Query 021912
Match_columns 305
No_of_seqs 208 out of 1330
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 06:36:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021912.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021912hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1536 Biotin holocarboxylase 100.0 1.1E-55 2.3E-60 434.7 22.1 271 32-305 292-589 (649)
2 PRK06955 biotin--protein ligas 100.0 8.3E-49 1.8E-53 371.2 20.3 210 92-304 15-247 (300)
3 TIGR00121 birA_ligase birA, bi 100.0 1.7E-48 3.6E-53 357.1 18.6 186 112-304 2-191 (237)
4 COG0340 BirA Biotin-(acetyl-Co 100.0 1.4E-47 3.1E-52 352.2 18.5 183 115-304 1-188 (238)
5 PRK08330 biotin--protein ligas 100.0 2.4E-46 5.2E-51 342.8 18.5 184 108-303 1-185 (236)
6 PRK11886 bifunctional biotin-- 100.0 5.9E-46 1.3E-50 353.3 20.6 203 92-304 64-270 (319)
7 PTZ00276 biotin/lipoate protei 100.0 2.3E-45 5E-50 338.8 19.3 185 107-303 4-201 (245)
8 PRK13325 bifunctional biotin-- 100.0 1.4E-44 3.1E-49 369.1 21.5 204 91-304 65-276 (592)
9 PTZ00275 biotin-acetyl-CoA-car 100.0 1.4E-44 3E-49 340.4 18.1 192 106-304 13-235 (285)
10 PRK08477 biotin--protein ligas 100.0 1.2E-43 2.7E-48 320.9 17.6 165 111-302 2-172 (211)
11 PRK05935 biotin--protein ligas 100.0 3.5E-42 7.7E-47 306.9 19.2 161 113-285 6-177 (190)
12 PF03099 BPL_LplA_LipB: Biotin 99.9 7E-23 1.5E-27 167.8 7.9 120 114-242 1-125 (125)
13 PRK14348 lipoate-protein ligas 95.7 0.21 4.5E-06 46.1 12.2 120 148-284 79-219 (221)
14 PRK14342 lipoate-protein ligas 94.1 1.2 2.7E-05 40.8 12.7 118 147-284 69-204 (213)
15 TIGR00214 lipB lipoate-protein 93.9 1.8 3.9E-05 38.9 13.0 116 148-283 50-183 (184)
16 TIGR00545 lipoyltrans lipoyltr 93.8 0.21 4.7E-06 48.3 7.5 64 150-222 73-136 (324)
17 PRK14344 lipoate-protein ligas 93.0 2.7 5.9E-05 38.8 12.9 118 147-283 87-221 (223)
18 PRK14345 lipoate-protein ligas 92.4 3.3 7.1E-05 38.5 12.9 118 148-285 76-217 (234)
19 PRK14343 lipoate-protein ligas 91.6 4.4 9.6E-05 37.8 12.6 120 148-286 80-221 (235)
20 COG0095 LplA Lipoate-protein l 91.2 0.69 1.5E-05 43.0 7.0 135 134-284 64-215 (248)
21 PRK14349 lipoate-protein ligas 90.6 7.5 0.00016 35.9 13.0 120 148-285 65-206 (220)
22 PRK14341 lipoate-protein ligas 89.8 9 0.0002 35.2 12.8 116 148-283 70-211 (213)
23 COG0321 LipB Lipoate-protein l 86.7 17 0.00037 33.6 12.4 120 148-285 76-212 (221)
24 PRK03822 lplA lipoate-protein 85.8 2.3 4.9E-05 41.6 6.8 126 139-284 68-213 (338)
25 PRK14346 lipoate-protein ligas 81.4 38 0.00082 31.5 12.5 59 214-283 156-228 (230)
26 PRK14061 unknown domain/lipoat 78.9 5.3 0.00012 41.7 6.7 63 147-221 295-361 (562)
27 PRK14347 lipoate-protein ligas 78.7 54 0.0012 30.1 13.0 118 148-283 68-208 (209)
28 PF04017 DUF366: Domain of unk 58.8 27 0.00058 31.4 5.8 74 161-246 63-139 (183)
29 COG2029 Uncharacterized conser 50.0 62 0.0013 28.9 6.5 69 209-286 109-178 (189)
30 PF05603 DUF775: Protein of un 26.1 2.5E+02 0.0054 25.4 6.8 24 266-289 147-170 (202)
No 1
>KOG1536 consensus Biotin holocarboxylase synthetase/biotin-protein ligase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.1e-55 Score=434.65 Aligned_cols=271 Identities=50% Similarity=0.884 Sum_probs=239.8
Q ss_pred cccccccccccCCc--cceeeeecccchhHHHH-------HHhhhcCCC-cCCCCCC-ceeEEeccccc-----cCCCCC
Q 021912 32 PFRLSASSAAMDSN--SSCMLVLSGKSLAENEI-------AESLKSNST-LKLPDNS-EVSIHLQSEIV-----KQESFD 95 (305)
Q Consensus 32 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~-~~~~~~~~~~~-----~~~~fd 95 (305)
.++..+.+..+..+ ..|.+++|+.++++.|+ ++.+.++++ ++.||++ ++.|.+.+|.. ..+.||
T Consensus 292 r~~~k~~a~~l~~d~k~~~sl~~~~~~s~~tei~d~~~~~~~~ld~s~~~~k~~D~s~k~~i~~~~E~di~~~~~s~nFd 371 (649)
T KOG1536|consen 292 RLSEKLLASALECDSKASCSLVLCGFSSAETEIKDTNKEFLKGLDNSNSKLKSPDNSVKFVIILGSEEDILVADDSPNFD 371 (649)
T ss_pred HHHHHHHHhhhccccccCceeEEeeccccchhhhhhHHHHHHhhhhhhhhccCCCcceeEEEEeccccccccccCCCCcC
Confidence 34444455555555 67999999999999988 888877766 9999998 89999988863 468999
Q ss_pred HHHHHhcccccccCCcEEEcccCCcHHHHHHHhcCCCC--cceEEEeCcccccccCCCCeeecCCCCceeEEEeecCCC-
Q 021912 96 VELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCELP--VGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDG- 172 (305)
Q Consensus 96 ~~~~~~~L~t~~~G~~i~~~~~v~STn~~~~~~~~~~~--~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~- 172 (305)
.+.||+++.++++|+.++|.|+++|||+++..+..++| .|.+|+|++||+||||+||.|.||.||++||+.+.++..
T Consensus 372 l~lY~k~i~tk~~G~~ll~a~V~tST~~ild~n~s~lpse~g~vvv~~~Q~sGRGRGgN~WlsP~G~~~~sf~ism~~ks 451 (649)
T KOG1536|consen 372 LELYFKSINTKRFGRVLLWAPVLTSTMDILDHNFSELPSEVGLVVVANIQTSGRGRGGNVWLSPKGCAMSSFTISMPLKS 451 (649)
T ss_pred HHHHHHHhhhhccCceEEEEeecchHHHHHhhhhhcCCcccceEEEEeEEeecccCCCCeeecCcceEeEEEEEEeeccc
Confidence 99999999999999999999999999999999988888 899999999999999999999999999999999987633
Q ss_pred ---CCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECC-EEEEEeeeeeeecCCceEEEEeeccCCCCCCc
Q 021912 173 ---RVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNG-IKVGGILCTSTYRTKKFNVSIGIGLNVNNEEP 248 (305)
Q Consensus 173 ---~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~g-kKigGILiE~~~~~~~~~vvIGIGINvn~~~p 248 (305)
..++++++++.+|++++++.. .|+|+++++||||||||+++ .||||||+.+.+.++.+.++|||||||.|..|
T Consensus 452 r~~~~i~~~~~l~~~~~v~~~~~~---pGy~dIpvrIKWPNDlY~~~~lKvgGiLv~st~r~n~f~v~iGCGiNVtN~~P 528 (649)
T KOG1536|consen 452 RVVPLIPFVQHLALVAVVEAVRYA---PGYPDIPVRIKWPNDLYVNGYLKVGGILVTSTYRSNKFNVSIGCGINVTNDGP 528 (649)
T ss_pred ccccchHHHHHHHHHHHHHHHhcC---CCCCCCceeeecCccceeeeccccceEEEEeeecCceEEEEEeeeeEecCCCC
Confidence 345566677777777776653 59999999999999999999 99999999999999999999999999999999
Q ss_pred cchHHHHHHhhhcCC----CCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCC
Q 021912 249 TTCLNAVLRKLSDST----YQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHR 305 (305)
Q Consensus 249 ~~sl~~~~~~~~~~~----~~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlHs 305 (305)
++|||+.+.++++.. ..+.+|+|+|++++.||+++..|+++||+.++++||++||||
T Consensus 529 T~cLN~ll~~~n~e~~~~~l~~k~EkLiA~~~n~fe~~~k~f~d~G~~silp~YYeyWLHS 589 (649)
T KOG1536|consen 529 TTCLNDLLDEMNEERNLLHLAIKAEKLIAAVFNKFEKYFKLFMDQGPKSILPLYYEYWLHS 589 (649)
T ss_pred ceeHHHHHHhhchhhccccchhhHHHHHHHHHHHHHHHHHHHHhhCHHhHhHHHHHHHhcc
Confidence 999999998877543 246899999999999999999999999999999999999998
No 2
>PRK06955 biotin--protein ligase; Provisional
Probab=100.00 E-value=8.3e-49 Score=371.19 Aligned_cols=210 Identities=27% Similarity=0.323 Sum_probs=172.1
Q ss_pred CCCCHHHHHhcccccccCCcEEEcccCCcHHHHHHHhcCC-------CCcceEEEeCcccccccCCCCeeecCCC-Ccee
Q 021912 92 ESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCE-------LPVGAVCVADVQFKGRGRSKNAWESPKG-CLMF 163 (305)
Q Consensus 92 ~~fd~~~~~~~L~t~~~G~~i~~~~~v~STn~~~~~~~~~-------~~~gtvviA~~QTaGRGR~gr~W~Sp~G-~L~f 163 (305)
=.++.+.+...+.+..+|..++++++++|||+++++.... .++|+||+|++||+||||+||+|+||+| +|||
T Consensus 15 ~~l~~~~i~~~~~~~~~~~~i~~~~~v~STN~~a~~~~~~~~~~~~~~~~g~vvvA~~QTaGRGR~GR~W~Sp~G~~L~~ 94 (300)
T PRK06955 15 WRIDRDRLDAHLAAAARAWPLEIVEETGSTNADLMARLKALPRSADALPAPIVRVAYEQTAGRGRQGRPWFAQPGNALLF 94 (300)
T ss_pred CCCCHHHHHhhcccccCCceEEEEeCCCCHHHHHHHHHHhcccccccCCCCeEEEECccccCCCCCcCcccCCCCCcEEE
Confidence 4688999999997766788899999999999999765332 4789999999999999999999999999 6999
Q ss_pred EEEeecC-CCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCc-eEEEEeecc
Q 021912 164 SFTIQME-DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKK-FNVSIGIGL 241 (305)
Q Consensus 164 S~~l~~~-~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~-~~vvIGIGI 241 (305)
|++++++ ....++.+++++|+||+++|++++.+. +.+++||||||||++||||||||+|....++. ..+||||||
T Consensus 95 Si~l~~~~~~~~~~~Lsl~~glAv~~al~~~~~~~---~~~~~iKWPNDIl~~gkKiaGILiE~~~~~~~~~~vVIGIGI 171 (300)
T PRK06955 95 SVACVLPRPVAALAGLSLAVGVALAEALAALPAAL---GQRIALKWPNDLLIAGRKLAGILIETVWATPDATAVVIGIGL 171 (300)
T ss_pred EeEecCCCChHHhhhHHHHHHHHHHHHHHHhhccc---CCceeeeCCceeeECCcEEEEEEEEcccCCCCccEEEEEEEE
Confidence 9999875 445567899999999999999874322 25799999999999999999999998876554 469999999
Q ss_pred CCCCCCc----cchHHHH---------HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Q 021912 242 NVNNEEP----TTCLNAV---------LRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLH 304 (305)
Q Consensus 242 Nvn~~~p----~~sl~~~---------~~~~~~~~~~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlH 304 (305)
||++..+ .++|+.. ...+...+..++|++|++.++++|++.|..|.+.||++++++|+++++|
T Consensus 172 Nv~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ll~~ll~~l~~~~~~~~~~g~~~~~~~~~~~~~~ 247 (300)
T PRK06955 172 NVRRADAVAAEVDALRAREAALARGLPPVALAAACAGANLTDTLAAALNALAPALQAFGADGLAPFAARWHALHAY 247 (300)
T ss_pred eeCCCccccccccccccccccccccccchhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhhc
Confidence 9997532 1112110 0001113567899999999999999999999999999999999998876
No 3
>TIGR00121 birA_ligase birA, biotin-[acetyl-CoA-carboxylase] ligase region. The protein name suggests that this enzyme transfers biotin only to acetyl-CoA-carboxylase but it also transfers the biotin moiety to other proteins. The apparent orthologs among the eukaryotes are larger proteins that contain a single copy of this domain.
Probab=100.00 E-value=1.7e-48 Score=357.10 Aligned_cols=186 Identities=30% Similarity=0.482 Sum_probs=156.7
Q ss_pred EEEcccCCcHHHHHHHhcCC-CCcceEEEeCcccccccCCCCeeecCCCCceeEEEeecC-CCCCchhHHHHHHHHHHHH
Q 021912 112 LIWSPRLPSTHDVVSHNFCE-LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQME-DGRVVPLLQYVASLALTEA 189 (305)
Q Consensus 112 i~~~~~v~STn~~~~~~~~~-~~~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~-~~~~l~~ls~~~~lAV~~a 189 (305)
++++++++|||+++++++.. .++|+||+|++||+||||+||+|+||+|+||||++++++ +...++.+++++|+||+++
T Consensus 2 i~~~~~~~STn~~~~~~~~~~~~~~~vv~A~~QTaGRGR~gr~W~Sp~g~l~~S~~l~~~~~~~~~~~ls~~~~lAv~~a 81 (237)
T TIGR00121 2 VIVLDVIDSTNQYALELAKEGKLKGDLVVAEYQTAGRGRRGRKWLSPEGGLYFSLILRPDLPKSPAPGLTLVAGIAIAEV 81 (237)
T ss_pred EEEEeecCCHHHHHHHHHhcCCCCCeEEEEcccCCCCCCCCCcccCCCCceEEEEEECCCCChhHhhhhHHHHHHHHHHH
Confidence 67899999999999987654 358999999999999999999999999999999999876 4456778999999999999
Q ss_pred HHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCc-eEEEEeeccCCCCCCccchHHH-HHHhhhcCCCCCC
Q 021912 190 INYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKK-FNVSIGIGLNVNNEEPTTCLNA-VLRKLSDSTYQFR 267 (305)
Q Consensus 190 L~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~-~~vvIGIGINvn~~~p~~sl~~-~~~~~~~~~~~i~ 267 (305)
|++++ .+++||||||||++|+||||||+|....++. ..+||||||||+++.++..+.. ..+.....+..++
T Consensus 82 l~~~~-------~~~~iKWPNDI~~~~kKi~GIL~E~~~~~~~~~~vviGIGiNv~~~~~~~~~~~~a~sl~~~~~~~~~ 154 (237)
T TIGR00121 82 LKELG-------DQVQVKWPNDILLKDKKLGGILTELTGKENRADYVVIGIGINVQNRKPAESLREQAISLSEEAGIDLD 154 (237)
T ss_pred HHHhC-------CCCCCcCCceEEECCeEEEEEEEEcccCCCCcCEEEEEEEEccCCCCCchhhcccceehHHhhCCCCC
Confidence 99863 4699999999999999999999998765544 5699999999997644332222 1111112357899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Q 021912 268 REDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLH 304 (305)
Q Consensus 268 r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlH 304 (305)
|++|++.++++|+.+|..|.+.||++++++|++++++
T Consensus 155 ~~~ll~~l~~~l~~~~~~~~~~g~~~~~~~~~~~~~~ 191 (237)
T TIGR00121 155 RGELIEGFLRNFEENLEWFEQEGIDEILSKWEKLSAH 191 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999988764
No 4
>COG0340 BirA Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-47 Score=352.19 Aligned_cols=183 Identities=32% Similarity=0.559 Sum_probs=157.6
Q ss_pred cccCCcHHHHHHHhcC-CCCcceEEEeCcccccccCCCCeeecCCC-CceeEEEeecC-CCCCchhHHHHHHHHHHHHHH
Q 021912 115 SPRLPSTHDVVSHNFC-ELPVGAVCVADVQFKGRGRSKNAWESPKG-CLMFSFTIQME-DGRVVPLLQYVASLALTEAIN 191 (305)
Q Consensus 115 ~~~v~STn~~~~~~~~-~~~~gtvviA~~QTaGRGR~gr~W~Sp~G-~L~fS~~l~~~-~~~~l~~ls~~~~lAV~~aL~ 191 (305)
+++++|||+++++++. ..+.+++|+|++||+||||+||.|.||+| +||||++++++ +...++.+++++|+||++||+
T Consensus 1 ~~~i~STn~~a~~~~~~~~~~~~vvvA~~QTaGRGR~GR~W~Sp~G~~l~~S~~l~~~~~~~~~~~lsl~~g~av~~al~ 80 (238)
T COG0340 1 FDEIDSTNTEAKERAASGAPEGTVVVAEEQTAGRGRRGRKWSSPKGGGLYMSLLLRPDLPPAELPSLSLVAGLAVAEALR 80 (238)
T ss_pred CCccchHHHHHHHHHHhCCCCCcEEEEeeeccCcCCCCCcccCCCCCCEEEEEEEcCCcChhhcchhHHHHHHHHHHHHH
Confidence 4789999999998864 57788899999999999999999999998 89999999887 446788999999999999999
Q ss_pred HhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCC-ceEEEEeeccCCCCCCcc-chHHHHHHhhhcCCCCCCHH
Q 021912 192 YVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTK-KFNVSIGIGLNVNNEEPT-TCLNAVLRKLSDSTYQFRRE 269 (305)
Q Consensus 192 ~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~-~~~vvIGIGINvn~~~p~-~sl~~~~~~~~~~~~~i~r~ 269 (305)
++. .+++||||||||++|+|+||||+|+....+ ...+||||||||++..|+ ..+.+....+......++|+
T Consensus 81 ~~~-------~~~~iKWPNDv~~~~kKl~GIL~E~~~~~~~~~~~viGIGINv~~~~~~~~~i~~~atsL~~~~~~~~r~ 153 (238)
T COG0340 81 KFG-------IDVRIKWPNDVLLNGKKLAGILVEAVGDENGLLAVVVGIGINVNNPPPDFEDIGQPATSLQEEGEEIDRE 153 (238)
T ss_pred HhC-------cccCccCCcceeECCcceEEEEEeeeecCCCceEEEEEEEEeeccCCcchhhhhhhhhhHHhhhCCCCHH
Confidence 874 589999999999999999999999987655 467999999999987653 12322222222222689999
Q ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Q 021912 270 DVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLH 304 (305)
Q Consensus 270 eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlH 304 (305)
+|++.++++|+.+|.+|.+.||.+|++.|+++++|
T Consensus 154 ~l~~~ll~~l~~~~~~~~~~~~~~i~~~~~~~~~~ 188 (238)
T COG0340 154 ELLAKLLKELEKYLRQFLREGFAPILARWRARSLS 188 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHhcc
Confidence 99999999999999999999999999999999986
No 5
>PRK08330 biotin--protein ligase; Provisional
Probab=100.00 E-value=2.4e-46 Score=342.84 Aligned_cols=184 Identities=28% Similarity=0.433 Sum_probs=152.6
Q ss_pred cCCcEEEcccCCcHHHHHHHhcCCCCcceEEEeCcccccccCCCCeeecCCCCceeEEEeecC-CCCCchhHHHHHHHHH
Q 021912 108 FGRLLIWSPRLPSTHDVVSHNFCELPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQME-DGRVVPLLQYVASLAL 186 (305)
Q Consensus 108 ~G~~i~~~~~v~STn~~~~~~~~~~~~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~-~~~~l~~ls~~~~lAV 186 (305)
+|+.++++++++|||+++++.....++|++|+|++||+||||+||+|+||+|+||||++++++ ....++.+++++++||
T Consensus 1 ~g~~i~~~~~v~STn~~~~~~~~~~~~~~vv~A~~QT~GrGR~gr~W~Sp~G~l~~S~~l~~~~~~~~~~~l~~~~~~av 80 (236)
T PRK08330 1 IGRNIIYFDEVDSTNEYAKRIAPDEEEGTVIVADRQTAGHGRKGRAWASPEGGLWMSVILKPKVSPEHLPKLVFLGALAV 80 (236)
T ss_pred CCceEEEEcccCcHHHHHHHHhcCCCCCEEEEECccccCCCCCCCeeeCCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 378899999999999999988767789999999999999999999999999999999999875 3445678899999999
Q ss_pred HHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEEeeccCCCCCCccchHHHHHHhhhcCCCCC
Q 021912 187 TEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVLRKLSDSTYQF 266 (305)
Q Consensus 187 ~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvIGIGINvn~~~p~~sl~~~~~~~~~~~~~i 266 (305)
+++|+++ | +++++|||||||++|+|+||||+|... ..++|||||||+++.|......+.+.....+..+
T Consensus 81 ~~~l~~~----g---~~~~iKWPNDI~~~~kKi~GILiE~~~----~~~viGiGiNv~~~~p~~l~~~atsL~~~~~~~~ 149 (236)
T PRK08330 81 VDTLREF----G---IEGKIKWPNDVLVNYKKIAGVLVEGKG----DFVVLGIGLNVNNEIPDELRETATSMKEVLGREV 149 (236)
T ss_pred HHHHHHc----C---CCccccCCCeEEECCeEEEEEeEEEeC----CEEEEEEEEecCCCCCcccccccccHHHhhCCCC
Confidence 9999975 3 578999999999999999999999762 2589999999997555321111111111225678
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcC
Q 021912 267 RREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWL 303 (305)
Q Consensus 267 ~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~Wl 303 (305)
+++++++.++++|++.|..|.+++ +++.++|+++++
T Consensus 150 ~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~ 185 (236)
T PRK08330 150 PLIEVFKRLVENLDRWYKLFLEGP-GEILEEVKGRSM 185 (236)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHH
Confidence 999999999999999999998866 899999987543
No 6
>PRK11886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional
Probab=100.00 E-value=5.9e-46 Score=353.31 Aligned_cols=203 Identities=28% Similarity=0.437 Sum_probs=168.7
Q ss_pred CCCCHHHHHhcccccccCCcEEEcccCCcHHHHHHHhcCCCCcceEEEeCcccccccCCCCeeecCCC-CceeEEEeecC
Q 021912 92 ESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCELPVGAVCVADVQFKGRGRSKNAWESPKG-CLMFSFTIQME 170 (305)
Q Consensus 92 ~~fd~~~~~~~L~t~~~G~~i~~~~~v~STn~~~~~~~~~~~~gtvviA~~QTaGRGR~gr~W~Sp~G-~L~fS~~l~~~ 170 (305)
..+++..+...+. |..++++++++|||+++++.+.+.++|+||+|++||+||||+||+|.||+| +||||++++++
T Consensus 64 ~~l~~~~l~~~l~----~~~i~~~~~v~STn~~~~e~~~~~~~~~vv~A~~Qt~GrGR~gr~W~Sp~g~~L~~S~~~~~~ 139 (319)
T PRK11886 64 DLLDPERISSQLP----PGRVTVLPVIDSTNQYLLDRIAELKSGDLCLAEYQTAGRGRRGRQWFSPFGGNLYLSLYWRLN 139 (319)
T ss_pred ccCCHHHHHhhCC----CCeEEEEeCCCCHHHHHHHhhcCCCCCcEEEECccCCCCCCCCCcccCCCCCCEEEEEEeCCC
Confidence 5688888776653 567899999999999999877667899999999999999999999999999 59999999876
Q ss_pred -CCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCC-ceEEEEeeccCCCCCCc
Q 021912 171 -DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTK-KFNVSIGIGLNVNNEEP 248 (305)
Q Consensus 171 -~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~-~~~vvIGIGINvn~~~p 248 (305)
....++.+++++|+||+++|++++ ..+++||||||||++|+|+||||+|....++ ...+|||||||||++.+
T Consensus 140 ~~~~~~~~l~l~~~~av~~al~~~~------~~~~~iKWPNDI~~~~kKl~GIL~E~~~~~~~~~~~viGIGiNv~~~~~ 213 (319)
T PRK11886 140 QGPAQAMGLSLVVGIAIAEALRRLG------AIDVGLKWPNDIYLNDRKLAGILVELSGETGDAAHVVIGIGINVAMPDF 213 (319)
T ss_pred CChHHHhhHHHHHHHHHHHHHHHhc------CCCcceeCCceeeECCeeEEEEEEEeccCCCCccEEEEEEEEccCCCCC
Confidence 344567889999999999999874 2478999999999999999999999876544 35699999999997532
Q ss_pred cch-HHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Q 021912 249 TTC-LNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLH 304 (305)
Q Consensus 249 ~~s-l~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlH 304 (305)
... +......+...+..++|++|++.++++|+.+|..|.+.||++++++|+++|+|
T Consensus 214 ~~~~~~~~~~sl~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (319)
T PRK11886 214 PEELIDQPWSDLQEAGPTIDRNQLAAELIKQLRAALELFEQEGLAPFLERWKKLDLF 270 (319)
T ss_pred chhhhccceeeHhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccc
Confidence 211 21111112222568999999999999999999999999999999999999876
No 7
>PTZ00276 biotin/lipoate protein ligase; Provisional
Probab=100.00 E-value=2.3e-45 Score=338.80 Aligned_cols=185 Identities=26% Similarity=0.383 Sum_probs=147.0
Q ss_pred ccCCcEEEcccCCcHHHHHHHhcCC-CCcceEEEeCcccccccCCCCeeecCCCCceeEEEeecC--CCCCchhHHHHHH
Q 021912 107 RFGRLLIWSPRLPSTHDVVSHNFCE-LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQME--DGRVVPLLQYVAS 183 (305)
Q Consensus 107 ~~G~~i~~~~~v~STn~~~~~~~~~-~~~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~--~~~~l~~ls~~~~ 183 (305)
..|..++++++++|||+++++.... ..+|++|+|++||+||||+||+|.||+|+||||++++++ +....+++++++|
T Consensus 4 ~~~~~i~~~~~v~STN~~ak~~~~~~~~~~~vviA~~QT~GRGR~gR~W~Sp~g~l~~S~~l~~~~~~~~~~~~lsl~~a 83 (245)
T PTZ00276 4 DVPPNIHFVGEVTSTMDVARTMLAAAGGKPFAVLAESQTAGRGTGGRTWTSPKGNMYFTLCIPQKGVPPELVPVLPLITG 83 (245)
T ss_pred CCCceEEEEeCCCCHHHHHHHHHhcCCCCCeEEEECCCCCCCCCCCCcccCCCCCeEEEEEECCCccChhHhhHHHHHHH
Confidence 3577899999999999999987543 467899999999999999999999999999999999754 3344678999999
Q ss_pred HHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEEeeccCCCCCC-------ccchHHHHH
Q 021912 184 LALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEE-------PTTCLNAVL 256 (305)
Q Consensus 184 lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvIGIGINvn~~~-------p~~sl~~~~ 256 (305)
+|++++|++++. +++++||||||||++|||+||||+|+..+ .+||||||||+... +.++++...
T Consensus 84 lav~~al~~~~~-----~~~~~iKWPNDI~~~~kKiaGILiE~~~~----~vvIGIGINv~~~~~~~~~~~~~~~l~sl~ 154 (245)
T PTZ00276 84 LACRAAIMEVLH-----GAAVHTKWPNDIIYAGKKIGGSLIESEGE----YLIIGIGMNIEVAPPVTDAGRESTMVNEIA 154 (245)
T ss_pred HHHHHHHHHhcc-----CCceEEEcCCeeEECCcEEEEEEEcccCC----EEEEEEEEeeCCCCCCCccccccccHHHHH
Confidence 999999998742 36899999999999999999999997642 68999999998631 222332221
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHH---HhcC
Q 021912 257 RKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYY---KTWL 303 (305)
Q Consensus 257 ~~~~~~~~~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~---~~Wl 303 (305)
.+. .+..++|++|++.++++|+++|..+. .+++++.+.|. .+|+
T Consensus 155 ~~~--~~~~~~r~~l~~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 201 (245)
T PTZ00276 155 EDL--GVKSVTPQDLAEAVWKHFFDICSDPE-LTREILIESFDAAMDKSL 201 (245)
T ss_pred Hhh--CCCCCCHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHhhhh
Confidence 111 23579999999999999999886542 23467888775 5554
No 8
>PRK13325 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/pantothenate kinase; Reviewed
Probab=100.00 E-value=1.4e-44 Score=369.09 Aligned_cols=204 Identities=24% Similarity=0.371 Sum_probs=168.6
Q ss_pred CCCCCHHHHHhcccccccCCcEEEcccCCcHHHHHHHhcC---CCCcceEEEeCcccccccCCCCeeecCCC-CceeEEE
Q 021912 91 QESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHNFC---ELPVGAVCVADVQFKGRGRSKNAWESPKG-CLMFSFT 166 (305)
Q Consensus 91 ~~~fd~~~~~~~L~t~~~G~~i~~~~~v~STn~~~~~~~~---~~~~gtvviA~~QTaGRGR~gr~W~Sp~G-~L~fS~~ 166 (305)
...+|.+.+.+.|.+. +..+.++++++|||+++++.+. ..++|+||+|++||+||||+||+|+||+| +||||++
T Consensus 65 ~~lL~~~~I~~~l~~~--~~~i~~~~~idSTN~~~~~~~~~~~~~~~g~vvvAe~QTaGRGRrGR~W~Sp~G~~Ly~S~~ 142 (592)
T PRK13325 65 LAVFDAEGLRELGERS--GFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFG 142 (592)
T ss_pred cccCCHHHHHHhhhcC--CCcEEEEeCCCCHHHHHHHHHhhccCCCCCeEEEECccCCCCCCCCCcccCCCCCcEEEEee
Confidence 4779999999999644 6778999999999999998643 25789999999999999999999999999 6999999
Q ss_pred eecC-CCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEEeeccCCCC
Q 021912 167 IQME-DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNN 245 (305)
Q Consensus 167 l~~~-~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvIGIGINvn~ 245 (305)
++++ ....+..+++++|+||+++|+++ | ++++||||||||++|||+||||+|....++...+||||||||++
T Consensus 143 l~~~~~~~~~~~Lsl~vgvAv~~aL~~~----g---~~v~lKWPNDIl~~gkKlaGILiE~~~~~~~~~vVIGIGINv~~ 215 (592)
T PRK13325 143 WVFDRPQYELGSLSPVAAVACRRALSRL----G---LKTQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVL 215 (592)
T ss_pred ecCCCChhhhhhHHHHHHHHHHHHHHHc----C---CCceEeCcceEEECCceEEEEEEeeeecCCCcEEEEEEEEeeCC
Confidence 9876 34567789999999999999974 3 47999999999999999999999988555556799999999986
Q ss_pred CCc---cchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Q 021912 246 EEP---TTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLH 304 (305)
Q Consensus 246 ~~p---~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlH 304 (305)
+.. ..++... .........++|+++++.++++|++.|..|.+.||++|+++|.+++++
T Consensus 216 p~~~~~~~~~~sL-~~~~~~~~~~dr~~ll~~ll~~l~~~l~~~~~~g~~~~~~~w~~~~~~ 276 (592)
T PRK13325 216 PKEVENAASVQSL-FQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRD 276 (592)
T ss_pred CcccccCcChHHH-HhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhhcc
Confidence 321 1111111 111111246899999999999999999999999999999999987654
No 9
>PTZ00275 biotin-acetyl-CoA-carboxylase ligase; Provisional
Probab=100.00 E-value=1.4e-44 Score=340.38 Aligned_cols=192 Identities=23% Similarity=0.328 Sum_probs=153.7
Q ss_pred cccCCcEEEcccCCcHHHHHHHhc----C-CC--Ccce-EEEeCcccccccCC------CCeeecCCCCceeEEEeecC-
Q 021912 106 NRFGRLLIWSPRLPSTHDVVSHNF----C-EL--PVGA-VCVADVQFKGRGRS------KNAWESPKGCLMFSFTIQME- 170 (305)
Q Consensus 106 ~~~G~~i~~~~~v~STn~~~~~~~----~-~~--~~gt-vviA~~QTaGRGR~------gr~W~Sp~G~L~fS~~l~~~- 170 (305)
..+|..++|+++++|||++++++. . +. ++++ ||+|++||+||||+ ||+|+||+|+||||++++++
T Consensus 13 ~~~~~~~~~~~~v~STN~~a~~~~~~~~~~g~~~~~~~~vv~A~~QT~GRGR~~~~~~~gR~W~Sp~G~L~~S~~l~~~~ 92 (285)
T PTZ00275 13 PELNALRLHFDVLDSTQLYCKRNMKRFIQNGKLQDDNMIIVSCNEQTNGIGTRDTKKNQDRIWLSEKGNLFTTFVFLWNR 92 (285)
T ss_pred hhcCcEEEEEcccCcHHHHHHHhHHHHhhcCCcCCCCeEEEEECcccCCCCcCCCCCCCCCEEECCCCceEEEEEEecCC
Confidence 357889999999999999998853 2 22 4664 66799999999997 99999999999999999654
Q ss_pred -CCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecC------C-ceEEEEeeccC
Q 021912 171 -DGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRT------K-KFNVSIGIGLN 242 (305)
Q Consensus 171 -~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~------~-~~~vvIGIGIN 242 (305)
.....+.+++++|+||+++|+.+ + ++++||||||||++||||||||+|..... + ...+|||||||
T Consensus 93 ~~~~~~~~Lsl~~alAv~~~L~~~----~---~~~~IKWPNDI~~~~kKiaGILiE~~~~~~~~~~~~~~~~vViGIGIN 165 (285)
T PTZ00275 93 NDIEKVKYLAQTCTVAISKTLEYF----H---LVTQIKWINDVLVNYKKIAGCLVHLYYLDDFPNLNSRYVCVMVGIGIN 165 (285)
T ss_pred cCHhHhHHHHHHHHHHHHHHHHHh----C---CceeEECCCccccCCcEEEEEEEeeeeccccccccCceeEEEEEEEEe
Confidence 33456789999999999999874 2 47999999999999999999999987532 2 34699999999
Q ss_pred CCCCCc-------cchHHHHHHh-hhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Q 021912 243 VNNEEP-------TTCLNAVLRK-LSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLH 304 (305)
Q Consensus 243 vn~~~p-------~~sl~~~~~~-~~~~~~~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~WlH 304 (305)
||+..+ .++|...... ....+...++++|++.++++|+..|..|.+.||+++.++|.++++|
T Consensus 166 vn~~~~~~~~~~~atSL~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~~~~~~g~~~i~~~~~~~~~~ 235 (285)
T PTZ00275 166 VTLEDKHNLLNNNYTSIKKELQRDFNTPKSIPSVEQVTEKLIINLKAVINKLRKEGFSSFLDYITPRLLY 235 (285)
T ss_pred cCCCCCcccccCCcccHHHHhCcccccccCCCCHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHhcc
Confidence 987532 2455432210 0011224579999999999999999999999999999999988765
No 10
>PRK08477 biotin--protein ligase; Provisional
Probab=100.00 E-value=1.2e-43 Score=320.86 Aligned_cols=165 Identities=27% Similarity=0.457 Sum_probs=134.2
Q ss_pred cEEEcccCCcHHHHHHHhcCC--CCcceEEEeCcccccccCCCCeeecCCCCceeEEEeecCC-CCCch--hHHHHHHHH
Q 021912 111 LLIWSPRLPSTHDVVSHNFCE--LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMED-GRVVP--LLQYVASLA 185 (305)
Q Consensus 111 ~i~~~~~v~STn~~~~~~~~~--~~~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~-~~~l~--~ls~~~~lA 185 (305)
.++++++++|||+++++.... .++|++|+|++||+||||+||+|.||+|+||||++++++. ....+ .+++++|+|
T Consensus 2 ~i~~~~~v~STn~~~~~~~~~~~~~~~~vvvA~~QTaGRGR~gR~W~Sp~G~L~~S~~l~~~~~~~~~~~~~lsl~~~~a 81 (211)
T PRK08477 2 EIRVFESLDSTQTYLIEKIKNGELKAPFAIVAKEQTAGIGSRGNSWEGKKGNLFFSFALKESDLPKDLPLQSSSIYFGFL 81 (211)
T ss_pred eEEEecCCCCHHHHHHHHHHcCCCCCCEEEEECccCCCCCCCCCcccCCCCCeEEEeecCCCcchhhhhhHHHHHHHHHH
Confidence 468899999999999987542 4789999999999999999999999999999999998752 23333 378899999
Q ss_pred HHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEEeeccCCCCCCcc-chHHHHHHhhhcCCC
Q 021912 186 LTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEEPT-TCLNAVLRKLSDSTY 264 (305)
Q Consensus 186 V~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvIGIGINvn~~~p~-~sl~~~~~~~~~~~~ 264 (305)
|+++++++ | .+++||||||||++|+|+||||+|.... .+||||||||++.++. +++ +.
T Consensus 82 v~~~l~~~----~---~~~~iKWPNDI~~~~kKi~GIL~E~~~~----~vviGiGiNv~~~p~~~~~l----------~~ 140 (211)
T PRK08477 82 LKEVLKEL----G---SKVWLKWPNDLYLDDKKIGGVITNKIKN----FIVCGIGLNLKFSPKNFACL----------DI 140 (211)
T ss_pred HHHHHHHh----C---CCeEEcCCCeeEECCcEEEEEEEeecCC----eEEEEEEEeeCCCCCccccc----------cC
Confidence 99999874 2 4799999999999999999999997532 5899999999864321 111 35
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhc
Q 021912 265 QFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTW 302 (305)
Q Consensus 265 ~i~r~eLla~il~~fe~~~~~~~~~gf~~l~~~Y~~~W 302 (305)
.++|++|++.++++|++.|. +..+.+.|+..|
T Consensus 141 ~~~~~~ll~~l~~~~~~~~~------~~~~~~~~~~~~ 172 (211)
T PRK08477 141 EISDDLLLEGFLQKIEKKIL------WKQIFSKYKLEF 172 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHh------HHHHHHHHHHHH
Confidence 78999999999999999983 234555666555
No 11
>PRK05935 biotin--protein ligase; Provisional
Probab=100.00 E-value=3.5e-42 Score=306.88 Aligned_cols=161 Identities=23% Similarity=0.317 Sum_probs=128.1
Q ss_pred EEcccCCcHHHHHHHhcCC--CCcceEEEeCcccccccCCCCeeecCCCCceeEEEeecCC-CCCchhHHHHHHHHHHHH
Q 021912 113 IWSPRLPSTHDVVSHNFCE--LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMED-GRVVPLLQYVASLALTEA 189 (305)
Q Consensus 113 ~~~~~v~STn~~~~~~~~~--~~~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~-~~~l~~ls~~~~lAV~~a 189 (305)
+++++++|||+++++++.. .+++++|+|++||+||||+||+|+||+|+||||++++++. ......+..++++|++++
T Consensus 6 ~~~~~v~STN~~~~~~~~~~~~~~~~vv~A~~QTaGRGR~GR~W~Sp~G~L~~Si~l~~~~~~~~~~~~~~l~~~av~~~ 85 (190)
T PRK05935 6 YEIAETPSTNTTAKEGMHLWDPYALTVISTREQTAGKGKFGKSWHSSDQDLLASFCFFITVLNIDVSLLFRLGTEAVMRL 85 (190)
T ss_pred EeCCCCCcHHHHHHHHHhcCCCCCCEEEEECccCCCCCCCCCeeeCCCCCeEEEEEEccCCCCcCHHHHHHHHHHHHHHH
Confidence 3458999999999987532 3468999999999999999999999999999999996542 122344555667899999
Q ss_pred HHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEEeeccCCCCCC--------ccchHHHHHHhhhc
Q 021912 190 INYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEE--------PTTCLNAVLRKLSD 261 (305)
Q Consensus 190 L~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvIGIGINvn~~~--------p~~sl~~~~~~~~~ 261 (305)
++++. . .+++||||||||++|+|+||||+|....++...+||||||||++.. +.+++...
T Consensus 86 l~~~~----~--~~~~iKWPNDI~~~~kKi~GILiE~~~~~~~~~vVIGIGINv~~~~~~~~~~~~~atsL~~~------ 153 (190)
T PRK05935 86 GEDLG----I--TEAVIKWPNDVLVHGEKLCGVLCETIPVKGGLGVILGIGVNGNTTKDELLGIDQPATSLQEL------ 153 (190)
T ss_pred HHHhC----C--ccccccCCCeEEECCcEEEEEEEeccccCCCcEEEEEEeEecCCCchhccccCCCcccHHHh------
Confidence 98752 1 2699999999999999999999998765555569999999998641 23444322
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q 021912 262 STYQFRREDVIAAFFNKFETFYDT 285 (305)
Q Consensus 262 ~~~~i~r~eLla~il~~fe~~~~~ 285 (305)
.+..++|+++++.++++|+..|..
T Consensus 154 ~~~~~~~~~l~~~l~~~l~~~~~~ 177 (190)
T PRK05935 154 LGHPIDLEEQRERLIKHIKHVLIQ 177 (190)
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999998865
No 12
>PF03099 BPL_LplA_LipB: Biotin/lipoate A/B protein ligase family This entry is just a subset of the Pfam family; InterPro: IPR004143 This domain is found in biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organism probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine []. Lipoate-protein ligase A (LPLA) (octanoyltransferase) catalyses the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes [].; GO: 0003824 catalytic activity, 0006464 protein modification process; PDB: 2ARU_A 2C8M_B 2C7I_A 3R07_A 2ARS_A 2ART_A 3FJP_A 3EFR_B 2EAY_B 3EFS_B ....
Probab=99.88 E-value=7e-23 Score=167.80 Aligned_cols=120 Identities=39% Similarity=0.564 Sum_probs=89.5
Q ss_pred EcccCCcH-HHHHHHhcCCCCcceEEEeCcccccccCCCCeeecCCCCceeEEEeecCCC----CCchhHHHHHHHHHHH
Q 021912 114 WSPRLPST-HDVVSHNFCELPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDG----RVVPLLQYVASLALTE 188 (305)
Q Consensus 114 ~~~~v~ST-n~~~~~~~~~~~~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~----~~l~~ls~~~~lAV~~ 188 (305)
+.++++|| .....+ ..+.+.++++++||+|| |.|+||+|+++||++++.+.. ..++.+...+.+++.+
T Consensus 1 ~g~~~~st~~~~~~~---~~~~~~v~v~~rqtgG~----~~w~~p~g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (125)
T PF03099_consen 1 IGYFQDSTKEELNQE---ELKEGGVPVARRQTGGR----RVWHSPPGNLYFSLILPPDDPNFPPSDIPSYILLAALAVLE 73 (125)
T ss_dssp EETTBSHHHHHHHHH---HHHCTTEEEEEESSSSB----EEEEBTTTEEEEEEEEETTTTTHHGGGHHHHHHHHHHHHHH
T ss_pred CcCeECHHHHHHHHh---cCccCCEEEEEEeeCCc----ceeeeCCcEEEEEEEEccccccccchhhhHHHHHHHHHHHH
Confidence 35788999 333332 35567889999999999 999999999999999986531 2344556667777777
Q ss_pred HHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEEeeccC
Q 021912 189 AINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLN 242 (305)
Q Consensus 189 aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvIGIGIN 242 (305)
++..+. .+.++..+.+||||||++++|||||||+|.........++||||+|
T Consensus 74 ~l~~~~--~~~~~~~~~~kw~nDi~~~~kKi~Gil~~~~~~~~~~~~~igig~N 125 (125)
T PF03099_consen 74 ALGEFG--PGEPGIDCFIKWPNDIYVNGKKIAGILQERRRGGILHHGSIGIGIN 125 (125)
T ss_dssp HHHHTT--HTTTTSSEEEETTTEEEETTEEEEEEEEEEETTEEEEEEEEESSEE
T ss_pred Hhhhhc--cccCCCceEEeCCCCccCCCcEEEEEeEeeeCCcEEEEEEEEEecC
Confidence 775211 0234578999999999999999999999987633334677888876
No 13
>PRK14348 lipoate-protein ligase B; Provisional
Probab=95.70 E-value=0.21 Score=46.06 Aligned_cols=120 Identities=18% Similarity=0.123 Sum_probs=75.9
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHH--HHHHHHHHHHHhhhcCCCCCCcceeeecCcEEEC-----CEEEE
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYV--ASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLN-----GIKVG 220 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~--~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~-----gkKig 220 (305)
.|+|.....-||.|..-.++..... ....-.|+ .--++.+++++ +|.+ ..+.+..-.||++ ++|||
T Consensus 79 ~RGG~iTyHGPGQlV~Ypil~L~~~-~~~v~~yv~~lE~~vI~~l~~----~gi~--~~~~~~~~GVWv~~~~~~~~KIa 151 (221)
T PRK14348 79 DRGGDITYHGPGQLVCYPILNLEEF-GLGLKEYVHLLEEAVIRVCAS----YGVV--AGRLEKATGVWLEGDTSRARKIC 151 (221)
T ss_pred CCCCceEEECCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHH----cCCc--eeecCCCCCEEecCCCCCCCcEE
Confidence 6889999999998766667665421 12222222 23344555544 4542 2356778889997 58999
Q ss_pred EeeeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 021912 221 GILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYD 284 (305)
Q Consensus 221 GILiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~ 284 (305)
.|=+-..- . .-.=|+.|||+++. +.||+.+. .+..++.+++...+.++|.+.+.
T Consensus 152 aIGv~v~r--~--vT~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~~------~g~~~~~~~v~~~l~~~f~~~~~ 219 (221)
T PRK14348 152 AIGVRSSH--Y--VTMHGLALNVNTDLRYFSYIHPCGFIDKGVTSLQQE------LGHSIDMAEVKERLGRELLAALL 219 (221)
T ss_pred EEeEEecc--c--eeecceEEEecCChHHhccCccCCCCCCcEEeeHHH------hCCCCCHHHHHHHHHHHHHHHHc
Confidence 87665331 0 11248999998741 24566432 24578899999999999988754
No 14
>PRK14342 lipoate-protein ligase B; Provisional
Probab=94.14 E-value=1.2 Score=40.79 Aligned_cols=118 Identities=16% Similarity=0.209 Sum_probs=71.9
Q ss_pred ccCCCCeeecCCCCceeEEEeecCCCCCchhHHHHH--HHHHHHHHHHhhhcCCCCCCcceeeecC--cEEECCEEEEEe
Q 021912 147 RGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKIKWPN--DLYLNGIKVGGI 222 (305)
Q Consensus 147 RGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~G~~~~~v~IKWPN--DIyv~gkKigGI 222 (305)
-.|+|....--||.|..-.++..... ....-.|+. --++.+++++ +|. +..-+ |. -|+++++|||-|
T Consensus 69 ~~RGG~iTyHGPGQLV~YpIl~L~~~-~~~~~~yv~~lE~~vi~~l~~----~gi---~~~~~-~~~~GVWv~~~KIaaI 139 (213)
T PRK14342 69 SDRGGQVTYHGPGQLVMYVLLDLKRL-KLGVRQLVTAIEQTVINTLAE----YGI---EAHAK-PDAPGVYVDGKKIASL 139 (213)
T ss_pred ecCCCceEEECCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHH----cCC---ceeec-CCCCcCcccCCEEEEE
Confidence 36889999999998766666655421 122222322 2334444444 453 22222 22 467788999988
Q ss_pred eeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 021912 223 LCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYD 284 (305)
Q Consensus 223 LiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~ 284 (305)
=+-..- ..-.=|+.|||+++. ..||+.+. +..++.+++...+.++|.+.|.
T Consensus 140 Gv~v~r----~vT~HG~AlNv~~dL~~F~~IvPCGl~~~~vTSl~~~-------~~~~~~~~v~~~~~~~f~~~f~ 204 (213)
T PRK14342 140 GLRIRR----GCSFHGLALNVNMDLSPFLRINPCGYAGLEMTQLSDL-------GGPATVDEVAPRLLAELLALLG 204 (213)
T ss_pred EEeEec----ceeecceeEecCCCchhhCcEecCCCCCCcEeeHHHh-------CCCCCHHHHHHHHHHHHHHHhC
Confidence 776431 112358889998741 23556431 4578899999999999998774
No 15
>TIGR00214 lipB lipoate-protein ligase B. Involved in lipoate biosynthesis as the main determinant of the lipoyl-protein ligase activity required for lipoylation of enzymes such as alpha-ketoacid dehydrogenases. Involved in activation and re-activation (following denaturation) of lipoyl-protein ligases (calcium ion-dependant process).
Probab=93.91 E-value=1.8 Score=38.86 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=71.1
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHHH--HHHHHHHHHHhhhcCCCCCCcceeeecC--cEEECCEEEEEee
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKIKWPN--DLYLNGIKVGGIL 223 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~G~~~~~v~IKWPN--DIyv~gkKigGIL 223 (305)
.|+|....--||.|..-.++..... ....-.|+- --++.+++++ +|. +.. .-|. -||++++|||-|=
T Consensus 50 ~RGG~iTyHGPGQLV~YpIl~L~~~-~~~v~~yv~~lE~~~I~~l~~----~gi---~a~-~~~~~~GVWv~~~KIasIG 120 (184)
T TIGR00214 50 ERGGQVTYHGPGQQVMYVILDLKRF-QLDVRWLVTQLEQTVIITLAE----LGI---EGE-PIADATGVWVEGKKVASLG 120 (184)
T ss_pred CCCCeeEEECCCeEEEEEEEEchhc-CCCHHHHHHHHHHHHHHHHHH----cCC---ceE-EcCCCCeEEecCCEEEEEE
Confidence 5788888899999777677765421 223333332 2355555554 343 221 1133 3688899999887
Q ss_pred eeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 021912 224 CTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (305)
Q Consensus 224 iE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~ 283 (305)
+-..- . .-.=|+.|||+++. ..||+.+. +..++.+++...+.++|.+.|
T Consensus 121 v~v~r--~--vt~HG~ALNv~~dL~~F~~I~PCGl~~~~vTSl~~~-------~~~~~~~~v~~~~~~~f~~~f 183 (184)
T TIGR00214 121 IRVRR--G--CTFHGLALNINMDLSPFSHINPCGYAGREMGSLNQF-------LPGATVENVAPLLIKAFAELL 183 (184)
T ss_pred EEEec--c--EeecceEEEcCCCchHhccEEcCCCCCCcEeeHHHH-------cCCCCHHHHHHHHHHHHHHHh
Confidence 66431 1 12358889998751 13555432 356788999999999998765
No 16
>TIGR00545 lipoyltrans lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus.
Probab=93.80 E-value=0.21 Score=48.30 Aligned_cols=64 Identities=22% Similarity=0.321 Sum_probs=42.1
Q ss_pred CCCeeecCCCCceeEEEeecCCCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEe
Q 021912 150 SKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGI 222 (305)
Q Consensus 150 ~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGI 222 (305)
+|..=.-.+|++.||++.+.+. ...... -...-.|+++|+++ | +++.+.=+|||.++||||+|.
T Consensus 73 GGGaVyhD~g~l~~s~i~~~~~-~~~~~~-~~~~~~i~~aL~~l----G---i~a~~~~rnDl~v~gkKisGs 136 (324)
T TIGR00545 73 GGGAVFHDLGNICFSFITPKDG-KEFENA-KIFTRNVIKALNSL----G---VEAELSGRNDLVVDGRKISGS 136 (324)
T ss_pred CCceEEEcCCceEEEEEEcCCc-cchhhH-HHHHHHHHHHHHHh----C---CCeEECCCceEEECCEEEEEE
Confidence 3444455668999999986431 111111 22344567777664 4 566777799999999999997
No 17
>PRK14344 lipoate-protein ligase B; Provisional
Probab=92.96 E-value=2.7 Score=38.82 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=70.9
Q ss_pred ccCCCCeeecCCCCceeEEEeecCCCCCchhHHHHH--HHHHHHHHHHhhhcCCCCCCccee-eecCcEEECCEEEEEee
Q 021912 147 RGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKI-KWPNDLYLNGIKVGGIL 223 (305)
Q Consensus 147 RGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~G~~~~~v~I-KWPNDIyv~gkKigGIL 223 (305)
-.|+|....--||.|..-.++..... ....-.|+. --++.+++++ +|. +... +=---||++++|||-|=
T Consensus 87 ~~RGG~iTyHGPGQLV~YpIl~L~~~-~~~v~~yv~~lE~~ii~~l~~----~gi---~~~~~~~~~GVWv~~~KIaaIG 158 (223)
T PRK14344 87 IDRGGEVTHHMPGQLVTYLVLDLRRF-NKDLNWYLRQLEQVLIDVLAD----LGI---DGERLDGLTGVWIGNKKVASIG 158 (223)
T ss_pred cCCCceeeEECCCcEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHH----cCC---ceeecCCCCcEEcCCCeEEEEe
Confidence 36888888899999777677765421 111222322 2334444443 453 2221 11134678889999887
Q ss_pred eeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 021912 224 CTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (305)
Q Consensus 224 iE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~ 283 (305)
+-..- ..-.=|+-|||+++. ..||+.+. +..++.+++...+.++|.+.|
T Consensus 159 v~v~r----~vT~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~~-------~~~~~~~~v~~~l~~~f~~~f 221 (223)
T PRK14344 159 IGCRR----WITQHGFSLNVDCDLEGFNKIVPCGLEGCQVGRLSDW-------IPGLNIKEVKPLLKKSLQERF 221 (223)
T ss_pred EeEec----ceeecceEEecCCCccccCcEEcCCCCCCcEeeHHHH-------cCCCCHHHHHHHHHHHHHHHh
Confidence 66431 112368889998741 13555432 347889999999999998876
No 18
>PRK14345 lipoate-protein ligase B; Provisional
Probab=92.45 E-value=3.3 Score=38.54 Aligned_cols=118 Identities=18% Similarity=0.146 Sum_probs=72.4
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHHH--HHHHHHHHHHhhhcCCCCCCcce-ee-ecCcEEEC------CE
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIK-IK-WPNDLYLN------GI 217 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~G~~~~~v~-IK-WPNDIyv~------gk 217 (305)
.|+|-....-||.|..-.++.... ....-.|+- --++.+++++ +|. +.. .+ -| -||++ ++
T Consensus 76 dRGG~iTyHGPGQLV~YpIldL~~--~~~v~~yv~~LE~~vI~~l~~----~gi---~a~~~~~~~-GVWv~~~~~~~~~ 145 (234)
T PRK14345 76 DRGGKITWHGPGQLVGYPIIKLAE--PLDVVDYVRRLEEALIAVCAD----LGL---NAGRVDGRS-GVWVPADGGRPDR 145 (234)
T ss_pred cCCCceeEeCCCeEEEEEEEecCC--CCCHHHHHHHHHHHHHHHHHH----cCC---ceeecCCCC-eEEECCCCCCCcc
Confidence 688888888999876666766543 122223332 2344555554 443 221 11 22 36665 69
Q ss_pred EEEEeeeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 021912 218 KVGGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (305)
Q Consensus 218 KigGILiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~ 283 (305)
|||-|=+-..- ..-.=|+.|||+++. ..||+.+. .+..++.+++...+.++|.+.|
T Consensus 146 KIaaIGv~v~r----~vT~HG~ALNV~~DL~~F~~IvPCGl~~~~vTSl~~~------~g~~~~~~~v~~~l~~~f~~~f 215 (234)
T PRK14345 146 KIAAIGIRVSR----GVTMHGFALNCDNDLAAFDAIVPCGISDAGVTTLSAE------LGRTVTVAEVVDPVAAALCDAL 215 (234)
T ss_pred eEEEEEeeecc----ceeecceEEEeCCChHHhceEEeCCCCCCcEEehhHh------hCCCCCHHHHHHHHHHHHHHHh
Confidence 99988765331 112368999998741 24566432 2457889999999999999887
Q ss_pred HH
Q 021912 284 DT 285 (305)
Q Consensus 284 ~~ 285 (305)
..
T Consensus 216 ~~ 217 (234)
T PRK14345 216 DG 217 (234)
T ss_pred Cc
Confidence 54
No 19
>PRK14343 lipoate-protein ligase B; Provisional
Probab=91.60 E-value=4.4 Score=37.76 Aligned_cols=120 Identities=14% Similarity=0.124 Sum_probs=72.8
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHH--HHHHHHHHHHHhhhcCCCCCCcceee-ecCcEEEC-----CEEE
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYV--ASLALTEAINYVCSRDGLPCLDIKIK-WPNDLYLN-----GIKV 219 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~--~~lAV~~aL~~~~~~~G~~~~~v~IK-WPNDIyv~-----gkKi 219 (305)
.|+|.....-||.|..-.++..... ....-.|+ .--++.++++++ |. +..-+ =.--||++ ++||
T Consensus 80 dRGG~iTyHGPGQLV~YpIl~L~~~-~~~v~~yv~~lE~~vI~~l~~~----gi---~~~~~~~~~GVwv~~~~~~~~KI 151 (235)
T PRK14343 80 DRGGQITYHGPGQVVAYLLLDLRRR-KLMVRELVTRIEQAVIDTLAAY----NL---ASERKAGAPGIYVASGPHQGAKI 151 (235)
T ss_pred CCCCceeEeCCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHHc----CC---ceeecCCCCeEEEeCCCCCCCeE
Confidence 7889998899998766667665421 12222232 233555666543 43 22222 11246776 8999
Q ss_pred EEeeeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 021912 220 GGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDT 285 (305)
Q Consensus 220 gGILiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~~ 285 (305)
|-|=+-..- . .-.=|+-|||+++. ..|++.+ .+..++.+++...+.++|.+.|..
T Consensus 152 aaIGv~v~r--~--vT~HG~ALNv~~DL~~F~~I~PCGl~~~~vTSL~~-------lg~~~~~~~v~~~l~~~f~~~f~~ 220 (235)
T PRK14343 152 AALGLKIRN--G--CSYHGLSLNVKMDLRPFLAINPCGYAGLETVDMAS-------LGVAADWADVAQTLARRLIANLDG 220 (235)
T ss_pred EEEeeeeec--c--eeecccEEEeCCCchhhCcEECCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHHHhCc
Confidence 988665331 1 11358889998741 2355532 246789999999999999988754
Q ss_pred H
Q 021912 286 F 286 (305)
Q Consensus 286 ~ 286 (305)
.
T Consensus 221 ~ 221 (235)
T PRK14343 221 A 221 (235)
T ss_pred c
Confidence 3
No 20
>COG0095 LplA Lipoate-protein ligase A [Coenzyme metabolism]
Probab=91.18 E-value=0.69 Score=42.97 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=74.1
Q ss_pred cceEEEeCcccccccCCCCeeecCCCCceeEEEeecCCCC-CchhHHHHHHHHHHHHHHHhhhcCCCCCCc-ceeeecCc
Q 021912 134 VGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDGR-VVPLLQYVASLALTEAINYVCSRDGLPCLD-IKIKWPND 211 (305)
Q Consensus 134 ~gtvviA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~~-~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~-v~IKWPND 211 (305)
+| +-+..+.|.|.. =.-..|++.||++.+-+... ....+.-.+.-.+.++++.+ | ++ ....=.||
T Consensus 64 ~~-i~vvRR~sGGGa-----V~hd~g~l~~S~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l----g---v~~~~~~~~nD 130 (248)
T COG0095 64 DG-IPVVRRPSGGGA-----VFHDLGNLNYSVITPDEGGLESYETLYKFLLQPVIDALRAL----G---VEGAECPGRND 130 (248)
T ss_pred cC-CcEEEEcCCCce-----EEecCCcEEEEEEECCCCccccHHHHHHHHHHHHHHHHHHc----C---CCeeccCCCcc
Confidence 44 567788887653 44556699999998654321 11122223455666676654 3 34 66777899
Q ss_pred EEECCEEEEEeeeeeeecCCce--EEEEeeccCCCC-----CCc--------cchHHHHHHhhhcCCCCCCHHHHHHHHH
Q 021912 212 LYLNGIKVGGILCTSTYRTKKF--NVSIGIGLNVNN-----EEP--------TTCLNAVLRKLSDSTYQFRREDVIAAFF 276 (305)
Q Consensus 212 Iyv~gkKigGILiE~~~~~~~~--~vvIGIGINvn~-----~~p--------~~sl~~~~~~~~~~~~~i~r~eLla~il 276 (305)
|.++|+||+|+=--. ..+.. +..+=.-+++.. ..| ..+..+....+.+. ..++.++++..++
T Consensus 131 l~v~gkKisG~Aq~~--~~~~~l~hgtll~~~d~~~l~~~l~~~~~k~~~k~~~s~~~rv~~l~~~-~~~~~~e~~~~l~ 207 (248)
T COG0095 131 LVVDGKKISGSAQRR--TKGRILHHGTLLLDIDLELLARVLRVPKEKIKSKGIKSVRERVANLEEL-LKISVEEFLEALL 207 (248)
T ss_pred eeEcCcEEeeHHHHh--hCCcEEEEEEEEEeCCHHHHHHHhCCChhhhhhcccccHHHhCcchhhc-cCCCHHHHHHHHH
Confidence 999999999962111 11111 111111112110 011 11222211111111 4588999999999
Q ss_pred HHHHHHHH
Q 021912 277 NKFETFYD 284 (305)
Q Consensus 277 ~~fe~~~~ 284 (305)
+.|.+.+.
T Consensus 208 ~~f~~~~~ 215 (248)
T COG0095 208 EAFFKVLG 215 (248)
T ss_pred HHHHHhhC
Confidence 99998874
No 21
>PRK14349 lipoate-protein ligase B; Provisional
Probab=90.59 E-value=7.5 Score=35.91 Aligned_cols=120 Identities=14% Similarity=0.099 Sum_probs=71.6
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHHHH--HHHHHHHHHhhhcCCCCCCccee-eecCcEEEC-----CEEE
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS--LALTEAINYVCSRDGLPCLDIKI-KWPNDLYLN-----GIKV 219 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~--lAV~~aL~~~~~~~G~~~~~v~I-KWPNDIyv~-----gkKi 219 (305)
.|+|....--||.|..-.++..... ....-.|+-. -++.++++++ |.+. ..+. +-| -||++ ++||
T Consensus 65 ~RGG~iTyHGPGQLV~YpIldL~~~-~~~vr~yv~~LE~~~I~~l~~~----gi~~-a~~~~~~~-GVWv~~~~~~~~KI 137 (220)
T PRK14349 65 DRGGQVTYHGPGQVLAYTLFDLRRA-GLYVREYVDMLEQATLATLREL----GLEQ-ACRKPGAP-GIYVPQPGGELAKI 137 (220)
T ss_pred cCCcceEEeCCCcEEEEEEEEcccC-CCCHHHHHHHHHHHHHHHHHHh----CCcc-eeecCCCC-cEEeCCCCCCCceE
Confidence 6888888889998766667665421 1222233322 3455565553 4310 0111 222 36665 4899
Q ss_pred EEeeeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 021912 220 GGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDT 285 (305)
Q Consensus 220 gGILiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~~ 285 (305)
|-|=+-..- ..-.=|+.|||+++. ..||+.+ .+..++.+++...+.++|.+.|..
T Consensus 138 aaiGv~v~r----~vT~HG~ALNv~~DL~~F~~IvPCGl~~~~vTSl~~-------~g~~~~~~~v~~~l~~~f~~~f~~ 206 (220)
T PRK14349 138 AALGVKVRN----GYAYHGLALNIDMDLSPFLGINPCGYEGLRTVDLAA-------CGVRTSVERAGELLAAQLARAHGQ 206 (220)
T ss_pred EEEeeEEec----ceeecceeEEecCCchhhCcEEcCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHHHhCc
Confidence 988766431 112368889998741 2355533 245789999999999999988743
No 22
>PRK14341 lipoate-protein ligase B; Provisional
Probab=89.78 E-value=9 Score=35.16 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=65.6
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHH--HHHHHHHHHHHhhhcCCCCCCcceeeecC--cEEECC-------
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYV--ASLALTEAINYVCSRDGLPCLDIKIKWPN--DLYLNG------- 216 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~--~~lAV~~aL~~~~~~~G~~~~~v~IKWPN--DIyv~g------- 216 (305)
.|+|-.=.--||.|..-.++..... ....-.|+ .--++.+++++ +|. +.. .-|+ -||+++
T Consensus 70 ~RGG~iTyHGPGQlV~YpIl~L~~~-~~~v~~yv~~lE~~iI~~l~~----~gi---~~~-~~~~~~GVWv~~~~~~~~~ 140 (213)
T PRK14341 70 GRGGQYTYHGPGQRVAYVMLDLKRR-RRDVRAFVAALEEWIIATLAA----FNI---RGE-RREDRVGVWVRRPDKGSGA 140 (213)
T ss_pred CCCcceeEECCCeEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHHH----hCC---ceE-EcCCCCeEEecCccCCCCC
Confidence 3555554556777655556654321 12222222 22334444443 453 222 2244 578873
Q ss_pred -EEEEEeeeeeeecCCceEEEEeeccCCCCC--------------CccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 021912 217 -IKVGGILCTSTYRTKKFNVSIGIGLNVNNE--------------EPTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFET 281 (305)
Q Consensus 217 -kKigGILiE~~~~~~~~~vvIGIGINvn~~--------------~p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~ 281 (305)
+|||-|=+-..- ..-.=|+.|||+++ ...||+.+ .+..++.+++...++++|++
T Consensus 141 ~~KIaaIGv~v~r----~vT~HG~ALNv~~dL~~F~~IvPCGl~~~~vTSl~~-------~g~~~~~~~v~~~l~~~f~~ 209 (213)
T PRK14341 141 EDKIAAIGVRLRR----WVSFHGISINVEPDLSHFSGIVPCGISEHGVTSLVD-------LGLPVTMDDVDAALKKAFEK 209 (213)
T ss_pred CCcEEEEeeeEec----ceeccceEEEecCChhhhCcEecCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHH
Confidence 799988766331 11235888999874 12466643 14578899999999999988
Q ss_pred HH
Q 021912 282 FY 283 (305)
Q Consensus 282 ~~ 283 (305)
.|
T Consensus 210 ~f 211 (213)
T PRK14341 210 VF 211 (213)
T ss_pred Hh
Confidence 65
No 23
>COG0321 LipB Lipoate-protein ligase B [Coenzyme metabolism]
Probab=86.67 E-value=17 Score=33.62 Aligned_cols=120 Identities=17% Similarity=0.217 Sum_probs=66.5
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCCCchhHHHHH--HHHHHHHHHHhhhcCCCCCCcceeeecCcEEECC-EEEEEeee
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNG-IKVGGILC 224 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~--~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~g-kKigGILi 224 (305)
+|+|..=..-||.+-.-.++..... +...-.|+. =-||.++|.++ |... ..+=|=| -||+++ +|||-|=+
T Consensus 76 ~RGGqvTyHGPGQ~V~Y~ildLkr~-~~~vr~~V~~LEqavI~tLa~~----~i~~-~~~~~~~-GVwV~~~~KIAaiGi 148 (221)
T COG0321 76 DRGGQVTYHGPGQLVAYPILDLKRP-KLDVREYVRALEQAVINTLAEY----GIEA-ERRPDRP-GVWVEEERKIAAIGI 148 (221)
T ss_pred cCCceeEEeCCCcEEEEEEEecccc-cccHHHHHHHHHHHHHHHHHHc----CCcc-cccCCCC-eEEecCCceEEEEEE
Confidence 4556554555666444455544321 111223333 23566666554 4310 0111112 277775 99998766
Q ss_pred eeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 021912 225 TSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDT 285 (305)
Q Consensus 225 E~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~~ 285 (305)
-..- + .-.=|+.|||+++. +.+++.+. +..++-+++-..+.++|.+.+..
T Consensus 149 rirr--~--vs~HGlALNv~~DL~~F~~I~PCG~~~~~~tsl~d~-------~~~v~~~~V~~~l~~~~~~~l~~ 212 (221)
T COG0321 149 RIRR--G--VTFHGLALNVNMDLSPFNRIVPCGYAGMEVTSLSDL-------GPPVTVDEVAKALVAAFAKLLGP 212 (221)
T ss_pred EEec--c--cceeeeEEeccCCchhccceeccccCCCceeEHHHh-------CCCCcHHHHHHHHHHHHHHHhCC
Confidence 6431 1 12358899998751 23455432 34588899999999999988754
No 24
>PRK03822 lplA lipoate-protein ligase A; Provisional
Probab=85.81 E-value=2.3 Score=41.58 Aligned_cols=126 Identities=17% Similarity=0.212 Sum_probs=67.7
Q ss_pred EeCcccccccCCCCeeecCCCCceeEEEeecCCCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEEC---
Q 021912 139 VADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLN--- 215 (305)
Q Consensus 139 iA~~QTaGRGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~--- 215 (305)
++.+.|.| +.=.-..|++.||++.+.+. ... . ...-.|+++|+++ | +++.+.=.|||.++
T Consensus 68 vvRR~SGG-----GAVyhD~Gnl~~s~i~~~~~---~~~-~-~~~~~ii~aL~~l----G---i~a~~~~rnDi~v~~~~ 130 (338)
T PRK03822 68 LARRSSGG-----GAVFHDLGNTCFTFMAGKPE---YDK-T-ISTSIVLNALNSL----G---VSAEASGRNDLVVKTAE 130 (338)
T ss_pred EEEECCCC-----ceEEEcCCCcEEEEEeCCCc---cCH-H-HHHHHHHHHHHHc----C---CceeECCCccEEEecCC
Confidence 44555544 34444558999999875321 111 1 1234677888765 4 57888889999995
Q ss_pred -CEEEEEeeeeeee-cCCce--EEEEeeccCCCC-----CCcc--------chHHHHHHhhhcCCCCCCHHHHHHHHHHH
Q 021912 216 -GIKVGGILCTSTY-RTKKF--NVSIGIGLNVNN-----EEPT--------TCLNAVLRKLSDSTYQFRREDVIAAFFNK 278 (305)
Q Consensus 216 -gkKigGILiE~~~-~~~~~--~vvIGIGINvn~-----~~p~--------~sl~~~~~~~~~~~~~i~r~eLla~il~~ 278 (305)
|+||+|- +.. ..+.. +-.+=+-.|+.. ..|. .+...-+..+.+-.+.++.+++...+++.
T Consensus 131 g~kKisGs---Aq~~~~~~~l~HGTlL~~~d~~~l~~~L~~~~~k~~skgv~Sv~srVtnl~~~~~~~~~e~~~~~l~~~ 207 (338)
T PRK03822 131 GDRKVSGS---AYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLQAKGITSVRSRVTNLTELLPGITHEQVCEAITEA 207 (338)
T ss_pred CCcEEEEE---eeeeeCCeEEEEEEEEecCCHHHHHHHhCCChhhhhhccccchHhhhccHHHhCCCCCHHHHHHHHHHH
Confidence 6999993 222 12211 111111222211 0111 11111111111112358899999999999
Q ss_pred HHHHHH
Q 021912 279 FETFYD 284 (305)
Q Consensus 279 fe~~~~ 284 (305)
|.+.|.
T Consensus 208 f~~~~~ 213 (338)
T PRK03822 208 FFAHYG 213 (338)
T ss_pred HHHHhC
Confidence 988763
No 25
>PRK14346 lipoate-protein ligase B; Provisional
Probab=81.40 E-value=38 Score=31.53 Aligned_cols=59 Identities=14% Similarity=0.096 Sum_probs=39.4
Q ss_pred ECCEEEEEeeeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 021912 214 LNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKF 279 (305)
Q Consensus 214 v~gkKigGILiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~f 279 (305)
.+++|||-|=+-..- ..-.=|+.|||+++. ..|++.+ .+..++.+++...+.++|
T Consensus 156 ~~~~KIaAiGv~v~r----~vT~HG~ALNv~~DL~~F~~IvPCGl~~~~vTSL~~-------lg~~~~~~~v~~~l~~~f 224 (230)
T PRK14346 156 RGLGKIAALGIKVSR----HCTYHGVALNVAMDLEPFSRINPCGYAGLQTVDLST-------IGVQTTWDEAASVLGQQL 224 (230)
T ss_pred cccceEEEEeeEEec----ceeecceeEEcCCChhhhCcEECCCCCCCceeeHHH-------hCCCCCHHHHHHHHHHHH
Confidence 345799987666431 112369999998741 2355532 256789999999999999
Q ss_pred HHHH
Q 021912 280 ETFY 283 (305)
Q Consensus 280 e~~~ 283 (305)
.+.+
T Consensus 225 ~~~~ 228 (230)
T PRK14346 225 ARYL 228 (230)
T ss_pred HHHh
Confidence 8765
No 26
>PRK14061 unknown domain/lipoate-protein ligase A fusion protein; Provisional
Probab=78.90 E-value=5.3 Score=41.72 Aligned_cols=63 Identities=22% Similarity=0.267 Sum_probs=42.1
Q ss_pred ccCCCCeeecCCCCceeEEEeecCCCCCchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEE----CCEEEEE
Q 021912 147 RGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYL----NGIKVGG 221 (305)
Q Consensus 147 RGR~gr~W~Sp~G~L~fS~~l~~~~~~~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv----~gkKigG 221 (305)
|=-+|..=....|++.||++.+.+. ...- ...-.|++||+++ | +++.+.=-|||.+ +|+||+|
T Consensus 295 R~SGGGAVYHD~GNlnfSfi~~~~~---~~~~--~~~~~Ii~aL~~L----G---I~ae~sgRNDI~v~~~~~GkKISG 361 (562)
T PRK14061 295 RSSGGGAVFHDLGNTCFTFMAGKPE---YDKT--ISTSIVLNALNAL----G---VSAEASGRNDLVVKTAEGDRKVSG 361 (562)
T ss_pred ECCCCcEEEEcCCceEEEEEeCCcc---cchH--HHHHHHHHHHHHc----C---CCeEECCCccEEEeeCCCCcEEEE
Confidence 4444555556678899999874221 1111 1234567788764 4 5788888899999 6999999
No 27
>PRK14347 lipoate-protein ligase B; Provisional
Probab=78.70 E-value=54 Score=30.09 Aligned_cols=118 Identities=15% Similarity=0.199 Sum_probs=64.3
Q ss_pred cCCCCeeecCCCCceeEEEeecCCCC-CchhHHHHH--HHHHHHHHHHhhhcCCCCCCccee-eecCcEEEC-----CEE
Q 021912 148 GRSKNAWESPKGCLMFSFTIQMEDGR-VVPLLQYVA--SLALTEAINYVCSRDGLPCLDIKI-KWPNDLYLN-----GIK 218 (305)
Q Consensus 148 GR~gr~W~Sp~G~L~fS~~l~~~~~~-~l~~ls~~~--~lAV~~aL~~~~~~~G~~~~~v~I-KWPNDIyv~-----gkK 218 (305)
.|+|..=..-||.|..-.++...... ....-.|+- --++.++++++ |. +..- +=--=||++ ++|
T Consensus 68 ~RGG~vTyHGPGQlV~YpIldL~~~~~~~~v~~yv~~lE~~ii~~l~~~----gi---~~~~~~~~~GVWv~~~~~~~~K 140 (209)
T PRK14347 68 GRGGKFTFHGPGQRVIYPILNLASPNRHKDLKLYIKMLEEWIINSLNYF----GI---KAYIIKDKVGIWVKVRKDEFAK 140 (209)
T ss_pred cCCcceEEeCCCcEEEEEEEeccccccCCCHHHHHHHHHHHHHHHHHHc----CC---ceEEcCCCCEEEEcCCCCCCce
Confidence 45665555667876555566553211 112222332 23445555543 43 2211 101113443 689
Q ss_pred EEEeeeeeeecCCceEEEEeeccCCCCCC--------------ccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 021912 219 VGGILCTSTYRTKKFNVSIGIGLNVNNEE--------------PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFY 283 (305)
Q Consensus 219 igGILiE~~~~~~~~~vvIGIGINvn~~~--------------p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~ 283 (305)
||-|=+-..- ..-.=|+.+||+++. ..||+.+ .+..++.+++...+.++|.+.|
T Consensus 141 IaaiGv~v~r----~vT~HG~AlNv~~dL~~F~~IvPCGl~~~~vTSl~~-------~g~~~~~~~v~~~l~~~f~~~f 208 (209)
T PRK14347 141 IAAIGVRVRK----WVTYHGVAINISTDLSKFSGIIPCGLENSLVTSLNQ-------LGIHVEMSEFDKIIQTEFNKIF 208 (209)
T ss_pred EEEEeEEEec----ceeecceEEEeCCCccccCcEECCCCCCCcEeeHHH-------hCCCCCHHHHHHHHHHHHHHHh
Confidence 9988766431 112368889998641 2456643 1457889999999999998764
No 28
>PF04017 DUF366: Domain of unknown function (DUF366); InterPro: IPR007162 This is an archaeal family of unknown function.; PDB: 2DDZ_E.
Probab=58.85 E-value=27 Score=31.40 Aligned_cols=74 Identities=24% Similarity=0.379 Sum_probs=37.4
Q ss_pred ceeEEEee-cCCCC--CchhHHHHHHHHHHHHHHHhhhcCCCCCCcceeeecCcEEECCEEEEEeeeeeeecCCceEEEE
Q 021912 161 LMFSFTIQ-MEDGR--VVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSI 237 (305)
Q Consensus 161 L~fS~~l~-~~~~~--~l~~ls~~~~lAV~~aL~~~~~~~G~~~~~v~IKWPNDIyv~gkKigGILiE~~~~~~~~~vvI 237 (305)
-|.-|++. ++... .....|-+...-+.+.|++. | +. ..+=-.|||++|+|+.=-...... ...-|
T Consensus 63 dmlhFIvEhFD~~dl~~~~~rQRLlv~i~kE~L~~~----g---v~-~~R~GDDLy~~~~KLSVSIAt~s~----vS~kI 130 (183)
T PF04017_consen 63 DMLHFIVEHFDSPDLKLAYLRQRLLVAIIKEVLEEY----G---VK-LRREGDDLYVNGRKLSVSIATASP----VSTKI 130 (183)
T ss_dssp EEEEEEEEE-S---HHHHHHHHHHHHHHHHHHHHTT----T------EEEETTEEEETTEE-EEEEEEEET----TEEEE
T ss_pred cceEEEEeeCCCCcHHHHHHHHHHHHHHHHHHHHhc----C---Cc-eeecccceeECCCEEEEEEEecCc----chheE
Confidence 45666664 33211 12233544444455555543 4 23 234589999999999633333221 22347
Q ss_pred eeccCCCCC
Q 021912 238 GIGLNVNNE 246 (305)
Q Consensus 238 GIGINvn~~ 246 (305)
=+||||...
T Consensus 131 H~GiNV~~~ 139 (183)
T PF04017_consen 131 HFGINVSSE 139 (183)
T ss_dssp EEEEESS-T
T ss_pred EEeEeeccc
Confidence 778999864
No 29
>COG2029 Uncharacterized conserved protein [Function unknown]
Probab=49.98 E-value=62 Score=28.92 Aligned_cols=69 Identities=22% Similarity=0.306 Sum_probs=36.4
Q ss_pred cCcEEECCEEEEEeeeeeeecCCceEEEEeeccCCCCC-CccchHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 021912 209 PNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNVNNE-EPTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTF 286 (305)
Q Consensus 209 PNDIyv~gkKigGILiE~~~~~~~~~vvIGIGINvn~~-~p~~sl~~~~~~~~~~~~~i~r~eLla~il~~fe~~~~~~ 286 (305)
-.|+|++|+|+.=-..-.. ....-|=+||||... .|. ++++ . +.. ....|..++..++..++.+-++..
T Consensus 109 GDDly~~grKLtVsIat~s----~vs~kiHlGiNV~t~g~p~--V~~i-g-L~d-lg~~Di~~~m~~va~~yv~Eie~i 178 (189)
T COG2029 109 GDDLYVEGRKLTVSIATVS----PVSSKIHLGINVKTEGVPD--VDAI-G-LED-LGYGDILEFMERVAVAYVREIEKI 178 (189)
T ss_pred CCceeecCcEEEEEEEecC----CcceeEEEeEeeecccCCC--CCcc-c-ccc-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5799999999853332222 222346778999864 231 1111 0 001 112566666666665555544443
No 30
>PF05603 DUF775: Protein of unknown function (DUF775); InterPro: IPR008493 This family consists of several eukaryotic proteins of unknown function.
Probab=26.08 E-value=2.5e+02 Score=25.40 Aligned_cols=24 Identities=4% Similarity=0.135 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhc
Q 021912 266 FRREDVIAAFFNKFETFYDTFINQ 289 (305)
Q Consensus 266 i~r~eLla~il~~fe~~~~~~~~~ 289 (305)
.+..++..++++.+-+++.-|...
T Consensus 147 ~~~~~~A~ki~~NlfNyl~SF~~~ 170 (202)
T PF05603_consen 147 DSTKEFAQKIAENLFNYLSSFSGS 170 (202)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCC
Confidence 478999999999999999999765
Done!