BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021931
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0VMF9|RS6_ALCBS 30S ribosomal protein S6 OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=rpsF PE=3 SV=1
Length = 113
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYEVV+L+H E V ++ E+ + + KG + R+ DWG R+LAY I K KAHY++
Sbjct: 2 RHYEVVFLVHPDQSEQVSAMVERYSAIVTDGKGTIHRVEDWGRRQLAYPINKIHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
+N E + + + + + ++ VIRHLVI+RD AITE P
Sbjct: 62 LNIECDGETLGELENTFRFNDAVIRHLVIRRDNAITEPSP 101
>sp|Q82XQ6|RS6_NITEU 30S ribosomal protein S6 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rpsF PE=3 SV=1
Length = 146
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 63/100 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + + G++ RL DWG R+L Y IQK KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVSAMTERYSNIVTGRSGKIHRLEDWGRRQLTYPIQKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + +N+ + ++ ++RHLVI+ + IT P
Sbjct: 62 MNIECDQESLNELEHSFKFNDAILRHLVIRMNGPITTPSP 101
>sp|Q0ADI6|RS6_NITEC 30S ribosomal protein S6 OS=Nitrosomonas eutropha (strain C91)
GN=rpsF PE=3 SV=1
Length = 144
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 22/164 (13%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++++H E V ++ E+ + + E+ G + RL DWG R+L Y IQK KAHYIL
Sbjct: 2 RHYEIIFIVHPDQSEQVSAMIERYSNMITERSGGIHRLEDWGRRQLTYPIQKLHKAHYIL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCPPPPEFHTLRAEMHGYDEEED 237
MN E + + +N+ + ++ ++RHLVI+ + +T P
Sbjct: 62 MNIECDQESLNELEHSFKFNDAILRHLVIRMNGPVTTPSP-------------------- 101
Query: 238 DIDYDDEEYDDEYDDGEGDEMDDNVDDDFEHGFSIVNVDDNEGE 281
+ DD+ DE G NV DD G +V ++N+ +
Sbjct: 102 -MMQDDKSKPDENSRGTAAP-TVNVADDSASGAQVVAAEENDTQ 143
>sp|O07813|RS6_NEIGO 30S ribosomal protein S6 OS=Neisseria gonorrhoeae GN=rpsF PE=3 SV=1
Length = 122
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + E G++ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + +T ++ V+RHL IK A+TE P
Sbjct: 62 MNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASP 101
>sp|Q5F925|RS6_NEIG1 30S ribosomal protein S6 OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=rpsF PE=3 SV=1
Length = 122
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + E G++ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + +T ++ V+RHL IK A+TE P
Sbjct: 62 MNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASP 101
>sp|Q7NRY7|RS6_CHRVO 30S ribosomal protein S6 OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=rpsF PE=3 SV=1
Length = 124
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 66/100 (66%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + +G++ RL DWG R+LAY IQK KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMIERYKGMVLAAEGKIHRLEDWGRRQLAYPIQKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E +A+ + + + ++ V+RHL IK D+AI++ P
Sbjct: 62 MNVECQAETLAEIEHAFKFNDAVLRHLTIKMDRAISDASP 101
>sp|A1KUF0|RS6_NEIMF 30S ribosomal protein S6 OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=rpsF PE=3
SV=1
Length = 122
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + E G++ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + +T ++ V+RHL IK A+TE P
Sbjct: 62 MNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASP 101
>sp|Q9JU24|RS6_NEIMA 30S ribosomal protein S6 OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=rpsF PE=3 SV=1
Length = 122
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + E G++ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + +T ++ V+RHL IK A+TE P
Sbjct: 62 MNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASP 101
>sp|A9LZQ3|RS6_NEIM0 30S ribosomal protein S6 OS=Neisseria meningitidis serogroup C
(strain 053442) GN=rpsF PE=3 SV=1
Length = 122
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + E G++ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + +T ++ V+RHL IK A+TE P
Sbjct: 62 MNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASP 101
>sp|Q5P2M5|RS6_AROAE 30S ribosomal protein S6 OS=Aromatoleum aromaticum (strain EbN1)
GN=rpsF PE=3 SV=1
Length = 128
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYEVV+++H E V ++ E+ + + + G++ RL DWG R++AY IQK KAHY+L
Sbjct: 2 RHYEVVFIVHPDQSEQVPAMIERYKAIVTARNGQIHRLEDWGRRQMAYPIQKVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + + + ++ V+RHLV+K A+T P
Sbjct: 62 MNIECDGEALGELEHAFKFNDAVLRHLVVKTKAAVTTPSP 101
>sp|Q9JZ29|RS6_NEIMB 30S ribosomal protein S6 OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rpsF PE=3 SV=1
Length = 122
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + E G++ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + +T ++ ++RHL IK A+TE P
Sbjct: 62 MNIETTPEVVEELETAFRFNDAILRHLTIKTKHAVTEASP 101
>sp|Q9HUM9|RS6_PSEAE 30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rpsF PE=3
SV=1
Length = 139
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
MN E AK + + + ++ VIR+LV++RD+A+TE
Sbjct: 62 MNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE 98
>sp|Q02F83|RS6_PSEAB 30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=rpsF PE=3 SV=1
Length = 139
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
MN E AK + + + ++ VIR+LV++RD+A+TE
Sbjct: 62 MNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE 98
>sp|B7V1Z8|RS6_PSEA8 30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain LESB58)
GN=rpsF PE=3 SV=1
Length = 139
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
MN E AK + + + ++ VIR+LV++RD+A+TE
Sbjct: 62 MNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE 98
>sp|A6VD48|RS6_PSEA7 30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain PA7)
GN=rpsF PE=3 SV=1
Length = 139
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
MN E AK + + + ++ VIR+LV++RD+A+TE
Sbjct: 62 MNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE 98
>sp|B6J6T7|RS6_COXB1 30S ribosomal protein S6 OS=Coxiella burnetii (strain CbuK_Q154)
GN=rpsF PE=3 SV=1
Length = 127
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V L+H V ++ E+ Q ++EK G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVILVHPDQSSQVPAMVERYQSMIKEKGGKVHRLEDWGRRQLAYSIDKVHKAHYLL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDC 216
MN E + I++ + ++ VIR L++KRD AIT+
Sbjct: 62 MNIESDQGVISELENAFRYNDAVIRSLILKRDHAITQSS 100
>sp|Q3JEJ6|RS6_NITOC 30S ribosomal protein S6 OS=Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848) GN=rpsF PE=3 SV=1
Length = 156
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYEVV+L+H E + ++ ++ + + G + RL DWG R+LAY IQK KAHY+L
Sbjct: 2 RHYEVVFLVHPDQSEQLSAMMDRYRQIIETDGGCIHRLEDWGRRQLAYPIQKLYKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + I + + ++ V+R +VI+R++AITE P
Sbjct: 62 MNIECTPRTIEELTSAFRFNDAVLRDMVIRREEAITETSP 101
>sp|A1K3D0|RS6_AZOSB 30S ribosomal protein S6 OS=Azoarcus sp. (strain BH72) GN=rpsF PE=3
SV=1
Length = 127
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ ++ + + + G++ RL DWG R+LAY IQK KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMIDRYKSIVTARNGQIHRLEDWGRRQLAYPIQKVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + + + ++ V+RHL IK KA+T P
Sbjct: 62 MNIECDGEALGELEHAFKFNDAVLRHLTIKMKKAVTTPSP 101
>sp|A4VQN0|RS6_PSEU5 30S ribosomal protein S6 OS=Pseudomonas stutzeri (strain A1501)
GN=rpsF PE=3 SV=1
Length = 138
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY++
Sbjct: 2 RHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
+N E K + + + ++ VIR+L+I+RD+A+TE
Sbjct: 62 LNVECSGKALAELEDNFRYNDAVIRNLIIRRDEAVTE 98
>sp|C1DCR4|RS6_LARHH 30S ribosomal protein S6 OS=Laribacter hongkongensis (strain HLHK9)
GN=rpsF PE=3 SV=1
Length = 125
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + + G++ RL DWG R+LAY IQK KAHY++
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMVERYKGMVLGQNGKIHRLEDWGRRQLAYPIQKIHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + + ++ V+RHL IK D+A+TE P
Sbjct: 62 MNIECGKETLEEIEHAFKFNDAVLRHLTIKMDRAVTEASP 101
>sp|Q3SH31|RS6_THIDA 30S ribosomal protein S6 OS=Thiobacillus denitrificans (strain ATCC
25259) GN=rpsF PE=3 SV=1
Length = 127
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + + G V RL DWG R++AY IQK KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMIERYRANIAARGGNVHRLEDWGRRQMAYPIQKVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + + + + ++ V+RHL IKRD A+T P
Sbjct: 62 MNIECDQETLEELEHGFKFNDAVLRHLTIKRDAAVTAASP 101
>sp|A9KFL5|RS6_COXBN 30S ribosomal protein S6 OS=Coxiella burnetii (strain Dugway
5J108-111) GN=rpsF PE=3 SV=1
Length = 126
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V L+H V ++ E+ Q ++EK G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVILVHPDQSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHYLL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDC 216
MN E + I++ + ++ VIR L++KRD AIT+
Sbjct: 62 MNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSS 100
>sp|Q83D76|RS6_COXBU 30S ribosomal protein S6 OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=rpsF PE=3 SV=1
Length = 127
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V L+H V ++ E+ Q ++EK G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVILVHPDQSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHYLL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDC 216
MN E + I++ + ++ VIR L++KRD AIT+
Sbjct: 62 MNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSS 100
>sp|A9ND53|RS6_COXBR 30S ribosomal protein S6 OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=rpsF PE=3 SV=1
Length = 127
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V L+H V ++ E+ Q ++EK G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVILVHPDQSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHYLL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDC 216
MN E + I++ + ++ VIR L++KRD AIT+
Sbjct: 62 MNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSS 100
>sp|B6J0J6|RS6_COXB2 30S ribosomal protein S6 OS=Coxiella burnetii (strain CbuG_Q212)
GN=rpsF PE=3 SV=1
Length = 127
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V L+H V ++ E+ Q ++EK G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVILVHPDQSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHYLL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDC 216
MN E + I++ + ++ VIR L++KRD AIT+
Sbjct: 62 MNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSS 100
>sp|Q1H1P3|RS6_METFK 30S ribosomal protein S6 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rpsF PE=3 SV=1
Length = 131
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + + G + RL DWG R+LAY IQK KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVPAMIERYRTLVTSNGGTIHRLEDWGRRQLAYPIQKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E+ + +N+ + ++ V+RHL + D+A+T P
Sbjct: 62 MNIEVSQEVLNELEHAFKFNDAVLRHLTLNTDEAVTAPSP 101
>sp|A5U9U8|RS6_HAEIE 30S ribosomal protein S6 OS=Haemophilus influenzae (strain PittEE)
GN=rpsF PE=3 SV=1
Length = 125
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ ++E G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E+ + I++ +T ++ V+R LVI A+TE P
Sbjct: 62 MNVEVPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASP 101
>sp|C1DLR2|RS6_AZOVD 30S ribosomal protein S6 OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=rpsF PE=3 SV=1
Length = 136
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 62/96 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY+L
Sbjct: 2 RHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAIT 213
+N E K +++ + ++ VIR+LVI+RD+AIT
Sbjct: 62 INVECSGKALSELEDNFRYNDAVIRNLVIRRDEAIT 97
>sp|Q8EAH2|RS6_SHEON 30S ribosomal protein S6 OS=Shewanella oneidensis (strain MR-1)
GN=rpsF PE=3 SV=1
Length = 131
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + E G++ RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGAITEANGKIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ I + +T ++ V+R++V++ AITE P
Sbjct: 62 MNVEAPAETIEELETAFRFNDAVLRNMVMRTKGAITEASP 101
>sp|Q2Y7M5|RS6_NITMU 30S ribosomal protein S6 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rpsF PE=3 SV=1
Length = 125
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 65/100 (65%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ ++ + + G+V RL DWG R+LAY IQK KAHY+L
Sbjct: 2 RHYEIVFIVHPDQSEQVSAMIERYRNIVTARNGQVHRLEDWGRRQLAYLIQKVHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + + +++ + ++ ++RHL +K D+ +T P
Sbjct: 62 MNIECDQETLDELEHAFKFNDAILRHLTLKMDEPVTAPSP 101
>sp|A6W0Y9|RS6_MARMS 30S ribosomal protein S6 OS=Marinomonas sp. (strain MWYL1) GN=rpsF
PE=3 SV=1
Length = 134
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E V ++ E+ + + E G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVPAMVERYTNLITEDGGQVHRLEDWGRRQLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E +++ ++ +IR+LVI+R +A+T+ P
Sbjct: 62 MNIECSDSVLSELNDTFRYNDAIIRNLVIRRKEAVTDVSP 101
>sp|Q0AB51|RS6_ALHEH 30S ribosomal protein S6 OS=Alkalilimnicola ehrlichei (strain
MLHE-1) GN=rpsF PE=3 SV=1
Length = 119
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 64/100 (64%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V S+ E+ + G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPSMIERYTGIVESNGGKVHRLEDWGRRQLAYPINKLIKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E +++ +++ ++ VIR++V+ RD+A+TE P
Sbjct: 62 MNVECGKDELDELESLFRFNDAVIRNMVLGRDEAVTEPSP 101
>sp|A5EXN1|RS6_DICNV 30S ribosomal protein S6 OS=Dichelobacter nodosus (strain VCS1703A)
GN=rpsF PE=3 SV=1
Length = 108
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 66/97 (68%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E V ++ E+ + + +G+V RL DWG R LAY IQK KAHYIL
Sbjct: 2 RHYEIVFLVHPDQSEQVSAMVERYRAQIEAAQGKVHRLEDWGRRVLAYPIQKLVKAHYIL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
MN E + + + + ++ ++ ++RH++I+RD+A+TE
Sbjct: 62 MNIECDRQTLAELESNFRFNDAILRHMIIRRDEAVTE 98
>sp|Q0HYW6|RS6_SHESR 30S ribosomal protein S6 OS=Shewanella sp. (strain MR-7) GN=rpsF
PE=3 SV=1
Length = 131
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + E G++ RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGVITEANGKIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ I + +T ++ V+R++V++ A+TE P
Sbjct: 62 MNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP 101
>sp|Q0HF39|RS6_SHESM 30S ribosomal protein S6 OS=Shewanella sp. (strain MR-4) GN=rpsF
PE=3 SV=1
Length = 131
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + E G++ RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGVITEANGKIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ I + +T ++ V+R++V++ A+TE P
Sbjct: 62 MNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP 101
>sp|P44375|RS6_HAEIN 30S ribosomal protein S6 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rpsF PE=3 SV=1
Length = 125
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ ++E G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + I++ +T ++ V+R LVI A+TE P
Sbjct: 62 MNVEAPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASP 101
>sp|A5UH52|RS6_HAEIG 30S ribosomal protein S6 OS=Haemophilus influenzae (strain PittGG)
GN=rpsF PE=3 SV=1
Length = 125
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ ++E G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + I++ +T ++ V+R LVI A+TE P
Sbjct: 62 MNVEAPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASP 101
>sp|Q4QN01|RS6_HAEI8 30S ribosomal protein S6 OS=Haemophilus influenzae (strain
86-028NP) GN=rpsF PE=3 SV=1
Length = 125
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ ++E G+V RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPINKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + I++ +T ++ V+R LVI A+TE P
Sbjct: 62 MNVEAPQQVIDELETTFRYNDAVLRSLVIHTKHAVTEASP 101
>sp|A8FR95|RS6_SHESH 30S ribosomal protein S6 OS=Shewanella sediminis (strain HAW-EB3)
GN=rpsF PE=3 SV=1
Length = 139
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E V + E+ L + G+V RL DWG R+LAY I + KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVPGMIERYTGILTQAGGQVHRLEDWGRRQLAYPIIELHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ + + +T ++ V+R +V++ AITE P
Sbjct: 62 MNVEASAESVEELETAFRFNDAVLRSMVMRTKAAITEASP 101
>sp|A0KT20|RS6_SHESA 30S ribosomal protein S6 OS=Shewanella sp. (strain ANA-3) GN=rpsF
PE=3 SV=1
Length = 131
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + E G++ RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGAITEANGKIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ I + +T ++ V+R++V++ A+TE P
Sbjct: 62 MNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP 101
>sp|A1SA60|RS6_SHEAM 30S ribosomal protein S6 OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=rpsF PE=3 SV=1
Length = 135
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + + G++ RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVAGMIERYTGVITDANGKIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ + + +T ++ V+R +V++ AITE P
Sbjct: 62 MNVEATAESVEELETAFRFNDAVLRSMVMRTKGAITEASP 101
>sp|B1KHZ0|RS6_SHEWM 30S ribosomal protein S6 OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=rpsF PE=3 SV=1
Length = 139
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+L+H E V + E+ L + G++ RL DWG R+LAY I + KAHY+L
Sbjct: 2 RHYEIVFLVHPDQSEQVPGMIERYTGILTQAGGQIHRLEDWGRRQLAYPIIELHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ + + +T ++ V+R++V++ AITE P
Sbjct: 62 MNVEATAESVEELETAFRFNDAVLRNMVMRTKAAITEASP 101
>sp|A1RNI9|RS6_SHESW 30S ribosomal protein S6 OS=Shewanella sp. (strain W3-18-1) GN=rpsF
PE=3 SV=1
Length = 131
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + E G + RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGVITEANGTIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ I + +T ++ V+R++V++ A+TE P
Sbjct: 62 MNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP 101
>sp|A4Y3F0|RS6_SHEPC 30S ribosomal protein S6 OS=Shewanella putrefaciens (strain CN-32 /
ATCC BAA-453) GN=rpsF PE=3 SV=1
Length = 131
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V + E+ + E G + RL DWG R+LAY IQ KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPGMIERYTGVITEANGTIHRLEDWGRRQLAYPIQDLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E A+ I + +T ++ V+R++V++ A+TE P
Sbjct: 62 MNVEAPAETIEELETAFRFNDAVLRNMVMRTKVAVTEASP 101
>sp|Q606H8|RS6_METCA 30S ribosomal protein S6 OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=rpsF PE=3 SV=2
Length = 136
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H V ++ E+ + + GR+ RL DWG R+LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSGQVPAMIERYRSIIEGAAGRIHRLEDWGRRQLAYPIAKLHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITE 214
MN E + + + ++ ++ V+R L I+RD+A+TE
Sbjct: 62 MNIECDQATLEELESGFRFNDAVLRSLTIRRDEAVTE 98
>sp|Q4ZYX1|RS6_PSEU2 30S ribosomal protein S6 OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=rpsF PE=3 SV=1
Length = 141
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY++
Sbjct: 2 RHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAIT 213
+N E K + + + ++ VIR+LVI+RD+A+T
Sbjct: 62 LNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVT 97
>sp|Q87VK3|RS6_PSESM 30S ribosomal protein S6 OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=rpsF PE=3 SV=1
Length = 141
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY++
Sbjct: 2 RHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAIT 213
+N E K + + + ++ VIR+LVI+RD+A+T
Sbjct: 62 LNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVT 97
>sp|Q48NZ3|RS6_PSE14 30S ribosomal protein S6 OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=rpsF PE=1 SV=1
Length = 141
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY++
Sbjct: 2 RHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAIT 213
+N E K + + + ++ VIR+LVI+RD+A+T
Sbjct: 62 LNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVT 97
>sp|Q1QZ63|RS6_CHRSD 30S ribosomal protein S6 OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=rpsF PE=3 SV=1
Length = 135
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+V+++H E V ++ E+ + E G V RL DWG R LAY I K KAHY+L
Sbjct: 2 RHYEIVFMVHPDQSEQVPAMVERYTGLVTENGGTVHRLEDWGRRHLAYPINKIHKAHYVL 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAITEDCP 217
MN E + +++ + + ++ +IR LV++ +AITE P
Sbjct: 62 MNIECSGETLDEIENIFRFNDAIIRSLVVRCKEAITEASP 101
>sp|Q1I461|RS6_PSEE4 30S ribosomal protein S6 OS=Pseudomonas entomophila (strain L48)
GN=rpsF PE=3 SV=1
Length = 141
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%)
Query: 118 RHYEVVYLIHEKYEEDVGSVNEKVQDFLREKKGRVWRLNDWGLRRLAYKIQKAKKAHYIL 177
RHYE+++L+H E VG + E+ + E G++ RL DWG R+LAY I KAHY++
Sbjct: 2 RHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVM 61
Query: 178 MNFELEAKWINDFKTMLDKDEKVIRHLVIKRDKAIT 213
+N E K + + + ++ VIR+LVI+RD+A+T
Sbjct: 62 LNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVT 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,376,672
Number of Sequences: 539616
Number of extensions: 6322493
Number of successful extensions: 69193
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 764
Number of HSP's that attempted gapping in prelim test: 48207
Number of HSP's gapped (non-prelim): 12304
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)