Confidence 689999999864 2 1123333 44 89999999999986 44222 1 11 122232 433 3554
Q ss_pred eEE----eecCCCCCceEEEEEEEcCC
Q 021911 278 FEQ----VTLEPFERDHACVVGGYRMP 300 (305)
Q Consensus 278 ~e~----~~l~p~~~~~~~vv~~~~~~ 300 (305)
... ..+..|...+.+.++.|+.+
T Consensus 337 v~~~~~~~~vPsy~~~w~f~~~~k~~~ 363 (364)
T 2qfm_A 337 VEFSKEIVCVPSYLELWVFYTVWKKAK 363 (364)
T ss_dssp EEEEEEEECCGGGSSCEEEEEEEECCC
T ss_pred eEEeeEeeecCCchhheEeEEeecccC
Confidence 443 55777766788888877643
No 246
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.11 E-value=3.4e-10 Score=95.82 Aligned_cols=134 Identities=12% Similarity=0.046 Sum_probs=82.9
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--C-CeEEEEccCCCCcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--T-NVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~-nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
+.+..+|||||||+|.++..++... |..+|+|+|+|+++++-..+.+... . ++.+ .|.... ....+||+|
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~----~~~~~~DvV 119 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD----VYKGTYDVV 119 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH----HTTSEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc----CCCCCcChh
Confidence 4567899999999999999998875 5669999999996655555555443 2 4444 555332 235789999
Q ss_pred EEeCCC---hhHHHHHHHHHhccCCCCcEEEEEEcccccCCCC-chhhhHHHHHHHHHHCCCcEeEEeec
Q 021911 218 FSDVAQ---PDQARILALNASYFLKAGGHFVISIKANCIDSTV-PAEAVFQSEVKKLQQDQFKPFEQVTL 283 (305)
Q Consensus 218 ~~d~~~---~~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~-~~~~v~~~~~~~l~~~Gf~~~e~~~l 283 (305)
++.... .++...+. .+.+.|||+|.||-. +..++.... -.+.-.....+..-...+.+++.+.+
T Consensus 120 La~k~LHlL~~~~~al~-~v~~~L~pggvfISf-ptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~ 187 (200)
T 3fzg_A 120 FLLKMLPVLKQQDVNIL-DFLQLFHTQNFVISF-PIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVI 187 (200)
T ss_dssp EEETCHHHHHHTTCCHH-HHHHTCEEEEEEEEE-ECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEE
T ss_pred hHhhHHHhhhhhHHHHH-HHHHHhCCCCEEEEe-ChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeee
Confidence 986662 23334455 888999999766544 222322222 11222222333333455666666644
No 247
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.10 E-value=3.7e-10 Score=101.99 Aligned_cols=83 Identities=14% Similarity=0.221 Sum_probs=64.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.+.++.+|||+|||+|.++..+++.. .+|++||+|+.++..+.+.+... +++++++.|+...+ ...||+
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~-----~~~fD~ 96 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD-----LPFFDT 96 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-----CCCCSE
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-----chhhcE
Confidence 46788999999999999999999983 48999999996665555554332 47999999998753 237999
Q ss_pred EEEeCCChhHHHHH
Q 021911 217 IFSDVAQPDQARIL 230 (305)
Q Consensus 217 V~~d~~~~~~~~~l 230 (305)
|++++|......++
T Consensus 97 vv~nlpy~~~~~~~ 110 (285)
T 1zq9_A 97 CVANLPYQISSPFV 110 (285)
T ss_dssp EEEECCGGGHHHHH
T ss_pred EEEecCcccchHHH
Confidence 99999965444443
No 248
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.10 E-value=3.2e-10 Score=101.88 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=73.1
Q ss_pred CCCEEEEEecCCCc----cHHHHHhhhCC---CcEEEEEeCChHHHHHHHHHHH--------------------c-----
Q 021911 143 PGARVLYLGAASGT----TVSHVSDIVGP---NGVVYAVEFSHRSGRDLVNMAK--------------------K----- 190 (305)
Q Consensus 143 ~g~~VLDlG~G~G~----~t~~la~~~~~---~~~V~avD~s~~~~~~l~~~a~--------------------~----- 190 (305)
+..+|||+|||+|. .+..|++.++. ..+|+|+|+|+.+++.+.+.+. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55566666542 3589999999955444433210 0
Q ss_pred --------CCCeEEEEccCCCCcccccCCCcEeEEEEeCC-----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 191 --------RTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA-----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 191 --------~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.+|.|.+.|+.+++ .. ....||+|+|... .+.+.+++. ++++.|||||+|++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~-~~-~~~~fDlI~crnvliyf~~~~~~~vl~-~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ-YN-VPGPFDAIFCRNVMIYFDKTTQEDILR-RFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS-CC-CCCCEEEEEECSSGGGSCHHHHHHHHH-HHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCC-CC-cCCCeeEEEECCchHhCCHHHHHHHHH-HHHHHhCCCcEEEEEe
Confidence 026899999998742 11 1368999999544 245677777 9999999999999864
No 249
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.06 E-value=2.1e-10 Score=101.98 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=82.4
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEc
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIE 199 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~ 199 (305)
|+|..+..|++..++..++++.+|||||||+|.++..+++.. +...|+++|++. ++....... .++..++.
T Consensus 55 YrSRaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGv----Dl~~~pi~~~~~g~~ii~~~~ 129 (277)
T 3evf_A 55 AVSRGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGR----DGHEKPMNVQSLGWNIITFKD 129 (277)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC----TTCCCCCCCCBTTGGGEEEEC
T ss_pred ccccHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEec----cCcccccccCcCCCCeEEEec
Confidence 477888888877777678899999999999999999998764 345788999885 331001110 26676777
Q ss_pred cCCCCcccccCCCcEeEEEEeCCCh------hHHH---HHHHHHhccCCCC-cEEEEEE
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVAQP------DQAR---ILALNASYFLKAG-GHFVISI 248 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~~~------~~~~---~l~~~a~~~LkpG-G~lv~s~ 248 (305)
|+.... +...+||+|+||++.. |+.+ +|. .|.++|||| |.|++.+
T Consensus 130 ~~dv~~---l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~-~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 130 KTDIHR---LEPVKCDTLLCDIGESSSSSVTEGERTVRVLD-TVEKWLACGVDNFCVKV 184 (277)
T ss_dssp SCCTTT---SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHHTTCCSEEEEEE
T ss_pred cceehh---cCCCCccEEEecCccCcCchHHHHHHHHHHHH-HHHHHhCCCCCeEEEEe
Confidence 653221 2356899999998632 3333 334 788999999 9999987
No 250
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.05 E-value=1.6e-10 Score=108.76 Aligned_cols=103 Identities=14% Similarity=-0.027 Sum_probs=80.6
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CC--eEEEEccCCCCcc-cccCCCcEeE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TN--VIPIIEDARHPAK-YRMLVGMVDV 216 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~n--I~~~~~D~~~~~~-~~~~~~~fD~ 216 (305)
+++.+|||++||+|.+++++|........|++||+++.+++.+.++++.+ .+ +++++.|+..... . ....||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--WGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC--CSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh--hCCCCcE
Confidence 46889999999999999999997533368999999998888888887765 34 9999999876543 2 2458999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|++|+.... ..++. .+.+.|+++|.|+++.
T Consensus 129 V~lDP~g~~-~~~l~-~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDPFGTP-VPFIE-SVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECCSSCC-HHHHH-HHHHHEEEEEEEEEEE
T ss_pred EEECCCcCH-HHHHH-HHHHHhCCCCEEEEEe
Confidence 999995321 23555 7888999999777764
No 251
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.04 E-value=9.8e-11 Score=102.73 Aligned_cols=112 Identities=20% Similarity=0.183 Sum_probs=77.9
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhh--hCC-CcEEEEEeC--ChHHHHHHHHHHHcCCCe---
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDI--VGP-NGVVYAVEF--SHRSGRDLVNMAKKRTNV--- 194 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~--~~~-~~~V~avD~--s~~~~~~l~~~a~~~~nI--- 194 (305)
.|+|..+..|++.-++..++|+.+||||||++|.++..+++. ++. .+.|+++|+ .| +.....++
T Consensus 53 ~yRSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P--------~~~~~~Gv~~i 124 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEP--------MLMQSYGWNIV 124 (269)
T ss_dssp CCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCC--------CCCCSTTGGGE
T ss_pred CcccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCC--------CcccCCCceEE
Confidence 357888888877666667899999999999999999999998 432 345566662 22 11100233
Q ss_pred EEEEc-cCCCCcccccCCCcEeEEEEeCCC------hhHHHH---HHHHHhccCCCCc-EEEEEE
Q 021911 195 IPIIE-DARHPAKYRMLVGMVDVIFSDVAQ------PDQARI---LALNASYFLKAGG-HFVISI 248 (305)
Q Consensus 195 ~~~~~-D~~~~~~~~~~~~~fD~V~~d~~~------~~~~~~---l~~~a~~~LkpGG-~lv~s~ 248 (305)
.+++. |+++.. ..++|+|+||++. .||.+. |. -|.++|+|+| .|++-+
T Consensus 125 ~~~~G~Df~~~~-----~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~-~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 125 TMKSGVDVFYKP-----SEISDTLLCDIGESSPSAEIEEQRTLRILE-MVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp EEECSCCGGGSC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHHTTCCSEEEEEE
T ss_pred EeeccCCccCCC-----CCCCCEEEeCCCCCCCccHHHHHHHHHHHH-HHHHHhhcCCcEEEEEE
Confidence 34446 987643 3589999999972 355544 33 4668999999 898876
No 252
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.04 E-value=3.3e-10 Score=106.32 Aligned_cols=100 Identities=14% Similarity=-0.016 Sum_probs=78.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-----------------CCeEEEEccCCCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-----------------TNVIPIIEDARHPA 205 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-----------------~nI~~~~~D~~~~~ 205 (305)
++.+|||+|||+|..++++|..++ ...|+++|+++.+++.+.++++.+ .++++++.|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 678999999999999999999864 457999999998877777666543 24889999987654
Q ss_pred ccccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 206 KYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 206 ~~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.. ....||+|++|++.. ...++. .+.+.||++|.|+++
T Consensus 126 ~~--~~~~fD~I~lDP~~~-~~~~l~-~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 126 AE--RHRYFHFIDLDPFGS-PMEFLD-TALRSAKRRGILGVT 163 (378)
T ss_dssp HH--STTCEEEEEECCSSC-CHHHHH-HHHHHEEEEEEEEEE
T ss_pred Hh--ccCCCCEEEeCCCCC-HHHHHH-HHHHhcCCCCEEEEE
Confidence 32 135899999998743 245555 788999999977775
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.03 E-value=2.2e-09 Score=100.88 Aligned_cols=120 Identities=15% Similarity=0.005 Sum_probs=87.3
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCC----------------------------------
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGP---------------------------------- 167 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~---------------------------------- 167 (305)
.|....|++.++... ..+++..|||.+||+|++++.+|.+...
T Consensus 176 Apl~e~LAaall~l~---~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~ 252 (384)
T 3ldg_A 176 APIKENMAAAIILLS---NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQAD 252 (384)
T ss_dssp CCCCHHHHHHHHHHT---TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHHHh---CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhh
Confidence 466778888876432 4567899999999999999999876431
Q ss_pred ---CcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEEEeCCC------hhHHHHHHHHHh
Q 021911 168 ---NGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ------PDQARILALNAS 235 (305)
Q Consensus 168 ---~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~------~~~~~~l~~~a~ 235 (305)
...|+++|+|+.+++.+.++++.. .+|++++.|+.+... ...||+|++|+|. ......+...+.
T Consensus 253 ~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~----~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg 328 (384)
T 3ldg_A 253 YDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT----NKINGVLISNPPYGERLLDDKAVDILYNEMG 328 (384)
T ss_dssp TTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC----CCCSCEEEECCCCTTTTSCHHHHHHHHHHHH
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc----cCCcCEEEECCchhhccCCHHHHHHHHHHHH
Confidence 146999999997777766666554 359999999987643 3589999999993 122222222555
Q ss_pred ccCCC--CcEEEEEE
Q 021911 236 YFLKA--GGHFVISI 248 (305)
Q Consensus 236 ~~Lkp--GG~lv~s~ 248 (305)
+.||+ |+.+++.+
T Consensus 329 ~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 329 ETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHTTCTTSEEEEEE
T ss_pred HHHhhCCCcEEEEEE
Confidence 55655 99998887
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.00 E-value=2.1e-09 Score=101.35 Aligned_cols=119 Identities=11% Similarity=-0.037 Sum_probs=85.8
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCC----------------------------------
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGP---------------------------------- 167 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~---------------------------------- 167 (305)
.|....+++.++... ...++..|||++||+|++++.+|.+...
T Consensus 183 Apl~e~lAa~ll~l~---~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~ 259 (393)
T 3k0b_A 183 APIKETMAAALVLLT---SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLAN 259 (393)
T ss_dssp CSCCHHHHHHHHHHS---CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHHHh---CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhc
Confidence 356777888876433 4567899999999999999999876431
Q ss_pred ---CcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEEEeCCC-------hhHHHHHHHHH
Q 021911 168 ---NGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ-------PDQARILALNA 234 (305)
Q Consensus 168 ---~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~-------~~~~~~l~~~a 234 (305)
...|+++|+|+.+++.+.++++.. .+|++++.|+.+... ..+||+|++|+|. .+...++. .+
T Consensus 260 ~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~----~~~fD~Iv~NPPYg~rl~~~~~l~~ly~-~l 334 (393)
T 3k0b_A 260 YDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT----EDEYGVVVANPPYGERLEDEEAVRQLYR-EM 334 (393)
T ss_dssp TTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC----CCCSCEEEECCCCCCSHHHHHHHHHHHH-HH
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC----CCCCCEEEECCCCccccCCchhHHHHHH-HH
Confidence 146999999997777666666544 369999999987643 3589999999993 12222222 44
Q ss_pred hccCCC--CcEEEEEE
Q 021911 235 SYFLKA--GGHFVISI 248 (305)
Q Consensus 235 ~~~Lkp--GG~lv~s~ 248 (305)
.+.||+ ++.+++.+
T Consensus 335 g~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 335 GIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHTCTTCEEEEEE
T ss_pred HHHHhcCCCCEEEEEE
Confidence 455554 88888887
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.00 E-value=1e-09 Score=103.25 Aligned_cols=120 Identities=17% Similarity=0.101 Sum_probs=85.7
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhC-----------------------------------
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVG----------------------------------- 166 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~----------------------------------- 166 (305)
.|....+++.++... ...++..|||++||+|++++.+|.+..
T Consensus 177 Apl~e~lAa~ll~~~---~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~ 253 (385)
T 3ldu_A 177 APIRETLAAGLIYLT---PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKID 253 (385)
T ss_dssp CCCCHHHHHHHHHTS---CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSC
T ss_pred CCCcHHHHHHHHHhh---CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhh
Confidence 356677888876533 456789999999999999999987642
Q ss_pred --CCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh------hHHHHHHHHHh
Q 021911 167 --PNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP------DQARILALNAS 235 (305)
Q Consensus 167 --~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~------~~~~~l~~~a~ 235 (305)
....|+++|+|+.+++.+.+++... .+|++++.|+.+... ..+||+|++|+|.- .....+...+.
T Consensus 254 ~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~----~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg 329 (385)
T 3ldu_A 254 NESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS----EDEFGFIITNPPYGERLEDKDSVKQLYKELG 329 (385)
T ss_dssp CSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC----SCBSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc----CCCCcEEEECCCCcCccCCHHHHHHHHHHHH
Confidence 1247999999997766666555443 379999999987643 35899999999931 12222222555
Q ss_pred ccCCC--CcEEEEEE
Q 021911 236 YFLKA--GGHFVISI 248 (305)
Q Consensus 236 ~~Lkp--GG~lv~s~ 248 (305)
+.||+ ++.+++.+
T Consensus 330 ~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 330 YAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHTSBSCEEEEEE
T ss_pred HHHhhCCCCEEEEEE
Confidence 56665 88888877
No 256
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.00 E-value=1.1e-08 Score=94.86 Aligned_cols=145 Identities=15% Similarity=0.072 Sum_probs=88.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.++++++||||||+||.+|..+++. .+.|+|||+.+ |...+...++|++++.|+....+. ...||+|+|
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-----l~~~l~~~~~V~~~~~d~~~~~~~---~~~~D~vvs 276 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-----MAQSLMDTGQVTWLREDGFKFRPT---RSNISWMVC 276 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-----CCHHHHTTTCEEEECSCTTTCCCC---SSCEEEEEE
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-----cChhhccCCCeEEEeCccccccCC---CCCcCEEEE
Confidence 4688999999999999999999987 36999999875 223344558999999998776532 368999999
Q ss_pred eCCCh-hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhh---HHHHHHHHHHCCCcEeEE-eecCCCCCceEEEE
Q 021911 220 DVAQP-DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAV---FQSEVKKLQQDQFKPFEQ-VTLEPFERDHACVV 294 (305)
Q Consensus 220 d~~~~-~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v---~~~~~~~l~~~Gf~~~e~-~~l~p~~~~~~~vv 294 (305)
|+..+ .....+.......+... .+++..+... ......+ .....+.++..+|...-+ .++ -+.+....|.
T Consensus 277 Dm~~~p~~~~~l~~~wl~~~~~~-~aI~~lKL~m---k~~~~~l~~~~~~i~~~l~~~g~~~~l~akhL-~hdReEiTV~ 351 (375)
T 4auk_A 277 DMVEKPAKVAALMAQWLVNGWCR-ETIFNLKLPM---KKRYEEVSHNLAYIQAQLDEHGINAQIQARQL-YHDREEVTVH 351 (375)
T ss_dssp CCSSCHHHHHHHHHHHHHTTSCS-EEEEEEECCS---SSHHHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTCSSEEEEE
T ss_pred cCCCChHHhHHHHHHHHhccccc-eEEEEEEecc---cchHHHHHHHHHHHHHHHHhcCcchhheehhh-ccCCcEEEEE
Confidence 99853 33222221333333333 3445443211 1111111 122235567788875322 233 2346666666
Q ss_pred EEEcCC
Q 021911 295 GGYRMP 300 (305)
Q Consensus 295 ~~~~~~ 300 (305)
..+..+
T Consensus 352 ~rk~~a 357 (375)
T 4auk_A 352 VRRIWA 357 (375)
T ss_dssp EEECCC
T ss_pred EEechh
Confidence 665444
No 257
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.97 E-value=3.2e-09 Score=96.45 Aligned_cols=83 Identities=16% Similarity=0.169 Sum_probs=61.8
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++. ..+|++||+|+.++..+.+.++.. +++++++.|+...+ ..+||+|
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-----~~~~D~V 110 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-----FPKFDVC 110 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC-----CCCCSEE
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC-----cccCCEE
Confidence 4678899999999999999999987 258999999997766666555432 68999999997754 2489999
Q ss_pred EEeCCChhHHHHH
Q 021911 218 FSDVAQPDQARIL 230 (305)
Q Consensus 218 ~~d~~~~~~~~~l 230 (305)
++|+|......++
T Consensus 111 v~n~py~~~~~~~ 123 (299)
T 2h1r_A 111 TANIPYKISSPLI 123 (299)
T ss_dssp EEECCGGGHHHHH
T ss_pred EEcCCcccccHHH
Confidence 9999965444444
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=8.9e-09 Score=91.48 Aligned_cols=88 Identities=10% Similarity=0.023 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-CCcEeEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-VGMVDVIF 218 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-~~~fD~V~ 218 (305)
.+.++.+|||+|||+|.+|..+++.. .+|++||+|+.++..+.+.+...++++++++|+.+.+..... ..+|| |+
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv 101 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VV 101 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EE
T ss_pred CCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EE
Confidence 57788999999999999999999873 589999999966665555554447899999999887533211 35788 99
Q ss_pred EeCCChhHHHHHH
Q 021911 219 SDVAQPDQARILA 231 (305)
Q Consensus 219 ~d~~~~~~~~~l~ 231 (305)
+|+|......++.
T Consensus 102 ~NlPY~is~~il~ 114 (255)
T 3tqs_A 102 GNLPYNISTPLLF 114 (255)
T ss_dssp EECCHHHHHHHHH
T ss_pred ecCCcccCHHHHH
Confidence 9999655555555
No 259
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.97 E-value=5.1e-09 Score=93.73 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=71.9
Q ss_pred CCEEEEEecCC--CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC------CCeEEEEccCCCCccc---ccCCC
Q 021911 144 GARVLYLGAAS--GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR------TNVIPIIEDARHPAKY---RMLVG 212 (305)
Q Consensus 144 g~~VLDlG~G~--G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~------~nI~~~~~D~~~~~~~---~~~~~ 212 (305)
-.+|||||||+ +..+..++..+.+..+|++||.|+ .|++.++.+ .++.++++|++++... .....
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp----~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDP----IVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCH----HHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCCh----HHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccc
Confidence 37999999997 456777777766888999999999 555554432 3699999999886321 00012
Q ss_pred cEe-----EEEEeCC---Chh---HHHHHHHHHhccCCCCcEEEEEEc
Q 021911 213 MVD-----VIFSDVA---QPD---QARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 213 ~fD-----~V~~d~~---~~~---~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
.|| +|+++.. .++ +..++. ++.+.|+|||+|++++.
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~-~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVR-RLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHH-HHHTTSCTTCEEEEEEE
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHH-HHHHhCCCCcEEEEEec
Confidence 333 4666555 223 456776 99999999999999984
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.95 E-value=8e-09 Score=93.67 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=73.4
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK 206 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~ 206 (305)
.++..++..+ .+.++.+|||+|||+|.++..+++.. .+|++||+|+..+..+.+.+...+|++++++|+.+.+.
T Consensus 37 ~i~~~Iv~~l---~~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 37 NFVNKAVESA---NLTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCG
T ss_pred HHHHHHHHhc---CCCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCc
Confidence 3444554333 57788999999999999999999982 58999999997666666655545799999999987643
Q ss_pred cccCCCcEeEEEEeCCChhHHHHHH
Q 021911 207 YRMLVGMVDVIFSDVAQPDQARILA 231 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~~~~~~~~l~ 231 (305)
. ...||+|++|+|......++.
T Consensus 111 ~---~~~fD~Iv~NlPy~is~pil~ 132 (295)
T 3gru_A 111 N---KLDFNKVVANLPYQISSPITF 132 (295)
T ss_dssp G---GSCCSEEEEECCGGGHHHHHH
T ss_pred c---cCCccEEEEeCcccccHHHHH
Confidence 2 247999999999665555555
No 261
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.94 E-value=2.6e-10 Score=101.55 Aligned_cols=116 Identities=20% Similarity=0.195 Sum_probs=81.5
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc----CCCeEEEEc
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK----RTNVIPIIE 199 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~----~~nI~~~~~ 199 (305)
|+|..+..|++..++..++++.+|||||||+|.++..+++.. +...|+++|++. ++...+.. ..++..+..
T Consensus 71 YrSRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~----d~~~~pi~~~~~g~~ii~~~~ 145 (282)
T 3gcz_A 71 AVSRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGV----QGHEKPIMRTTLGWNLIRFKD 145 (282)
T ss_dssp CSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC----TTSCCCCCCCBTTGGGEEEEC
T ss_pred EecHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEecc----CccccccccccCCCceEEeeC
Confidence 478888888887777788999999999999999999999764 445799999986 22111111 124554544
Q ss_pred cCCCCcccccCCCcEeEEEEeCCCh------hHHH---HHHHHHhccCCCC--cEEEEEE
Q 021911 200 DARHPAKYRMLVGMVDVIFSDVAQP------DQAR---ILALNASYFLKAG--GHFVISI 248 (305)
Q Consensus 200 D~~~~~~~~~~~~~fD~V~~d~~~~------~~~~---~l~~~a~~~LkpG--G~lv~s~ 248 (305)
++... .+...++|+|+||++.. |+.+ +|. -|.++|||| |.|++-+
T Consensus 146 ~~dv~---~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~-~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 146 KTDVF---NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLN-CAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp SCCGG---GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHHHHHCCCEEEEEE
T ss_pred Ccchh---hcCCCCcCEEEecCccCCCChHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEE
Confidence 33211 12357899999999832 4333 333 678899999 9999987
No 262
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.92 E-value=3e-09 Score=101.80 Aligned_cols=106 Identities=16% Similarity=0.116 Sum_probs=77.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhC------------CCcEEEEEeCChHHHHHHHHHHHcC--C--CeEEEEccCCC
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVG------------PNGVVYAVEFSHRSGRDLVNMAKKR--T--NVIPIIEDARH 203 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~------------~~~~V~avD~s~~~~~~l~~~a~~~--~--nI~~~~~D~~~ 203 (305)
.+.++.+|||+|||+|.++..+++.+. ...+++++|+++.+++-+...+... . ++.+++.|+..
T Consensus 168 ~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 168 NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLE 247 (445)
T ss_dssp CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTT
T ss_pred CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCC
Confidence 466788999999999999999988652 1247999999995544433332222 2 67788999876
Q ss_pred CcccccCCCcEeEEEEeCCCh--------------------hHHHHHHHHHhccCCCCcEEEEEEcc
Q 021911 204 PAKYRMLVGMVDVIFSDVAQP--------------------DQARILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 204 ~~~~~~~~~~fD~V~~d~~~~--------------------~~~~~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
.+. ...||+|++|+|.. .+...+. ++.++|||+|++++.++.
T Consensus 248 ~~~----~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~-~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 248 KEP----STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQ-HMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SCC----SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHH-HHHHHEEEEEEEEEEEEH
T ss_pred Ccc----cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHH-HHHHHhccCCEEEEEECC
Confidence 542 24899999999821 1234555 899999999999999843
No 263
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.86 E-value=1.5e-08 Score=87.59 Aligned_cols=116 Identities=17% Similarity=0.134 Sum_probs=81.9
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEc-c
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIE-D 200 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~-D 200 (305)
|+|.-+..|....++..++++.+||||||++|.++..++...+. ..|+|+|+-..-. +.-.+.+.. ..|+|++. |
T Consensus 59 yrSRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~gh-e~P~~~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 59 AVSRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGH-EEPVPMSTYGWNIVKLMSGKD 136 (267)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTS-CCCCCCCCTTTTSEEEECSCC
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCc-cCcchhhhcCcCceEEEeccc
Confidence 47788888877777778899999999999999999999988653 3899999975110 000000111 56889988 8
Q ss_pred CCCCcccccCCCcEeEEEEeCCC------hhHHH---HHHHHHhccCCCCcEEEEEE
Q 021911 201 ARHPAKYRMLVGMVDVIFSDVAQ------PDQAR---ILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 201 ~~~~~~~~~~~~~fD~V~~d~~~------~~~~~---~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.... ..++|+|+||+.. .++.+ +|. -+.++|++ +.|++-+
T Consensus 137 v~~~~-----~~~~DtllcDIgeSs~~~~vE~~RtlrvLe-la~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 137 VFYLP-----PEKCDTLLCDIGESSPSPTVEESRTIRVLK-MVEPWLKN-NQFCIKV 186 (267)
T ss_dssp GGGCC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHGGGCSS-CEEEEEE
T ss_pred eeecC-----CccccEEEEecCCCCCChhhhhhHHHHHHH-HHHHhccc-CCEEEEE
Confidence 75443 3579999999972 13433 333 56789999 6777755
No 264
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.84 E-value=4.1e-08 Score=86.45 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=73.2
Q ss_pred HHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc
Q 021911 127 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK 206 (305)
Q Consensus 127 ~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~ 206 (305)
.+...++..+ .+.++.+|||+|||+|.++..+++.. .+|++||+|+.++..+.+..+..+++++++.|+.+.+.
T Consensus 17 ~~~~~i~~~~---~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 17 HNIDKIMTNI---RLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKF 90 (244)
T ss_dssp HHHHHHHTTC---CCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCC
T ss_pred HHHHHHHHhC---CCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCc
Confidence 4555665433 46778999999999999999999984 58999999996655555444433689999999977642
Q ss_pred cccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCC
Q 021911 207 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 241 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpG 241 (305)
. ....| .|++|+|......++. ++.......
T Consensus 91 ~--~~~~~-~vv~nlPy~~~~~~l~-~~l~~~~~~ 121 (244)
T 1qam_A 91 P--KNQSY-KIFGNIPYNISTDIIR-KIVFDSIAD 121 (244)
T ss_dssp C--SSCCC-EEEEECCGGGHHHHHH-HHHHSCCCS
T ss_pred c--cCCCe-EEEEeCCcccCHHHHH-HHHhcCCCC
Confidence 1 11345 6889999665555555 444333333
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.83 E-value=9.9e-09 Score=100.59 Aligned_cols=108 Identities=9% Similarity=0.024 Sum_probs=76.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCC-----------------CcEEEEEeCChHHHHHHHHHHHcC--CC-----eE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGP-----------------NGVVYAVEFSHRSGRDLVNMAKKR--TN-----VI 195 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~-----------------~~~V~avD~s~~~~~~l~~~a~~~--~n-----I~ 195 (305)
.+.++.+|||.|||+|.++..+++.+.. ..+++++|+++.+++-+...+... .+ +.
T Consensus 166 ~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~ 245 (541)
T 2ar0_A 166 KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGA 245 (541)
T ss_dssp CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBS
T ss_pred ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCC
Confidence 4677899999999999999999876532 137999999995544333222222 33 67
Q ss_pred EEEccCCCCcccccCCCcEeEEEEeCCCh----------------h-HHHHHHHHHhccCCCCcEEEEEEcc
Q 021911 196 PIIEDARHPAKYRMLVGMVDVIFSDVAQP----------------D-QARILALNASYFLKAGGHFVISIKA 250 (305)
Q Consensus 196 ~~~~D~~~~~~~~~~~~~fD~V~~d~~~~----------------~-~~~~l~~~a~~~LkpGG~lv~s~~~ 250 (305)
+++.|....+.. ....||+|++|+|.. + +...+. ++.++|||+|++++.++.
T Consensus 246 I~~gDtL~~~~~--~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~-~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 246 IRLGNTLGSDGE--NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQ-HIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp EEESCTTSHHHH--TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHH-HHHHHEEEEEEEEEEEEH
T ss_pred eEeCCCcccccc--cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHH-HHHHHhCCCCEEEEEecC
Confidence 888898654322 236899999999921 1 234444 899999999999999843
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.82 E-value=1.4e-07 Score=85.17 Aligned_cols=146 Identities=16% Similarity=0.125 Sum_probs=99.4
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH-------cCCCeEEEEccCCCCcccccCCCcEeE
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK-------KRTNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~-------~~~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
..+||-||.|.|..+..+++.. +-.+|+.||+++..++-+.+... ..+++++++.|+...... ...+||+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~--~~~~yDv 160 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTFDV 160 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC--SSCCEEE
T ss_pred CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh--ccccCCE
Confidence 4899999999999999999874 34589999999955443333321 227899999999887543 3579999
Q ss_pred EEEeCCCh-------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe--ecCCCC
Q 021911 217 IFSDVAQP-------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV--TLEPFE 287 (305)
Q Consensus 217 V~~d~~~~-------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~--~l~p~~ 287 (305)
|++|.+.| -..+.+. .+++.|+|+|.|+... .+.... ...+....+.+++. |...... .+..|.
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~-~~~~~L~p~Gv~v~q~--~sp~~~---~~~~~~~~~~l~~~-F~~v~~~~~~vPty~ 233 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYE-GCKRCLNPGGIFVAQN--GVCFLQ---QEEAIDSHRKLSHY-FSDVGFYQAAIPTYY 233 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHH-HHHHTEEEEEEEEEEE--EESSSC---CHHHHHHHHHHHHH-CSEEEEEEECCTTSS
T ss_pred EEEeCCCcCCCchhhcCHHHHH-HHHHHhCCCCEEEEec--CCcccC---hHHHHHHHHHHHhh-CCceeeeeeeeccCC
Confidence 99998743 1345555 8899999999999875 222221 12334445666655 6665543 344453
Q ss_pred -CceEEEEEEEcC
Q 021911 288 -RDHACVVGGYRM 299 (305)
Q Consensus 288 -~~~~~vv~~~~~ 299 (305)
..+.++++.+..
T Consensus 234 ~g~w~f~~as~~~ 246 (294)
T 3o4f_A 234 GGIMTFAWATDND 246 (294)
T ss_dssp SSCEEEEEEESCT
T ss_pred CcceeheeEECCC
Confidence 456677777653
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.79 E-value=6.4e-08 Score=87.02 Aligned_cols=90 Identities=16% Similarity=0.043 Sum_probs=66.9
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCC-C--cEe
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-G--MVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~-~--~fD 215 (305)
.+.++.+|||+|||+|.++..|++.... .++|++||+|+.++..+.+.. ..++++++.|+.+.+...... . ..+
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~~v~~i~~D~~~~~~~~~~~~~~~~~~ 116 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GELLELHAGDALTFDFGSIARPGDEPSL 116 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GGGEEEEESCGGGCCGGGGSCSSSSCCE
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CCCcEEEECChhcCChhHhcccccCCce
Confidence 5678899999999999999999998643 245999999995555444442 368999999998765332211 1 346
Q ss_pred EEEEeCCChhHHHHHH
Q 021911 216 VIFSDVAQPDQARILA 231 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~ 231 (305)
.|++|+|......++.
T Consensus 117 ~vv~NlPY~iss~il~ 132 (279)
T 3uzu_A 117 RIIGNLPYNISSPLLF 132 (279)
T ss_dssp EEEEECCHHHHHHHHH
T ss_pred EEEEccCccccHHHHH
Confidence 8999999776666666
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.78 E-value=2.8e-08 Score=100.25 Aligned_cols=122 Identities=16% Similarity=0.143 Sum_probs=85.5
Q ss_pred CchhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhC-----------------------------------
Q 021911 122 NPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVG----------------------------------- 166 (305)
Q Consensus 122 ~~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~----------------------------------- 166 (305)
.|....|++.++... ..+++..|||.+||+|++++.+|.+..
T Consensus 172 apl~e~LAa~ll~~~---~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~ 248 (703)
T 3v97_A 172 APIKETLAAAIVMRS---GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 248 (703)
T ss_dssp CSSCHHHHHHHHHHT---TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhh---CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHh
Confidence 356778888876533 356788999999999999999887631
Q ss_pred ------CCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEEEEeCCC-------hhH---H
Q 021911 167 ------PNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ-------PDQ---A 227 (305)
Q Consensus 167 ------~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~-------~~~---~ 227 (305)
+...|+++|+++.+++.+..+++.. ..|.+.+.|+.+.... ...+.||+|++|+|. .+. .
T Consensus 249 ~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~-~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly 327 (703)
T 3v97_A 249 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-LPKGPYGTVLSNPPYGERLDSEPALIALH 327 (703)
T ss_dssp HHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS-CTTCCCCEEEECCCCCC---CCHHHHHHH
T ss_pred hhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc-cccCCCCEEEeCCCccccccchhHHHHHH
Confidence 1257999999997766666665544 3489999999775321 112389999999992 121 2
Q ss_pred HHHHHHHhccCCCCcEEEEEE
Q 021911 228 RILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 228 ~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.+. .+.+.+.||+.+++.+
T Consensus 328 ~~l~-~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 328 SLLG-RIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHH-HHHHHHCTTCEEEEEE
T ss_pred HHHH-HHHHhhCCCCeEEEEe
Confidence 2233 3445566899999876
No 269
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.77 E-value=4e-10 Score=99.30 Aligned_cols=99 Identities=15% Similarity=0.121 Sum_probs=70.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccCCCcEe
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.+.++.+|||+|||+|.++..+++.. .+|+++|+|+ .+++.++++ +++++++.|+.+.+.. ...+|
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~----~~~~~a~~~~~~~~~v~~~~~D~~~~~~~--~~~~f- 95 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDS----HLFNLSSEKLKLNTRVTLIHQDILQFQFP--NKQRY- 95 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSC----SSSSSSSCTTTTCSEEEECCSCCTTTTCC--CSSEE-
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCH----HHHHHHHHHhccCCceEEEECChhhcCcc--cCCCc-
Confidence 46788999999999999999999983 5899999999 555555443 5799999999876421 12578
Q ss_pred EEEEeCCChh----HHHHHH-------------HHHhccCCCCcEEEEEE
Q 021911 216 VIFSDVAQPD----QARILA-------------LNASYFLKAGGHFVISI 248 (305)
Q Consensus 216 ~V~~d~~~~~----~~~~l~-------------~~a~~~LkpGG~lv~s~ 248 (305)
.|++|+|... ...++. ..+.++|||+|.|++.+
T Consensus 96 ~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 96 KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8899988322 112221 24667777777766554
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.77 E-value=1.6e-08 Score=91.90 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=65.5
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccc-cc-CCCcEeE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKY-RM-LVGMVDV 216 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~-~~-~~~~fD~ 216 (305)
.++++.+|||+|||+|..+..+++.+. .++|++||+|+.++..+.+.++.. .++.+++.|+.+.+.. .. ...+||.
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDG 101 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCE
Confidence 477899999999999999999999863 679999999996666555555443 5899999998776421 10 1258999
Q ss_pred EEEeCCCh
Q 021911 217 IFSDVAQP 224 (305)
Q Consensus 217 V~~d~~~~ 224 (305)
|++|++..
T Consensus 102 Vl~D~gvS 109 (301)
T 1m6y_A 102 ILMDLGVS 109 (301)
T ss_dssp EEEECSCC
T ss_pred EEEcCccc
Confidence 99999854
No 271
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.76 E-value=4.7e-08 Score=86.49 Aligned_cols=131 Identities=8% Similarity=-0.051 Sum_probs=84.9
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.+..+|||||||+|-++..++... +..+|+++|+++++++-+.+++... .+..+.+.|..... +...||+|++.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~----p~~~~DvaL~l 205 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR----LDEPADVTLLL 205 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC----CCSCCSEEEET
T ss_pred CCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC----CCCCcchHHHH
Confidence 446799999999999999998864 6789999999996665555555443 56788888886654 35789999997
Q ss_pred CCCh---hHH-HHHHHHHhccCCCCcEEEEEEcccccCCC-CchhhhHHHH-HHHHHHCCCcEeE
Q 021911 221 VAQP---DQA-RILALNASYFLKAGGHFVISIKANCIDST-VPAEAVFQSE-VKKLQQDQFKPFE 279 (305)
Q Consensus 221 ~~~~---~~~-~~l~~~a~~~LkpGG~lv~s~~~~~i~~~-~~~~~v~~~~-~~~l~~~Gf~~~e 279 (305)
...+ +|. .... ++.+.|+|++.+|-.- ..++... .-.+.-.... .+.+.+.|+.+.+
T Consensus 206 kti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp-~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 206 KTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP-TKSLGQRSKGMFQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp TCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE-CC-------CHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc-chhhcCCCcchhhHHHHHHHHHHHhcCCceee
Confidence 7733 222 2344 7888999996655432 2232222 2222222222 3445667885544
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.76 E-value=6.7e-08 Score=85.44 Aligned_cols=84 Identities=19% Similarity=0.237 Sum_probs=64.7
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.+.++.+|||+|||+|.++..+++. +..+|++||+|+ .+++.++++ .+++++++|+...+... ....+ +|
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~----~~~~~~~~~~~~~v~~i~~D~~~~~~~~-~~~~~-~v 99 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDR----EMVENLKSIGDERLEVINEDASKFPFCS-LGKEL-KV 99 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCH----HHHHHHTTSCCTTEEEECSCTTTCCGGG-SCSSE-EE
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCH----HHHHHHHhccCCCeEEEEcchhhCChhH-ccCCc-EE
Confidence 4678899999999999999999987 346999999999 555555543 68999999998775332 11244 89
Q ss_pred EEeCCChhHHHHHH
Q 021911 218 FSDVAQPDQARILA 231 (305)
Q Consensus 218 ~~d~~~~~~~~~l~ 231 (305)
++|+|......++.
T Consensus 100 v~NlPy~i~~~il~ 113 (249)
T 3ftd_A 100 VGNLPYNVASLIIE 113 (249)
T ss_dssp EEECCTTTHHHHHH
T ss_pred EEECchhccHHHHH
Confidence 99999766666665
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.74 E-value=2.8e-07 Score=90.19 Aligned_cols=139 Identities=14% Similarity=0.028 Sum_probs=88.8
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhC--CCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccCCCcE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVG--PNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~--~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
+.++.+|||.|||+|++...+++.+. ...+++++|+++.+..-+..++... .++.+++.|....+........|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 45788999999999999999998863 2468999999995543332222111 35788899986552111124689
Q ss_pred eEEEEeCCCh-----------h---------------HHHHHHHHHhccCC-CCcEEEEEEcccccCCCCchhhhHHHHH
Q 021911 215 DVIFSDVAQP-----------D---------------QARILALNASYFLK-AGGHFVISIKANCIDSTVPAEAVFQSEV 267 (305)
Q Consensus 215 D~V~~d~~~~-----------~---------------~~~~l~~~a~~~Lk-pGG~lv~s~~~~~i~~~~~~~~v~~~~~ 267 (305)
|+|++|||.. + ... +..++.++|| |+|++.+.++...+... .. .....
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~-Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~-~~---~~~iR 373 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFA-FLLHGYYHLKQDNGVMAIVLPHGVLFRG-NA---EGTIR 373 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHH-HHHHHHHTBCTTTCEEEEEEETHHHHCC-TH---HHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHH-HHHHHHHHhCCCceeEEEEecchHhhCC-ch---hHHHH
Confidence 9999999920 0 122 3448999999 99999999854333221 11 12224
Q ss_pred HHHHHCCCcEeEEeecCC
Q 021911 268 KKLQQDQFKPFEQVTLEP 285 (305)
Q Consensus 268 ~~l~~~Gf~~~e~~~l~p 285 (305)
++|.+. +.+..++.+.+
T Consensus 374 k~Lle~-~~l~~II~LP~ 390 (542)
T 3lkd_A 374 KALLEE-GAIDTVIGLPA 390 (542)
T ss_dssp HHHHHT-TCEEEEEECCS
T ss_pred HHHHhC-CceeEEEEccc
Confidence 555444 44555665543
No 274
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.73 E-value=1.4e-07 Score=87.82 Aligned_cols=144 Identities=20% Similarity=0.244 Sum_probs=95.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--------------CCeEEEEccCCCCccc-
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--------------TNVIPIIEDARHPAKY- 207 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--------------~nI~~~~~D~~~~~~~- 207 (305)
+..+||-||.|.|..+..+++. +..+|+.||+++ .+++.+++. +++++++.|+......
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh--~~~~V~~VEIDp----~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQ----MVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCH----HHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc--CCceeEEEccCH----HHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh
Confidence 4589999999999999999986 346899999999 444444431 4588999998765421
Q ss_pred ccCCCcEeEEEEeCCC------h------h-HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCC
Q 021911 208 RMLVGMVDVIFSDVAQ------P------D-QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQ 274 (305)
Q Consensus 208 ~~~~~~fD~V~~d~~~------~------~-~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~G 274 (305)
.....+||+||+|.+. | . ..+.+. .+++.|+|+|.|+... .|... ...+....+.|++.
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~-~~~~~L~p~GVlv~Q~--~s~~~----~~~~~~i~~tl~~v- 350 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILD-LSMKVLKQDGKYFTQG--NCVNL----TEALSLYEEQLGRL- 350 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHH-HHHHTEEEEEEEEEEE--EETTC----HHHHHHHHHHHTTS-
T ss_pred hhccCceeEEEECCCCCcccCcccCcchHHHHHHHHH-HHHHhcCCCCEEEEec--CCCcc----hhHHHHHHHHHHHh-
Confidence 1123589999999642 1 1 234454 7899999999998764 33221 12333444556554
Q ss_pred CcEeEE----eecCCCCCceEEEEEEEcCC
Q 021911 275 FKPFEQ----VTLEPFERDHACVVGGYRMP 300 (305)
Q Consensus 275 f~~~e~----~~l~p~~~~~~~vv~~~~~~ 300 (305)
|..... ..+..|...+.++++.++..
T Consensus 351 F~~v~~~~~~~~VPSy~~~W~F~~aSK~~~ 380 (381)
T 3c6k_A 351 YCPVEFSKEIVCVPSYLELWVFYTVWKKAK 380 (381)
T ss_dssp SSCEEEEEEEECCGGGSSCEEEEEEEECCC
T ss_pred CCcceEeeEEEEecCCCCceeeeEEECCCC
Confidence 443322 34555767788888887643
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.71 E-value=2.4e-07 Score=93.34 Aligned_cols=138 Identities=10% Similarity=-0.080 Sum_probs=83.7
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhC--CCcEEEEEeCChHHHHHH--HHHHHcC------CCeEEEEccCCCCcccccCC
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVG--PNGVVYAVEFSHRSGRDL--VNMAKKR------TNVIPIIEDARHPAKYRMLV 211 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~--~~~~V~avD~s~~~~~~l--~~~a~~~------~nI~~~~~D~~~~~~~~~~~ 211 (305)
.++.+|||.|||+|.+...+++.+. ...+++++|+++.++.-+ ...+..+ .++.+...|+..+... ..
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~--~~ 397 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE--DF 397 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG--GG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc--cc
Confidence 4678999999999999999998763 135799999999554333 1111110 2234445555543211 24
Q ss_pred CcEeEEEEeCCCh-------h------------------------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchh
Q 021911 212 GMVDVIFSDVAQP-------D------------------------QARILALNASYFLKAGGHFVISIKANCIDSTVPAE 260 (305)
Q Consensus 212 ~~fD~V~~d~~~~-------~------------------------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~ 260 (305)
..||+|++|||.- . ....+..++.++|+|+|++++.++...+.....
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~-- 475 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGN-- 475 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSH--
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCCh--
Confidence 6899999999930 0 122334478899999999999985322211110
Q ss_pred hhHHHHHHHHHHCCCcEeEEeecCC
Q 021911 261 AVFQSEVKKLQQDQFKPFEQVTLEP 285 (305)
Q Consensus 261 ~v~~~~~~~l~~~Gf~~~e~~~l~p 285 (305)
......++|.+ .+.+..++.+..
T Consensus 476 -~~kkLRk~LLe-~~~I~aIIdLP~ 498 (878)
T 3s1s_A 476 -ESKAFREFLVG-NFGLEHIFLYPR 498 (878)
T ss_dssp -HHHHHHHHHTT-TTCEEEEEECCB
T ss_pred -HHHHHHHHHHh-CCCeEEEEECCC
Confidence 11222344433 366667776654
No 276
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.69 E-value=2.9e-07 Score=80.57 Aligned_cols=132 Identities=11% Similarity=0.080 Sum_probs=79.9
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.+..+|||||||+|-++..++ +...|+++|+|+.++.-+.+.+... .+..+.++|....+ +..+||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~----~~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP----PAEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC----CCCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC----CCCCcchHHHH
Confidence 456899999999998888777 5679999999996665555554443 67788899987654 24699999987
Q ss_pred CCCh---hHH-HHHHHHHhccCCCCcEEEEEEcccccCCCC-chhhhHHHHHHHHHHCCCcEeEEeec
Q 021911 221 VAQP---DQA-RILALNASYFLKAGGHFVISIKANCIDSTV-PAEAVFQSEVKKLQQDQFKPFEQVTL 283 (305)
Q Consensus 221 ~~~~---~~~-~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~-~~~~v~~~~~~~l~~~Gf~~~e~~~l 283 (305)
...+ +|. .... ++.+.|+++ .++++.+..++.... -.+.-.....+..-...+.+++.+.+
T Consensus 176 k~lh~LE~q~~~~~~-~ll~aL~~~-~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~ 241 (253)
T 3frh_A 176 KLLPLLEREQAGSAM-ALLQSLNTP-RMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTI 241 (253)
T ss_dssp SCHHHHHHHSTTHHH-HHHHHCBCS-EEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEE
T ss_pred HHHHHhhhhchhhHH-HHHHHhcCC-CEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheec
Confidence 6522 222 2333 677799998 455555433332222 11222222222222344666665544
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.68 E-value=4.4e-08 Score=87.03 Aligned_cols=144 Identities=16% Similarity=0.127 Sum_probs=91.3
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhh------CCC-----cEEEEEeCCh---HHHHHH----------H-HHHHc-----
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIV------GPN-----GVVYAVEFSH---RSGRDL----------V-NMAKK----- 190 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~------~~~-----~~V~avD~s~---~~~~~l----------~-~~a~~----- 190 (305)
.++..+|||+|+|+|..+..+++.+ .|. ..++++|..+ ..+..+ . +..+.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999999888765 553 4899999876 222211 1 11111
Q ss_pred -----------CCCeEEEEccCCCCcccc--cCCCcEeEEEEeCC----Chh--HHHHHHHHHhccCCCCcEEEEEEccc
Q 021911 191 -----------RTNVIPIIEDARHPAKYR--MLVGMVDVIFSDVA----QPD--QARILALNASYFLKAGGHFVISIKAN 251 (305)
Q Consensus 191 -----------~~nI~~~~~D~~~~~~~~--~~~~~fD~V~~d~~----~~~--~~~~l~~~a~~~LkpGG~lv~s~~~~ 251 (305)
+.+|.++..|+.+..+.. .....||+|+.|+. +|+ +.+++. .+.++|||||+|+..+
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~-~l~~~L~pGG~l~tys--- 213 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFN-AMARLARPGGTLATFT--- 213 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHH-HHHHHEEEEEEEEESC---
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHH-HHHHHcCCCcEEEEEe---
Confidence 135778889987643221 00137999999974 333 567777 9999999999988543
Q ss_pred ccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCCCCCceEEEEEEEcCCC
Q 021911 252 CIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEPFERDHACVVGGYRMPK 301 (305)
Q Consensus 252 ~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p~~~~~~~vv~~~~~~~ 301 (305)
+ . .. ....|+++||++.+. ..+.+..-++++.+..+.
T Consensus 214 a-----a-~~----vrr~L~~aGF~v~~~---~g~~~kr~m~~a~~~~~~ 250 (257)
T 2qy6_A 214 S-----A-GF----VRRGLQEAGFTMQKR---KGFGRKREMLCGVMEQTE 250 (257)
T ss_dssp C-----B-HH----HHHHHHHHTEEEEEE---CCSTTCCCEEEEEEC---
T ss_pred C-----C-HH----HHHHHHHCCCEEEeC---CCCCCCCceEEEEecCcc
Confidence 1 1 11 235567789987654 334444456777776654
No 278
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.67 E-value=5.8e-08 Score=86.63 Aligned_cols=117 Identities=17% Similarity=0.166 Sum_probs=80.5
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHH--HHHHHHHcCCCeEEEEc-c
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGR--DLVNMAKKRTNVIPIIE-D 200 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~--~l~~~a~~~~nI~~~~~-D 200 (305)
|.|.-+..|....++..++++.+||||||++|.++..++...+. ..|+|+|+-..--. .+.+... ...|.++.. |
T Consensus 75 y~SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~P~~~~ql~-w~lV~~~~~~D 152 (321)
T 3lkz_A 75 PVSRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEEPQLVQSYG-WNIVTMKSGVD 152 (321)
T ss_dssp CSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCCCCCCCBTT-GGGEEEECSCC
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccCcchhhhcC-CcceEEEeccC
Confidence 36777777777777778899999999999999999999988653 37999999751000 0000000 024667766 8
Q ss_pred CCCCcccccCCCcEeEEEEeCCC------hhHHH---HHHHHHhccCCCC-cEEEEEE
Q 021911 201 ARHPAKYRMLVGMVDVIFSDVAQ------PDQAR---ILALNASYFLKAG-GHFVISI 248 (305)
Q Consensus 201 ~~~~~~~~~~~~~fD~V~~d~~~------~~~~~---~l~~~a~~~LkpG-G~lv~s~ 248 (305)
+....+ .++|+|+||+.. .++.+ +|. -+.++|+++ |.|++-+
T Consensus 153 v~~l~~-----~~~D~ivcDigeSs~~~~ve~~Rtl~vLe-l~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 153 VFYRPS-----ECCDTLLCDIGESSSSAEVEEHRTIRVLE-MVEDWLHRGPREFCVKV 204 (321)
T ss_dssp TTSSCC-----CCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHHTTCCCEEEEEE
T ss_pred HhhCCC-----CCCCEEEEECccCCCChhhhhhHHHHHHH-HHHHHhccCCCcEEEEE
Confidence 766543 579999999982 13433 333 567889988 8888865
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.67 E-value=7e-08 Score=95.64 Aligned_cols=96 Identities=22% Similarity=0.214 Sum_probs=68.2
Q ss_pred CCEEEEEecCCCccHHH---HHhhhCCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 144 GARVLYLGAASGTTVSH---VSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~---la~~~~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
...|||+|||+|-++.. +++......+|||||-|+.+... ++..+.+ ..|++++.|+++.. +++++|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a-~~~v~~N~~~dkVtVI~gd~eev~----LPEKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVT-LENWQFEEWGSQVTVVSSDMREWV----APEKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHH-HHHHHHHTTGGGEEEEESCTTTCC----CSSCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHH-HHHHHhccCCCeEEEEeCcceecc----CCcccCEE
Confidence 35899999999998444 44443333479999999855332 2232222 67999999999875 45799999
Q ss_pred EEeCC-----ChhHHHHHHHHHhccCCCCcEEE
Q 021911 218 FSDVA-----QPDQARILALNASYFLKAGGHFV 245 (305)
Q Consensus 218 ~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv 245 (305)
++... .....+++. ...++|||+|.++
T Consensus 433 VSEwMG~fLl~E~mlevL~-Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSELLGSFADNELSPECLD-GAQHFLKDDGVSI 464 (637)
T ss_dssp ECCCCBTTBGGGCHHHHHH-HHGGGEEEEEEEE
T ss_pred EEEcCcccccccCCHHHHH-HHHHhcCCCcEEc
Confidence 99766 233446666 8889999999763
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.65 E-value=7e-08 Score=85.51 Aligned_cols=85 Identities=11% Similarity=0.090 Sum_probs=61.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccC--CCc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRML--VGM 213 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~--~~~ 213 (305)
.+.++.+|||+|||+|.+|. ++. . ...+|++||+|+ +|++.++++ +|++++++|+...+..... ...
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~----~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~ 90 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDR----DLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQ 90 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCH----HHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTS
T ss_pred CCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCH----HHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCC
Confidence 46788999999999999999 654 2 323399999999 666666554 4899999999875422111 124
Q ss_pred EeEEEEeCCChhHHHHHH
Q 021911 214 VDVIFSDVAQPDQARILA 231 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~ 231 (305)
.|+|++|+|......++.
T Consensus 91 ~~~vvsNlPY~i~~~il~ 108 (252)
T 1qyr_A 91 PLRVFGNLPYNISTPLMF 108 (252)
T ss_dssp CEEEEEECCTTTHHHHHH
T ss_pred ceEEEECCCCCccHHHHH
Confidence 589999999666555555
No 281
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.65 E-value=9.4e-08 Score=85.58 Aligned_cols=85 Identities=15% Similarity=0.068 Sum_probs=63.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.+.++ +|||+|||+|.+|..+++.. .+|++||+|+.++..+.+.... .|++++++|+...+... ...+|.|++
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~-~~v~vi~~D~l~~~~~~--~~~~~~iv~ 116 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG-LPVRLVFQDALLYPWEE--VPQGSLLVA 116 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT-SSEEEEESCGGGSCGGG--SCTTEEEEE
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC-CCEEEEECChhhCChhh--ccCccEEEe
Confidence 56778 99999999999999999983 4899999999655555444432 68999999997765321 136899999
Q ss_pred eCCChhHHHHHH
Q 021911 220 DVAQPDQARILA 231 (305)
Q Consensus 220 d~~~~~~~~~l~ 231 (305)
|+|......++.
T Consensus 117 NlPy~iss~il~ 128 (271)
T 3fut_A 117 NLPYHIATPLVT 128 (271)
T ss_dssp EECSSCCHHHHH
T ss_pred cCcccccHHHHH
Confidence 999544333333
No 282
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.64 E-value=1.7e-08 Score=90.46 Aligned_cols=115 Identities=15% Similarity=0.149 Sum_probs=74.6
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH---c-CCCeEEEEcc
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK---K-RTNVIPIIED 200 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~---~-~~nI~~~~~D 200 (305)
+|..+..|++..++-.++++.+||||||+||.|+..+++.. +...|+++|+.. ++..... . ..+|.....+
T Consensus 63 rSRaa~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~----~~~~~P~~~~~~~~~iv~~~~~ 137 (300)
T 3eld_A 63 VSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGI----EGHEKPIHMQTLGWNIVKFKDK 137 (300)
T ss_dssp SSTTHHHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC----TTSCCCCCCCBTTGGGEEEECS
T ss_pred cchHHHHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecc----ccccccccccccCCceEEeecC
Confidence 55555566555554356789999999999999999999864 344789999975 2100000 0 0234444433
Q ss_pred CCCCcccccCCCcEeEEEEeCCCh------hH---HHHHHHHHhccCCCC-cEEEEEE
Q 021911 201 ARHPAKYRMLVGMVDVIFSDVAQP------DQ---ARILALNASYFLKAG-GHFVISI 248 (305)
Q Consensus 201 ~~~~~~~~~~~~~fD~V~~d~~~~------~~---~~~l~~~a~~~LkpG-G~lv~s~ 248 (305)
+... .+....+|+|+||++.. |+ ..+|. -|.++|+|| |.|++-+
T Consensus 138 ~di~---~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~-~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 138 SNVF---TMPTEPSDTLLCDIGESSSNPLVERDRTMKVLE-NFERWKHVNTENFCVKV 191 (300)
T ss_dssp CCTT---TSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHH-HHHHHCCTTCCEEEEEE
T ss_pred ceee---ecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHH-HHHHHhcCCCCcEEEEe
Confidence 2211 11246899999998833 33 34444 678899999 9999987
No 283
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.63 E-value=3.3e-07 Score=81.73 Aligned_cols=134 Identities=20% Similarity=0.241 Sum_probs=86.4
Q ss_pred CCCCCCEEEEEec------CCCccHHHHHhhhCCC-cEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCC
Q 021911 140 WIKPGARVLYLGA------ASGTTVSHVSDIVGPN-GVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG 212 (305)
Q Consensus 140 ~~~~g~~VLDlG~------G~G~~t~~la~~~~~~-~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~ 212 (305)
....+++|||||| +||+ .+++.+.+. +.|+++|+.+ .. ...+ .+++.|+..... ..
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS---~VLr~~~p~g~~VVavDL~~--------~~-sda~-~~IqGD~~~~~~----~~ 168 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT---AVLRQWLPTGTLLVDSDLND--------FV-SDAD-STLIGDCATVHT----AN 168 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH---HHHHHHSCTTCEEEEEESSC--------CB-CSSS-EEEESCGGGEEE----SS
T ss_pred eecCCCEEEeCCCCCCCCCCCcH---HHHHHhCCCCcEEEEeeCcc--------cc-cCCC-eEEEcccccccc----CC
Confidence 4567999999996 8998 344455676 5999999987 11 1223 559999765432 47
Q ss_pred cEeEEEEeCCCh-------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeE
Q 021911 213 MVDVIFSDVAQP-------------DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFE 279 (305)
Q Consensus 213 ~fD~V~~d~~~~-------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e 279 (305)
+||+|++|++.. ...+....-|.++|+|||.|++-+.. ...+ +++.++++ -|+.++
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ----Gsg~------~~L~~lrk-~F~~VK 237 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE----HSWN------ADLYKLMG-HFSWWT 237 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS----SSCC------HHHHHHHT-TEEEEE
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec----CCCH------HHHHHHHh-hCCeEE
Confidence 899999999821 13444443577899999999998721 1111 12344554 588777
Q ss_pred Eee-cCCCCCceEEEEEEEcCCC
Q 021911 280 QVT-LEPFERDHACVVGGYRMPK 301 (305)
Q Consensus 280 ~~~-l~p~~~~~~~vv~~~~~~~ 301 (305)
.+. -.--+..+.++||.-.+..
T Consensus 238 ~fK~ASRa~SsEvYLVG~gfKg~ 260 (344)
T 3r24_A 238 AFVTNVNASSSEAFLIGANYLGK 260 (344)
T ss_dssp EEEEGGGTTSSCEEEEEEEECSS
T ss_pred EECCCCCCCCeeEEEEeeeccCC
Confidence 663 2223345666777655544
No 284
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.59 E-value=1.2e-07 Score=92.97 Aligned_cols=152 Identities=14% Similarity=0.000 Sum_probs=89.2
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCC--------------CcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGP--------------NGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARH 203 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~--------------~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~ 203 (305)
+.++ +|||.|||+|.+...+++.+.. ...++++|+++.+++-+...+... .+|.+++.|...
T Consensus 243 p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~ 321 (544)
T 3khk_A 243 PYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFL 321 (544)
T ss_dssp CCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTT
T ss_pred cCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhc
Confidence 4454 9999999999999888765420 358999999995543332222211 234346677654
Q ss_pred CcccccCCCcEeEEEEeCCChh--------------------------------HHHHHHHHHhccCCCCcEEEEEEccc
Q 021911 204 PAKYRMLVGMVDVIFSDVAQPD--------------------------------QARILALNASYFLKAGGHFVISIKAN 251 (305)
Q Consensus 204 ~~~~~~~~~~fD~V~~d~~~~~--------------------------------~~~~l~~~a~~~LkpGG~lv~s~~~~ 251 (305)
.+.. ....||+|++|||... +...+ .++.++|||+|++++.++..
T Consensus 322 ~~~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl-~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 322 DDQH--PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWM-LHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp SCSC--TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHH-HHHHHTEEEEEEEEEEEETH
T ss_pred Cccc--ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHH-HHHHHHhccCceEEEEecch
Confidence 4322 2468999999999210 12344 48999999999999998543
Q ss_pred ccCCCCchhhhHHHHHHHHHHCCCcEeEEeecCC--CC---CceEEEEEEEcCC
Q 021911 252 CIDSTVPAEAVFQSEVKKLQQDQFKPFEQVTLEP--FE---RDHACVVGGYRMP 300 (305)
Q Consensus 252 ~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~~l~p--~~---~~~~~vv~~~~~~ 300 (305)
.+...... .....++|.+. +.+..++.+.+ |. -.-++++..+.++
T Consensus 399 ~L~~~~~~---~~~iRk~Lle~-~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 399 SMSSNTNN---EGEIRKTLVEQ-DLVECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp HHHCCGGG---HHHHHHHHHHT-TCEEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred hhhcCcch---HHHHHHHHHhC-CcHhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 32222111 12224555444 34556665543 21 2334455555443
No 285
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.56 E-value=3.8e-08 Score=97.02 Aligned_cols=101 Identities=13% Similarity=0.024 Sum_probs=71.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
...+|||||||.|.++..||+. ..+|++||+|+.++..+...+.+. .+|.+.+.|+.+.... ...++||+|+|.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~v~~~ 141 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA-LEEGEFDLAIGL 141 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH-CCTTSCSEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh-ccCCCccEEEEC
Confidence 4579999999999999999987 358999999997766666666554 4799999998765321 135689999996
Q ss_pred CC---ChhHH--HHHHHHHhccCCCCcEEEEEE
Q 021911 221 VA---QPDQA--RILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 221 ~~---~~~~~--~~l~~~a~~~LkpGG~lv~s~ 248 (305)
-. .++.. ..+. .+.+.|++++..++..
T Consensus 142 e~~ehv~~~~~~~~~~-~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVK-RLLSRLADVTQAVILE 173 (569)
T ss_dssp SCHHHHHHHHCHHHHH-HHHHHHHHHSSEEEEE
T ss_pred cchhcCCCHHHHHHHH-HHHHHhccccceeeEE
Confidence 55 12221 2222 4556678877666654
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.55 E-value=4.5e-07 Score=77.55 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=70.7
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-----CCeEEEEccCCCC------------
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-----TNVIPIIEDARHP------------ 204 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-----~nI~~~~~D~~~~------------ 204 (305)
.+..+|||+|| |..|+.+|+. +.++|++||.++...+.+.+..++. .+|+++..|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 45689999998 5788888875 3689999999997766666555542 4799999997543
Q ss_pred ---cccc----cC--CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEE
Q 021911 205 ---AKYR----ML--VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 246 (305)
Q Consensus 205 ---~~~~----~~--~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~ 246 (305)
+.+. .. ..+||+||+|..... ..+. .+..+|+|||.|++
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~--~~~~-~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRFRV--GCAL-ATAFSITRPVTLLF 152 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSSHH--HHHH-HHHHHCSSCEEEEE
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCCch--hHHH-HHHHhcCCCeEEEE
Confidence 1111 01 268999999987542 4444 56789999998855
No 287
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.53 E-value=4.5e-08 Score=92.43 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=60.8
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccCCCcEeEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~~~~fD~V 217 (305)
.++.+|||+|||+|..+.++|.. ..+|++||+|+.++..+.++++.. .+|++++.|+.+.... ....+||+|
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-~~~~~fDvV 167 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-IKTFHPDYI 167 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-HHHHCCSEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-ccCCCceEE
Confidence 45899999999999999999987 258999999997776666665532 5799999999875321 012489999
Q ss_pred EEeCC
Q 021911 218 FSDVA 222 (305)
Q Consensus 218 ~~d~~ 222 (305)
++|+|
T Consensus 168 ~lDPP 172 (410)
T 3ll7_A 168 YVDPA 172 (410)
T ss_dssp EECCE
T ss_pred EECCC
Confidence 99998
No 288
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.51 E-value=3e-08 Score=88.18 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=58.2
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCCh-------HHHHHHHHHHHcC---CCeEEEEccCCCCcccccC
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSH-------RSGRDLVNMAKKR---TNVIPIIEDARHPAKYRML 210 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~-------~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~ 210 (305)
+.++.+|||+|||+|..+..+|.. .++|+++|+|+ .+++.+.++++.. .+|++++.|+.+.... ..
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~-~~ 156 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA-LV 156 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH-HH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh-hh
Confidence 456789999999999999999986 25899999999 5544443333222 3499999998764321 11
Q ss_pred C--CcEeEEEEeCCCh
Q 021911 211 V--GMVDVIFSDVAQP 224 (305)
Q Consensus 211 ~--~~fD~V~~d~~~~ 224 (305)
. .+||+|++|++.+
T Consensus 157 ~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHCCCSEEEECCCC-
T ss_pred ccCCCccEEEECCCCC
Confidence 2 5899999998743
No 289
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.49 E-value=1.5e-07 Score=93.48 Aligned_cols=101 Identities=19% Similarity=0.147 Sum_probs=71.2
Q ss_pred CCEEEEEecCCCccHHHHHhh---hC---------CCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCccc--
Q 021911 144 GARVLYLGAASGTTVSHVSDI---VG---------PNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKY-- 207 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~---~~---------~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~-- 207 (305)
...|||+|||+|.++..++.. .+ ...+|||||.|+.+...+....... ..|+++..|+++....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 468999999999997543222 22 2349999999986655544444322 5699999999887530
Q ss_pred ccCCCcEeEEEEeCC-----ChhHHHHHHHHHhccCCCCcEEE
Q 021911 208 RMLVGMVDVIFSDVA-----QPDQARILALNASYFLKAGGHFV 245 (305)
Q Consensus 208 ~~~~~~fD~V~~d~~-----~~~~~~~l~~~a~~~LkpGG~lv 245 (305)
...++++|+|++... .....+.|. .+.++|||+|.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld-~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLD-GVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHH-TTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHH-HHHHhCCCCcEEE
Confidence 011479999999776 234556776 7889999999764
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.47 E-value=3.2e-07 Score=83.82 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=63.3
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc--CCCeEEEEccCCCCccccc---CCCcE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK--RTNVIPIIEDARHPAKYRM---LVGMV 214 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~--~~nI~~~~~D~~~~~~~~~---~~~~f 214 (305)
.++|+..+||..||.|..+..|++.+++.++|+|+|.++ ++++.++. ..++++++.++.+...+-. ...++
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp----~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDP----QAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCH----HHHHHHTTCCCTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 578999999999999999999999998899999999999 55555432 2689999999887654311 11369
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|.|+.|..
T Consensus 130 DgILfDLG 137 (347)
T 3tka_A 130 DGILLDLG 137 (347)
T ss_dssp EEEEEECS
T ss_pred cEEEECCc
Confidence 99999876
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.40 E-value=9.9e-07 Score=86.14 Aligned_cols=139 Identities=15% Similarity=0.036 Sum_probs=81.6
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCC------------CcEEEEEeCChHHHHHHH-HHH-HcCCCeEEEEccCCCCc
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGP------------NGVVYAVEFSHRSGRDLV-NMA-KKRTNVIPIIEDARHPA 205 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~------------~~~V~avD~s~~~~~~l~-~~a-~~~~nI~~~~~D~~~~~ 205 (305)
.+.++.+|+|.+||+|.+...+.+.+.. ...++++|+++...+-+. .+. .......+.+.|....+
T Consensus 214 ~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~ 293 (530)
T 3ufb_A 214 DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFP 293 (530)
T ss_dssp CCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSC
T ss_pred ccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCc
Confidence 5788899999999999999888775522 236999999984432211 111 11133445667765432
Q ss_pred cc-ccCCCcEeEEEEeCCCh-------------------hHHHHHHHHHhccCC-------CCcEEEEEEcccccCCCCc
Q 021911 206 KY-RMLVGMVDVIFSDVAQP-------------------DQARILALNASYFLK-------AGGHFVISIKANCIDSTVP 258 (305)
Q Consensus 206 ~~-~~~~~~fD~V~~d~~~~-------------------~~~~~l~~~a~~~Lk-------pGG~lv~s~~~~~i~~~~~ 258 (305)
.. ......||+|++|||.. .+...+. ++.++|| |+|++.+.++...+....
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~-~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~- 371 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQ-LIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDG- 371 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHH-HHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCT-
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHH-HHHHHhhhhhhccCCCceEEEEecchhhhccc-
Confidence 11 11235799999999921 1222333 6666665 799999998543333221
Q ss_pred hhhhHHHHHHHHHHCCCcEeEEeecC
Q 021911 259 AEAVFQSEVKKLQQDQFKPFEQVTLE 284 (305)
Q Consensus 259 ~~~v~~~~~~~l~~~Gf~~~e~~~l~ 284 (305)
.+ ....++|.+. +.+..++.+.
T Consensus 372 ~~---~~iRk~Lle~-~~l~aII~LP 393 (530)
T 3ufb_A 372 IS---ARIKEELLKN-FNLHTIVRLP 393 (530)
T ss_dssp HH---HHHHHHHHHH-SEEEEEEECC
T ss_pred hH---HHHHHHHhhc-CEEEEEEECC
Confidence 11 1123444333 4566666654
No 292
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.33 E-value=3.3e-07 Score=81.42 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=58.0
Q ss_pred CCCCC--CEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHH---HHHHHHHcC--------CCeEEEEccCCCCcc
Q 021911 140 WIKPG--ARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGR---DLVNMAKKR--------TNVIPIIEDARHPAK 206 (305)
Q Consensus 140 ~~~~g--~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~---~l~~~a~~~--------~nI~~~~~D~~~~~~ 206 (305)
.++++ .+|||++||+|..+..+|.. + ++|++||+++.... +.++.++.+ .+|++++.|+.+...
T Consensus 83 ~l~~g~~~~VLDl~~G~G~dal~lA~~-g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~ 159 (258)
T 2oyr_A 83 GIKGDYLPDVVDATAGLGRDAFVLASV-G--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALT 159 (258)
T ss_dssp TCBTTBCCCEEETTCTTCHHHHHHHHH-T--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHST
T ss_pred cccCCCCCEEEEcCCcCCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHH
Confidence 45667 89999999999999999997 2 47999999995422 223333211 368999999876432
Q ss_pred cccCCCcEeEEEEeCCCh
Q 021911 207 YRMLVGMVDVIFSDVAQP 224 (305)
Q Consensus 207 ~~~~~~~fD~V~~d~~~~ 224 (305)
. ....||+|++|++.+
T Consensus 160 ~--~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 160 D--ITPRPQVVYLDPMFP 175 (258)
T ss_dssp T--CSSCCSEEEECCCCC
T ss_pred h--CcccCCEEEEcCCCC
Confidence 2 234799999999844
No 293
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.32 E-value=6.7e-07 Score=72.04 Aligned_cols=87 Identities=16% Similarity=0.209 Sum_probs=61.3
Q ss_pred CCCCCEEEEEecCCCc-cHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 141 IKPGARVLYLGAASGT-TVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~-~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
..+..+|||+|||+|. .+..|++.. ...|+++|+++.++. +++.|+.++... ....||+|.+
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~-------------~v~dDiF~P~~~--~Y~~~DLIYs 95 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG-------------IVRDDITSPRME--IYRGAALIYS 95 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT-------------EECCCSSSCCHH--HHTTEEEEEE
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc-------------eEEccCCCCccc--ccCCcCEEEE
Confidence 3456899999999995 899999853 468999999994322 888999886532 1258999965
Q ss_pred -eCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 -DVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 -d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++|...|..++. -|. . -+.-|+|..
T Consensus 96 irPP~El~~~i~~-lA~-~--v~adliI~p 121 (153)
T 2k4m_A 96 IRPPAEIHSSLMR-VAD-A--VGARLIIKP 121 (153)
T ss_dssp ESCCTTTHHHHHH-HHH-H--HTCEEEEEC
T ss_pred cCCCHHHHHHHHH-HHH-H--cCCCEEEEc
Confidence 666667776665 332 2 344566664
No 294
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.27 E-value=1e-05 Score=75.58 Aligned_cols=145 Identities=15% Similarity=0.093 Sum_probs=93.7
Q ss_pred CEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccccc-----CCCcEeEEE
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRM-----LVGMVDVIF 218 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~-----~~~~fD~V~ 218 (305)
.+||||+||.|.++.-+.+. + --.|.++|+++.+ .+..+.+ ++..+++.|+.+...... ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G-~~~v~avE~d~~a----~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G-FDVKMAVEIDQHA----INTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T-CEEEEEECSCHHH----HHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHC-C-CcEEEEEeCCHHH----HHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 58999999999999998876 2 3367899999944 3333333 567888999987643221 235899999
Q ss_pred EeCCCh-----------hHH-HHHH--HHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcE-eE-Eee
Q 021911 219 SDVAQP-----------DQA-RILA--LNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKP-FE-QVT 282 (305)
Q Consensus 219 ~d~~~~-----------~~~-~~l~--~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~-~e-~~~ 282 (305)
.++||. +.. .++. ..+...++|. +|++.-. .-+.+ .....++...+ .|++.||.+ .. ++.
T Consensus 77 ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~-~~v~ENV-~gl~s-~~~~~~~~~i~-~l~~~GY~v~~~~vl~ 152 (376)
T 3g7u_A 77 GGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL-FFLAENV-PGIMQ-EKYSGIRNKAF-NLVSGDYDILDPIKVK 152 (376)
T ss_dssp ECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS-EEEEEEC-TTTTC-GGGHHHHHHHH-HHHHTTEEECCCEEEE
T ss_pred ecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC-EEEEecc-hHhhc-cCcHHHHHHHH-HHHcCCCccCcEEEEE
Confidence 999963 112 1221 1345567896 4444421 11211 22334556666 888999988 32 333
Q ss_pred ---c-CCCCCceEEEEEEEcC
Q 021911 283 ---L-EPFERDHACVVGGYRM 299 (305)
Q Consensus 283 ---l-~p~~~~~~~vv~~~~~ 299 (305)
+ -|..|..+++||.++-
T Consensus 153 a~dyGvPQ~R~R~~iig~r~~ 173 (376)
T 3g7u_A 153 ASDYGAPTIRTRYFFIGVKKS 173 (376)
T ss_dssp GGGGTCSBCCEEEEEEEEEGG
T ss_pred HhhCCCCCCCcEEEEEEEeCC
Confidence 3 5677899999998654
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.20 E-value=8.1e-06 Score=73.27 Aligned_cols=104 Identities=12% Similarity=0.055 Sum_probs=73.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC----CCcEEEEEeCChH--------------------------HHHHHHHHHHcC-
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG----PNGVVYAVEFSHR--------------------------SGRDLVNMAKKR- 191 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~----~~~~V~avD~s~~--------------------------~~~~l~~~a~~~- 191 (305)
....|||+|+..|..++.+|..+. +..+|+++|..+. ....+.++.++.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 346999999999999999988763 3678999996310 112223333321
Q ss_pred ---CCeEEEEccCCCCcccccCCCcEeEEEEeCCChh-HHHHHHHHHhccCCCCcEEEEEE
Q 021911 192 ---TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPD-QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 192 ---~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~~-~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
++|+++..|+.+..+. ....+||+|++|..... ....|. .+...|+|||.+++-.
T Consensus 186 l~~~~I~li~Gda~etL~~-~~~~~~d~vfIDaD~y~~~~~~Le-~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPT-APIDTLAVLRMDGDLYESTWDTLT-NLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CCSTTEEEEESCHHHHSTT-CCCCCEEEEEECCCSHHHHHHHHH-HHGGGEEEEEEEEESS
T ss_pred CCcCceEEEEeCHHHHHhh-CCCCCEEEEEEcCCccccHHHHHH-HHHhhcCCCEEEEEcC
Confidence 6899999998654322 12468999999998644 345565 8999999999888754
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.18 E-value=1.9e-05 Score=72.93 Aligned_cols=144 Identities=13% Similarity=0.066 Sum_probs=90.9
Q ss_pred CEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
.+||||+||.|.++..+... +- ...|+++|+++.++ +..+.+ ++..+++.|+++..........+|+|+.++|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~----~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVAN----EVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHH----HHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHH----HHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 58999999999999998876 21 23699999999443 333333 4556788899876532111126999999999
Q ss_pred Chh------------HH-HHHH--HHHhccCC--CCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe----
Q 021911 223 QPD------------QA-RILA--LNASYFLK--AGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV---- 281 (305)
Q Consensus 223 ~~~------------~~-~~l~--~~a~~~Lk--pGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~---- 281 (305)
|.. .. .++. ..+...++ |. ++++.-. .++.. ...+...++.|++.||.+...+
T Consensus 78 Cq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV-~~l~~----~~~~~~i~~~l~~~GY~v~~~vl~a~ 151 (343)
T 1g55_A 78 CQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK-YILLENV-KGFEV----SSTRDLLIQTIENCGFQYQEFLLSPT 151 (343)
T ss_dssp ------------------CHHHHHHHHGGGCSSCCS-EEEEEEE-TTGGG----SHHHHHHHHHHHHTTEEEEEEEECGG
T ss_pred CcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC-EEEEeCC-ccccC----HHHHHHHHHHHHHCCCeeEEEEEEHH
Confidence 531 11 1121 13445566 76 4444321 12221 2345666788889999886543
Q ss_pred ec-CCCCCceEEEEEEEcC
Q 021911 282 TL-EPFERDHACVVGGYRM 299 (305)
Q Consensus 282 ~l-~p~~~~~~~vv~~~~~ 299 (305)
++ -|..|..+++||.+..
T Consensus 152 ~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 152 SLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp GGTCSCCCCEEEEEEEESS
T ss_pred HCCCCCcccEEEEEEEeCC
Confidence 23 5778999999998754
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.08 E-value=1.1e-05 Score=72.00 Aligned_cols=78 Identities=14% Similarity=0.153 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccc--cCCCcEeEE
Q 021911 140 WIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYR--MLVGMVDVI 217 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~--~~~~~fD~V 217 (305)
.++++..+||++||.|..+..|++. .++|+++|.++.++..+.+ ++. +++++++.|+.++..+. ....+||.|
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~L~~~g~~~vDgI 93 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRHLAALGVERVDGI 93 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHHHHHcCCCCcCEE
Confidence 5788999999999999999999997 4699999999966555444 333 68999999998875431 122589999
Q ss_pred EEeCC
Q 021911 218 FSDVA 222 (305)
Q Consensus 218 ~~d~~ 222 (305)
++|..
T Consensus 94 L~DLG 98 (285)
T 1wg8_A 94 LADLG 98 (285)
T ss_dssp EEECS
T ss_pred EeCCc
Confidence 99886
No 298
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=98.00 E-value=6.5e-05 Score=68.44 Aligned_cols=144 Identities=10% Similarity=0.076 Sum_probs=92.3
Q ss_pred CEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCCh
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP 224 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~ 224 (305)
++||||.||.|.++.-+-+. + --.|.++|+++.+ .+..+.+-.-.++..|+++..... ...+|+|+..+||.
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-~~~v~a~e~d~~a----~~ty~~N~~~~~~~~DI~~i~~~~--~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-FRIICANEYDKSI----WKTYESNHSAKLIKGDISKISSDE--FPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-CEEEEEEECCTTT----HHHHHHHCCSEEEESCGGGCCGGG--SCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC-C-CEEEEEEeCCHHH----HHHHHHHCCCCcccCChhhCCHhh--CCcccEEEecCCCC
Confidence 57999999999999887665 3 2368899999944 333333323467889998875432 35799999988852
Q ss_pred ------------hHH-HHHH--HHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe-ec----C
Q 021911 225 ------------DQA-RILA--LNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV-TL----E 284 (305)
Q Consensus 225 ------------~~~-~~l~--~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~-~l----~ 284 (305)
|.. .++. .++.+.++|. +|++.-... +.+ ......+...++.|++.||.+...+ +. -
T Consensus 73 ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~g-l~~-~~~~~~~~~i~~~l~~~GY~v~~~vlna~~yGv 149 (331)
T 3ubt_Y 73 SWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVKG-MMA-QRHNKAVQEFIQEFDNAGYDVHIILLNANDYGV 149 (331)
T ss_dssp GTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECCG-GGG-CTTSHHHHHHHHHHHHHTEEEEEEEEEGGGTTC
T ss_pred CcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeecc-ccc-ccccchhhhhhhhhccCCcEEEEEecccccCCC
Confidence 111 1221 1345567896 555543111 111 1223456666788888899876543 22 4
Q ss_pred CCCCceEEEEEEEcC
Q 021911 285 PFERDHACVVGGYRM 299 (305)
Q Consensus 285 p~~~~~~~vv~~~~~ 299 (305)
|..|..+++||.++.
T Consensus 150 PQ~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 150 AQDRKRVFYIGFRKE 164 (331)
T ss_dssp SBCCEEEEEEEEEGG
T ss_pred CcccceEEEEEEcCC
Confidence 678899999998753
No 299
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.96 E-value=0.00019 Score=65.64 Aligned_cols=142 Identities=13% Similarity=0.048 Sum_probs=90.8
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ 223 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~ 223 (305)
..+||||+||.|.++..+... + --.|+++|+++.+......+.. ... +.|+++..... ...+|+|+..+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~---~~~--~~Di~~~~~~~--~~~~D~l~~gpPC 81 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFG---EKP--EGDITQVNEKT--IPDHDILCAGFPC 81 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHS---CCC--BSCGGGSCGGG--SCCCSEEEEECCC
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcC---CCC--cCCHHHcCHhh--CCCCCEEEECCCC
Confidence 579999999999999998876 3 3468999999955444333332 221 68887765432 2469999999995
Q ss_pred h------------h----HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe----ec
Q 021911 224 P------------D----QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV----TL 283 (305)
Q Consensus 224 ~------------~----~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~----~l 283 (305)
. + ...-+. .+...++|. ++++.-.. -+.+ ......|...++.|++.||.+...+ ++
T Consensus 82 Q~fS~ag~~~g~~d~r~~L~~~~~-r~i~~~~P~-~~~~ENV~-gl~~-~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~ 157 (327)
T 2c7p_A 82 QAFSISGKQKGFEDSRGTLFFDIA-RIVREKKPK-VVFMENVK-NFAS-HDNGNTLEVVKNTMNELDYSFHAKVLNALDY 157 (327)
T ss_dssp TTTCTTSCCCGGGSTTSCHHHHHH-HHHHHHCCS-EEEEEEEG-GGGT-GGGGHHHHHHHHHHHHTTBCCEEEEEEGGGG
T ss_pred CCcchhcccCCCcchhhHHHHHHH-HHHHhccCc-EEEEeCcH-HHHh-ccccHHHHHHHHHHHhCCCEEEEEEEEHHHc
Confidence 2 1 111122 344557886 44444211 1111 1223456666788889999876543 23
Q ss_pred -CCCCCceEEEEEEEc
Q 021911 284 -EPFERDHACVVGGYR 298 (305)
Q Consensus 284 -~p~~~~~~~vv~~~~ 298 (305)
-|..|..+++||...
T Consensus 158 GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 158 GIPQKRERIYMICFRN 173 (327)
T ss_dssp TCSBCCEEEEEEEEBG
T ss_pred CCCccceEEEEEEEeC
Confidence 567899999999875
No 300
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.91 E-value=4.1e-05 Score=71.41 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=66.3
Q ss_pred CCEEEEEecCCCccHHHHHhhh--------------CCCcEEEEEeCChHHHHHHHHHHHcC-C-------------CeE
Q 021911 144 GARVLYLGAASGTTVSHVSDIV--------------GPNGVVYAVEFSHRSGRDLVNMAKKR-T-------------NVI 195 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~--------------~~~~~V~avD~s~~~~~~l~~~a~~~-~-------------nI~ 195 (305)
..+|+|+||++|..|+.+++.+ .|..+|+-.|+...--..+.+..... . +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5899999999999998884332 15678888888653222332222210 0 112
Q ss_pred EEEccCCCCcccccCCCcEeEEEEeCCC------h-----------------------------------hHHHHHHHHH
Q 021911 196 PIIEDARHPAKYRMLVGMVDVIFSDVAQ------P-----------------------------------DQARILALNA 234 (305)
Q Consensus 196 ~~~~D~~~~~~~~~~~~~fD~V~~d~~~------~-----------------------------------~~~~~l~~~a 234 (305)
++.+....+....++..+||+|+++.+. | |...+|. ..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~-~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR-AR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH-HH
Confidence 4444444333333456799999997771 1 2233454 77
Q ss_pred hccCCCCcEEEEEEc
Q 021911 235 SYFLKAGGHFVISIK 249 (305)
Q Consensus 235 ~~~LkpGG~lv~s~~ 249 (305)
++.|+|||+|++++.
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 899999999999984
No 301
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.79 E-value=0.00024 Score=66.40 Aligned_cols=79 Identities=13% Similarity=-0.000 Sum_probs=51.5
Q ss_pred CCEEEEEecCCCccHHHHHhhh----------------CCCcEEEEEeCCh-------HHHHHHHHHHHc-C---CCeEE
Q 021911 144 GARVLYLGAASGTTVSHVSDIV----------------GPNGVVYAVEFSH-------RSGRDLVNMAKK-R---TNVIP 196 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~----------------~~~~~V~avD~s~-------~~~~~l~~~a~~-~---~nI~~ 196 (305)
..+|+|+||++|..|+.+.+.+ .|..+|+..|+.. +.+..+.+.+.+ . .+-.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 4799999999999998887661 1456788888761 111122222211 1 23577
Q ss_pred EEccCCCCcccccCCCcEeEEEEeCC
Q 021911 197 IIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 197 ~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
+.+....+....++..+||+|+++.+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a 158 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC 158 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC
T ss_pred EEecchhhhhccCCCCceEEEEecce
Confidence 77777666544455689999999776
No 302
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.76 E-value=0.00038 Score=63.88 Aligned_cols=144 Identities=15% Similarity=0.072 Sum_probs=91.0
Q ss_pred CEEEEEecCCCccHHHHHhhhCCC-cEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPN-GVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~-~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
.++|||+||.|.++.-+.+. +-. -.|.++|+++.+ .+..+.+ ++..++..|+++..........+|+|+..+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a----~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVA----NSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHH----HHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHH----HHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCC
Confidence 47999999999999988775 221 358899999944 3333333 4556778898876543222236999999998
Q ss_pred Ch------------h----HHHHHHHHHhccCC-CCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe-e--
Q 021911 223 QP------------D----QARILALNASYFLK-AGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV-T-- 282 (305)
Q Consensus 223 ~~------------~----~~~~l~~~a~~~Lk-pGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~-~-- 282 (305)
|. + ...-+. .+...++ |. ++++.-.. -+.. ...+...++.|++.||.+...+ +
T Consensus 79 CQ~fS~ag~~~~~~d~r~~L~~~~~-r~i~~~~~P~-~~vlENV~-gl~~----~~~~~~i~~~l~~~GY~v~~~vl~a~ 151 (333)
T 4h0n_A 79 CQPFTRNGKYLDDNDPRTNSFLYLI-GILDQLDNVD-YILMENVK-GFEN----STVRNLFIDKLKECNFIYQEFLLCPS 151 (333)
T ss_dssp CCCSEETTEECCTTCTTSCCHHHHH-HHGGGCTTCC-EEEEEECT-TGGG----SHHHHHHHHHHHHTTEEEEEEEECTT
T ss_pred CcchhhhhhccCCcCcccccHHHHH-HHHHHhcCCC-EEEEecch-hhhh----hhHHHHHHHHHHhCCCeEEEEEecHH
Confidence 53 1 111122 3445565 85 44443211 1111 1234556778889999987654 2
Q ss_pred -c-CCCCCceEEEEEEEcCC
Q 021911 283 -L-EPFERDHACVVGGYRMP 300 (305)
Q Consensus 283 -l-~p~~~~~~~vv~~~~~~ 300 (305)
+ -|..|..+++||.....
T Consensus 152 ~~GvPQ~R~R~fiva~r~~~ 171 (333)
T 4h0n_A 152 TVGVPNSRLRYYCTARRNNL 171 (333)
T ss_dssp TTTCSCCCCEEEEEEEETTS
T ss_pred HcCCCccceEEEEEEEeCCC
Confidence 2 56779999999988763
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.62 E-value=1.3e-05 Score=71.69 Aligned_cols=102 Identities=13% Similarity=0.025 Sum_probs=70.8
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-cccCCCcEeEEEEeCC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-YRMLVGMVDVIFSDVA 222 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~~~~~~~fD~V~~d~~ 222 (305)
+..+||+.+|||..+..+.+. ..+++.||.++...+.+.++.+...+++++..|+..... .......||+||+|+|
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred CCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 456899999999999998874 258999999996655555555444679999999744322 1111247999999999
Q ss_pred Ch---hHHHHHH-HHHhccCCCCcEEEEEE
Q 021911 223 QP---DQARILA-LNASYFLKAGGHFVISI 248 (305)
Q Consensus 223 ~~---~~~~~l~-~~a~~~LkpGG~lv~s~ 248 (305)
.. +..+++. ......+.|+|.+++--
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 54 3334432 12334678999988875
No 304
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.54 E-value=0.0009 Score=61.17 Aligned_cols=144 Identities=10% Similarity=0.053 Sum_probs=89.8
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC-CcEE-EEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP-NGVV-YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~-~~~V-~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
..+||||+||.|.++.-+.+. +- .-.| .++|+++.+.+....+. +.. +++.|+++..........+|+|+..+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~---~~~-~~~~DI~~~~~~~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNF---KEE-VQVKNLDSISIKQIESLNCNTWFMSP 84 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHH---CCC-CBCCCTTTCCHHHHHHTCCCEEEECC
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHC---CCC-cccCChhhcCHHHhccCCCCEEEecC
Confidence 469999999999999988775 21 1256 79999995433333222 222 66789888754322223699999988
Q ss_pred CChhH--------------H-HHHHHHHhc----cC--CCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 222 AQPDQ--------------A-RILALNASY----FL--KAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 222 ~~~~~--------------~-~~l~~~a~~----~L--kpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
||... . .++. ++.+ .+ +|. .+++.-. ..+.. ...+...++.|++.||.+...
T Consensus 85 PCQ~fs~S~ag~~~~~~d~r~~L~~-~~~r~~i~~~~~~P~-~~~lENV-~gl~~----~~~~~~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 85 PCQPYNNSIMSKHKDINDPRAKSVL-HLYRDILPYLINKPK-HIFIENV-PLFKE----SLVFKEIYNILIKNQYYIKDI 157 (327)
T ss_dssp CCTTCSHHHHTTTCTTTCGGGHHHH-HHHHTTGGGCSSCCS-EEEEEEC-GGGGG----SHHHHHHHHHHHHTTCEEEEE
T ss_pred CccCcccccCCCCCCCccccchhHH-HHHHHHHHHhccCCC-EEEEEch-hhhcC----hHHHHHHHHHHHhCCCEEEEE
Confidence 85432 1 2333 4444 44 565 4444321 11111 234556678888999998765
Q ss_pred e----ec-CCCCCceEEEEEEEcC
Q 021911 281 V----TL-EPFERDHACVVGGYRM 299 (305)
Q Consensus 281 ~----~l-~p~~~~~~~vv~~~~~ 299 (305)
+ ++ -|..|..+++||.++.
T Consensus 158 vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 158 ICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp EECGGGGTCSBCCCEEEEEEESSC
T ss_pred EEeHHHcCCCccceEEEEEEEeCC
Confidence 4 22 5678999999998653
No 305
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.50 E-value=0.00018 Score=66.65 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=68.2
Q ss_pred CCEEEEEecCCCccHHHHHhh---------------hCCCcEEEEEeCChHHHHHHHHHHHc---CCCeEEEEccCCCCc
Q 021911 144 GARVLYLGAASGTTVSHVSDI---------------VGPNGVVYAVEFSHRSGRDLVNMAKK---RTNVIPIIEDARHPA 205 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~---------------~~~~~~V~avD~s~~~~~~l~~~a~~---~~nI~~~~~D~~~~~ 205 (305)
..+|+|+||++|..|+.+.+. -.|..+|+..|+...-...+.+.... ..+-.++.+....+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 478999999999988766554 13567899999876322233222221 013466666655554
Q ss_pred ccccCCCcEeEEEEeCCC------h------------------------------hHHHHHHHHHhccCCCCcEEEEEEc
Q 021911 206 KYRMLVGMVDVIFSDVAQ------P------------------------------DQARILALNASYFLKAGGHFVISIK 249 (305)
Q Consensus 206 ~~~~~~~~fD~V~~d~~~------~------------------------------~~~~~l~~~a~~~LkpGG~lv~s~~ 249 (305)
...++..++|+|+++.+. | |...+|. .-++.|+|||+|++++.
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~-~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLR-CRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHH-HHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCceEEEEEe
Confidence 333456799999997761 1 1223354 67889999999999874
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.35 E-value=0.00059 Score=63.04 Aligned_cols=61 Identities=11% Similarity=-0.072 Sum_probs=48.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPA 205 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~ 205 (305)
++..|||||+|+|.+|..|++... ..+|++||++++.+..+.+.. ..+|++++..|+..++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-EGSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-TTSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-cCCCEEEEECCccchh
Confidence 468999999999999999998743 247999999996555555444 3479999999997664
No 307
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.33 E-value=0.002 Score=61.87 Aligned_cols=151 Identities=16% Similarity=0.154 Sum_probs=93.1
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccc--------------c
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYR--------------M 209 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~--------------~ 209 (305)
..++|||+||.|.++.-+... + --.|+++|+++.+......+....++..+++.|+++..... .
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G-~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-G-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-T-EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 468999999999999988765 2 23589999999554443333222245667788886653110 1
Q ss_pred CCCcEeEEEEeCCChhHH----------------------HHHH--HHHhccCCCCcEEEEEEcccccCCCCchhhhHHH
Q 021911 210 LVGMVDVIFSDVAQPDQA----------------------RILA--LNASYFLKAGGHFVISIKANCIDSTVPAEAVFQS 265 (305)
Q Consensus 210 ~~~~fD~V~~d~~~~~~~----------------------~~l~--~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~ 265 (305)
....+|+|+..+||.... .++. ..+...++|. +|++.-. .-+.+ .+....|..
T Consensus 166 ~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk-~fvlENV-~gl~s-~~~g~~f~~ 242 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA-MFVLENV-KNLKS-HDKGKTFRI 242 (482)
T ss_dssp HSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS-EEEEEEE-TTTTT-GGGGHHHHH
T ss_pred cCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc-EEEEeCc-HHHhc-ccCCcHHHH
Confidence 135789999999864200 1222 0234456786 4444321 11211 123346677
Q ss_pred HHHHHHHCCCcEeE----------Ee---ecCCCCCceEEEEEEEcC
Q 021911 266 EVKKLQQDQFKPFE----------QV---TLEPFERDHACVVGGYRM 299 (305)
Q Consensus 266 ~~~~l~~~Gf~~~e----------~~---~l~p~~~~~~~vv~~~~~ 299 (305)
.++.|++.||.+.+ ++ ++-|..|..+++||.++.
T Consensus 243 i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~vPQ~R~R~fivg~r~~ 289 (482)
T 3me5_A 243 IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRD 289 (482)
T ss_dssp HHHHHHHTTEEETTTTCCSTTCTTEEEGGGTSSBCCEEEEEEEEEGG
T ss_pred HHHHHhcCCcEEEeccccCcccceeeeccccCCccceEEEEEEEecC
Confidence 77888889987742 22 346888999999998764
No 308
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.24 E-value=0.00046 Score=62.05 Aligned_cols=59 Identities=24% Similarity=0.140 Sum_probs=43.2
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK 189 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~ 189 (305)
+...|+..++..+ ..+++.|||++||+|+++..++.. + .+++++|+++.+++.+.+.++
T Consensus 220 ~p~~l~~~~i~~~----~~~~~~vlD~f~GsGt~~~~a~~~-g--~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 220 FPLELAERLVRMF----SFVGDVVLDPFAGTGTTLIAAARW-G--RRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp SCHHHHHHHHHHH----CCTTCEEEETTCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHH
Confidence 4456666665422 367899999999999999988775 2 489999999966555554443
No 309
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.22 E-value=0.0017 Score=58.67 Aligned_cols=141 Identities=19% Similarity=0.151 Sum_probs=82.7
Q ss_pred CCCCEEEEEecCCCccHHHHH---hhhCCCcE--EEEEeCC--------hHHHHHHHHHHHc-C-----CC--eEEEEcc
Q 021911 142 KPGARVLYLGAASGTTVSHVS---DIVGPNGV--VYAVEFS--------HRSGRDLVNMAKK-R-----TN--VIPIIED 200 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la---~~~~~~~~--V~avD~s--------~~~~~~l~~~a~~-~-----~n--I~~~~~D 200 (305)
++.-+|||+|-|+|...+... ....+..+ .+++|.. +....++.+.... . .+ +.+...|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 344689999999998654433 23345554 4566642 1111222222211 1 23 4566788
Q ss_pred CCCCcccccCCCcEeEEEEeCCC----h--hHHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCC
Q 021911 201 ARHPAKYRMLVGMVDVIFSDVAQ----P--DQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQ 274 (305)
Q Consensus 201 ~~~~~~~~~~~~~fD~V~~d~~~----~--~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~G 274 (305)
+....+. .....||+|+.|.-. | +..+++. .++++++|||+|+-.+ + .. .....|+++|
T Consensus 175 a~~~l~~-l~~~~~Da~flDgFsP~kNPeLWs~e~f~-~l~~~~~pgg~laTYt---a------ag----~VRR~L~~aG 239 (308)
T 3vyw_A 175 ARKRIKE-VENFKADAVFHDAFSPYKNPELWTLDFLS-LIKERIDEKGYWVSYS---S------SL----SVRKSLLTLG 239 (308)
T ss_dssp HHHHGGG-CCSCCEEEEEECCSCTTTSGGGGSHHHHH-HHHTTEEEEEEEEESC---C------CH----HHHHHHHHTT
T ss_pred HHHHHhh-hcccceeEEEeCCCCcccCcccCCHHHHH-HHHHHhCCCcEEEEEe---C------cH----HHHHHHHHCC
Confidence 8654332 123479999998752 2 4677887 9999999999887443 1 11 1246688999
Q ss_pred CcEeEEeecCCCCCceEEEEEEEcCC
Q 021911 275 FKPFEQVTLEPFERDHACVVGGYRMP 300 (305)
Q Consensus 275 f~~~e~~~l~p~~~~~~~vv~~~~~~ 300 (305)
|++.+.- .+.+..-+.+|.++.+
T Consensus 240 F~V~k~~---G~g~KReml~A~~~~~ 262 (308)
T 3vyw_A 240 FKVGSSR---EIGRKRKGTVASLKAP 262 (308)
T ss_dssp CEEEEEE---CC---CEEEEEESSSC
T ss_pred CEEEecC---CCCCCCceeEEecCCC
Confidence 9987654 4555455677776543
No 310
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.77 E-value=0.006 Score=61.08 Aligned_cols=126 Identities=17% Similarity=0.087 Sum_probs=80.3
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhC------C-----CcEEEEEeCChHHHHHHHHHHH--------------cC-----
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVG------P-----NGVVYAVEFSHRSGRDLVNMAK--------------KR----- 191 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~------~-----~~~V~avD~s~~~~~~l~~~a~--------------~~----- 191 (305)
++.-+|||+|.|+|...+.+.+.+. | ..+++++|..|-...++.+... ..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 3457999999999998888776541 1 1478999985433334433211 11
Q ss_pred -----------CCeEEEEccCCCCcccc--cCCCcEeEEEEeCCCh------hHHHHHHHHHhccCCCCcEEEEEEcccc
Q 021911 192 -----------TNVIPIIEDARHPAKYR--MLVGMVDVIFSDVAQP------DQARILALNASYFLKAGGHFVISIKANC 252 (305)
Q Consensus 192 -----------~nI~~~~~D~~~~~~~~--~~~~~fD~V~~d~~~~------~~~~~l~~~a~~~LkpGG~lv~s~~~~~ 252 (305)
-.+.++..|+.+..+.. .....||++|+|...| +..+++. .+.++++||+.+...+ |
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~-~l~~~~~~g~~~~t~~---~ 212 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFN-AMARMTRPGGTFSTFT---A 212 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHH-HHHHHEEEEEEEEESC---C
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHH-HHHHHhCCCCEEEecc---C
Confidence 13556677875543221 0136899999988744 3477777 8889999998866443 2
Q ss_pred cCCCCchhhhHHHHHHHHHHCCCcEeEEe
Q 021911 253 IDSTVPAEAVFQSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 253 i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~ 281 (305)
. ......|.++||.+....
T Consensus 213 ------~----~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 213 ------A----GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ------C----HHHHHHHHHTTCEEEEEE
T ss_pred ------c----HHHHHHHHhCCeEEEecc
Confidence 1 122466788999877643
No 311
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.51 E-value=0.0032 Score=56.66 Aligned_cols=145 Identities=14% Similarity=0.087 Sum_probs=83.7
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcE-EEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-CCcEeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGV-VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-VGMVDVIFS 219 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~-V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-~~~fD~V~~ 219 (305)
+...+||||+||.|.++..+.+. +-... |+++|+++.+......+ .++..++..|+++....... ...+|+|+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N---~~~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVR---HQGKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHH---TTTCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHh---CCCCceeCCChHHccHHHhcccCCcCEEEe
Confidence 44679999999999999888765 33333 79999999543332221 24567788999877543211 247999999
Q ss_pred eCCChh-------------HH-HHHH--HHHhccCCCCc------EEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcE
Q 021911 220 DVAQPD-------------QA-RILA--LNASYFLKAGG------HFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKP 277 (305)
Q Consensus 220 d~~~~~-------------~~-~~l~--~~a~~~LkpGG------~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~ 277 (305)
.+||.. .. .++. ..+.+.++|.- ++++.-.. -+.+. ....+ .+.| +..+.+
T Consensus 90 gpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~-gl~~~--~~~~~---~~~l-~~~~~v 162 (295)
T 2qrv_A 90 GSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVV-AMGVS--DKRDI---SRFL-ESNPVM 162 (295)
T ss_dssp CCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEES-SBCHH--HHHHH---HHHH-TSCCCC
T ss_pred cCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCc-chhhc--CccHH---HHHH-hcCcEE
Confidence 988531 11 1221 03444567752 45554211 11111 11111 2223 345777
Q ss_pred eEEeecCCCCCceEEEEEEEc
Q 021911 278 FEQVTLEPFERDHACVVGGYR 298 (305)
Q Consensus 278 ~e~~~l~p~~~~~~~vv~~~~ 298 (305)
+...++-|..|..+++ +.++
T Consensus 163 l~a~~~~PQ~R~R~~i-~~~~ 182 (295)
T 2qrv_A 163 IDAKEVSAAHRARYFW-GNLP 182 (295)
T ss_dssp EEGGGTSSBCCEEEEE-ECCT
T ss_pred eecceECCccCcEEEE-EEec
Confidence 7766667888888766 5543
No 312
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.49 E-value=0.029 Score=57.02 Aligned_cols=84 Identities=17% Similarity=0.081 Sum_probs=51.4
Q ss_pred CcEeEEEEeCCCh----------------h----HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHH
Q 021911 212 GMVDVIFSDVAQP----------------D----QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQ 271 (305)
Q Consensus 212 ~~fD~V~~d~~~~----------------~----~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~ 271 (305)
+.+|+|+.-+||. + ...-+. .+...++|- +|++.-. .-+.+ ......|...+..|.
T Consensus 378 G~VDvl~GGpPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~-riv~~~rPk-~fvlENV-~glls-~~~g~~~~~il~~l~ 453 (784)
T 4ft4_B 378 GDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFM-DIVAYLKPK-YVLMENV-VDILK-FADGYLGKYALSCLV 453 (784)
T ss_dssp TSCSEEEECCCCCSSSGGGGGSCTTSTTTSTTCHHHHHHH-HHHHHHCCS-EEEEEEE-GGGGT-GGGGHHHHHHHHHHH
T ss_pred CCeEEEEecCCCcchhhhhcccCcCccccCchhHHHHHHH-HHHHHHCCC-EEEEEec-CCccc-cccchHHHHHHHHHH
Confidence 4689999988852 1 111222 455678997 4444321 11111 223446667788889
Q ss_pred HCCCcEeEEee-c----CCCCCceEEEEEEEcC
Q 021911 272 QDQFKPFEQVT-L----EPFERDHACVVGGYRM 299 (305)
Q Consensus 272 ~~Gf~~~e~~~-l----~p~~~~~~~vv~~~~~ 299 (305)
+.||.+...+- . -|..|..+++||.++-
T Consensus 454 ~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~d 486 (784)
T 4ft4_B 454 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSS 486 (784)
T ss_dssp HTTCEEEEEEEEGGGGTCSSCCEEEEEEEECTT
T ss_pred hCCCeeeeeecCHHHcCCCcccccceeeeeccC
Confidence 99999875442 1 4677899999997653
No 313
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.41 E-value=0.028 Score=58.42 Aligned_cols=146 Identities=12% Similarity=0.107 Sum_probs=88.7
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-CCCeEEEEccCCCCc------------cccc-
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-RTNVIPIIEDARHPA------------KYRM- 209 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-~~nI~~~~~D~~~~~------------~~~~- 209 (305)
..++|||+||.|.++.-|... +-.-.|.|+|+++.+. +..+. .++..++..|+..+. ....
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~----~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAA----QAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHH----HHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHH----HHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcc
Confidence 468999999999999988765 2112688999999443 33332 256677777753321 0001
Q ss_pred CCCcEeEEEEeCCChh------------------HHHHHHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHH
Q 021911 210 LVGMVDVIFSDVAQPD------------------QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQ 271 (305)
Q Consensus 210 ~~~~fD~V~~d~~~~~------------------~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~ 271 (305)
....+|+|+..+||.. ....+. .+...++|- +|++.-.. -+.+ ......+...+..|.
T Consensus 615 ~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~-riv~~~rPk-~~llENV~-glls-~~~~~~~~~i~~~L~ 690 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL-SYCDYYRPR-FFLLENVR-NFVS-FKRSMVLKLTLRCLV 690 (1002)
T ss_dssp CTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHH-HHHHHHCCS-EEEEEEEG-GGGT-TGGGHHHHHHHHHHH
T ss_pred cCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHH-HHHHHhCCC-EEEEeccH-HHhc-cCcchHHHHHHHHHH
Confidence 1247999999888521 011122 455667886 44443211 1111 122345666678888
Q ss_pred HCCCcEeEEe-ec----CCCCCceEEEEEEEc
Q 021911 272 QDQFKPFEQV-TL----EPFERDHACVVGGYR 298 (305)
Q Consensus 272 ~~Gf~~~e~~-~l----~p~~~~~~~vv~~~~ 298 (305)
+.||.+...+ .. -|..|..+++||...
T Consensus 691 ~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r~ 722 (1002)
T 3swr_A 691 RMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 722 (1002)
T ss_dssp HHTCEEEEEEEEGGGGTCSBCCEEEEEEEECT
T ss_pred hcCCeEEEEEEEHHHCCCCccceEEEEEEEeC
Confidence 8899876543 21 567789999999864
No 314
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.27 E-value=0.0064 Score=53.40 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=41.2
Q ss_pred hhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHH
Q 021911 125 RSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMA 188 (305)
Q Consensus 125 ~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a 188 (305)
...|+..++.. ...+++.|||.+||+|+++..++.. + .+++++|+++.++..+.+.+
T Consensus 198 p~~l~~~~i~~----~~~~~~~vlD~f~GsGtt~~~a~~~-g--r~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 198 PRDLIERIIRA----SSNPNDLVLDCFMGSGTTAIVAKKL-G--RNFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp CHHHHHHHHHH----HCCTTCEEEESSCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHH
T ss_pred CHHHHHHHHHH----hCCCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHH
Confidence 44566666532 3468899999999999988887765 3 48999999995554444444
No 315
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.15 E-value=0.0093 Score=56.04 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=46.9
Q ss_pred CCCCCEEEEEecCCCccHHHHH-hhhCCCcEEEEEeCChHHHHHHHHHHHc-----C-CCeEEEEc
Q 021911 141 IKPGARVLYLGAASGTTVSHVS-DIVGPNGVVYAVEFSHRSGRDLVNMAKK-----R-TNVIPIIE 199 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la-~~~~~~~~V~avD~s~~~~~~l~~~a~~-----~-~nI~~~~~ 199 (305)
++++..|+|+||..|.++..++ ...++.++|+|+|.+|.....+.++.+. . +||+++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 4788999999999999999988 4444347999999999888888777765 2 56666544
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.01 E-value=0.011 Score=53.64 Aligned_cols=102 Identities=18% Similarity=0.317 Sum_probs=63.8
Q ss_pred ccccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-cccCCCc
Q 021911 136 VDNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-YRMLVGM 213 (305)
Q Consensus 136 l~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~~~~~~~ 213 (305)
|....++++++||-+|||+ |..+..+|+..+ .+|+++|.++.. ++.+++..--..+..+-.+... .....+.
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~----~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~ 232 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAK----LNLARRLGAEVAVNARDTDPAAWLQKEIGG 232 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHH----HHHHHHTTCSEEEETTTSCHHHHHHHHHSS
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHH----HHHHHHcCCCEEEeCCCcCHHHHHHHhCCC
Confidence 3344678999999999875 778888888764 489999999844 3344443211222211111111 0001237
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+|+.+...+.. +. .+.++|+++|++++.
T Consensus 233 ~d~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 233 AHGVLVTAVSPKA---FS-QAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEEESSCCHHH---HH-HHHHHEEEEEEEEEC
T ss_pred CCEEEEeCCCHHH---HH-HHHHHhccCCEEEEe
Confidence 9999877665543 33 566899999999875
No 317
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.98 E-value=0.0084 Score=53.70 Aligned_cols=88 Identities=13% Similarity=0.101 Sum_probs=52.1
Q ss_pred CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh---h--------------------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 192 TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP---D--------------------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 192 ~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~---~--------------------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.++.+++.|+.+.... +..++||+|++|+|.. + ...++. ++.++|||+|.|++.+
T Consensus 20 ~~~~i~~gD~~~~l~~-l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~-~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLAS-FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWR-EVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTT-SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhh-CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHH-HHHHHcCCCcEEEEEE
Confidence 4678999998764321 2347999999999931 0 123444 8899999999999987
Q ss_pred cccccCCCC-chh--hhH-HHHHHHHHHCCCcEeEEe
Q 021911 249 KANCIDSTV-PAE--AVF-QSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 249 ~~~~i~~~~-~~~--~v~-~~~~~~l~~~Gf~~~e~~ 281 (305)
......... ... .-+ ......+++.||.....+
T Consensus 98 ~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~i 134 (297)
T 2zig_A 98 GDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPI 134 (297)
T ss_dssp CCEEEECC----EEEECHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCccccccCCcccccccHHHHHHHHHHcCCeeeccE
Confidence 321111100 000 001 122345678899876543
No 318
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.91 E-value=0.036 Score=51.99 Aligned_cols=149 Identities=12% Similarity=0.056 Sum_probs=85.0
Q ss_pred CEEEEEecCCCccHHHHHhhhCCCcE----EEEEeCChHHHHHHHHHHHcCCCe--------------------------
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPNGV----VYAVEFSHRSGRDLVNMAKKRTNV-------------------------- 194 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~~~----V~avD~s~~~~~~l~~~a~~~~nI-------------------------- 194 (305)
.+||||+||.|.....+-+.-.+--. |.++|+++.+......+......+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 69999999999998888765100113 889999996654443333221000
Q ss_pred -------E----------EEEccCCCCcccccCCCcEeEEEEeCCCh------------h---H-HHHHHHHHhc-----
Q 021911 195 -------I----------PIIEDARHPAKYRMLVGMVDVIFSDVAQP------------D---Q-ARILALNASY----- 236 (305)
Q Consensus 195 -------~----------~~~~D~~~~~~~~~~~~~fD~V~~d~~~~------------~---~-~~~l~~~a~~----- 236 (305)
. ....|+++.... ..+..+|+|+..+||. + . ..++. ++.+
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~-~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~-~~~rii~~~ 168 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKD-NFPKNIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGLLW-EIERILEEI 168 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTT-TSCSSCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGGHH-HHHHHHHHH
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHh-hCCCCCcEEEEeCCCCCHHHhCCCCCCCccccccchhHH-HHHHHHHHh
Confidence 0 023666655433 2345689999988852 1 1 11221 2222
Q ss_pred ------cCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHHCCCcEeEEe-e---c-CCCCCceEEEEEEEc
Q 021911 237 ------FLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV-T---L-EPFERDHACVVGGYR 298 (305)
Q Consensus 237 ------~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~~Gf~~~e~~-~---l-~p~~~~~~~vv~~~~ 298 (305)
.++|. ++++.-. .-+.+ ......+...++.|++.||.+...+ . + -|..|..+++||..+
T Consensus 169 ~~k~~~~~~Pk-~~l~ENV-~gl~~-~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~ 238 (403)
T 4dkj_A 169 KNSFSKEEMPK-YLLMENV-KNLLS-HKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRD 238 (403)
T ss_dssp HHHSCGGGSCS-EEEEEEE-GGGGS-HHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEH
T ss_pred hhhhccccCCC-EEEEecc-hhhhh-hccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcC
Confidence 26785 4444321 11111 1122355666788889999876543 2 2 566789999999764
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.89 E-value=0.017 Score=53.72 Aligned_cols=103 Identities=18% Similarity=0.200 Sum_probs=64.6
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCC-cc-cc-c-CCC
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHP-AK-YR-M-LVG 212 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~-~~-~~-~-~~~ 212 (305)
...++++++||.+|||+ |..+..+|+..+ ..+|+++|.++. .++.+++. ....+..+-.+. .. .. . ...
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~----~~~~a~~l-Ga~~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPE----RLKLLSDA-GFETIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHH----HHHHHHTT-TCEEEETTSSSCHHHHHHHHHSSS
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHH----HHHHHHHc-CCcEEcCCCcchHHHHHHHHhCCC
Confidence 34678999999999876 778888888765 238999999983 34445543 233332221111 11 00 0 112
Q ss_pred cEeEEEEeCCChh-----------HHHHHHHHHhccCCCCcEEEEE
Q 021911 213 MVDVIFSDVAQPD-----------QARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 213 ~fD~V~~d~~~~~-----------~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.||+||-....+. ....+. .+.++|+++|++++.
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~-~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGALN-SLFDVVRAGGAIGIP 298 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHHHH-HHHHHEEEEEEEECC
T ss_pred CCCEEEECCCCccccccccccccccHHHHH-HHHHHHhcCCEEEEe
Confidence 6999997665432 122454 677899999998764
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.83 E-value=0.031 Score=51.39 Aligned_cols=100 Identities=18% Similarity=0.304 Sum_probs=61.5
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c-ccCCCcEe
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y-RMLVGMVD 215 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~-~~~~~~fD 215 (305)
..++++++||-+|||+ |..+..+|+..+ ...|+++|.++... +.+++..--..+..+-.+... . ......||
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~----~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRL----ELAKQLGATHVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHH----HHHHHHTCSEEEETTTSCHHHHHHHHTTSCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHH----HHHHHcCCCEEecCCccCHHHHHHHhcCCCCc
Confidence 3678999999999875 677788888765 22799999998443 333322111222221111111 0 01123799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||-....+. .+. .+.+.|+++|++++.
T Consensus 261 ~vid~~g~~~---~~~-~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 261 FALESTGSPE---ILK-QGVDALGILGKIAVV 288 (371)
T ss_dssp EEEECSCCHH---HHH-HHHHTEEEEEEEEEC
T ss_pred EEEECCCCHH---HHH-HHHHHHhcCCEEEEe
Confidence 9997766543 233 666899999999875
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.82 E-value=0.012 Score=53.59 Aligned_cols=96 Identities=15% Similarity=0.096 Sum_probs=62.5
Q ss_pred ccccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcE
Q 021911 136 VDNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 136 l~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
|....++++++||-+|+|+ |..+..+|+..+ .+|+++|.++... +.+++..--..+ .|. .. ....+
T Consensus 169 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~----~~~~~lGa~~v~-~~~---~~---~~~~~ 235 (348)
T 3two_A 169 LKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKK----QDALSMGVKHFY-TDP---KQ---CKEEL 235 (348)
T ss_dssp HHHTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTH----HHHHHTTCSEEE-SSG---GG---CCSCE
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHH----HHHHhcCCCeec-CCH---HH---HhcCC
Confidence 3344688999999999864 667778888764 4899999998443 333333111222 222 11 12389
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+||-....+.. +. .+.++|+++|++++.-
T Consensus 236 D~vid~~g~~~~---~~-~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 236 DFIISTIPTHYD---LK-DYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEEECCCSCCC---HH-HHHTTEEEEEEEEECC
T ss_pred CEEEECCCcHHH---HH-HHHHHHhcCCEEEEEC
Confidence 999976665532 23 5668999999998863
No 322
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.80 E-value=0.062 Score=47.17 Aligned_cols=104 Identities=9% Similarity=0.165 Sum_probs=69.9
Q ss_pred CCEEEEEecCCCccHHHHHhh---h---CCCcEEEEEeC-----Ch----------------------HHHHHHHHHHH-
Q 021911 144 GARVLYLGAASGTTVSHVSDI---V---GPNGVVYAVEF-----SH----------------------RSGRDLVNMAK- 189 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~---~---~~~~~V~avD~-----s~----------------------~~~~~l~~~a~- 189 (305)
...|+|+|+-.|..+..++.. + ++..+|+++|. .+ ..++++++...
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 469999999999999887753 2 34578999983 11 11222222111
Q ss_pred -----c-CCCeEEEEccCCCCccc---ccCCCcEeEEEEeCCChh-HHHHHHHHHhccCCCCcEEEEEE
Q 021911 190 -----K-RTNVIPIIEDARHPAKY---RMLVGMVDVIFSDVAQPD-QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 190 -----~-~~nI~~~~~D~~~~~~~---~~~~~~fD~V~~d~~~~~-~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
. ..+|+++.+++.+..+. .....+||+|++|.-... ....+. .+...|+|||.+++-.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le-~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLE-AIRPYLTKGSIVAFDE 217 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHH-HHGGGEEEEEEEEESS
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHH-HHHHHhCCCcEEEEcC
Confidence 1 16899999998664322 112347999999998643 344555 7889999999998865
No 323
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.66 E-value=0.056 Score=53.81 Aligned_cols=124 Identities=15% Similarity=0.081 Sum_probs=75.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC------C-----CcEEEEEeC---ChHHHHHHHH-----------HHHcC------
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG------P-----NGVVYAVEF---SHRSGRDLVN-----------MAKKR------ 191 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~------~-----~~~V~avD~---s~~~~~~l~~-----------~a~~~------ 191 (305)
+.-+|||+|-|+|...+...+.+. | .-.++++|. ++.-+...++ .....
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 446999999999998877766541 1 235889998 5533331111 01111
Q ss_pred ----------CCeEEEEccCCCCcccc--cCCCcEeEEEEeCCCh------hHHHHHHHHHhccCCCCcEEEEEEccccc
Q 021911 192 ----------TNVIPIIEDARHPAKYR--MLVGMVDVIFSDVAQP------DQARILALNASYFLKAGGHFVISIKANCI 253 (305)
Q Consensus 192 ----------~nI~~~~~D~~~~~~~~--~~~~~fD~V~~d~~~~------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i 253 (305)
-.+.+...|+.+..+.. .....||+|+.|...| +..+++. .+.++++||+.+...+ +
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~-~l~~~~~~g~~~~t~~---~- 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFN-AMARLARPGGTLATFT---S- 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHH-HHHHHEEEEEEEEESC---C-
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHH-HHHHHhCCCCEEEecc---C-
Confidence 12345556665432210 0135799999988743 3667776 8899999999876543 1
Q ss_pred CCCCchhhhHHHHHHHHHHCCCcEeEE
Q 021911 254 DSTVPAEAVFQSEVKKLQQDQFKPFEQ 280 (305)
Q Consensus 254 ~~~~~~~~v~~~~~~~l~~~Gf~~~e~ 280 (305)
. ......|++.||.+...
T Consensus 221 -----~----~~vr~~L~~aGf~v~~~ 238 (676)
T 3ps9_A 221 -----A----GFVRRGLQDAGFTMQKR 238 (676)
T ss_dssp -----C----HHHHHHHHHHTCEEEEE
T ss_pred -----c----HHHHHHHHhCCeEEEec
Confidence 0 12245667889987654
No 324
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.53 E-value=0.025 Score=51.33 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=52.9
Q ss_pred CCeEEEEccCCCCcccccCCCcEeEEEEeCCCh-----------------hHHHHHHHHHhccCCCCcEEEEEEcccccC
Q 021911 192 TNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQP-----------------DQARILALNASYFLKAGGHFVISIKANCID 254 (305)
Q Consensus 192 ~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~-----------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~ 254 (305)
....+++.|+...... +..++||+|++|+|-. .....+. ++.++|||+|.+++.+......
T Consensus 13 ~~~~ii~gD~~~~l~~-l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~-~~~rvLk~~G~i~i~~~d~~~~ 90 (323)
T 1boo_A 13 SNGSMYIGDSLELLES-FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAK-VVNKKLKPDGSFVVDFGGAYMK 90 (323)
T ss_dssp SSEEEEESCHHHHGGG-SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEECCCEET
T ss_pred CCceEEeCcHHHHHhh-CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHH-HHHHHCcCCcEEEEEECCEecC
Confidence 4577889998654321 2356899999999931 2445555 7899999999999987211000
Q ss_pred CCC-chhhhHHHHHHHHHHCCCcEeEEe
Q 021911 255 STV-PAEAVFQSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 255 ~~~-~~~~v~~~~~~~l~~~Gf~~~e~~ 281 (305)
... .....+...++.++..||.....+
T Consensus 91 g~~~~~~~~~~~i~~~~~~~Gf~~~~~i 118 (323)
T 1boo_A 91 GVPARSIYNFRVLIRMIDEVGFFLAEDF 118 (323)
T ss_dssp TEEEECCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcccccchHHHHHHHHHhCCCEEEEEE
Confidence 000 000111222344577899876543
No 325
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.46 E-value=0.0074 Score=68.67 Aligned_cols=100 Identities=21% Similarity=0.269 Sum_probs=50.5
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCC----CcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCcccccCCCcE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGP----NGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~----~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
.|..+|||+|+|+|..+..+.+.+.. ..+.+-.|+|+ .+.+.++++ -+|.....|...+.. +....|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~----~~~~~a~~~f~~~di~~~~~d~~~~~~--~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNP----QALEAAQAKLEQLHVTQGQWDPANPAP--GSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSS----SSTTTTTTTHHHHTEEEECCCSSCCCC-------C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCCh----HHHHHHHHHhhhccccccccccccccc--CCCCce
Confidence 56789999999999998888777642 22566779987 333333333 133333234333211 123579
Q ss_pred eEEEEeCC---ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVA---QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~---~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+|++... .++....+. +++++|||+|+|++..
T Consensus 1313 dlvia~~vl~~t~~~~~~l~-~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVG-NMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CEEEEECC---------------------CCEEEEEE
T ss_pred eEEEEcccccccccHHHHHH-HHHHhcCCCcEEEEEe
Confidence 99997544 345666777 9999999999998864
No 326
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.42 E-value=0.013 Score=53.69 Aligned_cols=102 Identities=20% Similarity=0.228 Sum_probs=61.4
Q ss_pred cccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEcc---CCCCc-ccc-cC
Q 021911 137 DNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIED---ARHPA-KYR-ML 210 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D---~~~~~-~~~-~~ 210 (305)
+...++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++.. ++.+++..--..+..+ ..+.. ... ..
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~----~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATR----LSKAKEIGADLVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHH----HHHHHHTTCSEEEECSSCCHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHH----HHHHHHhCCCEEEcCcccccchHHHHHHHHh
Confidence 334688999999999864 667777887754 2389999999843 3344433111222211 00000 000 00
Q ss_pred CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 211 VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
...||+||-....+.. +. .+.++|+++|++++.
T Consensus 240 ~~g~D~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIECTGAEAS---IQ-AGIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEECSCCHHH---HH-HHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCCChHH---HH-HHHHHhcCCCEEEEE
Confidence 1469999977765432 33 566899999999875
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.37 E-value=0.025 Score=52.12 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=60.3
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeE
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
...++++++||-+|+|+ |..+..+|+..+ .+|+++|.++...+.+.+ ..--.++ |..+..........+|+
T Consensus 189 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~----lGa~~vi--~~~~~~~~~~~~~g~Dv 260 (369)
T 1uuf_A 189 HWQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA----LGADEVV--NSRNADEMAAHLKSFDF 260 (369)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSEEE--ETTCHHHHHTTTTCEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcEEe--ccccHHHHHHhhcCCCE
Confidence 34678999999999864 667777777754 479999999854433322 1111122 22221111111257999
Q ss_pred EEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 217 IFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 217 V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
||-....+.. +. .+.+.|+++|+++..
T Consensus 261 vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTVAAPHN---LD-DFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECCSSCCC---HH-HHHTTEEEEEEEEEC
T ss_pred EEECCCCHHH---HH-HHHHHhccCCEEEEe
Confidence 9976665432 22 556899999998874
No 328
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.30 E-value=0.11 Score=40.56 Aligned_cols=97 Identities=10% Similarity=0.111 Sum_probs=64.9
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~ 221 (305)
..+|+=+|| |.+...+++.+. ....|+++|.++.. ++.+++ ..+.++..|+++...... ....+|+|++..
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~----~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTR----VDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHH----HHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 357877776 667777777653 23479999999944 333333 467889999987653321 235799999888
Q ss_pred CChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.......+. ...+.+.|..+++...
T Consensus 80 ~~~~~n~~~~-~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 80 PNGYEAGEIV-ASARAKNPDIEIIARA 105 (140)
T ss_dssp SCHHHHHHHH-HHHHHHCSSSEEEEEE
T ss_pred CChHHHHHHH-HHHHHHCCCCeEEEEE
Confidence 8776665555 4556677777766554
No 329
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.20 E-value=0.12 Score=55.22 Aligned_cols=147 Identities=13% Similarity=0.121 Sum_probs=87.7
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCc------------cccc-C
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPA------------KYRM-L 210 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~------------~~~~-~ 210 (305)
..++|||+||.|.++.-+... +-.-.|.++|+++.+......+ .++..++..|+.... .... .
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N---~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLN---NPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHH---CTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHh---CCCCcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 468999999999999988765 2112588999999543332222 245566666653221 0000 1
Q ss_pred CCcEeEEEEeCCChh--------------HHH-H---HHHHHhccCCCCcEEEEEEcccccCCCCchhhhHHHHHHHHHH
Q 021911 211 VGMVDVIFSDVAQPD--------------QAR-I---LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQ 272 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~--------------~~~-~---l~~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~~~~~~l~~ 272 (305)
...+|+|+.-+||.. ... + +. .+...++|- +|++.-... +.+. ....+|...+..|.+
T Consensus 927 ~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~l-riv~~~rPk-~fv~ENV~g-lls~-~~g~~~~~il~~L~~ 1002 (1330)
T 3av4_A 927 KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL-SYCDYYRPR-FFLLENVRN-FVSY-RRSMVLKLTLRCLVR 1002 (1330)
T ss_dssp TTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHH-HHHHHHCCS-EEEEEEEGG-GGTT-TTTHHHHHHHHHHHH
T ss_pred cCccceEEecCCCcccccccccccccccchhhHHHHHHH-HHHHHhcCc-EEEEeccHH-Hhcc-CccHHHHHHHHHHHh
Confidence 247899999888531 111 1 22 345567896 444442111 2111 123456666788888
Q ss_pred CCCcEeEEe-ec----CCCCCceEEEEEEEc
Q 021911 273 DQFKPFEQV-TL----EPFERDHACVVGGYR 298 (305)
Q Consensus 273 ~Gf~~~e~~-~l----~p~~~~~~~vv~~~~ 298 (305)
.||.+...+ .. -|..|..+++||...
T Consensus 1003 lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~ 1033 (1330)
T 3av4_A 1003 MGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1033 (1330)
T ss_dssp HTCEEEEEEEEGGGGSCSBCCEEEEEEEECT
T ss_pred cCCeeeEEEecHHHcCCCccccEEEEEEecC
Confidence 899876543 22 567889999999754
No 330
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.11 E-value=0.029 Score=49.13 Aligned_cols=76 Identities=9% Similarity=-0.147 Sum_probs=47.6
Q ss_pred eEEEEccCCCCcccccCCCcEeEEEEeCCCh-----------------hHHHHHHHHHhccCCCCcEEEEEEcccccCCC
Q 021911 194 VIPIIEDARHPAKYRMLVGMVDVIFSDVAQP-----------------DQARILALNASYFLKAGGHFVISIKANCIDST 256 (305)
Q Consensus 194 I~~~~~D~~~~~~~~~~~~~fD~V~~d~~~~-----------------~~~~~l~~~a~~~LkpGG~lv~s~~~~~i~~~ 256 (305)
..+++.|+...... ...++||+|++|+|.. .....+. .+.++|+|+|.+++.+ +.
T Consensus 5 ~~l~~gD~~~~l~~-l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~-~~~~~Lk~~g~i~v~~--~d---- 76 (260)
T 1g60_A 5 NKIHQMNCFDFLDQ-VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWID-KVLDKLDKDGSLYIFN--TP---- 76 (260)
T ss_dssp SSEEECCHHHHHHH-SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHH-HHHHHEEEEEEEEEEE--CH----
T ss_pred CeEEechHHHHHHh-ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHH-HHHHHhcCCeEEEEEc--Cc----
Confidence 34677887554322 2346899999999931 2234444 7889999999999986 11
Q ss_pred CchhhhHHHHHHHHHHCCCcEeEEe
Q 021911 257 VPAEAVFQSEVKKLQQDQFKPFEQV 281 (305)
Q Consensus 257 ~~~~~v~~~~~~~l~~~Gf~~~e~~ 281 (305)
.. ....+..+.+.+|.....+
T Consensus 77 --~~--~~~~~~~~~~~gf~~~~~i 97 (260)
T 1g60_A 77 --FN--CAFICQYLVSKGMIFQNWI 97 (260)
T ss_dssp --HH--HHHHHHHHHHTTCEEEEEE
T ss_pred --HH--HHHHHHHHHhhccceeEEE
Confidence 11 1122345667888876544
No 331
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.11 E-value=0.043 Score=50.53 Aligned_cols=102 Identities=22% Similarity=0.275 Sum_probs=61.6
Q ss_pred cccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-cc----cC
Q 021911 137 DNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-YR----ML 210 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~~----~~ 210 (305)
+...++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++.. ++.+++..--..+..+-.+... .. ..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~----~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATK----RRLAEEVGATATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHH----HHHHHHHTCSEEECTTSSCHHHHHHSTTSSS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHH----HHHHHHcCCCEEECCCCcCHHHHHHhhhhcc
Confidence 334788999999999864 667777777764 2389999999844 3333332111122111111110 00 11
Q ss_pred CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 211 VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.+.||+||-....+.. +. .+.++|+++|++++.
T Consensus 251 ~gg~Dvvid~~G~~~~---~~-~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIECAGVAET---VK-QSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEECSCCHHH---HH-HHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCCHHH---HH-HHHHHhccCCEEEEE
Confidence 2479999976665433 33 566899999999885
No 332
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.99 E-value=0.089 Score=40.44 Aligned_cols=97 Identities=8% Similarity=0.093 Sum_probs=59.4
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccc-cCCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYR-MLVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~-~~~~~fD~V~~d~ 221 (305)
+++|+-+|+ |.....++..+. ....|+.+|.++...+. +.+...+.++..|..+..... .....+|+|++..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~----~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKK----ASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 367887765 778888776652 23479999999844332 222225667778876543321 1135789999988
Q ss_pred CChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.......+. .+.+.+.+. .+++.+
T Consensus 78 ~~~~~~~~~~-~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 78 GKEEVNLMSS-LLAKSYGIN-KTIARI 102 (140)
T ss_dssp SCHHHHHHHH-HHHHHTTCC-CEEEEC
T ss_pred CCchHHHHHH-HHHHHcCCC-EEEEEe
Confidence 7665444444 455557775 555543
No 333
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.96 E-value=0.11 Score=42.44 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=62.7
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC--CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC--CCcEeEEEE
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP--NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML--VGMVDVIFS 219 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~--~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~--~~~fD~V~~ 219 (305)
+++|+-+|+ |.....+++.+.. ...|+++|.++...+ .+++ ..+..+..|..+....... ...+|+|++
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~----~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQ----QHRS-EGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHH----HHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHH----HHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 567888765 6777777765532 347999999984433 3333 2566777888765432222 457899998
Q ss_pred eCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
..+.......+. .+.+.+.|...++..+
T Consensus 112 ~~~~~~~~~~~~-~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 112 AMPHHQGNQTAL-EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCSSHHHHHHHH-HHHHHTTCCSEEEEEE
T ss_pred eCCChHHHHHHH-HHHHHHCCCCEEEEEE
Confidence 777665555554 4555677777777665
No 334
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.90 E-value=0.088 Score=47.88 Aligned_cols=100 Identities=16% Similarity=0.244 Sum_probs=60.2
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccC-CCCc-ccc-cC---
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDA-RHPA-KYR-ML--- 210 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~-~~~~-~~~-~~--- 210 (305)
...++++++||-+|+|. |..+..+|+..+ .+|+++|.++.. ++.+++..--..+..+- .+.. ... ..
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~----~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRR----LEVAKNCGADVTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHH----HHHHHHTTCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHH----HHHHHHhCCCEEEcCcccccHHHHHHHHhccc
Confidence 34688999999999754 556777777754 469999999844 33343331112222110 1111 110 01
Q ss_pred -CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 211 -VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 211 -~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
...+|+||-....+.. +. .+.++|+++|++++.
T Consensus 237 ~g~g~D~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 237 IGDLPNVTIDCSGNEKC---IT-IGINITRTGGTLMLV 270 (352)
T ss_dssp SSSCCSEEEECSCCHHH---HH-HHHHHSCTTCEEEEC
T ss_pred cCCCCCEEEECCCCHHH---HH-HHHHHHhcCCEEEEE
Confidence 2469999977765432 33 566899999999875
No 335
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.80 E-value=0.045 Score=49.66 Aligned_cols=98 Identities=17% Similarity=0.261 Sum_probs=61.8
Q ss_pred CCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-cc--cCCCcEe
Q 021911 140 WIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-YR--MLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~~--~~~~~fD 215 (305)
.++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++.. ++.+++..--..+..+- +... .. .....+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~----~~~~~~lGa~~~i~~~~-~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDR----LALAREVGADAAVKSGA-GAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHH----HHHHHHTTCSEEEECST-THHHHHHHHHGGGCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHH----HHHHHHcCCCEEEcCCC-cHHHHHHHHhCCCCCe
Confidence 578899999999864 667778887763 3589999999843 34444432112222211 1111 00 0123799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||-....+.. +. .+.++|+++|++++.
T Consensus 242 ~v~d~~G~~~~---~~-~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 242 AVFDFVGAQST---ID-TAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEESSCCHHH---HH-HHHHHEEEEEEEEEC
T ss_pred EEEECCCCHHH---HH-HHHHHHhcCCEEEEE
Confidence 99987776532 33 666899999999875
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.76 E-value=0.036 Score=50.71 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=64.5
Q ss_pred ccccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc------cc
Q 021911 136 VDNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK------YR 208 (305)
Q Consensus 136 l~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~------~~ 208 (305)
|+...++++++||-+|+|+ |..+..+|+..+. ..|+++|.++...+.+.+. . +.+.....|...... ..
T Consensus 172 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 172 LQRAGVRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI-C--PEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh-c--hhcccccccccchHHHHHHHHHH
Confidence 3444788999999999864 6677788877642 2499999998655444443 2 223222222111110 00
Q ss_pred cCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 209 MLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 209 ~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.....+|+||-....+.. +. .+.++|+++|++++.-
T Consensus 248 t~g~g~Dvvid~~g~~~~---~~-~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVALECTGVESS---IA-AAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEEECSCCHHH---HH-HHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEEECCCChHH---HH-HHHHHhcCCCEEEEEc
Confidence 112479999977765532 33 5668999999998853
No 337
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.68 E-value=0.014 Score=54.28 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=62.8
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC-Ccc-cc--cCCCc
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH-PAK-YR--MLVGM 213 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~-~~~-~~--~~~~~ 213 (305)
..++++++||-+|||+ |..+..+|+.++ ...|+++|.++.. ++.+++. .+..+..+-.+ +.. .. .....
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~----~~~a~~l-Ga~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPAR----LAHAKAQ-GFEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHH----HHHHHHT-TCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHH----HHHHHHc-CCcEEccCCcchHHHHHHHHhCCCC
Confidence 4678999999999865 667788888764 2379999999843 4444443 22333221111 110 00 01236
Q ss_pred EeEEEEeCCChh------------HHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPD------------QARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~------------~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+||-....+. ....+. .+.++|+++|++++.
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLN-SLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHH-HHHHHEEEEEEEEEC
T ss_pred CCEEEECCCCcccccccccccccchHHHHH-HHHHHHhcCCEEEEe
Confidence 999997665331 223455 777899999999775
No 338
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.44 E-value=0.088 Score=41.90 Aligned_cols=100 Identities=9% Similarity=0.169 Sum_probs=61.1
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-CCcEeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-VGMVDVIFS 219 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-~~~fD~V~~ 219 (305)
.++++|+-+|| |.+...++..+. ....|+.+|.++.. ++.++....+.++..|..+....... ...+|+|++
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~----~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYA----FHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGG----GGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHH----HHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 45789999886 677777766542 23489999999833 22332123466677777654322111 347899999
Q ss_pred eCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 220 DVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 220 d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
..+.+.....+. .+.+.+.+...++...
T Consensus 91 ~~~~~~~~~~~~-~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 91 FTNDDSTNFFIS-MNARYMFNVENVIARV 118 (155)
T ss_dssp CSSCHHHHHHHH-HHHHHTSCCSEEEEEC
T ss_pred EeCCcHHHHHHH-HHHHHHCCCCeEEEEE
Confidence 888766555555 4555555655555554
No 339
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.39 E-value=0.14 Score=38.07 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=54.4
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC-C-cEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP-N-GVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~-~-~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
.++|+-+|+ |.....++..+.. . .+|+++|.++..... +. ...+.++..|+.+..........+|+|+...
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~----~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAV----LN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH----HH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH----HH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 468999988 7777777765422 2 579999999844333 22 3467888889877644322345789999988
Q ss_pred CChhHHHHHH
Q 021911 222 AQPDQARILA 231 (305)
Q Consensus 222 ~~~~~~~~l~ 231 (305)
+......++.
T Consensus 78 ~~~~~~~~~~ 87 (118)
T 3ic5_A 78 PFFLTPIIAK 87 (118)
T ss_dssp CGGGHHHHHH
T ss_pred CchhhHHHHH
Confidence 7655544444
No 340
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.38 E-value=0.082 Score=48.38 Aligned_cols=100 Identities=13% Similarity=0.009 Sum_probs=61.3
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-cc--cCCCc
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-YR--MLVGM 213 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~~--~~~~~ 213 (305)
...++++++||-+|+|+ |..+..+|+..+ .+|+++|.++...+. +++..--..+..+..+... .. .....
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~----~~~lGa~~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDR----AFALGADHGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHH----HHHHTCSEEEETTTSCHHHHHHHHHTTCC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHH----HHHcCCCEEEcCCcccHHHHHHHHhCCCC
Confidence 34678999999999765 667777887764 489999999844333 3322111222222111111 00 11237
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+|+||-...... +. .+.+.|+++|++++.-
T Consensus 258 ~D~vid~~g~~~----~~-~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 258 ADHILEIAGGAG----LG-QSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEEEETTSSC----HH-HHHHHEEEEEEEEEEC
T ss_pred ceEEEECCChHH----HH-HHHHHhhcCCEEEEEe
Confidence 999997776332 33 5667999999998863
No 341
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.33 E-value=0.034 Score=50.69 Aligned_cols=102 Identities=18% Similarity=0.101 Sum_probs=60.7
Q ss_pred cccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---cccCCC
Q 021911 137 DNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---YRMLVG 212 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~~~~~~ 212 (305)
+...++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++... +.+++..--.++..+-.+... ......
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~----~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCC----DIALEYGATDIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHH----HHHHHHTCCEEECGGGSCHHHHHHHHTTTC
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHH----HHHHHhCCceEEcCCCcCHHHHHHHHcCCC
Confidence 344688999999999764 566777777754 23799999998443 333332111222211111111 001123
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.+|+||-....+... . .+.++|+++|++++.
T Consensus 235 g~D~v~d~~g~~~~~---~-~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVIAGGDVHTF---A-QAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEECSSCTTHH---H-HHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCChHHH---H-HHHHHHhcCCEEEEe
Confidence 699999766654432 3 556799999999864
No 342
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=94.31 E-value=0.25 Score=43.80 Aligned_cols=90 Identities=22% Similarity=0.132 Sum_probs=51.2
Q ss_pred EccCCCCcccccCCCcEeEEEEeCC----------ChhHHHHHH---HHHhccCCCCcEEEEEEcccccCCCCchhhhHH
Q 021911 198 IEDARHPAKYRMLVGMVDVIFSDVA----------QPDQARILA---LNASYFLKAGGHFVISIKANCIDSTVPAEAVFQ 264 (305)
Q Consensus 198 ~~D~~~~~~~~~~~~~fD~V~~d~~----------~~~~~~~l~---~~a~~~LkpGG~lv~s~~~~~i~~~~~~~~v~~ 264 (305)
..|+..+.. ...+|+|++|++ |.|+.+++. .-|.++|+|||.|++-... ... ....
T Consensus 195 ~lDfg~p~~----~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg----gaD---r~se 263 (320)
T 2hwk_A 195 RLDLGIPGD----VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG----YAD---RASE 263 (320)
T ss_dssp CGGGCSCTT----SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC----CCS---HHHH
T ss_pred ccccCCccc----cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEec----CCc---ccHH
Confidence 556665542 267999999998 245454443 2478899999999998731 111 1112
Q ss_pred HHHHHHHHCCCcEeEEeec-CCCCCceEEEEEEEcC
Q 021911 265 SEVKKLQQDQFKPFEQVTL-EPFERDHACVVGGYRM 299 (305)
Q Consensus 265 ~~~~~l~~~Gf~~~e~~~l-~p~~~~~~~vv~~~~~ 299 (305)
..+..|++. |+....+.- ..-+....++++.-.+
T Consensus 264 ~lv~~LaR~-F~~Vr~vKP~ASR~StEvf~La~gf~ 298 (320)
T 2hwk_A 264 SIIGAIARQ-FKFSRVCKPKSSLEETEVLFVFIGYD 298 (320)
T ss_dssp HHHHHHHTT-EEEEEEECCTTCCSTTCEEEEEEEEC
T ss_pred HHHHHHHHh-cceeeeeCCCCccccceEEEEEEeec
Confidence 224445444 776665432 1122455556655433
No 343
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.08 E-value=0.042 Score=49.90 Aligned_cols=97 Identities=9% Similarity=-0.009 Sum_probs=58.4
Q ss_pred CCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC-C--cccccCCCcEe
Q 021911 140 WIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH-P--AKYRMLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~-~--~~~~~~~~~fD 215 (305)
.+ ++++||-+|+|+ |..+..+|+...+..+|+++|.|+...+. +++..--.++ |..+ . .........+|
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~----~~~lGa~~vi--~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDF----ALELGADYVS--EMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH----HHHHTCSEEE--CHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH----HHHhCCCEEe--ccccchHHHHHhhcCCCcc
Confidence 56 899999999864 55777788776112579999999854333 3222111112 1111 0 00000123799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||-....+. .+. .+.++|+++|++++.
T Consensus 241 ~vid~~g~~~---~~~-~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 241 IAIDLVGTEE---TTY-NLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEESSCCHH---HHH-HHHHHEEEEEEEEEC
T ss_pred EEEECCCChH---HHH-HHHHHhhcCCEEEEe
Confidence 9998776542 233 566899999998875
No 344
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.93 E-value=0.24 Score=42.12 Aligned_cols=97 Identities=7% Similarity=-0.007 Sum_probs=64.1
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDV 221 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~ 221 (305)
...+|+=+|+ |..+..+++.+...+.|+++|.++..+ +.+. .++.++..|+++...... ....+|+|++..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~----~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRK----KVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHH----HHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHH----HHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 4567887776 789999998875443488999998443 3333 468899999987654321 246889999877
Q ss_pred CChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.......+. ...+.+.|.-+++...
T Consensus 80 ~~d~~n~~~~-~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 80 ESDSETIHCI-LGIRKIDESVRIIAEA 105 (234)
T ss_dssp SCHHHHHHHH-HHHHHHCSSSEEEEEC
T ss_pred CCcHHHHHHH-HHHHHHCCCCeEEEEE
Confidence 6654444444 4555677776666654
No 345
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.91 E-value=0.045 Score=50.08 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCC-CCcccccCCCcEeE
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDAR-HPAKYRMLVGMVDV 216 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~-~~~~~~~~~~~fD~ 216 (305)
..++++++||-+|+|+ |..+..+|+..+ .+|+++|.++...+.+.+ ..--..+..+-. +.... ....+|+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~v~~~~~~~~~~~~--~~~~~D~ 246 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADHYIATLEEGDWGEK--YFDTFDL 246 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSEEEEGGGTSCHHHH--SCSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCEEEcCcCchHHHHH--hhcCCCE
Confidence 4678999999999853 556777777765 479999998754333322 111112221111 11111 1257999
Q ss_pred EEEeCCC--hhHHHHHHHHHhccCCCCcEEEEE
Q 021911 217 IFSDVAQ--PDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 217 V~~d~~~--~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
||-.... +.. +. .+.++|+++|+++..
T Consensus 247 vid~~g~~~~~~---~~-~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSLTDID---FN-IMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCSTTCC---TT-TGGGGEEEEEEEEEC
T ss_pred EEECCCCCcHHH---HH-HHHHHhcCCCEEEEe
Confidence 9977665 322 23 566899999998874
No 346
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.84 E-value=0.15 Score=46.68 Aligned_cols=78 Identities=17% Similarity=0.149 Sum_probs=55.7
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ 223 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~ 223 (305)
.++||=+|| |.....+++.+.....|+.+|.+.+. ++.++ +.+..+..|+.+......+...+|+|++..|.
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~----~~~~~--~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNEN----LEKVK--EFATPLKVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHH----HHHHT--TTSEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHH----HHHHh--ccCCcEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence 478999998 78888888877667789999999843 33333 45777888988776544344688999987764
Q ss_pred hhHHHH
Q 021911 224 PDQARI 229 (305)
Q Consensus 224 ~~~~~~ 229 (305)
.....+
T Consensus 88 ~~~~~v 93 (365)
T 3abi_A 88 FLGFKS 93 (365)
T ss_dssp GGHHHH
T ss_pred cccchH
Confidence 433333
No 347
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.78 E-value=0.13 Score=46.62 Aligned_cols=98 Identities=19% Similarity=0.203 Sum_probs=59.8
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccc---ccCCCc
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKY---RMLVGM 213 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~---~~~~~~ 213 (305)
...++++++||-+|+|. |..+..+|...+ .+|+++|.++... +.+++.. ... ..|..+.... ......
T Consensus 159 ~~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~----~~~~~lG-a~~-~~d~~~~~~~~~~~~~~~~ 230 (339)
T 1rjw_A 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKL----ELAKELG-ADL-VVNPLKEDAAKFMKEKVGG 230 (339)
T ss_dssp HHTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHH----HHHHHTT-CSE-EECTTTSCHHHHHHHHHSS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHH----HHHHHCC-CCE-EecCCCccHHHHHHHHhCC
Confidence 34678899999999853 556666666654 4899999998443 3333321 111 1243322110 000147
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+||.....+. .+. .+.++|+++|++++.
T Consensus 231 ~d~vid~~g~~~---~~~-~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 231 VHAAVVTAVSKP---AFQ-SAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEEESSCCHH---HHH-HHHHHEEEEEEEEEC
T ss_pred CCEEEECCCCHH---HHH-HHHHHhhcCCEEEEe
Confidence 999998776543 233 566899999998874
No 348
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.73 E-value=0.19 Score=46.11 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=61.7
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEcc--CCCCcc-c-ccCCC
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIED--ARHPAK-Y-RMLVG 212 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D--~~~~~~-~-~~~~~ 212 (305)
...++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++.. ++.+++..--..+..+ -.+... . .....
T Consensus 188 ~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~----~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKK----YETAKKFGVNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTH----HHHHHTTTCCEEECGGGCSSCHHHHHHHHTTS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHH----HHHHHHcCCcEEEccccCchhHHHHHHHhcCC
Confidence 34678899999999863 667777787764 2379999999843 4445443211222111 111110 0 01123
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCC-cEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAG-GHFVIS 247 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpG-G~lv~s 247 (305)
.+|+||-....+.. +. .+.++|+++ |++++.
T Consensus 263 g~D~vid~~g~~~~---~~-~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 263 GVDYSFECIGNVSV---MR-AALECCHKGWGTSVIV 294 (378)
T ss_dssp CBSEEEECSCCHHH---HH-HHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCCCHHH---HH-HHHHHhhccCCEEEEE
Confidence 79999977765433 33 666899996 998875
No 349
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.72 E-value=0.13 Score=42.52 Aligned_cols=96 Identities=23% Similarity=0.303 Sum_probs=57.8
Q ss_pred CCCCCCEEEEEecC--CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccc----c-cCCC
Q 021911 140 WIKPGARVLYLGAA--SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKY----R-MLVG 212 (305)
Q Consensus 140 ~~~~g~~VLDlG~G--~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~----~-~~~~ 212 (305)
.++++++||..|++ .|..+..++...+ .+|+++|.++.. ++.+++.. ... ..|..+.... . ....
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~----~~~~~~~g-~~~-~~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAK----REMLSRLG-VEY-VGDSRSVDFADEILELTDGY 106 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHH----HHHHHTTC-CSE-EEETTCSTHHHHHHHHTTTC
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHH----HHHHHHcC-CCE-EeeCCcHHHHHHHHHHhCCC
Confidence 67889999999853 3445555555544 589999999843 33343321 111 1243332110 0 0123
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.+|+|+.+... ..+. .+.+.|+++|++++.-
T Consensus 107 ~~D~vi~~~g~----~~~~-~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 107 GVDVVLNSLAG----EAIQ-RGVQILAPGGRFIELG 137 (198)
T ss_dssp CEEEEEECCCT----HHHH-HHHHTEEEEEEEEECS
T ss_pred CCeEEEECCch----HHHH-HHHHHhccCCEEEEEc
Confidence 69999977653 2344 6778999999998753
No 350
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.53 E-value=0.1 Score=47.17 Aligned_cols=53 Identities=21% Similarity=0.091 Sum_probs=38.1
Q ss_pred eEEE-EccCCCCcccccCCCcEeEEEEeCCCh--------------hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 194 VIPI-IEDARHPAKYRMLVGMVDVIFSDVAQP--------------DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 194 I~~~-~~D~~~~~~~~~~~~~fD~V~~d~~~~--------------~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
..++ +.|+...... +...+||+|++|+|.. .....+. .+.++|+|+|.+++.+
T Consensus 39 ~~l~i~gD~l~~L~~-l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~-~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK-LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLA-EAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHT-SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHH-HHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHh-CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHH-HHHHHcCCCeEEEEEc
Confidence 4566 8898654332 2346899999999932 2344555 7889999999999987
No 351
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.50 E-value=0.1 Score=47.22 Aligned_cols=102 Identities=21% Similarity=0.118 Sum_probs=60.1
Q ss_pred cccCCCCCCEEEEEecCCC-ccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---cccCCC
Q 021911 137 DNIWIKPGARVLYLGAASG-TTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---YRMLVG 212 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~G-~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~~~~~~ 212 (305)
....++++++||-+|+|+. ..+..++.... ..+|+++|.++.. ++.+++..--..+...-.++.. ......
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r----~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDK----LNLAKKIGADVTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHH----HHHHHHTTCSEEEEC-CCCHHHHHHHHTTSS
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHH----hhhhhhcCCeEEEeCCCCCHHHHhhhhcCCC
Confidence 3346789999999998764 34455555443 4689999999843 3444443212222211111110 001123
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.+|+++.+...+.. +. .+.+.|+++|++++.
T Consensus 232 g~d~~~~~~~~~~~---~~-~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCAVARIA---FE-QAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECCSCHHH---HH-HHHHTEEEEEEEEEC
T ss_pred CceEEEEeccCcch---hh-eeheeecCCceEEEE
Confidence 68888877766543 33 566899999998875
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.45 E-value=0.097 Score=47.48 Aligned_cols=100 Identities=12% Similarity=0.119 Sum_probs=61.0
Q ss_pred ccccCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccc----c-
Q 021911 136 VDNIWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKY----R- 208 (305)
Q Consensus 136 l~~~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~----~- 208 (305)
|....++++++||-+|+ +.|..+..++...+ .+|+++|.++... +.+++.. ... ..|..+.... .
T Consensus 162 l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~----~~~~~~g-~~~-~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 162 LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKE----ELFRSIG-GEV-FIDFTKEKDIVGAVLK 233 (347)
T ss_dssp HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHH----HHHHHTT-CCE-EEETTTCSCHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHH----HHHHHcC-Cce-EEecCccHhHHHHHHH
Confidence 33346788999999998 34556666666643 4899999887443 2333321 111 1244321110 0
Q ss_pred cCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 209 MLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 209 ~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.....+|+|+.+...+. .+. .+.+.|+++|++++.
T Consensus 234 ~~~~~~D~vi~~~g~~~---~~~-~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 234 ATDGGAHGVINVSVSEA---AIE-ASTRYVRANGTTVLV 268 (347)
T ss_dssp HHTSCEEEEEECSSCHH---HHH-HHTTSEEEEEEEEEC
T ss_pred HhCCCCCEEEECCCcHH---HHH-HHHHHHhcCCEEEEE
Confidence 01126999998877543 334 677899999998875
No 353
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.45 E-value=0.083 Score=47.80 Aligned_cols=57 Identities=19% Similarity=0.127 Sum_probs=40.8
Q ss_pred hhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC
Q 021911 124 FRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR 191 (305)
Q Consensus 124 ~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~ 191 (305)
....|+..++.. ...+++.|||..||+|+++..+... + .+.+++|+++ ...+.++++
T Consensus 237 kp~~l~~~~i~~----~~~~~~~VlDpF~GsGtt~~aa~~~-g--r~~ig~e~~~----~~~~~~~~r 293 (323)
T 1boo_A 237 FPAKLPEFFIRM----LTEPDDLVVDIFGGSNTTGLVAERE-S--RKWISFEMKP----EYVAASAFR 293 (323)
T ss_dssp CCTHHHHHHHHH----HCCTTCEEEETTCTTCHHHHHHHHT-T--CEEEEEESCH----HHHHHHHGG
T ss_pred CCHHHHHHHHHH----hCCCCCEEEECCCCCCHHHHHHHHc-C--CCEEEEeCCH----HHHHHHHHH
Confidence 344566666532 3578999999999999877665554 3 4899999999 555555554
No 354
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.42 E-value=0.16 Score=47.10 Aligned_cols=103 Identities=17% Similarity=0.064 Sum_probs=58.6
Q ss_pred CCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-cc--cCCCcEe
Q 021911 140 WIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-YR--MLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~~--~~~~~fD 215 (305)
.++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++... +.+++..--..+..+-.+... .. .....+|
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~----~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRR----NLAKELGADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHH----HHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHH----HHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 578899999999853 556677777754 23899999998443 333332111222111111110 00 0123699
Q ss_pred EEEEeCCChh-HHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPD-QARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~-~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||-....+. ....+...+.+.++++|++++.
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 9997777662 2222321333566999999885
No 355
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.31 E-value=0.17 Score=46.28 Aligned_cols=100 Identities=15% Similarity=0.083 Sum_probs=59.9
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccC--CCCcc-c-ccCCCc
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDA--RHPAK-Y-RMLVGM 213 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~--~~~~~-~-~~~~~~ 213 (305)
..++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++... +.+++..--..+..+- .+... . ......
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~----~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKF----PKAIELGATECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGH----HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHH----HHHHHcCCcEEEecccccchHHHHHHHHhCCC
Confidence 3678899999999764 556777777764 23799999998443 3333321112221110 11111 0 011237
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCC-cEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAG-GHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpG-G~lv~s 247 (305)
+|+||-....+. .+. .+.++|+++ |++++.
T Consensus 262 ~Dvvid~~g~~~---~~~-~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 262 VDYAVECAGRIE---TMM-NALQSTYCGSGVTVVL 292 (373)
T ss_dssp BSEEEECSCCHH---HHH-HHHHTBCTTTCEEEEC
T ss_pred CCEEEECCCCHH---HHH-HHHHHHhcCCCEEEEE
Confidence 999997666543 233 666899999 998874
No 356
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.22 E-value=0.14 Score=46.35 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=61.1
Q ss_pred cccCCCCCCEEEEEecC--CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c--ccCC
Q 021911 137 DNIWIKPGARVLYLGAA--SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y--RMLV 211 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G--~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~--~~~~ 211 (305)
+...++++++||-+||+ .|..+..+|...+ .+|+++|.++...+.+.+ ...-..+..+-.+... . ....
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMELTNG 211 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHHhCC
Confidence 33468899999999987 5667888888765 489999998854333332 2111122111111111 0 0112
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
..+|+||.....+... .+.++|+++|++++.-
T Consensus 212 ~g~Dvvid~~g~~~~~-----~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 212 IGADAAIDSIGGPDGN-----ELAFSLRPNGHFLTIG 243 (340)
T ss_dssp SCEEEEEESSCHHHHH-----HHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCCChhHH-----HHHHHhcCCCEEEEEe
Confidence 3799999766644322 3347999999998863
No 357
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.03 E-value=0.23 Score=45.49 Aligned_cols=98 Identities=19% Similarity=0.182 Sum_probs=59.5
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC----Ccc-c-ccCC
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH----PAK-Y-RMLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~----~~~-~-~~~~ 211 (305)
..++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++... +.+++..--..+ |..+ ... . ....
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~----~~~~~lGa~~vi--~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKF----EKAKVFGATDFV--NPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGH----HHHHHTTCCEEE--CGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHH----HHHHHhCCceEE--eccccchhHHHHHHHHhC
Confidence 3678899999999754 556777777754 22799999998443 333332111122 2221 111 0 0112
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCC-cEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAG-GHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpG-G~lv~s 247 (305)
..+|+||-....+.. +. .+.++|+++ |++++.
T Consensus 261 ~g~D~vid~~g~~~~---~~-~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLECVGNVGV---MR-NALESCLKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEECSCCHHH---HH-HHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCCHHH---HH-HHHHHhhcCCcEEEEE
Confidence 379999977665432 33 666899999 998875
No 358
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.94 E-value=0.2 Score=45.90 Aligned_cols=98 Identities=18% Similarity=0.206 Sum_probs=59.3
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC----Ccc-c-ccCC
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH----PAK-Y-RMLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~----~~~-~-~~~~ 211 (305)
..++++++||-+|+|. |..+..+|+..+ ..+|+++|.++... +.+++..--..+ |..+ ... . ....
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~----~~~~~lGa~~vi--~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKF----AKAKEVGATECV--NPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGH----HHHHHTTCSEEE--CGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHH----HHHHHhCCceEe--cccccchhHHHHHHHHhC
Confidence 3678899999999754 556677777754 22799999998443 333332111122 2221 110 0 0112
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCC-cEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAG-GHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpG-G~lv~s 247 (305)
..+|+||-....+.. +. .+.++|+++ |++++.
T Consensus 260 ~g~D~vid~~g~~~~---~~-~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFEVIGRLDT---MV-TALSCCQEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEECSCCHHH---HH-HHHHHBCTTTCEEEEC
T ss_pred CCCcEEEECCCCHHH---HH-HHHHHhhcCCcEEEEe
Confidence 379999977665432 33 666899999 998874
No 359
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.93 E-value=0.099 Score=47.72 Aligned_cols=97 Identities=21% Similarity=0.236 Sum_probs=57.3
Q ss_pred cCCC-CCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCe-EEEEccCCCCcccccCCCcEe
Q 021911 139 IWIK-PGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNV-IPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 139 ~~~~-~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI-~~~~~D~~~~~~~~~~~~~fD 215 (305)
..++ ++++||-+|+|+ |..+..+|+..+ .+|+++|.++.. ++.+++.-.. .++ |..+..........+|
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~----~~~~~~~lGa~~vi--~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKK----REEALQDLGADDYV--IGSDQAKMSELADSLD 246 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTH----HHHHHTTSCCSCEE--ETTCHHHHHHSTTTEE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHH----HHHHHHHcCCceee--ccccHHHHHHhcCCCC
Confidence 3566 899999998742 445666777765 489999998743 3333312111 111 2111111111224799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||-....+.. +. .+.++|+++|++++.
T Consensus 247 ~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVIDTVPVHHA---LE-PYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEECCCSCCC---SH-HHHTTEEEEEEEEEC
T ss_pred EEEECCCChHH---HH-HHHHHhccCCEEEEe
Confidence 99976664422 22 455799999999875
No 360
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.82 E-value=0.2 Score=45.86 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC----Ccc-c-ccCC
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH----PAK-Y-RMLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~----~~~-~-~~~~ 211 (305)
..++++++||-+|+|+ |..+..+|+..+ ..+|+++|.++... +.+++..--..+ |..+ ... . ....
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~----~~a~~lGa~~vi--~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKF----PKAKALGATDCL--NPRELDKPVQDVITELTA 263 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGH----HHHHHTTCSEEE--CGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHH----HHHHHhCCcEEE--ccccccchHHHHHHHHhC
Confidence 3678899999999753 556677777754 23799999998443 333332111122 2211 110 0 0012
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCC-cEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAG-GHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpG-G~lv~s 247 (305)
..+|+||-....+. .+. .+.++|+++ |++++.
T Consensus 264 ~g~Dvvid~~G~~~---~~~-~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAGTAQ---TLK-AAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSCCHH---HHH-HHHHTBCTTTCEEEEC
T ss_pred CCccEEEECCCCHH---HHH-HHHHHhhcCCCEEEEE
Confidence 37999997665533 233 666899999 999864
No 361
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.80 E-value=0.098 Score=47.95 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=56.4
Q ss_pred cCCC-CCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH-cCCCeEEEEccCCCCcccccCCCcEe
Q 021911 139 IWIK-PGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK-KRTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 139 ~~~~-~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~-~~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
..+. ++++||-+|+|. |..+..+|...+ .+|++++.++... +.+. +..--..+ |..+..........+|
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~----~~~~~~lGa~~v~--~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKK----EEALKNFGADSFL--VSRDQEQMQAAAGTLD 253 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGH----HHHHHTSCCSEEE--ETTCHHHHHHTTTCEE
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHH----HHHHHhcCCceEE--eccCHHHHHHhhCCCC
Confidence 3566 899999998743 445566666654 4899999988433 2333 22111122 3222211111224799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||.....+.. +. .+.+.|+++|+++..
T Consensus 254 ~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIIDTVSAVHP---LL-PLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEECCSSCCC---SH-HHHHHEEEEEEEEEC
T ss_pred EEEECCCcHHH---HH-HHHHHHhcCCEEEEE
Confidence 99987664421 12 444688999998874
No 362
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.79 E-value=0.31 Score=37.71 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=59.7
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~ 221 (305)
..+|+-+|+ |.+..++++.+.. ...|+++|.++..+ +.+.. ..+.++..|+++...... ....+|+|++..
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~----~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKI----ELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHH----HHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 357888887 6688888876532 34799999998443 33333 357788899987654321 235789999887
Q ss_pred CChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.......+. ...+.+. ..+++...
T Consensus 79 ~~~~~n~~~~-~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 79 SDDEFNLKIL-KALRSVS-DVYAIVRV 103 (141)
T ss_dssp SCHHHHHHHH-HHHHHHC-CCCEEEEE
T ss_pred CCHHHHHHHH-HHHHHhC-CceEEEEE
Confidence 7544333333 3344444 44555443
No 363
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.79 E-value=0.18 Score=46.11 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=59.3
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC----Ccc-c-ccCC
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH----PAK-Y-RMLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~----~~~-~-~~~~ 211 (305)
..++++++||-+|+|. |..+..+|+..+ ..+|+++|.++...+.+ ++..--..+ |..+ ... . ....
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~----~~lGa~~vi--~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARA----KEFGATECI--NPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHH----HHHTCSEEE--CGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHH----HHcCCceEe--ccccccccHHHHHHHHhC
Confidence 3678899999999754 556777777764 22799999998543332 221111122 2211 110 0 0112
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCC-cEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAG-GHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpG-G~lv~s 247 (305)
..+|+||-....+.. +. .+.++|+++ |++++.
T Consensus 259 ~g~D~vid~~g~~~~---~~-~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFECIGNVKV---MR-AALEACHKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEECSCCHHH---HH-HHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCCcHHH---HH-HHHHhhccCCcEEEEE
Confidence 379999977665432 33 666899999 999874
No 364
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.75 E-value=0.23 Score=44.65 Aligned_cols=97 Identities=20% Similarity=0.178 Sum_probs=60.8
Q ss_pred ccCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHH-HcCCCeEEEEccCCCCccc----ccC
Q 021911 138 NIWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMA-KKRTNVIPIIEDARHPAKY----RML 210 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a-~~~~nI~~~~~D~~~~~~~----~~~ 210 (305)
...++++++||-.|| +.|..+..++...+ .+|++++.++.. ++.+ ++..--..+ |..+.... ...
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~----~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEK----CRFLVEELGFDGAI--DYKNEDLAAGLKREC 215 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHH----HHHHHHTTCCSEEE--ETTTSCHHHHHHHHC
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHH----HHHHHHHcCCCEEE--ECCCHHHHHHHHHhc
Confidence 346889999999998 34667777777654 489999999843 3334 332111122 22221110 011
Q ss_pred CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 211 VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
...+|+||.+... ..+. .+.+.|+++|++++.
T Consensus 216 ~~~~d~vi~~~g~----~~~~-~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 216 PKGIDVFFDNVGG----EILD-TVLTRIAFKARIVLC 247 (336)
T ss_dssp TTCEEEEEESSCH----HHHH-HHHTTEEEEEEEEEC
T ss_pred CCCceEEEECCCc----chHH-HHHHHHhhCCEEEEE
Confidence 2479999876663 2444 778999999999875
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.74 E-value=0.17 Score=45.93 Aligned_cols=99 Identities=19% Similarity=0.238 Sum_probs=60.8
Q ss_pred ccCCCCCCEEEEEecC--CCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---c-ccC
Q 021911 138 NIWIKPGARVLYLGAA--SGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---Y-RML 210 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G--~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~-~~~ 210 (305)
...++++++||-+|+| .|..+..++... + .+|+++|.++...+.+ ++...-..+ |..+... . ...
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~~~~~~----~~~g~~~~~--~~~~~~~~~~~~~~~ 236 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEAVEAA----KRAGADYVI--NASMQDPLAEIRRIT 236 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHHHHHH----HHHTCSEEE--ETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHH----HHhCCCEEe--cCCCccHHHHHHHHh
Confidence 3467899999999987 444566666665 4 4899999998543333 221111112 2222111 0 111
Q ss_pred C-CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 211 V-GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 211 ~-~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
. ..+|+||.+...+. .+. .+.++|+++|++++.-
T Consensus 237 ~~~~~d~vi~~~g~~~---~~~-~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 ESKGVDAVIDLNNSEK---TLS-VYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTSCEEEEEESCCCHH---HHT-TGGGGEEEEEEEEECC
T ss_pred cCCCceEEEECCCCHH---HHH-HHHHHHhcCCEEEEEC
Confidence 2 47999998776542 334 6778999999998753
No 366
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.69 E-value=0.28 Score=44.02 Aligned_cols=96 Identities=20% Similarity=0.168 Sum_probs=59.1
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC-Cc--c-c-ccCC
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH-PA--K-Y-RMLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~-~~--~-~-~~~~ 211 (305)
..++++++||-.|| +.|..+..++...+ .+|+++|.++...+ .+++.. .. ...|..+ .. . . ....
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~----~~~~~g-~~-~~~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIA----YLKQIG-FD-AAFNYKTVNSLEEALKKASP 212 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHH----HHHHTT-CS-EEEETTSCSCHHHHHHHHCT
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHH----HHHhcC-Cc-EEEecCCHHHHHHHHHHHhC
Confidence 36788999999997 44556666666543 58999999984433 333221 11 1224433 11 0 0 0012
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
..+|+|+.+...+ .+. .+.+.|+++|++++.
T Consensus 213 ~~~d~vi~~~g~~----~~~-~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDNVGGE----FLN-TVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEESSCHH----HHH-HHHTTEEEEEEEEEC
T ss_pred CCCeEEEECCChH----HHH-HHHHHHhcCCEEEEE
Confidence 4799999877642 344 777899999999875
No 367
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.66 E-value=0.19 Score=42.32 Aligned_cols=95 Identities=16% Similarity=0.055 Sum_probs=60.8
Q ss_pred EEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeCCC
Q 021911 146 RVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDVAQ 223 (305)
Q Consensus 146 ~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~~~ 223 (305)
+|+=+|+ |.++.++++.+. ....|+.+|.++..++. ..+...+.++..|+++...... ....+|+|++..+.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~----l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEE----FAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHH----HHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 4566554 788888887653 23479999999844333 2222367889999987654321 24578999988877
Q ss_pred hhHHHHHHHHHhccCCCCcEEEEE
Q 021911 224 PDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 224 ~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
......+. ...+.+.+.-+++..
T Consensus 76 d~~n~~~~-~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 76 DEVNLFIA-QLVMKDFGVKRVVSL 98 (218)
T ss_dssp HHHHHHHH-HHHHHTSCCCEEEEC
T ss_pred cHHHHHHH-HHHHHHcCCCeEEEE
Confidence 66555555 444445555555543
No 368
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.65 E-value=0.094 Score=46.85 Aligned_cols=93 Identities=25% Similarity=0.281 Sum_probs=58.0
Q ss_pred ccccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcE
Q 021911 136 VDNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 136 l~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
|+...++++++||-+|+|+ |..+..+|+..+ .+|++++ |++..+. +++. ....+.-| ... ....+
T Consensus 135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~----~~~l-Ga~~v~~d---~~~---v~~g~ 200 (315)
T 3goh_A 135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQAL----AAKR-GVRHLYRE---PSQ---VTQKY 200 (315)
T ss_dssp HTTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHH----HHHH-TEEEEESS---GGG---CCSCE
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHH----HHHc-CCCEEEcC---HHH---hCCCc
Confidence 3445788999999999953 667788888865 4899999 8744333 3222 22323223 111 24689
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|+||-....+. +. .+.++|+++|+++..
T Consensus 201 Dvv~d~~g~~~----~~-~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVNSQN----AA-ALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC------------TTGGGEEEEEEEEEE
T ss_pred cEEEECCCchh----HH-HHHHHhcCCCEEEEE
Confidence 99986554332 23 667899999999876
No 369
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.57 E-value=0.14 Score=47.14 Aligned_cols=102 Identities=17% Similarity=0.203 Sum_probs=59.5
Q ss_pred cccC-CCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEcc---CCCCc-ccc-c
Q 021911 137 DNIW-IKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIED---ARHPA-KYR-M 209 (305)
Q Consensus 137 ~~~~-~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D---~~~~~-~~~-~ 209 (305)
.... ++++++||-+|+|. |..+..+|+..+ ..+|+++|.+++. ++.+++..--.++..+ -.++. ... .
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~----~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNR----LKLAEEIGADLTLNRRETSVEERRKAIMDI 262 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHH----HHHHHHTTCSEEEETTTSCHHHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHH----HHHHHHcCCcEEEeccccCcchHHHHHHHH
Confidence 3346 78899999999652 556667777653 2489999999844 3334433111222211 00000 000 0
Q ss_pred C-CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 210 L-VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 210 ~-~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
. ...+|+||-....+.. +. .+.++|+++|++++.
T Consensus 263 ~~g~g~Dvvid~~g~~~~---~~-~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 263 THGRGADFILEATGDSRA---LL-EGSELLRRGGFYSVA 297 (380)
T ss_dssp TTTSCEEEEEECSSCTTH---HH-HHHHHEEEEEEEEEC
T ss_pred hCCCCCcEEEECCCCHHH---HH-HHHHHHhcCCEEEEE
Confidence 1 1369999977765433 23 556799999998875
No 370
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.44 E-value=0.11 Score=46.53 Aligned_cols=95 Identities=20% Similarity=0.196 Sum_probs=56.8
Q ss_pred CCCC--CCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEe
Q 021911 140 WIKP--GARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVD 215 (305)
Q Consensus 140 ~~~~--g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD 215 (305)
.+++ +. ||-.|+ +.|..+..+|+..+ .+|++++.++...+.+.+.-. + ..+-..|..... ......+|
T Consensus 142 ~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~lGa--~-~vi~~~~~~~~~--~~~~~~~d 213 (324)
T 3nx4_A 142 GIRPQDGE-VVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKSLGA--N-RILSRDEFAESR--PLEKQLWA 213 (324)
T ss_dssp TCCGGGCC-EEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTC--S-EEEEGGGSSCCC--SSCCCCEE
T ss_pred ccCCCCCe-EEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhcCC--C-EEEecCCHHHHH--hhcCCCcc
Confidence 4555 45 998886 45678888888865 489999999855433332211 1 111111211111 11235799
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||-....+ .+. .+.+.|+++|+++..
T Consensus 214 ~v~d~~g~~----~~~-~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 214 GAIDTVGDK----VLA-KVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEEESSCHH----HHH-HHHHTEEEEEEEEEC
T ss_pred EEEECCCcH----HHH-HHHHHHhcCCEEEEE
Confidence 988655432 454 778899999999875
No 371
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.27 E-value=0.17 Score=45.83 Aligned_cols=99 Identities=23% Similarity=0.131 Sum_probs=58.2
Q ss_pred cccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCc--c-cc-c-C
Q 021911 137 DNIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPA--K-YR-M-L 210 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~--~-~~-~-~ 210 (305)
....+ ++++||-+|+|. |..+..+|...+ ..+|+++|.++...+ .+++..--..+ |..+.. . .. . .
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~----~~~~~Ga~~~~--~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRE----LAKKVGADYVI--NPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHH----HHHHHTCSEEE--CTTTSCHHHHHHHHTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHH----HHHHhCCCEEE--CCCCcCHHHHHHHHcC
Confidence 33456 899999999843 556666776654 227999999984433 33221111122 222211 1 00 0 1
Q ss_pred CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 211 VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
...+|+||.....+.. +. .+.+.|+++|+++..
T Consensus 234 g~g~D~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 234 GNGVDVFLEFSGAPKA---LE-QGLQAVTPAGRVSLL 266 (348)
T ss_dssp TSCEEEEEECSCCHHH---HH-HHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCCHHH---HH-HHHHHHhcCCEEEEE
Confidence 2369999987765432 33 566899999998875
No 372
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.99 E-value=0.19 Score=45.50 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=41.0
Q ss_pred chhhHHHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCCh---HHHHHHHH
Q 021911 123 PFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSH---RSGRDLVN 186 (305)
Q Consensus 123 ~~~s~l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~---~~~~~l~~ 186 (305)
++...|+..++.. ...+++.|||..||+|+++..+... + .+.+++|+++ ..+.-..+
T Consensus 226 ~kp~~l~~~~i~~----~~~~~~~vlDpF~GsGtt~~aa~~~-~--r~~ig~e~~~~~~~~~~~~~~ 285 (319)
T 1eg2_A 226 QKPAAVIERLVRA----LSHPGSTVLDFFAGSGVTARVAIQE-G--RNSICTDAAPVFKEYYQKQLT 285 (319)
T ss_dssp CCCHHHHHHHHHH----HSCTTCEEEETTCTTCHHHHHHHHH-T--CEEEEEESSTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH----hCCCCCEEEecCCCCCHHHHHHHHc-C--CcEEEEECCccHHHHHHHHHH
Confidence 3455677776642 3578999999999999888776665 3 4899999999 55443333
No 373
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.93 E-value=0.89 Score=39.23 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=54.2
Q ss_pred CCCEEEEEecCCC-ccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCccccc-------CC
Q 021911 143 PGARVLYLGAASG-TTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRM-------LV 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G-~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~-------~~ 211 (305)
.++++|--|++++ .....+|+.+- ...+|+.++.+++..+++.+.+++. .++.++++|+++...... ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4788999997652 35555554431 2458999999987777766666543 478899999988653211 13
Q ss_pred CcEeEEEEeCC
Q 021911 212 GMVDVIFSDVA 222 (305)
Q Consensus 212 ~~fD~V~~d~~ 222 (305)
+.+|+++.+..
T Consensus 85 G~iD~lvnnAg 95 (256)
T 4fs3_A 85 GNIDGVYHSIA 95 (256)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEeccc
Confidence 58999998754
No 374
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.88 E-value=0.42 Score=37.66 Aligned_cols=99 Identities=8% Similarity=0.011 Sum_probs=62.3
Q ss_pred CEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCCh-HHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSH-RSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDV 221 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~-~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~ 221 (305)
.+||=+| .|..+..+++.+. ....|+.+|.++ ...+.+.+.. ...+.++..|+++...... ....+|+|++..
T Consensus 4 ~~vlI~G--~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 4 DHFIVCG--HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp SCEEEEC--CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CcEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh--cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 4577665 4888888887653 234799999974 3222222221 2468899999987654322 246889999887
Q ss_pred CChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.......+. ...+.+.|..+++...
T Consensus 80 ~~d~~n~~~~-~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 80 DNDADNAFVV-LSAKDMSSDVKTVLAV 105 (153)
T ss_dssp SCHHHHHHHH-HHHHHHTSSSCEEEEC
T ss_pred CChHHHHHHH-HHHHHHCCCCEEEEEE
Confidence 7665554444 5555666666666544
No 375
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.55 E-value=0.56 Score=40.13 Aligned_cols=78 Identities=15% Similarity=0.046 Sum_probs=52.4
Q ss_pred CCEEEEEecCCCccHHHHHhhhC--CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG--PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~--~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
+.+||-.| |+|....++++.+- ...+|+.++.++.....+.+..... .++.++.+|+.+....... ...
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 56777666 55677777776542 2458999999876665555554433 5789999999876432211 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+||.++.
T Consensus 83 id~li~~Ag 91 (276)
T 1wma_A 83 LDVLVNNAG 91 (276)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 999998764
No 376
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.50 E-value=0.075 Score=48.22 Aligned_cols=98 Identities=21% Similarity=0.226 Sum_probs=59.7
Q ss_pred ccCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c-ccC-CC
Q 021911 138 NIWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y-RML-VG 212 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~-~~~-~~ 212 (305)
...++++++||-+|| +.|..+..+|...+ .+|++++.++...+.+.+ ...-..+..+ .+... . ... ..
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~~v~~~~-~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS----VGADIVLPLE-EGWAKAVREATGGA 226 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSEEEESS-TTHHHHHHHHTTTS
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcEEecCc-hhHHHHHHHHhCCC
Confidence 346788999999997 34667778887764 489999998854433222 2111222222 11111 0 011 23
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.+|+||-....+ .+. .+.+.|+++|++++.
T Consensus 227 g~Dvvid~~g~~----~~~-~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVDPIGGP----AFD-DAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEESCC------CHH-HHHHTEEEEEEEEEC
T ss_pred CceEEEECCchh----HHH-HHHHhhcCCCEEEEE
Confidence 799999777654 233 667899999999874
No 377
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.49 E-value=0.91 Score=39.41 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=63.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCC------------hHHHHHHHHHHHcC-CCeEEEEccCCCCcccc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFS------------HRSGRDLVNMAKKR-TNVIPIIEDARHPAKYR 208 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s------------~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~ 208 (305)
.+.+||-.|++. ....++++.+ ....+|+.+|.+ .+.+..+.+..... .++.++.+|+++.....
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 467888888665 5666666544 234589999886 54444444433333 67999999998875322
Q ss_pred cC-------CCcEeEEEEeCCC---------hhHHHH----------HHHHHhccCCCCcEEEEEE
Q 021911 209 ML-------VGMVDVIFSDVAQ---------PDQARI----------LALNASYFLKAGGHFVISI 248 (305)
Q Consensus 209 ~~-------~~~fD~V~~d~~~---------~~~~~~----------l~~~a~~~LkpGG~lv~s~ 248 (305)
.. .+.+|+|+.++.. .+..+. +.+.+...|+.+|.+++..
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 11 1478999987651 111111 2224666778888887764
No 378
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.45 E-value=0.17 Score=46.32 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=56.5
Q ss_pred CCCEEEEEe-cC-CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCC-cc-c-ccCCCcEeEE
Q 021911 143 PGARVLYLG-AA-SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHP-AK-Y-RMLVGMVDVI 217 (305)
Q Consensus 143 ~g~~VLDlG-~G-~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~-~~-~-~~~~~~fD~V 217 (305)
++++||-+| +| .|..+..+|+.+. ..+|+++|.++.. ++.+++..--..+ |..+. .. . ......+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~----~~~~~~lGad~vi--~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPET----QEWVKSLGAHHVI--DHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHH----HHHHHHTTCSEEE--CTTSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHH----HHHHHHcCCCEEE--eCCCCHHHHHHHhcCCCceEE
Confidence 789999998 33 3667777787653 3589999999844 3333333111112 22111 10 0 0112479999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|-....+. .+. .+.++|+++|++++.
T Consensus 244 id~~g~~~---~~~-~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 FSTTHTDK---HAA-EIADLIAPQGRFCLI 269 (363)
T ss_dssp EECSCHHH---HHH-HHHHHSCTTCEEEEC
T ss_pred EECCCchh---hHH-HHHHHhcCCCEEEEE
Confidence 87655432 333 666899999999875
No 379
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.35 E-value=0.35 Score=43.54 Aligned_cols=96 Identities=19% Similarity=0.221 Sum_probs=59.5
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH-cCCCeEEEEccCCC---Ccc-cc-cC
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK-KRTNVIPIIEDARH---PAK-YR-ML 210 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~-~~~nI~~~~~D~~~---~~~-~~-~~ 210 (305)
..++++++||-+|| +.|..+..++...+ .+|+++|.++.. ++.++ +...-..+ |..+ ... .. ..
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~----~~~~~~~~g~~~~~--d~~~~~~~~~~~~~~~ 222 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEK----VDLLKTKFGFDDAF--NYKEESDLTAALKRCF 222 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHH----HHHHHHTSCCSEEE--ETTSCSCSHHHHHHHC
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHH----HHHHHHHcCCceEE--ecCCHHHHHHHHHHHh
Confidence 36788999999997 35556666676654 589999999843 33443 22111122 3322 111 00 01
Q ss_pred CCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 211 VGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 211 ~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
...+|+||.+...+ .+. .+.+.|+++|++++.
T Consensus 223 ~~~~d~vi~~~g~~----~~~-~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 223 PNGIDIYFENVGGK----MLD-AVLVNMNMHGRIAVC 254 (345)
T ss_dssp TTCEEEEEESSCHH----HHH-HHHTTEEEEEEEEEC
T ss_pred CCCCcEEEECCCHH----HHH-HHHHHHhcCCEEEEE
Confidence 24699999776542 444 777899999999874
No 380
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.24 E-value=0.43 Score=36.55 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=57.5
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-CCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-VGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-~~~fD~V~~d~ 221 (305)
..+|+-+|+ |.....+++.+.. ...|+.+|.++.. .+.+++ ....++..|..+....... ...+|+|+...
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~----~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEK----VNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHH----HHTTTT-TCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHH-hCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence 356888886 7788888776522 2479999998733 333322 2456677887664332211 35789999888
Q ss_pred CCh-hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQP-DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~-~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.+ .....+. .+.+.+.+. .++...
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 79 GANIQASTLTT-LLLKELDIP-NIWVKA 104 (144)
T ss_dssp CSCHHHHHHHH-HHHHHTTCS-EEEEEC
T ss_pred CCchHHHHHHH-HHHHHcCCC-eEEEEe
Confidence 765 3333333 444556675 655543
No 381
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.12 E-value=0.15 Score=45.14 Aligned_cols=92 Identities=22% Similarity=0.233 Sum_probs=57.7
Q ss_pred CCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC-CcccccCCCcEeEE
Q 021911 141 IKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH-PAKYRMLVGMVDVI 217 (305)
Q Consensus 141 ~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~-~~~~~~~~~~fD~V 217 (305)
++++++||-+|+ +.|..+..+|...+ .+|+++|.++...+. +++..--..+ |..+ ...... ...+|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~----~~~~ga~~~~--~~~~~~~~~~~-~~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLAL----PLALGAEEAA--TYAEVPERAKA-WGGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHH----HHHTTCSEEE--EGGGHHHHHHH-TTSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHH----HHhcCCCEEE--ECCcchhHHHH-hcCceEE
Confidence 788999999997 34667777777754 489999998744332 3322111112 2221 111111 1579999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|. ...+ .+. .+.+.|+++|+++..
T Consensus 194 id-~g~~----~~~-~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 194 LE-VRGK----EVE-ESLGLLAHGGRLVYI 217 (302)
T ss_dssp EE-CSCT----THH-HHHTTEEEEEEEEEC
T ss_pred EE-CCHH----HHH-HHHHhhccCCEEEEE
Confidence 98 6552 344 677899999998874
No 382
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.07 E-value=0.22 Score=44.69 Aligned_cols=98 Identities=17% Similarity=0.104 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c--ccCCCcE
Q 021911 140 WIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y--RMLVGMV 214 (305)
Q Consensus 140 ~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~--~~~~~~f 214 (305)
.++++++||-.|+ +.|..+..++...+ .+|++++.++...+.+ ++...-..+..+-.+... . ......+
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHA----KALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHH----HHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 6788999999884 34667777777765 4899999998544333 222111222211111111 0 0112479
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+||...... .+. .+.+.|+++|++++.-
T Consensus 211 Dvvid~~g~~----~~~-~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQD----TWL-TSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCGG----GHH-HHHTTEEEEEEEEECC
T ss_pred eEEEECCChH----HHH-HHHHHhcCCCEEEEEe
Confidence 9999766642 344 6778999999998863
No 383
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.05 E-value=0.48 Score=43.19 Aligned_cols=98 Identities=18% Similarity=0.151 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c-ccCCCcEe
Q 021911 140 WIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y-RMLVGMVD 215 (305)
Q Consensus 140 ~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~-~~~~~~fD 215 (305)
.++++++||-+|+ +.|..+..+|...+ .+|++++.++... +.+++..--..+..+-.+... . ......+|
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~----~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKS----AFLKSLGCDRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHH----HHHHHTTCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHH----HHHHHcCCcEEEecCChhHHHHHHHhcCCCCC
Confidence 5788999999983 45667777777754 4899999997433 333332111222211111111 0 01124699
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+||..... ..+. .+.+.|+++|++++.-
T Consensus 234 ~vid~~g~----~~~~-~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVGG----AMFD-LAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSCT----HHHH-HHHHHEEEEEEEEECC
T ss_pred EEEECCCH----HHHH-HHHHHHhcCCEEEEEe
Confidence 99977664 2344 6778999999988753
No 384
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.00 E-value=0.24 Score=44.71 Aligned_cols=96 Identities=18% Similarity=0.196 Sum_probs=57.5
Q ss_pred cCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCc--c-cc-cCCCc
Q 021911 139 IWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPA--K-YR-MLVGM 213 (305)
Q Consensus 139 ~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~--~-~~-~~~~~ 213 (305)
..+ ++++||-+|+|. |..+..+|+..+ ..+|+++|.++.. ++.+++. ... ..|..+.. . .. .....
T Consensus 161 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~----~~~~~~l--a~~-v~~~~~~~~~~~~~~~~~~g 231 (343)
T 2dq4_A 161 SGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYR----LAFARPY--ADR-LVNPLEEDLLEVVRRVTGSG 231 (343)
T ss_dssp TCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHH----HGGGTTT--CSE-EECTTTSCHHHHHHHHHSSC
T ss_pred CCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHH----HHHHHHh--HHh-ccCcCccCHHHHHHHhcCCC
Confidence 356 899999999843 556667777654 1279999999833 3333332 111 12322211 0 00 01246
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+||-....+.. +. .+.+.|+++|++++.
T Consensus 232 ~D~vid~~g~~~~---~~-~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 232 VEVLLEFSGNEAA---IH-QGLMALIPGGEARIL 261 (343)
T ss_dssp EEEEEECSCCHHH---HH-HHHHHEEEEEEEEEC
T ss_pred CCEEEECCCCHHH---HH-HHHHHHhcCCEEEEE
Confidence 9999977765432 33 566799999998874
No 385
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.85 E-value=0.29 Score=44.51 Aligned_cols=98 Identities=15% Similarity=0.225 Sum_probs=57.9
Q ss_pred cCCCCC------CEEEEEecCC-CccH-HHHH-hhhCCCcEEEEEeCChH---HHHHHHHHHHcCCCeEEEEccCCCCcc
Q 021911 139 IWIKPG------ARVLYLGAAS-GTTV-SHVS-DIVGPNGVVYAVEFSHR---SGRDLVNMAKKRTNVIPIIEDARHPAK 206 (305)
Q Consensus 139 ~~~~~g------~~VLDlG~G~-G~~t-~~la-~~~~~~~~V~avD~s~~---~~~~l~~~a~~~~nI~~~~~D~~~~~~ 206 (305)
..++++ ++||-+|+|+ |..+ ..+| +..+ ..+|+++|.++. . ++.+++. ....+ |..+.+.
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~~~----~~~~~~l-Ga~~v--~~~~~~~ 233 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPDPT----IDIIEEL-DATYV--DSRQTPV 233 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSCHH----HHHHHHT-TCEEE--ETTTSCG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccHHH----HHHHHHc-CCccc--CCCccCH
Confidence 356788 9999999842 4455 5666 5543 224999999874 3 2333332 23333 4332111
Q ss_pred --cccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 207 --YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 207 --~~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.....+.||+||-....+. .+. .+.++|+++|++++.-
T Consensus 234 ~~i~~~~gg~Dvvid~~g~~~---~~~-~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 234 EDVPDVYEQMDFIYEATGFPK---HAI-QSVQALAPNGVGALLG 273 (357)
T ss_dssp GGHHHHSCCEEEEEECSCCHH---HHH-HHHHHEEEEEEEEECC
T ss_pred HHHHHhCCCCCEEEECCCChH---HHH-HHHHHHhcCCEEEEEe
Confidence 1001237999997666542 233 6668999999998753
No 386
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.78 E-value=1.8 Score=37.10 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=64.2
Q ss_pred CCCEEEEEecCCC-ccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccC-------C
Q 021911 143 PGARVLYLGAASG-TTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRML-------V 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G-~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~-------~ 211 (305)
.+.+||-.|++.+ ....++++.+ ....+|+.++.+++....+.+...+. .++.++.+|+++....... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3678999987632 3555555443 22458999988864444444444433 3799999999887543211 1
Q ss_pred CcEeEEEEeCCC--------------hhHHH-----------HHHHHHhccCCCCcEEEEEE
Q 021911 212 GMVDVIFSDVAQ--------------PDQAR-----------ILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 212 ~~fD~V~~d~~~--------------~~~~~-----------~l~~~a~~~LkpGG~lv~s~ 248 (305)
..+|+|+.++.. .+... .+.+.+...|+++|.+++..
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 478999986541 11111 12225667788888888765
No 387
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.65 E-value=0.32 Score=43.70 Aligned_cols=97 Identities=22% Similarity=0.179 Sum_probs=59.2
Q ss_pred CCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c--ccCCCcE
Q 021911 140 WIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y--RMLVGMV 214 (305)
Q Consensus 140 ~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~--~~~~~~f 214 (305)
.++++++||-+|+ +.|..+..++...+ .+|++++.++... +.+++...-..+..+-.+... . ......+
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~----~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKL----KIAKEYGAEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHH----HHHHHTTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHH----HHHHHcCCcEEEeCCCchHHHHHHHHhCCCCc
Confidence 6788999999985 34566777777754 5899999988443 333333211222221111111 0 0012479
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|+||.+.... .+. .+.++|+++|++++.
T Consensus 219 D~vid~~g~~----~~~-~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 219 DASFDSVGKD----TFE-ISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEECCGGG----GHH-HHHHHEEEEEEEEEC
T ss_pred eEEEECCChH----HHH-HHHHHhccCCEEEEE
Confidence 9999776642 333 666799999999885
No 388
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=90.54 E-value=9.1 Score=34.48 Aligned_cols=104 Identities=10% Similarity=0.126 Sum_probs=64.2
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHc-----------------------CCCeEEEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKK-----------------------RTNVIPII 198 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~-----------------------~~nI~~~~ 198 (305)
.+...|+.||||.-+....+.... +...++-||+ |..+..-.+...+ ..+..++-
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 456899999999999999988763 3557777777 4333222222221 25788999
Q ss_pred ccCCCCccc----cc--CCCcEeEEEEeCC----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 199 EDARHPAKY----RM--LVGMVDVIFSDVA----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 199 ~D~~~~~~~----~~--~~~~fD~V~~d~~----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+|+++.... .. ......++++... .+++...+...+...+ |+|.+++..
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 999885321 11 1235667777554 4555554443666655 677775443
No 389
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.30 E-value=0.32 Score=43.53 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=56.3
Q ss_pred CCCCCC-EEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCC--cc-cccCCCc
Q 021911 140 WIKPGA-RVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHP--AK-YRMLVGM 213 (305)
Q Consensus 140 ~~~~g~-~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~--~~-~~~~~~~ 213 (305)
.+++++ +||-+|+ +.|..+..+|+..+ .+|++++.++...+. +++..--..+ |..+. .. .......
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~----~~~lGa~~~i--~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDY----LRVLGAKEVL--AREDVMAERIRPLDKQR 216 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHH----HHHTTCSEEE--ECC---------CCSCC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHH----HHHcCCcEEE--ecCCcHHHHHHHhcCCc
Confidence 567775 8999997 45667778887764 479999998743332 3322111111 11111 00 0011247
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+||-....+. +. .+.+.|+++|++++.
T Consensus 217 ~d~vid~~g~~~----~~-~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 217 WAAAVDPVGGRT----LA-TVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEEECSTTTT----HH-HHHHTEEEEEEEEEC
T ss_pred ccEEEECCcHHH----HH-HHHHhhccCCEEEEE
Confidence 999997666532 33 666799999999875
No 390
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.29 E-value=0.92 Score=40.72 Aligned_cols=96 Identities=7% Similarity=-0.006 Sum_probs=64.5
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeCC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDVA 222 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~~ 222 (305)
..+|+=+|+ |..+..+++.+...+.|+.+|.++..++ ++. .++.++++|+++...... ....+|.|++..+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-----~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-----VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-----HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-----HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 346777664 8899999987744334889999985433 222 478899999988764422 2568999998776
Q ss_pred ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 223 QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 223 ~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
......... ...+.+.|.-+++...
T Consensus 187 ~d~~n~~~~-~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 187 SDSETIHCI-LGIRKIDESVRIIAEA 211 (336)
T ss_dssp SHHHHHHHH-HHHHTTCTTSEEEEEC
T ss_pred ccHHHHHHH-HHHHHHCCCCeEEEEE
Confidence 554333333 5666778876766654
No 391
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=90.27 E-value=0.19 Score=40.53 Aligned_cols=99 Identities=22% Similarity=0.260 Sum_probs=62.2
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccc--cCCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYR--MLVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~--~~~~~fD~V~~d~ 221 (305)
..-|||+|-|+|.+-.||.+.+ |...|+++|-.-..--+ ...+.-.+++.|+.+..+.. ......-++.+|.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~hp~-----~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~ 114 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHV-QGREIYVFERAVASHPD-----STPPEAQLILGDIRETLPATLERFGATASLVHADL 114 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCCCGG-----GCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CCceEEecCCCChhHHHHHHhC-CCCcEEEEEeeeccCCC-----CCCchHheecccHHHHHHHHHHhcCCceEEEEeec
Confidence 4679999999999999999998 67799999953100000 00123346777775543221 1234556666666
Q ss_pred CChh------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPD------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
-..+ ....+..-+..+|.|||.++-..
T Consensus 115 G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 115 GGHNREKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 6321 23334445778999999887664
No 392
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.22 E-value=1.2 Score=39.13 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=52.1
Q ss_pred CCCEEEEEecCC-CccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAAS-GTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~-G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|++. .....++++.+ ....+|+.++.++.....+.+.......+.++.+|+++....... ...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999764 35666666544 234589999998754444444444445678999999887532211 147
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+++.++.
T Consensus 109 iD~lVnnAG 117 (296)
T 3k31_A 109 LDFVVHAVA 117 (296)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998764
No 393
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.22 E-value=0.63 Score=41.17 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=54.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|+.. ....++++.+ ....+|+.++.++..+.++.+..... .++.++.+|+++....... ...
T Consensus 30 ~gk~vlVTGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 30 DGRAAVVTGGAS-GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 467888888764 5666666554 23458999999987776666655543 5799999999887532211 147
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+||.++.
T Consensus 109 id~lvnnAg 117 (301)
T 3tjr_A 109 VDVVFSNAG 117 (301)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998765
No 394
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.17 E-value=0.82 Score=39.32 Aligned_cols=103 Identities=11% Similarity=0.139 Sum_probs=64.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CCCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LVGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~~~f 214 (305)
.+++||-.|++. ....++++.+ ....+|+.++.++..++++.+... .++.++.+|+++...... ....+
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 467888888654 5666666554 234589999999866555544432 478999999988753211 12479
Q ss_pred eEEEEeCCC----------hh-HHHH----------HHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQ----------PD-QARI----------LALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~----------~~-~~~~----------l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.++.. ++ ..+. +.+.+...++++|.+++..
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999987641 11 1111 2224556677788887764
No 395
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.16 E-value=1.2 Score=39.05 Aligned_cols=104 Identities=16% Similarity=0.222 Sum_probs=62.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHH-HHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSG-RDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~-~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++. ....++++.+- ...+|+.++.++... ..+.+..+.. .++.++.+|+.+....... .+
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 367888888654 56666665542 345899999876432 2233333332 5789999999886532111 24
Q ss_pred cEeEEEEeCCC-----------hh------------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVAQ-----------PD------------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~~-----------~~------------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.+|+++.++.. .+ ...++. .+...|+.+|.+++..
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~-~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTK-AALSHLKQGDVIINTA 182 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHH-HHHTTCCTTCEEEEEC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH-HHHHHHhhCCEEEEEe
Confidence 78999987541 11 112222 5667788888887764
No 396
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.11 E-value=0.35 Score=43.29 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=58.0
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---cc--cCC
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---YR--MLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~~--~~~ 211 (305)
..++++++||-.|+ +.|..+..++...+ .+|+++|.++...+.+.+. . .. .. .|..+... .. ...
T Consensus 136 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~~-g--~~-~~--~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQKAQSALKA-G--AW-QV--INYREEDLVERLKEITGG 207 (327)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHHH-T--CS-EE--EETTTSCHHHHHHHHTTT
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHc-C--CC-EE--EECCCccHHHHHHHHhCC
Confidence 36788999999984 34556666666654 4899999998543333221 1 11 11 23322211 00 012
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
..+|+||.+.. .. .+. .+.++|+++|++++.
T Consensus 208 ~~~D~vi~~~g-~~---~~~-~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 208 KKVRVVYDSVG-RD---TWE-RSLDCLQRRGLMVSF 238 (327)
T ss_dssp CCEEEEEECSC-GG---GHH-HHHHTEEEEEEEEEC
T ss_pred CCceEEEECCc-hH---HHH-HHHHHhcCCCEEEEE
Confidence 36999998776 32 233 666899999998875
No 397
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.08 E-value=0.67 Score=43.02 Aligned_cols=53 Identities=15% Similarity=0.036 Sum_probs=35.1
Q ss_pred HHHHHHccccccCCCCCCEEEEEecCCCccHHHHHhhhC------CCcEEEEEeCChHH
Q 021911 128 LAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVG------PNGVVYAVEFSHRS 180 (305)
Q Consensus 128 l~a~ll~~l~~~~~~~g~~VLDlG~G~G~~t~~la~~~~------~~~~V~avD~s~~~ 180 (305)
++..++..++.+.....-.|+|+|+|.|++...+.+.+. ...+++.||+|+..
T Consensus 65 la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~L 123 (387)
T 1zkd_A 65 LGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVL 123 (387)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHH
T ss_pred HHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHH
Confidence 333444333333333345899999999999998876542 23489999999933
No 398
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.97 E-value=0.47 Score=44.42 Aligned_cols=97 Identities=11% Similarity=0.095 Sum_probs=67.0
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-CCCcEeEEEEeC
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-LVGMVDVIFSDV 221 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-~~~~fD~V~~d~ 221 (305)
.++|+-+|+ |.+...+++.+. ....|++||.++.. ++.+++ ..+.++.+|+++...... -...+|+|++..
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~----v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDH----IETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHH----HHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence 356777665 778888887653 23579999999944 444443 356788999988764422 246899999988
Q ss_pred CChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 222 AQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.......+. ...+.+.|.-.++.-.
T Consensus 77 ~~~~~n~~i~-~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 77 DDPQTNLQLT-EMVKEHFPHLQIIARA 102 (413)
T ss_dssp SSHHHHHHHH-HHHHHHCTTCEEEEEE
T ss_pred CChHHHHHHH-HHHHHhCCCCeEEEEE
Confidence 8766665555 6667778887777654
No 399
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.85 E-value=0.55 Score=39.13 Aligned_cols=75 Identities=13% Similarity=0.134 Sum_probs=51.2
Q ss_pred EEEEEecCCCccHHHHHhhhC--CCcEEEEEeCChH-HHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 146 RVLYLGAASGTTVSHVSDIVG--PNGVVYAVEFSHR-SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 146 ~VLDlG~G~G~~t~~la~~~~--~~~~V~avD~s~~-~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
+||-.| ++|....++++.+- ...+|++++.++. .+.++. ....++.++..|+++..........+|+||.+..
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 477777 56777777776543 4568999999874 322221 2346899999999887544333457899999887
Q ss_pred Ch
Q 021911 223 QP 224 (305)
Q Consensus 223 ~~ 224 (305)
..
T Consensus 83 ~~ 84 (221)
T 3r6d_A 83 ES 84 (221)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 400
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.76 E-value=0.65 Score=41.83 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=58.9
Q ss_pred CCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCc--c-cc-cC-CC
Q 021911 140 WIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPA--K-YR-ML-VG 212 (305)
Q Consensus 140 ~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~--~-~~-~~-~~ 212 (305)
.++++++||-+|+ +.|..+..++...+ .+|+++|.++...+.+.+. . .. .. .|..+.. . .. .. ..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~~-g--a~-~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAKAL-G--AD-ET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHH-T--CS-EE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhc-C--CC-EE--EcCCcccHHHHHHHHhCCC
Confidence 6788999999998 45667777777654 4899999998554433221 1 11 11 2332221 0 00 01 23
Q ss_pred cEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 213 MVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 213 ~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.+|+||.... .. .+. .+.+.|+++|++++.
T Consensus 235 ~~d~vi~~~g-~~---~~~-~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVDHTG-AL---YFE-GVIKATANGGRIAIA 264 (343)
T ss_dssp CEEEEEESSC-SS---SHH-HHHHHEEEEEEEEES
T ss_pred CceEEEECCC-HH---HHH-HHHHhhccCCEEEEE
Confidence 7999998776 32 233 566789999998874
No 401
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.46 E-value=0.6 Score=41.85 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=58.1
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---cc--cCC
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---YR--MLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~~--~~~ 211 (305)
..++++++||-.|+ +.|..+..++...+ .+|+++|.++...+.+.+. . .. .. .|..+... .. ...
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~~-g--~~-~~--~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARKL-G--CH-HT--INYSTQDFAEVVREITGG 212 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHH-T--CS-EE--EETTTSCHHHHHHHHHTT
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHc-C--CC-EE--EECCCHHHHHHHHHHhCC
Confidence 36788999999986 44556666666643 5899999998544333221 1 11 11 23322211 00 012
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
..+|+||.+.... .+. .+.++|+++|+++..
T Consensus 213 ~~~d~vi~~~g~~----~~~-~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 213 KGVDVVYDSIGKD----TLQ-KSLDCLRPRGMCAAY 243 (333)
T ss_dssp CCEEEEEECSCTT----THH-HHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCcHH----HHH-HHHHhhccCCEEEEE
Confidence 3699999877652 233 666899999998875
No 402
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.45 E-value=0.61 Score=42.30 Aligned_cols=98 Identities=20% Similarity=0.133 Sum_probs=58.8
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c-ccCCCcE
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y-RMLVGMV 214 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~-~~~~~~f 214 (305)
..++++++||-+|+ +.|..+..+|...+ .+|+++|.++...+.+.+ ...-..+..+-.+... . ......+
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHHSSCE
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHhCCCc
Confidence 46789999999853 34667777777754 489999999855433322 2111122211111111 0 0013479
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|+||.....+ .+. .+.+.|+++|++++.
T Consensus 237 Dvvid~~g~~----~~~-~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 237 DIILDMIGAA----YFE-RNIASLAKDGCLSII 264 (353)
T ss_dssp EEEEESCCGG----GHH-HHHHTEEEEEEEEEC
T ss_pred eEEEECCCHH----HHH-HHHHHhccCCEEEEE
Confidence 9999777654 233 566799999998875
No 403
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.40 E-value=1.9 Score=38.50 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=60.9
Q ss_pred ccCCCCCCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccc---ccCCCc
Q 021911 138 NIWIKPGARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKY---RMLVGM 213 (305)
Q Consensus 138 ~~~~~~g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~---~~~~~~ 213 (305)
...++++++||-.|+|. |..+..+|+..+ ...++++|.+++ -++.+++.--...+..+-.+.... ......
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~----k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSE----KLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHH----HHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHH----HHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence 34678899999998864 445666677654 346789999983 344555442223332221111110 011246
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+|+.....+... . .+.++|+++|++++.
T Consensus 230 ~d~v~d~~G~~~~~---~-~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 230 NQLILETAGVPQTV---E-LAVEIAGPHAQLALV 259 (346)
T ss_dssp SEEEEECSCSHHHH---H-HHHHHCCTTCEEEEC
T ss_pred cccccccccccchh---h-hhhheecCCeEEEEE
Confidence 88888766655433 3 556799999999875
No 404
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.14 E-value=0.25 Score=44.76 Aligned_cols=97 Identities=22% Similarity=0.329 Sum_probs=59.2
Q ss_pred cccCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccc---ccCC
Q 021911 137 DNIWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKY---RMLV 211 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~---~~~~ 211 (305)
+...++++++||-+|+ +.|..+..+|...+ .+|+++ .++... +.+++. ....+. +..+.... ....
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~----~~~~~l-Ga~~i~-~~~~~~~~~~~~~~~ 214 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDL----EYVRDL-GATPID-ASREPEDYAAEHTAG 214 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHH----HHHHHH-TSEEEE-TTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHH----HHHHHc-CCCEec-cCCCHHHHHHHHhcC
Confidence 3446789999999995 34667777887754 489999 777443 233322 122222 22221110 0112
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
..+|+||-....+ .+. .+.+.|+++|++++.
T Consensus 215 ~g~D~vid~~g~~----~~~-~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLGGP----VLD-ASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSCTH----HHH-HHHHHEEEEEEEEES
T ss_pred CCceEEEECCCcH----HHH-HHHHHHhcCCeEEEE
Confidence 4799999766642 344 667899999999874
No 405
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.11 E-value=1.5 Score=37.53 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=53.1
Q ss_pred CCCEEEEEec-CCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccC-------C
Q 021911 143 PGARVLYLGA-ASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRML-------V 211 (305)
Q Consensus 143 ~g~~VLDlG~-G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~-------~ 211 (305)
.+.+||-.|+ |.| ...++++.+ ....+|+.++.++....++.+..++. .++.++.+|+++....... .
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 4678888887 344 455555433 23458999999987766666665443 5799999999886532211 1
Q ss_pred CcEeEEEEeCC
Q 021911 212 GMVDVIFSDVA 222 (305)
Q Consensus 212 ~~fD~V~~d~~ 222 (305)
..+|+||.++.
T Consensus 100 g~id~li~~Ag 110 (266)
T 3o38_A 100 GRLDVLVNNAG 110 (266)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47899998765
No 406
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.03 E-value=0.3 Score=43.75 Aligned_cols=96 Identities=20% Similarity=0.132 Sum_probs=57.3
Q ss_pred CCCCCC-EEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEc-cC-CCCcccccCCCcE
Q 021911 140 WIKPGA-RVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIE-DA-RHPAKYRMLVGMV 214 (305)
Q Consensus 140 ~~~~g~-~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~-D~-~~~~~~~~~~~~f 214 (305)
.+++++ +||-+|| +.|..+..+|+..+ .+|++++.++...+.+.+ .-. +. .+.. |. ..... ......+
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~-lGa-~~--v~~~~~~~~~~~~-~~~~~~~ 218 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQ-LGA-SE--VISREDVYDGTLK-ALSKQQW 218 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHH-HTC-SE--EEEHHHHCSSCCC-SSCCCCE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH-cCC-cE--EEECCCchHHHHH-HhhcCCc
Confidence 567775 8999997 35567777787765 479999988644333222 111 11 1111 11 01000 0112469
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|+||-....+ .+. .+.+.|+++|++++.
T Consensus 219 d~vid~~g~~----~~~-~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 219 QGAVDPVGGK----QLA-SLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEESCCTH----HHH-HHHTTEEEEEEEEEC
T ss_pred cEEEECCcHH----HHH-HHHHhhcCCCEEEEE
Confidence 9998766653 344 777899999999875
No 407
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=88.95 E-value=1.3 Score=38.12 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=50.1
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEE-eCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAV-EFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~av-D~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++. ....++++.+- ...+|+.+ +.++.......+..+.. .++.++.+|+++....... .+
T Consensus 7 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGR-DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 357888888665 46666665442 23578877 66665555555444433 5789999999886532211 14
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+++.++.
T Consensus 86 ~id~lv~nAg 95 (259)
T 3edm_A 86 EIHGLVHVAG 95 (259)
T ss_dssp SEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 408
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.95 E-value=1.8 Score=38.06 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=51.0
Q ss_pred CCCEEEEEecCCC-ccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CCCc
Q 021911 143 PGARVLYLGAASG-TTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G-~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~~~ 213 (305)
.+.+||-.|++.+ ....++++.+ ....+|+.++.++...+.+.+......++.++.+|+++...... ..+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4688999998753 3555555443 22357999998864433333333333578899999988753221 1247
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|++|.++.
T Consensus 110 iD~lVnnAG 118 (293)
T 3grk_A 110 LDFLVHAIG 118 (293)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 899998764
No 409
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=88.88 E-value=1.5 Score=37.93 Aligned_cols=71 Identities=11% Similarity=-0.055 Sum_probs=48.6
Q ss_pred EEEEEecCCCccHHHHHhhhCC--CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 146 RVLYLGAASGTTVSHVSDIVGP--NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 146 ~VLDlG~G~G~~t~~la~~~~~--~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
+||-.| ++|....++++.+.. ..+|++++-++.... .. ...+++++..|+.+..........+|+||....
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~----~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVP----DD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC----GG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHH----Hh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 466665 578888888876532 457999988763211 11 125899999999887654434568899998766
No 410
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.73 E-value=1.6 Score=37.39 Aligned_cols=82 Identities=11% Similarity=0.098 Sum_probs=54.7
Q ss_pred CCCCCEEEEEecC-CCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CC
Q 021911 141 IKPGARVLYLGAA-SGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LV 211 (305)
Q Consensus 141 ~~~g~~VLDlG~G-~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~ 211 (305)
..++.+||-.|+. ++....++++.+- ...+|+.++.+.+....+.+..+...++.++.+|+++...... ..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3457899999975 3667777776542 3458999988865444444444545668899999988653221 12
Q ss_pred CcEeEEEEeCC
Q 021911 212 GMVDVIFSDVA 222 (305)
Q Consensus 212 ~~fD~V~~d~~ 222 (305)
..+|+||.++.
T Consensus 91 g~id~lv~nAg 101 (271)
T 3ek2_A 91 DSLDGLVHSIG 101 (271)
T ss_dssp SCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47899998654
No 411
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.68 E-value=0.72 Score=41.84 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=58.4
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---cc--cCC
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---YR--MLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~~--~~~ 211 (305)
..++++++||-.|+ +.|..+..++...+ .+|++++.++...+ .+++...-.. .|..+... .. ...
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~----~~~~~ga~~~--~d~~~~~~~~~~~~~~~~ 237 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQK----IVLQNGAHEV--FNHREVNYIDKIKKYVGE 237 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHH----HHHHTTCSEE--EETTSTTHHHHHHHHHCT
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHH----HHHHcCCCEE--EeCCCchHHHHHHHHcCC
Confidence 36788999999997 34556666666644 58999999984433 3333211112 23322111 00 012
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
..+|+||.+...+ .+. .+.++|+++|++++.
T Consensus 238 ~~~D~vi~~~G~~----~~~-~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 238 KGIDIIIEMLANV----NLS-KDLSLLSHGGRVIVV 268 (351)
T ss_dssp TCEEEEEESCHHH----HHH-HHHHHEEEEEEEEEC
T ss_pred CCcEEEEECCChH----HHH-HHHHhccCCCEEEEE
Confidence 3799999776532 344 677899999999874
No 412
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=88.62 E-value=1.2 Score=39.67 Aligned_cols=78 Identities=18% Similarity=0.131 Sum_probs=52.6
Q ss_pred CCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC------CCeEEEEccCCCCcccccCCCcEeE
Q 021911 144 GARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR------TNVIPIIEDARHPAKYRMLVGMVDV 216 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~------~nI~~~~~D~~~~~~~~~~~~~fD~ 216 (305)
.++||-.| |+|....++++.+ ....+|++++.++......+...... .+++++.+|+.+..........+|+
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 57898877 5788888888765 23358999987532212223333222 5899999999887654434458999
Q ss_pred EEEeCC
Q 021911 217 IFSDVA 222 (305)
Q Consensus 217 V~~d~~ 222 (305)
||..+.
T Consensus 104 Vih~A~ 109 (351)
T 3ruf_A 104 VLHQAA 109 (351)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998765
No 413
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=88.61 E-value=0.86 Score=42.38 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=55.2
Q ss_pred CEEEEEecCCCccHHHHHhhhCCC----cEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCCcccccCCC--cEeE
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPN----GVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHPAKYRMLVG--MVDV 216 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~----~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~~~~~~~~~--~fD~ 216 (305)
.+||-+|| |.....++..+-.. ..|+.+|.++...+.+.+..... .++.++..|+.+......+.. .+|+
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 47888888 57777777655332 28999999987666665554432 368899999987644322222 3899
Q ss_pred EEEeCCChhHHHHHH
Q 021911 217 IFSDVAQPDQARILA 231 (305)
Q Consensus 217 V~~d~~~~~~~~~l~ 231 (305)
|+...+......++.
T Consensus 80 Vin~ag~~~~~~v~~ 94 (405)
T 4ina_A 80 VLNIALPYQDLTIME 94 (405)
T ss_dssp EEECSCGGGHHHHHH
T ss_pred EEECCCcccChHHHH
Confidence 998876444344443
No 414
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=88.35 E-value=1.7 Score=37.66 Aligned_cols=105 Identities=13% Similarity=0.190 Sum_probs=62.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCC-hHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFS-HRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s-~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++. ....++++.+- ...+|+.++.+ ....+.+.+..+.. .++.++.+|+++....... .+
T Consensus 30 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSR-GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467888888765 56666665442 33578888665 34444444444433 5789999999886532211 13
Q ss_pred cEeEEEEeCCC----------hh-HHH----------HHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVAQ----------PD-QAR----------ILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~~----------~~-~~~----------~l~~~a~~~LkpGG~lv~s~ 248 (305)
.+|+++.++.. ++ ..+ .+.+.+...|+++|.+++..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 78999987651 11 111 12224566777888887764
No 415
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.08 E-value=0.24 Score=44.85 Aligned_cols=93 Identities=15% Similarity=0.233 Sum_probs=54.5
Q ss_pred CCCEEEEEe-cC-CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC-Ccc-c-ccCCCcEeEE
Q 021911 143 PGARVLYLG-AA-SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH-PAK-Y-RMLVGMVDVI 217 (305)
Q Consensus 143 ~g~~VLDlG-~G-~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~-~~~-~-~~~~~~fD~V 217 (305)
++++||-+| +| .|..+..+|...+ .+|++++.++...+.+.+.-. + ..+ |..+ ... . ......||+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa--~--~vi--~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKKMGA--D--IVL--NHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHHHTC--S--EEE--CTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhcCC--c--EEE--ECCccHHHHHHHhCCCCccEE
Confidence 899999985 33 3556777777754 489999998854333332111 1 111 2111 110 0 0113479999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|-....+. .+. .+.++|+++|+++..
T Consensus 222 ~d~~g~~~---~~~-~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 222 FCTFNTDM---YYD-DMIQLVKPRGHIATI 247 (346)
T ss_dssp EESSCHHH---HHH-HHHHHEEEEEEEEES
T ss_pred EECCCchH---HHH-HHHHHhccCCEEEEE
Confidence 97655332 233 566899999999764
No 416
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=87.99 E-value=0.96 Score=38.79 Aligned_cols=78 Identities=22% Similarity=0.246 Sum_probs=51.0
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeC-ChHHHHHHHHHHHc-CCCeEEEEccCCCCcccccC-------CCc
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEF-SHRSGRDLVNMAKK-RTNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~-s~~~~~~l~~~a~~-~~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
+++||-.|+ +|....++++.+- ...+|+.++. ++....++.+..+. ..++.++.+|+.+....... ...
T Consensus 21 ~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 21 GKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567887775 5677777776542 2358999988 66555555444433 25788999999876532211 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 100 ~d~vi~~Ag 108 (274)
T 1ja9_A 100 LDFVMSNSG 108 (274)
T ss_dssp EEEEECCCC
T ss_pred CCEEEECCC
Confidence 999997654
No 417
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.85 E-value=4.9 Score=34.43 Aligned_cols=66 Identities=14% Similarity=0.209 Sum_probs=48.8
Q ss_pred CEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
++||=.| + |....++++.+- ...+|++++-++.....+ .. .+++++..|+.++. ...+|+||..++
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~D~~d~~-----~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RA-SGAEPLLWPGEEPS-----LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH----HH-TTEEEEESSSSCCC-----CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH----hh-CCCeEEEecccccc-----cCCCCEEEECCC
Confidence 6899999 4 999999998763 234899999887432222 11 57999999998854 357899998665
No 418
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.58 E-value=0.69 Score=41.86 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=57.9
Q ss_pred cCCCCC--CEEEEEec--CCCccHHHHHhhhCCCc-EEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---c-cc
Q 021911 139 IWIKPG--ARVLYLGA--ASGTTVSHVSDIVGPNG-VVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---Y-RM 209 (305)
Q Consensus 139 ~~~~~g--~~VLDlG~--G~G~~t~~la~~~~~~~-~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~-~~ 209 (305)
..++++ ++||-.|+ +.|..+..++...+ . +|+++|.++... +.+++.-... ...|..+... . ..
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~G--a~~Vi~~~~~~~~~----~~~~~~~g~~-~~~d~~~~~~~~~~~~~ 226 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLG--CSRVVGICGTHEKC----ILLTSELGFD-AAINYKKDNVAEQLRES 226 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTT--CSEEEEEESCHHHH----HHHHHTSCCS-EEEETTTSCHHHHHHHH
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHCC--CCeEEEEeCCHHHH----HHHHHHcCCc-eEEecCchHHHHHHHHh
Confidence 367889 99999997 34445556666543 4 899999997433 3333211111 1123332211 0 00
Q ss_pred CCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 210 LVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 210 ~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
....+|+||.+... ..+. .+.++|+++|++++.
T Consensus 227 ~~~~~d~vi~~~G~----~~~~-~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 227 CPAGVDVYFDNVGG----NISD-TVISQMNENSHIILC 259 (357)
T ss_dssp CTTCEEEEEESCCH----HHHH-HHHHTEEEEEEEEEC
T ss_pred cCCCCCEEEECCCH----HHHH-HHHHHhccCcEEEEE
Confidence 11269999977763 3454 777899999999875
No 419
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=87.58 E-value=1.9 Score=39.63 Aligned_cols=94 Identities=12% Similarity=0.013 Sum_probs=58.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcC----CCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKR----TNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~----~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
.+.+||.++...|.++..++.. .++.+.-|--+.+.+..+++.+ .+|.+... .+ .+...+|+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~-----~~~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TA-----DYPQQPGVVL 105 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS-----CCCSSCSEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc-----ccccCCCEEE
Confidence 4568999999999999988754 3455543433333344444443 12444321 11 2346899999
Q ss_pred EeCCCh-hHHHHHHHHHhccCCCCcEEEEEE
Q 021911 219 SDVAQP-DQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 219 ~d~~~~-~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
...|.. .........+...|+++..+++.-
T Consensus 106 ~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 106 IKVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp EECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred EEcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 988843 233333337889999999997765
No 420
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=87.28 E-value=0.37 Score=43.78 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=57.9
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc---cc--cCC
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK---YR--MLV 211 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~---~~--~~~ 211 (305)
..++++++||-.|+ +.|..+..++...+ .+|+++|.++...+.+.+. . .. .. .|..+... .. ...
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~-g--~~-~~--~~~~~~~~~~~~~~~~~~ 229 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQKKLQMAEKL-G--AA-AG--FNYKKEDFSEATLKFTKG 229 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH-T--CS-EE--EETTTSCHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHc-C--Cc-EE--EecCChHHHHHHHHHhcC
Confidence 36788999999985 34455666666643 5899999998544333211 1 11 11 23222110 00 012
Q ss_pred CcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 212 GMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 212 ~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
..+|+||.+...+. +. .+.+.|+++|++++.-
T Consensus 230 ~~~d~vi~~~G~~~----~~-~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGGSY----WE-KNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCGGG----HH-HHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCchH----HH-HHHHhccCCCEEEEEe
Confidence 36999998776542 33 5567899999998753
No 421
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.27 E-value=2.8 Score=36.77 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CCCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LVGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~~~f 214 (305)
.++.+|--|++.| ....+|..+ ....+|+.+|.++..++++++.. ..++.++++|+++...... ..+.+
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--GGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4678888887765 555555543 23468999999986655554433 2568889999988753221 13589
Q ss_pred eEEEEeCCC----------hh------------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 215 DVIFSDVAQ----------PD------------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 215 D~V~~d~~~----------~~------------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
|+++.++.. ++ ...+. +.+..+|+.+|.++...
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~-~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV-QKALPLLARGSSVVLTG 159 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHH-HHHTTTEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHH-HHHHHHHhhCCeEEEEe
Confidence 999987651 11 11222 24677888888877754
No 422
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.24 E-value=0.33 Score=44.59 Aligned_cols=98 Identities=20% Similarity=0.251 Sum_probs=53.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
++++|+-+|+ |.....+++.+. ...+|+++|.++...+.+.+... ..+. .|.............+|+|+...
T Consensus 165 ~~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g--~~~~---~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG--GRVI---TLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--TSEE---EEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC--ceEE---EecCCHHHHHHHHhCCCEEEECC
Confidence 3589999998 566666655432 22489999999855443332211 1222 22222211111124689999877
Q ss_pred CChh--HHHHHHHHHhccCCCCcEEEEE
Q 021911 222 AQPD--QARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 222 ~~~~--~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+.+. ...++...+.+.+|++|.++..
T Consensus 238 g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp C-------CCSCHHHHTTSCTTCEEEEC
T ss_pred CCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 7543 1122223566788999987754
No 423
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=87.11 E-value=1.7 Score=37.51 Aligned_cols=104 Identities=21% Similarity=0.254 Sum_probs=62.5
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCC-hHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFS-HRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s-~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++. ....++++.+- ...+|+.++.. ....+.+.+..+.. .++.++.+|+++....... .+
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357888888654 56666665542 23578887764 44444444444433 6789999999886532111 14
Q ss_pred cEeEEEEeCCC----------hh------------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 213 MVDVIFSDVAQ----------PD------------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 213 ~fD~V~~d~~~----------~~------------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
.+|+++.++.. ++ ...++. .+...|+++|.+++..
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~-~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAR-EAYRHLTEGGRIVLTS 152 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH-HHHHHCCTTCEEEEEC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH-HHHHHHhcCCeEEEEe
Confidence 78999976651 11 111222 4666777788888765
No 424
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.91 E-value=0.9 Score=39.61 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=53.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|++. ....++++.+ ....+|+.++.++....++.+..... .++.++.+|+++....... .+.
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467888888654 5666666544 23458999999987766666655543 5799999999886532111 247
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 102 id~lv~nAg 110 (279)
T 3sju_A 102 IGILVNSAG 110 (279)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 899998765
No 425
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.88 E-value=1.7 Score=37.78 Aligned_cols=79 Identities=18% Similarity=0.251 Sum_probs=51.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeC-------------ChHHHHHHHHHHHcC-CCeEEEEccCCCCccc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEF-------------SHRSGRDLVNMAKKR-TNVIPIIEDARHPAKY 207 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~-------------s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~ 207 (305)
.+.+||-.|++. ....++++.+ ....+|+.+|. ++..++++.+..... .++.++.+|+++....
T Consensus 14 ~gk~~lVTGas~-gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 14 QGRVAFITGAAR-GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 467888888765 4566666544 23458999987 555555555554443 5789999999886532
Q ss_pred ccC-------CCcEeEEEEeCC
Q 021911 208 RML-------VGMVDVIFSDVA 222 (305)
Q Consensus 208 ~~~-------~~~fD~V~~d~~ 222 (305)
... ...+|+++.++.
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 211 247899998765
No 426
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=86.80 E-value=1.4 Score=38.02 Aligned_cols=79 Identities=11% Similarity=0.114 Sum_probs=50.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCCh---HHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSH---RSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML------- 210 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~---~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~------- 210 (305)
.+.+||-.|++. ....+++..+- ...+|+.++.+. ..++++.+..... .++.++.+|+++.......
T Consensus 10 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 10 KNKVIVIAGGIK-NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457888888664 57777776653 335788887653 2334444444333 5788999999886532211
Q ss_pred CCcEeEEEEeCC
Q 021911 211 VGMVDVIFSDVA 222 (305)
Q Consensus 211 ~~~fD~V~~d~~ 222 (305)
...+|+++.++.
T Consensus 89 ~g~iD~lvnnAg 100 (262)
T 3ksu_A 89 FGKVDIAINTVG 100 (262)
T ss_dssp HCSEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247999998765
No 427
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=86.76 E-value=0.64 Score=38.62 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=50.5
Q ss_pred CEEEEEecCCCccHHHHHhhhCCC-cEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCC-CcccccCCCcEeEEEEeCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPN-GVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARH-PAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~-~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~-~~~~~~~~~~fD~V~~d~~ 222 (305)
++||-.| |+|....++++.+-.. .+|++++-++.. .....+++++.+|+.+ ..........+|+||..+.
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQ-------VPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGG-------SCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred CeEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccc-------hhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 3677776 5788999998876433 589999988732 1112689999999998 5544444567999998776
No 428
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=86.71 E-value=1.8 Score=38.00 Aligned_cols=104 Identities=12% Similarity=0.110 Sum_probs=62.5
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCCh--HHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------C
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSH--RSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------V 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~--~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~ 211 (305)
.+.+||-.|++ +....++++.+- ...+|+.++.+. .....+.+..++. .++.++.+|+.+....... .
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35788888865 556666666542 235788888762 2333333333332 5788999999886432111 2
Q ss_pred CcEeEEEEeCCC-----------hh------------HHHHHHHHHhccCCCCcEEEEEE
Q 021911 212 GMVDVIFSDVAQ-----------PD------------QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 212 ~~fD~V~~d~~~-----------~~------------~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
+.+|+++.+... ++ ...++. .+...|+.+|.+++..
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~-~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQ-EAIPLLPKGASIITTS 185 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHH-HHGGGCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH-HHHHHhhcCCEEEEEC
Confidence 478999986651 01 112222 4667788888888765
No 429
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.70 E-value=1.3 Score=38.34 Aligned_cols=79 Identities=14% Similarity=0.217 Sum_probs=50.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCC------------hHHHHHHHHHHHc-CCCeEEEEccCCCCcccc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFS------------HRSGRDLVNMAKK-RTNVIPIIEDARHPAKYR 208 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s------------~~~~~~l~~~a~~-~~nI~~~~~D~~~~~~~~ 208 (305)
.+.+||-.|+. +....++++.+ ....+|+.+|.+ +..+..+.+.... ..++.++.+|+++.....
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 46788888865 45666666554 234589999976 4444444433332 268999999998875432
Q ss_pred cC-------CCcEeEEEEeCC
Q 021911 209 ML-------VGMVDVIFSDVA 222 (305)
Q Consensus 209 ~~-------~~~fD~V~~d~~ 222 (305)
.. .+.+|+++.++.
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 11 147899998765
No 430
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=86.62 E-value=0.92 Score=40.87 Aligned_cols=78 Identities=14% Similarity=0.119 Sum_probs=54.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCC--Cc-EEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGP--NG-VVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~--~~-~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~ 219 (305)
.+++||-.| |+|....++++.+-. .. +|++++.++.....+.+... ..++.++.+|+++..........+|+||.
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-DPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-CTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 357888776 578888888876532 23 89999998755444443332 25799999999887644333457899998
Q ss_pred eCC
Q 021911 220 DVA 222 (305)
Q Consensus 220 d~~ 222 (305)
.+.
T Consensus 98 ~Aa 100 (344)
T 2gn4_A 98 AAA 100 (344)
T ss_dssp CCC
T ss_pred CCC
Confidence 776
No 431
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=86.55 E-value=1 Score=42.41 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=58.4
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCC------------
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHP------------ 204 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~------------ 204 (305)
..++++++||-+|+ +.|..+..+|...+ .+|++++.++...+. +++..--.++...-.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~----~~~lGa~~vi~~~~~d~~~~~~~~~~~~~ 297 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEI----CRAMGAEAIIDRNAEGYRFWKDENTQDPK 297 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHH----HHHHTCCEEEETTTTTCCSEEETTEECHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHH----HHhhCCcEEEecCcCcccccccccccchH
Confidence 36789999999987 34667777887754 589999988744333 32221111221111110
Q ss_pred ------cccc--cCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 205 ------AKYR--MLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 205 ------~~~~--~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
.... .....+|+||-.... ..+. .+.++|+++|++++.
T Consensus 298 ~~~~~~~~i~~~t~g~g~Dvvid~~G~----~~~~-~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 298 EWKRFGKRIRELTGGEDIDIVFEHPGR----ETFG-ASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECSCH----HHHH-HHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEcCCc----hhHH-HHHHHhhCCcEEEEE
Confidence 0000 012479999866553 2444 677899999999874
No 432
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.39 E-value=1.8 Score=38.50 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=53.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC---CCeEEEEccCCCCccccc-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR---TNVIPIIEDARHPAKYRM-------LV 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~---~nI~~~~~D~~~~~~~~~-------~~ 211 (305)
.+.+||-.|+.. ....+++..+ ....+|+.++.++....++.+..... .++.++.+|+++...... ..
T Consensus 7 ~~k~vlVTGas~-gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGAN-GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTS-THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCch-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 357888888764 5666666554 23458999999987666665554432 278999999988653211 12
Q ss_pred CcEeEEEEeCC
Q 021911 212 GMVDVIFSDVA 222 (305)
Q Consensus 212 ~~fD~V~~d~~ 222 (305)
..+|+||.++.
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998775
No 433
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.29 E-value=0.59 Score=42.55 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=54.4
Q ss_pred CCEEEEEecCC-CccHHHHHhhhCCCcEEEEEeCCh---HHHHHHHHHHHcCCCeEEEEccCCC-Ccc-cccCCCcEeEE
Q 021911 144 GARVLYLGAAS-GTTVSHVSDIVGPNGVVYAVEFSH---RSGRDLVNMAKKRTNVIPIIEDARH-PAK-YRMLVGMVDVI 217 (305)
Q Consensus 144 g~~VLDlG~G~-G~~t~~la~~~~~~~~V~avD~s~---~~~~~l~~~a~~~~nI~~~~~D~~~-~~~-~~~~~~~fD~V 217 (305)
+++||-+|+|. |..+..++...+ .+|+++|.++ ...+.+ +.. ....+ | .+ ... .......+|+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~-~~~----ga~~v--~-~~~~~~~~~~~~~~~d~v 250 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVI-EET----KTNYY--N-SSNGYDKLKDSVGKFDVI 250 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHH-HHH----TCEEE--E-CTTCSHHHHHHHCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHH-HHh----CCcee--c-hHHHHHHHHHhCCCCCEE
Confidence 99999999832 445566666654 4899999986 543222 211 12222 3 22 111 00001469999
Q ss_pred EEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|.....+... +. .+.+.|+++|++++.
T Consensus 251 id~~g~~~~~--~~-~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 251 IDATGADVNI--LG-NVIPLLGRNGVLGLF 277 (366)
T ss_dssp EECCCCCTHH--HH-HHGGGEEEEEEEEEC
T ss_pred EECCCChHHH--HH-HHHHHHhcCCEEEEE
Confidence 9877754321 03 667899999998875
No 434
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=86.25 E-value=1.9 Score=39.30 Aligned_cols=97 Identities=23% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEE
Q 021911 141 IKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 141 ~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~ 218 (305)
++++++||-+|+ +.|..+..+|...+ .+|++++ ++... +.+++..--..+..+-.+....-.....+|+||
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~----~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDAS----ELVRKLGADDVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGH----HHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHH----HHHHHcCCCEEEECCchHHHHHHhhcCCCCEEE
Confidence 778999999984 34556777777754 5899998 65332 233332111122111111111000124699999
Q ss_pred EeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 219 SDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 219 ~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
-....+.. .+. .+.+.|+++|+++..
T Consensus 254 d~~g~~~~--~~~-~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 254 DNVGGSTE--TWA-PDFLKKWSGATYVTL 279 (375)
T ss_dssp ESSCTTHH--HHG-GGGBCSSSCCEEEES
T ss_pred ECCCChhh--hhH-HHHHhhcCCcEEEEe
Confidence 77665422 233 677899999999875
No 435
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=86.18 E-value=1.8 Score=37.10 Aligned_cols=77 Identities=13% Similarity=0.162 Sum_probs=51.4
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CCCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LVGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~~~f 214 (305)
.+.+||-.|++ +....++++.+ ....+|+.+|.++...+++.+.. ..++.++.+|+++...... ..+.+
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 35788888855 55666666654 23458999999986555544433 3578899999988653221 12478
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+|+.++.
T Consensus 84 d~lv~~Ag 91 (259)
T 4e6p_A 84 DILVNNAA 91 (259)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998765
No 436
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.91 E-value=0.92 Score=38.28 Aligned_cols=75 Identities=20% Similarity=0.202 Sum_probs=50.8
Q ss_pred CEEEEEecCCCccHHHHHhhhCCC--cEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPN--GVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 222 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~--~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~ 222 (305)
++||-.| |+|....++++.+-.. .+|++++.++.... .. ...++.++.+|+++..........+|+||.+..
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIH----KP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYANLT 97 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC----SS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred cEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhc----cc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence 4566655 5788888888876544 48999998873211 11 125799999999887654333457899998877
Q ss_pred Chh
Q 021911 223 QPD 225 (305)
Q Consensus 223 ~~~ 225 (305)
...
T Consensus 98 ~~~ 100 (236)
T 3qvo_A 98 GED 100 (236)
T ss_dssp STT
T ss_pred CCc
Confidence 544
No 437
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.90 E-value=1.7 Score=37.56 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=53.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHc--CCCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKK--RTNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~--~~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++. ....++++.+- ...+|+.++.++....++.+...+ ..++.++.+|+++....... ..
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 357788777654 56666665542 345899999998766665555443 36799999999887542211 14
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+++.++.
T Consensus 98 ~id~lv~nAg 107 (266)
T 4egf_A 98 GLDVLVNNAG 107 (266)
T ss_dssp SCSEEEEECC
T ss_pred CCCEEEECCC
Confidence 7899998765
No 438
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=85.89 E-value=5 Score=36.92 Aligned_cols=78 Identities=18% Similarity=0.142 Sum_probs=50.2
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCCC-cEEEEEeCChH---HHHHHHHHHHc----------CCCeEEEEccCCCCcccc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGPN-GVVYAVEFSHR---SGRDLVNMAKK----------RTNVIPIIEDARHPAKYR 208 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~~-~~V~avD~s~~---~~~~l~~~a~~----------~~nI~~~~~D~~~~~~~~ 208 (305)
+.++||-.| |+|....+++..+-.. .+|++++.++. ....+.+..+. ..++.++.+|+.+.....
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 345788777 5788899998876433 47999987764 22232222211 268999999998865443
Q ss_pred cCCCcEeEEEEeCC
Q 021911 209 MLVGMVDVIFSDVA 222 (305)
Q Consensus 209 ~~~~~fD~V~~d~~ 222 (305)
....+|+|+.++.
T Consensus 147 -~~~~~d~Vih~A~ 159 (427)
T 4f6c_A 147 -LPENMDTIIHAGA 159 (427)
T ss_dssp -CSSCCSEEEECCC
T ss_pred -CcCCCCEEEECCc
Confidence 4568999998665
No 439
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.88 E-value=0.93 Score=38.58 Aligned_cols=79 Identities=11% Similarity=0.227 Sum_probs=53.9
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|+. +....++++.+- ...+|+.+|.++.....+.+..... .++.++.+|+++....... ...
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35788888865 556666666542 3458999999987766666655443 5788999999886532211 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 87 id~li~~Ag 95 (253)
T 3qiv_A 87 IDYLVNNAA 95 (253)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998764
No 440
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.85 E-value=1.2 Score=39.69 Aligned_cols=97 Identities=20% Similarity=0.126 Sum_probs=57.9
Q ss_pred cccCCCCCCEEEEEe-cC-CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcE
Q 021911 137 DNIWIKPGARVLYLG-AA-SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 214 (305)
Q Consensus 137 ~~~~~~~g~~VLDlG-~G-~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~f 214 (305)
+...++++++||-+| +| .|..+..+|+..+ .+|++++ ++.. ++.+++..--..+ |..+..........+
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~----~~~~~~lGa~~~i--~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRN----HAFLKALGAEQCI--NYHEEDFLLAISTPV 216 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHH----HHHHHHHTCSEEE--ETTTSCHHHHCCSCE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccch----HHHHHHcCCCEEE--eCCCcchhhhhccCC
Confidence 344788999999986 33 4667778888764 4899887 4432 2333332111222 222221011112579
Q ss_pred eEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 215 DVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 215 D~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
|+||-....+. +. .+.++|+++|+++..
T Consensus 217 D~v~d~~g~~~----~~-~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVGGDV----GI-QSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSCHHH----HH-HHGGGEEEEEEEEEC
T ss_pred CEEEECCCcHH----HH-HHHHhccCCCEEEEe
Confidence 99987655332 23 677899999999875
No 441
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=85.29 E-value=2.3 Score=37.81 Aligned_cols=79 Identities=18% Similarity=0.287 Sum_probs=50.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCC------------hHHHHHHHHHHHcC-CCeEEEEccCCCCcccc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFS------------HRSGRDLVNMAKKR-TNVIPIIEDARHPAKYR 208 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s------------~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~ 208 (305)
.+.+||-.|++. ....+++..+ ....+|+.+|.+ +..+.++.+..... .++.++.+|+++.....
T Consensus 45 ~gk~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 45 QGKVAFITGAAR-GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 457888888654 4566666544 234589999876 44444444444333 57899999998865322
Q ss_pred cC-------CCcEeEEEEeCC
Q 021911 209 ML-------VGMVDVIFSDVA 222 (305)
Q Consensus 209 ~~-------~~~fD~V~~d~~ 222 (305)
.. ...+|+||.++.
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 11 147899998765
No 442
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=85.17 E-value=0.87 Score=39.00 Aligned_cols=79 Identities=16% Similarity=0.219 Sum_probs=51.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhhCC-C---cEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCC------
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVGP-N---GVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVG------ 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~~-~---~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~------ 212 (305)
.+.+||-.|+ +|....++++.+-. . .+|+.++.++.....+.+......++.++.+|+++.........
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 3567887775 56778888876532 2 58999988764433333333334679999999988754321111
Q ss_pred ---cEeEEEEeCC
Q 021911 213 ---MVDVIFSDVA 222 (305)
Q Consensus 213 ---~fD~V~~d~~ 222 (305)
.+|+||.++.
T Consensus 99 g~~~id~li~~Ag 111 (267)
T 1sny_A 99 KDQGLNVLFNNAG 111 (267)
T ss_dssp GGGCCSEEEECCC
T ss_pred CCCCccEEEECCC
Confidence 6899998664
No 443
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.14 E-value=0.83 Score=39.33 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=54.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|+. +....+++..+ ....+|+.++.++...+.+.+..... .++.++.+|+++....... ...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 46788888865 56777777654 23458999999987766666555443 5788999999887532111 146
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 107 id~lv~~Ag 115 (262)
T 3rkr_A 107 CDVLVNNAG 115 (262)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998765
No 444
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.02 E-value=1.7 Score=37.38 Aligned_cols=78 Identities=12% Similarity=0.125 Sum_probs=53.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccccc-------CCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRM-------LVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~-------~~~~ 213 (305)
.+.+||-.|++.| ...+++..+ ....+|+.++.++..++++.+..... .++.++.+|+++...... ....
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678888887655 555555543 23458999999987766666655443 579999999988753221 1247
Q ss_pred EeEEEEeC
Q 021911 214 VDVIFSDV 221 (305)
Q Consensus 214 fD~V~~d~ 221 (305)
+|+++.++
T Consensus 89 id~lv~nA 96 (264)
T 3ucx_A 89 VDVVINNA 96 (264)
T ss_dssp CSEEEECC
T ss_pred CcEEEECC
Confidence 89999876
No 445
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=84.99 E-value=1.4 Score=36.01 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=48.9
Q ss_pred EEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCC---CcEeEEEEeCC
Q 021911 146 RVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV---GMVDVIFSDVA 222 (305)
Q Consensus 146 ~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~---~~fD~V~~d~~ 222 (305)
+||-.| ++|....++++.+-.. +|++++.++.....+.+... . .++.+|+++........ ..+|+|+.++.
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 75 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG---A-RALPADLADELEAKALLEEAGPLDLLVHAVG 75 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT---C-EECCCCTTSHHHHHHHHHHHCSEEEEEECCC
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc---C-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 466666 5778899999887666 99999998855444443332 2 78889998765432222 37999998664
No 446
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.68 E-value=2.8 Score=37.40 Aligned_cols=88 Identities=15% Similarity=0.092 Sum_probs=53.1
Q ss_pred CEEEEEecCCCccHHHHHhhhCC---CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGP---NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDV 221 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~---~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~ 221 (305)
++|.-||+ |.....+|..+.. ..+|+++|.++..++ .+.+..-+.....|..+. .....|+||..+
T Consensus 34 ~kI~IIG~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~----~a~~~G~~~~~~~~~~~~-----~~~~aDvVilav 102 (314)
T 3ggo_A 34 QNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESIS----KAVDLGIIDEGTTSIAKV-----EDFSPDFVMLSS 102 (314)
T ss_dssp SEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHH----HHHHTTSCSEEESCTTGG-----GGGCCSEEEECS
T ss_pred CEEEEEee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHHH----HHHHCCCcchhcCCHHHH-----hhccCCEEEEeC
Confidence 68888875 5666666654421 227999999984433 333332221122232210 124689999988
Q ss_pred CChhHHHHHHHHHhccCCCCcEE
Q 021911 222 AQPDQARILALNASYFLKAGGHF 244 (305)
Q Consensus 222 ~~~~~~~~l~~~a~~~LkpGG~l 244 (305)
|.....+++. .+...|+++-.+
T Consensus 103 p~~~~~~vl~-~l~~~l~~~~iv 124 (314)
T 3ggo_A 103 PVRTFREIAK-KLSYILSEDATV 124 (314)
T ss_dssp CGGGHHHHHH-HHHHHSCTTCEE
T ss_pred CHHHHHHHHH-HHhhccCCCcEE
Confidence 8766666676 778889988543
No 447
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=84.40 E-value=2 Score=37.17 Aligned_cols=78 Identities=9% Similarity=0.108 Sum_probs=52.2
Q ss_pred CCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCcE
Q 021911 144 GARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGMV 214 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~f 214 (305)
+.+||-.|++. ....++++.+ ....+|+.++.++..++++.+..... .++.++.+|+++....... .+.+
T Consensus 4 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 4 DKVILITGASG-GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCcc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46777777654 5666666544 23458999999987766666555443 5688899999886532211 2478
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+++.++.
T Consensus 83 D~lVnnAG 90 (264)
T 3tfo_A 83 DVLVNNAG 90 (264)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998764
No 448
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.08 E-value=1.6 Score=37.07 Aligned_cols=79 Identities=10% Similarity=0.137 Sum_probs=52.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|+ +|....++++.+- ...+|+.++.++.....+.+..+.. .++.++.+|+++....... ...
T Consensus 12 ~~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 12 DNRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3578888775 5667777776542 3458999999876655555544433 5799999999886532211 136
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 91 id~vi~~Ag 99 (260)
T 3awd_A 91 VDILVACAG 99 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998654
No 449
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.05 E-value=1.5 Score=37.12 Aligned_cols=79 Identities=13% Similarity=0.203 Sum_probs=53.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+++||-.| |+|....++++.+ ....+|++++.++.....+.+..+.. .++.++.+|+++....... ...
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 356788777 4577777777654 23458999999986665555544433 5788999999876533211 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 89 ~d~vi~~Ag 97 (255)
T 1fmc_A 89 VDILVNNAG 97 (255)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998664
No 450
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.86 E-value=1.4 Score=37.83 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=53.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccCC------CcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRMLV------GMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~~------~~f 214 (305)
.+.+||-.|++. ....++++.+ ....+|+.++.++..++++.+..+.. .++.++.+|+++........ ..+
T Consensus 6 ~~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 6 RNATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CSCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 357888888765 4566666544 22458999999987666666655543 57899999998875432111 478
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+++.++.
T Consensus 85 d~lv~nAg 92 (252)
T 3h7a_A 85 EVTIFNVG 92 (252)
T ss_dssp EEEEECCC
T ss_pred eEEEECCC
Confidence 99998765
No 451
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=83.76 E-value=1.7 Score=37.63 Aligned_cols=79 Identities=9% Similarity=0.090 Sum_probs=51.9
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|++ +....++++.+ ....+|+.++.++...+++.+..... .++.++.+|+++....... .+.
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 27 DKQVAIVTGAS-RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 35677777754 45666666544 23458999999986666655554432 5788999999886532211 147
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 106 iD~lvnnAg 114 (270)
T 3ftp_A 106 LNVLVNNAG 114 (270)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998765
No 452
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.45 E-value=1.9 Score=37.24 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=47.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEe-CChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVE-FSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD-~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++.| ...+++..+- ...+|+.++ .++...+.+.+..... .++.++.+|+++....... ..
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678888887654 5555554431 234777764 3444444444444433 5789999999886532211 24
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+++.++.
T Consensus 105 ~iD~lvnnAG 114 (267)
T 3u5t_A 105 GVDVLVNNAG 114 (267)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998775
No 453
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=83.38 E-value=2.3 Score=36.78 Aligned_cols=79 Identities=13% Similarity=0.203 Sum_probs=52.9
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------C-C
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------V-G 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~-~ 212 (305)
.+.+||-.|+. +....++++.+- ...+|+.++.++...+++.+..... .++.++.+|+.+....... . .
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35788888864 556666666542 3458999999986665555544432 5788999999886532211 1 5
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 99 ~id~lv~nAg 108 (273)
T 1ae1_A 99 KLNILVNNAG 108 (273)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 7899998764
No 454
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=83.36 E-value=2.6 Score=36.70 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=50.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-------CCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-------VGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-------~~~f 214 (305)
.+.+||-.|++. ....+++..+ ....+|+.+|.++...+++.+.. ..++.++.+|+++....... .+.+
T Consensus 28 ~gk~vlVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 28 AGKVAIVTGAGA-GIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp TTCEEEETTTTS-THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 357788878655 4556665543 23458999999986555544433 35788999999887532111 2478
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+|+.++.
T Consensus 105 D~lvnnAg 112 (277)
T 3gvc_A 105 DKLVANAG 112 (277)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998765
No 455
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=83.22 E-value=2.6 Score=36.40 Aligned_cols=79 Identities=18% Similarity=0.276 Sum_probs=50.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeC-------------ChHHHHHHHHHHHcC-CCeEEEEccCCCCccc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEF-------------SHRSGRDLVNMAKKR-TNVIPIIEDARHPAKY 207 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~-------------s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~ 207 (305)
.+.+||-.|++. ....+++..+ ....+|+.+|. ++..+.++.+..... .++.++.+|+.+....
T Consensus 10 ~~k~~lVTGas~-GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 10 EGRVAFITGAAR-GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCcc-HHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 467888888665 4555665543 23458999988 555555554444433 6789999999886532
Q ss_pred ccC-------CCcEeEEEEeCC
Q 021911 208 RML-------VGMVDVIFSDVA 222 (305)
Q Consensus 208 ~~~-------~~~fD~V~~d~~ 222 (305)
... ...+|+++.++.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 211 146899998765
No 456
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=83.22 E-value=4 Score=35.19 Aligned_cols=74 Identities=16% Similarity=0.273 Sum_probs=48.9
Q ss_pred CEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CCCcEeE
Q 021911 145 ARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LVGMVDV 216 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~~~fD~ 216 (305)
++||--|++.| ....+|..+ ....+|+.+|.++.. +.+.+++..++.++++|+++...... ..+.+|+
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKR---SADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHH---HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57887787665 455555443 234689999999843 33344445789999999988653211 1258999
Q ss_pred EEEeCC
Q 021911 217 IFSDVA 222 (305)
Q Consensus 217 V~~d~~ 222 (305)
++.++.
T Consensus 79 LVNNAG 84 (247)
T 3ged_A 79 LVNNAC 84 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998774
No 457
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=83.12 E-value=3.2 Score=35.21 Aligned_cols=74 Identities=15% Similarity=0.260 Sum_probs=47.5
Q ss_pred CEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-------CCcEeE
Q 021911 145 ARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-------VGMVDV 216 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-------~~~fD~ 216 (305)
.+||-.|++ +....++++.+ ....+|+.+|.++.... +.+++..++.++.+|+++....... .+.+|+
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 78 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQICLDFLEAGDKVCFIDIDEKRSA---DFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHH---HHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 567777755 45666666554 23458999999984332 3333346788999999886532211 147899
Q ss_pred EEEeCC
Q 021911 217 IFSDVA 222 (305)
Q Consensus 217 V~~d~~ 222 (305)
++.++.
T Consensus 79 lv~nAg 84 (247)
T 3dii_A 79 LVNNAC 84 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998764
No 458
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.98 E-value=3.7 Score=35.19 Aligned_cols=79 Identities=10% Similarity=0.112 Sum_probs=52.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHc-C--CCeEEEEccCCCCccccc-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKK-R--TNVIPIIEDARHPAKYRM-------LV 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~-~--~nI~~~~~D~~~~~~~~~-------~~ 211 (305)
.+.+||-.|++. ....++++.+ ....+|+.++.++...+++.+.... . .++.++.+|+++...... ..
T Consensus 7 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGSS-GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 357888888665 4666666544 2345899999998766666655544 2 358999999988653211 12
Q ss_pred CcEeEEEEeCC
Q 021911 212 GMVDVIFSDVA 222 (305)
Q Consensus 212 ~~fD~V~~d~~ 222 (305)
..+|+++.++.
T Consensus 86 g~id~lvnnAg 96 (265)
T 3lf2_A 86 GCASILVNNAG 96 (265)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998765
No 459
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=82.93 E-value=1.8 Score=36.76 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=50.0
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeC-ChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEF-SHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~-s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
+.+||-.|+ +|....++++.+- ...+|+.++. ++.....+.+..... .++.++.+|+++....... ...
T Consensus 7 ~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 7 GKVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 567887775 5667777776542 3458999998 665554544444332 5688899999876532111 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+||.++.
T Consensus 86 id~li~~Ag 94 (261)
T 1gee_A 86 LDVMINNAG 94 (261)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998664
No 460
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=82.91 E-value=0.86 Score=39.95 Aligned_cols=38 Identities=24% Similarity=0.475 Sum_probs=30.0
Q ss_pred CCcEeEEEEeCCC----------hh---HHHHHHHHHhccCCCCcEEEEEE
Q 021911 211 VGMVDVIFSDVAQ----------PD---QARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 211 ~~~fD~V~~d~~~----------~~---~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
...||+||+|+.. .| ...+|...+.++|||||.+++..
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~a 259 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRA 259 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 3799999999982 23 34455557889999999999986
No 461
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.83 E-value=2.1 Score=36.62 Aligned_cols=79 Identities=14% Similarity=0.210 Sum_probs=52.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------C-C
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------V-G 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~-~ 212 (305)
.+++||-.|+ +|....++++.+- ...+|+.++.++....++.+..... .++.++.+|+++....... . .
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578888886 4566666665542 3458999999986665555444332 4688899999886432111 1 5
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 87 ~id~lv~~Ag 96 (260)
T 2ae2_A 87 KLNILVNNAG 96 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998765
No 462
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=82.70 E-value=2.5 Score=35.36 Aligned_cols=78 Identities=12% Similarity=0.036 Sum_probs=51.7
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHH--cCCCeEEEEccCCCCcccccCC-------Cc
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAK--KRTNVIPIIEDARHPAKYRMLV-------GM 213 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~--~~~nI~~~~~D~~~~~~~~~~~-------~~ 213 (305)
+.+||-.|+. +....++++.+- ...+|+.++.++...+++.+... ...++.++.+|+++........ +.
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 3567777754 556667666542 23579999999866666555443 2367899999998875432111 37
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+++.++.
T Consensus 81 id~li~~Ag 89 (235)
T 3l77_A 81 VDVVVANAG 89 (235)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 899998765
No 463
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=82.69 E-value=4.3 Score=34.64 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=49.4
Q ss_pred CCCEEEEEecC-CCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHH-HcCCCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAA-SGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMA-KKRTNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G-~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a-~~~~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+++||-.|++ +|....++++.+- ...+|+.++.++. ..+.++.. .....+.++.+|+++....... ..
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35789999986 3667777776542 2358999998874 12222222 2223578899999886532211 13
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 86 ~iD~lv~~Ag 95 (261)
T 2wyu_A 86 GLDYLVHAIA 95 (261)
T ss_dssp SEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998764
No 464
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=82.65 E-value=3.5 Score=37.47 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCCCEEEEEecC--CCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcc-c-ccCCCcEeEE
Q 021911 142 KPGARVLYLGAA--SGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAK-Y-RMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G--~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~-~-~~~~~~fD~V 217 (305)
+++++||-+|++ .|..+..+|+..+ .+|+++. ++.. ++.+++..--..+..+-.+... . ....+.+|+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~----~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHN----FDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGG----HHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHH----HHHHHHcCCcEEEECCCchHHHHHHHHccCCccEE
Confidence 789999999983 6778888888865 4788885 7643 2334433211222221111111 0 0112459999
Q ss_pred EEeCCChhHHHHHHHHHhccC-CCCcEEEEE
Q 021911 218 FSDVAQPDQARILALNASYFL-KAGGHFVIS 247 (305)
Q Consensus 218 ~~d~~~~~~~~~l~~~a~~~L-kpGG~lv~s 247 (305)
|-....+... . .+.+.| +++|+++..
T Consensus 236 ~d~~g~~~~~---~-~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 236 LDCITNVEST---T-FCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EESSCSHHHH---H-HHHHHSCTTCEEEEES
T ss_pred EECCCchHHH---H-HHHHHhhcCCCEEEEE
Confidence 9776654332 2 455677 699998874
No 465
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.64 E-value=2.1 Score=37.22 Aligned_cols=79 Identities=13% Similarity=0.123 Sum_probs=52.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC------CCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML------VGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~------~~~f 214 (305)
.+.+||-.|++ +....+++..+ ....+|+.++.++....++.+..... .++.++.+|+.+....... ...+
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 35788877765 45666666544 23458999999876555555554433 6789999999886532111 1478
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+++.++.
T Consensus 111 D~lvnnAg 118 (275)
T 4imr_A 111 DILVINAS 118 (275)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998765
No 466
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=82.35 E-value=4.5 Score=35.09 Aligned_cols=77 Identities=10% Similarity=0.155 Sum_probs=50.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-------CCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-------VGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-------~~~f 214 (305)
.+.+||-.|++ +....++++.+ ....+|+.+|.++....++.+.. ..++.++.+|+++....... ...+
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--GSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 35788888865 45666666554 23458999999986555544432 35788999999886532211 1478
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+|+.++.
T Consensus 103 D~lv~nAg 110 (277)
T 4dqx_A 103 DVLVNNAG 110 (277)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998765
No 467
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=82.18 E-value=2.6 Score=35.64 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=52.3
Q ss_pred CCCCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc---CCCcEeE
Q 021911 141 IKPGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM---LVGMVDV 216 (305)
Q Consensus 141 ~~~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~---~~~~fD~ 216 (305)
..++.+||-.|+. +....++++.+- ...+|+.++.++..++++.+... .++.++.+|+.+...... ....+|+
T Consensus 11 ~~~~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 11 DLTGKTSLITGAS-SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp CCTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred cCCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 3457888888865 556666666542 34589999999865555544432 478899999987643211 1247899
Q ss_pred EEEeCC
Q 021911 217 IFSDVA 222 (305)
Q Consensus 217 V~~d~~ 222 (305)
|+.++.
T Consensus 88 li~~Ag 93 (249)
T 3f9i_A 88 LVCNAG 93 (249)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998765
No 468
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=82.09 E-value=2.6 Score=36.58 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=55.5
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccccc-------CCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRM-------LVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~-------~~~~ 213 (305)
.++.+|--|++.| ....+|..+ ....+|+.+|.++..++++.+..+.. .++.++++|+++...... ..+.
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678888887765 455555443 23468999999998777777666554 678999999988754221 1258
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
.|+++.|+.
T Consensus 85 iDiLVNNAG 93 (254)
T 4fn4_A 85 IDVLCNNAG 93 (254)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 899998764
No 469
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=82.06 E-value=1.9 Score=37.15 Aligned_cols=79 Identities=13% Similarity=0.119 Sum_probs=53.2
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccccc-------CCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRM-------LVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~-------~~~~ 213 (305)
.+.+||-.|+ +|....++++.+- ...+|+.++.++....++.+..+.. .++.++.+|+.+...... ....
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 3578887775 4667777776542 3458999999986666655554443 578999999987653211 1247
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+||.++.
T Consensus 109 iD~li~~Ag 117 (272)
T 1yb1_A 109 VSILVNNAG 117 (272)
T ss_dssp CSEEEECCC
T ss_pred CcEEEECCC
Confidence 899998764
No 470
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.04 E-value=5.3 Score=34.35 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=50.3
Q ss_pred CCCEEEEEecC-CCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHH-HcCCCeEEEEccCCCCccccc-------CCC
Q 021911 143 PGARVLYLGAA-SGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMA-KKRTNVIPIIEDARHPAKYRM-------LVG 212 (305)
Q Consensus 143 ~g~~VLDlG~G-~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a-~~~~nI~~~~~D~~~~~~~~~-------~~~ 212 (305)
.+.+||-.|++ ++....++++.+- ...+|+.++.++. ..+.++.. ....++.++.+|+.+...... ...
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999986 3677888877653 3458999988764 22222222 222357889999988653211 124
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 84 ~id~lv~nAg 93 (275)
T 2pd4_A 84 SLDFIVHSVA 93 (275)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899998664
No 471
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=81.96 E-value=1.5 Score=40.49 Aligned_cols=78 Identities=18% Similarity=0.155 Sum_probs=54.2
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCC--cEEEEEeCChHHHHHHHHHHHcC-----CCeEEEEccCCCCccccc--CCCcE
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPN--GVVYAVEFSHRSGRDLVNMAKKR-----TNVIPIIEDARHPAKYRM--LVGMV 214 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~--~~V~avD~s~~~~~~l~~~a~~~-----~nI~~~~~D~~~~~~~~~--~~~~f 214 (305)
+++||-.| |+|....++++.+-.. ..|++++.++.....+.+..... .++.++.+|+++...... ....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 57888887 4688888888766333 48999999986655555444332 578999999988653221 12578
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+|+..+.
T Consensus 114 D~Vih~Aa 121 (399)
T 3nzo_A 114 DYVLNLSA 121 (399)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99997655
No 472
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=81.76 E-value=1.9 Score=36.94 Aligned_cols=79 Identities=15% Similarity=0.227 Sum_probs=51.3
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-------CCcE
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-------VGMV 214 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-------~~~f 214 (305)
.+.+||-.|+ +|....++++.+- ...+|+.++.++.....+.+......++.++.+|+++....... ...+
T Consensus 15 ~~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 15 QDKVAIITGG-AGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578888885 5667777776542 24589999998755444444332223799999999886533211 1378
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+||.++.
T Consensus 94 d~li~~Ag 101 (278)
T 2bgk_A 94 DIMFGNVG 101 (278)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 99997654
No 473
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.61 E-value=1.9 Score=37.51 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=53.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccCCCC-ccccc-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDARHP-AKYRM-------LV 211 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~~~~-~~~~~-------~~ 211 (305)
.+.+||-.|+. +....++++.+ ....+|+.++.++....++++..... .++.++.+|+.+. ..... ..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 35678877765 55666666554 23458999999987766666665544 4799999999887 32111 12
Q ss_pred CcEeEEEEeCC
Q 021911 212 GMVDVIFSDVA 222 (305)
Q Consensus 212 ~~fD~V~~d~~ 222 (305)
..+|+||.++.
T Consensus 90 g~iD~lv~nAg 100 (311)
T 3o26_A 90 GKLDILVNNAG 100 (311)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999998876
No 474
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.59 E-value=7.5 Score=31.80 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=48.7
Q ss_pred CEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ 223 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~ 223 (305)
++||-.| ++|....++++.+ ....+|++++-++..... . ...+++++.+|+.+... .....+|+||..+..
T Consensus 1 MkilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~-~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD----R-LGATVATLVKEPLVLTE--ADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----H-TCTTSEEEECCGGGCCH--HHHTTCSEEEECCCC
T ss_pred CEEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccc----c-cCCCceEEecccccccH--hhcccCCEEEECCcc
Confidence 3677777 5678888888765 233589999998743222 2 12589999999987754 223578999987753
No 475
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=81.56 E-value=1.8 Score=40.45 Aligned_cols=98 Identities=17% Similarity=0.166 Sum_probs=58.0
Q ss_pred cCCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCC-CeEEE--EccCCCC---------
Q 021911 139 IWIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRT-NVIPI--IEDARHP--------- 204 (305)
Q Consensus 139 ~~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~-nI~~~--~~D~~~~--------- 204 (305)
..++++++||-.|+ +.|..+..+|...+ .+|++++.++... +.+++.. ...+. ..|+...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~----~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKE----AAVRALGCDLVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHH----HHHHHTTCCCEEEHHHHTCCTTGGGCHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHH----HHHHhcCCCEEEecccccccccccccccccc
Confidence 46789999999987 34556777777754 5899999888443 3333321 11111 1121110
Q ss_pred -------ccc-ccCCCcEeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 205 -------AKY-RMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 205 -------~~~-~~~~~~fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
... ......+|+||-....+ .+. .+..+|+++|++++.
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~-~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTGRV----TFG-LSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSCHH----HHH-HHHHHSCTTCEEEES
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCCch----HHH-HHHHHHhcCCEEEEE
Confidence 000 00124699998766542 344 677899999999875
No 476
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.55 E-value=4.5 Score=33.00 Aligned_cols=70 Identities=11% Similarity=0.059 Sum_probs=47.9
Q ss_pred CEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEeCCC
Q 021911 145 ARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQ 223 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d~~~ 223 (305)
++||-+| ++|....++++.+- ...+|++++-++.... ... +++.++..|+++... . ....+|+||..+..
T Consensus 1 MkvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~--~~~~~~~~D~~d~~~-~-~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKIT----QTH--KDINILQKDIFDLTL-S-DLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHH----HHC--SSSEEEECCGGGCCH-H-HHTTCSEEEECCCS
T ss_pred CeEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhh----hcc--CCCeEEeccccChhh-h-hhcCCCEEEECCcC
Confidence 3677666 46778888877652 2358999999874322 222 689999999987754 1 23578999987763
No 477
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=81.49 E-value=5.2 Score=33.65 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=47.8
Q ss_pred CCEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccc------cCCCcEeEE
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYR------MLVGMVDVI 217 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~------~~~~~fD~V 217 (305)
+.+||-.|+ ++....++++.+.....|+.++.++..... ..+..++.++.+|+.+..... .....+|+|
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~g~~v~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 79 (245)
T 3e9n_A 5 KKIAVVTGA-TGGMGIEIVKDLSRDHIVYALGRNPEHLAA----LAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL 79 (245)
T ss_dssp -CEEEEEST-TSHHHHHHHHHHTTTSEEEEEESCHHHHHH----HHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred CCEEEEEcC-CCHHHHHHHHHHhCCCeEEEEeCCHHHHHH----HHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence 467887775 456788888776556789999998844333 233457888988875542111 112478999
Q ss_pred EEeCC
Q 021911 218 FSDVA 222 (305)
Q Consensus 218 ~~d~~ 222 (305)
+.++.
T Consensus 80 v~~Ag 84 (245)
T 3e9n_A 80 VHAAA 84 (245)
T ss_dssp EECC-
T ss_pred EECCC
Confidence 98765
No 478
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=81.20 E-value=1.6 Score=38.06 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=53.2
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|++. ....++++.+ ....+|+.++.++...+++.+..... .++.++.+|+++....... ...
T Consensus 31 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 31 SGKRALITGAST-GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467888888664 5666666544 23458999999876666665555443 5789999999887542211 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 110 iD~lvnnAg 118 (276)
T 3r1i_A 110 IDIAVCNAG 118 (276)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998765
No 479
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=81.13 E-value=4.8 Score=33.86 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=50.1
Q ss_pred CCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCccccc-------CCCcEe
Q 021911 144 GARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRM-------LVGMVD 215 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~-------~~~~fD 215 (305)
+.+||-.|++ +....+++..+ ....+|+.++.++..++++.+.... ++.++.+|+++...... ..+.+|
T Consensus 3 ~k~vlVTGas-~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN--AVIGIVADLAHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence 3577877765 45666666544 2345899999998666665554432 58999999988653211 124789
Q ss_pred EEEEeCC
Q 021911 216 VIFSDVA 222 (305)
Q Consensus 216 ~V~~d~~ 222 (305)
+++.++.
T Consensus 80 ~lvnnAg 86 (235)
T 3l6e_A 80 LVLHCAG 86 (235)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9998765
No 480
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.75 E-value=9.9 Score=33.74 Aligned_cols=89 Identities=18% Similarity=0.223 Sum_probs=54.7
Q ss_pred CEEEEEecCCCccHHHHHhhhCCC--cEEEEEeCChH---HHHHHHHHHHcCCCeEEEEc-cCCCCcccccCCCcEeEEE
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPN--GVVYAVEFSHR---SGRDLVNMAKKRTNVIPIIE-DARHPAKYRMLVGMVDVIF 218 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~--~~V~avD~s~~---~~~~l~~~a~~~~nI~~~~~-D~~~~~~~~~~~~~fD~V~ 218 (305)
++|.-||+ |.....+|..+-.. ..|+++|.++. ...+..+.+.+. .+ .. |..+ .....|+||
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~-g~---~~~s~~e------~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL-GV---EPLDDVA------GIACADVVL 92 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT-TC---EEESSGG------GGGGCSEEE
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC-CC---CCCCHHH------HHhcCCEEE
Confidence 57877775 66777777655333 48999999862 122233333322 33 11 2211 134679999
Q ss_pred EeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 219 SDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 219 ~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+.+|.+...+.+. .+...|+++-. ++.
T Consensus 93 ~avp~~~~~~~~~-~i~~~l~~~~i-vv~ 119 (317)
T 4ezb_A 93 SLVVGAATKAVAA-SAAPHLSDEAV-FID 119 (317)
T ss_dssp ECCCGGGHHHHHH-HHGGGCCTTCE-EEE
T ss_pred EecCCHHHHHHHH-HHHhhcCCCCE-EEE
Confidence 9999887777775 78888988754 444
No 481
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=80.70 E-value=4.5 Score=34.34 Aligned_cols=79 Identities=10% Similarity=0.022 Sum_probs=50.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC--CCeEEEEccC--CCCccccc-------C
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR--TNVIPIIEDA--RHPAKYRM-------L 210 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~--~nI~~~~~D~--~~~~~~~~-------~ 210 (305)
.+.+||-.|++ +....++++.+ ....+|+.++.++...+++.+..... .++.++..|+ .+...... .
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 46788888865 45666666544 23458999999986666655544332 4788999998 55432110 1
Q ss_pred CCcEeEEEEeCC
Q 021911 211 VGMVDVIFSDVA 222 (305)
Q Consensus 211 ~~~fD~V~~d~~ 222 (305)
...+|+++.++.
T Consensus 90 ~g~id~lv~nAg 101 (252)
T 3f1l_A 90 YPRLDGVLHNAG 101 (252)
T ss_dssp CSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 247899998664
No 482
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=80.67 E-value=3.2 Score=37.39 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=54.3
Q ss_pred CCCCCCEEEEEec--CCCccHHHHHhhhCCCcEEEE-EeCChHHHHHHHHHHHcCCCeEEEEcc---CCCCcccccCCCc
Q 021911 140 WIKPGARVLYLGA--ASGTTVSHVSDIVGPNGVVYA-VEFSHRSGRDLVNMAKKRTNVIPIIED---ARHPAKYRMLVGM 213 (305)
Q Consensus 140 ~~~~g~~VLDlG~--G~G~~t~~la~~~~~~~~V~a-vD~s~~~~~~l~~~a~~~~nI~~~~~D---~~~~~~~~~~~~~ 213 (305)
.++++++||-+|+ +.|..+..+|+..+ .+|++ ++.++.. .+.++.+++..--..+..+ .............
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 240 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRPDI-QKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ 240 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCSCH-HHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCC
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCccch-HHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCC
Confidence 6788999999997 45667888888765 34554 4554321 1223334333111222211 1111111000114
Q ss_pred EeEEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 214 fD~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+|+||-....+. +. .+.++|+++|++++.
T Consensus 241 ~Dvvid~~g~~~----~~-~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 241 PRLALNCVGGKS----ST-ELLRQLARGGTMVTY 269 (357)
T ss_dssp CSEEEESSCHHH----HH-HHHTTSCTTCEEEEC
T ss_pred ceEEEECCCcHH----HH-HHHHhhCCCCEEEEE
Confidence 899986555332 23 466899999999875
No 483
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=80.50 E-value=4.6 Score=34.97 Aligned_cols=79 Identities=13% Similarity=0.104 Sum_probs=54.9
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccc-------cCCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYR-------MLVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~-------~~~~~ 213 (305)
.++.+|--|++.| ....+|..+ ....+|+.+|.++..+++..+...+. .++.++++|+++..... .....
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 4678888786665 555555544 23468999999987777766666554 67899999998875321 12368
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
.|+++.|+.
T Consensus 87 iDiLVNNAG 95 (255)
T 4g81_D 87 VDILINNAG 95 (255)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 999998775
No 484
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.39 E-value=4.8 Score=34.78 Aligned_cols=79 Identities=15% Similarity=0.165 Sum_probs=48.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHH-HHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRS-GRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~-~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|+ ++....++++.+- ...+|+.++.++.. .+.+.+..... .++.++.+|+.+....... ..
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3567877776 4567777776542 23589998887532 23333333332 5788999999876432111 14
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 107 ~iD~lv~~Ag 116 (283)
T 1g0o_A 107 KLDIVCSNSG 116 (283)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998765
No 485
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=80.37 E-value=2.6 Score=36.06 Aligned_cols=78 Identities=12% Similarity=0.167 Sum_probs=51.1
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHc--CCCeEEEEccCCCCcccccC-------CCc
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKK--RTNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~--~~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
+.+||-.|+. |....++++.+- ...+|+.++.++....++.+.... ..++.++.+|+++....... .+.
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 7 GKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5778887765 556677666542 235899999988655555444332 35788999999886532211 137
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 86 id~lv~~Ag 94 (263)
T 3ai3_A 86 ADILVNNAG 94 (263)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998764
No 486
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=80.37 E-value=7.4 Score=34.68 Aligned_cols=100 Identities=8% Similarity=0.008 Sum_probs=58.6
Q ss_pred CEEEEEecCCCccHHHHHhhhCCCcEEEEEeCChHHHHHHHHHHH-----cCCCeEEEEccCCCCcccccC------CCc
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAK-----KRTNVIPIIEDARHPAKYRML------VGM 213 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~~~~V~avD~s~~~~~~l~~~a~-----~~~nI~~~~~D~~~~~~~~~~------~~~ 213 (305)
..||+||||-=+....+.. .....|+=||. |..+..-.+... ...+..++.+|+++ .....+ ...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~--~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW--PTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC--CTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CeEEEeCCCCCchhhhccC--CCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 5799999998776444431 12357888884 544443333333 23578899999987 211111 122
Q ss_pred EeEEEEeCC----ChhHHHHHHHHHhccCCCCcEEEEEE
Q 021911 214 VDVIFSDVA----QPDQARILALNASYFLKAGGHFVISI 248 (305)
Q Consensus 214 fD~V~~d~~----~~~~~~~l~~~a~~~LkpGG~lv~s~ 248 (305)
--++++... .+++...+...+...+.||.+|++..
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 234444332 33344334437888889999999986
No 487
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=80.35 E-value=7.3 Score=33.85 Aligned_cols=94 Identities=12% Similarity=0.082 Sum_probs=53.0
Q ss_pred CEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcCCCeEEEE--------ccCCCCcccccCCCcEe
Q 021911 145 ARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKRTNVIPII--------EDARHPAKYRMLVGMVD 215 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~--------~D~~~~~~~~~~~~~fD 215 (305)
++|+-+|+ |.....+|..+.. ...|+.+|.++...+.+.+. .+.... .++............+|
T Consensus 4 m~i~iiG~--G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 76 (316)
T 2ew2_A 4 MKIAIAGA--GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-----GLIADFNGEEVVANLPIFSPEEIDHQNEQVD 76 (316)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-----CEEEEETTEEEEECCCEECGGGCCTTSCCCS
T ss_pred CeEEEECc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-----CEEEEeCCCeeEecceeecchhhcccCCCCC
Confidence 47888877 5666666654421 24799999998554443322 122211 11111111100112789
Q ss_pred EEEEeCCChhHHHHHHHHHhccCCCCcEEEEE
Q 021911 216 VIFSDVAQPDQARILALNASYFLKAGGHFVIS 247 (305)
Q Consensus 216 ~V~~d~~~~~~~~~l~~~a~~~LkpGG~lv~s 247 (305)
+||+.++......++. .+...|+++-. +++
T Consensus 77 ~vi~~v~~~~~~~v~~-~l~~~l~~~~~-iv~ 106 (316)
T 2ew2_A 77 LIIALTKAQQLDAMFK-AIQPMITEKTY-VLC 106 (316)
T ss_dssp EEEECSCHHHHHHHHH-HHGGGCCTTCE-EEE
T ss_pred EEEEEeccccHHHHHH-HHHHhcCCCCE-EEE
Confidence 9999888665556665 77888888754 444
No 488
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=80.27 E-value=3.4 Score=35.86 Aligned_cols=79 Identities=8% Similarity=0.054 Sum_probs=51.0
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeC-ChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEF-SHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~-s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++. ....++++.+- ...+|+.++. ++.....+.+..... .++.++.+|+++....... .+
T Consensus 28 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 28 ARPVAIVTGGRR-GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCC-HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457788888654 56666665542 3458999986 555555554444433 5799999999887542211 13
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 107 ~iD~lvnnAg 116 (280)
T 4da9_A 107 RIDCLVNNAG 116 (280)
T ss_dssp CCCEEEEECC
T ss_pred CCCEEEECCC
Confidence 7899998764
No 489
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=80.25 E-value=1.7 Score=37.22 Aligned_cols=79 Identities=10% Similarity=0.183 Sum_probs=52.6
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+.+||-.|++. ....++++.+- ...+|+.+|.++...+++.+..... .++.++.+|+++....... .+.
T Consensus 11 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 11 NDAVAIVTGAAA-GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TTCEEEECSCSS-HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 357888888655 45555555431 2358999999987666666555443 6799999999886532211 147
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+++.++.
T Consensus 90 id~lv~nAg 98 (256)
T 3gaf_A 90 ITVLVNNAG 98 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998764
No 490
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=80.07 E-value=2.6 Score=36.73 Aligned_cols=79 Identities=15% Similarity=0.173 Sum_probs=52.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~ 213 (305)
.+..||-.|++. ....+++..+ ....+|+.++.++..+.++.+..... .++.++.+|+++....... .+.
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGS-GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 457888888655 4666666544 23458999999986666665555433 5789999999886532111 247
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+++.++.
T Consensus 106 iD~lVnnAg 114 (283)
T 3v8b_A 106 LDIVVANAG 114 (283)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998664
No 491
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=80.03 E-value=2.8 Score=36.37 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=51.2
Q ss_pred CCCEEEEEecCCCccHHHHHhhh-CCCcEEEEEeCC----------------hHHHHHHHHHHHcC-CCeEEEEccCCCC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIV-GPNGVVYAVEFS----------------HRSGRDLVNMAKKR-TNVIPIIEDARHP 204 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~-~~~~~V~avD~s----------------~~~~~~l~~~a~~~-~nI~~~~~D~~~~ 204 (305)
.+.+||-.|++.| ...+++..+ ....+|+.+|.+ +..+.++.+..... .++.++.+|+++.
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 4678888887654 566666544 234589999886 44444554444433 5799999999886
Q ss_pred cccccC-------CCcEeEEEEeCC
Q 021911 205 AKYRML-------VGMVDVIFSDVA 222 (305)
Q Consensus 205 ~~~~~~-------~~~fD~V~~d~~ 222 (305)
...... ...+|+++.++.
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCc
Confidence 532211 147899998765
No 492
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=79.96 E-value=3.7 Score=35.15 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEE-eCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CC
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAV-EFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VG 212 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~av-D~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~ 212 (305)
.+.+||-.|++ +....++++.+- ...+|+.+ +.++....++.+..... .++.++.+|+++....... .+
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35677777755 556677666542 23477776 77776555555555443 5799999999887532211 14
Q ss_pred cEeEEEEeCC
Q 021911 213 MVDVIFSDVA 222 (305)
Q Consensus 213 ~fD~V~~d~~ 222 (305)
.+|+|+.++.
T Consensus 82 ~id~lv~nAg 91 (258)
T 3oid_A 82 RLDVFVNNAA 91 (258)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6799998774
No 493
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=79.96 E-value=1 Score=42.39 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=29.3
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC----CcEEEEEeCChHH
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP----NGVVYAVEFSHRS 180 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~----~~~V~avD~s~~~ 180 (305)
...|+|+|+|+|++...+.+.+.. ..+++.||+|+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~L 178 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGEL 178 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHH
Confidence 379999999999999888865521 2379999999844
No 494
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=79.81 E-value=1.6 Score=36.91 Aligned_cols=78 Identities=10% Similarity=0.099 Sum_probs=51.1
Q ss_pred CCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccC-------CCcEe
Q 021911 144 GARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRML-------VGMVD 215 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~-------~~~fD 215 (305)
+.+||-.|+ +|....++++.+- ...+|+.++.++....++.+......++.++.+|+.+....... ...+|
T Consensus 6 ~k~vlVtGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 6 GKVAIITGG-TLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CcEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 567777775 5667777776542 34589999998865555544443335799999999876532111 13689
Q ss_pred EEEEeCC
Q 021911 216 VIFSDVA 222 (305)
Q Consensus 216 ~V~~d~~ 222 (305)
+||.++.
T Consensus 85 ~li~~Ag 91 (251)
T 1zk4_A 85 TLVNNAG 91 (251)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998764
No 495
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=79.79 E-value=2.8 Score=35.91 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=51.8
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccccc-------CCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRM-------LVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~-------~~~~ 213 (305)
.+.+||-.|+. +....++++.+- ...+|+.++.++....++.+..... .++.++.+|+++...... ..+.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 6 NGKVCLVTGAG-GNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 35788887765 456666666542 2358999999986665555554433 468899999987653211 1147
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 85 id~lv~nAg 93 (262)
T 1zem_A 85 IDFLFNNAG 93 (262)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998663
No 496
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=79.75 E-value=4.7 Score=34.90 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC-CcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCcE
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP-NGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGMV 214 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~-~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~f 214 (305)
+.+||-.|+ +|....++++.+-. ..+|+.++.++....++.+..+.. .++.++.+|+++....... ...+
T Consensus 44 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 44 NKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 567888875 46777777776533 357888888876555555554432 5788999999886532211 2468
Q ss_pred eEEEEeCC
Q 021911 215 DVIFSDVA 222 (305)
Q Consensus 215 D~V~~d~~ 222 (305)
|+||.++.
T Consensus 123 d~li~~Ag 130 (285)
T 2c07_A 123 DILVNNAG 130 (285)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998764
No 497
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=79.74 E-value=2.6 Score=36.51 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=52.2
Q ss_pred CCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCccccc-------CCCc
Q 021911 143 PGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRM-------LVGM 213 (305)
Q Consensus 143 ~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~-------~~~~ 213 (305)
.+.+||-.|+. |....++++.+- ...+|+.++.++....++.+..... .++.++.+|+++...... ....
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 35688888864 566677666542 2358999999986655555544432 578899999987653211 1247
Q ss_pred EeEEEEeCC
Q 021911 214 VDVIFSDVA 222 (305)
Q Consensus 214 fD~V~~d~~ 222 (305)
+|+|+.++.
T Consensus 100 iD~lv~~Ag 108 (277)
T 2rhc_B 100 VDVLVNNAG 108 (277)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998764
No 498
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=79.68 E-value=2.6 Score=35.88 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=50.3
Q ss_pred CEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHcC-CCeEEEEccCCCCcccccC-------CCcEe
Q 021911 145 ARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKKR-TNVIPIIEDARHPAKYRML-------VGMVD 215 (305)
Q Consensus 145 ~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~~-~nI~~~~~D~~~~~~~~~~-------~~~fD 215 (305)
.+||-.|+ ++....++++.+- ...+|+.++.++....++.+..... .++.++.+|+++....... .+.+|
T Consensus 3 k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 3 KVALVTGA-GQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 46777775 4556777666542 2358999999986655555444332 5688999999886532111 24789
Q ss_pred EEEEeCC
Q 021911 216 VIFSDVA 222 (305)
Q Consensus 216 ~V~~d~~ 222 (305)
+|+.++.
T Consensus 82 ~lv~nAg 88 (256)
T 1geg_A 82 VIVNNAG 88 (256)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998764
No 499
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=79.67 E-value=6.1 Score=34.61 Aligned_cols=80 Identities=19% Similarity=0.111 Sum_probs=53.4
Q ss_pred CCCCEEEEEecCCCccHHHHHhhhC-CCcEEEEEeCChHHHHHHHHHHHc--CCCeEEE-EccCCCCcccccCCCcEeEE
Q 021911 142 KPGARVLYLGAASGTTVSHVSDIVG-PNGVVYAVEFSHRSGRDLVNMAKK--RTNVIPI-IEDARHPAKYRMLVGMVDVI 217 (305)
Q Consensus 142 ~~g~~VLDlG~G~G~~t~~la~~~~-~~~~V~avD~s~~~~~~l~~~a~~--~~nI~~~-~~D~~~~~~~~~~~~~fD~V 217 (305)
..+++||-.| |+|....++++.+- ...+|++++.++.....+.+.... ..+++++ ..|+++..........+|+|
T Consensus 9 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 9 PEGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 3567898887 46788888887552 235899999887544443333221 1578888 79998766543334578999
Q ss_pred EEeCC
Q 021911 218 FSDVA 222 (305)
Q Consensus 218 ~~d~~ 222 (305)
|..+.
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98765
No 500
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=79.64 E-value=1.6 Score=36.61 Aligned_cols=72 Identities=18% Similarity=0.056 Sum_probs=48.5
Q ss_pred CCEEEEEecCCCccHHHHHhhhCC---CcEEEEEeCChHHHHHHHHHHHcCCCeEEEEccCCCCcccccCCCcEeEEEEe
Q 021911 144 GARVLYLGAASGTTVSHVSDIVGP---NGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSD 220 (305)
Q Consensus 144 g~~VLDlG~G~G~~t~~la~~~~~---~~~V~avD~s~~~~~~l~~~a~~~~nI~~~~~D~~~~~~~~~~~~~fD~V~~d 220 (305)
.++||=.| ++|....++++.+-. ..+|++++.++..... . ..++.++.+|+.+..........+|+||..
T Consensus 4 ~~~ilVtG-asG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 4 LPTVLVTG-ASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I--GGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T--TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEc-CCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c--CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 46788777 467888888776532 3589999998743222 2 346788999998865443333568999875
Q ss_pred CC
Q 021911 221 VA 222 (305)
Q Consensus 221 ~~ 222 (305)
..
T Consensus 77 a~ 78 (253)
T 1xq6_A 77 TS 78 (253)
T ss_dssp CC
T ss_pred cc
Confidence 54
Done!