Query 021929
Match_columns 305
No_of_seqs 354 out of 1913
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 11:26:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021929.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021929hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xnga1 c.26.2.1 (A:3-257) NH3 100.0 5.7E-29 4.2E-33 226.9 13.0 170 14-228 2-252 (255)
2 d1kqpa_ c.26.2.1 (A:) NH3-depe 99.9 7E-27 5.1E-31 215.7 15.3 110 8-149 11-122 (271)
3 d1wxia1 c.26.2.1 (A:2-275) NH3 99.9 2E-24 1.5E-28 199.3 13.6 111 9-147 12-123 (274)
4 d1gpma1 c.26.2.1 (A:208-404) G 99.2 7.5E-11 5.5E-15 97.3 11.9 88 16-142 4-91 (197)
5 d1jgta1 c.26.2.1 (A:210-508) b 98.7 4.7E-08 3.4E-12 89.3 11.9 88 9-136 4-93 (299)
6 d1wy5a1 c.26.2.5 (A:1-216) Til 98.4 1E-07 7.6E-12 82.7 4.6 125 14-171 3-133 (216)
7 d1q15a1 c.26.2.1 (A:206-501) b 98.3 4.6E-07 3.4E-11 82.3 8.3 94 10-143 6-103 (296)
8 d2pg3a1 c.26.2.1 (A:1-230) Que 98.2 2.2E-06 1.6E-10 73.2 9.0 70 35-142 1-70 (230)
9 d1j20a1 c.26.2.1 (A:1-165) Arg 98.2 2.5E-06 1.8E-10 66.3 8.0 64 37-139 2-65 (165)
10 d1vl2a1 c.26.2.1 (A:2-169) Arg 98.2 3.4E-06 2.5E-10 65.9 8.7 66 36-140 2-67 (168)
11 d2c5sa1 c.26.2.6 (A:174-391) T 98.1 1.2E-06 8.7E-11 73.9 5.7 70 34-141 2-78 (218)
12 d1k92a1 c.26.2.1 (A:1-188) Arg 98.1 1.9E-06 1.4E-10 68.9 5.9 66 36-139 11-77 (188)
13 d1ni5a1 c.26.2.5 (A:0-226) tRN 98.1 5.9E-06 4.3E-10 71.4 9.2 69 35-136 13-83 (227)
14 d1ct9a1 c.26.2.1 (A:193-516) A 97.9 1.8E-05 1.3E-09 71.3 9.2 92 15-136 16-109 (324)
15 d1zuna1 c.26.2.2 (A:1-211) Sul 97.7 0.00013 9.4E-09 58.8 10.3 80 24-139 17-96 (211)
16 d1sura_ c.26.2.2 (A:) Phosphoa 97.0 0.0015 1.1E-07 55.4 10.0 63 36-136 45-107 (215)
17 d2d13a1 c.26.2.1 (A:2-227) Hyp 96.1 0.0022 1.6E-07 55.8 4.9 68 34-136 2-72 (226)
18 d1vbka1 c.26.2.6 (A:176-307) H 95.4 0.011 8E-07 47.3 5.8 48 37-126 6-53 (132)
19 d1fsfa_ c.124.1.1 (A:) Glucosa 53.9 5.2 0.00038 33.6 4.1 39 9-47 3-44 (266)
20 d1ne7a_ c.124.1.1 (A:) Glucosa 39.0 11 0.00081 32.1 3.8 38 9-46 3-43 (281)
21 d2gnpa1 c.124.1.8 (A:56-317) T 38.8 39 0.0028 27.9 7.4 31 15-45 33-63 (262)
22 d2ak3a1 c.37.1.1 (A:0-124,A:16 37.6 26 0.0019 27.1 5.8 38 99-140 6-43 (189)
23 d1t1va_ c.47.1.14 (A:) SH3BGRL 37.1 47 0.0034 22.9 6.6 37 102-138 5-44 (93)
24 d1zp6a1 c.37.1.25 (A:6-181) Hy 35.5 16 0.0012 26.9 3.9 34 104-139 9-42 (176)
25 d1e6ca_ c.37.1.2 (A:) Shikimat 33.3 15 0.0011 27.8 3.4 33 103-139 6-38 (170)
26 d1zina1 c.37.1.1 (A:1-125,A:16 32.9 33 0.0024 25.4 5.5 34 103-140 4-37 (182)
27 d1efpb_ c.26.2.3 (B:) Small, b 31.0 42 0.003 28.0 6.3 30 103-132 117-146 (246)
28 d1gpua3 c.48.1.1 (A:535-680) T 30.1 1.1E+02 0.0077 23.2 9.4 33 181-218 105-137 (146)
29 d1qf9a_ c.37.1.1 (A:) UMP/CMP 27.4 58 0.0043 24.4 6.2 37 100-140 7-43 (194)
30 d1vl1a_ c.124.1.1 (A:) 6-phosp 26.4 26 0.0019 28.2 3.9 27 17-45 14-40 (218)
31 d1xkya1 c.1.10.1 (A:1-292) Dih 24.0 1.5E+02 0.011 23.9 8.7 26 26-51 29-54 (292)
32 d1q3ta_ c.37.1.1 (A:) CMP kina 22.8 51 0.0037 25.1 5.0 40 98-142 3-42 (223)
33 d1itza3 c.48.1.1 (A:540-675) T 21.5 82 0.006 23.1 5.8 28 181-210 109-136 (136)
34 d1usga_ c.93.1.1 (A:) Leucine- 21.0 1.1E+02 0.0084 24.2 7.2 38 97-135 41-78 (346)
No 1
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}
Probab=99.95 E-value=5.7e-29 Score=226.89 Aligned_cols=170 Identities=19% Similarity=0.134 Sum_probs=130.5
Q ss_pred cHHHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchh
Q 021929 14 PEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESR 93 (305)
Q Consensus 14 peeEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~ 93 (305)
+.+++...+..||++|++++|.++++||||||||||++|+|+ +++ +++
T Consensus 2 d~~~~~~~l~~~l~~~~~~~G~k~vvvglSGGVDSsv~A~L~-------~~a---------------~~~---------- 49 (255)
T d1xnga1 2 DYQKLIVYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLC-------QKV---------------FKE---------- 49 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHH-------HHH---------------HGG----------
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHH-------HHH---------------hhh----------
Confidence 468899999999999999999999999999999999999998 455 334
Q ss_pred hhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHHHHhhhh-----cCCCCccc------------
Q 021929 94 EFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTL-----TGKRPRYK------------ 156 (305)
Q Consensus 94 e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~~~f~~~-----~g~~prfr------------ 156 (305)
++++++|++..+++++.++|+.+|+.+|++|.+++++.+.+.+...+... .|...|.|
T Consensus 50 -----~v~~v~mp~~~~~~~~~~~A~~la~~lgi~~~~i~~~~~~~~~~~~~~~~~~~~~~n~~ar~r~~~l~~~a~~~~ 124 (255)
T d1xnga1 50 -----NAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSD 124 (255)
T ss_dssp -----GEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----hcchhcCcchhcchhhHHHHHHHHHHhhhcchhhhhHHHHhhhhhhccchhhhhHHHHHHHHhHHHHHHHHhhcC
Confidence 49999999999999999999999999999999999998877766655431 11122222
Q ss_pred ----------------------------------------------------------------ccccccCCChhhhhhh
Q 021929 157 ----------------------------------------------------------------LDEVDMGMTYEELSVY 172 (305)
Q Consensus 157 ----------------------------------------------------------------tDE~dmGmtY~eLd~y 172 (305)
+||++|||||+++|.|
T Consensus 125 ~~v~gt~n~~e~~~g~~t~~gd~~~~l~Pl~dL~K~eVr~LA~~lglP~~i~~k~ps~~L~~~q~de~~lg~~Y~~lD~~ 204 (255)
T d1xnga1 125 SLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPL 204 (255)
T ss_dssp CEEBCCCCHHHHHHTCSCTTTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHTSCCCCCSSTTCCHHHHHSSCHHHHHHH
T ss_pred CccCCCccHHHHhccccchhhhhccchhhhcCcCHHHHHHHHHHcCCchhhhcCCCCcccccccCcHhhhCCChHHHHHH
Confidence 8999999999999988
Q ss_pred heeeeccccChHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHhhhcccccCCCcc
Q 021929 173 GRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSY 228 (305)
Q Consensus 173 ~rlrk~~~~gP~~mf~~l~~~w~~~~s~~eia~kVk~ff~~~~~NrHKrt~l~Ps~ 228 (305)
.+-......++....+.+... ++++ +.|++|.+++.+|+|||+ +||..
T Consensus 205 l~~~~~~~~~~~~~~~~~~~~---~~~~----~~v~~i~~~~~~~~~Kr~-~p~~~ 252 (255)
T d1xnga1 205 LKDIEALFQTKPIDTETLAQL---GYDE----ILVKNITSRIQKNAFKLE-LPAIA 252 (255)
T ss_dssp HHHHHHHSSSSCCCHHHHHHT---TCCH----HHHHHHHHHHHHTGGGGS-CCEEC
T ss_pred HHHHHhhcccccCCHHHHHHc---CCCH----HHHHHHHHHHHHhHhccc-CCCCc
Confidence 653222222222222222222 2443 568899999999999997 67754
No 2
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=99.94 E-value=7e-27 Score=215.65 Aligned_cols=110 Identities=23% Similarity=0.270 Sum_probs=83.1
Q ss_pred ccccCCcHHHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHH-hhccCCC
Q 021929 8 KITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIR-IGRYANG 86 (305)
Q Consensus 8 ~~~~~~peeEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~-ig~~~~~ 86 (305)
.+++..+.+|....+++|||||++++|.+||+||||||||||+||+|+ +++++. ++. .+.+
T Consensus 11 ~~~p~~d~~e~i~~~v~~lrdy~~ksg~~gvvvglSGGIDSAv~a~L~-------~~A~~~--------~~~~~g~~--- 72 (271)
T d1kqpa_ 11 HVKPSIDPKQEIEDRVNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLA-------QLAVES--------IREEGGDA--- 72 (271)
T ss_dssp TCCSSCCHHHHHHHHHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHH-------HHHHHH--------HHHTTCCC---
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHH-------HHHHHH--------HHHhcCCc---
Confidence 345554444445688999999999999999999999999999999987 344221 111 1323
Q ss_pred CCCcchhhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcE-EEEechHHHHHHHHHhhhhc
Q 021929 87 EFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWH-LDVSIDTVVSAFLSLFQTLT 149 (305)
Q Consensus 87 ~~p~~~~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h-~~i~Id~~v~a~~~~f~~~~ 149 (305)
+++++.||.. +..+.++|+.+++.+|+.+ ..++|.++++++.+.+...+
T Consensus 73 ------------~v~~v~mP~~--~~~~~~~a~~~~~~~~~~~~~~i~I~~~~~~~~~~~~~~~ 122 (271)
T d1kqpa_ 73 ------------QFIAVRLPHG--TQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQET 122 (271)
T ss_dssp ------------EEEEEECCSS--SCTTHHHHHHHHHHHCCSEEEECCCHHHHHHHHHHHHHHH
T ss_pred ------------eeeeeecCcc--ccchhhhHHHHHHHhccccceEEeehHHHHhHHHHHHHhh
Confidence 6999999953 3456788999999999976 57999999999888776543
No 3
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=2e-24 Score=199.29 Aligned_cols=111 Identities=19% Similarity=0.138 Sum_probs=77.1
Q ss_pred cccCCcHHHHHhcHHHHHHHHHHHhC-CCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCC
Q 021929 9 ITYHSPEEEIAFGPGCWLWDYLRRSG-ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGE 87 (305)
Q Consensus 9 ~~~~~peeEi~~~~a~~L~DyLrrsg-~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~ 87 (305)
+++-.+.||....+..||+||+++++ .+|++||||||||||+||+|+ ++|++.. . ...+.+.
T Consensus 12 ~~p~~~~ee~i~~~v~~L~dy~~k~~~~k~vVvGlSGGIDSav~A~L~-------~~Alg~~--~-----v~~g~~~--- 74 (274)
T d1wxia1 12 AKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLC-------QMAINEL--R-----LETGNES--- 74 (274)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHH-------HHHHHHH--H-----HHHCCTT---
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcCCCCeEEEECCCCHHHHHHHHHH-------HHHHHHH--h-----hhhcccc---
Confidence 34433444444666779999999855 689999999999999999999 5664320 0 0122221
Q ss_pred CCcchhhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHHHHhhh
Q 021929 88 FPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQT 147 (305)
Q Consensus 88 ~p~~~~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~~~f~~ 147 (305)
-.++++.||...++ .+.+.+..++..+|..+..++|+.++.++.+.+..
T Consensus 75 ----------~~~i~v~mp~~~~~-~~~d~~~~~~~~~~~~~~~i~i~~~~~~~~~~l~~ 123 (274)
T d1wxia1 75 ----------LQFIAVRLPYGVQA-DEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALRE 123 (274)
T ss_dssp ----------CEEEEEECCSSSCT-THHHHHHHHHHHCCSEEEECCCHHHHHHHHHHHHH
T ss_pred ----------ceEEEEecCCcccc-hHHHHHHHHHhhcCccccccccchHHHHHHHhhhh
Confidence 13678999864332 33345566788889999999999999888776643
No 4
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}
Probab=99.19 E-value=7.5e-11 Score=97.26 Aligned_cols=88 Identities=20% Similarity=0.235 Sum_probs=66.9
Q ss_pred HHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhh
Q 021929 16 EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREF 95 (305)
Q Consensus 16 eEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~ 95 (305)
+++......+|++++ |.++++|+|||||||+++|+++ +++ .+..
T Consensus 4 ~~~i~~~~~~ik~~v---~~~kvvV~lSGGVDSsv~a~ll-------~~~--------------~g~~------------ 47 (197)
T d1gpma1 4 AKIIDDAVARIREQV---GDDKVILGLSGGVDSSVTAMLL-------HRA--------------IGKN------------ 47 (197)
T ss_dssp HHHHHHHHHHHHHHH---TTCEEEEECCSSHHHHHHHHHH-------HHH--------------HGGG------------
T ss_pred HHHHHHHHHHHHHHh---CCCcEEEEcCCCHHHHHHHHHH-------HHh--------------cCce------------
Confidence 455555667888887 5689999999999999999999 565 3433
Q ss_pred cCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHH
Q 021929 96 AKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFL 142 (305)
Q Consensus 96 ~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~ 142 (305)
+...+..........+.+.|+.++..+|+.|..+++...+....
T Consensus 48 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~ 91 (197)
T d1gpma1 48 ---LTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSAL 91 (197)
T ss_dssp ---EEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHHHHHHHH
T ss_pred ---eeeeecccccccccchHHHHHHHHHhcCcccccccHHHHHhhhh
Confidence 23333334445566788999999999999999999998877653
No 5
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=98.69 E-value=4.7e-08 Score=89.26 Aligned_cols=88 Identities=28% Similarity=0.285 Sum_probs=68.1
Q ss_pred cccCCcHHHHHhcHHHHHHHHHHHhC--CCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCC
Q 021929 9 ITYHSPEEEIAFGPGCWLWDYLRRSG--ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANG 86 (305)
Q Consensus 9 ~~~~~peeEi~~~~a~~L~DyLrrsg--~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~ 86 (305)
-+...|++|.+..+-.-|.+-+++.- ...+.+.||||+||+++|+++. +. ...
T Consensus 4 ~~~~~~~~ea~~~~r~~L~~AV~~rl~~~~~~gv~LSGGlDSs~iaa~~~-------~~---------------~~~--- 58 (299)
T d1jgta1 4 SRRILPEGEAVAAVRAALEKAVAQRVTPGDTPLVVLSGGIDSSGVAACAH-------RA---------------AGE--- 58 (299)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHHHHSCTTCCCEEECCSSHHHHHHHHHHH-------HH---------------HSS---
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCEEEEccCHHHHHHHHHHHH-------Hh---------------CCC---
Confidence 35668899999888888888887753 3345567999999999999882 32 222
Q ss_pred CCCcchhhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechH
Q 021929 87 EFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDT 136 (305)
Q Consensus 87 ~~p~~~~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~ 136 (305)
+.|+..+.+++. +...|+.+|+.+|+.|+.+.++.
T Consensus 59 -------------~~~~s~~~~~~~--e~~~A~~va~~lg~~h~~~~i~~ 93 (299)
T d1jgta1 59 -------------LDTVSMGTDTSN--EFREARAVVDHLRTRHREITIPT 93 (299)
T ss_dssp -------------CEEEEEECSSCC--CHHHHHHHHHHHTCEEEEEECCH
T ss_pred -------------cceeecCccchH--HHHHHHHhhhcccccccccceeh
Confidence 567777776663 67889999999999999998854
No 6
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.37 E-value=1e-07 Score=82.70 Aligned_cols=125 Identities=18% Similarity=0.057 Sum_probs=71.7
Q ss_pred cHHHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchh
Q 021929 14 PEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESR 93 (305)
Q Consensus 14 peeEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~ 93 (305)
|+..+.......+.++=-=++.++++||+|||+||++.+.++..++. . .+.
T Consensus 3 ~~~~~~~k~~~~~~~~~l~~~~~kv~Va~SGG~DS~~Ll~lL~~~~~----~--------------~~~----------- 53 (216)
T d1wy5a1 3 PESRVIRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKN----Y--------------FSL----------- 53 (216)
T ss_dssp HHHHHHHHHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTT----T--------------TTC-----------
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEeCCcHHHHHHHHHHHHHHH----h--------------cCC-----------
Confidence 45555555544444442224456899999999999999888832110 0 111
Q ss_pred hhcCCeEEEEEE--cCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHH-HHhhhhcCCCCccc---ccccccCCChh
Q 021929 94 EFAKRIFYTVFM--GSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFL-SLFQTLTGKRPRYK---LDEVDMGMTYE 167 (305)
Q Consensus 94 e~~~~~l~t~yM--~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~-~~f~~~~g~~prfr---tDE~dmGmtY~ 167 (305)
+.+..++. +...+|..+.+.++.+|+++|++++..+++.....-. ..-...+++.-||+ .-..+.|.+|.
T Consensus 54 ----~~i~~~~vdh~~r~~s~~~~~~~~~~~~~l~i~~~i~~~~~~~~~~~~~~~~~~~~R~~Ry~~l~~~a~~~~~~~i 129 (216)
T d1wy5a1 54 ----KEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCI 129 (216)
T ss_dssp ----SEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred ----CcEEEEEeecccccchhhhhhHHHHHHHhhhhhhhhhccchhhhccCCccchHHHHHHHHHHHhhhhcccccccee
Confidence 12444433 3334566778889999999999999998875332210 00001122222333 11224677777
Q ss_pred hhhh
Q 021929 168 ELSV 171 (305)
Q Consensus 168 eLd~ 171 (305)
.|+|
T Consensus 130 a~GH 133 (216)
T d1wy5a1 130 ATAH 133 (216)
T ss_dssp ECCC
T ss_pred Eeee
Confidence 7776
No 7
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]}
Probab=98.34 E-value=4.6e-07 Score=82.31 Aligned_cols=94 Identities=24% Similarity=0.289 Sum_probs=67.2
Q ss_pred ccCCcHHHHHhcHHHHHHHHHHHhCC--CceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCC
Q 021929 10 TYHSPEEEIAFGPGCWLWDYLRRSGA--SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGE 87 (305)
Q Consensus 10 ~~~~peeEi~~~~a~~L~DyLrrsg~--~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~ 87 (305)
..-.|+|++...+-..|..-+.+... ..+-+.||||+||+++|+++. +. ..
T Consensus 6 ~~~~~~e~~~~~id~~l~~~v~~~~~~~~~VGv~LSGGlDSslia~~~~-------~~---------------~~----- 58 (296)
T d1q15a1 6 LLALPREPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTALAS-------RH---------------FK----- 58 (296)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHHGGGCSEEEEECCSSHHHHHHHHHHT-------TT---------------CS-----
T ss_pred ccCCChHHHHHHHHHHHHHHHHHhccCCCEEEEEccCcHHHHHHHHHHH-------hc---------------CC-----
Confidence 34578888888777777777766443 457788999999999998772 21 11
Q ss_pred CCcchhhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechH--HHHHHHH
Q 021929 88 FPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDT--VVSAFLS 143 (305)
Q Consensus 88 ~p~~~~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~--~v~a~~~ 143 (305)
.+.|+..+.+++. +.+.|+++|+.+|..|+.+.++. ..+.+.+
T Consensus 59 -----------~~~tfs~~~~~~~--e~~~A~~va~~l~~~h~~i~~~~~~~~~~l~~ 103 (296)
T d1q15a1 59 -----------KLNTYSIGTELSN--EFEFSQQVADALGTHHQMKILSETEVINGIIE 103 (296)
T ss_dssp -----------EEEEEEEEETTBC--CHHHHHHHHHHHTCEEEEEEECHHHHHHHHHH
T ss_pred -----------CCceEEeccCCCc--hHHHHHHHHhhccccceEEEeeehhhhccchh
Confidence 3667777766553 56789999999999999888754 4444444
No 8
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}
Probab=98.20 E-value=2.2e-06 Score=73.23 Aligned_cols=70 Identities=13% Similarity=0.138 Sum_probs=55.0
Q ss_pred CCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHH
Q 021929 35 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQET 114 (305)
Q Consensus 35 ~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et 114 (305)
+++++|.||||+||+++|+++ .+. +.+ ++++++-..+-...+
T Consensus 1 mkK~Vvl~SGGlDS~v~a~~l-------~~~---------------g~~----------------v~~v~~~ygqr~~~E 42 (230)
T d2pg3a1 1 MKRAVVVFSGGQDSTTCLIQA-------LQD---------------YDD----------------VHCITFDYGQRHRAE 42 (230)
T ss_dssp CCEEEEECCSSHHHHHHHHHH-------HHH---------------CSE----------------EEEEEEESSSSCHHH
T ss_pred CCeEEEEcCCcHHHHHHHHHH-------HHc---------------CCe----------------EEEEEEECCCccHHH
Confidence 468999999999999999988 444 433 788887655556778
Q ss_pred HHHHHHHHHHhCCcEEEEechHHHHHHH
Q 021929 115 RMRAKKLADEIGSWHLDVSIDTVVSAFL 142 (305)
Q Consensus 115 ~~~A~~LA~~iGi~h~~i~Id~~v~a~~ 142 (305)
.+.++..++.+|+.+..++.......+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (230)
T d2pg3a1 43 IEVAQELSQKLGAAAHKVLDVGLLNELA 70 (230)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTHHHHTS
T ss_pred HHHHHHhHHhhccccccccchhhhhhcc
Confidence 8999999999999988887776655433
No 9
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=98.16 E-value=2.5e-06 Score=66.35 Aligned_cols=64 Identities=16% Similarity=0.026 Sum_probs=46.5
Q ss_pred ceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHHHH
Q 021929 37 GFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRM 116 (305)
Q Consensus 37 g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~~ 116 (305)
+++||+|||+||+++|.++ .+. .+. .+.++++..... .+.+
T Consensus 2 KvlvA~SGG~DS~vll~lL-------~e~--------------~~~----------------~vi~~~~~~~~~--~~~~ 42 (165)
T d1j20a1 2 KIVLAYSGGLDTSIILKWL-------KET--------------YRA----------------EVIAFTADIGQG--EEVE 42 (165)
T ss_dssp EEEEECCSSHHHHHHHHHH-------HHH--------------HTC----------------EEEEEEEESSCS--SCHH
T ss_pred EEEEEEeCHHHHHHHHHHH-------HHc--------------CCC----------------EEEEEEeccCCh--HHHH
Confidence 5899999999999999988 444 332 267787775433 3456
Q ss_pred HHHHHHHHhCCcEEEEechHHHH
Q 021929 117 RAKKLADEIGSWHLDVSIDTVVS 139 (305)
Q Consensus 117 ~A~~LA~~iGi~h~~i~Id~~v~ 139 (305)
.+...+..+|..+....+.....
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~ 65 (165)
T d1j20a1 43 EAREKALRTGASKAIALDLKEEF 65 (165)
T ss_dssp HHHHHHHHHTCSEEEEEECHHHH
T ss_pred HHHHHHHhccccceeeeehhhhh
Confidence 67778888998887777665444
No 10
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.16 E-value=3.4e-06 Score=65.91 Aligned_cols=66 Identities=14% Similarity=0.072 Sum_probs=44.9
Q ss_pred CceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHHH
Q 021929 36 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 115 (305)
Q Consensus 36 ~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~ 115 (305)
++++|+||||+||+++|.++ ++. +.+ +.++++....+.. ..
T Consensus 2 ~KIvvalSGGvDS~vl~~lL-------~~~---------------~~~----------------v~a~~~~~~~~~~-~~ 42 (168)
T d1vl2a1 2 EKVVLAYSGGLDTSVILKWL-------CEK---------------GFD----------------VIAYVANVGQKDD-FV 42 (168)
T ss_dssp CEEEEECCSSHHHHHHHHHH-------HHT---------------TCE----------------EEEEEEESSCCCC-HH
T ss_pred CEEEEEeccHHHHHHHHHHH-------HHc---------------CCe----------------EEEEEcccCCCcc-hh
Confidence 57999999999999999998 343 333 7777777655443 33
Q ss_pred HHHHHHHHHhCCcEEEEechHHHHH
Q 021929 116 MRAKKLADEIGSWHLDVSIDTVVSA 140 (305)
Q Consensus 116 ~~A~~LA~~iGi~h~~i~Id~~v~a 140 (305)
...+..+...........+......
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (168)
T d1vl2a1 43 AIKEKALKTGASKVYVEDLRREFVT 67 (168)
T ss_dssp HHHHHHHHHTCSEEEEEECHHHHHH
T ss_pred HHHHHHHHhcCccchhhhhHHHHhh
Confidence 4445566666666666666554443
No 11
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=98.12 E-value=1.2e-06 Score=73.87 Aligned_cols=70 Identities=26% Similarity=0.340 Sum_probs=48.8
Q ss_pred CCC-ceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCC-CCC
Q 021929 34 GAS-GFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSE-NSS 111 (305)
Q Consensus 34 g~~-g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~-nSs 111 (305)
|.+ +++|++|||+||+++|.++ .+. |.+ ++++++-.. ..+
T Consensus 2 ~~~gKvvv~~SGG~DS~vla~ll-------~k~---------------g~~----------------v~av~~~~~~~~~ 43 (218)
T d2c5sa1 2 GVGGKVMVLLSGGIDSPVAAYLT-------MKR---------------GVS----------------VEAVHFHSPPFTS 43 (218)
T ss_dssp TTTEEEEEECCSSSHHHHHHHHH-------HHB---------------TEE----------------EEEEEEECTTTSC
T ss_pred CCCCEEEEEecCcHHHHHHHHHH-------HHc---------------CCe----------------EEEEEEeCCCccc
Confidence 344 4999999999999998887 332 322 778887543 356
Q ss_pred HHHHHHHHHHHHHhCCc-----EEEEechHHHHHH
Q 021929 112 QETRMRAKKLADEIGSW-----HLDVSIDTVVSAF 141 (305)
Q Consensus 112 ~et~~~A~~LA~~iGi~-----h~~i~Id~~v~a~ 141 (305)
....+.+..+++.++.+ ...++..+....+
T Consensus 44 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 78 (218)
T d2c5sa1 44 ERAKQKVIDLAQELTKYCKRVTLHLVPFTEVQKTI 78 (218)
T ss_dssp HHHHHHHHHHHHHHGGGSSCEEEEEEECHHHHHHH
T ss_pred hHHHHHHHhhhccccccccccceEEeecchhhhhh
Confidence 77888899999998765 3455555555543
No 12
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.08 E-value=1.9e-06 Score=68.85 Aligned_cols=66 Identities=14% Similarity=0.083 Sum_probs=41.6
Q ss_pred CceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHHH
Q 021929 36 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 115 (305)
Q Consensus 36 ~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~ 115 (305)
++++|++|||+||++++.++ ++. +.+ ++++++...+...+..
T Consensus 11 kKv~vA~SGGvDSsvll~lL-------~~~---------------g~~----------------v~~~~~~~~~~~~~~~ 52 (188)
T d1k92a1 11 QRIGIAFSGGLDTSAALLWM-------RQK---------------GAV----------------PYAYTANLGQPDEEDY 52 (188)
T ss_dssp SEEEEECCSSHHHHHHHHHH-------HHT---------------TCE----------------EEEEEEECCCTTCSCT
T ss_pred CEEEEEeCCCHHHHHHHHHH-------HHc---------------CCc----------------CeEEeeecCCCchHHH
Confidence 57999999999999999888 343 433 6677776544433333
Q ss_pred HHHHHHH-HHhCCcEEEEechHHHH
Q 021929 116 MRAKKLA-DEIGSWHLDVSIDTVVS 139 (305)
Q Consensus 116 ~~A~~LA-~~iGi~h~~i~Id~~v~ 139 (305)
+++...+ ......+..+++...+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (188)
T d1k92a1 53 DAIPRRAMEYGAENARLIDCRKQLV 77 (188)
T ss_dssp THHHHHHHHHTCSEEEEEECHHHHH
T ss_pred HHHHHHHHHcccccccccchhhhhh
Confidence 3444433 34445667777655443
No 13
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.07 E-value=5.9e-06 Score=71.36 Aligned_cols=69 Identities=9% Similarity=0.067 Sum_probs=49.8
Q ss_pred CCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcC--CCCCH
Q 021929 35 ASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGS--ENSSQ 112 (305)
Q Consensus 35 ~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t--~nSs~ 112 (305)
.+.++||+|||+||++.+.++. +.. .... +-.+.+++.-. ...|.
T Consensus 13 ~kkvlva~SGG~DS~~Ll~ll~-------~~~--------------~~~~------------~~~l~~~~vdh~~r~~s~ 59 (227)
T d1ni5a1 13 SRQILVAFSGGLDSTVLLHQLV-------QWR--------------TENP------------GVALRAIHVHHGLSANAD 59 (227)
T ss_dssp CSEEEEECCSBHHHHHHHHHHH-------HHH--------------TTST------------TCEEEEEEECCSCCSSHH
T ss_pred CCcEEEEecCcHHHHHHHHHHH-------HHH--------------HhCC------------CceEEEEEeCCCCCcchh
Confidence 3689999999999999998882 331 1110 11367777643 23456
Q ss_pred HHHHHHHHHHHHhCCcEEEEechH
Q 021929 113 ETRMRAKKLADEIGSWHLDVSIDT 136 (305)
Q Consensus 113 et~~~A~~LA~~iGi~h~~i~Id~ 136 (305)
.+.+.++.+|+++|++++...++.
T Consensus 60 ~~~~~~~~~~~~~~i~~~i~~~~~ 83 (227)
T d1ni5a1 60 AWVTHCENVCQQWQVPLVVERVQL 83 (227)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCC
T ss_pred hhHHHHHHHHhhccCcceeeeccc
Confidence 788899999999999999887763
No 14
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.88 E-value=1.8e-05 Score=71.33 Aligned_cols=92 Identities=23% Similarity=0.225 Sum_probs=55.3
Q ss_pred HHHHHhcHHHHHHHHHHHhCCCc--eEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcch
Q 021929 15 EEEIAFGPGCWLWDYLRRSGASG--FLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTES 92 (305)
Q Consensus 15 eeEi~~~~a~~L~DyLrrsg~~g--~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~ 92 (305)
.||+.. -|.+-+++.-.+. +-+-||||+||+++|+++..+...-... ..+..
T Consensus 16 ~eel~~----~l~~sV~~rl~sDvpig~~LSGGlDSs~Iaal~~~~~~~~~~~-----------~~~~~----------- 69 (324)
T d1ct9a1 16 KNELRQ----ALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVED-----------QERSE----------- 69 (324)
T ss_dssp HHHHHH----HHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHHHHC---------------------------------
T ss_pred HHHHHH----HHHHHHHHHhccCCcEEEEecchHHHHHHHHHHHHHHhhcccc-----------ccccc-----------
Confidence 556544 4566666665554 4455999999999999994222100000 00000
Q ss_pred hhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechH
Q 021929 93 REFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDT 136 (305)
Q Consensus 93 ~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~ 136 (305)
-....+.+...+..++ .+...|+.+|+.+|..|+.+.++.
T Consensus 70 --~~~~~~~~~s~~~~~~--~e~~~a~~~a~~~~~~~~~v~~~~ 109 (324)
T d1ct9a1 70 --AWWPQLHSFAVGLPGS--PDLKAAQEVANHLGTVHHEIHFTV 109 (324)
T ss_dssp -------CEEEEEESTTC--HHHHHHHHHHHHHTCEEEEEECCH
T ss_pred --ccCCCcccceeccCCC--chHHHHHHHHhhccccceEEEEec
Confidence 0001356666666544 466789999999999999998875
No 15
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=97.67 E-value=0.00013 Score=58.80 Aligned_cols=80 Identities=15% Similarity=0.098 Sum_probs=55.2
Q ss_pred HHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEE
Q 021929 24 CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTV 103 (305)
Q Consensus 24 ~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~ 103 (305)
.-+++-++.. +.++|++|||-||++++.|+ .+.... ... .+..+
T Consensus 17 ~~ir~~~~~~--d~i~va~SGGKDS~vlL~L~-------~~~~~~------------~~~---------------~~~~v 60 (211)
T d1zuna1 17 HIIREVAAEF--DNPVMLYSIGKDSAVMLHLA-------RKAFFP------------GKL---------------PFPVM 60 (211)
T ss_dssp HHHHHHHHHC--SSEEEECCSSHHHHHHHHHH-------HHHHTT------------SCC---------------SSCEE
T ss_pred HHHHHHHHhc--CCEEEEeCCcHHHHHHHHHH-------Hhhccc------------ccC---------------CeeEE
Confidence 4455545544 57999999999999998877 333110 111 24457
Q ss_pred EEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHH
Q 021929 104 FMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVS 139 (305)
Q Consensus 104 yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~ 139 (305)
+.-+....++|.+.++.+++++|+++....+.....
T Consensus 61 ~~d~~~~~~et~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (211)
T d1zuna1 61 HVDTRWKFQEMYRFRDQMVEEMGLDLITHINPDGVA 96 (211)
T ss_dssp EECCSCCCHHHHHHHHHHHHTTTCCEEEECC-----
T ss_pred EecCcccchhhHHHHHHHHHHhCCceEEeechhHHH
Confidence 777778889999999999999999998887765443
No 16
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]}
Probab=97.05 E-value=0.0015 Score=55.40 Aligned_cols=63 Identities=13% Similarity=0.019 Sum_probs=50.8
Q ss_pred CceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHHH
Q 021929 36 SGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETR 115 (305)
Q Consensus 36 ~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~ 115 (305)
.+++|+.|||.||++++.|+ .+. ..+ +..+|.-|....++|.
T Consensus 45 ~~v~vs~SgGkDS~vllhl~-------~~~---------------~~~----------------~~vvf~DTg~~fpeT~ 86 (215)
T d1sura_ 45 GEYVLSSSFGIQAAVSLHLV-------NQI---------------RPD----------------IPVILTDTGYLFPETY 86 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHH-------HHH---------------STT----------------CEEEEEECSCBCHHHH
T ss_pred CCEEEEecCChHHHHHHHHH-------Hhc---------------CCC----------------ccEEEEECCcCcHHHH
Confidence 57999999999999999888 333 322 4557777777789999
Q ss_pred HHHHHHHHHhCCcEEEEechH
Q 021929 116 MRAKKLADEIGSWHLDVSIDT 136 (305)
Q Consensus 116 ~~A~~LA~~iGi~h~~i~Id~ 136 (305)
+.++++++.+|+..+.+.-+.
T Consensus 87 e~~~~~~~~~~l~~~~~~~~~ 107 (215)
T d1sura_ 87 RFIDELTDKLKLNLKVYRATE 107 (215)
T ss_dssp HHHHHHHHHTTCEEEEEECSS
T ss_pred HHHHHHHHhcCceeeEEeccc
Confidence 999999999999988876543
No 17
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.15 E-value=0.0022 Score=55.82 Aligned_cols=68 Identities=18% Similarity=0.122 Sum_probs=40.5
Q ss_pred CCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCC--
Q 021929 34 GASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSS-- 111 (305)
Q Consensus 34 g~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs-- 111 (305)
|...++|..|||-||+.++..+ .++ |.+- . -+.|++-....|.
T Consensus 2 ~~~~V~vl~SGGKDS~lAl~~a-------~~~---------------G~eV-----------~--~L~t~~~~~~~s~~~ 46 (226)
T d2d13a1 2 GLADVAVLYSGGKDSNYALYWA-------LKS---------------GLRV-----------R--YLVSMVSENEESYMY 46 (226)
T ss_dssp CSCEEEEECCSSHHHHHHHHHH-------HHT---------------TCEE-----------E--EEEEEECCC------
T ss_pred CceeEEEEecCcHHHHHHHHHH-------HHc---------------CCee-----------E--EEEEEecCCCCcCcc
Confidence 6788999999999999988776 333 3320 0 0122211111221
Q ss_pred -HHHHHHHHHHHHHhCCcEEEEechH
Q 021929 112 -QETRMRAKKLADEIGSWHLDVSIDT 136 (305)
Q Consensus 112 -~et~~~A~~LA~~iGi~h~~i~Id~ 136 (305)
.-..+-.+..|+.+|+++..+.+..
T Consensus 47 h~~~~~ll~~qAealgiPl~~~~~~~ 72 (226)
T d2d13a1 47 HTPNVELTSLQARALGIPIIKGFTKG 72 (226)
T ss_dssp ---CCTTHHHHHHHHTCCEEEEEC--
T ss_pred cCCCHHHHHHHHHhcCCCceEEecCC
Confidence 1234567888999999998888754
No 18
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.39 E-value=0.011 Score=47.32 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=36.3
Q ss_pred ceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHHHH
Q 021929 37 GFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRM 116 (305)
Q Consensus 37 g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~~ 116 (305)
++++-||||+ |.++|.++ .+. |.+ ++.+++ +.++++.+
T Consensus 6 k~l~LlSGGi-SpVAa~lm-------mkR---------------G~~----------------V~~v~f---~~~~~~~e 43 (132)
T d1vbka1 6 RMIGILHDEL-SALAIFLM-------MKR---------------GVE----------------VIPVYI---GKDDKNLE 43 (132)
T ss_dssp EEEEECSSHH-HHHHHHHH-------HHB---------------TCE----------------EEEEEE---SCSSHHHH
T ss_pred eEEEeecCCc-hHHHHHHH-------HHC---------------CCE----------------EEEEEE---cCCHHHHH
Confidence 4566689999 99999888 333 433 788888 45678888
Q ss_pred HHHHHHHHhC
Q 021929 117 RAKKLADEIG 126 (305)
Q Consensus 117 ~A~~LA~~iG 126 (305)
.++++++.|.
T Consensus 44 kv~~l~~~L~ 53 (132)
T d1vbka1 44 KVRSLWNLLK 53 (132)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998773
No 19
>d1fsfa_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Escherichia coli [TaxId: 562]}
Probab=53.86 E-value=5.2 Score=33.63 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=31.5
Q ss_pred cccCCcHHHHHhcHHHHHHHHHHHhCC---CceEEeccCchH
Q 021929 9 ITYHSPEEEIAFGPGCWLWDYLRRSGA---SGFLLPLSGGAD 47 (305)
Q Consensus 9 ~~~~~peeEi~~~~a~~L~DyLrrsg~---~g~~LgLSGGiD 47 (305)
+....+.+|+....|..|.+.+++... +.|.|+||||--
T Consensus 3 iii~~~~~e~~~~aA~~i~~~I~~~~~~~~~~f~ialsGGsT 44 (266)
T d1fsfa_ 3 LIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT 44 (266)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSST
T ss_pred EEEeCCHHHHHHHHHHHHHHHHHHhccccCCCEEEEECCCcc
Confidence 456778999999999999999988542 348899999943
No 20
>d1ne7a_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.97 E-value=11 Score=32.08 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=29.5
Q ss_pred cccCCcHHHHHhcHHHHHHHHHHHhCC--Cc-eEEeccCch
Q 021929 9 ITYHSPEEEIAFGPGCWLWDYLRRSGA--SG-FLLPLSGGA 46 (305)
Q Consensus 9 ~~~~~peeEi~~~~a~~L~DyLrrsg~--~g-~~LgLSGGi 46 (305)
+.+..+.+|.+...|..+.+.+.+... ++ |.|+||||-
T Consensus 3 iii~~d~~e~s~~aA~~i~~~I~~~~~~~~~~~~i~lsGGs 43 (281)
T d1ne7a_ 3 LIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGS 43 (281)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSH
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHhccccCCCEEEEECCCc
Confidence 345667889999999999998877543 33 779999993
No 21
>d2gnpa1 c.124.1.8 (A:56-317) Transcriptional regulator SP0247 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=38.78 E-value=39 Score=27.93 Aligned_cols=31 Identities=13% Similarity=-0.070 Sum_probs=24.7
Q ss_pred HHHHHhcHHHHHHHHHHHhCCCceEEeccCc
Q 021929 15 EEEIAFGPGCWLWDYLRRSGASGFLLPLSGG 45 (305)
Q Consensus 15 eeEi~~~~a~~L~DyLrrsg~~g~~LgLSGG 45 (305)
.+++...++..-.+||.+.-..+-+||+|+|
T Consensus 33 ~~~~~~~l~~~aA~~l~~~l~~~~~iGvswG 63 (262)
T d2gnpa1 33 PTILSERISQVAAGVLRNLIDDNMKIGFSWG 63 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCEEEECCS
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 4556677888888888887777889999999
No 22
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=37.63 E-value=26 Score=27.15 Aligned_cols=38 Identities=16% Similarity=0.305 Sum_probs=29.8
Q ss_pred eEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHH
Q 021929 99 IFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSA 140 (305)
Q Consensus 99 ~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a 140 (305)
.+.-+.+|...|.+.|. |+.||+.+|..| |++++++..
T Consensus 6 ~mrIiliG~PGSGKtT~--a~~La~~~g~~~--is~gdllr~ 43 (189)
T d2ak3a1 6 LLRAAIMGAPGSGKGTV--SSRITKHFELKH--LSSGDLLRD 43 (189)
T ss_dssp CCEEEEECCTTSSHHHH--HHHHHHHBCCEE--EEHHHHHHH
T ss_pred ceeEEEECCCCCCHHHH--HHHHHHHHCCeE--EcHHHHHHH
Confidence 45556788888988776 788999999888 577777764
No 23
>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.05 E-value=47 Score=22.89 Aligned_cols=37 Identities=19% Similarity=0.102 Sum_probs=28.0
Q ss_pred EEEEcCCCCCHH---HHHHHHHHHHHhCCcEEEEechHHH
Q 021929 102 TVFMGSENSSQE---TRMRAKKLADEIGSWHLDVSIDTVV 138 (305)
Q Consensus 102 t~yM~t~nSs~e---t~~~A~~LA~~iGi~h~~i~Id~~v 138 (305)
-+|..+...+.+ ..++|+.|-+..|++|..+||+.--
T Consensus 5 ~vy~ts~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~~d~ 44 (93)
T d1t1va_ 5 RVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDN 44 (93)
T ss_dssp EEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCH
T ss_pred EEEEccCcCChhhHHHHHHHHHHHHHCCCceEEEEecCch
Confidence 466665555544 4678999999999999999997643
No 24
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=35.55 E-value=16 Score=26.86 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=26.4
Q ss_pred EEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHH
Q 021929 104 FMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVS 139 (305)
Q Consensus 104 yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~ 139 (305)
..|...|.+.|. |+.||+++|.++..++.|....
T Consensus 9 l~G~~GsGKSTi--a~~La~~lg~~~~~~~~d~~~~ 42 (176)
T d1zp6a1 9 LSGHPGSGKSTI--AEALANLPGVPKVHFHSDDLWG 42 (176)
T ss_dssp EEECTTSCHHHH--HHHHHTCSSSCEEEECTTHHHH
T ss_pred EECCCCCCHHHH--HHHHHHHhCCCEEEecHHHHHH
Confidence 455557888875 7889999999999998876543
No 25
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=33.27 E-value=15 Score=27.81 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=24.1
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHH
Q 021929 103 VFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVS 139 (305)
Q Consensus 103 ~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~ 139 (305)
+.||...|.+.|. |+.||+++|.+|.+ .|..++
T Consensus 6 il~G~~GsGKSTi--a~~LA~~Lg~~~id--~D~~ie 38 (170)
T d1e6ca_ 6 FMVGARGCGMTTV--GRELARALGYEFVD--TDIFMQ 38 (170)
T ss_dssp EEESCTTSSHHHH--HHHHHHHHTCEEEE--HHHHHH
T ss_pred EEECCCCCCHHHH--HHHHHHHhCCCEEe--hhhhhh
Confidence 3578878887664 78899999999864 555443
No 26
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=32.93 E-value=33 Score=25.39 Aligned_cols=34 Identities=29% Similarity=0.425 Sum_probs=26.0
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHH
Q 021929 103 VFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSA 140 (305)
Q Consensus 103 ~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a 140 (305)
+.+|...|.+.|. |+.||+++|..|. +.++++..
T Consensus 4 ~i~G~pGSGKsT~--a~~La~~~~~~~i--~~~~ll~~ 37 (182)
T d1zina1 4 VLMGLPGAGKGTQ--AEKIVAAYGIPHI--STGDMFRA 37 (182)
T ss_dssp EEECSTTSSHHHH--HHHHHHHHCCCEE--EHHHHHHH
T ss_pred EEECCCCCCHHHH--HHHHHHHHCCcee--chhHHHHH
Confidence 4678888888885 6789999999985 45666554
No 27
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]}
Probab=30.99 E-value=42 Score=27.97 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=20.9
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHhCCcEEEE
Q 021929 103 VFMGSENSSQETRMRAKKLADEIGSWHLDV 132 (305)
Q Consensus 103 ~yM~t~nSs~et~~~A~~LA~~iGi~h~~i 132 (305)
+++|...+...+-.-.-.||+.||++|...
T Consensus 117 Il~G~~s~D~~tgqvg~~lAe~Lg~P~vt~ 146 (246)
T d1efpb_ 117 IIAGKQAIDNDMNATGQMLAAILGWAQATF 146 (246)
T ss_dssp EEEESCCTTTCCCCHHHHHHHHHTCEEEEE
T ss_pred EEEEeeeccccccchhHHHHHHhhccceeE
Confidence 455554444456677888999999998554
No 28
>d1gpua3 c.48.1.1 (A:535-680) Transketolase (TK), C-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.09 E-value=1.1e+02 Score=23.19 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=24.6
Q ss_pred cChHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHhhh
Q 021929 181 CGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINR 218 (305)
Q Consensus 181 ~gP~~mf~~l~~~w~~~~s~~eia~kVk~ff~~~~~Nr 218 (305)
.||+. .|...| +++++.|+++|+++..++..++
T Consensus 105 Sg~~~---~L~~~f--Glt~~~I~~~v~~~L~~~k~~~ 137 (146)
T d1gpua3 105 SGKAP---EVFKFF--GFTPEGVAERAQKTIAFYKGDK 137 (146)
T ss_dssp CSCHH---HHHHHT--TCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCHH---HHHHHh--CCCHHHHHHHHHHHHHHhcCCC
Confidence 35544 344445 6999999999999998887764
No 29
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=27.39 E-value=58 Score=24.42 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=27.9
Q ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHH
Q 021929 100 FYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSA 140 (305)
Q Consensus 100 l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a 140 (305)
..-+.+|...|.+.|. |+.||+.+|..|. +.++++..
T Consensus 7 ~iI~i~G~pGSGKsT~--a~~La~~~g~~~i--~~g~~~r~ 43 (194)
T d1qf9a_ 7 NVVFVLGGPGSGKGTQ--CANIVRDFGWVHL--SAGDLLRQ 43 (194)
T ss_dssp EEEEEEESTTSSHHHH--HHHHHHHHCCEEE--EHHHHHHH
T ss_pred cEEEEECCCCCCHHHH--HHHHHHHHCCceE--chhhHHHH
Confidence 3447788888988875 7999999999874 56666654
No 30
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}
Probab=26.45 E-value=26 Score=28.24 Aligned_cols=27 Identities=15% Similarity=0.142 Sum_probs=17.4
Q ss_pred HHHhcHHHHHHHHHHHhCCCceEEeccCc
Q 021929 17 EIAFGPGCWLWDYLRRSGASGFLLPLSGG 45 (305)
Q Consensus 17 Ei~~~~a~~L~DyLrrsg~~g~~LgLSGG 45 (305)
.++..++..|.+-+... +.+.|+||||
T Consensus 14 ~~a~~i~~~~~~~~~~~--~~~~i~lsGG 40 (218)
T d1vl1a_ 14 FVVEKIRTKMEKLLEEK--DKIFVVLAGG 40 (218)
T ss_dssp HHHHHHHHHHHHHHHHC--SCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHhC--CCEEEEECCC
Confidence 34555555555555544 4688999999
No 31
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=24.05 E-value=1.5e+02 Score=23.87 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=17.4
Q ss_pred HHHHHHHhCCCceEEeccCchHHHHH
Q 021929 26 LWDYLRRSGASGFLLPLSGGADSSSV 51 (305)
Q Consensus 26 L~DyLrrsg~~g~~LgLSGGiDSs~t 51 (305)
+.+|+-..|.+|++++=|-|==.+++
T Consensus 29 ~i~~l~~~Gv~gl~~~G~tGE~~~Ls 54 (292)
T d1xkya1 29 LVNYLIDNGTTAIVVGGTTGESPTLT 54 (292)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSC
T ss_pred HHHHHHHCCCCEEEECeEccchhhCC
Confidence 33677789999999975555444333
No 32
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=22.77 E-value=51 Score=25.14 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=27.0
Q ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHH
Q 021929 98 RIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFL 142 (305)
Q Consensus 98 ~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~ 142 (305)
+++.|+ .|...|.+.| -|+.||+++|.+| ++--.++.++.
T Consensus 3 ~i~IaI-dGp~GsGKgT--~ak~La~~lg~~~--istGdl~R~~a 42 (223)
T d1q3ta_ 3 TIQIAI-DGPASSGKST--VAKIIAKDFGFTY--LDTGAMYRAAT 42 (223)
T ss_dssp CCEEEE-ECSSCSSHHH--HHHHHHHHHCCEE--EEHHHHHHHHH
T ss_pred ceEEEE-ECCCCCCHHH--HHHHHHHHhCCcE--ECHHHHHHHHH
Confidence 345554 4555677665 5789999999998 44455666544
No 33
>d1itza3 c.48.1.1 (A:540-675) Transketolase (TK), C-domain {Maize (Zea mays) [TaxId: 4577]}
Probab=21.54 E-value=82 Score=23.14 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=19.1
Q ss_pred cChHHHHHHHHHhhCCCCCHHHHHHHHHHH
Q 021929 181 CGPVSMFKNLCYRWGARLTPSEVAEKVKHF 210 (305)
Q Consensus 181 ~gP~~mf~~l~~~w~~~~s~~eia~kVk~f 210 (305)
.|-..=...|...| +++++.|+++||.|
T Consensus 109 FG~Sg~~~~L~~~f--glt~~~Iv~~~ks~ 136 (136)
T d1itza3 109 FGASAPAGTIYKEY--GITVESIIAAAKSF 136 (136)
T ss_dssp CCCSSCHHHHHHHH--TCSHHHHHHHHTTC
T ss_pred ccCCCCHHHHHHHh--CCCHHHHHHHHHcC
Confidence 33333345566666 69999999999865
No 34
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=20.99 E-value=1.1e+02 Score=24.22 Aligned_cols=38 Identities=11% Similarity=0.018 Sum_probs=24.4
Q ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEech
Q 021929 97 KRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSID 135 (305)
Q Consensus 97 ~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id 135 (305)
++.+.-++.-+........+.|++|.++ +.........
T Consensus 41 G~~i~lv~~D~~~~p~~a~~~~~~li~~-~~~~vig~~~ 78 (346)
T d1usga_ 41 GDKLVGVEYDDACDPKQAVAVANKIVND-GIKYVIGHLC 78 (346)
T ss_dssp TBCEEEEEEECTTCHHHHHHHHHHHHHT-TCCEEECCSS
T ss_pred CcEEEEEEecCCCCHHHHHHHHHHHHhc-CCccccCCcc
Confidence 3446667777766667777788888764 5555555443
Done!