BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021928
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis
thaliana GN=At2g37660 PE=1 SV=2
Length = 325
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 176 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235
+A GV+ ++L+ + + + ++ N + E L SGIPYTIIR G L
Sbjct: 190 DAAKAAGVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGL 249
Query: 236 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALE 271
Q+ GG + G E ++++ D A +CV+AL+
Sbjct: 250 QDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQ 289
>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3
SV=1
Length = 319
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 33/202 (16%)
Query: 100 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLK 157
++L+ G +G+ V+L + K +++ LV++ R N ++ +G E + GD S + +
Sbjct: 2 SLLIIGGTGTLGRQVVLQALTKGYQVRCLVRNFRKANFLKEWGA--ELIYGDLSRPETIP 59
Query: 158 TALRGVRSIICPSEGFISNAGSLKGVQH-----VILLSQLS-----VYRGSGGIQALMKG 207
L+G+ ++I S S+ +LK V +I +Q + V+ S ++ +
Sbjct: 60 PCLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNI 119
Query: 208 NARKLAEQDESMLMASGIPYTIIRTG-------------VLQNTPGGKQGFQFEEGCAAN 254
++ E+ L S IPYT+ R VL+N P E C +
Sbjct: 120 PLMEMKFGIETKLQQSNIPYTVFRLAGFYQGLIEQYAIPVLENLPILVTN---ENTCVS- 175
Query: 255 GSLSKEDAAFICVEALESIPQT 276
+ +D A C+ +L+ +P+T
Sbjct: 176 -YMDTQDIAKFCLRSLQ-LPET 195
>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana
GN=At5g02240 PE=1 SV=1
Length = 253
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 176 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 235
+A + GV+H++++ + + L GN + E L SG PYTIIR G L
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 236 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS- 290
+ GG + G E ++ + D A +C++AL F++ + E S
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 237
Query: 291 ---DWKKCFSRLMEK 302
D+K FS++ +
Sbjct: 238 PTKDFKALFSQVTSR 252
>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis
thaliana GN=At2g34460 PE=1 SV=1
Length = 280
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 89/232 (38%), Gaps = 36/232 (15%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT----------------YVE 144
V V G+ ++ L+ + +KA V+D A SF +
Sbjct: 49 VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEGPDKLA 108
Query: 145 SMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSL--------KGVQHVILLSQLSVYR 196
+ GD S T R I P + + N G++ +GV+ +L+S + V
Sbjct: 109 EVIGDDSQAVICATGFRPGFDIFTPWK--VDNFGTVNLVDACRKQGVEKFVLVSSILVNG 166
Query: 197 GSGGIQAL--------MKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFE 248
+ G Q L + G Q E + SGI YTI+R G L+N P
Sbjct: 167 AAMG-QILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEP 225
Query: 249 EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVV-NGEEKVSDWKKCFSRL 299
E GS+S++ A + VEAL + + E+V E +K F+ +
Sbjct: 226 EDTLYEGSISRDLVAEVAVEALLQEESSFKVVEIVARAEAPKRSYKDLFASV 277
>sp|Q8KU07|AZOB_XENAZ NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2
Length = 286
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 101 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 160
+LV G IG V+ L + KALV+D A E V++ AGD + L AL
Sbjct: 2 ILVVGGTGTIGSEVVRLLQEAKLPFKALVRDAAKARELNARGVQTAAGDLREPRTLPAAL 61
Query: 161 RGVRSI-----ICPSE----GFISNAGSLKGVQHVIL 188
GV + + P + + A GV+H ++
Sbjct: 62 GGVDKVFVVTPLVPDQVQMRAALITAAKTAGVKHFVM 98
>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain
168) GN=yhfK PE=2 SV=1
Length = 214
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 217 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT 276
+ +L ASG+ YTIIR G L+N PG G G +S++D A + +L+
Sbjct: 137 DKILEASGLTYTIIRPGGLRNEPG--TGTVSAAKDLERGFISRDDVAKTVIASLDEKNTE 194
Query: 277 GLIFEVVNGEEKVSD 291
F++ G+ +++
Sbjct: 195 NRAFDLTEGDTPIAE 209
>sp|P39315|QOR2_ECOLI Quinone oxidoreductase 2 OS=Escherichia coli (strain K12) GN=qorB
PE=1 SV=1
Length = 286
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 34/152 (22%)
Query: 101 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFL 156
+ +T +G VI SL+ V ++I A+V++ K A+ + G V D ++ L
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ--ADYGDEAAL 59
Query: 157 KTALRGVRSII----------CPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 206
+AL+GV ++ P + NA GV+ + S L+
Sbjct: 60 TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTS-------------LLH 106
Query: 207 GNARKLAEQDES-----MLMASGIPYTIIRTG 233
+ L DE ML SGI YT++R G
Sbjct: 107 ADTSPLGLADEHIETEKMLADSGIVYTLLRNG 138
>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32
PE=2 SV=1
Length = 805
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 72 YGAPDLLPKDGSNEEDEEKEDEFPEARDAVLVTDGDSDIGQM-VILSLIVKRTRIKALVK 130
YG L+P DG ++ D + + +R+ L +SDI +IL ++ R + +++
Sbjct: 600 YGISQLIPIDGLDKSDPHVDPHYFVSREMTL----ESDIYAFGIILLQLLTRRPVSGILR 655
Query: 131 DKRNAME--SFGTYVESMAGD---ASNKKFLKTALR 161
D + A+E + +++ AGD A KK A+R
Sbjct: 656 DVKCALENDNISAVLDNSAGDWPVARGKKLANVAIR 691
>sp|Q7ZXX2|KIF19_XENLA Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1
Length = 997
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 163 VRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 214
+R ++ PS G++ KGV V ++++S +Q LMKGN ++ E
Sbjct: 158 IRDLLNPSLGYLDLREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQE 209
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,787,324
Number of Sequences: 539616
Number of extensions: 4605059
Number of successful extensions: 15653
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 15622
Number of HSP's gapped (non-prelim): 43
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)