BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021923
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 214 bits (546), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 142/218 (65%), Gaps = 10/218 (4%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAIWA 162
Query: 145 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 204
CQ +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 CQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 205 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
NGRLAM + GF++QA TGKGP++NL DHI+DP+ NN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 147/227 (64%), Gaps = 10/227 (4%)
Query: 16 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 75
KA+A+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 76 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 135
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 136 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 195
Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF
Sbjct: 155 -QSILAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAF 206
Query: 196 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/241 (48%), Positives = 144/241 (59%), Gaps = 12/241 (4%)
Query: 5 KKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLS 64
KKAA +K A A+ A E WYG +R +WLGP + P+YLTGE PGDYG+D AGLS
Sbjct: 19 KKAAGTKQTK-AAPAKSAGIE--WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLS 75
Query: 65 KDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLD 124
DP F+KY E++HARWA+LGALG L PE+L EPVW++ G LD
Sbjct: 76 ADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLD 135
Query: 125 YLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFD 184
YLG P L A Q ++ Q +LM E R G A E L PG+ FD
Sbjct: 136 YLGSPALIHA--QNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGES-------FD 186
Query: 185 PLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLL 244
PL L+ DP F ELKVKEIKNGRLAM + GF++QA TGKGP+QNL DH++DP NN
Sbjct: 187 PLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAF 246
Query: 245 S 245
+
Sbjct: 247 A 247
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 211 bits (537), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/226 (50%), Positives = 143/226 (63%), Gaps = 10/226 (4%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 145 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 204
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 AQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 205 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 250
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN + +
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNF 261
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ +
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAVWA 162
Query: 145 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 204
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 163 SQVVLMGLIEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 215
Query: 205 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 211 bits (536), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 147/242 (60%), Gaps = 16/242 (6%)
Query: 4 TKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGL 63
+K + D +A +S+WYG +RP++LGP PSYLTGE PGDYG+D AGL
Sbjct: 24 VRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGL 83
Query: 64 SKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETL 123
S DP F K E++H+RWAMLGALG + PE+L G E VW++ G L
Sbjct: 84 SADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGV-QFGEAVWFKAGAQIFSEGGL 142
Query: 124 DYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCG---IEALEPLGIFLPGDINYPGG 180
DYLG P +L +Q ++ I Q +LM E R G E L+PL YPGG
Sbjct: 143 DYLGNP--NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPL---------YPGG 191
Query: 181 ALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLH 240
A FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DHI+DP+
Sbjct: 192 A-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVA 250
Query: 241 NN 242
NN
Sbjct: 251 NN 252
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 145/227 (63%), Gaps = 10/227 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 101 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 157
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G EPLG + D YPGG+ FDPL L++DP AF EL
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAG----EPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAEL 210
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN S
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWS 257
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 140/217 (64%), Gaps = 10/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I C
Sbjct: 107 LGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWAC 163
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIKN
Sbjct: 164 QVVLMGFVEGYRVGG----GPLGEGL--DPIYPGGA-FDPLGLADDPDAFAELKVKEIKN 216
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 145/229 (63%), Gaps = 10/229 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K + A+ + S WYG R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKGGSQIFSQGGLDYLGNPSLVH 155
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I CQ +LM E R G EPLG + D YPGG+ FDPL L++DP
Sbjct: 156 A--QSILAIWACQVVLMGAVEGYRVAG----EPLGEVV--DPLYPGGS-FDPLGLAEDPE 206
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 145/227 (63%), Gaps = 10/227 (4%)
Query: 16 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 75
K +A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 76 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 135
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 136 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 195
Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF
Sbjct: 155 -QSILAIWACQVILMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAF 206
Query: 196 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 144/227 (63%), Gaps = 10/227 (4%)
Query: 16 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 75
+ +++ A ++++WYG +RP++LGP + PSYL GE GDYG+D AGLS DP F +
Sbjct: 40 RTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 99
Query: 76 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 135
E++HARWAMLGALG L PE+L G E VW++ G LDYLG P L A
Sbjct: 100 LEVIHARWAMLGALGCLTPELLAKSG-VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA- 157
Query: 136 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 195
Q ++ I CQ +LM E R G PLG D YPGG+ FDPL L+ DP F
Sbjct: 158 -QSILAIWACQVVLMGAVEGYRVAG----GPLGEVT--DPIYPGGS-FDPLGLADDPDTF 209
Query: 196 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 210 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 256
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 136/224 (60%), Gaps = 8/224 (3%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
R LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF + E+
Sbjct: 41 GRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEV 100
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PEVL EPVW++ G LDYLG P +L +Q
Sbjct: 101 IHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQS 158
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ + Q LLM E R G++ + G+ YPGG FDPL L+ DPV F EL
Sbjct: 159 ILAVLGFQVLLMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFAEL 212
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
KVKEIKNGRLAM + GF++QA TGKGP++NL DH+ DP+ NN
Sbjct: 213 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
+S+WYGE+RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H RWA
Sbjct: 18 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 78 MLGALGCVFPEILSKNGV-TFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 134
Query: 145 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 204
Q +LM E R G PLG L D YPGGA FDPL L+ DP AF ELKVKEIK
Sbjct: 135 SQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 187
Query: 205 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
NGRLAM + GF++QA TGKGP++NL DHI+DP+ NN
Sbjct: 188 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/229 (50%), Positives = 144/229 (62%), Gaps = 10/229 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K A+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 155
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 156 A--QSILAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 206
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 146/232 (62%), Gaps = 10/232 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K + A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 36 KTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 95
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 154
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP
Sbjct: 155 A--QSILAIWACQVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPE 205
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN S
Sbjct: 206 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 257
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 145/229 (63%), Gaps = 10/229 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K + A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 155
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP
Sbjct: 156 A--QSILAIWACQVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPE 206
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 207 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 138/224 (61%), Gaps = 8/224 (3%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
AR + LWYG +R ++LGP PSYL GE PGDYG+D AGLS DP AF K E+
Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PEVL+ EPVW++ G LDYLG P +L +Q
Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNP--NLVHAQS 155
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ + Q +LM E R G+ + G+ YPGG FDPL L+ DP F EL
Sbjct: 156 ILAVLGFQVVLMGLVEGFRINGLPGVG------EGNDLYPGGQYFDPLGLADDPTTFAEL 209
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
KVKEIKNGRLAM + GF++QA TGKGP++NLLDH+ +P+ NN
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 208 bits (529), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 143/229 (62%), Gaps = 16/229 (6%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
ES+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 46 ESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG PE+L+ G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 106 MLGALGCTFPELLEKNGV-KFGEAVWFKAGSQIFAEGGLDYLGNP--NLIHAQSILAIWA 162
Query: 145 CQALLMVGPECARYCG---IEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 201
Q +LM E R G E L+PL YPGGA FDPL L+ DP +F ELKVK
Sbjct: 163 TQVVLMGFVEGYRVGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDSFAELKVK 212
Query: 202 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 250
E+KNGRLAM + GF++QA TGKGP+QNL DH++DP+ NN + +
Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNF 261
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 208 bits (529), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 143/227 (62%), Gaps = 10/227 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ A + S WYG +R ++LGP + PSYLTGE P DYG+D AGLS DP F K E+
Sbjct: 42 AKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEV 101
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PE+ G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELFARNG-IKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QS 158
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF EL
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLAEDPEAFAEL 211
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN S
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 207 bits (528), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/244 (47%), Positives = 150/244 (61%), Gaps = 13/244 (5%)
Query: 2 LETKKAALQDSSKF---KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGF 58
L +Q ++KF K ++ + S WYG +R ++LGP + PSYLTGE PGDYG+
Sbjct: 10 LSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGW 69
Query: 59 DVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKL 118
D AGLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 70 DTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIF 128
Query: 119 QGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYP 178
LDYLG P L A Q ++ I CQ +LM E R G PLG D YP
Sbjct: 129 SEGGLDYLGNPSLVHA--QSILAIWACQVVLMGAVEGYRIAG----GPLGEVT--DPIYP 180
Query: 179 GGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDP 238
GG+ FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH++DP
Sbjct: 181 GGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 239
Query: 239 LHNN 242
++NN
Sbjct: 240 VNNN 243
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 207 bits (527), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 142/232 (61%), Gaps = 10/232 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 37 KTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKN 96
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H RWAMLGALG + PE+ G E VW + G LDYLG P L
Sbjct: 97 RELEVIHCRWAMLGALGCVFPELFARNGV-KFGEAVWLKAGSQIFSEGGLDYLGNPSLVH 155
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I CQ LLM E R G PLG+ + D YPGG+ FDPL L++DP
Sbjct: 156 A--QSILAIWACQVLLMGAVEGYRVAG----GPLGVVV--DPLYPGGS-FDPLGLAEDPE 206
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
AF ELKVKE KNGRLAM + GF+IQA TGKGP++NL DH+ DP++NN S
Sbjct: 207 AFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWS 258
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 140/218 (64%), Gaps = 10/218 (4%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
+S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 44 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 104 MLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLVHAQSILAIWA 160
Query: 145 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 204
Q +LM E R G PLG L D YPGGA FDPL L+ DP F ELKVKE+K
Sbjct: 161 VQVVLMGFVEGYRVGG----GPLGEGL--DKVYPGGA-FDPLGLADDPDTFAELKVKELK 213
Query: 205 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 140/218 (64%), Gaps = 10/218 (4%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
+S+WYG +RP++LGP PSYLTGE PGDYG+D AGLS DP F + E++H+RWA
Sbjct: 44 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDYLG P +L +Q ++ I
Sbjct: 104 MLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLVHAQSILAIWA 160
Query: 145 CQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIK 204
Q +LM E R G PLG L D YPGGA FDPL L+ DP F ELKVKE+K
Sbjct: 161 VQVVLMGFVEGYRVGG----GPLGEGL--DKVYPGGA-FDPLGLADDPDTFAELKVKELK 213
Query: 205 NGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
NGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 142/223 (63%), Gaps = 10/223 (4%)
Query: 20 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 79
+ ++ S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 43 KTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
Query: 80 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 139
H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 103 HCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSI 159
Query: 140 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 199
+ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 160 LAIWACQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 212
Query: 200 VKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
VKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 144/232 (62%), Gaps = 10/232 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K + A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 38 KSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKN 97
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 98 RELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 156
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 157 A--QSILAIWATQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 207
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
AF ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH+SDP++NN S
Sbjct: 208 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWS 259
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 146/241 (60%), Gaps = 10/241 (4%)
Query: 2 LETKKAALQDSSKFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVA 61
L K A + + A +A + S+WYG +RP +LGP PSYL+GE PGDYG+D A
Sbjct: 23 LSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTA 82
Query: 62 GLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGE 121
GLS DP F K E++H+RWAMLGALG + PE+L G E VW++ G
Sbjct: 83 GLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGV-KFGEAVWFKAGSQIFAEG 141
Query: 122 TLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGA 181
LDYLG P L A Q ++ I CQ +LM E R G PLG D YPGG+
Sbjct: 142 GLDYLGNPSLVHA--QSILAIWACQVILMGAVEGYRVAG----GPLGEVE--DPIYPGGS 193
Query: 182 LFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHN 241
FDPL L+ DP AF ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH++DP N
Sbjct: 194 -FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVN 252
Query: 242 N 242
N
Sbjct: 253 N 253
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 143/223 (64%), Gaps = 10/223 (4%)
Query: 20 RQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEIL 79
+ A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++
Sbjct: 38 KVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 97
Query: 80 HARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGV 139
H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q +
Sbjct: 98 HSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSI 154
Query: 140 IVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELK 199
+ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELK
Sbjct: 155 LAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAELK 207
Query: 200 VKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
VKE+KNGRLAM + GF++QA TGKGP++NL DHI+DP++NN
Sbjct: 208 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 141/224 (62%), Gaps = 10/224 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PE+ G E VW++ G LDYLG P L A Q
Sbjct: 101 IHCRWAMLGALGCVFPELFARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 157
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF EL
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLADDPEAFAEL 210
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 141/224 (62%), Gaps = 10/224 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G PLG D YPGG+ FDPL L+ DP AF EL
Sbjct: 159 ILAIWACQVVLMGAIEGYRVAG----GPLGEVT--DPLYPGGS-FDPLGLADDPEAFAEL 211
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
KVKEIKNGRLAM + GF++QA TGKGP+ NL+DH++DP++NN
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 143/227 (62%), Gaps = 10/227 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 42 AKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 101
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G PLG + D YPGG+ FDPL L++DP AF EL
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLAEDPEAFAEL 211
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
KVK IKNGRLAM + GF++QA TGKGP++NL DH++DP++NN S
Sbjct: 212 KVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 144/229 (62%), Gaps = 10/229 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K A A+Q + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 36 KTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 95
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H RWAMLGALG + PE+L G E W++ G LDYLG P L
Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLARNGV-KFGEAGWFKAGSQIFSDGGLDYLGNPSLVH 154
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I CQ +LM E R G PLG + D YPGG+ FDPL L++ P
Sbjct: 155 A--QSLLAIWACQVVLMGAVEGYRIAG----GPLGEIV--DPLYPGGS-FDPLGLAERPQ 205
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
AF ELKVKEIKNGRLAM + GF++QA TGKGP+++L DHI+DP++NN
Sbjct: 206 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 145/237 (61%), Gaps = 10/237 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K + A + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 39 KSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKN 98
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 99 RELEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 157
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 158 A--QSILAIWATQVILMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 208
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 250
AF ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH++DP++NN S +
Sbjct: 209 AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 265
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 142/227 (62%), Gaps = 10/227 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D A LS DP F K E+
Sbjct: 42 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEV 101
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q
Sbjct: 102 IHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QS 158
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF EL
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFAEL 211
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNNLLS 245
KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN S
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 141/224 (62%), Gaps = 10/224 (4%)
Query: 19 ARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEI 78
A+ + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E+
Sbjct: 41 AKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEV 100
Query: 79 LHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQG 138
+H RW MLGALG + PE+ G E VW++ G + LDYLG P L A Q
Sbjct: 101 IHCRWTMLGALGCVFPELFARNGV-KFGEAVWFKAGSQIFKEGGLDYLGNPSLVHA--QS 157
Query: 139 VIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEEL 198
++ I CQ +LM E R G PLG + D YPGG+ FDPL L+ DP AF EL
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAG----GPLGEVI--DPLYPGGS-FDPLGLADDPEAFAEL 210
Query: 199 KVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
+VKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 211 EVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 139/221 (62%), Gaps = 10/221 (4%)
Query: 22 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHA 81
A +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+
Sbjct: 56 ASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 115
Query: 82 RWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIV 141
RWAMLGALG + PE+L G E VW++ G LDYLG P L +Q ++
Sbjct: 116 RWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--QLIHAQSILA 172
Query: 142 IAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 201
I CQ +LM E R G PLG D YPGG FDPL L+ DP AF ELKVK
Sbjct: 173 IWACQVILMGAIEGYRVAG----GPLGEVT--DPIYPGGN-FDPLGLADDPDAFAELKVK 225
Query: 202 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
EIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 226 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 141/221 (63%), Gaps = 10/221 (4%)
Query: 22 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHA 81
A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+
Sbjct: 43 ASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 102
Query: 82 RWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIV 141
RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q ++
Sbjct: 103 RWAMLGALGCVFPELLARNG-VKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILA 159
Query: 142 IAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 201
I Q +LM E R G PLG + D YPGGA FDPL L+ DP AF ELKVK
Sbjct: 160 IWAVQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGA-FDPLGLADDPEAFAELKVK 212
Query: 202 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
EIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F + E++H+RWAM
Sbjct: 48 SPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 107
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 108 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA--QSILAIWAT 164
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF ELKVKE+KN
Sbjct: 165 QVILMGAVEGYRVAGN---GPLG--EAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKN 218
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 10/221 (4%)
Query: 22 ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHA 81
+ + S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K E++H
Sbjct: 52 SASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHC 111
Query: 82 RWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIV 141
RWAMLGALG + PE+L G E VW++ G LDYLG P L A Q ++
Sbjct: 112 RWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA--QSILA 168
Query: 142 IAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 201
I CQ +LM E R G PLG D YPGG+ FDPL L++DP AF ELKVK
Sbjct: 169 IWACQVILMGAVEGYRIAG----GPLGEVT--DPIYPGGS-FDPLGLAEDPEAFAELKVK 221
Query: 202 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
EIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 222 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 144/229 (62%), Gaps = 10/229 (4%)
Query: 14 KFKALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKY 73
K A + A + S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 31 KSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 90
Query: 74 FNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHL 133
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L
Sbjct: 91 RELEVIHSRWAMLGALGCVFPELLARNG-VKFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 149
Query: 134 AGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPV 193
A Q ++ I Q +LM E R G PLG + D YPGG+ FDPL L+ DP
Sbjct: 150 A--QSILAIWAVQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPE 200
Query: 194 AFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 201 AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 142/227 (62%), Gaps = 10/227 (4%)
Query: 16 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 75
K + +Q + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 35 KTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 76 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 135
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 95 LEVIHSRWAMLGALGCVFPELLSRNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA- 152
Query: 136 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 195
Q ++ I Q +LM E R G PLG D YPGG+ FDPL L+ DP AF
Sbjct: 153 -QSILAIWATQVILMGAVEGYRIAG----GPLGEVT--DPIYPGGS-FDPLGLADDPEAF 204
Query: 196 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
ELKVKE+KNGRLAM + GF++QA TGKGP++NL DH++ P++NN
Sbjct: 205 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 201 bits (512), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 143/230 (62%), Gaps = 13/230 (5%)
Query: 16 KALARQ---ARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQK 72
KA R+ A +S WYG +R +LGP + PSYLTGE PGDYG+D AGLS DP F K
Sbjct: 47 KATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 106
Query: 73 YFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLH 132
E++H+RWAMLGALG + PE+L G E VW++ G LDYLG P
Sbjct: 107 NRELEVIHSRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGAQIFSEGGLDYLGSP--Q 163
Query: 133 LAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDP 192
L +Q ++ I CQ +LM E R G PLG D YPGG FDPL L+ DP
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAG----GPLGEVT--DPIYPGGN-FDPLGLADDP 216
Query: 193 VAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
AF ++KVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 217 DAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 200 bits (509), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 137/217 (63%), Gaps = 10/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 46 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAM 105
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G L YLG P L A Q ++ I C
Sbjct: 106 LGALGCVFPELLARNGV-KFGEAVWFKKGSQIFSEGGLQYLGNPSLVHA--QSILAIWAC 162
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG + D YPGG+ FDPL L+ D AF ELKVKEIKN
Sbjct: 163 QVVLMGAVEGYRVAG----GPLGEVV--DPLYPGGS-FDPLGLADDAEAFAELKVKEIKN 215
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 141/227 (62%), Gaps = 9/227 (3%)
Query: 16 KALARQARNESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFN 75
K + + S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F +
Sbjct: 37 KTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 76 FEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAG 135
E++H RWAMLGALG + PE+L G E VW++ G LDYLG P L A
Sbjct: 97 LEVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA- 154
Query: 136 SQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAF 195
Q ++ I Q +LM E R G PLG D+ YPGG+ FDPL L+ DP AF
Sbjct: 155 -QSILAIWATQVILMGAVEGYRVAG---EGPLG--EAEDLLYPGGS-FDPLGLATDPEAF 207
Query: 196 EELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
ELKVKEIKNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 139/217 (64%), Gaps = 10/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG + D YPGG+ FDPL L+ DP AF ELKVKE+K
Sbjct: 164 QVVLMGAVEGYRIAG----GPLGEVV--DPLYPGGS-FDPLGLADDPEAFGELKVKELKK 216
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM++ GF++QA TGKGP++NL DHI+DP++NN
Sbjct: 217 GRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 137/221 (61%), Gaps = 16/221 (7%)
Query: 25 ESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWA 84
ES+WYG +RP++LGP PSYLTGE PGDYG+D A +S DP F K E++H RWA
Sbjct: 47 ESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWA 106
Query: 85 MLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAI 144
MLGALG + PE+L G E VW++ G LDY G P +L +Q ++ I
Sbjct: 107 MLGALGCVFPELLAKNG-LKFGEAVWFKAGAQIFSEGGLDYAGNP--NLIHAQSILAIWA 163
Query: 145 CQALLMVGPECARYCG---IEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVK 201
CQ +LM E R G E L+PL PGGA FDPL L+ DP A ELKVK
Sbjct: 164 CQVVLMGLIEGYRVGGGTLGEGLDPL---------LPGGA-FDPLGLADDPEACAELKVK 213
Query: 202 EIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
EIKNGRLAM + GF++QA TGKGP++NL DH++DP+ NN
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 142/250 (56%), Gaps = 18/250 (7%)
Query: 7 AALQDSSKFKALA-RQARNESL---------WYGEERPRWLGPIP-YDYPSYLTGELPGD 55
AAL S KAL RQ R + + +YG +R ++LGP D P YLTGE PGD
Sbjct: 2 AALIARSGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGD 61
Query: 56 YGFDVAGLSKDPMAFQKYFNFEILHARWAMLGALGALVPEVLDMVGAFHLVEPVWWRVGY 115
YG+D AGLS DP F +Y E++HARWA+LGALG L PE+L EPVW++ G
Sbjct: 62 YGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGA 121
Query: 116 SKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPECARYCGIEALEPLGIFLPGDI 175
L+YLG L A Q +I Q +LM E R G G D
Sbjct: 122 QIFADGGLNYLGNESLIHA--QSIIATLAVQVVLMGLAEAYRANGGSE----GFLDDLDT 175
Query: 176 NYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHI 235
YPGG FDPL L+ DP F ELKVKEIKNGRLAM + LGF++QA TGKGPVQNL DH+
Sbjct: 176 LYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHL 234
Query: 236 SDPLHNNLLS 245
+DP N +
Sbjct: 235 ADPTVNKAFA 244
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 139/217 (64%), Gaps = 10/217 (4%)
Query: 26 SLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARWAM 85
S WYG +R +LGP+ + PSYLTGE PGDYG+D AGLS DP F K E++H+RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 86 LGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAIC 145
LGALG + PE+L G E VW++ G LDYLG P L A Q ++ I C
Sbjct: 107 LGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA--QSILAIWAC 163
Query: 146 QALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 205
Q +LM E R G PLG + D YPGG FDPL L+ DP AF ++KVKE+KN
Sbjct: 164 QVVLMGAIEGYRVAG----GPLGEVV--DPLYPGGT-FDPLGLADDPEAFADVKVKELKN 216
Query: 206 GRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
GRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 140/219 (63%), Gaps = 10/219 (4%)
Query: 24 NESLWYGEERPRWLGPIPYDYPSYLTGELPGDYGFDVAGLSKDPMAFQKYFNFEILHARW 83
++S WYG +R ++LGP + PSYLTGE PGDYG+D AGLS DP F K E++H+RW
Sbjct: 44 SDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 103
Query: 84 AMLGALGALVPEVLDMVGAFHLVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIA 143
AMLGALG + PE+L G E VW++ G LDYLG P L A Q ++ I
Sbjct: 104 AMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA--QSILSIW 160
Query: 144 ICQALLMVGPECARYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEI 203
Q +LM E R G PLG + D YPGG+ FDPL L++DP ELKVKE+
Sbjct: 161 ATQVILMGAVEGYRVAG----GPLGEIV--DPLYPGGS-FDPLGLAEDPERSAELKVKEL 213
Query: 204 KNGRLAMVAWLGFYIQAAFTGKGPVQNLLDHISDPLHNN 242
KNGRLAM + GF++QA TGKGP++NL DH++DP++NN
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,933,583
Number of Sequences: 539616
Number of extensions: 5398902
Number of successful extensions: 10689
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 10237
Number of HSP's gapped (non-prelim): 161
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)