BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021933
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 115/246 (46%), Gaps = 67/246 (27%)
Query: 35 LSARKWQAAFTPEGQLDIGKTLS-RIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIR 93
+S +W + PEG+L +++ +I RGG+ S+R + W+FLLG + ST +ER +++
Sbjct: 300 VSLEEWNKSLDPEGRLVAVESMKQKIFRGGLSHSLRKQAWKFLLGYFPWDSTKEERTQLQ 359
Query: 94 Q-------RRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGIS 146
+ R +LQ WK +S
Sbjct: 360 KQKTDEYFRMKLQ---WK---------------------------------------SVS 377
Query: 147 ASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQEN--LSKLWDILA 204
+ K L + L +K DV RTDRT FYE Q+N L L DIL
Sbjct: 378 EAQEKRNSRLRDYRSLIEK-------------DVNRTDRTNKFYEGQDNPGLILLHDILM 424
Query: 205 VYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQL 264
Y D D+GY QGMSDL SP++ ++ENE DAFWCF M ++ NF E G++TQL
Sbjct: 425 TYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE--EQMQGMKTQL 482
Query: 265 SNLASI 270
L+++
Sbjct: 483 IQLSTL 488
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 110/239 (46%), Gaps = 53/239 (22%)
Query: 35 LSARKWQAAFTPEGQ-LDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEIR 93
+S +W EG+ L++ I RGG+ ++R + W+FLLG + ST +ER +++
Sbjct: 317 VSLEEWTKNIDSEGRILNVDNMKQMIFRGGLSHALRKQAWKFLLGYFPWDSTKEERTQLQ 376
Query: 94 QRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMV 153
+++ +Y K + IS K
Sbjct: 377 KQKTDEYFRMKLQW-----------------------------------KSISQEQEKRN 401
Query: 154 KELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDR 211
L + L +K DV RTDRT FYE Q+N L L DIL Y D
Sbjct: 402 SRLRDYRSLIEK-------------DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDF 448
Query: 212 DVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASI 270
D+GY QGMSDL SP++ ++ENE DAFWCF M ++ NF E G++TQL L+++
Sbjct: 449 DLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTL 505
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 51/236 (21%)
Query: 26 RFKIKPGKTLSARKWQAAFTPEGQLD-IGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKS 84
R ++ G ++ +W PEG+L + + +RI GG+ PS+R E W+FLLG +
Sbjct: 272 RPTVERGPPVTEEEWARHVGPEGRLQQVPELKNRIFSGGLSPSLRREAWKFLLGYLSWEG 331
Query: 85 TFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSG 144
T +E + +++ +Y K + + P QE +
Sbjct: 332 TAEEHKAHIRKKTDEYFRMKLQWKSVSPE-------------------------QERRNS 366
Query: 145 ISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQEN--LSKLWDI 202
+ +++ DV RTDRT FYE EN L L DI
Sbjct: 367 LLHGYRSLIER-----------------------DVSRTDRTNKFYEGPENPGLGLLNDI 403
Query: 203 LAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSV 258
L Y D+GY QGMSDL SP++ +++NE DAFWCF M ++GNF ++ ++
Sbjct: 404 LLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDAFWCFCGFMELVQGNFEESQETM 459
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 51/236 (21%)
Query: 26 RFKIKPGKTLSARKWQAAFTPEGQL-DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKS 84
R ++ ++ +W PEG+L ++ + +RI GG+ P +R E W+FLLG +S
Sbjct: 272 RPTVERAPPVTEEEWNRYVGPEGRLQNVPELKNRIFSGGLSPGLRREAWKFLLGYLSWES 331
Query: 85 TFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSG 144
+ +E + +++ +Y K +
Sbjct: 332 SAEEHKAHVRKKTDEYFRMKLQWK------------------------------------ 355
Query: 145 ISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQEN--LSKLWDI 202
S S+ + + L HG + +I+ DV RTDRT FYE EN LS L DI
Sbjct: 356 -SVSAEQERRNSLLHG--YRSLIE---------RDVSRTDRTNKFYEGPENPGLSLLHDI 403
Query: 203 LAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSV 258
L Y D+GY QGMSDL SP++ +++NE DAFWCF M + GNF ++ ++
Sbjct: 404 LLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFEESQETM 459
>sp|A1A5B6|TBC25_MOUSE TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=1 SV=1
Length = 742
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 99/228 (43%), Gaps = 58/228 (25%)
Query: 29 IKPGKT-LSARKWQAAFTPEGQLDIGKTLS-RIHRGGIHPSIRGEVWEFLLGCYEPKSTF 86
+KP K LS ++ EGQL + L RI+ GG+ PS+R VW +LL Y T
Sbjct: 246 VKPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTG 305
Query: 87 DEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGIS 146
ER + +R+ +Y K E Q V ED + I+
Sbjct: 306 RERMDYMKRKSREYEQLKSEWAQR-------------VNPEDLEFIR------------- 339
Query: 147 ASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQEN---LSKLWDIL 203
S ++K++L RTDR +Y E+ L L D+L
Sbjct: 340 ---STVLKDVL------------------------RTDRAHPYYAGPEDGPHLRALHDLL 372
Query: 204 AVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNF 251
YA V YCQGMSDL SP++ ++++E AF CF +M+RL NF
Sbjct: 373 TTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANF 420
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 53/216 (24%)
Query: 33 KTLSARKWQAAFTPEGQLDIGKTLSR-IHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREE 91
K L W GQ++ L + I GGI SIRGEVW FLL Y +ST +ERE
Sbjct: 394 KRLGVSAWLNHLNELGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREA 453
Query: 92 IRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSK 151
+R ++R +YS +
Sbjct: 454 LRLQKRKEYS-------------------------------------------------E 464
Query: 152 MVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFY--EKQENLSKLWDILAVYAWV 209
+ ++ LS P + + W + DV+RTDR F+ E N+ + IL YA
Sbjct: 465 IQQKRLSMTPEEHRAF-WRNVQFTVDKDVVRTDRNNQFFRGEDNPNVESMRRILLNYAVY 523
Query: 210 DRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMR 245
+ VGY QGMSDL +P++ + +E+D FWCF LM+
Sbjct: 524 NPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQ 559
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 171 LTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
L LH+I DV R DR +Y NL +L DI+ Y W D+GY QGM DL +P++++L
Sbjct: 791 LNLHRIDKDVQRCDRNY-WYFTTSNLERLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVIL 849
Query: 231 ENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQ 272
+N+ A+ CF LM+R+ NF S +++ +N+ S+ Q
Sbjct: 850 DNDQLAYSCFSHLMKRMGQNF---PSGGAMDSHFANMRSLIQ 888
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 56 LSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEI 92
L +++ GG+ IR +VW FLLG Y+ + E E++
Sbjct: 559 LRQVYYGGVEHEIRKDVWPFLLGHYKFGMSKKEMEQV 595
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 171 LTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
L LH+I DV R DR +Y NL +L D++ Y W DVGY QGM DL +P+++ L
Sbjct: 792 LNLHRIDKDVQRCDRNY-WYFTPPNLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTL 850
Query: 231 ENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQ 272
+N+ A+ CF LM+R+ NF + ++T +N+ S+ Q
Sbjct: 851 DNDQLAYSCFSHLMKRMSQNF---PNGGAMDTHFANMRSLIQ 889
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 56 LSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEI 92
L +++ GGI IR +VW FLLG Y+ + E E++
Sbjct: 559 LRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQV 595
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 77/265 (29%)
Query: 35 LSARKWQAAFTPEGQLDI--GKTLSRIHRGGI-HPSIRGEVWEFLLGCYEPKSTFDEREE 91
++ +KW + F EG+L + + I GG+ + R EVW FLLG Y S+ DER
Sbjct: 360 MTKQKWNSLFDSEGRLTVTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSEDER-- 417
Query: 92 IRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPLVLQETNSGISASSSK 151
+Q R+ + + E ++ V +E N
Sbjct: 418 -KQLRKALHDEYME--------------------------LKQKWVDREVN--------- 441
Query: 152 MVKELLSHGPLDKKVIQ-WMLTLHQIGLDVIRTDRTLVFYE------------------- 191
LD + W L +I DV R DR + Y+
Sbjct: 442 ----------LDNDEEEYWKDQLFRIEKDVKRNDRNIDIYKYNTSDNLPFPEDTAPTTDD 491
Query: 192 ----KQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRL 247
K NL KL DIL Y + ++GY QGM+DL SP+ ++ +E FWCF M R+
Sbjct: 492 DDSIKNPNLKKLADILTTYNIFNPNLGYVQGMTDLLSPLYYIIRDEETTFWCFTNFMERM 551
Query: 248 RGNFRCTESSVGVETQLSNLASITQ 272
NF +S G+ Q+ L + Q
Sbjct: 552 ERNFLRDQS--GIRDQMLALTDLCQ 574
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 169 WMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMII 228
+ + LH+I DV R DR+ +Y NL KL +I+ Y W ++GY QGM DL +P+++
Sbjct: 877 YTVNLHRIEKDVQRCDRS-YWYFTAANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLV 935
Query: 229 LLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQ 272
+L++EA AF CF LM+R+ NF ++T +N+ S+ Q
Sbjct: 936 ILDDEALAFSCFTELMKRMNQNF---PHGGAMDTHFANMRSLIQ 976
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 32 GKTLSARKWQAAFTPEGQLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREE 91
G+ L+A W+ + L I+ GG+ P IR VW FLLG Y+ T ER+E
Sbjct: 531 GQGLTASIWEKYIQDSTTYPEQELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKE 590
Query: 92 IRQR 95
+ ++
Sbjct: 591 VDEQ 594
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 169 WMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMII 228
+ + LH+I DV R DR +Y NL KL +I+ Y W ++GY QGM DL +P+++
Sbjct: 932 YTVNLHRIEKDVQRCDRN-YWYFTPANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLV 990
Query: 229 LLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQ 272
+L++EA AF CF LM+R+ NF ++T +N+ S+ Q
Sbjct: 991 ILDDEALAFSCFTELMKRMNQNF---PHGGAMDTHFANMRSLIQ 1031
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 32 GKTLSARKWQAAFTPEGQLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREE 91
G+ L+AR W+ + + L I+ GGI P IR VW FLLG Y+ T ER+E
Sbjct: 586 GQGLTARIWEQYLHDSTSYEEQELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKE 645
Query: 92 IRQR 95
+ ++
Sbjct: 646 VDEQ 649
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 98/258 (37%), Gaps = 70/258 (27%)
Query: 28 KIKPGKTLSARKWQAAFTPEG--QLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKST 85
++K LS +W + F G Q+D+ + L I GGI PS+R EVW FLL Y ST
Sbjct: 374 RVKRDDPLSVEQWNSMFNAHGKLQVDVHRVLGIIFHGGIQPSLRKEVWPFLLSVYPWDST 433
Query: 86 FDEREEIRQRRRLQY----SAWKEECHQIFP---VVGSGKFITAPVVTEDGQ-------- 130
+ER I + +Y W E+ H+ F + I V D Q
Sbjct: 434 SEERRVIYLSLQEEYCTLKRKWYEDIHKQFNDRWFIEQRNRIEKDVHRTDRQHEYFQIED 493
Query: 131 -PIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVF 189
P DP Q T +G + + M LL++ D
Sbjct: 494 LPHPDP---QSTFTGTNMNMEMMKDILLTYNEYDT------------------------- 525
Query: 190 YEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRG 249
++GY QGMSDL +P+ + + A FW LM+RL
Sbjct: 526 ----------------------ELGYVQGMSDLLAPIYVTFNDNALTFWGMVGLMKRLHF 563
Query: 250 NFRCTESSVGVETQLSNL 267
NF +S G+ QL L
Sbjct: 564 NFLRDQS--GMHRQLDTL 579
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 47/258 (18%)
Query: 33 KTLSARKWQAAFTPEGQL--DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDERE 90
K +S +W+ F G+L I + RI GG+ IRGE W FLL Y S+ +ER+
Sbjct: 363 KPISKVEWEGLFDFSGRLIISIDEIKDRIFHGGLEDCIRGEAWLFLLNVYPWDSSAEERK 422
Query: 91 EIRQRRRLQYSA----------------WKEECHQIFPVVGSGKFITAPVVTEDGQPIQD 134
+R + Y WK++ H+I + + + ++ + I
Sbjct: 423 TLRNSFQTAYEEIKLKWVNDDDKRSVDFWKDQKHRIEKDINRTDRNLS--IFQNKKKI-- 478
Query: 135 PLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQE 194
+ SG+ + +E P D D V
Sbjct: 479 ------SISGVGSDRLPTTRESSPETP-----------------DEADDDEFDVSNITNP 515
Query: 195 NLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCT 254
+L K+ +IL Y + ++GY QGM+DL SP+ + ++E+ FW F M R+ NF
Sbjct: 516 HLFKMREILLTYNEHNVNLGYVQGMTDLLSPLYVTFQDESLTFWAFVNFMDRMERNFLRD 575
Query: 255 ESSVGVETQLSNLASITQ 272
+S G++ Q+ L + Q
Sbjct: 576 QS--GMKNQMLTLNELVQ 591
>sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2
Length = 688
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 179 DVIRTDRTLVFYEKQEN---LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEAD 235
DV+RTDR +Y E+ L L D+L YA V YCQGMSDL SP++ ++++E
Sbjct: 291 DVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGH 350
Query: 236 AFWCFERLMRRLRGNF 251
AF CF +M+RL NF
Sbjct: 351 AFVCFCGIMKRLAANF 366
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 29 IKPGKT-LSARKWQAAFTPEGQLDIGKTLS-RIHRGGIHPSIRGEVWEFLLGCYEPKSTF 86
+KP K LS ++ EGQL + L RI+ GG+ PS+R VW +LL Y T
Sbjct: 192 VKPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTG 251
Query: 87 DEREEIRQRRRLQYSAWKEECHQ 109
ER + +R+ +Y K E Q
Sbjct: 252 RERMDYMKRKSREYEQLKSEWAQ 274
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 27/129 (20%)
Query: 169 WMLTLHQIGLDVIRTDRTLVFYEKQE-------------------------NLSKLWDIL 203
W L +I DV RTDR + F+ + + +L +L D+L
Sbjct: 444 WRDQLSRIEKDVHRTDRNITFFAECDAKKDGDDDNYDKDEFGFSSQINSNIHLIQLRDML 503
Query: 204 AVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQ 263
Y ++++GY QGMSDL SP+ ++L+++ AFW F M R+ N+ +S G+ Q
Sbjct: 504 ITYNQHNKNLGYVQGMSDLLSPLYVVLQDDTLAFWAFSAFMERMERNYLRDQS--GMRNQ 561
Query: 264 LSNLASITQ 272
L L + Q
Sbjct: 562 LLCLDHLVQ 570
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 35 LSARKWQAAFTPEGQL--DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYEPKSTFDEREEI 92
+S +W A F G+L + + RI GG+ P++R E W FLLG Y ST ER+E+
Sbjct: 358 VSLAEWNAFFDYNGRLIVTVNEVKERIFHGGLAPAVRPEGWLFLLGVYPWDSTAAERKEL 417
Query: 93 RQRRRLQYSAWKEE 106
+ R+ Y+ K+E
Sbjct: 418 VSKLRVDYNRLKKE 431
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 196 LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTE 255
L L +IL Y + ++GY QGM+DL SP+ ++++ E FWCF M + NF +
Sbjct: 510 LIHLQNILITYNVYNTNLGYVQGMTDLLSPIYVIMKEEWKTFWCFTHFMDIMERNFLRDQ 569
Query: 256 SSVGVETQLSNLASITQRHWAEVTISLRSECLWSCSVENFHF 297
S G+ Q+ L + Q E+ SE L C N F
Sbjct: 570 S--GIHEQMLTLVELVQLMLPEL-----SEHLNKCDSGNLFF 604
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 35 LSARKWQAAFTP-EGQL--DIGKTLSRIHRGGI-HPSIRGEVWEFLLGCYEPKSTFDERE 90
L+ KW + + +G+L + + I GG+ + S+RG+VW FLL Y S+ DER
Sbjct: 353 LTEAKWNSLWDENDGRLRVTVNEVKDFIFHGGLENDSLRGKVWGFLLEIYPWDSSQDERV 412
Query: 91 EIRQRRRLQYSAWK 104
+I Q +Y K
Sbjct: 413 QIDQTLAAEYDQLK 426
>sp|Q80XC3|US6NL_MOUSE USP6 N-terminal-like protein OS=Mus musculus GN=Usp6nl PE=1 SV=2
Length = 819
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 173 LHQIGLDVIRTDRTLVFYEKQENLSK--LWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
+ QI LDV RT R + + + + + L+ +LA Y+ + +VGYCQGMS + + ++++
Sbjct: 141 IRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITA-LLLMY 199
Query: 231 ENEADAFWCFERLM 244
NE DAFW +L
Sbjct: 200 MNEEDAFWALVKLF 213
>sp|Q92738|US6NL_HUMAN USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3
Length = 828
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 173 LHQIGLDVIRTDRTLVFYEKQENLSK--LWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
+ QI LDV RT R + + + + + L+ +LA Y+ + +VGYCQGMS + + ++++
Sbjct: 141 IRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITA-LLLMY 199
Query: 231 ENEADAFWCFERLM 244
NE DAFW +L
Sbjct: 200 MNEEDAFWALVKLF 213
>sp|O59737|GYP1_SCHPO GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp1 PE=3 SV=1
Length = 514
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 79/236 (33%)
Query: 62 GGIHPSIRGEVWEFLLGCYEPKSTFDEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFIT 121
GI R VW++LLG Y P + RE +R+R +Y+A K+ C
Sbjct: 215 NGIPSEHRPIVWKYLLG-YLPCNA-SRREVTLKRKRDEYNAAKDSC-------------- 258
Query: 122 APVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVI 181
+ +P PLD+ + W QI LDV
Sbjct: 259 ---FNTNTEP----------------------------PPLDQTI--W----RQIVLDVP 281
Query: 182 RTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPM--------------- 226
RT+ +++ Y+ L IL V+A GY QG+SDL +P
Sbjct: 282 RTNPSILLYQNPLTQRMLERILYVWASRHPASGYVQGISDLVTPFIQVFLSEYIGDKDPM 341
Query: 227 ---IILLEN------EADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQR 273
I LL+ EADA+WC +L+ ++ N+ + G+ Q++NL +T R
Sbjct: 342 TYDIALLDETNRNDIEADAYWCLSKLLDGIQDNY--IHAQPGIRRQVNNLRELTLR 395
>sp|Q9UPU7|TBD2B_HUMAN TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2
Length = 963
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 175 QIGLDVIRTDRTLVFYE--KQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLEN 232
QI LD++RT Y E + KL ++L ++W + D+GYCQG++ L + ++ LE
Sbjct: 709 QIELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQ 768
Query: 233 EADAFWCF 240
E DAFWC
Sbjct: 769 E-DAFWCL 775
>sp|Q28CB1|TBD2B_XENTR TBC1 domain family member 2B OS=Xenopus tropicalis GN=tbc1d2b PE=2
SV=1
Length = 943
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 175 QIGLDVIRTDRTLVFYEK--QENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLEN 232
QI LD++RT Y E + KL ++L Y+W + D+GYCQG++ L + ++ L+
Sbjct: 689 QIELDLMRTLPNNKHYTSPTSEGIQKLRNVLLAYSWRNPDIGYCQGINRLAAIALLYLDQ 748
Query: 233 EADAFWCF 240
E DAFWC
Sbjct: 749 E-DAFWCL 755
>sp|Q3U0J8|TBD2B_MOUSE TBC1 domain family member 2B OS=Mus musculus GN=Tbc1d2b PE=1 SV=2
Length = 965
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 175 QIGLDVIRTDRTLVFYEK--QENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLEN 232
QI LD++RT Y E + KL +L ++W + D+GYCQG++ L + ++ L+
Sbjct: 711 QIELDLLRTLPNNKHYSSPTSEGIQKLRSVLLAFSWRNPDIGYCQGLNRLVAVALLYLDQ 770
Query: 233 EADAFWCF 240
E DAFWC
Sbjct: 771 E-DAFWCL 777
>sp|O60447|EVI5_HUMAN Ecotropic viral integration site 5 protein homolog OS=Homo sapiens
GN=EVI5 PE=1 SV=3
Length = 810
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 176 IGLDVIRTDRTLVFYEKQENLSK--LWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENE 233
I D+ RT F++++++L + L++++ Y+ VDR+VGYCQG S ++++ E
Sbjct: 202 IRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQG-SAFIVGLLLMQMPE 260
Query: 234 ADAFWCFERLMR--RLRGNFRCTESSVGVETQLSNLASITQRHWAEVTISLRSECLWSCS 291
+AF F +LM+ RLR F+ + + +G+ + + Q H E+ + +S+ +
Sbjct: 261 EEAFCVFVKLMQDYRLRELFKPSMAELGL--CMYQFECMIQEHLPELFVHFQSQSFHTSM 318
Query: 292 VENFHFVTHYIS 303
+ F+T +++
Sbjct: 319 YASSWFLTIFLT 330
>sp|Q96CN4|EVI5L_HUMAN EVI5-like protein OS=Homo sapiens GN=EVI5L PE=1 SV=1
Length = 794
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 176 IGLDVIRTDRTLVFYEKQENLSK--LWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENE 233
I D+ RT F++ Q++L + L++++ Y+ VDR+VGYCQG S ++++ E
Sbjct: 154 IRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQG-SAFIVGLLLMQMPE 212
Query: 234 ADAFWCFERLMR--RLRGNFRCTESSVGVETQLSNLASITQRHWAEVTISLRSECLWSCS 291
+AF F RLM+ RLR F+ + + +G+ + + Q ++ RS+ +
Sbjct: 213 EEAFCVFVRLMQEYRLRELFKPSMAELGL--CIYQFEYMLQEQLPDLNTHFRSQSFHTSM 270
Query: 292 VENFHFVTHYIS 303
+ F+T +++
Sbjct: 271 YASSWFLTLFLT 282
>sp|Q4QQU7|GRTP1_RAT Growth hormone-regulated TBC protein 1 OS=Rattus norvegicus
GN=Grtp1 PE=2 SV=1
Length = 289
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 162 LDKKVIQWMLTLHQIG------LDVIRTDRTLVFYEKQEN--LSK-LWDILAVYAWVDRD 212
L K+ I+W L G D+ RT V + K + L K L+++L Y ++D
Sbjct: 44 LTKRAIKWSKLLKGSGGVRKSVTDLNRTFPDNVMFRKTADPCLQKTLYNVLLAYGLHNQD 103
Query: 213 VGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQ 272
VGYCQGM+ + +I++ +NE ++FW + L+ R+ ++ + + +G++T LA + +
Sbjct: 104 VGYCQGMNFIAGYLILITKNEEESFWLLDALVGRILPDYY-SPAMLGLKTDQEVLAELVR 162
Query: 273 RHWAEVTISLRSE-CLWSCSV 292
V + LW+ V
Sbjct: 163 MKLPAVAALMDGHGVLWTLLV 183
>sp|Q12344|GYP5_YEAST GTPase-activating protein GYP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP5 PE=1 SV=1
Length = 894
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 180 VIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWC 239
IR D + ++ + L+ ++ VY+ D DVGY QGM + +P++I ENEA++F
Sbjct: 489 TIRRDLRRTKFVAEDKMESLYKVIKVYSVYDPDVGYTQGMGFIAAPLLINCENEAESFGL 548
Query: 240 FERLMRR 246
LM+
Sbjct: 549 LVGLMKN 555
>sp|Q6GL87|GRTP1_XENTR Growth hormone-regulated TBC protein 1 OS=Xenopus tropicalis
GN=grtp1 PE=2 SV=1
Length = 342
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 154 KELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQENLS---KLWDILAVYAWVD 210
+ + + G + K++ ++T D+ RT V ++K N S L+++L Y +
Sbjct: 100 RRMFTEGEKNPKLLDLVIT------DLNRTFPDNVLFQKNANPSLQKDLYNVLVAYGQHN 153
Query: 211 RDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASI 270
+ VGYCQGM+ + +I++ ++E AFW + L+ ++ ++ + + G++T L +
Sbjct: 154 KTVGYCQGMNFIAGYLILVTKDEEKAFWLMDALIGQILPDY-YSPAMTGLKTDQEVLGDL 212
Query: 271 TQRHWAEVTISLRSE-CLWSCSV 292
++ V + + +W+ V
Sbjct: 213 VKKKIPSVAQLIETHGVMWTLLV 235
>sp|Q6GLZ0|GRTP1_XENLA Growth hormone-regulated TBC protein 1 OS=Xenopus laevis GN=grtp1
PE=2 SV=1
Length = 342
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 178 LDVIRTDRTLVF-----YEKQENLS---KLWDILAVYAWVDRDVGYCQGMSDLCSPMIIL 229
LD++ TD F + K N S L+++L Y + VGYCQGM+ + +I++
Sbjct: 113 LDLVNTDLNRTFPDNVQFRKNSNPSLQKHLYNVLVAYGQHNTTVGYCQGMNFIAGYLILV 172
Query: 230 LENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQRHWAEVTISLRSE-CLW 288
++E AFW + L+ R+ ++ + + G++T L + ++ V+ + + +W
Sbjct: 173 TKDEEKAFWLMDALIGRILPDY-YSPAMTGLKTDQEVLGDLVKKKLPAVSQLIEAHGVMW 231
Query: 289 SCSV 292
+ V
Sbjct: 232 TLLV 235
>sp|P53258|GYP2_YEAST GTPase-activating protein GYP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDR1 PE=1 SV=1
Length = 950
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 173 LHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLEN 232
+ +I D+ R+ Y+ +E + +L ++L Y+W + DVGYCQ M+ + + +I + +
Sbjct: 286 IDEIEKDLKRSLPEYSAYQTEEGIQRLRNVLTAYSWKNPDVGYCQAMNIVVAGFLIFM-S 344
Query: 233 EADAFWCF 240
E AFWC
Sbjct: 345 EEQAFWCL 352
>sp|C8VDQ4|GYP2_EMENI Putative GTPase-activating protein AN11010 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN11010 PE=4 SV=1
Length = 1120
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 168 QWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMI 227
Q L + +I D+ R+ ++ +E + +L +L Y+W + ++GYCQ M+ + + ++
Sbjct: 328 QESLAIDEIEKDLNRSLPEYAGFQSEEGIGRLRRVLTAYSWTNAEIGYCQAMNIVVAALL 387
Query: 228 ILLENEADAFWCFERLMRRLRGNFRCT 254
I + +EA AF+ L RL + T
Sbjct: 388 IYM-SEAQAFFLLSVLCDRLVPGYYST 413
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 118 KFITAPVVTEDGQPIQDPLVLQETNSGISASSSKMVKELLSHG-PLDKKVIQWMLT---- 172
KF ++ +VT + I+ +LQ G S+ VK + G PL+ + WM+
Sbjct: 30 KFFSSYLVTLTRRAIKWSRLLQ----GGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQ 85
Query: 173 ---------LHQIGL--------DVIRTDRTLVF-----YEKQEN---LSKLWDILAVYA 207
HQ+ D IRTD F + K + L+++L Y
Sbjct: 86 AQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYG 145
Query: 208 WVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNL 267
++ VGYCQGM+ + +I++ NE ++FW + L+ R+ ++ + + +G++T L
Sbjct: 146 HHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDY-YSPAMLGLKTDQEVL 204
Query: 268 ASITQRHWAEVTISL-RSECLWSCSV 292
+ + V + R LW+ V
Sbjct: 205 GELVRAKLPAVGALMERLGVLWTLLV 230
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 30/142 (21%)
Query: 172 TLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMI---- 227
T HQI +D+ RT+ + Y+ + + L IL ++A GY QG++DL +P
Sbjct: 333 TWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFFETFL 392
Query: 228 ------------------------ILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQ 263
+ + EAD FWC +L+ ++ N+ G+ Q
Sbjct: 393 TEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQITDNY--IHGQPGILRQ 450
Query: 264 LSNLASITQRHWAEVTISLRSE 285
+ NL+ + +R A++ ++E
Sbjct: 451 VKNLSQLVKRIDADLYNHFQNE 472
>sp|B1AVH7|TBD2A_MOUSE TBC1 domain family member 2A OS=Mus musculus GN=Tbc1d2 PE=2 SV=1
Length = 922
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 175 QIGLDVIRTDRTLVFYE--KQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLEN 232
QI LD+ RT T + KL +L ++W + +GYCQG++ L + +++LE+
Sbjct: 663 QIELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLED 722
Query: 233 EADAFWCF 240
E AFWC
Sbjct: 723 EESAFWCL 730
>sp|B5DFA1|TBD2A_RAT TBC1 domain family member 2A OS=Rattus norvegicus GN=Tbc1d2 PE=2
SV=1
Length = 924
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 175 QIGLDVIRTDRTLVFY--EKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLEN 232
QI LD+ RT T + KL +L ++W + +GYCQG++ L + +++LE+
Sbjct: 665 QIELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLED 724
Query: 233 EADAFWCF 240
E AFWC
Sbjct: 725 EESAFWCL 732
>sp|O60347|TBC12_HUMAN TBC1 domain family member 12 OS=Homo sapiens GN=TBC1D12 PE=1 SV=3
Length = 775
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 172 TLHQIGLDVIRTDRTLVFYEKQENLSK-LWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
+L I LD+ RT +L ++K L IL Y DVGY QGMS + + +I+ L
Sbjct: 543 SLELIKLDISRTFPSLYIFQKGGPYHDVLHSILGAYTCYRPDVGYVQGMSFIAAVLILNL 602
Query: 231 ENEADAFWCFERLMRR 246
E EADAF F L+ +
Sbjct: 603 E-EADAFIAFANLLNK 617
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 198 KLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCF 240
KL +L ++W + +GYCQG++ L + +++LE E AFWC
Sbjct: 700 KLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCL 742
>sp|Q9BYX2|TBD2A_HUMAN TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3
Length = 928
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 198 KLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCF 240
KL +L ++W + +GYCQG++ L + +++LE E AFWC
Sbjct: 694 KLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCL 736
>sp|Q6A039|TBC12_MOUSE TBC1 domain family member 12 OS=Mus musculus GN=Tbc1d12 PE=1 SV=2
Length = 696
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 172 TLHQIGLDVIRTDRTLVFYEKQENLSK-LWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
+L I LD+ RT +L ++K L IL Y DVGY QGMS + + +I+ L
Sbjct: 464 SLELIKLDISRTFPSLYIFQKGGPYHDVLHSILGAYTCYRPDVGYVQGMSFIAAVLILNL 523
Query: 231 ENEADAFWCFERLMRR 246
E EADAF F L+ +
Sbjct: 524 E-EADAFIAFANLLNK 538
>sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GYP5
PE=3 SV=2
Length = 829
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 145 ISASSSKMVKELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILA 204
IS S SK +++L Q +L + I+ D + + + L+++L
Sbjct: 384 ISNSKSKEIRQLY----------QDLLQIPSEHEKAIQRDISRTKFIPVDKTESLFNVLK 433
Query: 205 VYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMR 245
Y+ D +VGY QGM+ + +P++I + EADAF +LM+
Sbjct: 434 AYSLFDPEVGYTQGMAFVTAPLLINVWEEADAFGLLIKLMK 474
>sp|O97790|TBCD1_BOVIN TBC1 domain family member 1 OS=Bos taurus GN=TBC1D1 PE=2 SV=2
Length = 1165
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 161 PLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKL--WDILAVYAWVDRDVGYCQG 218
P + + Q H I +D+ RT T +Y Q +L ++IL Y+ +D++VGYCQG
Sbjct: 830 PYKELLKQLTSQQHAILIDLGRTFPTHPYYSAQLGAGQLSLYNILKAYSLLDQEVGYCQG 889
Query: 219 MSDLCSPMIILLENEADAFWCFERLM--RRLRGNFR 252
+S + +++L E +AF + LM LR +R
Sbjct: 890 LS-FVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYR 924
>sp|Q0IHY4|TBC12_XENTR TBC1 domain family member 12 OS=Xenopus tropicalis GN=tbc1d12 PE=2
SV=1
Length = 684
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 172 TLHQIGLDVIRTDRTLVFYEKQENLSKLW-DILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
+L I LD+ RT +L ++K L IL Y DVGY QGMS + + +I+ L
Sbjct: 453 SLELIKLDISRTFPSLYIFQKGGPYHDLLHSILGAYTCYRPDVGYVQGMSFIAAVLILNL 512
Query: 231 ENEADAFWCFERLMRR 246
E EADAF F L+ +
Sbjct: 513 E-EADAFIAFANLLNK 527
>sp|Q6PBU5|GRT1A_DANRE Growth hormone-regulated TBC protein 1-A OS=Danio rerio GN=grtp1a
PE=2 SV=1
Length = 356
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 199 LWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSV 258
L+++L Y ++ VGYCQGM+ + +I++ ++E +FW E L+ R+ ++ T + +
Sbjct: 156 LYNVLVAYGHHNKAVGYCQGMNFIAGYLILVSKDEETSFWLMEALLSRILPDY-YTPAML 214
Query: 259 GVETQLSNLASITQ 272
G++T L + +
Sbjct: 215 GLKTDQEVLGELVR 228
>sp|Q09830|YAD4_SCHPO TBC domain-containing protein C4G8.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G8.04 PE=1 SV=1
Length = 772
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 172 TLHQIGLDVIRTDRTLVFYE-KQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILL 230
++ QI +D+ RT VF+ K + KL IL Y+ + +GYCQGM+ + + +++L
Sbjct: 543 SVAQIDMDINRTMAKNVFFGGKGPGIPKLRRILVAYSRHNPHIGYCQGMNVIGAFLLLLY 602
Query: 231 ENEADAFWCFERLMRRL 247
+E DAF+ ++ +
Sbjct: 603 ASEEDAFYMLMSIIENV 619
>sp|Q86TI0|TBCD1_HUMAN TBC1 domain family member 1 OS=Homo sapiens GN=TBC1D1 PE=1 SV=2
Length = 1168
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 161 PLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKL--WDILAVYAWVDRDVGYCQG 218
P + + Q H I +D+ RT T ++ Q +L ++IL Y+ +D++VGYCQG
Sbjct: 833 PYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQG 892
Query: 219 MSDLCSPMIILLENEADAFWCFERLM--RRLRGNFR 252
+S + +++L +E +AF + LM LR +R
Sbjct: 893 LS-FVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYR 927
>sp|A6QP29|TBD2A_BOVIN TBC1 domain family member 2A OS=Bos taurus GN=TBC1D2 PE=2 SV=1
Length = 925
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 198 KLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCF 240
KL +L ++W + +GYCQG++ L + +++L+ E AFWC
Sbjct: 691 KLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLDEEESAFWCL 733
>sp|Q60949|TBCD1_MOUSE TBC1 domain family member 1 OS=Mus musculus GN=Tbc1d1 PE=1 SV=3
Length = 1255
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 174 HQIGLDVIRTDRTLVFYEKQENLSKL--WDILAVYAWVDRDVGYCQGMSDLCSPMIILLE 231
H I +D+ RT T ++ Q +L ++IL Y+ +D++VGYCQG+S + +++L
Sbjct: 933 HAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLS-FVAGILLLHM 991
Query: 232 NEADAFWCFERLM--RRLRGNFR 252
+E +AF + LM LR +R
Sbjct: 992 SEEEAFKMLKFLMFDMGLRKQYR 1014
>sp|Q8R3D1|TBC13_MOUSE TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1
Length = 400
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 202 ILAVYAWVDRDVGYCQGMSDLCSPMIILLEN----------EADAFWCFERLMRRLRGNF 251
IL +YA ++ + Y QGM+++ P+ EAD F+CF LM +R NF
Sbjct: 214 ILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNF 273
Query: 252 --RCTESSVGVETQLSNLASITQRHWAEVTISLRSECL 287
+S G+ ++ + S + E+ + L+ + +
Sbjct: 274 IKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQSI 311
>sp|Q8BYJ6|TBCD4_MOUSE TBC1 domain family member 4 OS=Mus musculus GN=Tbc1d4 PE=1 SV=2
Length = 1307
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 159 HGPLDKKVIQWMLTL----HQIGLDVIRTDRTLVFYEKQENLSKL--WDILAVYAWVDRD 212
H P D + + L H I +D+ RT T ++ Q +L +++L Y+ +D++
Sbjct: 954 HQPPDTSYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGAGQLSLFNLLKAYSLLDKE 1013
Query: 213 VGYCQGMSDLCSPMIILLENEADAFWCFERLMRRL--RGNFRCTESSVGVET-QLSNLAS 269
VGYCQG+S + +++L +E AF + LM L R +R S+ ++ QLS L
Sbjct: 1014 VGYCQGIS-FVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLH 1072
Query: 270 ITQR----HWAEVTIS 281
R H E IS
Sbjct: 1073 DYHRELYNHLEENEIS 1088
>sp|Q9NVG8|TBC13_HUMAN TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3
Length = 400
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 202 ILAVYAWVDRDVGYCQGMSDLCSPMIILLEN----------EADAFWCFERLMRRLRGNF 251
IL +YA ++ + Y QGM+++ P+ EAD F+CF LM +R NF
Sbjct: 214 ILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNF 273
Query: 252 --RCTESSVGVETQLSNLASITQRHWAEVTISLRSE 285
+S G+ ++ + S + E+ + L+ +
Sbjct: 274 IKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQ 309
>sp|Q8IYX1|TBC21_HUMAN TBC1 domain family member 21 OS=Homo sapiens GN=TBC1D21 PE=2 SV=1
Length = 336
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 95/247 (38%), Gaps = 59/247 (23%)
Query: 29 IKPGKTLSARKWQAAFTPEGQLDIGKTL--SRIHRGGIHPSIRGEVWEFLLGCYEPKSTF 86
+K + +W + F G L + I G+HP +R E W+FL G + +S+
Sbjct: 21 VKRKPPIDKTEWDSFFDESGHLAKSRDFICVNILERGLHPFVRTEAWKFLTGYFSWQSSQ 80
Query: 87 DEREEIRQRRRLQYSAWKEECHQIFPVVGSGKFITAPVVTEDGQPIQDPL--VLQETNSG 144
DER + RR Y A + +I QP+ + L ET +
Sbjct: 81 DERLTVDSMRRKNYKALCQMYEKI-------------------QPLLENLHRNFTETRNN 121
Query: 145 ISASSSKMV-KELLSHGPLDKKVIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDIL 203
I+ K+ K+ L + +DKK ++ +L L +
Sbjct: 122 IARDIQKIYDKDPLGNVLIDKKRLEKILLLSYV--------------------------- 154
Query: 204 AVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQ 263
+ Y QG ++ +++E++ + FW F+ +++ + C ++GV
Sbjct: 155 -----CNTQAEYQQGFHEMMMLFQLMVEHDHETFWLFQFFLQKTEHS--CV-INIGVAKN 206
Query: 264 LSNLASI 270
L L+++
Sbjct: 207 LDMLSTL 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,156,687
Number of Sequences: 539616
Number of extensions: 4856886
Number of successful extensions: 10525
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 10351
Number of HSP's gapped (non-prelim): 203
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)