Query 021917
Match_columns 305
No_of_seqs 283 out of 1486
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 11:15:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s6b_A Methionine aminopeptida 100.0 2.4E-51 8.2E-56 393.2 23.7 227 72-303 38-267 (368)
2 2b3h_A Methionine aminopeptida 100.0 3.7E-49 1.3E-53 373.8 22.0 215 88-302 18-235 (329)
3 4fuk_A Methionine aminopeptida 100.0 2E-48 6.8E-53 369.8 22.2 212 92-303 2-224 (337)
4 3pka_A Methionine aminopeptida 100.0 4.3E-42 1.5E-46 319.1 23.1 198 99-302 4-201 (285)
5 3tb5_A Methionine aminopeptida 100.0 2.1E-37 7.3E-42 283.7 21.1 165 139-303 1-165 (264)
6 3mx6_A Methionine aminopeptida 100.0 1.7E-36 5.7E-41 277.9 20.2 165 138-302 4-168 (262)
7 1o0x_A Methionine aminopeptida 100.0 6.5E-36 2.2E-40 274.0 19.9 165 138-302 12-177 (262)
8 2gg2_A Methionine aminopeptida 100.0 9.8E-36 3.3E-40 272.6 20.2 164 139-302 1-166 (263)
9 3tav_A Methionine aminopeptida 100.0 2.4E-35 8.2E-40 273.7 21.2 166 137-302 27-201 (286)
10 1qxy_A Methionyl aminopeptidas 100.0 2.6E-35 9E-40 267.7 15.4 161 142-302 3-164 (252)
11 2q8k_A Proliferation-associate 100.0 5.2E-33 1.8E-37 269.5 18.2 166 137-303 14-192 (401)
12 3q6d_A Proline dipeptidase; st 100.0 1.8E-32 6E-37 260.8 19.2 161 135-300 123-283 (356)
13 2zsg_A Aminopeptidase P, putat 100.0 1.9E-32 6.5E-37 260.3 19.3 160 136-300 127-286 (359)
14 1wy2_A XAA-Pro dipeptidase; st 100.0 3.1E-32 1.1E-36 259.3 20.2 160 136-300 121-280 (351)
15 1wn1_A Dipeptidase; prolidase, 100.0 9.4E-32 3.2E-36 256.5 18.5 158 136-299 125-282 (356)
16 4ege_A Dipeptidase PEPE; struc 100.0 9.4E-32 3.2E-36 258.7 18.4 160 135-300 143-303 (378)
17 1kp0_A Creatine amidinohydrola 100.0 7.4E-32 2.5E-36 260.1 15.9 166 136-301 151-317 (402)
18 3fm3_A Methionine aminopeptida 100.0 1.3E-31 4.6E-36 256.1 15.6 158 137-300 34-195 (358)
19 4fkc_A XAA-Pro aminopeptidase; 100.0 6.5E-31 2.2E-35 251.8 18.3 160 136-299 144-303 (377)
20 3ig4_A XAA-Pro aminopeptidase; 100.0 5.8E-31 2E-35 257.0 18.2 155 136-295 165-320 (427)
21 2v3z_A XAA-Pro aminopeptidase; 100.0 3.4E-30 1.2E-34 252.3 20.2 154 136-294 169-323 (440)
22 1xgs_A Methionine aminopeptida 100.0 1.1E-30 3.7E-35 243.7 15.0 147 146-303 1-150 (295)
23 1chm_A Creatine amidinohydrola 100.0 2.7E-30 9.4E-35 249.8 17.8 165 136-301 151-317 (401)
24 2iw2_A XAA-Pro dipeptidase; me 100.0 1.8E-29 6.3E-34 250.5 18.8 154 136-294 181-340 (494)
25 3rva_A Organophosphorus acid a 100.0 2.2E-29 7.5E-34 247.4 18.5 157 136-298 153-316 (451)
26 2nw5_A Methionine aminopeptida 100.0 1.8E-29 6.3E-34 241.3 15.2 150 143-298 42-195 (360)
27 3biq_A FACT complex subunit SP 100.0 7E-29 2.4E-33 244.1 14.8 162 135-298 170-357 (467)
28 3l24_A XAA-Pro dipeptidase; PI 100.0 1.4E-28 4.9E-33 244.8 16.8 156 136-298 153-313 (517)
29 3cb6_A FACT complex subunit SP 100.0 1.2E-28 4.1E-33 240.7 15.0 162 136-299 171-352 (444)
30 1b6a_A Methionine aminopeptida 100.0 9.4E-29 3.2E-33 243.5 13.5 150 140-298 158-314 (478)
31 4b28_A Metallopeptidase, famil 100.0 7.9E-29 2.7E-33 244.6 10.3 153 136-294 223-383 (470)
32 3ctz_A XAA-Pro aminopeptidase 99.9 8.6E-26 2.9E-30 229.9 13.7 160 136-299 315-483 (623)
33 4b6a_t Probable metalloproteas 99.8 4.8E-18 1.6E-22 169.6 18.9 163 140-304 38-264 (614)
34 2dj8_A Protein CBFA2T1; zinc f 97.8 8.3E-06 2.8E-10 57.7 3.1 41 11-58 14-54 (60)
35 2od1_A Protein CBFA2T1; zinc f 97.7 1.2E-05 4.2E-10 56.9 2.0 42 10-58 11-52 (60)
36 2d8q_A BLU protein, zinc finge 97.7 2.7E-05 9.3E-10 56.9 3.8 41 12-59 15-55 (70)
37 2jw6_A Deformed epidermal auto 97.6 1.6E-05 5.4E-10 54.4 1.4 41 11-58 8-48 (52)
38 2odd_A Protein CBFA2T1; MYND z 97.5 3.2E-05 1.1E-09 55.3 1.9 42 11-59 16-57 (64)
39 3q6d_A Proline dipeptidase; st 96.6 0.013 4.3E-07 54.8 10.9 96 150-252 239-340 (356)
40 4ege_A Dipeptidase PEPE; struc 96.6 0.011 3.8E-07 56.0 10.4 95 150-251 259-359 (378)
41 1wn1_A Dipeptidase; prolidase, 96.4 0.016 5.5E-07 54.3 10.1 95 150-251 239-339 (356)
42 1o0x_A Methionine aminopeptida 96.3 0.015 5.2E-07 52.1 9.2 99 150-251 131-251 (262)
43 3pka_A Methionine aminopeptida 96.3 0.014 4.9E-07 53.1 9.1 99 150-251 155-275 (285)
44 1wy2_A XAA-Pro dipeptidase; st 96.3 0.023 8E-07 53.1 10.6 99 150-251 236-336 (351)
45 2zsg_A Aminopeptidase P, putat 96.3 0.021 7.1E-07 53.2 10.2 95 150-251 242-342 (359)
46 2gg2_A Methionine aminopeptida 96.2 0.024 8.1E-07 50.7 9.9 99 150-251 120-240 (263)
47 3tb5_A Methionine aminopeptida 96.0 0.027 9.1E-07 50.4 9.4 98 151-251 119-238 (264)
48 3mx6_A Methionine aminopeptida 96.0 0.03 1E-06 50.2 9.6 85 150-237 122-210 (262)
49 3cb6_A FACT complex subunit SP 96.0 0.041 1.4E-06 52.8 11.2 98 150-252 307-421 (444)
50 3qwp_A SET and MYND domain-con 96.0 0.003 1E-07 60.9 3.0 42 12-60 47-90 (429)
51 4fkc_A XAA-Pro aminopeptidase; 95.9 0.042 1.4E-06 51.6 10.6 95 150-251 260-360 (377)
52 1qxy_A Methionyl aminopeptidas 95.9 0.026 9.1E-07 50.0 8.8 99 150-251 118-239 (252)
53 2v3z_A XAA-Pro aminopeptidase; 95.9 0.067 2.3E-06 51.6 12.3 101 150-251 285-412 (440)
54 3qww_A SET and MYND domain-con 95.9 0.0027 9.2E-08 61.5 2.3 42 12-60 49-92 (433)
55 3tav_A Methionine aminopeptida 95.9 0.025 8.5E-07 51.5 8.4 99 150-251 149-275 (286)
56 3biq_A FACT complex subunit SP 95.8 0.056 1.9E-06 52.3 11.1 97 149-251 313-425 (467)
57 3n71_A Histone lysine methyltr 95.6 0.0049 1.7E-07 60.6 2.9 42 12-60 49-92 (490)
58 1kp0_A Creatine amidinohydrola 95.4 0.069 2.4E-06 50.5 9.9 99 150-251 272-381 (402)
59 2b3h_A Methionine aminopeptida 95.4 0.042 1.4E-06 51.3 8.1 100 150-252 189-310 (329)
60 3s6b_A Methionine aminopeptida 95.3 0.046 1.6E-06 51.9 8.3 99 150-251 220-340 (368)
61 1xgs_A Methionine aminopeptida 95.1 0.12 4.2E-06 47.2 10.4 84 150-236 103-191 (295)
62 3ig4_A XAA-Pro aminopeptidase; 95.1 0.13 4.4E-06 49.6 10.9 101 150-251 281-390 (427)
63 2yqq_A Zinc finger HIT domain- 94.9 0.013 4.5E-07 40.6 2.4 39 3-49 1-41 (56)
64 1chm_A Creatine amidinohydrola 94.6 0.17 5.9E-06 47.9 10.3 99 150-251 272-381 (401)
65 1x4s_A Protein FON, zinc finge 94.2 0.017 5.9E-07 40.4 1.6 39 3-49 1-44 (59)
66 3rva_A Organophosphorus acid a 93.7 0.56 1.9E-05 45.4 11.9 37 151-187 271-307 (451)
67 2q8k_A Proliferation-associate 93.4 0.34 1.2E-05 46.3 9.7 83 150-237 145-239 (401)
68 2nw5_A Methionine aminopeptida 93.1 0.14 5E-06 48.2 6.4 94 150-247 153-261 (360)
69 4b28_A Metallopeptidase, famil 92.3 0.16 5.3E-06 49.7 5.7 96 150-251 345-450 (470)
70 1b6a_A Methionine aminopeptida 92.2 0.23 8E-06 48.6 6.8 95 149-243 271-376 (478)
71 4fuk_A Methionine aminopeptida 92.1 0.58 2E-05 43.4 9.2 94 151-251 178-297 (337)
72 2iw2_A XAA-Pro dipeptidase; me 91.8 0.78 2.7E-05 44.8 10.1 38 150-187 302-339 (494)
73 3l24_A XAA-Pro dipeptidase; PI 91.8 0.88 3E-05 44.9 10.4 37 151-187 268-304 (517)
74 3ctz_A XAA-Pro aminopeptidase 91.6 0.32 1.1E-05 49.1 7.2 97 150-250 439-542 (623)
75 3fm3_A Methionine aminopeptida 90.4 0.42 1.4E-05 44.9 6.3 42 256-297 47-88 (358)
76 1lv3_A Hypothetical protein YA 76.5 1.1 3.7E-05 32.1 1.7 13 38-50 27-39 (68)
77 2e5r_A Dystrobrevin alpha; ZZ 57.5 1.9 6.4E-05 30.2 -0.4 47 4-58 1-55 (63)
78 2l8e_A Polyhomeotic-like prote 53.3 9.3 0.00032 25.4 2.6 29 13-49 19-47 (49)
79 4b6a_t Probable metalloproteas 51.3 58 0.002 32.6 9.1 33 162-194 228-260 (614)
80 1jjd_A Metallothionein, SMTA; 51.0 4.3 0.00015 27.8 0.6 20 31-50 20-39 (55)
81 2lo3_A SAGA-associated factor 48.9 5.3 0.00018 25.8 0.8 15 11-25 16-30 (44)
82 1wfh_A Zinc finger (AN1-like) 45.8 10 0.00034 26.7 1.9 11 13-23 16-26 (64)
83 2dj7_A Actin-binding LIM prote 45.2 11 0.00036 27.0 2.0 21 3-23 1-26 (80)
84 2cu8_A Cysteine-rich protein 2 44.2 15 0.0005 25.7 2.7 20 4-23 1-20 (76)
85 2w0t_A Lethal(3)malignant brai 43.5 6 0.0002 25.7 0.4 11 40-50 27-37 (43)
86 3gty_X Trigger factor, TF; cha 43.3 18 0.00063 34.5 4.0 43 174-240 130-172 (433)
87 3mhs_E SAGA-associated factor 43.1 8.8 0.0003 29.1 1.3 21 4-25 68-88 (96)
88 2d8v_A Zinc finger FYVE domain 42.5 12 0.0004 26.6 1.8 29 14-50 10-38 (67)
89 2y78_A Peptidyl-prolyl CIS-tra 41.8 32 0.0011 27.0 4.6 51 220-279 40-97 (133)
90 1hxv_A Trigger factor; FKBP fo 40.7 21 0.00071 27.4 3.2 51 220-279 27-81 (113)
91 2vn1_A 70 kDa peptidylprolyl i 39.0 17 0.00059 28.2 2.6 52 220-280 31-90 (129)
92 4dip_A Peptidyl-prolyl CIS-tra 37.6 31 0.0011 26.4 3.9 53 219-280 25-87 (125)
93 2pbc_A FK506-binding protein 2 37.0 20 0.00067 26.5 2.5 51 221-280 4-61 (102)
94 3h0g_L DNA-directed RNA polyme 35.9 15 0.0005 25.8 1.4 21 11-31 20-46 (63)
95 1w26_A Trigger factor, TF; cha 35.0 41 0.0014 32.0 5.0 45 172-240 131-175 (432)
96 2ki0_A DS119; beta-alpha-beta, 34.0 20 0.0007 21.4 1.6 23 245-267 5-27 (36)
97 2iyb_E Testin, TESS, TES; LIM 31.2 24 0.00082 23.8 2.0 12 38-49 52-63 (65)
98 3pr9_A FKBP-type peptidyl-prol 30.1 76 0.0026 25.8 5.2 49 223-280 2-69 (157)
99 2eod_A TNF receptor-associated 28.5 16 0.00056 24.1 0.7 22 38-59 35-61 (66)
100 2ppn_A FK506-binding protein 1 28.3 1.1E+02 0.0036 22.4 5.5 49 223-280 16-71 (107)
101 1yat_A FK506 binding protein; 27.1 76 0.0026 23.6 4.4 49 223-280 22-77 (113)
102 1z60_A TFIIH basal transcripti 26.5 17 0.00057 25.1 0.4 20 12-31 15-38 (59)
103 1t11_A Trigger factor, TF; hel 26.4 32 0.0011 32.3 2.6 55 173-251 135-193 (392)
104 1zfo_A LAsp-1; LIM domain, zin 26.1 25 0.00085 20.6 1.1 14 10-23 1-14 (31)
105 1wg2_A Zinc finger (AN1-like) 25.4 34 0.0012 24.0 1.9 17 13-30 16-35 (64)
106 2lgo_A FKBP; infectious diseas 25.1 94 0.0032 24.0 4.8 48 223-279 40-94 (130)
107 3noj_A 4-carboxy-4-hydroxy-2-o 24.9 63 0.0022 28.3 4.0 68 222-301 163-231 (238)
108 3vhs_A ATPase wrnip1; zinc fin 24.1 16 0.00055 20.9 -0.0 9 24-32 7-15 (29)
109 2yql_A PHD finger protein 21A; 23.1 38 0.0013 22.4 1.8 27 4-30 1-28 (56)
110 3hvz_A Uncharacterized protein 23.1 84 0.0029 22.5 3.7 46 169-231 20-65 (78)
111 3kz7_A FK506-binding protein 3 22.8 1E+02 0.0034 23.1 4.4 50 222-280 19-82 (119)
112 2kr7_A FKBP-type peptidyl-prol 22.8 95 0.0033 24.8 4.5 51 220-279 4-61 (151)
113 1ncs_A Peptide M30F, transcrip 22.7 34 0.0012 20.9 1.4 13 48-60 33-45 (47)
114 2fc7_A ZZZ3 protein; structure 22.7 7.2 0.00025 28.7 -2.2 42 13-59 22-69 (82)
115 1zfd_A SWI5; DNA binding motif 22.6 33 0.0011 18.5 1.2 11 49-59 19-29 (32)
116 2cs3_A Protein C14ORF4, MY039 22.2 46 0.0016 24.5 2.1 26 2-27 3-34 (93)
117 2yqp_A Probable ATP-dependent 22.0 53 0.0018 22.5 2.2 35 8-50 15-49 (60)
118 1va1_A Transcription factor SP 22.0 41 0.0014 19.1 1.6 13 48-60 23-35 (37)
119 1ard_A Yeast transcription fac 20.9 37 0.0013 17.5 1.1 12 48-59 15-26 (29)
120 2elp_A Zinc finger protein 406 20.9 27 0.00091 19.7 0.5 12 49-60 24-35 (37)
121 3cgm_A SLYD, peptidyl-prolyl C 20.9 1.1E+02 0.0036 24.9 4.4 48 223-279 3-51 (158)
122 3o5q_A Peptidyl-prolyl CIS-tra 20.8 1.7E+02 0.0059 22.3 5.5 50 222-280 34-90 (128)
123 2elr_A Zinc finger protein 406 20.6 37 0.0013 18.7 1.2 12 48-59 22-33 (36)
124 2h2m_A Protein MURR1, COMM dom 20.5 15 0.0005 28.5 -0.9 18 41-58 87-106 (108)
125 2kl0_A Putative thiamin biosyn 20.4 75 0.0026 22.3 2.9 32 204-236 30-62 (73)
126 2aus_D NOP10, ribosome biogene 20.4 31 0.0011 23.8 0.8 22 13-34 6-28 (60)
No 1
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=2.4e-51 Score=393.19 Aligned_cols=227 Identities=45% Similarity=0.808 Sum_probs=213.7
Q ss_pred CCcccccchhhcccCCCCCCCCCCCCcCCCCccccCCCCcccCCcCCCccccccCCCCCCCCCccccccccCCHHHHHHH
Q 021917 72 SSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERM 151 (305)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~s~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~vKs~~EIe~m 151 (305)
.++....|.| +.++++||+|.|+|+||||++||++.||++|++|+|+.+|.|..++.......+.|||++||+.|
T Consensus 38 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~i~~p~y~~~~~~~~~~~~~~~~~~~IKs~~EIe~m 112 (368)
T 3s6b_A 38 DPTNRKYWVY-----DDHLKNFVNFKFTGDVRPWPLSKINHVPSHIERPDYAISSIPESELIYKRKSDIYVNNEEEIQRI 112 (368)
T ss_dssp CTTCCGGGGG-----STTGGGGTTCCCSSSCCCCCCCCCCCCCTTSCCCTTTTTSCCHHHHSCCCTTCCCCCCHHHHHHH
T ss_pred CCCCCccccc-----ccccCCCCCCCcCCcccccccCCCCCCCcCCCCCccccCCCChhhhhccccCCceeCCHHHHHHH
Confidence 4566778876 45789999999999999999999999999999999999998877654444457899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEE
Q 021917 152 RETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI 231 (305)
Q Consensus 152 R~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~i 231 (305)
|+|+++++++|+.+.+.++||+||.||++.++.++.++|++|++++|.+||+++|+|+|++++|++|++++|++||+|+|
T Consensus 113 R~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~r~L~~GDiV~i 192 (368)
T 3s6b_A 113 REACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNEIVCHGIPDYRPLKSGDIINI 192 (368)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTEEECCCCCSCBCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCccccccCCCCCccccCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeceeCcEEeceeeEEEec---CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeeec
Q 021917 232 DVTVYYKGVHGDLNETYFVG---NADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQ 303 (305)
Q Consensus 232 Dv~~~~~GY~~D~~RT~~vG---~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~~ 303 (305)
|++++++||++|++|||+|| ++++++++++++++++++++++++|||++++||+++++++++++||+++++.
T Consensus 193 D~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~ 267 (368)
T 3s6b_A 193 DISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSY 267 (368)
T ss_dssp EEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSC
T ss_pred EEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccce
Confidence 99999999999999999999 8999999999999999999999999999999999999999999999987543
No 2
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=3.7e-49 Score=373.78 Aligned_cols=215 Identities=55% Similarity=0.953 Sum_probs=197.0
Q ss_pred CCCCCCCCCCcCCCCcc-ccCCCCcccCCcCCCcccccc--CCCCCCCCCccccccccCCHHHHHHHHHHHHHHHHHHHH
Q 021917 88 ARTPKLPHFDWTGTLRP-YPISSKLTVPAYIELPDWALD--GTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDA 164 (305)
Q Consensus 88 ~~~~~~~~~~~~g~~~p-~~~s~~~~vp~~i~~p~ya~~--g~~~~e~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~ 164 (305)
...++||+|.|+|+||| +++++++.||++|++|+|+.. |.+..|.......+|.|||++||+.||+|+++++++++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~~~iKs~~EI~~mR~A~~ia~~al~~ 97 (329)
T 2b3h_A 18 GSHMLEDPYRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDV 97 (329)
T ss_dssp --------CCCSSSCCCCCCCCCCCCCCTTSCCCGGGGSTTCCCHHHHHTTTCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCcccCCccCCCCccCCccCCCcccCChhhcccccCCCchhhhcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999 999999999999999999987 777554433333578999999999999999999999999
Q ss_pred HHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcEEece
Q 021917 165 AARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDL 244 (305)
Q Consensus 165 ~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~ 244 (305)
+.+.++||+||.||++.++.++.++|++|++++|.+||+++|+|+|++++|++|++++|++||+|+||++++++||++|+
T Consensus 98 ~~~~i~pGvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~~~~H~~p~~~~L~~GDiv~iD~G~~~~GY~sD~ 177 (329)
T 2b3h_A 98 AAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDL 177 (329)
T ss_dssp HHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEE
T ss_pred HHHHhhCCCcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCCCcCCCCCCCcCCCCCCEEEEEeeEEECCEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeee
Q 021917 245 NETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIK 302 (305)
Q Consensus 245 ~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~ 302 (305)
+|||+||++++++++++++++++++++++++|||++++||+++++++++++||++++.
T Consensus 178 tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~~~ 235 (329)
T 2b3h_A 178 NETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRS 235 (329)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEECCS
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCC
Confidence 9999999999999999999999999999999999999999999999999999997654
No 3
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=2e-48 Score=369.81 Aligned_cols=212 Identities=48% Similarity=0.796 Sum_probs=195.1
Q ss_pred CCCCCCcCCCCccccCCCCcccCCcCCCccccccC--CCCCC---------CCCccccccccCCHHHHHHHHHHHHHHHH
Q 021917 92 KLPHFDWTGTLRPYPISSKLTVPAYIELPDWALDG--TPKVE---------PNSDLQHVVEIKTPDQIERMRETCRIARE 160 (305)
Q Consensus 92 ~~~~~~~~g~~~p~~~s~~~~vp~~i~~p~ya~~g--~~~~e---------~~~~~~~~r~vKs~~EIe~mR~A~~ia~~ 160 (305)
.|++|.|||+||||++||++.||++|++|+|+..+ .+..+ ........|.|||++||+.||+|++|+++
T Consensus 2 ~~~~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~ 81 (337)
T 4fuk_A 2 AMKTFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSRE 81 (337)
T ss_dssp CEECCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHH
T ss_pred CccCcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999743 32221 11122246899999999999999999999
Q ss_pred HHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcE
Q 021917 161 VLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240 (305)
Q Consensus 161 ~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY 240 (305)
+|+.+++.++||+||.||++.++++++++|+++++++|.+||+++|+|.|++++|++|++++|++||+|+||+++.++||
T Consensus 82 a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY 161 (337)
T 4fuk_A 82 VLDIATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGF 161 (337)
T ss_dssp HHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTE
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeeec
Q 021917 241 HGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIKQ 303 (305)
Q Consensus 241 ~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~~ 303 (305)
++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++||++++..
T Consensus 162 ~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~~~~~ 224 (337)
T 4fuk_A 162 HGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSVVRTY 224 (337)
T ss_dssp EEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEECSSE
T ss_pred EEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCcccCc
Confidence 999999999999999999999999999999999999999999999999999999999988754
No 4
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=4.3e-42 Score=319.08 Aligned_cols=198 Identities=46% Similarity=0.727 Sum_probs=188.4
Q ss_pred CCCCccccCCCCcccCCcCCCccccccCCCCCCCCCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH
Q 021917 99 TGTLRPYPISSKLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEI 178 (305)
Q Consensus 99 ~g~~~p~~~s~~~~vp~~i~~p~ya~~g~~~~e~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI 178 (305)
.+++|||.+||.+.||++|++|.|+.++.+.. ..+|+|||++||+.||+|++++++++..+.+.++||+||.||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el 77 (285)
T 3pka_A 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQE------GSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDEL 77 (285)
T ss_dssp CCCCCCCCCCCCCCCCTTSCCCTTTTSSSCSC------SCSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHH
T ss_pred CCCCcccccCCCCCCcccCCCCcccccCCCCc------ccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH
Confidence 46899999999999999999999998776431 148999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHH
Q 021917 179 DRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASR 258 (305)
Q Consensus 179 ~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~ 258 (305)
++.++.++.++|++++.++|.+||.++|+|.|+.++|++|++++|++||+|+||+++.++||++|++|||++|+++++++
T Consensus 78 ~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~ 157 (285)
T 3pka_A 78 DRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHR 157 (285)
T ss_dssp HHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHH
T ss_pred HHHHHHHHHHcCCccccccccCCCCceEecccceeecCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHH
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeee
Q 021917 259 QLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIK 302 (305)
Q Consensus 259 ~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~ 302 (305)
+++++++++++++++++|||++++||+++++++++++||+.+.+
T Consensus 158 ~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~~~ 201 (285)
T 3pka_A 158 LLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRD 201 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEECCS
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccCCC
Confidence 99999999999999999999999999999999999999987643
No 5
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=2.1e-37 Score=283.74 Aligned_cols=165 Identities=28% Similarity=0.517 Sum_probs=160.7
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCC
Q 021917 139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP 218 (305)
Q Consensus 139 ~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p 218 (305)
||.|||++||+.||+|++|++++++.+.+.++||+||.||++.++.++.++|+.++..+|.+||.++++|.|..++|+.|
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~~~H~~~ 80 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFP 80 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETTEEECCCC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcccccCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCc
Q 021917 219 DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS 298 (305)
Q Consensus 219 ~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~ 298 (305)
++++|++||+|+||+++.++||++|++|||++|++++++++++++++++++++++++|||++++||++++++++++.||.
T Consensus 81 ~~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~ 160 (264)
T 3tb5_A 81 RKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYG 160 (264)
T ss_dssp CSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCE
T ss_pred CCccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeec
Q 021917 299 VEIKQ 303 (305)
Q Consensus 299 vv~~~ 303 (305)
+++..
T Consensus 161 ~~~~~ 165 (264)
T 3tb5_A 161 VVRDF 165 (264)
T ss_dssp ECCSC
T ss_pred eeeec
Confidence 77643
No 6
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=1.7e-36 Score=277.86 Aligned_cols=165 Identities=39% Similarity=0.721 Sum_probs=159.1
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCC
Q 021917 138 HVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGI 217 (305)
Q Consensus 138 ~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~ 217 (305)
.++.|||++||+.||+|+++++++++.+.+.++||+||.||++.++.++.++|++++.++|.+||.++|+|.|+.++|+.
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~H~~ 83 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGI 83 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCC
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEecccccccCCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCC
Q 021917 218 PDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF 297 (305)
Q Consensus 218 p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~ 297 (305)
|++++|++||+|+||+++.++||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++||
T Consensus 84 p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~ 163 (262)
T 3mx6_A 84 PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNY 163 (262)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTC
T ss_pred CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeee
Q 021917 298 SVEIK 302 (305)
Q Consensus 298 ~vv~~ 302 (305)
+.+++
T Consensus 164 ~~~~~ 168 (262)
T 3mx6_A 164 SVVRD 168 (262)
T ss_dssp EECCS
T ss_pred ccCCC
Confidence 87644
No 7
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=6.5e-36 Score=274.04 Aligned_cols=165 Identities=36% Similarity=0.614 Sum_probs=159.2
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCC
Q 021917 138 HVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGI 217 (305)
Q Consensus 138 ~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~ 217 (305)
.+|+|||++||+.||+|++++.++++.+.+.++||+||.||++.++.++.++|+.++.++|.+||.++|+|.|+.++|++
T Consensus 12 ~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~~g~n~~~~H~~ 91 (262)
T 1o0x_A 12 HMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGL 91 (262)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCC
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCccccccccCCCcceEecccccccCCC
Confidence 58999999999999999999999999999999999999999999999999999998877788999999999999999999
Q ss_pred CCCCC-CCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcC
Q 021917 218 PDSRK-LEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSG 296 (305)
Q Consensus 218 p~~r~-L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G 296 (305)
|++++ |++||+|+||+++.++||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|
T Consensus 92 p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G 171 (262)
T 1o0x_A 92 PLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVG 171 (262)
T ss_dssp CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTT
T ss_pred CCCCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cceeee
Q 021917 297 FSVEIK 302 (305)
Q Consensus 297 ~~vv~~ 302 (305)
|+.++.
T Consensus 172 ~~~~~~ 177 (262)
T 1o0x_A 172 FNVIRD 177 (262)
T ss_dssp CEECCS
T ss_pred CcccCC
Confidence 986543
No 8
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=9.8e-36 Score=272.56 Aligned_cols=164 Identities=45% Similarity=0.766 Sum_probs=158.5
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-HHHcCCCCCCCCCCCCCceeeecCCCccccCC
Q 021917 139 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEA-TITAGGYPSPLNYHFFPKSCCTSVNEVICHGI 217 (305)
Q Consensus 139 ~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~-~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~ 217 (305)
+|+|||++||+.||+|++++.++++.+.+.++||+||.||++.++.+ +.++|++++.++|.+||.++|+|.|+.++|++
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~~~~H~~ 80 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGI 80 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccccccCCC
Confidence 57899999999999999999999999999999999999999999999 88999999888888999999999999999999
Q ss_pred CCC-CCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcC
Q 021917 218 PDS-RKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSG 296 (305)
Q Consensus 218 p~~-r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G 296 (305)
|++ ++|++||+|+||+++.++||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|
T Consensus 81 p~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G 160 (263)
T 2gg2_A 81 PDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEG 160 (263)
T ss_dssp CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTT
T ss_pred CCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 998 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cceeee
Q 021917 297 FSVEIK 302 (305)
Q Consensus 297 ~~vv~~ 302 (305)
|+.+++
T Consensus 161 ~~~~~~ 166 (263)
T 2gg2_A 161 FSVVRE 166 (263)
T ss_dssp CEECSS
T ss_pred CEECCC
Confidence 986543
No 9
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=2.4e-35 Score=273.74 Aligned_cols=166 Identities=33% Similarity=0.498 Sum_probs=159.6
Q ss_pred cccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccc
Q 021917 137 QHVV--EIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (305)
Q Consensus 137 ~~~r--~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~ 214 (305)
+.+| .|||++||+.||+|++++++++..+.+.++||+||.||++.+..++.++|++++.++|.+||.++|+|.|+.++
T Consensus 27 ~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~~~~ 106 (286)
T 3tav_A 27 GRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPSFLGYHGFPASICSSVNDQVV 106 (286)
T ss_dssp CSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETTBCS
T ss_pred HHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcccccccCCCCCceEEecCcccc
Confidence 4577 99999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred cCCCC-CCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH-
Q 021917 215 HGIPD-SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA- 292 (305)
Q Consensus 215 Hg~p~-~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~- 292 (305)
|+.|+ +++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++
T Consensus 107 H~~p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~ 186 (286)
T 3tav_A 107 HGIPSATAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTR 186 (286)
T ss_dssp CCCCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 99999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---Hhc--CCceeee
Q 021917 293 ---TMS--GFSVEIK 302 (305)
Q Consensus 293 ---~~~--G~~vv~~ 302 (305)
+++ ||+.+++
T Consensus 187 ~~~~~~~~g~~~~~~ 201 (286)
T 3tav_A 187 AAEKQFDRAFGIVDG 201 (286)
T ss_dssp HHHHHHTCCCEECTT
T ss_pred HHHHHhcCCCcccCC
Confidence 999 9987543
No 10
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=2.6e-35 Score=267.75 Aligned_cols=161 Identities=30% Similarity=0.570 Sum_probs=154.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCC
Q 021917 142 IKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSR 221 (305)
Q Consensus 142 vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r 221 (305)
|||++||+.||+|++++.++++.+.+.++||+||.||++.++.++.++|++++.++|.+||.++|+|.|+.++|++|+++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~~ 82 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKR 82 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETTEEECCCCCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCccccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999886555557999999999999999999999
Q ss_pred CCCCCCEEEEEeeceeCcEEeceeeEEEecCCCH-HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCcee
Q 021917 222 KLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADE-ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVE 300 (305)
Q Consensus 222 ~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~-e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv 300 (305)
+|++||+|+||+++.++||++|++|||++|++++ ++++++++++++++++++++|||++++||+++++++++++||+.+
T Consensus 83 ~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~ 162 (252)
T 1qxy_A 83 VIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVI 162 (252)
T ss_dssp BCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEEC
T ss_pred CcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred ee
Q 021917 301 IK 302 (305)
Q Consensus 301 ~~ 302 (305)
++
T Consensus 163 ~~ 164 (252)
T 1qxy_A 163 KN 164 (252)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 11
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=5.2e-33 Score=269.53 Aligned_cols=166 Identities=21% Similarity=0.259 Sum_probs=151.6
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCC----CCCCCCceeeecCCCc
Q 021917 137 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPL----NYHFFPKSCCTSVNEV 212 (305)
Q Consensus 137 ~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~pspl----ny~~fp~~v~ts~n~~ 212 (305)
..+|.|||++||+.||+|++|++++|+.+.+.++||+||.||++.++.++.++|+ +... .|.+||..+|+|+|++
T Consensus 14 ~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga-~~~~~~~~~~~g~~f~~~vS~N~~ 92 (401)
T 2q8k_A 14 QQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETG-KIFKKEKEMKKGIAFPTSISVNNC 92 (401)
T ss_dssp CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHH-TSSTTCTTCCEEEEEEEEEEETTE
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC-hhhcccccccCCCCCCcEEeCCcc
Confidence 3589999999999999999999999999999999999999999999999999876 2222 2455666688899999
Q ss_pred cccCCC--CC--CCCCCCCEEEEEeeceeCcEEeceeeEEEec-----CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Q 021917 213 ICHGIP--DS--RKLEDGDIVNIDVTVYYKGVHGDLNETYFVG-----NADEASRQLVQCTYECLEKAISIVKPGVRFRE 283 (305)
Q Consensus 213 ~~Hg~p--~~--r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG-----~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~e 283 (305)
++||+| ++ ++|++||+|+||+++.++||++|++|||+|| ++++++++++++++++++++|+++|||++++|
T Consensus 93 v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~~d 172 (401)
T 2q8k_A 93 VCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQ 172 (401)
T ss_dssp EECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBHHH
T ss_pred cccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHH
Confidence 999998 53 8999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCceeeec
Q 021917 284 IGEVINRHATMSGFSVEIKQ 303 (305)
Q Consensus 284 I~~ai~~~~~~~G~~vv~~~ 303 (305)
|+.+++++++++||++++.+
T Consensus 173 I~~ai~~~~~~~G~~~v~~~ 192 (401)
T 2q8k_A 173 VTEAWNKVAHSFNCTPIEGM 192 (401)
T ss_dssp HHHHHHHHHHTTTCEECTTC
T ss_pred HHHHHHHHHHHcCCeecCCc
Confidence 99999999999999988653
No 12
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.8e-32 Score=260.82 Aligned_cols=161 Identities=24% Similarity=0.391 Sum_probs=154.2
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccc
Q 021917 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (305)
Q Consensus 135 ~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~ 214 (305)
....+|+|||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.++|+.+. .||+++++|.|..++
T Consensus 123 ~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~g~~~~-----~f~~iv~~g~n~~~~ 197 (356)
T 3q6d_A 123 LVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSS-----SFDIIVASGLRSALP 197 (356)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHTTCSEE-----SSCCEEEEGGGGGCT
T ss_pred hhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCCcC-----CCCCEEEEcCccccC
Confidence 345789999999999999999999999999999999999999999999999999998753 599999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021917 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (305)
Q Consensus 215 Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~ 294 (305)
|+.|++++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++
T Consensus 198 H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~ 277 (356)
T 3q6d_A 198 HGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITE 277 (356)
T ss_dssp TCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcee
Q 021917 295 SGFSVE 300 (305)
Q Consensus 295 ~G~~vv 300 (305)
+||+..
T Consensus 278 ~g~~~~ 283 (356)
T 3q6d_A 278 KGYGEY 283 (356)
T ss_dssp TTCGGG
T ss_pred cCCccc
Confidence 999754
No 13
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=1.9e-32 Score=260.32 Aligned_cols=160 Identities=19% Similarity=0.349 Sum_probs=153.5
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.++|+.+ .+||.++++|.|..++|
T Consensus 127 i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~g~~~-----~~f~~iv~~g~~~~~~h 201 (359)
T 2zsg_A 127 VKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEG-----VAFDTIVASGCRSALPH 201 (359)
T ss_dssp HHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEEEGGGGGSTT
T ss_pred hhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEEEcccccccc
Confidence 4568999999999999999999999999999999999999999999999999999874 25999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhc
Q 021917 216 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 295 (305)
Q Consensus 216 g~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~ 295 (305)
+.|++++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++
T Consensus 202 ~~~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~ 281 (359)
T 2zsg_A 202 GKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREK 281 (359)
T ss_dssp CCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT
T ss_pred CCCCCcccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcee
Q 021917 296 GFSVE 300 (305)
Q Consensus 296 G~~vv 300 (305)
||+..
T Consensus 282 g~~~~ 286 (359)
T 2zsg_A 282 GYGEF 286 (359)
T ss_dssp TCGGG
T ss_pred CCccc
Confidence 99743
No 14
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=3.1e-32 Score=259.34 Aligned_cols=160 Identities=23% Similarity=0.401 Sum_probs=153.7
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|++++.+++..+.+.++||+||.||++.++..+.++|+.+ .+||+++++|.|..++|
T Consensus 121 i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~-----~~f~~iv~~g~n~~~~H 195 (351)
T 1wy2_A 121 IRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEK-----PAFDTIIASGYRSALPH 195 (351)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEEEGGGGGSTT
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCCEEEEcccccccc
Confidence 4568999999999999999999999999999999999999999999999999999874 25999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhc
Q 021917 216 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 295 (305)
Q Consensus 216 g~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~ 295 (305)
+.|++++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++
T Consensus 196 ~~~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~ 275 (351)
T 1wy2_A 196 GVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEY 275 (351)
T ss_dssp CBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT
T ss_pred CCCCCcccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcee
Q 021917 296 GFSVE 300 (305)
Q Consensus 296 G~~vv 300 (305)
||+..
T Consensus 276 g~~~~ 280 (351)
T 1wy2_A 276 GYGEY 280 (351)
T ss_dssp TCGGG
T ss_pred CCccc
Confidence 99754
No 15
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=99.98 E-value=9.4e-32 Score=256.50 Aligned_cols=158 Identities=20% Similarity=0.298 Sum_probs=151.2
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|++++..++..+.+.++||+||.||++.++.++.++ +.+ .+||.++++|.|..++|
T Consensus 125 i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-~~~-----~~f~~iv~~g~n~~~~H 198 (356)
T 1wn1_A 125 IKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIREL-SDG-----IAFEPIVASGENAANPH 198 (356)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHH-SSE-----ESSCCEEEEGGGGGCTT
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh-CcC-----CCCCcEEEEeccccccc
Confidence 446899999999999999999999999999999999999999999999999988 553 25999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhc
Q 021917 216 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 295 (305)
Q Consensus 216 g~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~ 295 (305)
+.|++++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++
T Consensus 199 ~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~ 278 (356)
T 1wn1_A 199 HEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKA 278 (356)
T ss_dssp CCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTT
T ss_pred CCCCCCeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCce
Q 021917 296 GFSV 299 (305)
Q Consensus 296 G~~v 299 (305)
||+.
T Consensus 279 g~~~ 282 (356)
T 1wn1_A 279 GYGE 282 (356)
T ss_dssp TCGG
T ss_pred CCcc
Confidence 9974
No 16
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.98 E-value=9.4e-32 Score=258.67 Aligned_cols=160 Identities=20% Similarity=0.271 Sum_probs=152.3
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccc
Q 021917 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 214 (305)
Q Consensus 135 ~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~ 214 (305)
....+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++.++.++|+.+. .| .++++|.|..++
T Consensus 143 ~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~-----~f-~iv~sG~n~~~~ 216 (378)
T 4ege_A 143 VLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAADIAEAIVAEGHSAV-----AF-VIVGSGPHGADP 216 (378)
T ss_dssp HHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEE-----EE-EEEEEGGGGGCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-----Ce-eEEEeeCCCCcc
Confidence 445789999999999999999999999999999999999999999999999999998752 47 689999999999
Q ss_pred cCCCCCCCCCCCCEEEEEeecee-CcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 021917 215 HGIPDSRKLEDGDIVNIDVTVYY-KGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (305)
Q Consensus 215 Hg~p~~r~L~~GDiV~iDv~~~~-~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~ 293 (305)
|+.|++++|++||+|+||+++.+ +||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++
T Consensus 217 H~~~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~ 296 (378)
T 4ege_A 217 HHGYSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLA 296 (378)
T ss_dssp TCCCCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcee
Q 021917 294 MSGFSVE 300 (305)
Q Consensus 294 ~~G~~vv 300 (305)
++||+..
T Consensus 297 ~~G~~~~ 303 (378)
T 4ege_A 297 DAGLAEY 303 (378)
T ss_dssp HTTCGGG
T ss_pred HcCCCCc
Confidence 9999753
No 17
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.97 E-value=7.4e-32 Score=260.09 Aligned_cols=166 Identities=19% Similarity=0.211 Sum_probs=153.1
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCC-CCCCCCceeeecCCCccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPL-NYHFFPKSCCTSVNEVIC 214 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~pspl-ny~~fp~~v~ts~n~~~~ 214 (305)
...+|.|||++||+.||+|++++++++..+.+.++||+||.||++.++.++.++|+.+.+. .|+.++.++++|.|..++
T Consensus 151 i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv~~g~n~~~~ 230 (402)
T 1kp0_A 151 VMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQSGINTDGA 230 (402)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEEEGGGGGST
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhcccccCcccccCccceeecccccccc
Confidence 4468999999999999999999999999999999999999999999999999887643221 234456689999999999
Q ss_pred cCCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021917 215 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (305)
Q Consensus 215 Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~ 294 (305)
|++|++++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++
T Consensus 231 H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~ 310 (402)
T 1kp0_A 231 HNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZ 310 (402)
T ss_dssp TCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred cCCCCCcccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceee
Q 021917 295 SGFSVEI 301 (305)
Q Consensus 295 ~G~~vv~ 301 (305)
+||..+.
T Consensus 311 ~G~~~~~ 317 (402)
T 1kp0_A 311 WDLLRYR 317 (402)
T ss_dssp TTCGGGB
T ss_pred cCCCeec
Confidence 9998654
No 18
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.97 E-value=1.3e-31 Score=256.12 Aligned_cols=158 Identities=22% Similarity=0.215 Sum_probs=147.3
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccC
Q 021917 137 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG 216 (305)
Q Consensus 137 ~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg 216 (305)
..++.+++++||+.||+|++|++++++.+.+.++||+||.||++.+++++.+.|+.|+..+| +|| +|+|+|++++||
T Consensus 34 ~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~-~FP--~ciSvN~~v~Hg 110 (358)
T 3fm3_A 34 MEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGI-GFP--AGMSMNSCAAHY 110 (358)
T ss_dssp CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGE-EEE--EEEEETTEEECC
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCC-CCC--cEEeeCCEEEec
Confidence 46889999999999999999999999999999999999999999999999999999876654 899 789999999999
Q ss_pred CC----CCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021917 217 IP----DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 292 (305)
Q Consensus 217 ~p----~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~ 292 (305)
+| ++++|++||+|+||+|+.++||++|.+|||.||+. ..++++++++++++++++++||++..+|+.+|++++
T Consensus 111 ~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~---~~~l~~~~~~al~aai~~~~pG~~~~dig~ai~~v~ 187 (358)
T 3fm3_A 111 TVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKEN---LEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVI 187 (358)
T ss_dssp CCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGG---GHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred CCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEecccccc---chhHHHHHHHHHHHHHHhhhcCCccccccHHHHHHH
Confidence 99 47899999999999999999999999999999854 456788999999999999999999999999999999
Q ss_pred HhcCCcee
Q 021917 293 TMSGFSVE 300 (305)
Q Consensus 293 ~~~G~~vv 300 (305)
+++|++++
T Consensus 188 ~~~~~~v~ 195 (358)
T 3fm3_A 188 SSYEVEIG 195 (358)
T ss_dssp TTCEEECS
T ss_pred hhccceec
Confidence 99998764
No 19
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.97 E-value=6.5e-31 Score=251.80 Aligned_cols=160 Identities=21% Similarity=0.259 Sum_probs=150.5
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|++++..++..+++.++||+||.||++.+...+.+++... +..||.++++|.|..++|
T Consensus 144 i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~g~~----~~~f~~iv~~G~n~~~~H 219 (377)
T 4fkc_A 144 ISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFGAD----DVSFEPIVASGPNGANPH 219 (377)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTSTTCC----EESSCCEEEEGGGGGCTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhccCCC----CcccCccccccccccccc
Confidence 4568999999999999999999999999999999999999999999998888764322 235999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhc
Q 021917 216 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 295 (305)
Q Consensus 216 g~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~ 295 (305)
+.|++++|++||+|+||+++.|+||++|++|||++|+++++++++++++.++++++++++|||+++++|++++++++++.
T Consensus 220 ~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~ 299 (377)
T 4fkc_A 220 HRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKY 299 (377)
T ss_dssp CCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCce
Q 021917 296 GFSV 299 (305)
Q Consensus 296 G~~v 299 (305)
||+.
T Consensus 300 g~~~ 303 (377)
T 4fkc_A 300 GYGE 303 (377)
T ss_dssp TCTT
T ss_pred cccc
Confidence 9963
No 20
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=99.97 E-value=5.8e-31 Score=257.04 Aligned_cols=155 Identities=17% Similarity=0.295 Sum_probs=148.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|++++.+++..+++.++||+||.||++.++..+.++|+.. .+||.+|++|.|..++|
T Consensus 165 i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~-----~~f~~ivasG~n~~~~H 239 (427)
T 3ig4_A 165 ICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKH-----HAFNTILASGKNATVLH 239 (427)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGGSTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCCEEEECccccccc
Confidence 4468999999999999999999999999999999999999999999999999999853 25999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEe-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021917 216 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (305)
Q Consensus 216 g~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~ 294 (305)
++|++++|++||+|+||+++.++||++|++|||+| |+++++++++|+++.++++++++++|||++++||++++++++.+
T Consensus 240 ~~~~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~ 319 (427)
T 3ig4_A 240 YEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAE 319 (427)
T ss_dssp CCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHH
T ss_pred cCcccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999987
Q ss_pred c
Q 021917 295 S 295 (305)
Q Consensus 295 ~ 295 (305)
.
T Consensus 320 ~ 320 (427)
T 3ig4_A 320 G 320 (427)
T ss_dssp H
T ss_pred h
Confidence 5
No 21
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=99.97 E-value=3.4e-30 Score=252.32 Aligned_cols=154 Identities=24% Similarity=0.377 Sum_probs=147.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|++++..++..+++.++||+||.||++.++..+.++|+.+ .+||.++++|.|..++|
T Consensus 169 i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~-----~~f~~iv~~G~n~~~~H 243 (440)
T 2v3z_A 169 VHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILH 243 (440)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCE-----ESSCCEEEEGGGGGSTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----CCCCCeEEEcCcccccc
Confidence 3468999999999999999999999999999999999999999999999999999863 25999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEe-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Q 021917 216 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 294 (305)
Q Consensus 216 g~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~ 294 (305)
+.|++++|++||+|+||+++.|+||++|++|||++ |+++++++++++++.++++++++++|||++++||++++.+++.+
T Consensus 244 ~~~~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~ 323 (440)
T 2v3z_A 244 YTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVS 323 (440)
T ss_dssp CCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999999999999864
No 22
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.97 E-value=1.1e-30 Score=243.73 Aligned_cols=147 Identities=30% Similarity=0.491 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCC---CCC
Q 021917 146 DQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD---SRK 222 (305)
Q Consensus 146 ~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~---~r~ 222 (305)
+||+.||+|+++++++++.+.+.++||+||.||++.++.++.++|++| +||. ++|.|+.++|++|+ +++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~~------~fp~--~vs~n~~~~H~~p~~~~~~~ 72 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKP------AFPV--NLSINEIAAHYTPYKGDTTV 72 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEE------SSCC--EEEETTEEECCCCCTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCCC------CCCc--EEeeCCccccccCCCCCCcc
Confidence 489999999999999999999999999999999999999999999987 4885 44689999999996 789
Q ss_pred CCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCceeee
Q 021917 223 LEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVEIK 302 (305)
Q Consensus 223 L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv~~ 302 (305)
|++||+|+||+++.++||++|++|||+||+ ++++++++++++++++|+++|||++++||+++++++++++||+++++
T Consensus 73 L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~~~ 149 (295)
T 1xgs_A 73 LKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVN 149 (295)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEECTT
T ss_pred ccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEECC
Confidence 999999999999999999999999999997 78899999999999999999999999999999999999999997664
Q ss_pred c
Q 021917 303 Q 303 (305)
Q Consensus 303 ~ 303 (305)
.
T Consensus 150 ~ 150 (295)
T 1xgs_A 150 L 150 (295)
T ss_dssp C
T ss_pred C
Confidence 3
No 23
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=99.97 E-value=2.7e-30 Score=249.79 Aligned_cols=165 Identities=19% Similarity=0.200 Sum_probs=150.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCc--eeeecCCCcc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPK--SCCTSVNEVI 213 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~--~v~ts~n~~~ 213 (305)
...+|+|||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.++|+...+. +..|+. ++++|.|...
T Consensus 151 i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~n~~~ 229 (401)
T 1chm_A 151 CMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFED-VELMDTWTWFQSGINTDG 229 (401)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSS-CCBCCCEEEEEEGGGGGS
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhccccCCC-ccccCcceeeeecccccc
Confidence 3468999999999999999999999999999999999999999999998888876543222 122555 4789999999
Q ss_pred ccCCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Q 021917 214 CHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 293 (305)
Q Consensus 214 ~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~ 293 (305)
+|+.|++++|++||+|+||+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++
T Consensus 230 ~H~~~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~ 309 (401)
T 1chm_A 230 AHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFL 309 (401)
T ss_dssp TTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred cccCCCCCccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCceee
Q 021917 294 MSGFSVEI 301 (305)
Q Consensus 294 ~~G~~vv~ 301 (305)
+.||....
T Consensus 310 ~~G~~~~~ 317 (401)
T 1chm_A 310 KHDVLQYR 317 (401)
T ss_dssp HHTCGGGB
T ss_pred HcCCCccc
Confidence 99997654
No 24
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=99.96 E-value=1.8e-29 Score=250.54 Aligned_cols=154 Identities=17% Similarity=0.305 Sum_probs=143.6
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc-CCCCCCCCCCCCCceeeecCCCccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA-GGYPSPLNYHFFPKSCCTSVNEVIC 214 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~-G~~psplny~~fp~~v~ts~n~~~~ 214 (305)
...+|+|||++||+.||+|++++.+++..+++.++||+||.||++.++..+.++ |+.. ..|+.+|++|.|..++
T Consensus 181 l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~~~-----~~~~~iv~sG~n~~~~ 255 (494)
T 2iw2_A 181 IVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRH-----SSYTCICGSGENSAVL 255 (494)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCE-----ESSCCEEEEGGGGGCS
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCCCc-----CCCCceEEEcCccccc
Confidence 346899999999999999999999999999999999999999999999988877 7653 3589999999999999
Q ss_pred cC----CCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEe-cCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 021917 215 HG----IPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVIN 289 (305)
Q Consensus 215 Hg----~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~ 289 (305)
|+ .|++++|++||+|+||+++.++||++|++|||+| |+++++++++|+++.++++++++++|||++++||+++++
T Consensus 256 Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~ 335 (494)
T 2iw2_A 256 HYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLAD 335 (494)
T ss_dssp SCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHH
T ss_pred cccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 94 6779999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHh
Q 021917 290 RHATM 294 (305)
Q Consensus 290 ~~~~~ 294 (305)
+++.+
T Consensus 336 ~~i~~ 340 (494)
T 2iw2_A 336 RIHLE 340 (494)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88743
No 25
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=99.96 E-value=2.2e-29 Score=247.40 Aligned_cols=157 Identities=20% Similarity=0.247 Sum_probs=141.0
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
+..+|+|||++||+.||+|++++.+++..+++.++||+||.||++.+...+ ..|.. +..||.+|++|.|.+++|
T Consensus 153 l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~-~~g~~-----~~~f~~IVasG~naa~~H 226 (451)
T 3rva_A 153 LHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAAS-RQGDN-----DVPYTSIVALNEHASILH 226 (451)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCTT-----TSSSCCEEEEGGGGGCTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH-HcCCC-----cCCcCcEEEECCcccccC
Confidence 446899999999999999999999999999999999999999998776553 33432 245999999999999999
Q ss_pred CCCCCCC-CCCCCEEEEEeeceeCcEEeceeeEEEecCC--CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021917 216 GIPDSRK-LEDGDIVNIDVTVYYKGVHGDLNETYFVGNA--DEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 292 (305)
Q Consensus 216 g~p~~r~-L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~--~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~ 292 (305)
++|++++ +++||+|+||+++.++||++|++|||++|++ +++++++++++.++++++++++|||++++||++++++++
T Consensus 227 ~~~~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i 306 (451)
T 3rva_A 227 YMQCDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGI 306 (451)
T ss_dssp CCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 9999875 6899999999999999999999999999987 789999999999999999999999999999999988776
Q ss_pred H----hcCCc
Q 021917 293 T----MSGFS 298 (305)
Q Consensus 293 ~----~~G~~ 298 (305)
. +.||.
T Consensus 307 ~~~l~~~G~~ 316 (451)
T 3rva_A 307 AQILHDTGMV 316 (451)
T ss_dssp HHHHHHTTSB
T ss_pred HHHHHhcCCc
Confidence 4 55553
No 26
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.96 E-value=1.8e-29 Score=241.30 Aligned_cols=150 Identities=24% Similarity=0.225 Sum_probs=141.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCC---
Q 021917 143 KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD--- 219 (305)
Q Consensus 143 Ks~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~--- 219 (305)
.|++||+.||+|++|++++++.+.+.++||+||.||++.++..+.+.|+.+. +++.+||++ +|.|++++|++|+
T Consensus 42 ~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~-~~~~aFpt~--~s~N~~~~H~~P~~~d 118 (360)
T 2nw5_A 42 TESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER-NNGIGFPAG--MSMNSCAAHYTVNPGE 118 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG-GGGEEEEEE--EEETTEEECCCCCTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCc-cCccccCce--eeccccccCCCCCccc
Confidence 4999999999999999999999999999999999999999999999998765 566789975 5899999999998
Q ss_pred -CCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCc
Q 021917 220 -SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS 298 (305)
Q Consensus 220 -~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~ 298 (305)
+++|++||+|+||+++.++||++|++|||+++ ++++++++++++|++++|+++|||++++||+++++++++++||+
T Consensus 119 ~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~~~G~~ 195 (360)
T 2nw5_A 119 QDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVE 195 (360)
T ss_dssp CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEE
T ss_pred CCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc
Confidence 78999999999999999999999999999994 68999999999999999999999999999999999999999874
No 27
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.96 E-value=7e-29 Score=244.05 Aligned_cols=162 Identities=9% Similarity=0.066 Sum_probs=148.9
Q ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCcHHHHHHHHHHHHHH-----cC-------------
Q 021917 135 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRP------GVTTDEIDRVVHEATIT-----AG------------- 190 (305)
Q Consensus 135 ~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~p------GvTe~EI~~~v~~~~~~-----~G------------- 190 (305)
....+|+|||++||+.||+|++++..++..+.+.++| |+||.||++.++.++.+ +|
T Consensus 170 ~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 249 (467)
T 3biq_A 170 GLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYK 249 (467)
T ss_dssp HHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCC
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHHHHHHHHHHHhhhhhhcCCcccccccccccc
Confidence 3456899999999999999999999999999999998 99999999999998887 55
Q ss_pred CCCCCCCCCCCCceeeecCCCc-cccCCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHH
Q 021917 191 GYPSPLNYHFFPKSCCTSVNEV-ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLE 269 (305)
Q Consensus 191 ~~psplny~~fp~~v~ts~n~~-~~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~ 269 (305)
+.+.. .+..||.++++|.|.. ++|+.|++++|++||+|+||+++.|+||++|++|||++| ++++++++|+++.++++
T Consensus 250 ~~~~~-~~~~f~~iv~~G~n~~~~~H~~~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~ 327 (467)
T 3biq_A 250 FNFDL-LDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQK 327 (467)
T ss_dssp CCGGG-EEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHH
T ss_pred CCccc-ccCCCCCeEEecCCcceeeccCCCCCccCCCCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 33221 1346999999999998 999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHH-cCCCCcHHHHHHHHHHHHHhcCCc
Q 021917 270 KAISI-VKPGVRFREIGEVINRHATMSGFS 298 (305)
Q Consensus 270 ~ai~~-~kPG~~~~eI~~ai~~~~~~~G~~ 298 (305)
+++++ +|||++++||+.++++++.+.|++
T Consensus 328 ~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g 357 (467)
T 3biq_A 328 EIVTNILKPGRTPKEVYESVIEYIEKTKPE 357 (467)
T ss_dssp HHHHHTCCTTCCHHHHHHHHHHHHHHHCGG
T ss_pred HHHHhCCcCCCcHHHHHHHHHHHHHHhCcc
Confidence 99999 999999999999999999999744
No 28
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=99.96 E-value=1.4e-28 Score=244.78 Aligned_cols=156 Identities=19% Similarity=0.126 Sum_probs=139.4
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
...+|+|||++||+.||+|++++.++++.+++.++||+||.||++.+...+ ..|.. +..||.+|++|.|.+++|
T Consensus 153 l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~-~~g~~-----~~sf~~IVasG~naa~~H 226 (517)
T 3l24_A 153 YHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLAT-QHSEN-----DNPYGNIVALNENCAILH 226 (517)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TCCGG-----GSSSCCEEEEGGGGGCTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-HcCCC-----cCCcCCEEEEcccccccc
Confidence 346899999999999999999999999999999999999999998776544 33331 346999999999999999
Q ss_pred CCCCCCC-CCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH--
Q 021917 216 GIPDSRK-LEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA-- 292 (305)
Q Consensus 216 g~p~~r~-L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~-- 292 (305)
++|+++. +++||+|+||+++.++||++|++|||++|+ +++++++++++.++++++++++|||++++||++++++++
T Consensus 227 ~~p~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~-~~e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i~~ 305 (517)
T 3l24_A 227 YTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTG-EGEFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVAQ 305 (517)
T ss_dssp CCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSS-CSHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHH
T ss_pred CCCCCCccccCCCEEEEeecEEECCEEEEeEEEEEcCC-CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999885 799999999999999999999999999997 478999999999999999999999999999999988776
Q ss_pred --HhcCCc
Q 021917 293 --TMSGFS 298 (305)
Q Consensus 293 --~~~G~~ 298 (305)
.+.||.
T Consensus 306 ~L~~~G~~ 313 (517)
T 3l24_A 306 TLSDFNIV 313 (517)
T ss_dssp HHHHTTSB
T ss_pred HHHhcCCc
Confidence 456663
No 29
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=99.96 E-value=1.2e-28 Score=240.68 Aligned_cols=162 Identities=15% Similarity=0.170 Sum_probs=144.7
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHH-HHH----HhcCCC--CcHHHHHHHHHHHHHHc--------CC--CCCCCCC
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLD-AAA----RMIRPG--VTTDEIDRVVHEATITA--------GG--YPSPLNY 198 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~-~~~----~~i~pG--vTe~EI~~~v~~~~~~~--------G~--~psplny 198 (305)
...+|+|||++||+.||+|++++..++. .+. +.++|| +||.||++.++.++.+. |+ +.....+
T Consensus 171 i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~ 250 (444)
T 3cb6_A 171 LAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLE 250 (444)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEE
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 4468999999999999999999999999 554 788999 99999999999888752 32 2111124
Q ss_pred CCCCceeeecCCCc-cccCCCCCCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 021917 199 HFFPKSCCTSVNEV-ICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKP 277 (305)
Q Consensus 199 ~~fp~~v~ts~n~~-~~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kP 277 (305)
..||.++++|.|.. ++|+.|++++|+ ||+|+||+++.|+||++|++|||+|| ++++++++++++.++++++++++||
T Consensus 251 ~~f~~iv~~g~n~~~~~H~~~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~p 328 (444)
T 3cb6_A 251 WCYTPIIQSGGSYDLKPSAITDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCRD 328 (444)
T ss_dssp ESSCCEEECTTCCCCSTTCCCCSSBCC-SSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCST
T ss_pred cccCceEeccCCcCceeccCCCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56999999999998 999999999998 99999999999999999999999998 8999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhc--CCce
Q 021917 278 GVRFREIGEVINRHATMS--GFSV 299 (305)
Q Consensus 278 G~~~~eI~~ai~~~~~~~--G~~v 299 (305)
|++++||++++++++.+. ||+.
T Consensus 329 G~~~~~v~~~~~~~~~~~~~g~~~ 352 (444)
T 3cb6_A 329 GAVIGDIYTKILGLIRAKRPDLEP 352 (444)
T ss_dssp TCBHHHHHHHHHHHHHHHCGGGGG
T ss_pred CCcHHHHHHHHHHHHHhhhhhhHh
Confidence 999999999999999998 5654
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=99.96 E-value=9.4e-29 Score=243.47 Aligned_cols=150 Identities=22% Similarity=0.280 Sum_probs=135.4
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH----HcCCCCCCCCCCCCCceeeecCCCcccc
Q 021917 140 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI----TAGGYPSPLNYHFFPKSCCTSVNEVICH 215 (305)
Q Consensus 140 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~----~~G~~psplny~~fp~~v~ts~n~~~~H 215 (305)
+.+||++||+.||+|++|++++|+.+.+.++||+||.||++.++..+. ++|+.. .++||+++ |+|+.++|
T Consensus 158 i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~~----g~~FP~iv--SvN~~v~H 231 (478)
T 1b6a_A 158 LDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNA----GLAFPTGC--SLNNCAAH 231 (478)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTE----EEEEEEEE--EETTEEEC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCCcc----cCCCCeEE--ECCCcccc
Confidence 345999999999999999999999999999999999999777776655 457631 24699754 57999999
Q ss_pred CCCC---CCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Q 021917 216 GIPD---SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 292 (305)
Q Consensus 216 g~p~---~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~ 292 (305)
++|+ +++|++||+|+||+++.++||++|++|||+|| +++++++++++++++++|+++|||++++||++++++++
T Consensus 232 g~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i 308 (478)
T 1b6a_A 232 YTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVM 308 (478)
T ss_dssp CCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred CCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9997 58999999999999999999999999999996 79999999999999999999999999999999999999
Q ss_pred HhcCCc
Q 021917 293 TMSGFS 298 (305)
Q Consensus 293 ~~~G~~ 298 (305)
+++||+
T Consensus 309 ~~~G~~ 314 (478)
T 1b6a_A 309 ESYEVE 314 (478)
T ss_dssp HTCEEE
T ss_pred HHcCCC
Confidence 999986
No 31
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=99.95 E-value=7.9e-29 Score=244.59 Aligned_cols=153 Identities=16% Similarity=0.259 Sum_probs=145.2
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----cHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCC
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGV-----TTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN 210 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGv-----Te~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n 210 (305)
...+|+|||++||+.||+|+++++.++..+.+.++||+ ||.||++.++.++.++|+.++ |+.++++|.|
T Consensus 223 v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~~~~~G~~~~------~~~ivasG~n 296 (470)
T 4b28_A 223 TEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVRRGGEWI------ETRLLASGPR 296 (470)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHHHHTTTCCEE------SCCCEEEGGG
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC------CCceeEEcCc
Confidence 44689999999999999999999999999999999999 999999999999999998753 6778999999
Q ss_pred CccccCCCCCCCCCCCCEEEEEeece-eCcEEeceeeEEEec--CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Q 021917 211 EVICHGIPDSRKLEDGDIVNIDVTVY-YKGVHGDLNETYFVG--NADEASRQLVQCTYECLEKAISIVKPGVRFREIGEV 287 (305)
Q Consensus 211 ~~~~Hg~p~~r~L~~GDiV~iDv~~~-~~GY~~D~~RT~~vG--~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~a 287 (305)
...+|+.|++++|++||+|+||+++. ++||++|++|||++| +++++++++|+++.++++++++++|||++++||+++
T Consensus 297 ~~~~H~~~~~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ 376 (470)
T 4b28_A 297 SNPWFQECGPRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIRTNMEMLKPGVMIPELSAN 376 (470)
T ss_dssp GSSTTCCCCSCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHT
T ss_pred cccCCCCCCCccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHH
Confidence 99999999999999999999999987 899999999999999 699999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 021917 288 INRHATM 294 (305)
Q Consensus 288 i~~~~~~ 294 (305)
+++++.+
T Consensus 377 ar~~i~~ 383 (470)
T 4b28_A 377 THVLDAK 383 (470)
T ss_dssp CCCCCHH
T ss_pred HHHHHHH
Confidence 9888776
No 32
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.93 E-value=8.6e-26 Score=229.87 Aligned_cols=160 Identities=18% Similarity=0.142 Sum_probs=144.2
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHH----hc-CCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCC
Q 021917 136 LQHVVEIKTPDQIERMRETCRIAREVLDAAAR----MI-RPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN 210 (305)
Q Consensus 136 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~----~i-~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n 210 (305)
...+|+|||++||+.||+|++++..++..+++ .+ +||+||.||++.++.+..+.+... ...||+++++|.|
T Consensus 315 i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g~~----~~sf~~iv~~G~n 390 (623)
T 3ctz_A 315 ICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADFV----DLSFPTISSTGPT 390 (623)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTEE----EESSCCEEEEGGG
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCCc----CCCCCceeeecCc
Confidence 44689999999999999999999998877664 46 899999999999987766543221 1359999999999
Q ss_pred CccccCCCC---CCCCCCCCEEEEEeeceeCcEEeceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHH
Q 021917 211 EVICHGIPD---SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKP-GVRFREIGE 286 (305)
Q Consensus 211 ~~~~Hg~p~---~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kP-G~~~~eI~~ 286 (305)
..++|+.|+ +++|++||+|+||+++.|+||++|++|||++|+++++++++|+++.+++.+++++++| |+++.+|+.
T Consensus 391 ~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~ 470 (623)
T 3ctz_A 391 GAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDS 470 (623)
T ss_dssp GGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGG
T ss_pred cccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHH
Confidence 999999996 8899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHhcCCce
Q 021917 287 VINRHATMSGFSV 299 (305)
Q Consensus 287 ai~~~~~~~G~~v 299 (305)
++++++.+.||..
T Consensus 471 ~ar~~l~~~G~~~ 483 (623)
T 3ctz_A 471 FARSALWDSGLDY 483 (623)
T ss_dssp GGTHHHHHTTCCC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999999863
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.78 E-value=4.8e-18 Score=169.56 Aligned_cols=163 Identities=17% Similarity=0.222 Sum_probs=140.1
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhc---------CCCCcHHHHHHHHHHHHHHcC--CCCCCCCC--CCCCceee
Q 021917 140 VEIKTPDQIERMRETCRIAREVLDAAARMI---------RPGVTTDEIDRVVHEATITAG--GYPSPLNY--HFFPKSCC 206 (305)
Q Consensus 140 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i---------~pGvTe~EI~~~v~~~~~~~G--~~psplny--~~fp~~v~ 206 (305)
..|.+++-++.||.|++|+..+|+.+.+.+ +||++..||......++.+.. .|....++ ..|| +|
T Consensus 38 kniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFP--T~ 115 (614)
T 4b6a_t 38 KNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIP--TT 115 (614)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEE--EE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccC--ce
Confidence 357889999999999999999999999877 556788899988888887754 35544443 3477 78
Q ss_pred ecCCCccccCCCC----------------------CCCCCCCCEEEEEeeceeCcEEeceeeEEEecC------------
Q 021917 207 TSVNEVICHGIPD----------------------SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGN------------ 252 (305)
Q Consensus 207 ts~n~~~~Hg~p~----------------------~r~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~------------ 252 (305)
+|+|++++|++|. +..|++||+|.||+|+..|||.+|.+.|++||.
T Consensus 116 ISvN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~~~~~ 195 (614)
T 4b6a_t 116 IDIDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQPTG 195 (614)
T ss_dssp EEETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTTTTTS
T ss_pred ecHHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccccccccc
Confidence 9999999999993 247999999999999999999999999999984
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHc----------------CCCCcHHHHHHHHHHHHHhcCCceeeecc
Q 021917 253 -ADEASRQLVQCTYECLEKAISIV----------------KPGVRFREIGEVINRHATMSGFSVEIKQL 304 (305)
Q Consensus 253 -~~~e~~~l~~~~~ea~~~ai~~~----------------kPG~~~~eI~~ai~~~~~~~G~~vv~~~~ 304 (305)
+.....+++.+++.|.+++++.+ +||++..+|..+|+++++.+||.+|++++
T Consensus 196 pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~gvt~~~It~~IekvaksY~ck~Vegl~ 264 (614)
T 4b6a_t 196 PLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGITGQLIRTIVDTIARSYNCGVVPGSR 264 (614)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHC----------------STTCBHHHHHHHHHHHHHTTTCEECTTCE
T ss_pred cccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCCCcchHHHHHHHHHHHhcCCcEEecccc
Confidence 34567789999999999999877 99999999999999999999999998753
No 34
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.85 E-value=8.3e-06 Score=57.71 Aligned_cols=41 Identities=32% Similarity=0.788 Sum_probs=35.2
Q ss_pred ccccccccCCccccccchhhhcCCCCCCCcccChhhhhhchhHHHHHh
Q 021917 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVH 58 (305)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h 58 (305)
....|..|++++.++|..|.. .+||+.+|.+.+|+.||..-
T Consensus 14 ~~~~C~~C~~~~~~~Cs~C~~-------v~YCs~~CQ~~~W~~Hk~~C 54 (60)
T 2dj8_A 14 SSESCWNCGRKASETCSGCNT-------ARYCGSFCQHKDWEKHHHIC 54 (60)
T ss_dssp CSCCCSSSCSCCCEECTTTSC-------CEESSHHHHHHTHHHHTTTS
T ss_pred CCcccccCCCCCcccCCCCCC-------EeeeCHHHHHHHHHHHHHHH
Confidence 447799999998899999984 67999999999999887654
No 35
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=97.70 E-value=1.2e-05 Score=56.85 Aligned_cols=42 Identities=31% Similarity=0.769 Sum_probs=35.7
Q ss_pred cccccccccCCccccccchhhhcCCCCCCCcccChhhhhhchhHHHHHh
Q 021917 10 TTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVH 58 (305)
Q Consensus 10 ~~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h 58 (305)
.....|..|++++.++|..|.. .+||+.+|.+.+|+.||..-
T Consensus 11 ~~~~~C~~C~~~~~~~Cs~C~~-------v~YCs~~CQ~~dW~~Hk~~C 52 (60)
T 2od1_A 11 DSSESCWNCGRKASETCSGCNT-------ARYCGSFCQHKDWEKHHHIC 52 (60)
T ss_dssp CCSSCCTTTSSCCCEECTTTSC-------CEESSHHHHHHHHHHHTTTS
T ss_pred CCCCccccCCCcccccCCCCCC-------eeecCHHHHHHHHHHHhHHH
Confidence 3457899999998899999984 67999999999999887654
No 36
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=97.69 E-value=2.7e-05 Score=56.88 Aligned_cols=41 Identities=22% Similarity=0.721 Sum_probs=36.3
Q ss_pred cccccccCCccccccchhhhcCCCCCCCcccChhhhhhchhHHHHHhh
Q 021917 12 SLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHL 59 (305)
Q Consensus 12 ~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h~ 59 (305)
.+.|..|++++.++|-.|.. .+||+.+|.+.+|+.||...+
T Consensus 15 ~~~C~~C~~~~~~~Cs~Ck~-------v~YCs~eCQ~~~W~~HK~~C~ 55 (70)
T 2d8q_A 15 RPRCAYCSAEASKRCSRCQN-------EWYCCRECQVKHWEKHGKTCV 55 (70)
T ss_dssp CCBCSSSCCBCCCBCTTTSC-------CBCSCHHHHHHTHHHHHHHCC
T ss_pred CCcCCCCCCcccccCCCCCC-------EeeCCHHHhHHHHHHHHHHHH
Confidence 46899999998899999984 679999999999999998775
No 37
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.60 E-value=1.6e-05 Score=54.40 Aligned_cols=41 Identities=29% Similarity=0.878 Sum_probs=33.4
Q ss_pred ccccccccCCccccccchhhhcCCCCCCCcccChhhhhhchhHHHHHh
Q 021917 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVH 58 (305)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h 58 (305)
....|..|++++.++|..|.. .+|||.+|.+.+|+.||..-
T Consensus 8 ~~~~C~~C~~~~~~~C~~C~~-------~~YCs~~CQ~~~W~~Hk~~C 48 (52)
T 2jw6_A 8 KEQSCVNCGREAMSECTGCHK-------VNYCSTFCQRKDWKDHQHIC 48 (52)
T ss_dssp ---CCSSSSSSCSEECTTTCS-------SEESSHHHHHHHTTTGGGTT
T ss_pred cCCcCCCCCCCCcCcCCCCCC-------EeecCHHHHHHHHHHHCHHH
Confidence 456799999998899999974 67999999999999887654
No 38
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=97.51 E-value=3.2e-05 Score=55.29 Aligned_cols=42 Identities=31% Similarity=0.734 Sum_probs=35.9
Q ss_pred ccccccccCCccccccchhhhcCCCCCCCcccChhhhhhchhHHHHHhh
Q 021917 11 TSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHL 59 (305)
Q Consensus 11 ~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h~ 59 (305)
....|..|++++.++|..|.. .+|||.+|.+.+|+.||...+
T Consensus 16 ~~~~C~~C~~~~~~~Cs~C~~-------~~YCs~~CQ~~~W~~Hk~~C~ 57 (64)
T 2odd_A 16 SSESCWNCGRKASETCSGCNT-------ARYCGSFCQHKDWEKHHHICG 57 (64)
T ss_dssp CSSSCTTTSSCCCEEETTTSC-------CEESSHHHHHHHHHHHTTTTT
T ss_pred CCCcCccccCCCcccCCCCCC-------hhhCCHHHHHHHHHHHhHHHh
Confidence 456799999998899999984 679999999999998887653
No 39
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=96.60 E-value=0.013 Score=54.83 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCcee--eec--CCCccccCCC-CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC--CTS--VNEVICHGIP-DSRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v--~ts--~n~~~~Hg~p-~~r~L~ 224 (305)
.+|++..++.++++.+.++++||++-.||++.+.+.+.+.|..+. |+..+ ..| ..+. +.-.+ ++.+|+
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~-p~i~~~~~~~l~ 311 (356)
T 3q6d_A 239 KLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEY------FGHSTGHGIGLEIHEA-PGLAFRSDTVLE 311 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------CCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccc------CCCCCcccCCCCcCcC-CCCCCCCCCCcC
Confidence 456677788899999999999999999999999999999885321 22111 122 1121 11112 467899
Q ss_pred CCCEEEEEeeceeCc-EEeceeeEEEecC
Q 021917 225 DGDIVNIDVTVYYKG-VHGDLNETYFVGN 252 (305)
Q Consensus 225 ~GDiV~iDv~~~~~G-Y~~D~~RT~~vG~ 252 (305)
+|.++.|+.+.+..| +-..+..|++|.+
T Consensus 312 ~Gmv~tiEPgiy~~g~~gvriEd~v~vt~ 340 (356)
T 3q6d_A 312 PGMAVTVEPGIYIPGIGGVRIEDDIIVTS 340 (356)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEECS
T ss_pred CCCEEEECCEEEECCCCeEEEccEEEEeC
Confidence 999999999999876 5667888888853
No 40
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=96.57 E-value=0.011 Score=56.02 Aligned_cols=95 Identities=20% Similarity=0.275 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCce----eeecCCCccccCCC-CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKS----CCTSVNEVICHGIP-DSRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~----v~ts~n~~~~Hg~p-~~r~L~ 224 (305)
.+|++..++.++++.+.++++||++-.||++.+.+.+.+.|.... |+.. +.....+. +.-.+ ++.+|+
T Consensus 259 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~------~~h~~GHgiGl~~hE~-P~i~~~~~~~L~ 331 (378)
T 4ege_A 259 DVAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAGLAEY------FVHRTGHGIGLCVHEE-PYIVAGNELPLV 331 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------CCSCSEEECSSSSSEE-EEECTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCc------CCCCCcccCCCCcCCC-CccCCCCCCccC
Confidence 456777788899999999999999999999999999999885321 2211 11111111 11112 467899
Q ss_pred CCCEEEEEeeceeCc-EEeceeeEEEec
Q 021917 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (305)
Q Consensus 225 ~GDiV~iDv~~~~~G-Y~~D~~RT~~vG 251 (305)
+|.++.|+.+.+..| +-..+.-|++|.
T Consensus 332 ~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 332 AGMAFSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp TTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCEEEeCCccEEEEeeEEEEe
Confidence 999999999999866 557788888885
No 41
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=96.38 E-value=0.016 Score=54.34 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCce----eeecCCCccccCCC-CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKS----CCTSVNEVICHGIP-DSRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~----v~ts~n~~~~Hg~p-~~r~L~ 224 (305)
.+|++..++.++++.+.++++||++-.||++.+.+.+.+.|.... |+.. +.....+. +...+ ++.+|+
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~-p~i~~~~~~~l~ 311 (356)
T 1wn1_A 239 RLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEY------FIHRTGHGLGLDVHEE-PYIGPDGEVILK 311 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTTTCGGG------CCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccc------CCCCCcccCCCccCCC-cccCCCCCCCcC
Confidence 456777788899999999999999999999999999998875321 2221 11222221 11112 467899
Q ss_pred CCCEEEEEeeceeCc-EEeceeeEEEec
Q 021917 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (305)
Q Consensus 225 ~GDiV~iDv~~~~~G-Y~~D~~RT~~vG 251 (305)
+|.++.|+.+.+..| +-..+.-|++|.
T Consensus 312 ~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 312 NGMTFTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCeeEeCCCcEEEEeeEEEEe
Confidence 999999999998754 666788888885
No 42
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=96.31 E-value=0.015 Score=52.14 Aligned_cols=99 Identities=23% Similarity=0.338 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC--ccccC-CC-CCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHG-IP-DSRKLED 225 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~--~~~Hg-~p-~~r~L~~ 225 (305)
.+|++..++.++++.+.++++||++-.||++.+.+.+.+.|..+.+ .+.++ .+.....+ .+.+. .+ ++++|++
T Consensus 131 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~-~~~GH--giG~~~he~p~i~~~~~~~~~~~L~~ 207 (262)
T 1o0x_A 131 RGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNVIR-DYVGH--GVGRELHEDPQIPNYGTPGTGVVLRK 207 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTCEECC-SSCEE--ECSSSSSEEEEECSCCCTTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccC-CcccC--cccccccCCCccCCCCCCCCCCccCC
Confidence 4567777888999999999999999999999999999988764211 11111 11111111 12221 12 3678999
Q ss_pred CCEEEEEeecee------------------CcEEeceeeEEEec
Q 021917 226 GDIVNIDVTVYY------------------KGVHGDLNETYFVG 251 (305)
Q Consensus 226 GDiV~iDv~~~~------------------~GY~~D~~RT~~vG 251 (305)
|.++.|+.+.+. +++-.-+.-|++|.
T Consensus 208 Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt 251 (262)
T 1o0x_A 208 GMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILIT 251 (262)
T ss_dssp TCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEECCEEEcCCCceeecCCCceEEeeCCCcEEEEEEEEEEC
Confidence 999999998876 23445567788874
No 43
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=96.30 E-value=0.014 Score=53.08 Aligned_cols=99 Identities=17% Similarity=0.169 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--cccC-CC-CCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHG-IP-DSRKLED 225 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~--~~Hg-~p-~~r~L~~ 225 (305)
.+|++.+++.++++.+++.++||++-.||++.+.+.+.+.|.... ..+.+. .+.....+. +.+. .+ ++.+|++
T Consensus 155 ~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~-~~~~GH--giG~~~hE~P~i~~~~~~~~~~~L~~ 231 (285)
T 3pka_A 155 EHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVV-RDFTGH--GIGTTFHNGLVVLHYDQPAVETIMQP 231 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEEC-CSSCEE--BCSSSSSCSCEECSSCCTTCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccC-CCcccc--cCCCcccCCCcccCccCCCCCCccCC
Confidence 456677788899999999999999999999999998888875321 111111 122222221 2221 12 4568999
Q ss_pred CCEEEEEeeceeC------------------cEEeceeeEEEec
Q 021917 226 GDIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (305)
Q Consensus 226 GDiV~iDv~~~~~------------------GY~~D~~RT~~vG 251 (305)
|.++.|+.+.+.. .|-.-+..|++|.
T Consensus 232 Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt 275 (285)
T 3pka_A 232 GMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVT 275 (285)
T ss_dssp TBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEEC
Confidence 9999999998862 3445677888885
No 44
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=96.27 E-value=0.023 Score=53.11 Aligned_cols=99 Identities=20% Similarity=0.287 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCC-CCCCCCCCCE
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP-DSRKLEDGDI 228 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p-~~r~L~~GDi 228 (305)
.+|++..++.++++.+.+.++||++-.||++.+.+.+.+.|.... +. ++..-.+.....+. +.-.+ ++.+|++|.+
T Consensus 236 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~-~~-h~~GHgiGl~~hE~-p~i~~~~~~~l~~Gmv 312 (351)
T 1wy2_A 236 KQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEY-FN-HSLGHGVGLEVHEW-PRVSQYDETVLREGMV 312 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG-CC-SCSEEECSSSSSEE-EEESTTCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-CC-CCcccccCCCcCCC-CccCCCCCCCcCCCCE
Confidence 456777788999999999999999999999999999999874321 00 01111122222221 11112 4678999999
Q ss_pred EEEEeeceeCc-EEeceeeEEEec
Q 021917 229 VNIDVTVYYKG-VHGDLNETYFVG 251 (305)
Q Consensus 229 V~iDv~~~~~G-Y~~D~~RT~~vG 251 (305)
+.|+.+.+..| +-..+.-|++|.
T Consensus 313 ~tiEPgiy~~g~~gvriEd~v~Vt 336 (351)
T 1wy2_A 313 ITIEPGIYIPKIGGVRIEDTILIT 336 (351)
T ss_dssp EEECCEEEETTTEEEECBEEEEEE
T ss_pred EEECCEEEeCCCCeEEEeeEEEEC
Confidence 99999999855 556677777774
No 45
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=96.26 E-value=0.021 Score=53.18 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCcee--eecC--CCccccCC-CCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSC--CTSV--NEVICHGI-PDSRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v--~ts~--n~~~~Hg~-p~~r~L~ 224 (305)
.+|++..++.++++.+.+.++||++-.||++.+.+.+.+.|.... |+..+ ..|. .+. +.-. .++.+|+
T Consensus 242 ~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~he~-p~i~~~~~~~l~ 314 (359)
T 2zsg_A 242 EVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEF------FGHSLGHGIGLEVHEG-PAISFRNDSPLP 314 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG------BCSCSEEECSSSSSEE-EEESTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccc------CCCCCccccCcccCCC-CCcCCCCCCCcC
Confidence 456777888999999999999999999999999999999875321 22111 1221 121 1111 1467899
Q ss_pred CCCEEEEEeeceeCc-EEeceeeEEEec
Q 021917 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (305)
Q Consensus 225 ~GDiV~iDv~~~~~G-Y~~D~~RT~~vG 251 (305)
+|.++.|+.+.+..| +-..+.-|++|.
T Consensus 315 ~gmv~tiEPgiy~~~~~gvriEd~v~vt 342 (359)
T 2zsg_A 315 ENVVFTVEPGIYLEGKFGIRIEEDVVLK 342 (359)
T ss_dssp TTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCEEEECCCcEEEEeeEEEEc
Confidence 999999999999866 466788888885
No 46
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=96.21 E-value=0.024 Score=50.72 Aligned_cols=99 Identities=22% Similarity=0.255 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC--ccccC-CC-CCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHG-IP-DSRKLED 225 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~--~~~Hg-~p-~~r~L~~ 225 (305)
.+|++.+++.++++.+.+.++||++-.||++.+.+.+.+.|..+. .++.++ .+.....+ .+.+. .+ ++++|++
T Consensus 120 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~-~~~~GH--giG~~~he~p~i~~~~~~~~~~~l~~ 196 (263)
T 2gg2_A 120 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVV-REYCGH--GIGRGFHEEPQVLHYDSRETNVVLKP 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCEEC-SSCCEE--ECSSSSSEEEEECSSCCTTCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEEC-CCcccc--cCCcceecCCcccCccCCCCCCCcCC
Confidence 456777788899999999999999999999999999998876421 011110 11111111 11221 12 4578999
Q ss_pred CCEEEEEeeceeC------------------cEEeceeeEEEec
Q 021917 226 GDIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (305)
Q Consensus 226 GDiV~iDv~~~~~------------------GY~~D~~RT~~vG 251 (305)
|.++.|+.+.+.. ++-..+..|++|.
T Consensus 197 Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 240 (263)
T 2gg2_A 197 GMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVT 240 (263)
T ss_dssp TCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEE
T ss_pred CCEEEEecEEEcCCCceEEcCCCceEEecCCCeEEEEEEEEEEC
Confidence 9999999988752 3455677788884
No 47
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=96.05 E-value=0.027 Score=50.43 Aligned_cols=98 Identities=13% Similarity=0.224 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--ccc-CCC-CCCCCCCC
Q 021917 151 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICH-GIP-DSRKLEDG 226 (305)
Q Consensus 151 mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~--~~H-g~p-~~r~L~~G 226 (305)
.|+...++.++++++++.++||++-.||+..+.+.+.+.|.... .++ ++-.+.....+. +.+ +.+ ++++|++|
T Consensus 119 ~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~~~-~~~--~GHgiG~~~~e~p~i~~~~~~~~~~~L~~G 195 (264)
T 3tb5_A 119 IDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVV-RDF--VGHGIGPTIHESPMIPHYGEAGKGLRLKEG 195 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEEC-CSC--CEEECSSSSSEEEEECSSCCTTCSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCcee-eec--eecCCCCCCccCCccCccccCCCCCCccCC
Confidence 45677788999999999999999999999999999988875321 011 111111111111 111 112 24589999
Q ss_pred CEEEEEeeceeC------------------cEEeceeeEEEec
Q 021917 227 DIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (305)
Q Consensus 227 DiV~iDv~~~~~------------------GY~~D~~RT~~vG 251 (305)
.++.|+-+.+.. |+-..+.-|++|-
T Consensus 196 mv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT 238 (264)
T 3tb5_A 196 MVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAIT 238 (264)
T ss_dssp CEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECC
T ss_pred cEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEc
Confidence 999999988753 3344566788884
No 48
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=96.02 E-value=0.03 Score=50.15 Aligned_cols=85 Identities=9% Similarity=0.149 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC--ccccC-CC-CCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHG-IP-DSRKLED 225 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~--~~~Hg-~p-~~r~L~~ 225 (305)
.+|++.+++.++++++.+.++||++-.||++.+.+.+.+.|..+. ..+.++ .+.....+ .+.+. .+ ++++|++
T Consensus 122 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~-~~~~GH--giG~~~hE~p~i~~~~~~~~~~~L~~ 198 (262)
T 3mx6_A 122 KPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVV-RDYTGH--GIGRVFHDKPSILNYGRNGTGLTLKE 198 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCEEC-CSCCEE--ECSSSSSEEEEECSSCCTTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccC-CCcccc--ccCCcccCCCcccccCCCCCCCEeCC
Confidence 356667778889999999999999999999999999998875421 011111 12222222 13332 23 4578999
Q ss_pred CCEEEEEeecee
Q 021917 226 GDIVNIDVTVYY 237 (305)
Q Consensus 226 GDiV~iDv~~~~ 237 (305)
|.++.|+.+.+.
T Consensus 199 Gmv~tiEPgiy~ 210 (262)
T 3mx6_A 199 GMFFTVEPMINA 210 (262)
T ss_dssp TCEEEECCEEES
T ss_pred CCEEEEeCEEEc
Confidence 999999999875
No 49
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=96.02 E-value=0.041 Score=52.81 Aligned_cols=98 Identities=12% Similarity=0.049 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcC-CCCCCCCCCCCCcee----eecCCCccccCCC-CCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAG-GYPSPLNYHFFPKSC----CTSVNEVICHGIP-DSRKL 223 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G-~~psplny~~fp~~v----~ts~n~~~~Hg~p-~~r~L 223 (305)
.+|++..++.++++.+.++++||++-.||+..+.+.+.+.| .+.. .|+..+ ...+.+.-..-.+ ++++|
T Consensus 307 ~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~-----~~~h~~GHgiGl~~he~p~~~~~~~~~~l 381 (444)
T 3cb6_A 307 EQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEP-----NFVRNLGAGIGIEFRESSLLVNAKNPRVL 381 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGG-----GBCSCCEEECSSSSCBGGGCCSTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHh-----hcccccccccCccccCCccccCCCCCccc
Confidence 45677778889999999999999999999999999999985 2321 122222 2222222110012 46789
Q ss_pred CCCCEEEEEeece-----------eCcEEeceeeEEEecC
Q 021917 224 EDGDIVNIDVTVY-----------YKGVHGDLNETYFVGN 252 (305)
Q Consensus 224 ~~GDiV~iDv~~~-----------~~GY~~D~~RT~~vG~ 252 (305)
++|.++.|+.+.+ .+++-..+.-|++|.+
T Consensus 382 ~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~ 421 (444)
T 3cb6_A 382 QAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITR 421 (444)
T ss_dssp CTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCS
T ss_pred CCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECC
Confidence 9999999999987 3457778999999953
No 50
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.98 E-value=0.003 Score=60.91 Aligned_cols=42 Identities=29% Similarity=0.715 Sum_probs=34.5
Q ss_pred cccccccCCc--cccccchhhhcCCCCCCCcccChhhhhhchhHHHHHhhh
Q 021917 12 SLSCVRCGKP--AHLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60 (305)
Q Consensus 12 ~~~c~~c~~~--~~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h~~ 60 (305)
...|..|+++ ....|+.|.. .+|||.+|.+.+|+.||...+.
T Consensus 47 ~~~C~~C~~~~~~~~~C~~C~~-------~~yCs~~Cq~~~w~~Hk~eC~~ 90 (429)
T 3qwp_A 47 GVVCDRCLLGKEKLMRCSQCRV-------AKYCSAKCQKKAWPDHKRECKC 90 (429)
T ss_dssp TTBCTTTCCBCSSCEECTTTSC-------CEESSHHHHHHTHHHHHHHHHH
T ss_pred CCcCcCCCCcCCCCCcCCCCCC-------cccCChhhhhhhhhhhHHhhhh
Confidence 4579999984 3488999974 5699999999999999987754
No 51
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=95.94 E-value=0.042 Score=51.64 Aligned_cols=95 Identities=17% Similarity=0.264 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCce----eeecCCCccccCCC-CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKS----CCTSVNEVICHGIP-DSRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~----v~ts~n~~~~Hg~p-~~r~L~ 224 (305)
.+|++..++.++++.+.+.++||++-.||+..+.+.+.+.|.... |+.. +...+.+. +...| ++++|+
T Consensus 260 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~------~~h~~GHgiGl~~hE~-P~i~~~~~~~L~ 332 (377)
T 4fkc_A 260 EVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEY------FIHRTGHGLGIDVHEE-PYISPGNKKILK 332 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTTCTTT------CCSCSEEECSSSSSEE-EEECSSCCCBCC
T ss_pred HHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHhccccc------CCCCCeEeCCCccccC-CcccCCCCCEeC
Confidence 346667778889999999999999999999999999988875321 2221 11112221 11223 457899
Q ss_pred CCCEEEEEeeceeCc-EEeceeeEEEec
Q 021917 225 DGDIVNIDVTVYYKG-VHGDLNETYFVG 251 (305)
Q Consensus 225 ~GDiV~iDv~~~~~G-Y~~D~~RT~~vG 251 (305)
+|.++.|+-+.|..| +-.-+.-|++|.
T Consensus 333 ~Gmv~tiEPgiy~~g~~GvriEd~v~Vt 360 (377)
T 4fkc_A 333 DGMVFTIEPGIYLQGKFGVRIEDDVALV 360 (377)
T ss_dssp TTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCEEEECCeeEECCccEEEEccEEEEE
Confidence 999999999998766 445567788774
No 52
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=95.94 E-value=0.026 Score=49.97 Aligned_cols=99 Identities=19% Similarity=0.280 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC---ccccCC-C-CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE---VICHGI-P-DSRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~---~~~Hg~-p-~~r~L~ 224 (305)
.+|++..++.++++.+.++++||++-.||++.+.+.+.+.|..+. .++.++ .+.....+ .+.+.. + ++.+|+
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~-~~~~GH--giG~~~he~p~~i~~~~~~~~~~~l~ 194 (252)
T 1qxy_A 118 MKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVI-KNLTGH--GVGLSLHEAPAHVLNYFDPKDKTLLT 194 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEEC-TTCCEE--ECSSSSSEEEEEECSSCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-CCcccc--ccCcccccCCccccCCCCCCCCCCcc
Confidence 456677788899999999999999999999999999998875421 111111 11111111 112221 2 467899
Q ss_pred CCCEEEEEeecee------------------CcEEeceeeEEEec
Q 021917 225 DGDIVNIDVTVYY------------------KGVHGDLNETYFVG 251 (305)
Q Consensus 225 ~GDiV~iDv~~~~------------------~GY~~D~~RT~~vG 251 (305)
+|.++.|+.+.+. +++-.-+..|++|.
T Consensus 195 ~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 239 (252)
T 1qxy_A 195 EGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVT 239 (252)
T ss_dssp TTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECC
T ss_pred CCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEEC
Confidence 9999999998764 23555677888874
No 53
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=95.93 E-value=0.067 Score=51.60 Aligned_cols=101 Identities=22% Similarity=0.295 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH----cCCCC------------CCCCCCCCCceeeecCCCcc
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATIT----AGGYP------------SPLNYHFFPKSCCTSVNEVI 213 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~----~G~~p------------splny~~fp~~v~ts~n~~~ 213 (305)
.+|++-.++.++++.+.++++||++-.||.+.+.+.+.+ .|.-. ..+-.|+..-.+...+.+ .
T Consensus 285 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he-~ 363 (440)
T 2v3z_A 285 AQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHD-V 363 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSC-C
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCccccc-C
Confidence 356677788899999999999999999999998877753 33210 001011111112222222 1
Q ss_pred ccCCC-CCCCCCCCCEEEEEeeceeC----------cEEeceeeEEEec
Q 021917 214 CHGIP-DSRKLEDGDIVNIDVTVYYK----------GVHGDLNETYFVG 251 (305)
Q Consensus 214 ~Hg~p-~~r~L~~GDiV~iDv~~~~~----------GY~~D~~RT~~vG 251 (305)
++..+ ++++|++|.++.|+.+.|.. |+-..+.-|++|.
T Consensus 364 p~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 364 GVYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp SCCCGGGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred CCcCCCCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 22222 45789999999999999976 5788899999995
No 54
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=95.91 E-value=0.0027 Score=61.51 Aligned_cols=42 Identities=26% Similarity=0.610 Sum_probs=34.8
Q ss_pred cccccccCCcc--ccccchhhhcCCCCCCCcccChhhhhhchhHHHHHhhh
Q 021917 12 SLSCVRCGKPA--HLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60 (305)
Q Consensus 12 ~~~c~~c~~~~--~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h~~ 60 (305)
...|..|++.. .+.|+.|.. .+|||.+|++.+|..||...+.
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~-------~~yCs~~Cq~~~w~~Hk~eC~~ 92 (433)
T 3qww_A 49 GHHCECCFARKEGLSKCGRCKQ-------AFYCDVECQKEDWPLHKLECSS 92 (433)
T ss_dssp TTBCTTTCCBCSSCEECTTTSC-------CEESSHHHHHHHHHHHTTTHHH
T ss_pred CCcCCcccccCCCCCCCCCCcc-------eeecChhhhhhhhhHHHHHHHH
Confidence 46799999853 388999983 6799999999999999987754
No 55
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=95.85 E-value=0.025 Score=51.46 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH----HHc--CCCCCCCCCCCCCceeeecCCCc--cccCC-C-C
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEAT----ITA--GGYPSPLNYHFFPKSCCTSVNEV--ICHGI-P-D 219 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~----~~~--G~~psplny~~fp~~v~ts~n~~--~~Hg~-p-~ 219 (305)
.+|++.+++.++++.+.+.++||++-.||++.+.+.+ .+. |..+. .++.+. .+.....+. +.+.. + +
T Consensus 149 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~~~~~~~g~~~~-~~~~GH--giG~~~hE~P~i~~~~~~~~ 225 (286)
T 3tav_A 149 SDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQFDRAFGIV-DGYGGH--GIGRSMHLDPFLPNEGAPGK 225 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHHTCCCEEC-TTCCEE--ECSSSSSEEEEECSSCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCccc-CCcccC--cccccccCCccccCcCCCCC
Confidence 3566777888999999999999999999999999999 777 54221 111111 111111111 22211 2 4
Q ss_pred CCCCCCCCEEEEEeeceeC------------------cEEeceeeEEEec
Q 021917 220 SRKLEDGDIVNIDVTVYYK------------------GVHGDLNETYFVG 251 (305)
Q Consensus 220 ~r~L~~GDiV~iDv~~~~~------------------GY~~D~~RT~~vG 251 (305)
+.+|++|.++.|+.+.+.. +|-.-+.-|++|.
T Consensus 226 ~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt 275 (286)
T 3tav_A 226 GPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVT 275 (286)
T ss_dssp SSBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECC
T ss_pred CCCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEEC
Confidence 5789999999999998853 4566777888885
No 56
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=95.79 E-value=0.056 Score=52.30 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCCcHHHHHHHHHHHHHHcC-CCCCCCCCCCCCcee----eecCCCc--cccCCCC-
Q 021917 149 ERMRETCRIAREVLDAAARM-IRPGVTTDEIDRVVHEATITAG-GYPSPLNYHFFPKSC----CTSVNEV--ICHGIPD- 219 (305)
Q Consensus 149 e~mR~A~~ia~~~l~~~~~~-i~pGvTe~EI~~~v~~~~~~~G-~~psplny~~fp~~v----~ts~n~~--~~Hg~p~- 219 (305)
+.+|++..++.++++.+.++ ++||++-.||++.+.+.+.+.| .+.. .|+..+ .....+. +.+. -+
T Consensus 313 ~~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~-----~~~h~~GHgiGl~~hE~p~~~~~-~~~ 386 (467)
T 3biq_A 313 EEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVP-----NFTKNIGSLIGLEFRDSNFILNV-KND 386 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGG-----GBCSCCEEECSSSSCCGGGBSST-TCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhh-----cCCCCcccccccccccCCccCCC-CCC
Confidence 34577778888999999999 9999999999999999999987 2321 122222 2222222 1111 13
Q ss_pred CCCCCCCCEEEEEeece-e------CcEEeceeeEEEec
Q 021917 220 SRKLEDGDIVNIDVTVY-Y------KGVHGDLNETYFVG 251 (305)
Q Consensus 220 ~r~L~~GDiV~iDv~~~-~------~GY~~D~~RT~~vG 251 (305)
+++|++|.++.|+.+.+ . +.|-.-+.-|++|.
T Consensus 387 ~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 387 YRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp SCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred CCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 67899999999999998 4 46777888999996
No 57
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.63 E-value=0.0049 Score=60.62 Aligned_cols=42 Identities=29% Similarity=0.687 Sum_probs=34.5
Q ss_pred cccccccCCcc--ccccchhhhcCCCCCCCcccChhhhhhchhHHHHHhhh
Q 021917 12 SLSCVRCGKPA--HLQCPKCMELKLPREGAAFCTQDCFKASWTSHKSVHLK 60 (305)
Q Consensus 12 ~~~c~~c~~~~--~l~cp~c~~~~~~~~~~~fc~q~cfk~~w~~hk~~h~~ 60 (305)
...|..|++.. .+.|+.|.. .+|||.+|.+.+|+.||...+.
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~-------~~yCs~~Cq~~~w~~Hk~eC~~ 92 (490)
T 3n71_A 49 NFVCHTCFKRQEKLHRCGQCKF-------AHYCDRTCQKDAWLNHKNECAA 92 (490)
T ss_dssp TTBCTTTCCBCSCCEECTTTSC-------CEESSHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCCCCCC-------cCcCCHHHhhhhhhHHHHHhHH
Confidence 46799998743 388999974 5699999999999999987754
No 58
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=95.40 E-value=0.069 Score=50.46 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCC------CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGI------PDSRKL 223 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~------p~~r~L 223 (305)
.+|++..++.++++.+.+.++||++-.||++.+.+.+.+.|.... +. +++.-.+...+.+. +|++ .++.+|
T Consensus 272 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~G~~~~-~~-~~~GHgiG~~~He~-~~~~g~~~~~~~~~~l 348 (402)
T 1kp0_A 272 ASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZWDLLRY-RT-FGYGHSFGVLBHYY-GREAGVELREDIZTVL 348 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGG-BC-SCSCBBCEEEETTE-ECCTTCBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCee-cC-CCcccccCCccccC-CcccCcccCCCCCCcc
Confidence 456777788899999999999999999999999999999885421 00 11111122211211 2221 245789
Q ss_pred CCCCEEEEEeeceeC----cE-EeceeeEEEec
Q 021917 224 EDGDIVNIDVTVYYK----GV-HGDLNETYFVG 251 (305)
Q Consensus 224 ~~GDiV~iDv~~~~~----GY-~~D~~RT~~vG 251 (305)
++|.++.|+.+.+.. |. -.-+.-+++|.
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~~~~G~ried~v~Vt 381 (402)
T 1kp0_A 349 EPGMVVSMEPMVMBPEGEPGAGGYREHDILVIK 381 (402)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEEE
T ss_pred CCCcEEEECCceeecCccCCCCcEEEEEEEEEc
Confidence 999999999999876 53 33455666664
No 59
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=95.36 E-value=0.042 Score=51.27 Aligned_cols=100 Identities=16% Similarity=0.233 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC--ccccCCCC--CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHGIPD--SRKLED 225 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~--~~~Hg~p~--~r~L~~ 225 (305)
..|++.+++.+++++++++++||++-.||++.+.+.+.+.|.... ..+.+. .+.....+ .+.|...+ +++|++
T Consensus 189 ~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~-~~~~GH--GIG~~~HE~P~i~~~~~~~~~~~L~~ 265 (329)
T 2b3h_A 189 GARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVV-RSYCGH--GIHKLFHTAPNVPHYAKNKAVGVMKS 265 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEEC-CSCCEE--ECSSSSSEEEEECCSSSCCCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCcc-CCcccC--CcCcccccCCcccccccCCCCCEECC
Confidence 456677788899999999999999999999999999999885421 011110 11111111 12332211 368999
Q ss_pred CCEEEEEeeceeC-----------------c-EEeceeeEEEecC
Q 021917 226 GDIVNIDVTVYYK-----------------G-VHGDLNETYFVGN 252 (305)
Q Consensus 226 GDiV~iDv~~~~~-----------------G-Y~~D~~RT~~vG~ 252 (305)
|.++.|+.+.+.. | +-..+..|++|.+
T Consensus 266 GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVTe 310 (329)
T 2b3h_A 266 GHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTD 310 (329)
T ss_dssp TCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEECS
T ss_pred CCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEcC
Confidence 9999999988742 2 4456778888853
No 60
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=95.32 E-value=0.046 Score=51.90 Aligned_cols=99 Identities=12% Similarity=0.131 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC--ccccCC-C-CCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE--VICHGI-P-DSRKLED 225 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~--~~~Hg~-p-~~r~L~~ 225 (305)
.+|++.+++.+++++++++++||++-.||++.+.+.+.+.|.... ..+.+. .+.....+ .+.|+. + ++++|++
T Consensus 220 e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~-~~~~GH--GIG~~vHE~P~i~~~~~~~~~~~L~~ 296 (368)
T 3s6b_A 220 EGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVV-RSYSGH--GVGKLFHSNPTVPHFKKNKAVGIMKP 296 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEEC-CSCCEE--ECSSSSSEEEEECSSSSCCCCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcc-cceeeC--CCCccccCCCccccccCCCCCCEECC
Confidence 356677788899999999999999999999999999988875321 111111 11111111 133321 1 3468999
Q ss_pred CCEEEEEeeceeC-----------------c-EEeceeeEEEec
Q 021917 226 GDIVNIDVTVYYK-----------------G-VHGDLNETYFVG 251 (305)
Q Consensus 226 GDiV~iDv~~~~~-----------------G-Y~~D~~RT~~vG 251 (305)
|.++.|+.+.+.. | +-..+..|++|.
T Consensus 297 GMVfTIEPgiy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVT 340 (368)
T 3s6b_A 297 GHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLIT 340 (368)
T ss_dssp TCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEE
T ss_pred CCEEEEcCeEEcCcccccccCCCceeEeeCCccEEEEeEEEEEc
Confidence 9999999988752 2 345677888884
No 61
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=95.14 E-value=0.12 Score=47.21 Aligned_cols=84 Identities=23% Similarity=0.274 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceee-ecCCC--ccccC-CCC-CCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC-TSVNE--VICHG-IPD-SRKLE 224 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~-ts~n~--~~~Hg-~p~-~r~L~ 224 (305)
..++..+++.++++.+++.++||++-.||++.+.+.+.+.|..+- .++.+. .+. ....+ .++|. .++ +.+|+
T Consensus 103 ~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G~~~~-~~~~GH--gIG~l~~He~p~ip~~~~~~~~~~L~ 179 (295)
T 1xgs_A 103 EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPI-VNLSGH--KIERYKLHAGISIPNIYRPHDNYVLK 179 (295)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEEC-TTCCEE--ECBTTBSSCSCEECSSCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCCCeEE-CCCcCC--CCCCcccCCCCcCCccCCCCCCCEeC
Confidence 355677788999999999999999999999999999998875321 111111 011 01111 12332 233 67899
Q ss_pred CCCEEEEEeece
Q 021917 225 DGDIVNIDVTVY 236 (305)
Q Consensus 225 ~GDiV~iDv~~~ 236 (305)
+|.++.|+.+.+
T Consensus 180 ~GmV~tIEP~i~ 191 (295)
T 1xgs_A 180 EGDVFAIEPFAT 191 (295)
T ss_dssp TTCEEEECCEEE
T ss_pred CCCEEEEcceeE
Confidence 999999999877
No 62
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=95.10 E-value=0.13 Score=49.64 Aligned_cols=101 Identities=15% Similarity=0.333 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc----CCCCCCCCC-CCCCceeeecCCCccccCCC--CCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA----GGYPSPLNY-HFFPKSCCTSVNEVICHGIP--DSRK 222 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~----G~~psplny-~~fp~~v~ts~n~~~~Hg~p--~~r~ 222 (305)
..|++..++.++++++.++++||++-.||...+.+.+.+. |.......| ..|+-.+.-+.. .-.|-.| .+++
T Consensus 281 ~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG-l~vhe~~~~~~~~ 359 (427)
T 3ig4_A 281 RQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG-LDTHDVGTYKDRV 359 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS-SSSSCCCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC-cCCCcCCCCCCCE
Confidence 3466777888999999999999999999999988887764 432100000 012222211111 1123333 5679
Q ss_pred CCCCCEEEEEeeceeC--cEEeceeeEEEec
Q 021917 223 LEDGDIVNIDVTVYYK--GVHGDLNETYFVG 251 (305)
Q Consensus 223 L~~GDiV~iDv~~~~~--GY~~D~~RT~~vG 251 (305)
|++|.++.|+.+.|.. |+-..+.-|++|.
T Consensus 360 L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 360 LEEGMVITIEPGLYIEEESIGIRIEDDILVT 390 (427)
T ss_dssp CCTTCEEEECCEEEEGGGTEEEECBEEEEEC
T ss_pred eCCCCEEEECCEEEECCCceEEEEeeEEEEe
Confidence 9999999999998864 5677889999995
No 63
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.90 E-value=0.013 Score=40.63 Aligned_cols=39 Identities=28% Similarity=0.824 Sum_probs=30.0
Q ss_pred CCCCcccccc--ccccccCCccccccchhhhcCCCCCCCcccChhhhhh
Q 021917 3 GGSDAAETTS--LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKA 49 (305)
Q Consensus 3 ~~~~~~~~~~--~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~ 49 (305)
|.++++.+.. ..|.-|+.+++-.||.|. ..|||-.|||.
T Consensus 1 ~~~~~~~~~~~~~~C~vC~~~~kY~CPrC~--------~~yCSl~C~k~ 41 (56)
T 2yqq_A 1 GSSGSSGLKCSTVVCVICLEKPKYRCPACR--------VPYCSVVCFRK 41 (56)
T ss_dssp CCCCCCCCCCCCCCCTTTCSCCSEECTTTC--------CEESSHHHHHH
T ss_pred CCCcccccCCCCCccCcCcCCCeeeCCCCC--------CCeeCHHHHHH
Confidence 4555665544 469999998889999996 45999999875
No 64
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=94.64 E-value=0.17 Score=47.91 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCC------CCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGI------PDSRKL 223 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~------p~~r~L 223 (305)
.+|++..++.++++++.++++||++-.||++.+.+.+.+.|.... +. +++.-.+....++ .+|+. .++.+|
T Consensus 272 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~G~~~~-~~-~~~GHgiG~~~h~-~~~~~g~~~~~~~~~~L 348 (401)
T 1chm_A 272 DHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQY-RT-FGYGHSFGTLSHY-YGREAGLELREDIDTVL 348 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCGGG-BC-SCSCBBCSBEETT-EECCTTSBCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcc-cC-CCCCcccCccCCc-cccccCccccCCCCCcc
Confidence 456777788899999999999999999999999999998885321 00 1111111111111 12211 145789
Q ss_pred CCCCEEEEEeeceeC----cE-EeceeeEEEec
Q 021917 224 EDGDIVNIDVTVYYK----GV-HGDLNETYFVG 251 (305)
Q Consensus 224 ~~GDiV~iDv~~~~~----GY-~~D~~RT~~vG 251 (305)
++|.++.|+.+.+.. |. -.-+.-+++|.
T Consensus 349 ~~Gmv~tiEPgiy~~~~~~g~~GvriEd~vlVt 381 (401)
T 1chm_A 349 EPGMVVSMEPMIMLPEGLPGAGGYREHDILIVN 381 (401)
T ss_dssp CTTCEEEECCEEEECTTSTTCEEEECBEEEEEE
T ss_pred CCCCEEEEcCeeeeccccCCCCeEEEeeeEEEC
Confidence 999999999999864 43 34556666664
No 65
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=94.16 E-value=0.017 Score=40.39 Aligned_cols=39 Identities=31% Similarity=0.866 Sum_probs=28.8
Q ss_pred CCCCcccccc-ccccccCC----ccccccchhhhcCCCCCCCcccChhhhhh
Q 021917 3 GGSDAAETTS-LSCVRCGK----PAHLQCPKCMELKLPREGAAFCTQDCFKA 49 (305)
Q Consensus 3 ~~~~~~~~~~-~~c~~c~~----~~~l~cp~c~~~~~~~~~~~fc~q~cfk~ 49 (305)
|.+++-.|.. ..|.-|++ +++-.||.|. ..|||-.|+|.
T Consensus 1 ~~~~~s~m~~~~~C~vC~~~~~~~akY~CPrC~--------~rYCSl~C~k~ 44 (59)
T 1x4s_A 1 GSSGSSGMEPAGPCGFCPAGEVQPARYTCPRCN--------APYCSLRCYRT 44 (59)
T ss_dssp CCCCCSSCCCCEEECSSCTTCCEEECEECTTTC--------CEESSHHHHHH
T ss_pred CCCCCCCCCCCCcCcCCCCCcCCCccccCcCCC--------CCccChHHHHH
Confidence 4455555554 57999984 6779999986 34999999993
No 66
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=93.66 E-value=0.56 Score=45.44 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 021917 151 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI 187 (305)
Q Consensus 151 mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~ 187 (305)
.++...++.++.++++++++||++-.||++.+++.+.
T Consensus 271 ~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i~ 307 (451)
T 3rva_A 271 FRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIA 307 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 4567788999999999999999999999998877654
No 67
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=93.42 E-value=0.34 Score=46.26 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCC--C----ccccCC------
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN--E----VICHGI------ 217 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n--~----~~~Hg~------ 217 (305)
..++...++.+++..+++.++||++-.||...+.+.+.+.|..+. .++.+ -..|.. + .+.+..
T Consensus 145 ~~~~l~~~~~~a~~~~i~~~kPG~~~~dI~~ai~~~~~~~G~~~v-~~~~G----HGIG~~~HE~P~~i~~~~~~~~~~~ 219 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI-EGMLS----HQLKQHVIDGEKTIIQNPTDQQKKD 219 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEEC-TTCEE----EEEBTTBSSCSCEEESSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCccc----ccCCCccccCCcccccCCCcccccC
Confidence 356677788899999999999999999999999999998875431 12111 112211 1 011110
Q ss_pred CCCCCCCCCCEEEEEeecee
Q 021917 218 PDSRKLEDGDIVNIDVTVYY 237 (305)
Q Consensus 218 p~~r~L~~GDiV~iDv~~~~ 237 (305)
.++.+|++|.++.|+.+++.
T Consensus 220 ~~~~~L~~GmV~tIEP~i~~ 239 (401)
T 2q8k_A 220 HEKAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp SCCCBCCTTCEEEEEEEEES
T ss_pred CCCCEeCCCCEEEEeCceEe
Confidence 13568999999999999874
No 68
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=93.06 E-value=0.14 Score=48.24 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC------C--CCCCCCCCCceeeecC---CC--ccccC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGY------P--SPLNYHFFPKSCCTSV---NE--VICHG 216 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~------p--splny~~fp~~v~ts~---n~--~~~Hg 216 (305)
..++..+++.+++++++++++||++-.||++.+.+.+.+.|.. + .-.++.+ -..|. .+ .+.|.
T Consensus 153 ~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~~~G~~~~g~~~~~~~v~~~~G----HgIG~y~iHe~P~I~~~ 228 (360)
T 2nw5_A 153 NLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHG----HSISQFRIHGGISIPAV 228 (360)
T ss_dssp GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCE----EEEBTTBSCCSCEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccccccccccccCCeeE----eeecCceeccCCEeccc
Confidence 3556677888999999999999999999999999998887631 0 0001111 11222 11 12222
Q ss_pred CC-CCCCCCCCCEEEEEeecee-CcEEeceeeE
Q 021917 217 IP-DSRKLEDGDIVNIDVTVYY-KGVHGDLNET 247 (305)
Q Consensus 217 ~p-~~r~L~~GDiV~iDv~~~~-~GY~~D~~RT 247 (305)
.+ ++.+|++|+++.|+.+.+- .|+--|-.++
T Consensus 229 ~~~~~~~Le~GmV~aIEP~i~~G~G~Vr~~~~~ 261 (360)
T 2nw5_A 229 NNRDTTRIKGDSFYAVETFATTGKGSIDDRPPC 261 (360)
T ss_dssp CCCCCCBCCSSEEEEEEEEEESSCSCCEECSCC
T ss_pred cCCCCcEEeCCcEEEEeceEECCcceEEeCCce
Confidence 22 4568999999999999872 3443343333
No 69
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=92.32 E-value=0.16 Score=49.68 Aligned_cols=96 Identities=15% Similarity=0.164 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecC-CC--ccccC-----CCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSV-NE--VICHG-----IPDSR 221 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~-n~--~~~Hg-----~p~~r 221 (305)
.+|++..++.++++++.++++||++-.||++.+.+.+.+.+.+. |+... -..|. .+ .+.+. ..++.
T Consensus 345 ~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~~~~~----~~~~G--HGIGl~HE~P~i~~~~~~~~~~~~~ 418 (470)
T 4b28_A 345 DMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQK----YGCLM--HGVGLCDEWPLVAYPDHAVAGAYDY 418 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHHHTTC----CSCSE--EEESSSEEEEEECCTTTCCTTSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhhhcC----CCCcc--CCCCcCCCCCcccCccccccCCCCC
Confidence 45677778889999999999999999999998776655533221 11000 11221 10 11111 12467
Q ss_pred CCCCCCEEEEEeecee--CcEEeceeeEEEec
Q 021917 222 KLEDGDIVNIDVTVYY--KGVHGDLNETYFVG 251 (305)
Q Consensus 222 ~L~~GDiV~iDv~~~~--~GY~~D~~RT~~vG 251 (305)
+|++|.++.|+.+.+. +.+-.-+.-|++|.
T Consensus 419 ~L~~GMV~tiEPgiy~~~g~~GvriEd~vlVt 450 (470)
T 4b28_A 419 PLEPGMTLCVEALISEEGGDFSIKLEDQVLIT 450 (470)
T ss_dssp BCCTTCEEEEEEEEECTTCSCEEEEEEEEEEC
T ss_pred EECCCCEEEEcCeeecCCCcEEEEEeeEEEEe
Confidence 8999999999998875 34677889999995
No 70
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=92.23 E-value=0.23 Score=48.63 Aligned_cols=95 Identities=9% Similarity=0.090 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC--CCCCCCCCCCceeeec-----CCCc--cccCCC-
Q 021917 149 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGY--PSPLNYHFFPKSCCTS-----VNEV--ICHGIP- 218 (305)
Q Consensus 149 e~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~--psplny~~fp~~v~ts-----~n~~--~~Hg~p- 218 (305)
+..++...++.+++..+++.++||++-.||...+.+.+.+.|.. +..+.+..|+..+.=| ..+. ++|..+
T Consensus 271 ~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGGl~iHE~P~vP~~~~~ 350 (478)
T 1b6a_A 271 PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVKGG 350 (478)
T ss_dssp GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBTTBSCCSCEEESSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCcccccccceeecCcceeCCCCccccCCCccceecCC
Confidence 35677888899999999999999999999999999999988742 0000000112222211 2221 344433
Q ss_pred CCCCCCCCCEEEEEeeceeC-cEEec
Q 021917 219 DSRKLEDGDIVNIDVTVYYK-GVHGD 243 (305)
Q Consensus 219 ~~r~L~~GDiV~iDv~~~~~-GY~~D 243 (305)
++.+|++|.++.|+.+++.+ |+.-+
T Consensus 351 ~~~~Le~GMVftIEP~i~~G~G~~~e 376 (478)
T 1b6a_A 351 EATRMEEGEVYAIETFGSTGKGVVHD 376 (478)
T ss_dssp CCCBCCTTCEEEEEEEEESSCSCCEE
T ss_pred CCCEeCCCCEEEEeCeeECCCCEEEE
Confidence 35689999999999988743 44433
No 71
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=92.13 E-value=0.58 Score=43.40 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCC----C--ccccCC-C-CCCC
Q 021917 151 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVN----E--VICHGI-P-DSRK 222 (305)
Q Consensus 151 mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n----~--~~~Hg~-p-~~r~ 222 (305)
.++..+++.++++.+.++++||++-.||...+...+.+.|... |...+.=|+. + .+.|+. + +..+
T Consensus 178 ~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~~~~~g~~~-------~~~~~GHGIG~~~he~p~~~~~~~~~~~~~ 250 (337)
T 4fuk_A 178 SVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEACASQYQCSV-------VRTYTGHGVGHLFHTSPTVCHYANNKSLGM 250 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHHHHTTTCEE-------CSSEEEEECSSSSSEEEEECCSCC---CCB
T ss_pred HHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhcCCc-------ccCcccCCCCCccccCCcccccccCCCCCE
Confidence 4456778889999999999999999999999988877765421 1111211111 1 112221 1 2457
Q ss_pred CCCCCEEEEEeeceeCc------------------EEeceeeEEEec
Q 021917 223 LEDGDIVNIDVTVYYKG------------------VHGDLNETYFVG 251 (305)
Q Consensus 223 L~~GDiV~iDv~~~~~G------------------Y~~D~~RT~~vG 251 (305)
|++|.++.|+-+.|..+ +-+.+..|++|-
T Consensus 251 L~~GMV~TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVT 297 (337)
T 4fuk_A 251 MRPGHVFTIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVT 297 (337)
T ss_dssp CCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEC
T ss_pred eCCCCEEEECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEc
Confidence 99999999998888643 344556788884
No 72
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=91.81 E-value=0.78 Score=44.81 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 021917 150 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI 187 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~ 187 (305)
..|+.-.++.+++++++++++||++-.||...+.+.+.
T Consensus 302 ~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~~~i~ 339 (494)
T 2iw2_A 302 DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHL 339 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 45677778889999999999999999999998887664
No 73
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=91.79 E-value=0.88 Score=44.94 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 021917 151 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI 187 (305)
Q Consensus 151 mR~A~~ia~~~l~~~~~~i~pGvTe~EI~~~v~~~~~ 187 (305)
.++...++.++.++++++++||++-.||++.+++.+.
T Consensus 268 ~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i~ 304 (517)
T 3l24_A 268 FAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVA 304 (517)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 4577788999999999999999999999998876653
No 74
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=91.63 E-value=0.32 Score=49.13 Aligned_cols=97 Identities=20% Similarity=0.115 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceee--ecCCCc---cccCCCCCCCC
Q 021917 150 RMRETCRIAREVLDAAARMIRP-GVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC--TSVNEV---ICHGIPDSRKL 223 (305)
Q Consensus 150 ~mR~A~~ia~~~l~~~~~~i~p-GvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~--ts~n~~---~~Hg~p~~r~L 223 (305)
.+|++..++.+++.++.++++| |++-.+|+..+.+.+.+.|.+-. ++..-.|. ..+.+. +.....++.+|
T Consensus 439 ~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~~~----h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L 514 (623)
T 3ctz_A 439 YEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLDYL----HGTGHGVGSFLNVHEGPCGISYKTFSDEPL 514 (623)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHTTCCCS----SCSEEBCCSSSCSSCCSCEECTTCSCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCCCC----CCccccCCCCCCCCCCCccCCCCCCCCCcc
Confidence 3567777888999999999999 99999999999999999886310 11111122 222221 11110145689
Q ss_pred CCCCEEEEEeeceeCc-EEeceeeEEEe
Q 021917 224 EDGDIVNIDVTVYYKG-VHGDLNETYFV 250 (305)
Q Consensus 224 ~~GDiV~iDv~~~~~G-Y~~D~~RT~~v 250 (305)
++|.++.|+.+.|..| |-..+.-|++|
T Consensus 515 ~~GMv~tiEPGiy~~g~~GiRiEd~vlV 542 (623)
T 3ctz_A 515 EAGMIVTDEPGYYEDGAFGIRIENVVLV 542 (623)
T ss_dssp CTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred CCCeEEEEeCcEEECCceEEEEeeEEEE
Confidence 9999999999998765 44455555555
No 75
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=90.38 E-value=0.42 Score=44.93 Aligned_cols=42 Identities=21% Similarity=0.241 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCC
Q 021917 256 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF 297 (305)
Q Consensus 256 e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~ 297 (305)
.++++.+.+.++++.+.+.+|||++-.||.+.+++.+++.|-
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~ 88 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLK 88 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999999988654
No 76
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=76.55 E-value=1.1 Score=32.14 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=10.3
Q ss_pred CCcccChhhhhhc
Q 021917 38 GAAFCTQDCFKAS 50 (305)
Q Consensus 38 ~~~fc~q~cfk~~ 50 (305)
...|||+-|-.-+
T Consensus 27 ~rPFCSeRCr~iD 39 (68)
T 1lv3_A 27 FRPFCSKRCQLID 39 (68)
T ss_dssp CCSSSSHHHHHHH
T ss_pred CCcccCHHHHhhh
Confidence 5679999997655
No 77
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.45 E-value=1.9 Score=30.24 Aligned_cols=47 Identities=28% Similarity=0.555 Sum_probs=28.5
Q ss_pred CCCcccccc--ccccccCCc-cc---cccchhhhcCCCCCCCcccChhhhhhch--hHHHHHh
Q 021917 4 GSDAAETTS--LSCVRCGKP-AH---LQCPKCMELKLPREGAAFCTQDCFKASW--TSHKSVH 58 (305)
Q Consensus 4 ~~~~~~~~~--~~c~~c~~~-~~---l~cp~c~~~~~~~~~~~fc~q~cfk~~w--~~hk~~h 58 (305)
||.+++... ..|.+|++. +. .+|-.|.. |---++||...- ..|+..|
T Consensus 1 ~~s~~~~v~H~~~Cd~C~~~pi~G~RykC~~C~d--------~DLC~~C~~~g~~~~~H~~~H 55 (63)
T 2e5r_A 1 GSSGSSGVFHPVECSYCHSESMMGFRYRCQQCHN--------YQLCQDCFWRGHAGGSHSNQH 55 (63)
T ss_dssp CCCCSSSCCSCSCCSSSCCCSSCSCEEEESSCSS--------CEECHHHHHHCCCCSSSCTTC
T ss_pred CCCCcCCceeCCCCcCCCCcceecceEEecCCCC--------chhHHHHHhCCCcCCCCCCCC
Confidence 455555432 679999974 55 66776654 333578998752 3355544
No 78
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=53.26 E-value=9.3 Score=25.40 Aligned_cols=29 Identities=34% Similarity=0.690 Sum_probs=17.5
Q ss_pred ccccccCCccccccchhhhcCCCCCCCcccChhhhhh
Q 021917 13 LSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKA 49 (305)
Q Consensus 13 ~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~ 49 (305)
+.|.-||++....= .+- ..-|||+.|-++
T Consensus 19 ~~C~~CG~~i~~~~-----~~r---~krFCS~sCR~~ 47 (49)
T 2l8e_A 19 LKCEYCGKYAPAEQ-----FRG---SKRFCSMTCAKR 47 (49)
T ss_dssp EECTTTCCEEEGGG-----CTT---TSSSCSHHHHHH
T ss_pred CcChhccCcccccc-----CCC---CCccCCHHHHhh
Confidence 35777777665211 111 346999999765
No 79
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=51.32 E-value=58 Score=32.64 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCCC
Q 021917 162 LDAAARMIRPGVTTDEIDRVVHEATITAGGYPS 194 (305)
Q Consensus 162 l~~~~~~i~pGvTe~EI~~~v~~~~~~~G~~ps 194 (305)
++.....++||+|..+|...+...+...++.|.
T Consensus 228 l~a~l~~~~~gvt~~~It~~IekvaksY~ck~V 260 (614)
T 4b6a_t 228 LPASLGGTSSGITGQLIRTIVDTIARSYNCGVV 260 (614)
T ss_dssp --------STTCBHHHHHHHHHHHHHTTTCEEC
T ss_pred hhhhhhccCCCcchHHHHHHHHHHHhcCCcEEe
Confidence 344455679999999999999999999888664
No 80
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=51.03 E-value=4.3 Score=27.76 Aligned_cols=20 Identities=20% Similarity=0.635 Sum_probs=14.9
Q ss_pred hcCCCCCCCcccChhhhhhc
Q 021917 31 ELKLPREGAAFCTQDCFKAS 50 (305)
Q Consensus 31 ~~~~~~~~~~fc~q~cfk~~ 50 (305)
+..|.+++.||||++|-+..
T Consensus 20 ~eai~~dGK~YCSe~Ca~gH 39 (55)
T 1jjd_A 20 SKAIDRNGLYYCSEACADGH 39 (55)
T ss_dssp TTSEESSSCEESSHHHHHTS
T ss_pred HHhhhcCCeEEehHHHHccC
Confidence 34444668999999998764
No 81
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=48.90 E-value=5.3 Score=25.75 Aligned_cols=15 Identities=40% Similarity=0.846 Sum_probs=12.0
Q ss_pred ccccccccCCccccc
Q 021917 11 TSLSCVRCGKPAHLQ 25 (305)
Q Consensus 11 ~~~~c~~c~~~~~l~ 25 (305)
..|.|.+||||..|.
T Consensus 16 ~YRvC~~CgkPi~ls 30 (44)
T 2lo3_A 16 QYRVCEKCGKPLALT 30 (44)
T ss_dssp CEEECTTTCCEEETT
T ss_pred cchhhcccCCcchHH
Confidence 458999999998753
No 82
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=45.79 E-value=10 Score=26.72 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=6.8
Q ss_pred ccccccCCccc
Q 021917 13 LSCVRCGKPAH 23 (305)
Q Consensus 13 ~~c~~c~~~~~ 23 (305)
..|..|++...
T Consensus 16 ~rC~~C~kkvg 26 (64)
T 1wfh_A 16 NRCTVCRKRVG 26 (64)
T ss_dssp CCCTTTCCCCC
T ss_pred CcChhhCCccC
Confidence 55777776543
No 83
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.20 E-value=11 Score=27.04 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=15.4
Q ss_pred CCCCcccccc-----ccccccCCccc
Q 021917 3 GGSDAAETTS-----LSCVRCGKPAH 23 (305)
Q Consensus 3 ~~~~~~~~~~-----~~c~~c~~~~~ 23 (305)
|.|++.+.+. ..|.+|++++.
T Consensus 1 ~~~g~~~~~~~~~~~~~C~~C~~~I~ 26 (80)
T 2dj7_A 1 GSSGSSGKPIKIRGPSHCAGCKEEIK 26 (80)
T ss_dssp CCCCCCCCCCCCSSCSCCTTTCCCCS
T ss_pred CCCCcCCCCcCCCCCCCCcCcCCeeC
Confidence 5677777753 46999999764
No 84
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.23 E-value=15 Score=25.66 Aligned_cols=20 Identities=25% Similarity=0.562 Sum_probs=15.0
Q ss_pred CCCccccccccccccCCccc
Q 021917 4 GSDAAETTSLSCVRCGKPAH 23 (305)
Q Consensus 4 ~~~~~~~~~~~c~~c~~~~~ 23 (305)
||.+-.....+|.+|++++.
T Consensus 1 gs~~~~~~~~~C~~C~~~I~ 20 (76)
T 2cu8_A 1 GSSGSSGMASKCPKCDKTVY 20 (76)
T ss_dssp CCCSCCCCCCBCTTTCCBCC
T ss_pred CccccCCCCCCCcCCCCEeE
Confidence 56666666778999999765
No 85
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=43.54 E-value=6 Score=25.65 Aligned_cols=11 Identities=27% Similarity=0.878 Sum_probs=9.2
Q ss_pred cccChhhhhhc
Q 021917 40 AFCTQDCFKAS 50 (305)
Q Consensus 40 ~fc~q~cfk~~ 50 (305)
.|||-.|-++.
T Consensus 27 RFCS~~Carry 37 (43)
T 2w0t_A 27 RFCSVSCSRSY 37 (43)
T ss_dssp SSSSHHHHHHH
T ss_pred ceechhhhCcc
Confidence 49999998875
No 86
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=43.32 E-value=18 Score=34.48 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=31.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcE
Q 021917 174 TTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240 (305)
Q Consensus 174 Te~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY 240 (305)
|+.+|+..+.....+++-+ .+-+++++.||.|.||+.+..+|-
T Consensus 130 tde~Vd~~l~~l~~~~a~~------------------------~~ve~~a~~gD~V~id~~~~~dG~ 172 (433)
T 3gty_X 130 LEKYVERRIEDLRESHALL------------------------EPKEGPAEAGDLVRVNMEVYNEEG 172 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCE------------------------EECCSCCCTTSEEEEEEEEECTTS
T ss_pred CHHHHHHHHHHHHHhcCee------------------------eccccccCCCCEEEEEEEEEECCE
Confidence 7888888888666555422 123568899999999999877763
No 87
>3mhs_E SAGA-associated factor 73; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_E 4fip_D 4fjc_D 4fk5_E 3m99_D
Probab=43.05 E-value=8.8 Score=29.12 Aligned_cols=21 Identities=33% Similarity=0.610 Sum_probs=15.3
Q ss_pred CCCccccccccccccCCccccc
Q 021917 4 GSDAAETTSLSCVRCGKPAHLQ 25 (305)
Q Consensus 4 ~~~~~~~~~~~c~~c~~~~~l~ 25 (305)
..|+. ...|+|.+||+|..|.
T Consensus 68 ~Ld~~-~~YRvCn~CGkPI~l~ 88 (96)
T 3mhs_E 68 PLDKP-IQYRVCEKCGKPLALT 88 (96)
T ss_dssp TTSSS-CCCEEETTTCCEECGG
T ss_pred cCCCc-ccchhhhccCCceeHH
Confidence 34444 5669999999998753
No 88
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=42.51 E-value=12 Score=26.55 Aligned_cols=29 Identities=31% Similarity=0.933 Sum_probs=21.9
Q ss_pred cccccCCccccccchhhhcCCCCCCCcccChhhhhhc
Q 021917 14 SCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKAS 50 (305)
Q Consensus 14 ~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~ 50 (305)
-|.-|...|+|+|..|-. --||. -||+..
T Consensus 10 WC~ICneDAtlrC~gCdg-------DLYC~-rC~rE~ 38 (67)
T 2d8v_A 10 WCCICNEDATLRCAGCDG-------DLYCA-RCFREG 38 (67)
T ss_dssp SCTTTCSCCCEEETTTTS-------EEECS-SHHHHH
T ss_pred eeEEeCCCCeEEecCCCC-------ceehH-HHHHHH
Confidence 377799999999999963 23886 487753
No 89
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=41.76 E-value=32 Score=27.02 Aligned_cols=51 Identities=16% Similarity=0.256 Sum_probs=36.6
Q ss_pred CCCCCCCCEEEEEeecee-CcEEecee------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021917 220 SRKLEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (305)
Q Consensus 220 ~r~L~~GDiV~iDv~~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~ 279 (305)
.+.++.||.|.|+...+. +|---|-+ .+|.+|.- .+...++.++..+++|-
T Consensus 40 G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g---------~vi~G~eeaL~gmk~Ge 97 (133)
T 2y78_A 40 GAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGG---------MVIKGWDEGVQGMKVGG 97 (133)
T ss_dssp SCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSS---------SSCHHHHHHSTTCBTTC
T ss_pred CCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCC---------ChhHHHHHHHcCCCCCC
Confidence 457899999999999886 77655554 36777731 12346777888888885
No 90
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=40.71 E-value=21 Score=27.42 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=35.0
Q ss_pred CCCCCCCCEEEEEeeceeCcEEecee----eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021917 220 SRKLEDGDIVNIDVTVYYKGVHGDLN----ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (305)
Q Consensus 220 ~r~L~~GDiV~iDv~~~~~GY~~D~~----RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~ 279 (305)
+++++.||.|.||..++.+|---|-+ .+|.+|.- .+...++.++.-+++|-
T Consensus 27 ~~~~~~gD~V~v~Y~g~~dG~~fdss~~~p~~f~lG~g---------~vi~G~ee~L~Gmk~Ge 81 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIVDNKKLASASAQNYELTIGSN---------SFIKGFETGLIAMKVNQ 81 (113)
T ss_dssp --CCCSSEEEEEEEEEEETTEECSTTCCSEEEEEETSS---------CSCTTHHHHHHTSCSSE
T ss_pred CCCCCCCCEEEEEEEEEECCEEcccCCccCEEEEECCC---------ChhHHHHHHHCCCCCCC
Confidence 57899999999999988888766654 46777631 12235667777777773
No 91
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=39.02 E-value=17 Score=28.22 Aligned_cols=52 Identities=10% Similarity=0.091 Sum_probs=37.6
Q ss_pred CCCCCCCCEEEEEeecee--CcEEeceee------EEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 220 SRKLEDGDIVNIDVTVYY--KGVHGDLNE------TYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 220 ~r~L~~GDiV~iDv~~~~--~GY~~D~~R------T~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
.+..+.||.|.|+...+. +|-.-|-++ +|.+|.- .+...++.++.-+++|-+
T Consensus 31 g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g---------~~i~g~e~~l~gm~~Ge~ 90 (129)
T 2vn1_A 31 ENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQG---------EVIKGWDICVSSMRKNEK 90 (129)
T ss_dssp GGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSS---------SSCHHHHHHHTTCCTTCE
T ss_pred CCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCC---------CcCHHHHHHHhCCCCCCE
Confidence 467889999999999887 776555543 6777731 134577888888888853
No 92
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=37.63 E-value=31 Score=26.44 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=38.8
Q ss_pred CCCCCCCCCEEEEEeecee--CcEEecee--------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 219 DSRKLEDGDIVNIDVTVYY--KGVHGDLN--------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 219 ~~r~L~~GDiV~iDv~~~~--~GY~~D~~--------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
..+.++.||.|.|+...+. +|---|.+ .+|.+|.- .+...++.++..+++|-+
T Consensus 25 ~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~---------~~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 25 CHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGIL---------EALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp CSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSC---------SSCHHHHHHSTTCCTTCE
T ss_pred CCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCC---------ChhHHHHHHHhCCCCCCE
Confidence 3578899999999999986 78766655 36777631 134577888888888853
No 93
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=36.99 E-value=20 Score=26.47 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEeecee-CcEEecee------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 221 RKLEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 221 r~L~~GDiV~iDv~~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
+.++.||.|.|+...+. +|-.-|-+ .+|.+|.- .+...++.++.-+++|-+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~~~~l~gm~~Ge~ 61 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTG---------QVIKGWDQGLLGMCEGEK 61 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSS---------SSCHHHHTTSTTCCTTCE
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCC---------CccHHHHHHHhCCCCCCE
Confidence 46789999999999886 77555543 35777631 134467777778888753
No 94
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=35.87 E-value=15 Score=25.78 Aligned_cols=21 Identities=24% Similarity=0.754 Sum_probs=15.2
Q ss_pred ccccccccCCccc------cccchhhh
Q 021917 11 TSLSCVRCGKPAH------LQCPKCME 31 (305)
Q Consensus 11 ~~~~c~~c~~~~~------l~cp~c~~ 31 (305)
..-.|..||.+.. ++||.|--
T Consensus 20 v~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred eEEECCCCCCeeecCCCCceECCCCCc
Confidence 3457999998665 77887753
No 95
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=34.97 E-value=41 Score=31.97 Aligned_cols=45 Identities=22% Similarity=0.265 Sum_probs=30.2
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcE
Q 021917 172 GVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 240 (305)
Q Consensus 172 GvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY 240 (305)
-+|+.+|+..+.....+++-+ .+.+++++.||.|.||+.++.+|=
T Consensus 131 eVtde~Vd~~l~~l~~~~a~~------------------------~~~~~~~~~gD~V~i~y~g~~dG~ 175 (432)
T 1w26_A 131 EVTDADVDGMLDTLRKQQATW------------------------KEKDGAVEAEDRVTIDFTGSVDGE 175 (432)
T ss_dssp CCCHHHHHHHHHHHHHHTCEE------------------------CCCSSCCCTTCEEEECEEEESSSC
T ss_pred CcCHHHHHHHHHHHHHhCCee------------------------eecCCCCCCCCEEEEEEEEeeCCe
Confidence 357888888877655554321 123567889999999988776553
No 96
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=33.96 E-value=20 Score=21.39 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=17.6
Q ss_pred eeEEEecCCCHHHHHHHHHHHHH
Q 021917 245 NETYFVGNADEASRQLVQCTYEC 267 (305)
Q Consensus 245 ~RT~~vG~~~~e~~~l~~~~~ea 267 (305)
-||+.||--++|.++|-+.+..+
T Consensus 5 vrtiwvggtpeelkklkeeakka 27 (36)
T 2ki0_A 5 VRTIWVGGTPEELKKLKEEAKKA 27 (36)
T ss_dssp CCCCCBCCCHHHHHHHHHHHHHH
T ss_pred eEEEEecCCHHHHHHHHHHHHhc
Confidence 48999998788888887765543
No 97
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=31.25 E-value=24 Score=23.79 Aligned_cols=12 Identities=42% Similarity=1.054 Sum_probs=8.8
Q ss_pred CCcccChhhhhh
Q 021917 38 GAAFCTQDCFKA 49 (305)
Q Consensus 38 ~~~fc~q~cfk~ 49 (305)
+..||..+|++.
T Consensus 52 g~~yC~~~C~~k 63 (65)
T 2iyb_E 52 GMVFCSVECKKR 63 (65)
T ss_dssp TEEESSHHHHHT
T ss_pred CEEecCHHHhhh
Confidence 456788888864
No 98
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=30.10 E-value=76 Score=25.79 Aligned_cols=49 Identities=27% Similarity=0.354 Sum_probs=36.7
Q ss_pred CCCCCEEEEEeeceeCcEEecee-------------------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 223 LEDGDIVNIDVTVYYKGVHGDLN-------------------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 223 L~~GDiV~iDv~~~~~GY~~D~~-------------------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
+++||.|.|+..++.+|---|.+ .+|.+|.- .+...+++++.-+++|-+
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g---------~vi~G~eeaL~gm~~Ge~ 69 (157)
T 3pr9_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEG---------QVLPGLDEAILEMDVGEE 69 (157)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSS---------SSCHHHHHHHHHCCTTCE
T ss_pred CCCCCEEEEEEEEEECCEEEEeccccccccccccccccCCCCEEEEECCC---------cHHHHHHHHHcCCCCCCE
Confidence 68899999999999898777765 35677731 134578888888998853
No 99
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.53 E-value=16 Score=24.15 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=14.6
Q ss_pred CCcccChhhhhh-----chhHHHHHhh
Q 021917 38 GAAFCTQDCFKA-----SWTSHKSVHL 59 (305)
Q Consensus 38 ~~~fc~q~cfk~-----~w~~hk~~h~ 59 (305)
..|-|++.|-|. +...|+++|-
T Consensus 35 ~p~~C~~~C~k~f~~~~~L~~H~~~hc 61 (66)
T 2eod_A 35 LPVACPNQCGVGTVAREDLPGHLKDSC 61 (66)
T ss_dssp SEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred cCccCCcccCcccccHHHHHHHHHhhc
Confidence 567787677443 5677877774
No 100
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=28.31 E-value=1.1e+02 Score=22.43 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=35.1
Q ss_pred CCCCCEEEEEeecee-CcEEecee------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 223 LEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 223 L~~GDiV~iDv~~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
.+.||.|.|+...+. +|---|-+ .+|.+|.- .+...++.++.-+++|-+
T Consensus 16 ~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~~~~l~gm~~Ge~ 71 (107)
T 2ppn_A 16 PKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQ---------EVIRGWEEGVAQMSVGQR 71 (107)
T ss_dssp CCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSC---------CSCHHHHHHHTTCCTTCE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCC---------ChHHHHHHHHhCCCCCCE
Confidence 789999999999886 77655544 35777731 124577888888888854
No 101
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=27.06 E-value=76 Score=23.62 Aligned_cols=49 Identities=20% Similarity=0.203 Sum_probs=34.9
Q ss_pred CCCCCEEEEEeecee-CcEEecee------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 223 LEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 223 L~~GDiV~iDv~~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
++.||.|.|+...+. +|-.-|-+ .+|.+|.- .+...++.++.-+++|-+
T Consensus 22 ~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~---------~~i~g~e~~l~gm~~Ge~ 77 (113)
T 1yat_A 22 PKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVG---------QVIKGWDVGIPKLSVGEK 77 (113)
T ss_dssp CCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSS---------SSCHHHHHHGGGCCTTCE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCC---------CccHHHHHHHhCCCCCCE
Confidence 789999999999886 77555544 35677631 124577888888888854
No 102
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=26.50 E-value=17 Score=25.08 Aligned_cols=20 Identities=20% Similarity=0.549 Sum_probs=15.5
Q ss_pred cccccccCCccc----cccchhhh
Q 021917 12 SLSCVRCGKPAH----LQCPKCME 31 (305)
Q Consensus 12 ~~~c~~c~~~~~----l~cp~c~~ 31 (305)
++.|-+|.++.+ .+||.|.+
T Consensus 15 ~~~C~~C~~~~~~~~~y~C~~C~~ 38 (59)
T 1z60_A 15 ERFCYGCQGELKDQHVYVCAVCQN 38 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTC
T ss_pred CCcccccCcccCCCccEECCccCc
Confidence 467999998653 78999974
No 103
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=26.44 E-value=32 Score=32.32 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=33.4
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEEEeeceeCcEEece----eeEE
Q 021917 173 VTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDL----NETY 248 (305)
Q Consensus 173 vTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~iDv~~~~~GY~~D~----~RT~ 248 (305)
+|+.+|+..+.....+++-+ + +.+++++.||.|.||+.+..+|=.-|- ..+|
T Consensus 135 Vtde~Vd~~l~~l~~~~a~~------------~------------~~~~~~~~gD~V~i~y~g~~dG~~fd~~~~~~~~~ 190 (392)
T 1t11_A 135 VTDADVAEMLETLRKQQATW------------K------------EVDEAAENGKRVSIDFVGSIDGVEFEGGKAENFPL 190 (392)
T ss_dssp --CTHHHHHHHHHHHHHCEE------------E------------ECSCCCCTTCEEEEEEEEESSSSCCTTCEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhcCee------------e------------ecCCCCCCCCEEEEEEEEEECCEEccCCCccceEE
Confidence 47777877777555554311 1 235678999999999988766533332 3455
Q ss_pred Eec
Q 021917 249 FVG 251 (305)
Q Consensus 249 ~vG 251 (305)
.+|
T Consensus 191 ~lG 193 (392)
T 1t11_A 191 EMG 193 (392)
T ss_dssp ETT
T ss_pred Eec
Confidence 555
No 104
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=26.14 E-value=25 Score=20.58 Aligned_cols=14 Identities=36% Similarity=0.672 Sum_probs=9.0
Q ss_pred cccccccccCCccc
Q 021917 10 TTSLSCVRCGKPAH 23 (305)
Q Consensus 10 ~~~~~c~~c~~~~~ 23 (305)
|++.+|..|+|..-
T Consensus 1 ~m~~~C~~C~k~Vy 14 (31)
T 1zfo_A 1 XMNPNCARCGKIVY 14 (31)
T ss_dssp -CCCBCSSSCSBCC
T ss_pred CCCCcCCccCCEEe
Confidence 35567888888654
No 105
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=25.39 E-value=34 Score=23.98 Aligned_cols=17 Identities=35% Similarity=0.932 Sum_probs=10.6
Q ss_pred ccccccCCccc---cccchhh
Q 021917 13 LSCVRCGKPAH---LQCPKCM 30 (305)
Q Consensus 13 ~~c~~c~~~~~---l~cp~c~ 30 (305)
..|..|++... .+| .|.
T Consensus 16 ~rC~~C~kkvgl~~f~C-rCg 35 (64)
T 1wg2_A 16 NRCFSCNKKVGVMGFKC-KCG 35 (64)
T ss_dssp CSCTTTCCCCTTSCEEC-TTS
T ss_pred CcChhhCCcccccCeEe-ecC
Confidence 56887877544 456 554
No 106
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=25.12 E-value=94 Score=24.05 Aligned_cols=48 Identities=13% Similarity=0.211 Sum_probs=34.3
Q ss_pred CCCCCEEEEEeecee-CcEEecee------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021917 223 LEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (305)
Q Consensus 223 L~~GDiV~iDv~~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~ 279 (305)
++.||.|.|+...+. +|---|-+ .+|.+|.- .+...++.++.-+++|-
T Consensus 40 ~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g---------~vi~G~e~aL~gm~~Ge 94 (130)
T 2lgo_A 40 PQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAG---------EVIKGWDQGVATMTLGE 94 (130)
T ss_dssp CCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTST---------TSCHHHHHHHHHSCTTE
T ss_pred CCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCC---------CccHHHHHHHhCCCCCC
Confidence 789999999999886 77555543 35677631 13457788888888884
No 107
>3noj_A 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloac decarboxylase; class II aldolase, A-B-B-A sandwich, metalloprotein, lyase; HET: PG4; 1.82A {Pseudomonas putida}
Probab=24.89 E-value=63 Score=28.28 Aligned_cols=68 Identities=16% Similarity=0.049 Sum_probs=44.8
Q ss_pred CCCCCCEEEEEeeceeCcEEeceeeEEEecC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhcCCcee
Q 021917 222 KLEDGDIVNIDVTVYYKGVHGDLNETYFVGN-ADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVE 300 (305)
Q Consensus 222 ~L~~GDiV~iDv~~~~~GY~~D~~RT~~vG~-~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~eI~~ai~~~~~~~G~~vv 300 (305)
.+.+||+|.- |-.-.+++.. .-++..+..+...+.-+..++.++-|.+..|++. +++.+++.|+..+
T Consensus 163 ~V~PGD~V~a-----------D~dGVvviP~~~a~eV~~~a~~~~~~E~~~~~~i~~G~~~~~~~~-~~~~l~~~g~~~~ 230 (238)
T 3noj_A 163 LINPGDIVVA-----------DDDGVVVVRRDECESTLVAAAERAGLEEEKRLRLAAGELGLDIYK-MRERLEAKGLRYV 230 (238)
T ss_dssp EECTTCEEEE-----------ETTEEEEECGGGHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTT-CHHHHHHHTCCCC
T ss_pred EECCCCEEEE-----------cCCeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHCcCChhhccc-hHHHHHHcCCEee
Confidence 4566666654 5555566632 2234444444455555667788999999999876 5788999998765
Q ss_pred e
Q 021917 301 I 301 (305)
Q Consensus 301 ~ 301 (305)
.
T Consensus 231 ~ 231 (238)
T 3noj_A 231 D 231 (238)
T ss_dssp S
T ss_pred c
Confidence 4
No 108
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=24.08 E-value=16 Score=20.94 Aligned_cols=9 Identities=44% Similarity=1.364 Sum_probs=7.2
Q ss_pred cccchhhhc
Q 021917 24 LQCPKCMEL 32 (305)
Q Consensus 24 l~cp~c~~~ 32 (305)
.|||.|.+.
T Consensus 7 vqcpvcqq~ 15 (29)
T 3vhs_A 7 VQCPVCQQM 15 (29)
T ss_dssp EECTTTCCE
T ss_pred eeChHHHHh
Confidence 789998764
No 109
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.10 E-value=38 Score=22.42 Aligned_cols=27 Identities=30% Similarity=0.635 Sum_probs=17.0
Q ss_pred CCCccccccccccccCCccc-cccchhh
Q 021917 4 GSDAAETTSLSCVRCGKPAH-LQCPKCM 30 (305)
Q Consensus 4 ~~~~~~~~~~~c~~c~~~~~-l~cp~c~ 30 (305)
||+.+......|..|++... |.|-.|-
T Consensus 1 ~s~g~~~~~~~C~vC~~~g~ll~Cd~C~ 28 (56)
T 2yql_A 1 GSSGSSGHEDFCSVCRKSGQLLMCDTCS 28 (56)
T ss_dssp CCCCCCSSCCSCSSSCCSSCCEECSSSS
T ss_pred CCCCcCCCCCCCccCCCCCeEEEcCCCC
Confidence 56666666677888887654 4454443
No 110
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=23.09 E-value=84 Score=22.49 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=31.7
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccCCCCCCCCCCCCEEEE
Q 021917 169 IRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI 231 (305)
Q Consensus 169 i~pGvTe~EI~~~v~~~~~~~G~~psplny~~fp~~v~ts~n~~~~Hg~p~~r~L~~GDiV~i 231 (305)
+..|.|-.|++..++..+.++ .+...+|... .+-+++|++||.|-|
T Consensus 20 lp~GaT~~D~A~~Ih~~lg~~--------------~v~AkVNG~~---v~L~~~L~~gd~VeI 65 (78)
T 3hvz_A 20 LPIGSTVIDFAYAIHSAVGNR--------------MIGAKVDGRI---VPIDYKVKTGEIIDV 65 (78)
T ss_dssp EETTCBHHHHHHHHCHHHHHT--------------EEEEEETTEE---ECTTCBCCTTCBEEE
T ss_pred ecCCCCHHHHHHHhhhhhhcc--------------eEEEEECCEE---cCCCcccCCCCEEEE
Confidence 456899999998888777653 1333334322 244678999999988
No 111
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=22.81 E-value=1e+02 Score=23.11 Aligned_cols=50 Identities=22% Similarity=0.202 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEeecee-CcEEecee-------------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 222 KLEDGDIVNIDVTVYY-KGVHGDLN-------------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 222 ~L~~GDiV~iDv~~~~-~GY~~D~~-------------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
..+.||.|.|+...+. +|---|-+ .+|.+|.- .+...++.++..+++|-+
T Consensus 19 ~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~---------~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 19 FPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVG---------KVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp CCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSS---------SSCHHHHHHHTTCCTTCE
T ss_pred cCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCC---------ChhHHHHHHHhCCCCCCE
Confidence 4688999999999886 88666654 24566631 134578888888888853
No 112
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=22.75 E-value=95 Score=24.84 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=36.5
Q ss_pred CCCCCCCCEEEEEeecee--CcEEeceee-----EEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021917 220 SRKLEDGDIVNIDVTVYY--KGVHGDLNE-----TYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (305)
Q Consensus 220 ~r~L~~GDiV~iDv~~~~--~GY~~D~~R-----T~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~ 279 (305)
.++++.||.|.|+...+. +|-.-|.++ +|.+|.- .+...++.++.-+++|-
T Consensus 4 ~~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g---------~vipg~e~aL~gm~~Ge 61 (151)
T 2kr7_A 4 HDLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTN---------QIIAGLEKAVLKAQIGE 61 (151)
T ss_dssp CCCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCC---------CSCHHHHHHHTTCCBTC
T ss_pred ccCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCC---------CccHHHHHHHcCCCCCC
Confidence 356899999999999887 786666653 6777631 12346777888888884
No 113
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.73 E-value=34 Score=20.87 Aligned_cols=13 Identities=31% Similarity=0.434 Sum_probs=9.3
Q ss_pred hhchhHHHHHhhh
Q 021917 48 KASWTSHKSVHLK 60 (305)
Q Consensus 48 k~~w~~hk~~h~~ 60 (305)
+.+...|+++|..
T Consensus 33 ~~~L~~H~~~H~~ 45 (47)
T 1ncs_A 33 RYNIRSHIQTHLE 45 (47)
T ss_dssp SSSHHHHHHHHTT
T ss_pred HHHHHHHHHHccC
Confidence 3566889988853
No 114
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=22.69 E-value=7.2 Score=28.67 Aligned_cols=42 Identities=24% Similarity=0.517 Sum_probs=27.6
Q ss_pred ccccccCC-ccc---cccchhhhcCCCCCCCcccChhhhhhch--hHHHHHhh
Q 021917 13 LSCVRCGK-PAH---LQCPKCMELKLPREGAAFCTQDCFKASW--TSHKSVHL 59 (305)
Q Consensus 13 ~~c~~c~~-~~~---l~cp~c~~~~~~~~~~~fc~q~cfk~~w--~~hk~~h~ 59 (305)
..|.+|++ ++. .+|-.|.. . .+|---+.||.... ..|+..|.
T Consensus 22 ~~Cd~C~~~pI~G~RykC~~C~d-~----~~yDLC~~C~~~g~~~~~H~~~H~ 69 (82)
T 2fc7_A 22 FKCDNCGIEPIQGVRWHCQDCPP-E----MSLDFCDSCSDCLHETDIHKEDHQ 69 (82)
T ss_dssp CCCSSSCCSSEESCEEEESSSCS-S----SCCEEEGGGTTCCCCCSSCCSSSC
T ss_pred CCCCCCCCCcceeceEECCcCCC-C----cceecHHHHHhCccccCCCCCCCC
Confidence 35999997 554 77887765 1 23545578998743 56766664
No 115
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.63 E-value=33 Score=18.45 Aligned_cols=11 Identities=27% Similarity=0.332 Sum_probs=7.8
Q ss_pred hchhHHHHHhh
Q 021917 49 ASWTSHKSVHL 59 (305)
Q Consensus 49 ~~w~~hk~~h~ 59 (305)
.+...|+++|.
T Consensus 19 ~~L~~H~~~H~ 29 (32)
T 1zfd_A 19 HDLIRHKKSHQ 29 (32)
T ss_dssp HHHHHHHGGGT
T ss_pred HHHHHHHHHcc
Confidence 45678888885
No 116
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=22.21 E-value=46 Score=24.49 Aligned_cols=26 Identities=35% Similarity=0.770 Sum_probs=16.9
Q ss_pred CCCCCcccccc--ccccccCC--ccc--cccc
Q 021917 2 AGGSDAAETTS--LSCVRCGK--PAH--LQCP 27 (305)
Q Consensus 2 ~~~~~~~~~~~--~~c~~c~~--~~~--l~cp 27 (305)
.|+||++.++. ..|.-|.+ +.+ .|||
T Consensus 3 ~gss~~~~~~~a~l~CtlC~erLEdtHFVQCP 34 (93)
T 2cs3_A 3 SGSSGSPMANSGPLCCTICHERLEDTHFVQCP 34 (93)
T ss_dssp CSSSSCSSCSCCSCCCSSSCSCCSSTTSEECS
T ss_pred CCCCCCCCCCCCeeEeecchhhhccCceeeCC
Confidence 47778777755 33544876 334 8999
No 117
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.04 E-value=53 Score=22.52 Aligned_cols=35 Identities=26% Similarity=0.622 Sum_probs=22.3
Q ss_pred cccccccccccCCccccccchhhhcCCCCCCCcccChhhhhhc
Q 021917 8 AETTSLSCVRCGKPAHLQCPKCMELKLPREGAAFCTQDCFKAS 50 (305)
Q Consensus 8 ~~~~~~~c~~c~~~~~l~cp~c~~~~~~~~~~~fc~q~cfk~~ 50 (305)
|.+....|.-||+-..--|- ..+.--||.||-...
T Consensus 15 p~pgePvCvvCGryGeYICd--------~Td~DVCSlECK~~~ 49 (60)
T 2yqp_A 15 AEPGEPICVVCGRYGEYICD--------KTDEDVCSLECKAKH 49 (60)
T ss_dssp CCTTSCCCSSSSSCCSEECS--------SSCCEESSHHHHHHH
T ss_pred CCCCCceEEEecCccceeec--------CCCcchhhHHHHHHH
Confidence 33445667777776665554 335668999996554
No 118
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=22.03 E-value=41 Score=19.06 Aligned_cols=13 Identities=15% Similarity=0.153 Sum_probs=8.8
Q ss_pred hhchhHHHHHhhh
Q 021917 48 KASWTSHKSVHLK 60 (305)
Q Consensus 48 k~~w~~hk~~h~~ 60 (305)
+.+...|+++|..
T Consensus 23 ~~~L~~H~~~H~~ 35 (37)
T 1va1_A 23 TSHLRAHLRWHTG 35 (37)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCC
Confidence 3456788888853
No 119
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=20.90 E-value=37 Score=17.46 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=8.2
Q ss_pred hhchhHHHHHhh
Q 021917 48 KASWTSHKSVHL 59 (305)
Q Consensus 48 k~~w~~hk~~h~ 59 (305)
+.+...|+.+|.
T Consensus 15 ~~~l~~H~~~h~ 26 (29)
T 1ard_A 15 QEHLKRHYRSHT 26 (29)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 345677888884
No 120
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.87 E-value=27 Score=19.69 Aligned_cols=12 Identities=17% Similarity=0.099 Sum_probs=8.8
Q ss_pred hchhHHHHHhhh
Q 021917 49 ASWTSHKSVHLK 60 (305)
Q Consensus 49 ~~w~~hk~~h~~ 60 (305)
.+...|+.+|..
T Consensus 24 ~~L~~H~~~H~~ 35 (37)
T 2elp_A 24 SDLQRHIWAHEG 35 (37)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhcCC
Confidence 456888888853
No 121
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=20.86 E-value=1.1e+02 Score=24.88 Aligned_cols=48 Identities=23% Similarity=0.259 Sum_probs=35.7
Q ss_pred CCCCCEEEEEeeceeCcEEecee-eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021917 223 LEDGDIVNIDVTVYYKGVHGDLN-ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 279 (305)
Q Consensus 223 L~~GDiV~iDv~~~~~GY~~D~~-RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~ 279 (305)
+++||.|.|+...+.+|---|.+ .+|.+|.- .+...++.++.-+++|-
T Consensus 3 i~~gd~V~v~Y~g~~dG~~fdss~~~f~~G~g---------~vipG~e~aL~Gm~~Ge 51 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQVEGEVLDQGELSYLHGHR---------NLIPGLEEALEGREEGE 51 (158)
T ss_dssp CCTTEEEEEEEEEEETTEEEEEEEEEEETTSS---------SSCHHHHHHHTTCBTTC
T ss_pred CCCCCEEEEEEEEEECCEEEEeeEEEEEECCC---------CcChHHHHHHcCCCCCC
Confidence 67899999999988888777766 57777731 12346777888888885
No 122
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=20.84 E-value=1.7e+02 Score=22.25 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEeecee-CcEEecee------eEEEecCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 021917 222 KLEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGVR 280 (305)
Q Consensus 222 ~L~~GDiV~iDv~~~~-~GY~~D~~------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~ 280 (305)
..+.||.|.|+...+. +|---|-+ .+|.+|.- .+...++.++..+++|-+
T Consensus 34 ~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g---------~~i~G~e~~l~gm~~Ge~ 90 (128)
T 3o5q_A 34 TPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKG---------QVIKAWDIGVATMKKGEI 90 (128)
T ss_dssp CCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSS---------SSCHHHHHHHTTCCTTCE
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCC---------CccHHHHHHHhcCCCCCE
Confidence 4688999999999886 88665654 46777731 124577888888888854
No 123
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.58 E-value=37 Score=18.74 Aligned_cols=12 Identities=42% Similarity=0.567 Sum_probs=8.6
Q ss_pred hhchhHHHHHhh
Q 021917 48 KASWTSHKSVHL 59 (305)
Q Consensus 48 k~~w~~hk~~h~ 59 (305)
+.+...|+++|.
T Consensus 22 ~~~l~~H~~~H~ 33 (36)
T 2elr_A 22 KGTLKSHKLLHT 33 (36)
T ss_dssp HHHHHHHHHHHS
T ss_pred hHHHHHHHHHhc
Confidence 356678888885
No 124
>2h2m_A Protein MURR1, COMM domain-containing protein 1; all alpha-helical, metal transport; NMR {Homo sapiens}
Probab=20.54 E-value=15 Score=28.46 Aligned_cols=18 Identities=28% Similarity=0.540 Sum_probs=13.7
Q ss_pred ccCh-hhhhhchhHHHH-Hh
Q 021917 41 FCTQ-DCFKASWTSHKS-VH 58 (305)
Q Consensus 41 fc~q-~cfk~~w~~hk~-~h 58 (305)
-+.| .||.+.|+.||. +|
T Consensus 87 s~eQa~~~~KFWK~~k~KIr 106 (108)
T 2h2m_A 87 TSDQAAVISKFWKSHKTKIR 106 (108)
T ss_dssp CHHHHHHHTTTTTTTSSSSS
T ss_pred CHHHHHHHHHHHHhchhhhc
Confidence 3443 789999999985 55
No 125
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=20.37 E-value=75 Score=22.32 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=21.4
Q ss_pred eeeecCCCcc-ccCCCCCCCCCCCCEEEEEeece
Q 021917 204 SCCTSVNEVI-CHGIPDSRKLEDGDIVNIDVTVY 236 (305)
Q Consensus 204 ~v~ts~n~~~-~Hg~p~~r~L~~GDiV~iDv~~~ 236 (305)
.++.-.|..+ +-..+.++.|++||.|-| +.+.
T Consensus 30 ~vAV~vNg~iVpr~~~~~~~L~dGD~veI-v~~V 62 (73)
T 2kl0_A 30 HFAVALNYDVVPRGKWDETPVTAGDEIEI-LTPR 62 (73)
T ss_dssp SCEEEESSSEECHHHHTTCBCCTTCEEEE-ECCC
T ss_pred cEEEEECCEECChHHcCcccCCCCCEEEE-Eccc
Confidence 3566677554 333456789999999987 4443
No 126
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=20.36 E-value=31 Score=23.84 Aligned_cols=22 Identities=32% Similarity=0.739 Sum_probs=15.8
Q ss_pred ccccccCCccc-cccchhhhcCC
Q 021917 13 LSCVRCGKPAH-LQCPKCMELKL 34 (305)
Q Consensus 13 ~~c~~c~~~~~-l~cp~c~~~~~ 34 (305)
+.|..||.-+- .+||.|-..-.
T Consensus 6 r~C~~Cg~YTLk~~CP~CG~~t~ 28 (60)
T 2aus_D 6 RKCPKCGRYTLKETCPVCGEKTK 28 (60)
T ss_dssp EECTTTCCEESSSBCTTTCSBCE
T ss_pred eECCCCCCEEccccCcCCCCccC
Confidence 67999987554 67998876543
Done!