Query 021939
Match_columns 305
No_of_seqs 271 out of 2010
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 06:48:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021939.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021939hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 7.5E-90 1.6E-94 599.6 17.3 303 2-305 1-303 (303)
2 KOG0373 Serine/threonine speci 100.0 8.7E-80 1.9E-84 529.2 19.7 301 3-305 5-306 (306)
3 PTZ00239 serine/threonine prot 100.0 2.7E-76 5.9E-81 546.7 29.2 288 3-291 2-290 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.8E-76 6E-81 543.5 27.7 285 3-288 1-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 8.7E-76 1.9E-80 545.9 26.6 282 3-285 6-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 1.7E-75 3.8E-80 543.2 28.5 288 2-290 9-304 (320)
7 PTZ00244 serine/threonine-prot 100.0 1.8E-74 4E-79 532.8 25.8 285 1-286 1-293 (294)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 4.8E-74 1E-78 530.5 26.7 283 4-287 2-292 (293)
9 cd07416 MPP_PP2B PP2B, metallo 100.0 1.2E-73 2.7E-78 530.8 27.9 288 3-292 2-302 (305)
10 KOG0374 Serine/threonine speci 100.0 2.6E-74 5.7E-79 537.0 22.1 272 16-287 31-303 (331)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.4E-73 5.3E-78 530.2 26.1 286 3-290 15-307 (316)
12 smart00156 PP2Ac Protein phosp 100.0 7.5E-72 1.6E-76 511.7 25.7 270 17-287 1-270 (271)
13 KOG0371 Serine/threonine prote 100.0 3.2E-71 6.9E-76 485.7 15.3 301 3-305 19-319 (319)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.4E-68 3E-73 498.7 26.4 272 15-286 19-311 (311)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 1.8E-68 3.9E-73 504.0 26.4 284 3-287 11-366 (377)
16 KOG0375 Serine-threonine phosp 100.0 4.8E-69 1E-73 490.0 12.7 285 4-290 48-345 (517)
17 KOG0377 Protein serine/threoni 100.0 4.6E-58 1E-62 426.8 11.9 285 3-288 120-433 (631)
18 KOG0376 Serine-threonine phosp 100.0 8.5E-52 1.8E-56 392.2 12.4 286 5-292 171-463 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.1E-36 2.5E-41 270.9 18.5 215 47-272 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.4E-27 7.4E-32 213.8 14.9 123 44-168 1-146 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 2.5E-26 5.4E-31 203.3 13.3 177 47-258 1-197 (208)
22 PRK00166 apaH diadenosine tetr 99.9 4.9E-25 1.1E-29 202.3 14.6 125 44-172 1-131 (275)
23 TIGR00668 apaH bis(5'-nucleosy 99.9 5.3E-26 1.2E-30 207.4 7.8 123 44-170 1-129 (279)
24 cd07423 MPP_PrpE Bacillus subt 99.9 2.9E-25 6.2E-30 199.8 11.9 123 44-168 1-143 (234)
25 cd07422 MPP_ApaH Escherichia c 99.9 3.4E-25 7.4E-30 201.4 10.6 121 46-170 1-127 (257)
26 cd07413 MPP_PA3087 Pseudomonas 99.9 9.2E-25 2E-29 195.1 13.1 117 46-165 1-143 (222)
27 PRK11439 pphA serine/threonine 99.9 4.8E-24 1E-28 189.9 12.5 116 44-165 17-146 (218)
28 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.3E-23 2.9E-28 192.1 14.2 199 45-274 3-292 (304)
29 PHA02239 putative protein phos 99.9 1.3E-23 2.9E-28 189.0 12.6 138 44-197 1-184 (235)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 5.1E-23 1.1E-27 181.8 13.8 143 44-198 1-157 (207)
31 PRK09968 serine/threonine-spec 99.9 2.2E-21 4.7E-26 172.9 11.3 116 44-165 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 2.3E-12 4.9E-17 105.7 7.9 77 44-120 1-83 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 3E-10 6.6E-15 95.2 13.1 59 45-115 1-59 (155)
34 PF12850 Metallophos_2: Calcin 99.2 3.3E-10 7E-15 94.3 11.0 61 44-116 1-61 (156)
35 COG0639 ApaH Diadenosine tetra 99.1 3.2E-10 7E-15 92.6 8.9 144 117-261 3-154 (155)
36 TIGR00040 yfcE phosphoesterase 99.1 1.3E-09 2.8E-14 92.0 12.3 63 44-115 1-64 (158)
37 PRK09453 phosphodiesterase; Pr 99.1 2.5E-10 5.4E-15 98.7 6.9 69 44-116 1-77 (182)
38 cd07379 MPP_239FB Homo sapiens 99.0 2.1E-09 4.5E-14 88.4 8.6 118 45-244 1-120 (135)
39 cd07397 MPP_DevT Myxococcus xa 99.0 2.8E-09 6E-14 95.9 9.5 113 45-166 2-159 (238)
40 cd00838 MPP_superfamily metall 98.7 6.1E-08 1.3E-12 76.8 9.3 117 47-244 1-119 (131)
41 cd07388 MPP_Tt1561 Thermus the 98.7 2.1E-08 4.6E-13 89.7 6.9 71 44-115 5-75 (224)
42 cd07394 MPP_Vps29 Homo sapiens 98.7 7.7E-07 1.7E-11 76.9 14.4 62 45-115 1-65 (178)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.5 3.3E-07 7E-12 78.5 7.0 66 46-117 1-67 (188)
44 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 3.4E-07 7.4E-12 82.2 6.3 207 46-277 1-230 (231)
45 cd07399 MPP_YvnB Bacillus subt 98.4 1.3E-05 2.8E-10 71.1 14.8 193 45-286 2-213 (214)
46 cd07400 MPP_YydB Bacillus subt 98.4 6E-06 1.3E-10 68.0 11.6 117 46-244 1-129 (144)
47 cd07403 MPP_TTHA0053 Thermus t 98.4 3.3E-06 7.2E-11 69.0 9.6 56 47-113 1-56 (129)
48 cd07385 MPP_YkuE_C Bacillus su 98.4 6.9E-07 1.5E-11 79.0 5.9 71 44-116 2-77 (223)
49 PRK11340 phosphodiesterase Yae 98.3 8.5E-07 1.9E-11 81.6 6.5 70 44-115 50-125 (271)
50 KOG0376 Serine-threonine phosp 98.3 4.1E-07 8.9E-12 87.9 3.4 242 16-262 14-299 (476)
51 cd07404 MPP_MS158 Microscilla 98.3 8.1E-07 1.7E-11 75.3 4.2 67 46-115 1-68 (166)
52 COG0622 Predicted phosphoester 98.2 4.4E-05 9.5E-10 65.6 13.0 65 44-116 2-66 (172)
53 PRK05340 UDP-2,3-diacylglucosa 98.2 3.7E-06 7.9E-11 75.9 6.2 71 44-116 1-84 (241)
54 TIGR03729 acc_ester putative p 98.0 9.6E-06 2.1E-10 73.0 6.5 68 45-115 1-74 (239)
55 cd07395 MPP_CSTP1 Homo sapiens 98.0 0.00014 2.9E-09 66.3 13.6 70 46-115 7-99 (262)
56 TIGR00619 sbcd exonuclease Sbc 98.0 1.5E-05 3.3E-10 72.6 6.4 72 44-115 1-88 (253)
57 PRK04036 DNA polymerase II sma 98.0 0.00018 3.9E-09 71.9 14.5 71 44-116 244-344 (504)
58 cd07390 MPP_AQ1575 Aquifex aeo 98.0 2.8E-05 6E-10 66.4 7.5 67 46-117 1-84 (168)
59 cd07396 MPP_Nbla03831 Homo sap 97.9 3.6E-05 7.7E-10 70.5 7.0 73 45-117 2-88 (267)
60 PHA02546 47 endonuclease subun 97.8 3.1E-05 6.8E-10 73.5 6.3 72 44-115 1-89 (340)
61 cd07398 MPP_YbbF-LpxH Escheric 97.7 0.00013 2.8E-09 64.2 7.6 69 47-116 1-83 (217)
62 cd07402 MPP_GpdQ Enterobacter 97.7 0.00011 2.4E-09 65.6 7.1 67 45-115 1-83 (240)
63 COG2129 Predicted phosphoester 97.7 0.0023 5E-08 56.8 14.8 212 43-284 3-224 (226)
64 cd00840 MPP_Mre11_N Mre11 nucl 97.6 9.1E-05 2E-09 65.1 5.8 72 45-117 1-91 (223)
65 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00013 2.9E-09 66.8 6.5 70 46-115 1-86 (262)
66 cd08165 MPP_MPPE1 human MPPE1 97.6 0.00011 2.3E-09 62.1 5.4 49 67-115 35-89 (156)
67 cd07393 MPP_DR1119 Deinococcus 97.6 0.00016 3.5E-09 64.9 6.7 65 46-114 1-83 (232)
68 PRK11148 cyclic 3',5'-adenosin 97.6 0.00014 3E-09 66.9 6.1 70 44-115 15-98 (275)
69 TIGR00024 SbcD_rel_arch putati 97.6 0.00022 4.7E-09 64.0 7.0 69 44-116 15-103 (225)
70 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00025 5.4E-09 60.6 6.2 57 59-116 30-89 (172)
71 cd07383 MPP_Dcr2 Saccharomyces 97.5 0.00033 7.2E-09 61.1 6.8 70 44-113 3-87 (199)
72 PRK10966 exonuclease subunit S 97.3 0.00037 8E-09 67.9 5.8 72 44-116 1-88 (407)
73 TIGR00583 mre11 DNA repair pro 97.3 0.00053 1.2E-08 66.6 6.7 53 44-96 4-68 (405)
74 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00085 1.8E-08 60.6 7.2 67 47-115 2-94 (243)
75 COG1409 Icc Predicted phosphoh 97.2 0.00092 2E-08 60.8 7.4 73 44-118 1-81 (301)
76 cd07401 MPP_TMEM62_N Homo sapi 97.2 0.00077 1.7E-08 61.5 6.3 70 46-115 2-89 (256)
77 COG1408 Predicted phosphohydro 97.1 0.00079 1.7E-08 62.5 5.8 70 45-116 46-119 (284)
78 cd00839 MPP_PAPs purple acid p 97.1 0.00047 1E-08 63.6 3.9 69 44-116 5-82 (294)
79 cd08166 MPP_Cdc1_like_1 unchar 96.9 0.0017 3.6E-08 57.0 5.6 48 67-114 39-92 (195)
80 cd07384 MPP_Cdc1_like Saccharo 96.9 0.0019 4.2E-08 55.3 5.9 53 64-116 39-101 (171)
81 COG4186 Predicted phosphoester 96.8 0.005 1.1E-07 51.7 6.8 67 46-116 6-87 (186)
82 cd00845 MPP_UshA_N_like Escher 96.7 0.0023 5E-08 57.7 5.1 66 45-115 2-82 (252)
83 COG2908 Uncharacterized protei 96.7 0.0055 1.2E-07 54.9 7.1 200 47-278 1-229 (237)
84 cd07380 MPP_CWF19_N Schizosacc 96.7 0.0055 1.2E-07 51.5 6.5 66 47-113 1-68 (150)
85 PF14582 Metallophos_3: Metall 96.4 0.0031 6.7E-08 56.2 3.5 72 44-116 6-103 (255)
86 COG0420 SbcD DNA repair exonuc 96.4 0.0083 1.8E-07 57.9 6.7 73 44-116 1-89 (390)
87 PF08321 PPP5: PPP5 TPR repeat 96.3 0.0082 1.8E-07 46.5 5.2 40 3-42 56-95 (95)
88 cd08164 MPP_Ted1 Saccharomyces 96.1 0.014 2.9E-07 51.2 6.1 66 49-114 22-110 (193)
89 cd07410 MPP_CpdB_N Escherichia 96.1 0.0071 1.5E-07 55.6 4.4 66 45-115 2-95 (277)
90 PLN02533 probable purple acid 95.8 0.011 2.4E-07 58.0 4.6 70 44-116 140-212 (427)
91 cd08163 MPP_Cdc1 Saccharomyces 95.7 0.014 3E-07 53.4 4.6 24 214-237 202-225 (257)
92 COG1407 Predicted ICC-like pho 95.3 0.052 1.1E-06 48.8 6.7 72 42-116 18-111 (235)
93 cd07378 MPP_ACP5 Homo sapiens 95.1 0.045 9.7E-07 49.9 5.9 69 45-115 2-83 (277)
94 PF06874 FBPase_2: Firmicute f 95.1 0.021 4.5E-07 57.7 3.7 60 54-118 167-227 (640)
95 cd07408 MPP_SA0022_N Staphyloc 95.1 0.035 7.7E-07 50.5 5.0 66 45-115 2-82 (257)
96 cd07412 MPP_YhcR_N Bacillus su 94.6 0.032 6.9E-07 51.8 3.6 66 45-115 2-88 (288)
97 cd07411 MPP_SoxB_N Thermus the 94.2 0.08 1.7E-06 48.4 5.3 64 46-115 3-95 (264)
98 KOG0918 Selenium-binding prote 93.6 0.0096 2.1E-07 56.9 -2.1 196 70-277 47-251 (476)
99 cd00842 MPP_ASMase acid sphing 93.3 0.16 3.6E-06 46.8 5.6 72 45-117 39-124 (296)
100 PRK09419 bifunctional 2',3'-cy 92.9 0.12 2.6E-06 57.0 4.7 65 45-114 662-735 (1163)
101 KOG3662 Cell division control 92.8 0.21 4.6E-06 48.4 5.7 47 68-114 91-143 (410)
102 COG1768 Predicted phosphohydro 92.8 0.047 1E-06 47.1 1.1 44 69-116 42-87 (230)
103 COG1311 HYS2 Archaeal DNA poly 92.8 3.3 7.1E-05 41.0 13.8 53 229-286 419-472 (481)
104 cd07409 MPP_CD73_N CD73 ecto-5 92.2 0.23 5.1E-06 45.8 5.1 65 46-115 3-94 (281)
105 cd07387 MPP_PolD2_C PolD2 (DNA 92.2 6 0.00013 36.2 14.1 50 230-284 205-257 (257)
106 KOG2863 RNA lariat debranching 92.2 0.4 8.6E-06 45.6 6.4 73 44-116 1-89 (456)
107 cd07406 MPP_CG11883_N Drosophi 90.9 0.42 9E-06 43.5 5.1 56 54-114 21-82 (257)
108 TIGR00282 metallophosphoestera 89.9 0.71 1.5E-05 42.5 5.7 67 44-115 1-71 (266)
109 cd07407 MPP_YHR202W_N Saccharo 89.5 0.37 8.1E-06 44.6 3.7 66 45-115 7-97 (282)
110 cd08162 MPP_PhoA_N Synechococc 88.9 0.56 1.2E-05 44.1 4.5 64 46-114 3-90 (313)
111 COG3855 Fbp Uncharacterized pr 88.5 0.31 6.6E-06 47.7 2.4 43 70-117 190-232 (648)
112 COG0737 UshA 5'-nucleotidase/2 88.4 0.49 1.1E-05 47.5 3.9 68 43-115 26-115 (517)
113 cd07405 MPP_UshA_N Escherichia 87.7 0.54 1.2E-05 43.5 3.5 65 46-115 3-87 (285)
114 PF04042 DNA_pol_E_B: DNA poly 86.9 1.3 2.8E-05 38.6 5.3 72 46-117 1-93 (209)
115 PRK09420 cpdB bifunctional 2', 86.4 0.72 1.6E-05 47.8 3.8 69 42-115 24-122 (649)
116 TIGR01390 CycNucDiestase 2',3' 86.1 0.73 1.6E-05 47.5 3.7 66 45-115 4-99 (626)
117 PRK09419 bifunctional 2',3'-cy 85.1 0.92 2E-05 50.2 4.1 66 44-114 42-138 (1163)
118 KOG3325 Membrane coat complex 85.0 3 6.5E-05 35.0 6.1 99 46-182 3-107 (183)
119 KOG1432 Predicted DNA repair e 82.1 2 4.4E-05 40.7 4.4 71 45-116 55-148 (379)
120 PRK11907 bifunctional 2',3'-cy 81.9 1.6 3.5E-05 46.3 4.1 67 44-115 116-213 (814)
121 KOG2476 Uncharacterized conser 80.8 3.6 7.8E-05 40.5 5.7 69 43-112 5-75 (528)
122 TIGR01530 nadN NAD pyrophospha 79.6 3 6.6E-05 42.3 5.1 41 70-115 49-94 (550)
123 PRK09558 ushA bifunctional UDP 78.3 2.2 4.7E-05 43.3 3.7 68 43-115 34-121 (551)
124 cd07382 MPP_DR1281 Deinococcus 78.2 4.4 9.6E-05 37.0 5.3 66 45-115 1-70 (255)
125 PTZ00422 glideosome-associated 76.3 3.6 7.9E-05 40.0 4.4 70 45-114 28-108 (394)
126 KOG2310 DNA repair exonuclease 75.0 6.1 0.00013 39.7 5.5 52 44-95 14-77 (646)
127 PRK09418 bifunctional 2',3'-cy 73.4 3.8 8.3E-05 43.4 4.0 68 42-114 38-141 (780)
128 KOG1378 Purple acid phosphatas 71.6 5.1 0.00011 39.5 4.1 33 219-251 323-355 (452)
129 PTZ00235 DNA polymerase epsilo 68.2 14 0.00031 34.3 6.1 72 44-115 28-122 (291)
130 KOG3339 Predicted glycosyltran 65.7 31 0.00067 30.1 7.2 85 72-162 40-140 (211)
131 KOG2679 Purple (tartrate-resis 63.3 7.7 0.00017 35.9 3.3 67 45-115 45-126 (336)
132 KOG3947 Phosphoesterases [Gene 60.4 11 0.00023 34.9 3.7 62 45-116 63-127 (305)
133 PF13258 DUF4049: Domain of un 56.2 50 0.0011 30.0 7.0 57 103-166 128-186 (318)
134 PF02875 Mur_ligase_C: Mur lig 55.2 42 0.00091 24.9 5.7 69 44-112 12-82 (91)
135 PF06874 FBPase_2: Firmicute f 53.0 10 0.00022 38.8 2.5 72 214-286 505-585 (640)
136 TIGR00282 metallophosphoestera 45.5 16 0.00035 33.6 2.4 39 73-115 2-41 (266)
137 cd07382 MPP_DR1281 Deinococcus 42.7 20 0.00043 32.8 2.5 39 73-114 1-39 (255)
138 cd01533 4RHOD_Repeat_2 Member 38.4 1.7E+02 0.0038 22.1 7.3 90 11-110 6-100 (109)
139 COG3855 Fbp Uncharacterized pr 34.5 37 0.00079 33.8 3.0 59 216-274 514-581 (648)
140 PF02609 Exonuc_VII_S: Exonucl 34.3 68 0.0015 21.6 3.6 34 1-35 5-38 (53)
141 COG1692 Calcineurin-like phosp 31.1 60 0.0013 29.6 3.6 11 45-55 2-12 (266)
142 PRK14070 exodeoxyribonuclease 30.6 1.2E+02 0.0027 21.9 4.5 34 1-35 1-34 (69)
143 PRK10773 murF UDP-N-acetylmura 30.3 1.8E+02 0.004 28.5 7.3 67 43-110 324-392 (453)
144 PF12641 Flavodoxin_3: Flavodo 25.5 3.1E+02 0.0068 23.0 6.9 53 47-99 2-67 (160)
145 PRK04531 acetylglutamate kinas 23.4 1.2E+02 0.0027 29.5 4.5 23 142-164 54-76 (398)
146 PRK14066 exodeoxyribonuclease 23.2 1.4E+02 0.0031 21.9 3.8 33 2-35 11-43 (75)
147 TIGR01143 murF UDP-N-acetylmur 22.0 3.3E+02 0.0072 26.2 7.3 67 44-111 296-364 (417)
148 PF09637 Med18: Med18 protein; 20.8 1.1E+02 0.0024 27.7 3.4 72 216-290 139-213 (250)
149 KOG2463 Predicted RNA-binding 20.6 2.3E+02 0.0049 27.0 5.4 81 211-292 207-294 (376)
150 PF09949 DUF2183: Uncharacteri 20.5 3.1E+02 0.0068 21.1 5.5 34 68-107 61-94 (100)
151 KOG3425 Uncharacterized conser 20.4 3.6E+02 0.0078 21.9 5.8 58 56-114 12-78 (128)
152 PF02885 Glycos_trans_3N: Glyc 20.2 1.5E+02 0.0033 20.7 3.4 26 4-29 2-27 (66)
153 TIGR00550 nadA quinolinate syn 20.2 2.1E+02 0.0045 27.0 5.2 35 44-81 29-63 (310)
154 PRK00977 exodeoxyribonuclease 20.2 1.8E+02 0.0039 21.6 3.9 33 2-35 17-49 (80)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-90 Score=599.61 Aligned_cols=303 Identities=82% Similarity=1.413 Sum_probs=296.5
Q ss_pred ccHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCccc
Q 021939 2 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFV 81 (305)
Q Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~v 81 (305)
+++|..|+++++.+.+++.++..||.++.+||.+|+|+..++.|++|+||||||++||..+|+..|.++.++|+||||||
T Consensus 1 ~dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyV 80 (303)
T KOG0372|consen 1 SDLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYV 80 (303)
T ss_pred CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchh
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEec
Q 021939 82 DRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVH 161 (305)
Q Consensus 82 DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vH 161 (305)
|||..|+|++.+|+.||.+||++|.+||||||++.++..|||++||.++||+..+|+.+.+.|++||++|+|++++||||
T Consensus 81 DRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVH 160 (303)
T KOG0372|consen 81 DRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVH 160 (303)
T ss_pred ccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceec
Q 021939 162 GGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVME 241 (305)
Q Consensus 162 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~ 241 (305)
||+||+++++|||+.+.|.+++|+++.++|+|||||.+ .++|+.||||.|++||++++++|++.||+.+|+|+||.+.+
T Consensus 161 GGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee-~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~e 239 (303)
T KOG0372|consen 161 GGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEE-GPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVME 239 (303)
T ss_pred CCCCcchhhHHHHHHhhccccCCCCCcchheeccCccc-CCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998 67999999999999999999999999999999999999999
Q ss_pred ceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCCCCCCCC
Q 021939 242 GYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQESRGAPAKKPAPDYFL 305 (305)
Q Consensus 242 G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (305)
||++.|+++++|||||||||++++|.||||.++++....|..|++.|...+..+.++.+.+||+
T Consensus 240 Gyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 240 GYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred hHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 9999999999999999999999999999999999999999999999999887777777889986
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-80 Score=529.20 Aligned_cols=301 Identities=64% Similarity=1.227 Sum_probs=290.8
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccC
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVD 82 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vD 82 (305)
++|+.|+.++.++-++++++..||+.++++|..|.|+..++.|+.|+|||||++.||.++++..|..|++.|+|+|||||
T Consensus 5 d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 5 DLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred CHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecC
Q 021939 83 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHG 162 (305)
Q Consensus 83 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHg 162 (305)
||..|+|++.+|+.||.+||.+|.+||||||.+.+...|||++||..+||+...|+.+.+.|+.|+++|+|+++++||||
T Consensus 85 RGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHG 164 (306)
T KOG0373|consen 85 RGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHG 164 (306)
T ss_pred cccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecc
Q 021939 163 GLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEG 242 (305)
Q Consensus 163 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G 242 (305)
|+||++.++|||+-+.|.+++|+++..+|++||||++ .+.|..||||.|++||++.+.+|...|++++|.|+||.+.+|
T Consensus 165 GLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 165 GLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 9999999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred eEEecCCe-EEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCCCCCCCC
Q 021939 243 YKWMFNNQ-IVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQESRGAPAKKPAPDYFL 305 (305)
Q Consensus 243 ~~~~~~~~-~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (305)
|+++|++| ++|||||||||++++|.||||.++++++.+++.|.+.|..+|-.+. +...+|||
T Consensus 244 ~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~-r~~~pYFl 306 (306)
T KOG0373|consen 244 FKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPP-RTRAPYFL 306 (306)
T ss_pred HHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCC-CCCCCCcC
Confidence 99999888 9999999999999999999999999999999999999988664333 44556775
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.7e-76 Score=546.71 Aligned_cols=288 Identities=61% Similarity=1.130 Sum_probs=277.1
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccC
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVD 82 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vD 82 (305)
+++.+|+.+.+++.++++++.+||++|+++|++||++++++.|++|+||||||+.+|.++++..+.++.++|+|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 48999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecC
Q 021939 83 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHG 162 (305)
Q Consensus 83 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHg 162 (305)
||++|+||+.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|+.+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecc
Q 021939 163 GLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEG 242 (305)
Q Consensus 163 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G 242 (305)
|++|.+.++++++.++|+.++|.++.++|++||||.. ..+|.+++||.|++||++++++||++||+++||||||++++|
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G 240 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEG 240 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccc
Confidence 9999999999999999999999999999999999986 678999999999999999999999999999999999999999
Q ss_pred eEEecCC-eEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCCC
Q 021939 243 YKWMFNN-QIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQES 291 (305)
Q Consensus 243 ~~~~~~~-~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~ 291 (305)
|++.+++ +|+||||||+||+..+|+||||.++++.+++|++|+|.|.+.
T Consensus 241 ~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 241 YKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESA 290 (303)
T ss_pred eEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCccc
Confidence 9987654 599999999999999999999999999999999999998763
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.8e-76 Score=543.46 Aligned_cols=285 Identities=79% Similarity=1.410 Sum_probs=276.4
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccC
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVD 82 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vD 82 (305)
+++.+++++.+++.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+|||||||
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecC
Q 021939 83 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHG 162 (305)
Q Consensus 83 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHg 162 (305)
||++|+||+.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|+.+.++|++||++++++++++||||
T Consensus 81 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHg 160 (285)
T cd07415 81 RGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHG 160 (285)
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecc
Q 021939 163 GLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEG 242 (305)
Q Consensus 163 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G 242 (305)
||+|.+.++++++.++|+.+.+.++.+.|++||||.. ..+|.+++||.|++||++++++||++||+++||||||++++|
T Consensus 161 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G 239 (285)
T cd07415 161 GLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDD-IEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEG 239 (285)
T ss_pred CCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCc-cCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccce
Confidence 9999999999999999999999999999999999997 488999999999999999999999999999999999999999
Q ss_pred eEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCC
Q 021939 243 YKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAP 288 (305)
Q Consensus 243 ~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~ 288 (305)
|++.++++|+||||||+||+..+|+||||.|+++++++|++|+|.|
T Consensus 240 ~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 240 YQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=8.7e-76 Score=545.93 Aligned_cols=282 Identities=35% Similarity=0.603 Sum_probs=261.1
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecC----CcceeeccCCCHHHHHHHHHhcCCCC-CcEEEEe
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDA----PVTICGDIHGQFYDMKELFKVGGDCP-KTNYLFL 77 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~----~i~viGDIHG~~~~L~~il~~~~~~~-~~~~vfL 77 (305)
.++.+|+++.+++.++++++.+||++|+++|++||++++++. |++||||||||+++|.++|+..+.++ .++|+||
T Consensus 6 ~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFL 85 (321)
T cd07420 6 HIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFN 85 (321)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEe
Confidence 589999999999999999999999999999999999999986 89999999999999999999988774 5789999
Q ss_pred CcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCC--cccccccchhhhccccchheec
Q 021939 78 GDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--VNVWRYCTDIFDYLSLSALIEN 155 (305)
Q Consensus 78 GD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~~LP~~~~i~~ 155 (305)
|||||||++|+||+.+|++||+.||+++++||||||.+.++..|||.+|+..+|+. ..+|+.+.++|++||+++++++
T Consensus 86 GDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~ 165 (321)
T cd07420 86 GDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDN 165 (321)
T ss_pred ccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcC
Confidence 99999999999999999999999999999999999999999999999999999974 6799999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhhhhccccc-----cCC----------------------CCccccccccCCCCCCCCCCCCC
Q 021939 156 KIFSVHGGLSPAISTLDQIRTIDRKQE-----VPH----------------------DGAMCDLLWSDPEDIVDGWGLSP 208 (305)
Q Consensus 156 ~il~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~~~~~~~~~~ 208 (305)
++|||||||+| ..++++|+.|+|+.. +|. .+.+.|+|||||......|.+++
T Consensus 166 ~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~ 244 (321)
T cd07420 166 KILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTF 244 (321)
T ss_pred CEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCC
Confidence 99999999997 568999999987421 111 03578999999997555588889
Q ss_pred CCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEe
Q 021939 209 RGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFD 285 (305)
Q Consensus 209 rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~ 285 (305)
||.|++||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||||.|+++++++|++|.
T Consensus 245 RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 245 RGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred CCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999884
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.7e-75 Score=543.20 Aligned_cols=288 Identities=47% Similarity=0.926 Sum_probs=276.4
Q ss_pred ccHHHHHHHHhhCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcE
Q 021939 2 SDLDRQIEQLKKCE--------PLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTN 73 (305)
Q Consensus 2 ~~~~~~i~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~ 73 (305)
.+++.+|+++.+.. .++++++.+||++|+++|++||++++++.|++|||||||++.+|.++++..+.++.++
T Consensus 9 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ 88 (320)
T PTZ00480 9 IDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESN 88 (320)
T ss_pred cCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcce
Confidence 36899999998654 5899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchhe
Q 021939 74 YLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALI 153 (305)
Q Consensus 74 ~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i 153 (305)
|||||||||||++|+||+.+++++|..+|.++++||||||.+.++..|||..|+..+|+ ..+|+.+.+.|++||++|++
T Consensus 89 ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 89 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred EEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhhee
Confidence 99999999999999999999999999999999999999999999999999999999994 67999999999999999999
Q ss_pred eccEEEecCCCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEE
Q 021939 154 ENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYIC 233 (305)
Q Consensus 154 ~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~ii 233 (305)
++++|||||||+|.+.++++|+.++||.+.+.++.+.|+|||||.....+|.+++||.|++||++++++||++||+++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 99999999999999999999999999999999999999999999976789999999999999999999999999999999
Q ss_pred ecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCC
Q 021939 234 RAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQE 290 (305)
Q Consensus 234 rgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 290 (305)
||||++++||++.++++|+||||||+||+..+|+||+|.|+++++++|++|+|.+.+
T Consensus 248 R~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 248 RAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred EcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 999999999999999999999999999999999999999999999999999987655
No 7
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.8e-74 Score=532.80 Aligned_cols=285 Identities=40% Similarity=0.792 Sum_probs=273.3
Q ss_pred CccHHHHHHHHhhCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCc
Q 021939 1 MSDLDRQIEQLKKCE--------PLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKT 72 (305)
Q Consensus 1 ~~~~~~~i~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~ 72 (305)
|+-+|.+|+++.+.. .++++++.+||++++++|++||++++++.|++|+||||||+.+|.++|+..+.++.+
T Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~ 80 (294)
T PTZ00244 1 MSLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYS 80 (294)
T ss_pred CchHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcc
Confidence 788899999998643 589999999999999999999999999999999999999999999999999999899
Q ss_pred EEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchh
Q 021939 73 NYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAL 152 (305)
Q Consensus 73 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~ 152 (305)
+|+|||||||||++|+||+.+++++|..+|.+++++|||||.+.++..|||..|+..+|+ ..+|+.+.++|++||++++
T Consensus 81 ~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaai 159 (294)
T PTZ00244 81 NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCV 159 (294)
T ss_pred cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheE
Confidence 999999999999999999999999999999999999999999999999999999999995 6789999999999999999
Q ss_pred eeccEEEecCCCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEE
Q 021939 153 IENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYI 232 (305)
Q Consensus 153 i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~i 232 (305)
++++++|||||++|.+.++++++.++|+.+.+..+.+.|++||||.....+|.+++||.|++||++++++||++||+++|
T Consensus 160 i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~i 239 (294)
T PTZ00244 160 ISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLI 239 (294)
T ss_pred ecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEE
Confidence 99999999999999999999999999999989899999999999997678999999999999999999999999999999
Q ss_pred EecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEec
Q 021939 233 CRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDA 286 (305)
Q Consensus 233 irgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 286 (305)
|||||++++||++.++++|+||||||+||+..+|+||||.|+++.+++|++|.+
T Consensus 240 iR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 240 VRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred EEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999999998865
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=4.8e-74 Score=530.51 Aligned_cols=283 Identities=48% Similarity=0.966 Sum_probs=271.6
Q ss_pred HHHHHHHHhhCC--------CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEE
Q 021939 4 LDRQIEQLKKCE--------PLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYL 75 (305)
Q Consensus 4 ~~~~i~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~v 75 (305)
++++|+++.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 678888888654 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheec
Q 021939 76 FLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIEN 155 (305)
Q Consensus 76 fLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~ 155 (305)
|||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999994 6789999999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEec
Q 021939 156 KIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRA 235 (305)
Q Consensus 156 ~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirg 235 (305)
+++|||||++|.+.++++|+.++|+.+.+..+.+.|++||||.....+|.+|+||.|++||++++++||++||+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999999899999999999997778999999999999999999999999999999999
Q ss_pred ccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecC
Q 021939 236 HQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAA 287 (305)
Q Consensus 236 H~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 287 (305)
||++++||++.++++|+||||||+||+..+|+||||.|+++++++|++|+|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999854
No 9
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.2e-73 Score=530.84 Aligned_cols=288 Identities=42% Similarity=0.760 Sum_probs=272.1
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccC
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVD 82 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vD 82 (305)
.++.+++++++++.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecC
Q 021939 83 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHG 162 (305)
Q Consensus 83 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHg 162 (305)
||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+| ...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999999 467899999999999999999999999999
Q ss_pred CCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCC------CCCCC-CCCceEEeCchhhhhchhcCCceEEEec
Q 021939 163 GLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVD------GWGLS-PRGAGFLFGGSVVTSFNHSNNIDYICRA 235 (305)
Q Consensus 163 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~------~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iirg 235 (305)
|++|.+.++++|++++|+.+.+..+.++|+|||||..... +|.++ +||.|++||++++++||++||+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 9999999999999999999988899999999999975332 47665 8999999999999999999999999999
Q ss_pred ccceecceEEecCC------eEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCCCC
Q 021939 236 HQLVMEGYKWMFNN------QIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQESR 292 (305)
Q Consensus 236 H~~~~~G~~~~~~~------~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~ 292 (305)
||++++||++.+++ +|+||||||+||+..+|+||||.|+++ ..+|++|++.||-+-
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~~ 302 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPYW 302 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCCC
Confidence 99999999998876 999999999999999999999999987 579999999998643
No 10
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.6e-74 Score=537.00 Aligned_cols=272 Identities=48% Similarity=0.918 Sum_probs=266.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcC-CCCCcEEEEeCcccCCCCChHHHHHHH
Q 021939 16 PLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGG-DCPKTNYLFLGDFVDRGFYSVETFLLL 94 (305)
Q Consensus 16 ~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l 94 (305)
.++++++.+||..+.+++..+|+++++++||.|+|||||++.||.+++...+ .|++++|+|||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4899999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCCCCChhhh
Q 021939 95 LALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQI 174 (305)
Q Consensus 95 ~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i 174 (305)
+++|++||+++++||||||.+.++..|||++||.++|+...+|..|++.|++||++++|+++++|+|||++|.+.++++|
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997678999999999999999999999999999999999999999
Q ss_pred hhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEE
Q 021939 175 RTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTV 254 (305)
Q Consensus 175 ~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~iti 254 (305)
+.|.||.+++..++++|++||||.....+|.+|.||.++.||++++++||+++++++|+||||++.+||+++.+++++||
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTI 270 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTI 270 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEE
Confidence 99999999999999999999999987899999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCccCCCeEEEEEEcCCCCeEEEEEecC
Q 021939 255 WSAPNYCYRCGNVAAILELDENLNKQFRVFDAA 287 (305)
Q Consensus 255 fSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 287 (305)
||||+||+.+.|.||||.+++++.++|..+.|.
T Consensus 271 FSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 271 FSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred ecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999999999999999999999995
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.4e-73 Score=530.18 Aligned_cols=286 Identities=40% Similarity=0.744 Sum_probs=271.1
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCC----cceeeccCCCHHHHHHHHHhcCCCC-CcEEEEe
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAP----VTICGDIHGQFYDMKELFKVGGDCP-KTNYLFL 77 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~----i~viGDIHG~~~~L~~il~~~~~~~-~~~~vfL 77 (305)
.++.+++++++++.++++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..+.++ .++|+||
T Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFL 94 (316)
T cd07417 15 FVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFN 94 (316)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEE
Confidence 4789999999999999999999999999999999999999866 9999999999999999999988764 4689999
Q ss_pred CcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccE
Q 021939 78 GDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKI 157 (305)
Q Consensus 78 GD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~i 157 (305)
|||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|+.+.++|++||+++++++++
T Consensus 95 GDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~~~ 173 (316)
T cd07417 95 GDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLINGKV 173 (316)
T ss_pred eeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeCCeE
Confidence 9999999999999999999999999999999999999999999999999999994 578999999999999999999999
Q ss_pred EEecCCC-CCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecc
Q 021939 158 FSVHGGL-SPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAH 236 (305)
Q Consensus 158 l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH 236 (305)
+|||||+ +|...+++++++++|+.+.+.++.+.|+|||||.+ ..+|.+++||.|+.||++++++||++||+++|||||
T Consensus 174 ~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 252 (316)
T cd07417 174 LVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQP-QPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSH 252 (316)
T ss_pred EEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCC-CCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECC
Confidence 9999999 56788999999999999888889999999999997 568999999999999999999999999999999999
Q ss_pred cceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcC-CCCeEEEEEecCCCC
Q 021939 237 QLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDE-NLNKQFRVFDAAPQE 290 (305)
Q Consensus 237 ~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~-~~~~~~~~~~~~~~~ 290 (305)
|++++||++.++++|+|||||||||+..+|+||+|.|++ +++++|++|++.|+.
T Consensus 253 e~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 253 EVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred cccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999 899999999998765
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.5e-72 Score=511.71 Aligned_cols=270 Identities=51% Similarity=0.939 Sum_probs=260.5
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHh
Q 021939 17 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLA 96 (305)
Q Consensus 17 ~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 96 (305)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|+|||||||||++|+||+.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCCCCChhhhhh
Q 021939 97 LKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRT 176 (305)
Q Consensus 97 lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i~~ 176 (305)
+|..+|.++++||||||.+.++..+||.+|+..+|+ ..+|+.+.++|++||++++++++++|||||++|.+.++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999999999999999999999999999
Q ss_pred hccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEc
Q 021939 177 IDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWS 256 (305)
Q Consensus 177 i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifS 256 (305)
++|+.+.+.++.+.|++||||.....+|.+|+||.++.||++++++||++||+++||||||++++||++.++++|+||||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 99999888899999999999986678999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCeEEEEEEcCCCCeEEEEEecC
Q 021939 257 APNYCYRCGNVAAILELDENLNKQFRVFDAA 287 (305)
Q Consensus 257 a~~y~~~~~N~~avl~i~~~~~~~~~~~~~~ 287 (305)
||+||+..+|+||+|.++++++++|++|++.
T Consensus 240 a~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 240 APNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999998999999999999999999999764
No 13
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-71 Score=485.73 Aligned_cols=301 Identities=65% Similarity=1.182 Sum_probs=290.1
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccC
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVD 82 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vD 82 (305)
.++..|+++.+++++++.++..+|+.|+++|++|.++..+..|++|+||+|||+++|.++++..|..++..|+|+|||||
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecc
Confidence 57888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecC
Q 021939 83 RGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHG 162 (305)
Q Consensus 83 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHg 162 (305)
||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.++||+...|..|.+.|+++|+.++|++++||.||
T Consensus 99 rGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HG 178 (319)
T KOG0371|consen 99 RGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHG 178 (319)
T ss_pred cccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecc
Q 021939 163 GLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEG 242 (305)
Q Consensus 163 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G 242 (305)
|++|.+.+++.++.++|.+++|+++.++|+|||||+. ..+|..++||.++.||.+..++|-.+||+++|-|+||.+.+|
T Consensus 179 gLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g 257 (319)
T KOG0371|consen 179 GLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEG 257 (319)
T ss_pred CcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcc
Confidence 9999999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred eEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCCCCCCCCCCCCCCCCC
Q 021939 243 YKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQESRGAPAKKPAPDYFL 305 (305)
Q Consensus 243 ~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (305)
|.+.+...++|||||||||++++|.+|++.++++....|.+|+|+|..-.. ...+..|||||
T Consensus 258 ~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~-~vtr~tpDYfL 319 (319)
T KOG0371|consen 258 YNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEP-DVTRKTPDYFL 319 (319)
T ss_pred cceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcccccc-ccccCCCCCcC
Confidence 999999999999999999999999999999999999999999998755332 34577899997
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.4e-68 Score=498.74 Aligned_cols=272 Identities=42% Similarity=0.727 Sum_probs=253.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCC--------cEEEEeCcccCCCCC
Q 021939 15 EPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPK--------TNYLFLGDFVDRGFY 86 (305)
Q Consensus 15 ~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~--------~~~vfLGD~vDrG~~ 86 (305)
..++++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..+.++. .+|||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 368999999999999999999999999999999999999999999999998887643 579999999999999
Q ss_pred hHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCC-----cccccccchhhhccccchheeccEEEec
Q 021939 87 SVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS-----VNVWRYCTDIFDYLSLSALIENKIFSVH 161 (305)
Q Consensus 87 s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-----~~~~~~~~~~f~~LP~~~~i~~~il~vH 161 (305)
|+||+.+|++|+..+|.++++||||||.+.++..+||..++..+|+. ..+|+.+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999998865 3588999999999999999999999999
Q ss_pred CCCCCCCCChhhhhhhcccc-ccCCCCccccccccCCCCC--CCCCCCCC---CCce--EEeCchhhhhchhcCCceEEE
Q 021939 162 GGLSPAISTLDQIRTIDRKQ-EVPHDGAMCDLLWSDPEDI--VDGWGLSP---RGAG--FLFGGSVVTSFNHSNNIDYIC 233 (305)
Q Consensus 162 gGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~--~~~~~~~~---rg~~--~~fG~~~~~~fl~~~~~~~ii 233 (305)
||++|.+.++++++.+.|+. ..+..+.+.|++||||... ..+|.+++ ||.| +.||++++++||++||+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999987 4456678899999999863 35677766 9888 799999999999999999999
Q ss_pred ecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEec
Q 021939 234 RAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDA 286 (305)
Q Consensus 234 rgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~ 286 (305)
||||++++||++.++++|+||||||+||+.++|.|||+.|+++.++++++++|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999876
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.8e-68 Score=503.98 Aligned_cols=284 Identities=37% Similarity=0.635 Sum_probs=256.2
Q ss_pred cHHHHHHHHhhC----------CCCCHHHHHHHHHHHHHHHhhCCCeeeec----CCcceeeccCCCHHHHHHHHHhcCC
Q 021939 3 DLDRQIEQLKKC----------EPLKESEVKALCLKAMEILVEESNVQRVD----APVTICGDIHGQFYDMKELFKVGGD 68 (305)
Q Consensus 3 ~~~~~i~~~~~~----------~~~~~~~~~~l~~~~~~il~~ep~l~~i~----~~i~viGDIHG~~~~L~~il~~~~~ 68 (305)
.++.+|+.++.. ..++.+++.+||++|+++|++||++++++ .|++|||||||++.+|.++|+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~ 90 (377)
T cd07418 11 WVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGF 90 (377)
T ss_pred HHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCC
Confidence 367788888655 35799999999999999999999999998 7899999999999999999998887
Q ss_pred CCC-cEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCC--cccccccchhhh
Q 021939 69 CPK-TNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--VNVWRYCTDIFD 145 (305)
Q Consensus 69 ~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~ 145 (305)
++. ++|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..+||..|+..+|+. ..+|+.+.++|+
T Consensus 91 ~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~ 170 (377)
T cd07418 91 PDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFE 170 (377)
T ss_pred CCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHH
Confidence 764 56999999999999999999999999999999999999999999999999999999999975 368999999999
Q ss_pred ccccchheeccEEEecCCC---------------------------CCCCCChhhhhhhccc-cccCCCC---ccccccc
Q 021939 146 YLSLSALIENKIFSVHGGL---------------------------SPAISTLDQIRTIDRK-QEVPHDG---AMCDLLW 194 (305)
Q Consensus 146 ~LP~~~~i~~~il~vHgGi---------------------------~p~~~~~~~i~~i~r~-~~~~~~~---~~~dllW 194 (305)
+||+++++++++||||||| +|.+.++++|+.++|+ .+++..+ +++|+||
T Consensus 171 ~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLW 250 (377)
T cd07418 171 GLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLW 250 (377)
T ss_pred hCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEe
Confidence 9999999999999999999 4456789999999997 4565554 4689999
Q ss_pred cCCCCCCCCCCCC-CCCceEEeCchhhhhchhcCCceEEEecccc------------eecceEEecC---CeEEEEEcCC
Q 021939 195 SDPEDIVDGWGLS-PRGAGFLFGGSVVTSFNHSNNIDYICRAHQL------------VMEGYKWMFN---NQIVTVWSAP 258 (305)
Q Consensus 195 sdp~~~~~~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~------------~~~G~~~~~~---~~~itifSa~ 258 (305)
|||.. ..+|.++ +||.|++||++++++||++|++++||||||+ +++||++.++ ++|+||||||
T Consensus 251 SDP~~-~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~ 329 (377)
T cd07418 251 SDPSL-TPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAP 329 (377)
T ss_pred eCCcc-CCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCC
Confidence 99997 4666665 7999999999999999999999999999996 6799999887 9999999999
Q ss_pred CCC------ccCCCeEEEEEEcCCC--CeEEEEEecC
Q 021939 259 NYC------YRCGNVAAILELDENL--NKQFRVFDAA 287 (305)
Q Consensus 259 ~y~------~~~~N~~avl~i~~~~--~~~~~~~~~~ 287 (305)
||| +.++|+||++.++.+. +.+|.+|+++
T Consensus 330 nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 330 DYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred ccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 999 5789999999997664 7999999998
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.8e-69 Score=490.05 Aligned_cols=285 Identities=42% Similarity=0.761 Sum_probs=268.5
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCC
Q 021939 4 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDR 83 (305)
Q Consensus 4 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDr 83 (305)
.+.+-+++.+.+.++++..+.|+.++..+|++|++++++++||.|+||||||+.||+++++..|.|..++|+||||||||
T Consensus 48 ~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDR 127 (517)
T KOG0375|consen 48 HDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 127 (517)
T ss_pred hHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeecccccc
Confidence 56777888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCC
Q 021939 84 GFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGG 163 (305)
Q Consensus 84 G~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgG 163 (305)
|..|+||+.+|.+||+.||..+++||||||++.+...+.|..||..+| +..+|+.+++.|+.||+|++.+++++|||||
T Consensus 128 GyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGG 206 (517)
T KOG0375|consen 128 GYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGG 206 (517)
T ss_pred ceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCC
Confidence 999999999999999999999999999999999999999999999999 7799999999999999999999999999999
Q ss_pred CCCCCCChhhhhhhccccccCCCCccccccccCCCCCC------CCCC-CCCCCceEEeCchhhhhchhcCCceEEEecc
Q 021939 164 LSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIV------DGWG-LSPRGAGFLFGGSVVTSFNHSNNIDYICRAH 236 (305)
Q Consensus 164 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~------~~~~-~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH 236 (305)
+||.+.++++|+.++|+.++|.-+.+||+|||||.+.. +.|. ++.||+++.|.-.++.+||+.||+--|||+|
T Consensus 207 lSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAH 286 (517)
T KOG0375|consen 207 LSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAH 286 (517)
T ss_pred CCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhh
Confidence 99999999999999999999999999999999997422 2233 4579999999999999999999999999999
Q ss_pred cceecceEEecCC------eEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCCCC
Q 021939 237 QLVMEGYKWMFNN------QIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQE 290 (305)
Q Consensus 237 ~~~~~G~~~~~~~------~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~~~ 290 (305)
|.+..||+..... .+|||||||||-+.++|+||||+...| ..++.||.++||-
T Consensus 287 EAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHP 345 (517)
T KOG0375|consen 287 EAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCC
Confidence 9999999976544 589999999999999999999999855 7899999999976
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-58 Score=426.78 Aligned_cols=285 Identities=33% Similarity=0.620 Sum_probs=258.9
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeec----CCcceeeccCCCHHHHHHHHHhcCCCCCc-EEEEe
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVD----APVTICGDIHGQFYDMKELFKVGGDCPKT-NYLFL 77 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~----~~i~viGDIHG~~~~L~~il~~~~~~~~~-~~vfL 77 (305)
.++.+|+.++..+.+++..++.|+.+|+++|++-|++-+++ ..+.|+||+||.++||.-+|-+.|.|..+ .|||.
T Consensus 120 ~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFN 199 (631)
T KOG0377|consen 120 HIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFN 199 (631)
T ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeec
Confidence 58999999999999999999999999999999999999985 45999999999999999999999988654 69999
Q ss_pred CcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCC--cccccccchhhhccccchheec
Q 021939 78 GDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--VNVWRYCTDIFDYLSLSALIEN 155 (305)
Q Consensus 78 GD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~~LP~~~~i~~ 155 (305)
||+||||.+|+|||..|+++-+.||..+++-|||||..++|-.|||.+|...+|.. ..+.+.+.++|+|||++.+++.
T Consensus 200 GDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~ 279 (631)
T KOG0377|consen 200 GDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDS 279 (631)
T ss_pred CchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999953 5677889999999999999999
Q ss_pred cEEEecCCCCCCCCChhhhhhhcccc-----ccCC----C-------------CccccccccCCCCCCCCCCCCCCCceE
Q 021939 156 KIFSVHGGLSPAISTLDQIRTIDRKQ-----EVPH----D-------------GAMCDLLWSDPEDIVDGWGLSPRGAGF 213 (305)
Q Consensus 156 ~il~vHgGi~p~~~~~~~i~~i~r~~-----~~~~----~-------------~~~~dllWsdp~~~~~~~~~~~rg~~~ 213 (305)
++|+||||+|. .+.++-+.+|+|.. .+|. + ..+-|++||||......|.+.-||.|+
T Consensus 280 ~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~ 358 (631)
T KOG0377|consen 280 RILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGC 358 (631)
T ss_pred ceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcc
Confidence 99999999975 45666677776532 1111 1 145689999999877788888999999
Q ss_pred EeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCCCeEEEEEecCC
Q 021939 214 LFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAP 288 (305)
Q Consensus 214 ~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~~~~~~~~~~~~ 288 (305)
+||++.+..||++.+++++||+|||.++||++.++++|+|||||+||....+|+||.+++.....+.|+||.+..
T Consensus 359 yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k 433 (631)
T KOG0377|consen 359 YFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAK 433 (631)
T ss_pred eeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999888999999999999999999999764
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8.5e-52 Score=392.17 Aligned_cols=286 Identities=40% Similarity=0.749 Sum_probs=264.6
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCC----cceeeccCCCHHHHHHHHHhcCCCCC-cEEEEeCc
Q 021939 5 DRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAP----VTICGDIHGQFYDMKELFKVGGDCPK-TNYLFLGD 79 (305)
Q Consensus 5 ~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~----i~viGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD 79 (305)
..+.+.+.+...++...+-.|+.++.+++.++|++++++.| +.++||.||++.++.+++...|.|+. ..++|.||
T Consensus 171 k~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngd 250 (476)
T KOG0376|consen 171 KTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGD 250 (476)
T ss_pred HHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCc
Confidence 34444556677889999999999999999999999998754 89999999999999999999998865 46999999
Q ss_pred ccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEE
Q 021939 80 FVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFS 159 (305)
Q Consensus 80 ~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~ 159 (305)
++|||..|.|+...++..|+.+|+++|++|||||...++..|||.+++..+|+ ...+..+.+.|.+||++..++++++.
T Consensus 251 fv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~~~~~ 329 (476)
T KOG0376|consen 251 FVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINNKVLV 329 (476)
T ss_pred eeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcCceEE
Confidence 99999999999999999999999999999999999999999999999999995 45556666999999999999999999
Q ss_pred ecCCC-CCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccc
Q 021939 160 VHGGL-SPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQL 238 (305)
Q Consensus 160 vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~ 238 (305)
+|||+ +|+-..++++++|.|+..+++++..++++||||.. ..+.++|.||.|..||.+++.+||+.|++++|||||++
T Consensus 330 ~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~-~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 330 MHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQP-ANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred EecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCcc-ccCCCccccCceeeeCCCchhhHHhhcchHHHhhcccc
Confidence 99998 55667899999999998899999999999999998 78999999999999999999999999999999999999
Q ss_pred eecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEc-CCCCeEEEEEecCCCCCC
Q 021939 239 VMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELD-ENLNKQFRVFDAAPQESR 292 (305)
Q Consensus 239 ~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~~~~~~~~~ 292 (305)
...||+..++|+|+|||||||||+..+|.||++.++ .+.+.++++|++.||...
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~ 463 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDV 463 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCC
Confidence 999999999999999999999999999999999998 678999999999998744
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.1e-36 Score=270.91 Aligned_cols=215 Identities=45% Similarity=0.726 Sum_probs=177.4
Q ss_pred ceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHH
Q 021939 47 TICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 126 (305)
Q Consensus 47 ~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 126 (305)
+|||||||++++|.++++..+..+.+++|||||+||||+.+.+++.++.+++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999998888999999999999999999999999999877 8899999999999988766655433
Q ss_pred H--------HHhhCCcccccccchhhhccccchheec-cEEEecCCCCCCCCChhhhhhhccccccCCCCccccccccCC
Q 021939 127 C--------LRKYGSVNVWRYCTDIFDYLSLSALIEN-KIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDP 197 (305)
Q Consensus 127 ~--------~~~~~~~~~~~~~~~~f~~LP~~~~i~~-~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 197 (305)
. ...+.....+....+++..||++..++. +++|||||++|.+...++.. ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 1223234567778899999999998876 89999999999876555433 2334456789999998
Q ss_pred CCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEE
Q 021939 198 EDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILE 272 (305)
Q Consensus 198 ~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~ 272 (305)
.........++++. |+++...|+..++.+.|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 86444444455554 999999999999999999999999999876678899999999999877777776654
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=3.4e-27 Score=213.77 Aligned_cols=123 Identities=20% Similarity=0.342 Sum_probs=97.2
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCC---------CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcch
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGD---------CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~---------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
|+++||||||||++.|.++|+..+. +..+++|||||||||||+|.+||++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 5689999999999999999998765 357899999999999999999999999885 34689999999999
Q ss_pred hhhhhhcC-------ChHHHHHhhCC------cccccccchhhhccccchhe-eccEEEecCCCCCCC
Q 021939 115 RQITQVYG-------FYDECLRKYGS------VNVWRYCTDIFDYLSLSALI-ENKIFSVHGGLSPAI 168 (305)
Q Consensus 115 ~~~~~~~g-------f~~e~~~~~~~------~~~~~~~~~~f~~LP~~~~i-~~~il~vHgGi~p~~ 168 (305)
++++...+ ...+....|.. ..+.+.+.++++.||++..+ .++++|||||++|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 88764322 11223334421 23456778889999998876 367999999998863
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=2.5e-26 Score=203.29 Aligned_cols=177 Identities=19% Similarity=0.254 Sum_probs=129.0
Q ss_pred ceeeccCCCHHHHHHHHHhcCC--------CCCcEEEEeCcccCCCCChHHHHHHHHhchhhC---CCcEEEECCCcchh
Q 021939 47 TICGDIHGQFYDMKELFKVGGD--------CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRY---PDRITLIRGNHESR 115 (305)
Q Consensus 47 ~viGDIHG~~~~L~~il~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~---p~~v~~lrGNHE~~ 115 (305)
+||||||||+++|.++|+..+. .+.+.++++||+||||+++.+|+++|++++..+ +.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 6899999999999999988763 467899999999999999999999999997543 46799999999999
Q ss_pred hhhhhcCChH--HHHHhhC----Ccccc---cccchhhhccccchheeccEEEecCCCCCCCCChhhhhhhccccccCCC
Q 021939 116 QITQVYGFYD--ECLRKYG----SVNVW---RYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHD 186 (305)
Q Consensus 116 ~~~~~~gf~~--e~~~~~~----~~~~~---~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 186 (305)
.++..+.+.. +...... ....+ ..+.++++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443321 1111000 01122 33467899999988876 58889999944
Q ss_pred CccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCC
Q 021939 187 GAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAP 258 (305)
Q Consensus 187 ~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~ 258 (305)
+|++.-....... --|...+.++++.++.+++|+||++++.|....+++++++|.++.
T Consensus 140 ------~w~r~y~~~~~~~--------~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKETSDK--------ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhhhhc--------cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 3332100000000 001246778899999999999999999887668899999999853
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=4.9e-25 Score=202.31 Aligned_cols=125 Identities=22% Similarity=0.273 Sum_probs=99.2
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCC-CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGD-CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
|+++||||||||++.|.++|+..+. +..++++||||+|||||+|.+|++++.++. .++++|+||||.+++...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 5789999999999999999998764 567899999999999999999999999873 47999999999998876665
Q ss_pred ChH----HHHHhhCCcccccccchhhhccccchhe-eccEEEecCCCCCCCCChh
Q 021939 123 FYD----ECLRKYGSVNVWRYCTDIFDYLSLSALI-ENKIFSVHGGLSPAISTLD 172 (305)
Q Consensus 123 f~~----e~~~~~~~~~~~~~~~~~f~~LP~~~~i-~~~il~vHgGi~p~~~~~~ 172 (305)
... .....+-.....+...++++.+|+...+ ++++++||||++|.|...+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~ 131 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLAT 131 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHH
Confidence 431 1122221223345577889999997765 5679999999999885433
No 23
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=5.3e-26 Score=207.41 Aligned_cols=123 Identities=21% Similarity=0.283 Sum_probs=99.4
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCC-CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGD-CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
|.++||||||||+++|.++|+.+.+ ++.++++|+||+|||||+|++|++++.++. +++++|+||||.++++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 5689999999999999999998874 568999999999999999999999999874 46889999999999987776
Q ss_pred ChH----HHHHhhCCcccccccchhhhccccchhe-eccEEEecCCCCCCCCC
Q 021939 123 FYD----ECLRKYGSVNVWRYCTDIFDYLSLSALI-ENKIFSVHGGLSPAIST 170 (305)
Q Consensus 123 f~~----e~~~~~~~~~~~~~~~~~f~~LP~~~~i-~~~il~vHgGi~p~~~~ 170 (305)
+.. +....+-.....+...+++..+|+.... +.++++||||++|.|..
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l 129 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDL 129 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcH
Confidence 521 1122211334556778899999998654 34699999999999853
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=2.9e-25 Score=199.82 Aligned_cols=123 Identities=24% Similarity=0.449 Sum_probs=96.2
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCC----------CCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcc
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDC----------PKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHE 113 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~----------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 113 (305)
|++.||||||||+.+|.++|+.++.. +.++++||||||||||+|.+|+++|++++.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 58999999999999999999987643 3579999999999999999999999998654 47999999999
Q ss_pred hhhhhhhcCC-------hHHHHHhhC--Ccccccccchhhhccccchhee-ccEEEecCCCCCCC
Q 021939 114 SRQITQVYGF-------YDECLRKYG--SVNVWRYCTDIFDYLSLSALIE-NKIFSVHGGLSPAI 168 (305)
Q Consensus 114 ~~~~~~~~gf-------~~e~~~~~~--~~~~~~~~~~~f~~LP~~~~i~-~~il~vHgGi~p~~ 168 (305)
.++++...+. ..+....+. ...+.+...++++.||+...++ ++++|||||+++.+
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9887643221 012223332 2345567788999999987764 57999999987653
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=3.4e-25 Score=201.39 Aligned_cols=121 Identities=24% Similarity=0.304 Sum_probs=98.0
Q ss_pred cceeeccCCCHHHHHHHHHhcCC-CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCCh
Q 021939 46 VTICGDIHGQFYDMKELFKVGGD-CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY 124 (305)
Q Consensus 46 i~viGDIHG~~~~L~~il~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 124 (305)
++||||||||+++|+++|+.++. ++.++++|+||+|||||+|+||++++++++ .++++|+||||.++++..+|..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 58999999999999999998875 468999999999999999999999999986 4799999999999887666543
Q ss_pred H----HHHHhhCCcccccccchhhhccccchheec-cEEEecCCCCCCCCC
Q 021939 125 D----ECLRKYGSVNVWRYCTDIFDYLSLSALIEN-KIFSVHGGLSPAIST 170 (305)
Q Consensus 125 ~----e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~-~il~vHgGi~p~~~~ 170 (305)
. +....+-.....+...+++..+|+...+++ ++++||||++|.|..
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~ 127 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSI 127 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCH
Confidence 1 111222122334567788999999887764 799999999999854
No 26
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=9.2e-25 Score=195.11 Aligned_cols=117 Identities=23% Similarity=0.278 Sum_probs=91.1
Q ss_pred cceeeccCCCHHHHHHHHHhcCCC--------CCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhh
Q 021939 46 VTICGDIHGQFYDMKELFKVGGDC--------PKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQI 117 (305)
Q Consensus 46 i~viGDIHG~~~~L~~il~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 117 (305)
.+||||||||++.|.++|+.++.. +.+++|||||||||||+|.+|+++|++++.. .++++|+||||.+++
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll 78 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAI 78 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHH
Confidence 369999999999999999887643 5689999999999999999999999998643 479999999999887
Q ss_pred hhhcCC------------h-----HHHHHhhC-CcccccccchhhhccccchheeccEEEecCCCC
Q 021939 118 TQVYGF------------Y-----DECLRKYG-SVNVWRYCTDIFDYLSLSALIENKIFSVHGGLS 165 (305)
Q Consensus 118 ~~~~gf------------~-----~e~~~~~~-~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~ 165 (305)
....+- . .+..+.++ ....++...++++.||+.... +++++||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 532210 0 12223332 234456778899999998765 56999999985
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.91 E-value=4.8e-24 Score=189.95 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=87.5
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCC-CCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDC-PKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
++++||||||||+++|.++|+.+... ..++++||||+|||||+|.+||++|.+ .++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999988764 688999999999999999999999976 25789999999998864322
Q ss_pred ChHHHHHhhC--------C--cccccccchhhhccccchhe---eccEEEecCCCC
Q 021939 123 FYDECLRKYG--------S--VNVWRYCTDIFDYLSLSALI---ENKIFSVHGGLS 165 (305)
Q Consensus 123 f~~e~~~~~~--------~--~~~~~~~~~~f~~LP~~~~i---~~~il~vHgGi~ 165 (305)
-........| . ...+....++++.||+...+ ++++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 1100001111 0 11234455788999998655 457999999984
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.91 E-value=1.3e-23 Score=192.14 Aligned_cols=199 Identities=21% Similarity=0.295 Sum_probs=130.8
Q ss_pred CcceeeccCCCHHHHHHHHHhcCC------CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCC-cEEEECCCcchhhh
Q 021939 45 PVTICGDIHGQFYDMKELFKVGGD------CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPD-RITLIRGNHESRQI 117 (305)
Q Consensus 45 ~i~viGDIHG~~~~L~~il~~~~~------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~ 117 (305)
++++||||||+++.|.++|+.+.. +..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 589999999999999999975431 23568999999999999999999999999998876 68899999998765
Q ss_pred hhhcC---------C------------------------------------------------------hHHHHHhhCCc
Q 021939 118 TQVYG---------F------------------------------------------------------YDECLRKYGSV 134 (305)
Q Consensus 118 ~~~~g---------f------------------------------------------------------~~e~~~~~~~~ 134 (305)
..... | ..+...+||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 42211 0 12334455421
Q ss_pred --------ccccccchhhhccccchheec------------cEEEecCCCCCCCCChhhhhhhc-cccccCCCCcccccc
Q 021939 135 --------NVWRYCTDIFDYLSLSALIEN------------KIFSVHGGLSPAISTLDQIRTID-RKQEVPHDGAMCDLL 193 (305)
Q Consensus 135 --------~~~~~~~~~f~~LP~~~~i~~------------~il~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~dll 193 (305)
.+.+...++++.||.....++ +.+|||||+.|....-+|...+. +....| ..+++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~l 238 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAPL 238 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccccc
Confidence 344567778888888755432 23899999999998777766543 222222 23788
Q ss_pred ccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEE
Q 021939 194 WSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILEL 273 (305)
Q Consensus 194 Wsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i 273 (305)
|.+..- | ..++.. . ..-.+||-||+. +....+.-|.|.+.-.|.+ ..-|.+.+
T Consensus 239 ~~R~~f----~-~~~~~~-------------~-~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~~---~l~aa~vl 291 (304)
T cd07421 239 SGRKNV----W-NIPQEL-------------A-DKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFDD---RPIAAIVL 291 (304)
T ss_pred ccchhh----h-cCcccc-------------c-CCCeEEEECCCC-----CceecCCEEEEECCCCcCC---ceeEEEEe
Confidence 886431 1 111110 0 011567778882 1233444567887766643 33454555
Q ss_pred c
Q 021939 274 D 274 (305)
Q Consensus 274 ~ 274 (305)
.
T Consensus 292 p 292 (304)
T cd07421 292 P 292 (304)
T ss_pred c
Confidence 4
No 29
>PHA02239 putative protein phosphatase
Probab=99.90 E-value=1.3e-23 Score=188.97 Aligned_cols=138 Identities=22% Similarity=0.358 Sum_probs=99.8
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCC--CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhc
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGD--CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVY 121 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 121 (305)
|++++||||||+++.|.++++.+.. .+.+.++|+|||||||++|.+|+..++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 5689999999999999999987743 2468999999999999999999999998753 346899999999998765321
Q ss_pred C--------------ChHHHHHhhCCcc------------------------------cccccchhhhccccchheeccE
Q 021939 122 G--------------FYDECLRKYGSVN------------------------------VWRYCTDIFDYLSLSALIENKI 157 (305)
Q Consensus 122 g--------------f~~e~~~~~~~~~------------------------------~~~~~~~~f~~LP~~~~i~~~i 157 (305)
+ ...+....||... .+..+..+++.||+....+ ++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CE
Confidence 1 0123335554210 1123344677888876654 69
Q ss_pred EEecCCCCCCCCChhhhhhhccccccCCCCccccccccCC
Q 021939 158 FSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDP 197 (305)
Q Consensus 158 l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 197 (305)
+|||||+.|... +++ ....+++|.+.
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~ 184 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD 184 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc
Confidence 999999998754 222 12468899974
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.90 E-value=5.1e-23 Score=181.81 Aligned_cols=143 Identities=24% Similarity=0.335 Sum_probs=102.0
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCC-CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGD-CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
+++++||||||++.+|.++++.... +..+.++++||+||||+++.+++++|.+ .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 4689999999999999999998765 3578999999999999999999999876 36899999999998876543
Q ss_pred --ChHHHHHhhCCc--------ccccccchhhhccccchhee---ccEEEecCCCCCCCCChhhhhhhccccccCCCCcc
Q 021939 123 --FYDECLRKYGSV--------NVWRYCTDIFDYLSLSALIE---NKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAM 189 (305)
Q Consensus 123 --f~~e~~~~~~~~--------~~~~~~~~~f~~LP~~~~i~---~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 189 (305)
...+...+.+.. ..++...++++.||+...+. +++++||||+++... ...+. + +...+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 222222223221 13344667999999988764 479999999865431 11100 0 11223345
Q ss_pred ccccccCCC
Q 021939 190 CDLLWSDPE 198 (305)
Q Consensus 190 ~dllWsdp~ 198 (305)
.+++|+++.
T Consensus 149 ~~~~w~~~~ 157 (207)
T cd07424 149 EELLWSRTR 157 (207)
T ss_pred eeeeeccch
Confidence 678998764
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.86 E-value=2.2e-21 Score=172.93 Aligned_cols=116 Identities=19% Similarity=0.168 Sum_probs=84.8
Q ss_pred CCcceeeccCCCHHHHHHHHHhcC-CCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 44 APVTICGDIHGQFYDMKELFKVGG-DCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
.+++||||||||+++|+++++... .+..++++|+||+|||||+|.+|+++|.+ .++++||||||.+++.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 489999999999999999998876 34678999999999999999999999865 36889999999988764321
Q ss_pred Ch-HH-------HHHhhCCc--ccccccchhhhccccchhe---eccEEEecCCCC
Q 021939 123 FY-DE-------CLRKYGSV--NVWRYCTDIFDYLSLSALI---ENKIFSVHGGLS 165 (305)
Q Consensus 123 f~-~e-------~~~~~~~~--~~~~~~~~~f~~LP~~~~i---~~~il~vHgGi~ 165 (305)
-. .. ........ ........+++.||+...+ ++++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 00 00111000 0112234478899988765 357899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.35 E-value=2.3e-12 Score=105.71 Aligned_cols=77 Identities=23% Similarity=0.299 Sum_probs=59.2
Q ss_pred CCcceeeccCCCHHHH----HHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHH--HhchhhCCCcEEEECCCcchhhh
Q 021939 44 APVTICGDIHGQFYDM----KELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLL--LALKVRYPDRITLIRGNHESRQI 117 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L----~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~ 117 (305)
++|+++||+|+..... ..+.+.....+.+.+|++||++++|..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 3689999999999987 44445555677899999999999999988777654 44445555789999999999876
Q ss_pred hhh
Q 021939 118 TQV 120 (305)
Q Consensus 118 ~~~ 120 (305)
...
T Consensus 81 ~~~ 83 (200)
T PF00149_consen 81 NSF 83 (200)
T ss_dssp HHH
T ss_pred ccc
Confidence 543
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.20 E-value=3e-10 Score=95.17 Aligned_cols=59 Identities=20% Similarity=0.371 Sum_probs=48.7
Q ss_pred CcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 45 PVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 45 ~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
++.++||+||+...+.++++.... .+.++++||++++++.+. ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 478999999999999999987654 789999999999998765 111 24589999999975
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.16 E-value=3.3e-10 Score=94.31 Aligned_cols=61 Identities=23% Similarity=0.457 Sum_probs=46.8
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhh
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
|+++++||+|++...+.++++.+ ...+.++++||+++ ..++++.+..+ .++.++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCccccc
Confidence 57899999999999999999887 34789999999999 37777777655 5999999999654
No 35
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.11 E-value=3.2e-10 Score=92.59 Aligned_cols=144 Identities=44% Similarity=0.713 Sum_probs=118.8
Q ss_pred hhhhcCChHHHHHhhCCcccccc---cchhhhccccchheec-cEEEecCCCCCCC-CChhhhhhhcccc--ccCCCCcc
Q 021939 117 ITQVYGFYDECLRKYGSVNVWRY---CTDIFDYLSLSALIEN-KIFSVHGGLSPAI-STLDQIRTIDRKQ--EVPHDGAM 189 (305)
Q Consensus 117 ~~~~~gf~~e~~~~~~~~~~~~~---~~~~f~~LP~~~~i~~-~il~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 189 (305)
+...+++..++...++....|.. ..++|+.||+...+.+ .++|.|++++|.. ..++++..+.|.. .+...+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44556777777777755446776 8999999999999988 9999999999975 6778888887766 67778888
Q ss_pred ccccccCCCC-CCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCC
Q 021939 190 CDLLWSDPED-IVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYC 261 (305)
Q Consensus 190 ~dllWsdp~~-~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 261 (305)
.+.+|+++.. ....|.++++|.+..+ ++.+..|...+....+.++|+....++...+.+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 8889999875 2678999999987666 788888887777777999999999999987775889999999987
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.10 E-value=1.3e-09 Score=91.97 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=50.5
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCC-CCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDC-PKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
|++.++||+||+..++..+++..... ..+.++++||++ +.+++..+.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57899999999998887777665554 679999999998 467777776653 2489999999973
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=99.07 E-value=2.5e-10 Score=98.69 Aligned_cols=69 Identities=23% Similarity=0.308 Sum_probs=57.2
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCC--------hHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFY--------SVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
|++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 5789999999999999999987766678999999999999873 566777776542 3699999999975
Q ss_pred h
Q 021939 116 Q 116 (305)
Q Consensus 116 ~ 116 (305)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.98 E-value=2.1e-09 Score=88.36 Aligned_cols=118 Identities=18% Similarity=0.117 Sum_probs=80.6
Q ss_pred CcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChH--HHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 45 PVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSV--ETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 45 ~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
++.++||+||++. .....+.+.++++||+++++..+. +.+.++.+++. ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPH---PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCCC---CeEEEEECCCCCcCC-----
Confidence 3789999999987 123456789999999999986542 35555655431 236789999996321
Q ss_pred ChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCC
Q 021939 123 FYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVD 202 (305)
Q Consensus 123 f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 202 (305)
.-+.+++++||.+.+... ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLD----------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCcc----------------------cccc-------
Confidence 124579999986422110 0000
Q ss_pred CCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceE
Q 021939 203 GWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYK 244 (305)
Q Consensus 203 ~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 244 (305)
....|...+.+++++.+.++++-||.-.+.|++
T Consensus 88 ---------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 ---------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred ---------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 013466788888888899999999999988876
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.97 E-value=2.8e-09 Score=95.90 Aligned_cols=113 Identities=24% Similarity=0.269 Sum_probs=75.7
Q ss_pred CcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhh----
Q 021939 45 PVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQV---- 120 (305)
Q Consensus 45 ~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~---- 120 (305)
+|+++|||||+..... .+.......|.++++||+++ .+.+++..|.++. ..+++++||||.......
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~~pD~Vl~~GDi~~---~~~~~~~~l~~l~----~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLLQPDLVLFVGDFGN---ESVQLVRAISSLP----LPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhccCCCEEEECCCCCc---ChHHHHHHHHhCC----CCeEEEcCCCcccccccccchH
Confidence 5789999999987632 12222334689999999986 4567777776652 348999999998553200
Q ss_pred ----------------cC------------------------Ch-HHHHHhhCCcccccccchhhhccccchheeccEEE
Q 021939 121 ----------------YG------------------------FY-DECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFS 159 (305)
Q Consensus 121 ----------------~g------------------------f~-~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~ 159 (305)
++ +. .++...|+-.+.++.+...++.++.++.....+|+
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 00 11 24556666566667777778888644444557999
Q ss_pred ecCCCCC
Q 021939 160 VHGGLSP 166 (305)
Q Consensus 160 vHgGi~p 166 (305)
.|++++-
T Consensus 153 aH~~~~G 159 (238)
T cd07397 153 AHNGPSG 159 (238)
T ss_pred eCcCCcC
Confidence 9999864
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.75 E-value=6.1e-08 Score=76.84 Aligned_cols=117 Identities=22% Similarity=0.330 Sum_probs=82.5
Q ss_pred ceeeccCCCHHHHHHHH--HhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCCh
Q 021939 47 TICGDIHGQFYDMKELF--KVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY 124 (305)
Q Consensus 47 ~viGDIHG~~~~L~~il--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 124 (305)
+++||+|+......... ........+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999887765 44455667899999999999998777555422222333457999999999
Q ss_pred HHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCCCCChhhhhhhccccccCCCCccccccccCCCCCCCCC
Q 021939 125 DECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGW 204 (305)
Q Consensus 125 ~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 204 (305)
+++.|+.+.+....... ..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~~---------------------~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELSP---------------------DE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhcc---------------------cc--------
Confidence 88899987553321100 00
Q ss_pred CCCCCCceEEeCchhhhhchhcCCceEEEecccceecceE
Q 021939 205 GLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYK 244 (305)
Q Consensus 205 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 244 (305)
..........+...+...++.||.-....+.
T Consensus 89 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 ---------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ---------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0045667777888899999999998766554
No 41
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.74 E-value=2.1e-08 Score=89.73 Aligned_cols=71 Identities=10% Similarity=0.146 Sum_probs=59.1
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
+++.++||+||++..+.++++.....+.|.+|.+||++++|+..-++..++..+.... ..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 5689999999999999999987766678999999999999987777777776664332 3589999999985
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.67 E-value=7.7e-07 Score=76.90 Aligned_cols=62 Identities=21% Similarity=0.339 Sum_probs=43.2
Q ss_pred CcceeeccC-CCHH-HHH-HHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 45 PVTICGDIH-GQFY-DMK-ELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 45 ~i~viGDIH-G~~~-~L~-~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
.|.||||.| |... .+. .+++.....+.+.++.+||+++ .+++.++..+. ..+++++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 368999999 6543 122 2333333355789999999986 77888776653 2589999999963
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.48 E-value=3.3e-07 Score=78.50 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=48.3
Q ss_pred cceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCCh-HHHHHHHHhchhhCCCcEEEECCCcchhhh
Q 021939 46 VTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYS-VETFLLLLALKVRYPDRITLIRGNHESRQI 117 (305)
Q Consensus 46 i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 117 (305)
|.++||+||++..+.. ......+.|.+|++||++++|... .+.+..+.++ +..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5789999999998876 333345678999999999999763 3333444333 3458999999998543
No 44
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.44 E-value=3.4e-07 Score=82.19 Aligned_cols=207 Identities=12% Similarity=0.077 Sum_probs=99.5
Q ss_pred cceeeccCCCH------HHHHHHHHhcCCCCCcEEEEeCcccCCC-----CC--hHHHHHHHHhchhhCCCcEEEECCCc
Q 021939 46 VTICGDIHGQF------YDMKELFKVGGDCPKTNYLFLGDFVDRG-----FY--SVETFLLLLALKVRYPDRITLIRGNH 112 (305)
Q Consensus 46 i~viGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 112 (305)
+++++|+|... ..+.+.++.... ..+.++++||++|.. +. ..++...+..|+.. +..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 223444433222 578999999999952 11 13466667666543 34699999999
Q ss_pred chhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCC-CCChhhhhhhcc-cc------ccC
Q 021939 113 ESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPA-ISTLDQIRTIDR-KQ------EVP 184 (305)
Q Consensus 113 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~-~~~~~~i~~i~r-~~------~~~ 184 (305)
|...-. ...+..|- .+ +..--...+-+.+++++||-.-.. -....-.+++-| |. ..|
T Consensus 79 D~~~~~-------~~~~~~gi-~~-------l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM-TL-------LPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC-EE-------ECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974311 11111111 11 111011112267899999975421 011111111111 10 000
Q ss_pred C--CCccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCc
Q 021939 185 H--DGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCY 262 (305)
Q Consensus 185 ~--~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~ 262 (305)
. ...+...+++.... .... .+. .-....+..+.+.++..+.+++|.||.-.+.=+....++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRA-DKQM--KSQ-DIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHH-hcCC--Ccc-hhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0 00112223331111 0000 000 111234567788888899999999999665434332222222333333332
Q ss_pred cCCCeEEEEEEcCCC
Q 021939 263 RCGNVAAILELDENL 277 (305)
Q Consensus 263 ~~~N~~avl~i~~~~ 277 (305)
..+.++.+++++
T Consensus 219 ---~~~~~~~~~~~g 230 (231)
T TIGR01854 219 ---RQGSILRVDADG 230 (231)
T ss_pred ---cCCeEEEEcCCC
Confidence 235677777654
No 45
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.38 E-value=1.3e-05 Score=71.15 Aligned_cols=193 Identities=15% Similarity=0.119 Sum_probs=97.8
Q ss_pred CcceeeccCCCHH----HH----HHHHHhcCCCCCcEEEEeCcccCCCCChH---HHHHHHHhchhhCCCcEEEECCCcc
Q 021939 45 PVTICGDIHGQFY----DM----KELFKVGGDCPKTNYLFLGDFVDRGFYSV---ETFLLLLALKVRYPDRITLIRGNHE 113 (305)
Q Consensus 45 ~i~viGDIHG~~~----~L----~~il~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~lk~~~p~~v~~lrGNHE 113 (305)
+++++||+|-..+ .+ ..+.+.......+.++++||++|.|.... .....+..|.. .+--++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 4789999995322 23 33444444455788999999999998433 23333444431 1123889999999
Q ss_pred hhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCCCCChhhhhhhccccccCCCCcccccc
Q 021939 114 SRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLL 193 (305)
Q Consensus 114 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 193 (305)
... ...+... ..-++.+.+.++.-+- ...++++|-=+.+.... .....
T Consensus 81 ~~~-~ld~~~~---------~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~------------------~~~~~ 128 (214)
T cd07399 81 LVL-ALEFGPR---------DEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSR------------------PDSID 128 (214)
T ss_pred chh-hCCCCCC---------HHHHHHHHHHHHHCCC----CCEEEEecccccCCCCc------------------Ccccc
Confidence 422 1111110 1111122222222211 23477788644321110 00011
Q ss_pred ccCCCCCCCCCCCCCCCceEEeCchhhhhchhcC-CceEEEecccceecceEEe-----cCCeEEEEEcCCCCCccCCCe
Q 021939 194 WSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSN-NIDYICRAHQLVMEGYKWM-----FNNQIVTVWSAPNYCYRCGNV 267 (305)
Q Consensus 194 Wsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~-~~~~iirgH~~~~~G~~~~-----~~~~~itifSa~~y~~~~~N~ 267 (305)
|.. ....+.....+.++++ ++++++-||.-. .+.... .++.+..+.+........+|-
T Consensus 129 ~~~---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~-~~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~ 192 (214)
T cd07399 129 YDS---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHG-AGRTTLVSVGDAGRTVHQMLADYQGEPNGGNG 192 (214)
T ss_pred ccc---------------ccccHHHHHHHHHhCCCCEEEEEccccCC-CceEEEcccCCCCCEeeEEeecccCCCCCCcc
Confidence 110 0122445677788887 899999999654 233222 144455554432211111221
Q ss_pred -EEEEEEcCC-CCeEEEEEec
Q 021939 268 -AAILELDEN-LNKQFRVFDA 286 (305)
Q Consensus 268 -~avl~i~~~-~~~~~~~~~~ 286 (305)
=.++.++.+ .++.+.+|.|
T Consensus 193 ~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 193 FLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred eEEEEEEecCCCEEEEEeCCC
Confidence 247778777 4777777765
No 46
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.37 E-value=6e-06 Score=68.05 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=76.3
Q ss_pred cceeeccCCCHHH----------HHHHHHhcCCCCCcEEEEeCcccCCCCCh--HHHHHHHHhchhhCCCcEEEECCCcc
Q 021939 46 VTICGDIHGQFYD----------MKELFKVGGDCPKTNYLFLGDFVDRGFYS--VETFLLLLALKVRYPDRITLIRGNHE 113 (305)
Q Consensus 46 i~viGDIHG~~~~----------L~~il~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE 113 (305)
++.++|+|=.... |.++++.....+.+.++++||+++.|... .....++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 4678999932211 22344455556688999999999998752 23445555554432 26999999999
Q ss_pred hhhhhhhcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCCCCChhhhhhhccccccCCCCcccccc
Q 021939 114 SRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLL 193 (305)
Q Consensus 114 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 193 (305)
. ++++|..+.+.....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~~---------------------- 95 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGSG---------------------- 95 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCccc----------------------
Confidence 7 888997764421100
Q ss_pred ccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceE
Q 021939 194 WSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYK 244 (305)
Q Consensus 194 Wsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 244 (305)
. ... .+.+.+.+++++.++++++.||.-.+..+.
T Consensus 96 -~----------~~~------~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 96 -R----------ERL------LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred -c----------ccC------CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 0 000 045677888888999999999998765554
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.35 E-value=3.3e-06 Score=69.04 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=41.6
Q ss_pred ceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcc
Q 021939 47 TICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHE 113 (305)
Q Consensus 47 ~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 113 (305)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+.+++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 4899999997777776654 46679999999973 34556666542 124889999999
No 48
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.35 E-value=6.9e-07 Score=78.99 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=54.6
Q ss_pred CCcceeeccCCCHH----HHHHHHHhcCCCCCcEEEEeCcccCCCCChH-HHHHHHHhchhhCCCcEEEECCCcchhh
Q 021939 44 APVTICGDIHGQFY----DMKELFKVGGDCPKTNYLFLGDFVDRGFYSV-ETFLLLLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 44 ~~i~viGDIHG~~~----~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
+++.+++|+|+... .+.++++.......+.++++||++|.+.... .+..++..++.. ..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~--~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAP--LGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCC--CCEEEECCCccccc
Confidence 56899999998754 5777777665566789999999999988765 566666666433 35999999999853
No 49
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.34 E-value=8.5e-07 Score=81.57 Aligned_cols=70 Identities=19% Similarity=0.142 Sum_probs=53.6
Q ss_pred CCcceeeccCCC----HHHHHHHHHhcCCCCCcEEEEeCcccCCC--CChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 44 APVTICGDIHGQ----FYDMKELFKVGGDCPKTNYLFLGDFVDRG--FYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 44 ~~i~viGDIHG~----~~~L~~il~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
.++++++|+|.. ...+.++++.......|.++++||++|++ ....++...|..|+...| ++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 469999999976 45577777766666778999999999954 233456677777776544 99999999974
No 50
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=98.30 E-value=4.1e-07 Score=87.89 Aligned_cols=242 Identities=13% Similarity=-0.029 Sum_probs=165.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeeeecC----CcceeeccCCCHHHHHHHHHhcCCCCC-cEEEEeCcccCCCCChHHH
Q 021939 16 PLKESEVKALCLKAMEILVEESNVQRVDA----PVTICGDIHGQFYDMKELFKVGGDCPK-TNYLFLGDFVDRGFYSVET 90 (305)
Q Consensus 16 ~~~~~~~~~l~~~~~~il~~ep~l~~i~~----~i~viGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~vDrG~~s~ev 90 (305)
.+...++..+++.+.+++..+||...+.. -.+.++|.||.+.|+.+.++.. |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 57788999999999999999999887743 3889999999999999988764 433 3599999999999999999
Q ss_pred HHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhhCCc--ccccccchhhhccc-cchheeccEEEecCCCCCC
Q 021939 91 FLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSV--NVWRYCTDIFDYLS-LSALIENKIFSVHGGLSPA 167 (305)
Q Consensus 91 l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~--~~~~~~~~~f~~LP-~~~~i~~~il~vHgGi~p~ 167 (305)
+..+...+...|+...+.|++||+..+...++|..+....++.. .+...+.. ..++ ++....+.++ -+.-+.-.
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~--~~~~~i~~~y~g~~l-e~~kvt~e 168 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDE--EDMDLIESDYSGPVL-EDHKVTLE 168 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccc--ccccccccccCCccc-ccchhhHH
Confidence 99999999999999999999999999989999888877666432 12221211 1222 3333333332 11111100
Q ss_pred --------------------CCChhhhhhhccccccCCCC-ccccccccCCCCCCCCCCCCCCCceEEeCchhhhhchhc
Q 021939 168 --------------------ISTLDQIRTIDRKQEVPHDG-AMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHS 226 (305)
Q Consensus 168 --------------------~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~ 226 (305)
...+++...+.+....+-+. .-.+..|+++......|.+..++.+...++..+..|+..
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfn 248 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFN 248 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCccccccc
Confidence 01111112222221111111 335788998887556666677777778888999999999
Q ss_pred CCceEEEecccce------------ecceEEec---CCeEEEEEcCCCCCc
Q 021939 227 NNIDYICRAHQLV------------MEGYKWMF---NNQIVTVWSAPNYCY 262 (305)
Q Consensus 227 ~~~~~iirgH~~~------------~~G~~~~~---~~~~itifSa~~y~~ 262 (305)
.+..-+.+.+.-+ ..+|.... .+.+.++|+++.++.
T Consensus 249 gdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 249 GDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 8888888887643 22333222 234889999988763
No 51
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.27 E-value=8.1e-07 Score=75.29 Aligned_cols=67 Identities=22% Similarity=0.139 Sum_probs=48.4
Q ss_pred cceeeccCCCHHHHHHHH-HhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 46 VTICGDIHGQFYDMKELF-KVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 46 i~viGDIHG~~~~L~~il-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
+.++||+|+....+...+ +.......+.++++||+++++..+..+. ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 468999999987776655 3334556789999999999987765543 22222 2234699999999985
No 52
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.18 E-value=4.4e-05 Score=65.64 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=48.1
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhh
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
|.+.|+||.||...+..+..+.......+.+|.+||++...+.. .+.. ....+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcc
Confidence 67899999999997666666666677889999999999655422 2222 01257999999999853
No 53
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.15 E-value=3.7e-06 Score=75.94 Aligned_cols=71 Identities=17% Similarity=0.174 Sum_probs=49.2
Q ss_pred CCcceeeccCCCH------HHHHHHHHhcCCCCCcEEEEeCcccCC-------CCChHHHHHHHHhchhhCCCcEEEECC
Q 021939 44 APVTICGDIHGQF------YDMKELFKVGGDCPKTNYLFLGDFVDR-------GFYSVETFLLLLALKVRYPDRITLIRG 110 (305)
Q Consensus 44 ~~i~viGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~vDr-------G~~s~evl~~l~~lk~~~p~~v~~lrG 110 (305)
|++++++|+|... ..+.+.++.. ....+.++++||++|. .+...+++..|.+++.. +-.+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 5789999999542 2344444332 2357899999999985 22345677777777543 236999999
Q ss_pred Ccchhh
Q 021939 111 NHESRQ 116 (305)
Q Consensus 111 NHE~~~ 116 (305)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999743
No 54
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.04 E-value=9.6e-06 Score=73.03 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=49.6
Q ss_pred CcceeeccCCCH------HHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 45 PVTICGDIHGQF------YDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 45 ~i~viGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
++.+++|+|+++ ..|.++++.......+.++++||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999653 22556666665566889999999999876666666555543 224599999999974
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.01 E-value=0.00014 Score=66.26 Aligned_cols=70 Identities=13% Similarity=-0.009 Sum_probs=42.4
Q ss_pred cceeeccCCCH----------------HHHHHHHHhcCC--CCCcEEEEeCcccCCCCChH---HHHHHHH-hchhh-CC
Q 021939 46 VTICGDIHGQF----------------YDMKELFKVGGD--CPKTNYLFLGDFVDRGFYSV---ETFLLLL-ALKVR-YP 102 (305)
Q Consensus 46 i~viGDIHG~~----------------~~L~~il~~~~~--~~~~~~vfLGD~vDrG~~s~---evl~~l~-~lk~~-~p 102 (305)
++++||+|-.. ..|+++++.+.. +..+.++++||+++.|.... +....+. .++.. .+
T Consensus 7 f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (262)
T cd07395 7 FIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDPD 86 (262)
T ss_pred EEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccCC
Confidence 56778887653 124555555433 36678999999999987642 1112221 12221 12
Q ss_pred CcEEEECCCcchh
Q 021939 103 DRITLIRGNHESR 115 (305)
Q Consensus 103 ~~v~~lrGNHE~~ 115 (305)
-.++.++||||..
T Consensus 87 vp~~~i~GNHD~~ 99 (262)
T cd07395 87 IPLVCVCGNHDVG 99 (262)
T ss_pred CcEEEeCCCCCCC
Confidence 3599999999974
No 56
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.96 E-value=1.5e-05 Score=72.64 Aligned_cols=72 Identities=22% Similarity=0.227 Sum_probs=50.4
Q ss_pred CCcceeeccCC-C-----------HHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHH----HHHHhchhhCCCcEEE
Q 021939 44 APVTICGDIHG-Q-----------FYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETF----LLLLALKVRYPDRITL 107 (305)
Q Consensus 44 ~~i~viGDIHG-~-----------~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~ 107 (305)
|+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 56889999993 2 234556665555556899999999999987665443 4444554433346999
Q ss_pred ECCCcchh
Q 021939 108 IRGNHESR 115 (305)
Q Consensus 108 lrGNHE~~ 115 (305)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 57
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.96 E-value=0.00018 Score=71.93 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=44.7
Q ss_pred CCcceeeccC-CCH----HHHHHHHHhcC---------CCCCcEEEEeCcccCC-CCCh---------------HHHHHH
Q 021939 44 APVTICGDIH-GQF----YDMKELFKVGG---------DCPKTNYLFLGDFVDR-GFYS---------------VETFLL 93 (305)
Q Consensus 44 ~~i~viGDIH-G~~----~~L~~il~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~~ 93 (305)
..+++++|+| |.. ..+..+++... ....+.+|++||++|. |..+ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4588999999 653 22344433322 2235789999999995 3211 135555
Q ss_pred HHhchhhCCCcEEEECCCcchhh
Q 021939 94 LLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 94 l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
|.++... -.+++++||||...
T Consensus 324 L~~L~~~--i~V~~ipGNHD~~~ 344 (504)
T PRK04036 324 LKQIPED--IKIIISPGNHDAVR 344 (504)
T ss_pred HHhhhcC--CeEEEecCCCcchh
Confidence 6655432 35999999999754
No 58
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.95 E-value=2.8e-05 Score=66.37 Aligned_cols=67 Identities=30% Similarity=0.361 Sum_probs=45.0
Q ss_pred cceeeccCCCHHHH---------------HHHHHhcC--CCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEE
Q 021939 46 VTICGDIHGQFYDM---------------KELFKVGG--DCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLI 108 (305)
Q Consensus 46 i~viGDIHG~~~~L---------------~~il~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 108 (305)
+++++|+|=....- ..+++... ..+.+.++++||++++|..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47889999655432 22333322 2356899999999999987644 5555544 2469999
Q ss_pred CCCcchhhh
Q 021939 109 RGNHESRQI 117 (305)
Q Consensus 109 rGNHE~~~~ 117 (305)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997543
No 59
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.86 E-value=3.6e-05 Score=70.55 Aligned_cols=73 Identities=21% Similarity=0.213 Sum_probs=48.2
Q ss_pred CcceeeccC--C-----------CHHHHHHHHHhcCCCCCcEEEEeCcccCCCCC-hHHHHHHHHhchhhCCCcEEEECC
Q 021939 45 PVTICGDIH--G-----------QFYDMKELFKVGGDCPKTNYLFLGDFVDRGFY-SVETFLLLLALKVRYPDRITLIRG 110 (305)
Q Consensus 45 ~i~viGDIH--G-----------~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrG 110 (305)
++.++||+| . ....+.++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 578999999 2 13556777766655557899999999998873 223333333322222235999999
Q ss_pred Ccchhhh
Q 021939 111 NHESRQI 117 (305)
Q Consensus 111 NHE~~~~ 117 (305)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 60
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.83 E-value=3.1e-05 Score=73.55 Aligned_cols=72 Identities=21% Similarity=0.283 Sum_probs=49.4
Q ss_pred CCcceeeccC-C-----------CHHHHHHHHHhcCCCCCcEEEEeCcccCCC-CChHHHHHHHHh--ch--hhCCCcEE
Q 021939 44 APVTICGDIH-G-----------QFYDMKELFKVGGDCPKTNYLFLGDFVDRG-FYSVETFLLLLA--LK--VRYPDRIT 106 (305)
Q Consensus 44 ~~i~viGDIH-G-----------~~~~L~~il~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--lk--~~~p~~v~ 106 (305)
|+++.+||+| | ....|.++++.+.....+.++++||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5788999999 4 223456666666566779999999999985 445555544433 11 12234699
Q ss_pred EECCCcchh
Q 021939 107 LIRGNHESR 115 (305)
Q Consensus 107 ~lrGNHE~~ 115 (305)
++.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 61
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.70 E-value=0.00013 Score=64.18 Aligned_cols=69 Identities=22% Similarity=0.143 Sum_probs=38.8
Q ss_pred ceeeccCC---CHHH---HHHHHHhcCCCCCcEEEEeCcccCCC--C-----Ch-HHHHHHHHhchhhCCCcEEEECCCc
Q 021939 47 TICGDIHG---QFYD---MKELFKVGGDCPKTNYLFLGDFVDRG--F-----YS-VETFLLLLALKVRYPDRITLIRGNH 112 (305)
Q Consensus 47 ~viGDIHG---~~~~---L~~il~~~~~~~~~~~vfLGD~vDrG--~-----~s-~evl~~l~~lk~~~p~~v~~lrGNH 112 (305)
++|+|+|- ...+ +...++.......+.+|++||++|.- . .. .+.+..+..+.. ....++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLAD-RGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHH-CCCeEEEECCCc
Confidence 58999992 2222 22222221124678999999999841 1 11 122233333222 235799999999
Q ss_pred chhh
Q 021939 113 ESRQ 116 (305)
Q Consensus 113 E~~~ 116 (305)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9854
No 62
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.68 E-value=0.00011 Score=65.62 Aligned_cols=67 Identities=25% Similarity=0.283 Sum_probs=46.6
Q ss_pred CcceeeccCCC------------HHHHHHHHHhcCC--CCCcEEEEeCcccCCCCCh--HHHHHHHHhchhhCCCcEEEE
Q 021939 45 PVTICGDIHGQ------------FYDMKELFKVGGD--CPKTNYLFLGDFVDRGFYS--VETFLLLLALKVRYPDRITLI 108 (305)
Q Consensus 45 ~i~viGDIHG~------------~~~L~~il~~~~~--~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~l 108 (305)
++++++|+|=. ...+.++++.+.. +..+-+|++||+++.|... ..++..+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 47899999944 3356777765544 3678999999999987632 2233444444 3358999
Q ss_pred CCCcchh
Q 021939 109 RGNHESR 115 (305)
Q Consensus 109 rGNHE~~ 115 (305)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 63
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.66 E-value=0.0023 Score=56.83 Aligned_cols=212 Identities=21% Similarity=0.200 Sum_probs=118.3
Q ss_pred cCCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCccc--CCCCChHHHHH-HHHhchhhCCCcEEEECCCcchhhhhh
Q 021939 43 DAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFV--DRGFYSVETFL-LLLALKVRYPDRITLIRGNHESRQITQ 119 (305)
Q Consensus 43 ~~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~v--DrG~~s~evl~-~l~~lk~~~p~~v~~lrGNHE~~~~~~ 119 (305)
.+++..+.|+||..+.+.++++.......+.+++.||+. +.|+.-..... .+..++... -.++.++||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~-~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELG-IPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcC-CeEEEEcCCCChHHHHH
Confidence 467999999999999999999988888889999999999 88875333222 133333221 46999999999875432
Q ss_pred hcCChHHHHHhhCCcccccccchhhhccccchheeccEEEecCCCCCC-CC-----Chhhhhhhccc-cccCCCCccccc
Q 021939 120 VYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPA-IS-----TLDQIRTIDRK-QEVPHDGAMCDL 192 (305)
Q Consensus 120 ~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~-~~-----~~~~i~~i~r~-~~~~~~~~~~dl 192 (305)
. ....+ ..+.. -..-+++--+|-=||+.|. +. +.++|.+.-+. .+... ....=+
T Consensus 82 ~-------l~~~~-~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~~Il 142 (226)
T COG2129 82 V-------LKNAG-VNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-NPVNIL 142 (226)
T ss_pred H-------HHhcc-ccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc-CcceEE
Confidence 1 11111 11110 0111133223333555442 11 12333322111 11000 000011
Q ss_pred cccCCCCCCCCCCCCCCCceEEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEE
Q 021939 193 LWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILE 272 (305)
Q Consensus 193 lWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~ 272 (305)
+.--|..... ...+-| -.--|..+++++.++.+-...+.||=-...|+..- |. ||+-.|.-.+ .-..|++.
T Consensus 143 ~~HaPP~gt~--~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i--G~--TivVNPG~~~--~g~yA~i~ 213 (226)
T COG2129 143 LTHAPPYGTL--LDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI--GN--TIVVNPGPLG--EGRYALIE 213 (226)
T ss_pred EecCCCCCcc--ccCCCC-ccccchHHHHHHHHHhCCceEEEeeeccccccccc--CC--eEEECCCCcc--CceEEEEE
Confidence 1111211000 002222 13568999999999999999999987777888753 22 4555554422 34678998
Q ss_pred EcCCCCeEEEEE
Q 021939 273 LDENLNKQFRVF 284 (305)
Q Consensus 273 i~~~~~~~~~~~ 284 (305)
+++. .++..+|
T Consensus 214 l~~~-~Vk~~~~ 224 (226)
T COG2129 214 LEKE-VVKLEQF 224 (226)
T ss_pred ecCc-EEEEEEe
Confidence 8866 5555554
No 64
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.63 E-value=9.1e-05 Score=65.08 Aligned_cols=72 Identities=26% Similarity=0.254 Sum_probs=48.5
Q ss_pred CcceeeccC-CCH--------------HHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHH----HHhchhhCCCcE
Q 021939 45 PVTICGDIH-GQF--------------YDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLL----LLALKVRYPDRI 105 (305)
Q Consensus 45 ~i~viGDIH-G~~--------------~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~----l~~lk~~~p~~v 105 (305)
+++.++|+| |.. ..|.++++.......+.++++||++|....+.+.+.. +.+++. ..-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 478899999 322 2356666665556678999999999988755544333 333321 12369
Q ss_pred EEECCCcchhhh
Q 021939 106 TLIRGNHESRQI 117 (305)
Q Consensus 106 ~~lrGNHE~~~~ 117 (305)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998653
No 65
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.60 E-value=0.00013 Score=66.85 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=45.5
Q ss_pred cceeeccCCCHHHHHHHHHh---cCCCCCcEEEEeCcccCCCCC-hHHHH----------HHHHhc--hhhCCCcEEEEC
Q 021939 46 VTICGDIHGQFYDMKELFKV---GGDCPKTNYLFLGDFVDRGFY-SVETF----------LLLLAL--KVRYPDRITLIR 109 (305)
Q Consensus 46 i~viGDIHG~~~~L~~il~~---~~~~~~~~~vfLGD~vDrG~~-s~evl----------~~l~~l--k~~~p~~v~~lr 109 (305)
|+|+||+||+++.+...++. ....+.|.+|++||+-..+.. ..+.+ ++..-+ ....|--++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999998765433 233568899999999654433 22222 121111 222455579999
Q ss_pred CCcchh
Q 021939 110 GNHESR 115 (305)
Q Consensus 110 GNHE~~ 115 (305)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.59 E-value=0.00011 Score=62.14 Aligned_cols=49 Identities=22% Similarity=0.253 Sum_probs=31.2
Q ss_pred CCCCCcEEEEeCcccCCCCChH-HHH-HHHHhchhh---C-CCcEEEECCCcchh
Q 021939 67 GDCPKTNYLFLGDFVDRGFYSV-ETF-LLLLALKVR---Y-PDRITLIRGNHESR 115 (305)
Q Consensus 67 ~~~~~~~~vfLGD~vDrG~~s~-evl-~~l~~lk~~---~-p~~v~~lrGNHE~~ 115 (305)
.....+.++++||++|.+..+. +.. ..+.+++.. . +-.++++.||||..
T Consensus 35 ~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 35 WLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3456789999999999876422 221 222333222 1 23699999999974
No 67
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.58 E-value=0.00016 Score=64.88 Aligned_cols=65 Identities=22% Similarity=0.251 Sum_probs=41.8
Q ss_pred cceeeccCCC---------H-----HHHHHHHHhcC--CCCCcEEEEeCcccCCCCCh--HHHHHHHHhchhhCCCcEEE
Q 021939 46 VTICGDIHGQ---------F-----YDMKELFKVGG--DCPKTNYLFLGDFVDRGFYS--VETFLLLLALKVRYPDRITL 107 (305)
Q Consensus 46 i~viGDIHG~---------~-----~~L~~il~~~~--~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~ 107 (305)
+++++|+|-. + +-+.++.+... .++.|-+++.||++++++.. .+.+.+|.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 1 22333333322 23688999999999887633 2344444443 234899
Q ss_pred ECCCcch
Q 021939 108 IRGNHES 114 (305)
Q Consensus 108 lrGNHE~ 114 (305)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 68
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.56 E-value=0.00014 Score=66.88 Aligned_cols=70 Identities=11% Similarity=0.083 Sum_probs=46.0
Q ss_pred CCcceeeccC-C-----------CHHHHHHHHHhcCC--CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEEC
Q 021939 44 APVTICGDIH-G-----------QFYDMKELFKVGGD--CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIR 109 (305)
Q Consensus 44 ~~i~viGDIH-G-----------~~~~L~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 109 (305)
++++.++|+| . ....|.++++.+.. +..+-+|+.||+++.|.. +-...+.+.-...+..++.+.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~--~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSS--EAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCH--HHHHHHHHHHhhcCCcEEEeC
Confidence 5699999999 1 13557777765432 356889999999998752 222222222122234599999
Q ss_pred CCcchh
Q 021939 110 GNHESR 115 (305)
Q Consensus 110 GNHE~~ 115 (305)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999974
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.55 E-value=0.00022 Score=64.02 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=45.8
Q ss_pred CCcceeeccC-CCHHH----------------HHHHHHhcCCCCCcEEEEeCcccCCCCC---hHHHHHHHHhchhhCCC
Q 021939 44 APVTICGDIH-GQFYD----------------MKELFKVGGDCPKTNYLFLGDFVDRGFY---SVETFLLLLALKVRYPD 103 (305)
Q Consensus 44 ~~i~viGDIH-G~~~~----------------L~~il~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~lk~~~p~ 103 (305)
.++.+|+|+| |--.. |.++.+.......+.++++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6688999999 54332 2233344445567899999999976554 333444555443 3
Q ss_pred cEEEECCCcchhh
Q 021939 104 RITLIRGNHESRQ 116 (305)
Q Consensus 104 ~v~~lrGNHE~~~ 116 (305)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 70
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.48 E-value=0.00025 Score=60.64 Aligned_cols=57 Identities=23% Similarity=0.265 Sum_probs=35.0
Q ss_pred HHHHHHhcCCCCCcEEEEeCcccCCCCChH-HHHHH--HHhchhhCCCcEEEECCCcchhh
Q 021939 59 MKELFKVGGDCPKTNYLFLGDFVDRGFYSV-ETFLL--LLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 59 L~~il~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~--l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
+.++.+.....+.+.+|++||+++....+. +.... +..+ ...+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 344455555556789999999998755332 21211 1121 123347999999999853
No 71
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.45 E-value=0.00033 Score=61.13 Aligned_cols=70 Identities=11% Similarity=0.011 Sum_probs=44.3
Q ss_pred CCcceeeccCCCHH------------HHHHHHHhcCCCCCcEEEEeCcccCCCCCh---HHHHHHHHhchhhCCCcEEEE
Q 021939 44 APVTICGDIHGQFY------------DMKELFKVGGDCPKTNYLFLGDFVDRGFYS---VETFLLLLALKVRYPDRITLI 108 (305)
Q Consensus 44 ~~i~viGDIHG~~~------------~L~~il~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~l 108 (305)
.++.+++|+|-... .+..+.+.......+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 45889999996322 122222334445678999999999977653 445544443222222358899
Q ss_pred CCCcc
Q 021939 109 RGNHE 113 (305)
Q Consensus 109 rGNHE 113 (305)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 72
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.30 E-value=0.00037 Score=67.89 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=48.3
Q ss_pred CCcceeeccC-CC-H------HH----HHHHHHhcCCCCCcEEEEeCcccCCCCChHHHH----HHHHhchhhCCCcEEE
Q 021939 44 APVTICGDIH-GQ-F------YD----MKELFKVGGDCPKTNYLFLGDFVDRGFYSVETF----LLLLALKVRYPDRITL 107 (305)
Q Consensus 44 ~~i~viGDIH-G~-~------~~----L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~ 107 (305)
|+++.++|+| |. + .+ |..+++.......+.+++.||++|++..+.... .++..|+.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5688999999 32 1 11 344555555667899999999999986554432 334445432 235999
Q ss_pred ECCCcchhh
Q 021939 108 IRGNHESRQ 116 (305)
Q Consensus 108 lrGNHE~~~ 116 (305)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999854
No 73
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.29 E-value=0.00053 Score=66.62 Aligned_cols=53 Identities=15% Similarity=0.225 Sum_probs=42.7
Q ss_pred CCcceeeccCCC------------HHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHh
Q 021939 44 APVTICGDIHGQ------------FYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLA 96 (305)
Q Consensus 44 ~~i~viGDIHG~------------~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 96 (305)
+++..++|+|-- +..|.++++.+.....|-+++.||+.|++.-|.+++..+++
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 678999999942 45678888877777789999999999999999887755443
No 74
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.26 E-value=0.00085 Score=60.55 Aligned_cols=67 Identities=19% Similarity=0.213 Sum_probs=40.6
Q ss_pred ceeeccC--CCH---HHHHHHHHhcCCC-----CCcEEEEeCcccCCCCC------------h----HHHHHHHHhchhh
Q 021939 47 TICGDIH--GQF---YDMKELFKVGGDC-----PKTNYLFLGDFVDRGFY------------S----VETFLLLLALKVR 100 (305)
Q Consensus 47 ~viGDIH--G~~---~~L~~il~~~~~~-----~~~~~vfLGD~vDrG~~------------s----~evl~~l~~lk~~ 100 (305)
++++|+| +.. ..+..+++..... ..+.+|++||++|+... . ..+..++.+|...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 5799999 432 2233344332222 34899999999997320 0 1244455555432
Q ss_pred CCCcEEEECCCcchh
Q 021939 101 YPDRITLIRGNHESR 115 (305)
Q Consensus 101 ~p~~v~~lrGNHE~~ 115 (305)
-.|+++.||||..
T Consensus 82 --~~v~~ipGNHD~~ 94 (243)
T cd07386 82 --IKIIIIPGNHDAV 94 (243)
T ss_pred --CeEEEeCCCCCcc
Confidence 3699999999984
No 75
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.24 E-value=0.00092 Score=60.84 Aligned_cols=73 Identities=18% Similarity=0.255 Sum_probs=50.6
Q ss_pred CCcceeeccCCC------HHHHHHHHHhcCCCCCcEEEEeCcccCCCCC-hHH-HHHHHHhchhhCCCcEEEECCCcchh
Q 021939 44 APVTICGDIHGQ------FYDMKELFKVGGDCPKTNYLFLGDFVDRGFY-SVE-TFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 44 ~~i~viGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~-s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
++++.|+|+|-. ...+..+++.....+.|-+|+.||+.++|.. +.+ ...+|. +...|..++.++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~--~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA--RLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh--hccCCCceEeeCCCCcCC
Confidence 357889999977 2335666677776677999999999999642 222 222222 224556799999999997
Q ss_pred hhh
Q 021939 116 QIT 118 (305)
Q Consensus 116 ~~~ 118 (305)
...
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 653
No 76
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.19 E-value=0.00077 Score=61.46 Aligned_cols=70 Identities=20% Similarity=0.107 Sum_probs=43.2
Q ss_pred cceeeccCCCHH------HH-HHHHHhcCCCCCcEEEEeCcccCCCCCh--------H---HHHHHHHhchhhCCCcEEE
Q 021939 46 VTICGDIHGQFY------DM-KELFKVGGDCPKTNYLFLGDFVDRGFYS--------V---ETFLLLLALKVRYPDRITL 107 (305)
Q Consensus 46 i~viGDIHG~~~------~L-~~il~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~lk~~~p~~v~~ 107 (305)
++.++|+|-... .. ..+++.......+.+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467899996322 12 3344555555678999999999987521 1 2222222222222456899
Q ss_pred ECCCcchh
Q 021939 108 IRGNHESR 115 (305)
Q Consensus 108 lrGNHE~~ 115 (305)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 77
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.13 E-value=0.00079 Score=62.46 Aligned_cols=70 Identities=20% Similarity=0.210 Sum_probs=50.6
Q ss_pred CcceeeccCCCHHH--HHHHHHhcCCCCCcEEEEeCcccCC-C-CChHHHHHHHHhchhhCCCcEEEECCCcchhh
Q 021939 45 PVTICGDIHGQFYD--MKELFKVGGDCPKTNYLFLGDFVDR-G-FYSVETFLLLLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 45 ~i~viGDIHG~~~~--L~~il~~~~~~~~~~~vfLGD~vDr-G-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
+|+-++|+|-.... ..+.+........|-+++.||++|+ . +....+...|..|+..+ .++++.||||...
T Consensus 46 ~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 46 KIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred EEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 48999999988766 2233333333334999999999995 4 44555777777777654 6999999998754
No 78
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.09 E-value=0.00047 Score=63.56 Aligned_cols=69 Identities=20% Similarity=0.201 Sum_probs=42.9
Q ss_pred CCcceeeccCCC----HHHHHHHHHhcCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHhchhhCCCcEEEECCCcch
Q 021939 44 APVTICGDIHGQ----FYDMKELFKVGGDCPKTNYLFLGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 44 ~~i~viGDIHG~----~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
-+++|+||.|.. ...+.++.+. ....+-++++||+++-+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 358899999952 2333333333 35567899999999544322 223333433433444 8899999998
Q ss_pred hh
Q 021939 115 RQ 116 (305)
Q Consensus 115 ~~ 116 (305)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 54
No 79
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.93 E-value=0.0017 Score=56.97 Aligned_cols=48 Identities=19% Similarity=0.344 Sum_probs=36.2
Q ss_pred CCCCCcEEEEeCcccCCCCCh--HHHHHHHHhchhhCC----CcEEEECCCcch
Q 021939 67 GDCPKTNYLFLGDFVDRGFYS--VETFLLLLALKVRYP----DRITLIRGNHES 114 (305)
Q Consensus 67 ~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p----~~v~~lrGNHE~ 114 (305)
.....+.++|+||++|.|+.+ .+..+.+..++..++ -.++.+.||||-
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDI 92 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDI 92 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCc
Confidence 444678999999999999964 346776777665432 368899999996
No 80
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.92 E-value=0.0019 Score=55.32 Aligned_cols=53 Identities=23% Similarity=0.208 Sum_probs=33.5
Q ss_pred HhcCCCCCcEEEEeCcccCCCCChH--HHHHHHHhchhhC--------CCcEEEECCCcchhh
Q 021939 64 KVGGDCPKTNYLFLGDFVDRGFYSV--ETFLLLLALKVRY--------PDRITLIRGNHESRQ 116 (305)
Q Consensus 64 ~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~--------p~~v~~lrGNHE~~~ 116 (305)
+.......+.++++||++|.+.... +....+..++..+ +-.++.+.||||...
T Consensus 39 ~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 39 TALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3344556789999999999987532 2222232222211 246999999999853
No 81
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.75 E-value=0.005 Score=51.69 Aligned_cols=67 Identities=22% Similarity=0.226 Sum_probs=44.5
Q ss_pred cceeeccCC------------CHHHHHHH-HHhcC--CCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECC
Q 021939 46 VTICGDIHG------------QFYDMKEL-FKVGG--DCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRG 110 (305)
Q Consensus 46 i~viGDIHG------------~~~~L~~i-l~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrG 110 (305)
++.+||.|= +.+..... ++... ..++|.+.+|||+.-.-....+..+++.+| |.++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 677888873 33333332 22221 347899999999986555555566666655 478999999
Q ss_pred Ccchhh
Q 021939 111 NHESRQ 116 (305)
Q Consensus 111 NHE~~~ 116 (305)
|||---
T Consensus 82 NhDk~~ 87 (186)
T COG4186 82 NHDKCH 87 (186)
T ss_pred CCCCCc
Confidence 999743
No 82
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.71 E-value=0.0023 Score=57.69 Aligned_cols=66 Identities=29% Similarity=0.284 Sum_probs=44.4
Q ss_pred CcceeeccCCCH---------HHHHHHHHhcCCC-CCcEEEEeCcccCCCCChH-----HHHHHHHhchhhCCCcEEEEC
Q 021939 45 PVTICGDIHGQF---------YDMKELFKVGGDC-PKTNYLFLGDFVDRGFYSV-----ETFLLLLALKVRYPDRITLIR 109 (305)
Q Consensus 45 ~i~viGDIHG~~---------~~L~~il~~~~~~-~~~~~vfLGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lr 109 (305)
+++.++|+||.+ ..+..+++..... ++.-++..||+++.++.+. .++..+..+.. .+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~----d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALGY----DA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcCC----CE-Eee
Confidence 478899999887 4566667655433 3446677999999888653 45665555432 23 456
Q ss_pred CCcchh
Q 021939 110 GNHESR 115 (305)
Q Consensus 110 GNHE~~ 115 (305)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999973
No 83
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.69 E-value=0.0055 Score=54.92 Aligned_cols=200 Identities=16% Similarity=0.145 Sum_probs=100.5
Q ss_pred ceeeccCCC-----H-HHHHHHHHhcCCCCCcEEEEeCcccCC--CCC--h---HHHHHHHHhchhhCCCcEEEECCCcc
Q 021939 47 TICGDIHGQ-----F-YDMKELFKVGGDCPKTNYLFLGDFVDR--GFY--S---VETFLLLLALKVRYPDRITLIRGNHE 113 (305)
Q Consensus 47 ~viGDIHG~-----~-~~L~~il~~~~~~~~~~~vfLGD~vDr--G~~--s---~evl~~l~~lk~~~p~~v~~lrGNHE 113 (305)
+.|+|+|=. . +.|.+.|+... +..+.++++||++|- |.+ + .+|...|..+.. -..+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 368999954 2 22445555433 356899999999853 222 1 235555554432 2358999999999
Q ss_pred hhhhhhhcCChHHHHHhhCCcccccccchhhhccccchhe---eccEEEecCCCC-CCCCChhhhhhhccc-------cc
Q 021939 114 SRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALI---ENKIFSVHGGLS-PAISTLDQIRTIDRK-------QE 182 (305)
Q Consensus 114 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~il~vHgGi~-p~~~~~~~i~~i~r~-------~~ 182 (305)
.. +...++ ...|. +.-+|-...+ +.+++.+||-.- +....-...+...+. ..
T Consensus 79 fl-l~~~f~------~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FL-LGKRFA------QEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HH-HHHHHH------hhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 53 322221 11221 1223333333 679999999752 111000000000000 00
Q ss_pred cCCC--CccccccccCCCCCCCCCCCCCCCce---EEeCchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcC
Q 021939 183 VPHD--GAMCDLLWSDPEDIVDGWGLSPRGAG---FLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSA 257 (305)
Q Consensus 183 ~~~~--~~~~dllWsdp~~~~~~~~~~~rg~~---~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa 257 (305)
.|.. .-+..-+|+.- .|........ .-..+..+.+-+++++++.+|.||.-.+..-...- ..-| +-
T Consensus 142 l~l~~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~-~~yi-~l-- 212 (237)
T COG2908 142 LPLRVRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG-ITYI-NL-- 212 (237)
T ss_pred hHHHHHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC-ceEE-ec--
Confidence 0000 01112344432 2222211111 13456677777899999999999998776655432 1111 11
Q ss_pred CCCCccCCCeEEEEEEcCCCC
Q 021939 258 PNYCYRCGNVAAILELDENLN 278 (305)
Q Consensus 258 ~~y~~~~~N~~avl~i~~~~~ 278 (305)
|.-...+|+++++.+..
T Consensus 213 ----GdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 213 ----GDWVSEGSILEVDDGGL 229 (237)
T ss_pred ----CcchhcceEEEEecCcE
Confidence 11124679999987643
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.65 E-value=0.0055 Score=51.51 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=47.4
Q ss_pred ceeeccCCCHHHHHHHHHhcC--CCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcc
Q 021939 47 TICGDIHGQFYDMKELFKVGG--DCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHE 113 (305)
Q Consensus 47 ~viGDIHG~~~~L~~il~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 113 (305)
.|+||+||+++.+..-++... ..+-+-++++||+..-...+-+ +.-...=....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 489999999999876665432 3366889999999876665533 33333334556667999999998
No 85
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.39 E-value=0.0031 Score=56.20 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=45.3
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHH--------------------------HHHHhc
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETF--------------------------LLLLAL 97 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl--------------------------~~l~~l 97 (305)
.++.+++|.||+++.|.++.+.+.....|-++|+||++-....+-|-. .++..|
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 348899999999999999998888778899999999986655444333 333333
Q ss_pred hhhCCCcEEEECCCcchhh
Q 021939 98 KVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 98 k~~~p~~v~~lrGNHE~~~ 116 (305)
.. .+--+++++||||...
T Consensus 86 ~~-~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GE-LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HC-C-SEEEEE--TTS-SH
T ss_pred Hh-cCCcEEEecCCCCchH
Confidence 22 2336889999999854
No 86
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.36 E-value=0.0083 Score=57.92 Aligned_cols=73 Identities=22% Similarity=0.232 Sum_probs=51.9
Q ss_pred CCcceeeccCCC-------------HHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhc-hhhCC--CcEEE
Q 021939 44 APVTICGDIHGQ-------------FYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLAL-KVRYP--DRITL 107 (305)
Q Consensus 44 ~~i~viGDIHG~-------------~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l-k~~~p--~~v~~ 107 (305)
|++.-++|.|=- +.+|..+++.+.....|-+|..||+.|++.-|.+++..+.+. +.... =-|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 467778888854 334555666666667799999999999998888876655442 22220 15999
Q ss_pred ECCCcchhh
Q 021939 108 IRGNHESRQ 116 (305)
Q Consensus 108 lrGNHE~~~ 116 (305)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999964
No 87
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.34 E-value=0.0082 Score=46.52 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=33.1
Q ss_pred cHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhCCCeeee
Q 021939 3 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRV 42 (305)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i 42 (305)
.++.|++.+++++.++...+..|+.++.++|+++|++++|
T Consensus 56 fv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 56 FVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4789999999999999999999999999999999999986
No 88
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.13 E-value=0.014 Score=51.18 Aligned_cols=66 Identities=18% Similarity=0.171 Sum_probs=43.1
Q ss_pred eeccCCCHHHHHHHHHhc-CCCCCcEEEEeCcccCCCCChHH-HHHHHHhchhhC---------------------CCcE
Q 021939 49 CGDIHGQFYDMKELFKVG-GDCPKTNYLFLGDFVDRGFYSVE-TFLLLLALKVRY---------------------PDRI 105 (305)
Q Consensus 49 iGDIHG~~~~L~~il~~~-~~~~~~~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~---------------------p~~v 105 (305)
-=|++|+=.-|.++++.. .....+.++||||++|.|--+-+ --....+++..+ .-.+
T Consensus 22 rld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~ 101 (193)
T cd08164 22 RLDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPL 101 (193)
T ss_pred eehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceE
Confidence 336677766677777543 34567899999999999753322 223344443332 1357
Q ss_pred EEECCCcch
Q 021939 106 TLIRGNHES 114 (305)
Q Consensus 106 ~~lrGNHE~ 114 (305)
+.|.||||.
T Consensus 102 i~V~GNHDI 110 (193)
T cd08164 102 INIAGNHDV 110 (193)
T ss_pred EEECCcccC
Confidence 899999998
No 89
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.08 E-value=0.0071 Score=55.56 Aligned_cols=66 Identities=21% Similarity=0.214 Sum_probs=40.7
Q ss_pred CcceeeccCCCH----------------HHHHHHHHhcCCCCCcEEEE-eCcccCCCCCh-----------HHHHHHHHh
Q 021939 45 PVTICGDIHGQF----------------YDMKELFKVGGDCPKTNYLF-LGDFVDRGFYS-----------VETFLLLLA 96 (305)
Q Consensus 45 ~i~viGDIHG~~----------------~~L~~il~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 96 (305)
.|+.++|+||++ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 367889999986 23555665544333344444 89999876522 235566665
Q ss_pred chhhCCCcEEEECCCcchh
Q 021939 97 LKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 97 lk~~~p~~v~~lrGNHE~~ 115 (305)
+.. -++..||||..
T Consensus 82 ~g~-----d~~~lGNHe~d 95 (277)
T cd07410 82 LGY-----DAGTLGNHEFN 95 (277)
T ss_pred cCC-----CEEeecccCcc
Confidence 542 24556999963
No 90
>PLN02533 probable purple acid phosphatase
Probab=95.80 E-value=0.011 Score=58.04 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=42.4
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChH---HHHHHHHhchhhCCCcEEEECCCcchhh
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSV---ETFLLLLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
-+++++||+|-. ......++.+.....+-++++||+++-+.... +-..++..+....| ++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 358999999632 22223344334456788999999997543321 12333333433444 788999999853
No 91
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.69 E-value=0.014 Score=53.37 Aligned_cols=24 Identities=8% Similarity=-0.032 Sum_probs=20.5
Q ss_pred EeCchhhhhchhcCCceEEEeccc
Q 021939 214 LFGGSVVTSFNHSNNIDYICRAHQ 237 (305)
Q Consensus 214 ~fG~~~~~~fl~~~~~~~iirgH~ 237 (305)
+-..+.+++.|+..+-.+|.-||+
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCC
Confidence 457788889999999889998887
No 92
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.30 E-value=0.052 Score=48.82 Aligned_cols=72 Identities=19% Similarity=0.216 Sum_probs=47.5
Q ss_pred ecCCcceeeccCCCHHHH----------------HHHHH-hcCCCCCcEEEEeCcccCCCC-----ChHHHHHHHHhchh
Q 021939 42 VDAPVTICGDIHGQFYDM----------------KELFK-VGGDCPKTNYLFLGDFVDRGF-----YSVETFLLLLALKV 99 (305)
Q Consensus 42 i~~~i~viGDIHG~~~~L----------------~~il~-~~~~~~~~~~vfLGD~vDrG~-----~s~evl~~l~~lk~ 99 (305)
...+..|++|+|=-+..- .+.+. ....-..+++|.+||+-.-.+ +..++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 457899999999655432 22332 333456789999999964433 23555555555554
Q ss_pred hCCCcEEEECCCcchhh
Q 021939 100 RYPDRITLIRGNHESRQ 116 (305)
Q Consensus 100 ~~p~~v~~lrGNHE~~~ 116 (305)
. .+++++||||...
T Consensus 98 ~---evi~i~GNHD~~i 111 (235)
T COG1407 98 R---EVIIIRGNHDNGI 111 (235)
T ss_pred C---cEEEEeccCCCcc
Confidence 3 4999999999853
No 93
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.11 E-value=0.045 Score=49.94 Aligned_cols=69 Identities=28% Similarity=0.279 Sum_probs=40.0
Q ss_pred CcceeeccCCC--H--HHHHHHH-HhcCCCCCcEEEEeCccc-CCCCChH------HHHHHHHh-chhhCCCcEEEECCC
Q 021939 45 PVTICGDIHGQ--F--YDMKELF-KVGGDCPKTNYLFLGDFV-DRGFYSV------ETFLLLLA-LKVRYPDRITLIRGN 111 (305)
Q Consensus 45 ~i~viGDIHG~--~--~~L~~il-~~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-lk~~~p~~v~~lrGN 111 (305)
+++++||.=.. . .++.+.+ +.......+-+|++||++ +-|..+. +.+..++. +... --++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ--VPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc--CCeEEecCC
Confidence 46789998664 1 2333333 333345668899999987 5554221 22222222 2222 249999999
Q ss_pred cchh
Q 021939 112 HESR 115 (305)
Q Consensus 112 HE~~ 115 (305)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9985
No 94
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=95.07 E-value=0.021 Score=57.66 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=44.8
Q ss_pred CCHHHHHHHH-HhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhh
Q 021939 54 GQFYDMKELF-KVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQIT 118 (305)
Q Consensus 54 G~~~~L~~il-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 118 (305)
|+.++|...| ..+..-..|++-.+||+.||||.+-.+++.|+.. .+|=+-.||||--++.
T Consensus 167 ~~a~~fI~al~~lIqrL~VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMG 227 (640)
T PF06874_consen 167 GRADEFIIALSELIQRLAVDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMG 227 (640)
T ss_pred CcHHHHHHHHHHHHHHHhhhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHH
Confidence 3444444333 2333445789999999999999999999999976 4667889999996653
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.06 E-value=0.035 Score=50.47 Aligned_cols=66 Identities=20% Similarity=0.171 Sum_probs=41.7
Q ss_pred CcceeeccCCCH----------HHHHHHHHhcCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHhchhhCCCcEEEEC
Q 021939 45 PVTICGDIHGQF----------YDMKELFKVGGDCPKTNYLFLGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIR 109 (305)
Q Consensus 45 ~i~viGDIHG~~----------~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lr 109 (305)
.++-++|+||++ ..+..+++.....+.+-++..||.++..+.+ ..++..+..+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 367789999985 3455556544333556677799999876643 234455555432 23 456
Q ss_pred CCcchh
Q 021939 110 GNHESR 115 (305)
Q Consensus 110 GNHE~~ 115 (305)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.62 E-value=0.032 Score=51.76 Aligned_cols=66 Identities=23% Similarity=0.330 Sum_probs=43.1
Q ss_pred CcceeeccCCCHHH--------------HHHHHHhcCC-CCCcEEEEeCcccCCCCC-h-----HHHHHHHHhchhhCCC
Q 021939 45 PVTICGDIHGQFYD--------------MKELFKVGGD-CPKTNYLFLGDFVDRGFY-S-----VETFLLLLALKVRYPD 103 (305)
Q Consensus 45 ~i~viGDIHG~~~~--------------L~~il~~~~~-~~~~~~vfLGD~vDrG~~-s-----~evl~~l~~lk~~~p~ 103 (305)
.++.+.|+||++.. +..+++.... .+..-++..||++...+. + ..++..+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 36788999998642 5556654432 344567779999987664 2 2466777666542
Q ss_pred cEEEECCCcchh
Q 021939 104 RITLIRGNHESR 115 (305)
Q Consensus 104 ~v~~lrGNHE~~ 115 (305)
+ +..||||.-
T Consensus 79 -a-~t~GNHefd 88 (288)
T cd07412 79 -A-SAVGNHEFD 88 (288)
T ss_pred -e-eeecccccc
Confidence 3 556999963
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.25 E-value=0.08 Score=48.35 Aligned_cols=64 Identities=22% Similarity=0.125 Sum_probs=37.8
Q ss_pred cceeeccCCCHH----------------------HHHHHHHhcCCC-CCcEE-EEeCcccCCCCCh-----HHHHHHHHh
Q 021939 46 VTICGDIHGQFY----------------------DMKELFKVGGDC-PKTNY-LFLGDFVDRGFYS-----VETFLLLLA 96 (305)
Q Consensus 46 i~viGDIHG~~~----------------------~L~~il~~~~~~-~~~~~-vfLGD~vDrG~~s-----~evl~~l~~ 96 (305)
++.++|+||++. .+..+++..... ..+.+ +..||+++..+.+ ..++..+.+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 556788888743 344455444332 34444 5699999887643 245555555
Q ss_pred chhhCCCcEEEECCCcchh
Q 021939 97 LKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 97 lk~~~p~~v~~lrGNHE~~ 115 (305)
+. --.+. ||||..
T Consensus 83 ~g-----~da~~-GNHefd 95 (264)
T cd07411 83 LG-----VDAMV-GHWEFT 95 (264)
T ss_pred hC-----CeEEe-cccccc
Confidence 42 22344 999964
No 98
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=93.57 E-value=0.0096 Score=56.87 Aligned_cols=196 Identities=10% Similarity=-0.085 Sum_probs=121.0
Q ss_pred CCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChHHHHHhh---CCcccccccchhhhc
Q 021939 70 PKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKY---GSVNVWRYCTDIFDY 146 (305)
Q Consensus 70 ~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~~f~~ 146 (305)
..-..|+++++.+++...++.+.+-...+..+-.+.-.+++||+... +++.+....- +...+++..++-++.
T Consensus 47 d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~ 121 (476)
T KOG0918|consen 47 DYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKP 121 (476)
T ss_pred cceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCcc
Confidence 34468999999999999999999999888888788889999995543 2333322111 224567888888888
Q ss_pred cccchheeccEEEecCCCCCCCCChhhhhhhcccc--cc--CCCCccccccccCCCCCCCCCCCCCCCceEE--eCchhh
Q 021939 147 LSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQ--EV--PHDGAMCDLLWSDPEDIVDGWGLSPRGAGFL--FGGSVV 220 (305)
Q Consensus 147 LP~~~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~--~~--~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~--fG~~~~ 220 (305)
.+.+.+.+ ++++.||+..|.......+..+.-.. +. ...+ -..++-++-.. ...|.... ...+ |.....
T Consensus 122 ~l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg-~f~llD~~~~~-k~tw~~~~--~~p~~gyDfwyq 196 (476)
T KOG0918|consen 122 SLEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKG-GFLLLDSDFNE-KGTWEKPG--HSPLFGYDFWYQ 196 (476)
T ss_pred ceeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcC-CeEEecCccce-ecccccCC--Cccccccceeec
Confidence 88888877 89999999999765443332111000 00 0011 11222222111 22344322 2222 222333
Q ss_pred hhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCCC
Q 021939 221 TSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENL 277 (305)
Q Consensus 221 ~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~~ 277 (305)
-++......+...+.|.....+.....++ ++.++++-|.-..+|..+.+.+..++
T Consensus 197 pr~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 197 PRHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred cccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 34455556667777777543343333344 78889888887778888999888764
No 99
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.29 E-value=0.16 Score=46.85 Aligned_cols=72 Identities=24% Similarity=0.220 Sum_probs=43.9
Q ss_pred CcceeeccCCCH---HHHHHHHHhcCC--CCCcEEEEeCcccCCCCChH--H------HHHHHHhchhhCCC-cEEEECC
Q 021939 45 PVTICGDIHGQF---YDMKELFKVGGD--CPKTNYLFLGDFVDRGFYSV--E------TFLLLLALKVRYPD-RITLIRG 110 (305)
Q Consensus 45 ~i~viGDIHG~~---~~L~~il~~~~~--~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~lk~~~p~-~v~~lrG 110 (305)
+.--.|+-. |- ..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. -++.+.|
T Consensus 39 ~~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~G 117 (296)
T cd00842 39 PAGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALG 117 (296)
T ss_pred CCCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCC
Confidence 344556654 42 335555554433 46789999999999887531 1 12233334444444 5999999
Q ss_pred Ccchhhh
Q 021939 111 NHESRQI 117 (305)
Q Consensus 111 NHE~~~~ 117 (305)
|||....
T Consensus 118 NHD~~p~ 124 (296)
T cd00842 118 NHDSYPV 124 (296)
T ss_pred CCCCCcc
Confidence 9998643
No 100
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=92.94 E-value=0.12 Score=57.01 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=42.4
Q ss_pred CcceeeccCCCHH---HHHHHHHhcCCCCCcEEEE-eCcccCCCCCh-----HHHHHHHHhchhhCCCcEEEECCCcch
Q 021939 45 PVTICGDIHGQFY---DMKELFKVGGDCPKTNYLF-LGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 45 ~i~viGDIHG~~~---~L~~il~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
.++.++|+||++. .+..+++.......+.+++ .||++++.+.+ ..+++.+..+.. -++..||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4789999999863 3445554433223344444 89999987654 346666666533 2468999997
No 101
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.84 E-value=0.21 Score=48.39 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=35.8
Q ss_pred CCCCcEEEEeCcccCCCCCh--HHHHHHHHhchhhCCC----cEEEECCCcch
Q 021939 68 DCPKTNYLFLGDFVDRGFYS--VETFLLLLALKVRYPD----RITLIRGNHES 114 (305)
Q Consensus 68 ~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~----~v~~lrGNHE~ 114 (305)
....+-++||||++|-|... -|--....+++..+|. .+..+.||||-
T Consensus 91 ~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 91 RLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred ccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 34568899999999988863 4455566667766664 68899999997
No 102
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=92.83 E-value=0.047 Score=47.09 Aligned_cols=44 Identities=30% Similarity=0.345 Sum_probs=32.3
Q ss_pred CCCcEEEEeCccc--CCCCChHHHHHHHHhchhhCCCcEEEECCCcchhh
Q 021939 69 CPKTNYLFLGDFV--DRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 69 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
.++|.++.-||+- =|=++..+=+.++-+| |..=+++|||||...
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3577888889984 3445556666666665 678889999999864
No 103
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=92.78 E-value=3.3 Score=41.01 Aligned_cols=53 Identities=13% Similarity=0.030 Sum_probs=34.9
Q ss_pred ceEEEecccceecceEEecCCeEEEEEcCCCCCccCCCeEEEEEEcCC-CCeEEEEEec
Q 021939 229 IDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDEN-LNKQFRVFDA 286 (305)
Q Consensus 229 ~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~~avl~i~~~-~~~~~~~~~~ 286 (305)
-+.++.||+.. .|+....+.+++..+|.+.+.. .+-++-|+.. ++..++.+..
T Consensus 419 PDv~~~Ghvh~-~g~~~y~gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 419 PDVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred CcEEEEccccc-cceeEEeccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 36788899987 7888887889999988887753 2334444433 3444444443
No 104
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=92.24 E-value=0.23 Score=45.79 Aligned_cols=65 Identities=22% Similarity=0.246 Sum_probs=39.0
Q ss_pred cceeeccCCCH---------------------HHHHHHHHhcCCC-CCcEEEEeCcccCCCCC-----hHHHHHHHHhch
Q 021939 46 VTICGDIHGQF---------------------YDMKELFKVGGDC-PKTNYLFLGDFVDRGFY-----SVETFLLLLALK 98 (305)
Q Consensus 46 i~viGDIHG~~---------------------~~L~~il~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk 98 (305)
++-++|+||++ ..+..+++..... +..-++..||.++..+. ...+++.+..+.
T Consensus 3 il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~g 82 (281)
T cd07409 3 ILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLLG 82 (281)
T ss_pred EEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhcC
Confidence 56788999875 3345555544332 33345558999987663 334555555554
Q ss_pred hhCCCcEEEECCCcchh
Q 021939 99 VRYPDRITLIRGNHESR 115 (305)
Q Consensus 99 ~~~p~~v~~lrGNHE~~ 115 (305)
. .+ +..||||.-
T Consensus 83 ~----D~-~~lGNHefd 94 (281)
T cd07409 83 Y----DA-MTLGNHEFD 94 (281)
T ss_pred C----CE-EEecccccc
Confidence 3 23 445999973
No 105
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=92.20 E-value=6 Score=36.24 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=29.3
Q ss_pred eEEEecccceecceEEec--CCeEEEEEcCCCCCccCCCeEEEEEEc-CCCCeEEEEE
Q 021939 230 DYICRAHQLVMEGYKWMF--NNQIVTVWSAPNYCYRCGNVAAILELD-ENLNKQFRVF 284 (305)
Q Consensus 230 ~~iirgH~~~~~G~~~~~--~~~~itifSa~~y~~~~~N~~avl~i~-~~~~~~~~~~ 284 (305)
..++.|||.. -|.+... +++-+.+.|.|.|.. .|.++.+| ++++++.+.|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 4566788876 3444332 256677788898863 34444443 4566666654
No 106
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=92.20 E-value=0.4 Score=45.63 Aligned_cols=73 Identities=22% Similarity=0.315 Sum_probs=47.0
Q ss_pred CCcceeeccCCCHHHHHHHH---HhcCCCCCcEEEEeCccc-CCCCC---hHHHH---HHHHhc------hhhCCCcEEE
Q 021939 44 APVTICGDIHGQFYDMKELF---KVGGDCPKTNYLFLGDFV-DRGFY---SVETF---LLLLAL------KVRYPDRITL 107 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il---~~~~~~~~~~~vfLGD~v-DrG~~---s~evl---~~l~~l------k~~~p~~v~~ 107 (305)
|+|.|-|=-||.++.+-+-+ ++.+..+.|.++++||+= =|... ++.|= .-+..+ ...+|=--++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 57899999999999987444 556667889999999983 12211 21111 111111 2334545678
Q ss_pred ECCCcchhh
Q 021939 108 IRGNHESRQ 116 (305)
Q Consensus 108 lrGNHE~~~ 116 (305)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999964
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=90.87 E-value=0.42 Score=43.49 Aligned_cols=56 Identities=30% Similarity=0.258 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHhcCCC-CCcEEEEeCcccCCCCC-----hHHHHHHHHhchhhCCCcEEEECCCcch
Q 021939 54 GQFYDMKELFKVGGDC-PKTNYLFLGDFVDRGFY-----SVETFLLLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 54 G~~~~L~~il~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
|.+..+..+++..... ++.-++..||+++.++. ...++..+..+.. -+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 4466777777654433 34467778999988753 2456676666642 3467899997
No 108
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=89.87 E-value=0.71 Score=42.47 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=49.2
Q ss_pred CCcceeeccCCC--HHHHHHHHHhcC-CCCCcEEEEeCcccCCC-CChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 44 APVTICGDIHGQ--FYDMKELFKVGG-DCPKTNYLFLGDFVDRG-FYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 44 ~~i~viGDIHG~--~~~L~~il~~~~-~~~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
|++.++|||=|. ...+...|..+. ..+.|-+|..||....| .-+.++.+.|..+.. .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 578999999999 455777775443 23457778889998766 457888888888754 35454 999984
No 109
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=89.54 E-value=0.37 Score=44.63 Aligned_cols=66 Identities=18% Similarity=0.112 Sum_probs=39.6
Q ss_pred CcceeeccCCCHHH-------------HHHH---HHh-cCC-CCCcEEEEeCcccCCCCCh-------HHHHHHHHhchh
Q 021939 45 PVTICGDIHGQFYD-------------MKEL---FKV-GGD-CPKTNYLFLGDFVDRGFYS-------VETFLLLLALKV 99 (305)
Q Consensus 45 ~i~viGDIHG~~~~-------------L~~i---l~~-~~~-~~~~~~vfLGD~vDrG~~s-------~evl~~l~~lk~ 99 (305)
.|+-+.|+||++.. +.++ ++. ... .+..-++..||.++.-+.+ ..+++++..+..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 47788999998641 2222 221 122 2333456689998765433 335666666643
Q ss_pred hCCCcEEEECCCcchh
Q 021939 100 RYPDRITLIRGNHESR 115 (305)
Q Consensus 100 ~~p~~v~~lrGNHE~~ 115 (305)
=.+..||||.-
T Consensus 87 -----Da~tlGNHEFd 97 (282)
T cd07407 87 -----DLLTIGNHELY 97 (282)
T ss_pred -----cEEeecccccC
Confidence 34788999984
No 110
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=88.92 E-value=0.56 Score=44.10 Aligned_cols=64 Identities=27% Similarity=0.268 Sum_probs=41.5
Q ss_pred cceeeccCCCHH------HHHHHHHhcCC-----CCCcEEEEeCcccCCCCC-------------hHHHHHHHHhchhhC
Q 021939 46 VTICGDIHGQFY------DMKELFKVGGD-----CPKTNYLFLGDFVDRGFY-------------SVETFLLLLALKVRY 101 (305)
Q Consensus 46 i~viGDIHG~~~------~L~~il~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~lk~~~ 101 (305)
|+-+.|+||++. .+..+++.... .+..-++..||.+..++. ...+++++.++...
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D- 81 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ- 81 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc-
Confidence 566789999964 34334443221 334566778999876543 44567777777654
Q ss_pred CCcEEEECCCcch
Q 021939 102 PDRITLIRGNHES 114 (305)
Q Consensus 102 p~~v~~lrGNHE~ 114 (305)
.+..||||.
T Consensus 82 ----a~tlGNHEF 90 (313)
T cd08162 82 ----AIALGNHEF 90 (313)
T ss_pred ----EEecccccc
Confidence 377999996
No 111
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=88.48 E-value=0.31 Score=47.73 Aligned_cols=43 Identities=23% Similarity=0.375 Sum_probs=35.9
Q ss_pred CCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhh
Q 021939 70 PKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQI 117 (305)
Q Consensus 70 ~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 117 (305)
-.|.+-.+||+-||||.+-.+++-|..+ ..+=+-.||||--++
T Consensus 190 vVDhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 190 VVDHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hhhheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 4678899999999999999999988876 356677899998544
No 112
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=88.39 E-value=0.49 Score=47.49 Aligned_cols=68 Identities=25% Similarity=0.259 Sum_probs=45.1
Q ss_pred cCCcceeeccCCCHH------------HHH---HHHHhcC-CCCCcEEEEeCcccCCCC------ChHHHHHHHHhchhh
Q 021939 43 DAPVTICGDIHGQFY------------DMK---ELFKVGG-DCPKTNYLFLGDFVDRGF------YSVETFLLLLALKVR 100 (305)
Q Consensus 43 ~~~i~viGDIHG~~~------------~L~---~il~~~~-~~~~~~~vfLGD~vDrG~------~s~evl~~l~~lk~~ 100 (305)
+..|+-..|+||++. .+. .+++... ..++..+|=.||+++..+ .....+.++..++-.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 345888999999998 333 3333222 223445666899999844 344577778777643
Q ss_pred CCCcEEEECCCcchh
Q 021939 101 YPDRITLIRGNHESR 115 (305)
Q Consensus 101 ~p~~v~~lrGNHE~~ 115 (305)
.+..||||.-
T Consensus 106 -----a~tiGNHEFd 115 (517)
T COG0737 106 -----AMTLGNHEFD 115 (517)
T ss_pred -----EEeecccccc
Confidence 3778999984
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=87.74 E-value=0.54 Score=43.51 Aligned_cols=65 Identities=22% Similarity=0.133 Sum_probs=38.0
Q ss_pred cceeeccCCCHHH----------HHHHHHhcCC-----CCCcEEEEeCcccCCCCC-----hHHHHHHHHhchhhCCCcE
Q 021939 46 VTICGDIHGQFYD----------MKELFKVGGD-----CPKTNYLFLGDFVDRGFY-----SVETFLLLLALKVRYPDRI 105 (305)
Q Consensus 46 i~viGDIHG~~~~----------L~~il~~~~~-----~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~v 105 (305)
|+.+.|+||++.. +..+++.... .+..-++-.||.+...+. ...+++++.++... +
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D----a 78 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD----A 78 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----E
Confidence 5678999998533 3344433221 334456668999844332 23455666666432 3
Q ss_pred EEECCCcchh
Q 021939 106 TLIRGNHESR 115 (305)
Q Consensus 106 ~~lrGNHE~~ 115 (305)
+..||||.-
T Consensus 79 -~~~GNHEfD 87 (285)
T cd07405 79 -MAVGNHEFD 87 (285)
T ss_pred -Eeecccccc
Confidence 445999974
No 114
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=86.95 E-value=1.3 Score=38.60 Aligned_cols=72 Identities=11% Similarity=0.169 Sum_probs=40.5
Q ss_pred cceeeccCCC-----HHHHHHHHHhcC-CCCCcEEEEeCcccCCCCChH----------HHHHHHHhchhhCC-----Cc
Q 021939 46 VTICGDIHGQ-----FYDMKELFKVGG-DCPKTNYLFLGDFVDRGFYSV----------ETFLLLLALKVRYP-----DR 104 (305)
Q Consensus 46 i~viGDIHG~-----~~~L~~il~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~lk~~~p-----~~ 104 (305)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+...++ -+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4567777755 455777777776 667789999999999733221 11222222222211 38
Q ss_pred EEEECCCcchhhh
Q 021939 105 ITLIRGNHESRQI 117 (305)
Q Consensus 105 v~~lrGNHE~~~~ 117 (305)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997543
No 115
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=86.43 E-value=0.72 Score=47.79 Aligned_cols=69 Identities=20% Similarity=0.237 Sum_probs=44.8
Q ss_pred ecCCcceeeccCCCHHH----------------HHHHHHhcC-CCCCcEEEEeCcccCCCCChH-------------HHH
Q 021939 42 VDAPVTICGDIHGQFYD----------------MKELFKVGG-DCPKTNYLFLGDFVDRGFYSV-------------ETF 91 (305)
Q Consensus 42 i~~~i~viGDIHG~~~~----------------L~~il~~~~-~~~~~~~vfLGD~vDrG~~s~-------------evl 91 (305)
++.+|.-..|+||++.. +..+++... ..+..-+|-.||.+...+.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45568889999999742 334444332 224456677999998666431 366
Q ss_pred HHHHhchhhCCCcEEEECCCcchh
Q 021939 92 LLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 92 ~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
..+..|.. =....||||.-
T Consensus 104 ~amN~lgy-----Da~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEFN 122 (649)
T ss_pred HHHHhcCC-----cEEeccchhhh
Confidence 77777654 34788999963
No 116
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=86.09 E-value=0.73 Score=47.51 Aligned_cols=66 Identities=20% Similarity=0.192 Sum_probs=41.8
Q ss_pred CcceeeccCCCHHH----------------HHHHHHhcCC-CCCcEEEEeCcccCCCCCh-------------HHHHHHH
Q 021939 45 PVTICGDIHGQFYD----------------MKELFKVGGD-CPKTNYLFLGDFVDRGFYS-------------VETFLLL 94 (305)
Q Consensus 45 ~i~viGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~vDrG~~s-------------~evl~~l 94 (305)
+|+-..|+||++.. +..+++.... .+..-++-.||.+...+.+ ..++..+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 46778999999742 3344443322 2345566699999865533 2356666
Q ss_pred HhchhhCCCcEEEECCCcchh
Q 021939 95 LALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 95 ~~lk~~~p~~v~~lrGNHE~~ 115 (305)
..|.. =....||||.-
T Consensus 84 N~lgy-----Da~tlGNHEFd 99 (626)
T TIGR01390 84 NLLKY-----DVGNLGNHEFN 99 (626)
T ss_pred hhcCc-----cEEeccccccc
Confidence 66643 34788999963
No 117
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=85.05 E-value=0.92 Score=50.16 Aligned_cols=66 Identities=24% Similarity=0.261 Sum_probs=40.8
Q ss_pred CCcceeeccCCCHH----------------HHHHHHHhcCCC-CCcEEEEeCcccCCCCC--------------hHHHHH
Q 021939 44 APVTICGDIHGQFY----------------DMKELFKVGGDC-PKTNYLFLGDFVDRGFY--------------SVETFL 92 (305)
Q Consensus 44 ~~i~viGDIHG~~~----------------~L~~il~~~~~~-~~~~~vfLGD~vDrG~~--------------s~evl~ 92 (305)
-.|+...|+||++. .+..+++..... +..-++-.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 45889999999863 234445433222 33344448999986651 224566
Q ss_pred HHHhchhhCCCcEEEECCCcch
Q 021939 93 LLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 93 ~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
.+..+.. =....||||.
T Consensus 122 ~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 122 AMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHhhcCc-----cEEeeccccc
Confidence 6666543 3467999997
No 118
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.03 E-value=3 Score=35.03 Aligned_cols=99 Identities=23% Similarity=0.314 Sum_probs=65.7
Q ss_pred cceeeccCCC--HHHHHHHHHhcCCCCC-cEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcC
Q 021939 46 VTICGDIHGQ--FYDMKELFKVGGDCPK-TNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYG 122 (305)
Q Consensus 46 i~viGDIHG~--~~~L~~il~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 122 (305)
+.++||+|=- ..+|-.-|+..--|++ ..++++|++. |.|++++|..+. +.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 5689999953 3345455554444543 5799999976 889999999885 5899999987653
Q ss_pred ChHHHHHhhCCcccccccchhhhccccchhe---eccEEEecCCCCCCCCChhhhhhhccccc
Q 021939 123 FYDECLRKYGSVNVWRYCTDIFDYLSLSALI---ENKIFSVHGGLSPAISTLDQIRTIDRKQE 182 (305)
Q Consensus 123 f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~il~vHgGi~p~~~~~~~i~~i~r~~~ 182 (305)
.+| |..-++ .=++-|+||-.--.|...+.+..+.|..+
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhqViP~gd~~sL~~LaRqld 107 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQVIPWGDPESLALLARQLD 107 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcEeecCCCHHHHHHHHHhcC
Confidence 122 222222 23788999975444666667776666554
No 119
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=82.12 E-value=2 Score=40.74 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=40.8
Q ss_pred CcceeeccCCCHH-----------------HHH--HHH-HhcCCCCCcEEEEeCcccCCCCChHH---HHHHHHhchhhC
Q 021939 45 PVTICGDIHGQFY-----------------DMK--ELF-KVGGDCPKTNYLFLGDFVDRGFYSVE---TFLLLLALKVRY 101 (305)
Q Consensus 45 ~i~viGDIHG~~~-----------------~L~--~il-~~~~~~~~~~~vfLGD~vDrG~~s~e---vl~~l~~lk~~~ 101 (305)
+|+.+.|+|=... |+. ..+ +.+.....|.+||+||.|+. ..... ++.-..+-.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 4788999985554 221 111 33445567899999999987 33322 222222222222
Q ss_pred CCcEEEECCCcchhh
Q 021939 102 PDRITLIRGNHESRQ 116 (305)
Q Consensus 102 p~~v~~lrGNHE~~~ 116 (305)
.==..++.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 112457899999964
No 120
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=81.88 E-value=1.6 Score=46.31 Aligned_cols=67 Identities=19% Similarity=0.203 Sum_probs=42.5
Q ss_pred CCcceeeccCCCHHH----------------HHHHHHhcC-CCCCcEEEEeCcccCCCCCh--------------HHHHH
Q 021939 44 APVTICGDIHGQFYD----------------MKELFKVGG-DCPKTNYLFLGDFVDRGFYS--------------VETFL 92 (305)
Q Consensus 44 ~~i~viGDIHG~~~~----------------L~~il~~~~-~~~~~~~vfLGD~vDrG~~s--------------~evl~ 92 (305)
.+|+-..|+||++.. +..+++... ..++.-+|-.||.+..-+.+ ..++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 458889999999642 233343332 22345667799999765432 23677
Q ss_pred HHHhchhhCCCcEEEECCCcchh
Q 021939 93 LLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 93 ~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
.+..|... ....||||+-
T Consensus 196 amN~LGyD-----A~tLGNHEFD 213 (814)
T PRK11907 196 ALEALGFD-----AGTLGNHEFN 213 (814)
T ss_pred HHhccCCC-----EEEechhhcc
Confidence 77777543 4788999973
No 121
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.80 E-value=3.6 Score=40.47 Aligned_cols=69 Identities=19% Similarity=0.323 Sum_probs=51.6
Q ss_pred cCCcceeeccCCCHHHHHHHHHhcCC--CCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCc
Q 021939 43 DAPVTICGDIHGQFYDMKELFKVGGD--CPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNH 112 (305)
Q Consensus 43 ~~~i~viGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 112 (305)
+.+|.|+||.-|+++.|.+-.+.... .+-+-++++|++.+....+-|++.+...- ...|--+|++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 46899999999999998766654432 24688999999999877788888776654 34465677776665
No 122
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=79.59 E-value=3 Score=42.31 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=27.4
Q ss_pred CCcEEEEeCcccCCCCCh-----HHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 70 PKTNYLFLGDFVDRGFYS-----VETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 70 ~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
+..-++..||.+...+.+ ...++++.++.. -.+..||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g~-----Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAGF-----DFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccCC-----CEEEecccccc
Confidence 455677799998765533 335666666654 34788999973
No 123
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=78.30 E-value=2.2 Score=43.28 Aligned_cols=68 Identities=22% Similarity=0.167 Sum_probs=40.3
Q ss_pred cCCcceeeccCCCHH----------HHHHHHHhcC-----CCCCcEEEEeCcccCCCCCh-----HHHHHHHHhchhhCC
Q 021939 43 DAPVTICGDIHGQFY----------DMKELFKVGG-----DCPKTNYLFLGDFVDRGFYS-----VETFLLLLALKVRYP 102 (305)
Q Consensus 43 ~~~i~viGDIHG~~~----------~L~~il~~~~-----~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p 102 (305)
+..|+-+.|+||++. .+..+++... ..+..-++..||.+...+.+ ..+++++..+..
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~--- 110 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY--- 110 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC---
Confidence 345888999999874 1233343221 13445566689998644322 235566666643
Q ss_pred CcEEEECCCcchh
Q 021939 103 DRITLIRGNHESR 115 (305)
Q Consensus 103 ~~v~~lrGNHE~~ 115 (305)
.+ +..||||.-
T Consensus 111 -Da-~tlGNHEFD 121 (551)
T PRK09558 111 -DA-MAVGNHEFD 121 (551)
T ss_pred -CE-EcccccccC
Confidence 23 445999974
No 124
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=78.23 E-value=4.4 Score=36.99 Aligned_cols=66 Identities=21% Similarity=0.169 Sum_probs=45.8
Q ss_pred CcceeeccCCCHHH--HHHHHHhcC-CCCCcEEEEeCcccCCC-CChHHHHHHHHhchhhCCCcEEEECCCcchh
Q 021939 45 PVTICGDIHGQFYD--MKELFKVGG-DCPKTNYLFLGDFVDRG-FYSVETFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 45 ~i~viGDIHG~~~~--L~~il~~~~-~~~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
++.++|||=|..-. +...|.... ..+.+-++..||..-.| .-+.++...|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 46789999998754 455664432 22456677789998766 4677888888887653 4444 999863
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=76.26 E-value=3.6 Score=39.96 Aligned_cols=70 Identities=10% Similarity=0.036 Sum_probs=41.8
Q ss_pred CcceeeccC-CCHHHH--HHHH-HhcCCCCCcEEEEeCcccCCCCChHH------HHHHHHhchh-hCCCcEEEECCCcc
Q 021939 45 PVTICGDIH-GQFYDM--KELF-KVGGDCPKTNYLFLGDFVDRGFYSVE------TFLLLLALKV-RYPDRITLIRGNHE 113 (305)
Q Consensus 45 ~i~viGDIH-G~~~~L--~~il-~~~~~~~~~~~vfLGD~vDrG~~s~e------vl~~l~~lk~-~~p~~v~~lrGNHE 113 (305)
+.+++||-= |..... .+.+ +.+...+.+-++-+||-++.|..++. ..+.+..-.. .-.--.+++.||||
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHD 107 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQAD 107 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccc
Confidence 589999953 333221 1222 33445677889999998888877543 3333332211 00014899999999
Q ss_pred h
Q 021939 114 S 114 (305)
Q Consensus 114 ~ 114 (305)
.
T Consensus 108 y 108 (394)
T PTZ00422 108 W 108 (394)
T ss_pred c
Confidence 7
No 126
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=74.95 E-value=6.1 Score=39.73 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=40.2
Q ss_pred CCcceeeccCC------------CHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHH
Q 021939 44 APVTICGDIHG------------QFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLL 95 (305)
Q Consensus 44 ~~i~viGDIHG------------~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~ 95 (305)
.+|.|-.|+|= .+..|.++|..+.....|.++.-||++.-..-|..+|.-..
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i 77 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCL 77 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHH
Confidence 45888889883 45668899988888888999999999988777766554333
No 127
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=73.40 E-value=3.8 Score=43.38 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=42.3
Q ss_pred ecCCcceeeccCCCHHH----------------HHHHHHhcC-CCCCcEEEEeCcccCCCCC------------------
Q 021939 42 VDAPVTICGDIHGQFYD----------------MKELFKVGG-DCPKTNYLFLGDFVDRGFY------------------ 86 (305)
Q Consensus 42 i~~~i~viGDIHG~~~~----------------L~~il~~~~-~~~~~~~vfLGD~vDrG~~------------------ 86 (305)
++-+|+-..|+||++.. +..+++... ..+..-+|-.||.+-.-+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 34568999999999632 233343332 2244566778998854332
Q ss_pred -hHHHHHHHHhchhhCCCcEEEECCCcch
Q 021939 87 -SVETFLLLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 87 -s~evl~~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
...++.++..|... ....||||.
T Consensus 118 ~~~p~i~~mN~lgyD-----a~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKYD-----VISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCCC-----EEecccccc
Confidence 13466777777543 477899996
No 128
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=71.61 E-value=5.1 Score=39.46 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=24.6
Q ss_pred hhhhchhcCCceEEEecccceecceEEecCCeE
Q 021939 219 VVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQI 251 (305)
Q Consensus 219 ~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~ 251 (305)
.+++.+-+++++.++-||.-.-+....-.+.++
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 688899999999999999866555444345444
No 129
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=68.16 E-value=14 Score=34.34 Aligned_cols=72 Identities=17% Similarity=0.234 Sum_probs=46.4
Q ss_pred CCcceeeccCC----CHHHHHHHHHhcC-C-C---CCcEEEEeCcccCCC----CCh----HHHHHHHHh-chhhCC---
Q 021939 44 APVTICGDIHG----QFYDMKELFKVGG-D-C---PKTNYLFLGDFVDRG----FYS----VETFLLLLA-LKVRYP--- 102 (305)
Q Consensus 44 ~~i~viGDIHG----~~~~L~~il~~~~-~-~---~~~~~vfLGD~vDrG----~~s----~evl~~l~~-lk~~~p--- 102 (305)
..++|+||+|= .++.|.++|+... . + ....+|+.|+++-+. ..+ .+-.+-|.. +...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 45889999995 4566777776552 2 1 245789999998663 222 233444443 233455
Q ss_pred --CcEEEECCCcchh
Q 021939 103 --DRITLIRGNHESR 115 (305)
Q Consensus 103 --~~v~~lrGNHE~~ 115 (305)
.++++++|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 4899999999964
No 130
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=65.71 E-value=31 Score=30.15 Aligned_cols=85 Identities=19% Similarity=0.255 Sum_probs=55.1
Q ss_pred cEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcchhhhhhhcCChH---HHH-------------HhhCCcc
Q 021939 72 TNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYD---ECL-------------RKYGSVN 135 (305)
Q Consensus 72 ~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~---e~~-------------~~~~~~~ 135 (305)
..+|++| -|.+.-|.+.++..|+..|-++-+. .|+-|.|..++...|.. ++. +.| -.+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 5689998 6889999999999999998766655 89999988776544431 111 111 123
Q ss_pred cccccchhhhccccchheeccEEEecC
Q 021939 136 VWRYCTDIFDYLSLSALIENKIFSVHG 162 (305)
Q Consensus 136 ~~~~~~~~f~~LP~~~~i~~~il~vHg 162 (305)
+|..+.....++++..-+-.+++.+.|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 444555555555555555445555555
No 131
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=63.33 E-value=7.7 Score=35.89 Aligned_cols=67 Identities=25% Similarity=0.365 Sum_probs=42.2
Q ss_pred Ccceeecc--CCCHHHHHHHHHh---cCCCCCcEEEEeCcc-cCCCCChHH------HHHHHHh---chhhCCCcEEEEC
Q 021939 45 PVTICGDI--HGQFYDMKELFKV---GGDCPKTNYLFLGDF-VDRGFYSVE------TFLLLLA---LKVRYPDRITLIR 109 (305)
Q Consensus 45 ~i~viGDI--HG~~~~L~~il~~---~~~~~~~~~vfLGD~-vDrG~~s~e------vl~~l~~---lk~~~p~~v~~lr 109 (305)
++.||||- +|.+..-+..++. .....-+-++.+||= -|-|..+.- ...-+.. |+ .-.+.+.
T Consensus 45 sflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy~vl 120 (336)
T KOG2679|consen 45 SFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWYSVL 120 (336)
T ss_pred EEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchhhhc
Confidence 48999994 7888776555532 334466788999994 466664421 2222221 22 2467899
Q ss_pred CCcchh
Q 021939 110 GNHESR 115 (305)
Q Consensus 110 GNHE~~ 115 (305)
||||.+
T Consensus 121 GNHDyr 126 (336)
T KOG2679|consen 121 GNHDYR 126 (336)
T ss_pred cCcccc
Confidence 999985
No 132
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=60.43 E-value=11 Score=34.91 Aligned_cols=62 Identities=24% Similarity=0.297 Sum_probs=40.8
Q ss_pred CcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHH---HHhchhhCCCcEEEECCCcchhh
Q 021939 45 PVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLL---LLALKVRYPDRITLIRGNHESRQ 116 (305)
Q Consensus 45 ~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~---l~~lk~~~p~~v~~lrGNHE~~~ 116 (305)
+.+.|+|.|+...+.. ..|..|-++-+||+-.-|. +-||..+ +-+|.-. .=+.|+||||.-.
T Consensus 63 r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~---yKIVIaGNHELtF 127 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHE---YKIVIAGNHELTF 127 (305)
T ss_pred EEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcce---eeEEEeeccceee
Confidence 4899999999754432 3566778899999976554 3445433 3333222 3458999999843
No 133
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=56.22 E-value=50 Score=30.01 Aligned_cols=57 Identities=18% Similarity=0.318 Sum_probs=30.3
Q ss_pred CcEEEECCCcchhhhhhhcCChHHHHHhhCCcc-cccccchhhhccccchhe-eccEEEecCCCCC
Q 021939 103 DRITLIRGNHESRQITQVYGFYDECLRKYGSVN-VWRYCTDIFDYLSLSALI-ENKIFSVHGGLSP 166 (305)
Q Consensus 103 ~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~-~~~~~~~~f~~LP~~~~i-~~~il~vHgGi~p 166 (305)
++|++|-||||.-. +..| ..++.... .-..--..+..+|.+-.- ..+++..|-||-.
T Consensus 128 knvvvlagnhein~-ngny------~arlanhkls~gDTYnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 128 KNVVVLAGNHEINF-NGNY------MARLANHKLSAGDTYNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred cceEEEecCceecc-CchH------HHHHhhCCCCccchhhccccccccccCcchhhhhcccCcee
Confidence 58999999999732 2222 22221111 011112344556665433 3468888888854
No 134
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=55.22 E-value=42 Score=24.88 Aligned_cols=69 Identities=14% Similarity=0.054 Sum_probs=46.6
Q ss_pred CCcceeeccCCCHHHHHHHHHhcC--CCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCc
Q 021939 44 APVTICGDIHGQFYDMKELFKVGG--DCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNH 112 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 112 (305)
..+.|+=|---|.+.+..+++... .+....++.+|+.-|+|..+.+....+.++...+.+.+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 456788886677788888886553 235667888999999888888766667766666656655555543
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=52.96 E-value=10 Score=38.85 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=46.9
Q ss_pred EeCchhhhhchhcCCce----EEEeccccee--cceEE-ecCCeEEEEEc--CCCCCccCCCeEEEEEEcCCCCeEEEEE
Q 021939 214 LFGGSVVTSFNHSNNID----YICRAHQLVM--EGYKW-MFNNQIVTVWS--APNYCYRCGNVAAILELDENLNKQFRVF 284 (305)
Q Consensus 214 ~fG~~~~~~fl~~~~~~----~iirgH~~~~--~G~~~-~~~~~~itifS--a~~y~~~~~N~~avl~i~~~~~~~~~~~ 284 (305)
.-.++...+.|+..|++ .||-||.||. +|=.. .++||++.|.- |..|...++ -|+.-.|..+--.+.++=
T Consensus 505 ~~~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskAYqk~TG-IAGYTLiyNS~gl~L~~H 583 (640)
T PF06874_consen 505 REDEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKAYQKTTG-IAGYTLIYNSYGLQLVAH 583 (640)
T ss_pred ccCHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhhhccccC-ccceEEEecCCcceeccC
Confidence 34677888889999998 9999999996 66443 45999999944 234554444 344444443434444444
Q ss_pred ec
Q 021939 285 DA 286 (305)
Q Consensus 285 ~~ 286 (305)
+|
T Consensus 584 ~p 585 (640)
T PF06874_consen 584 QP 585 (640)
T ss_pred CC
Confidence 44
No 136
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=45.47 E-value=16 Score=33.62 Aligned_cols=39 Identities=26% Similarity=0.427 Sum_probs=26.7
Q ss_pred EEEEeCcccCCCCChHH-HHHHHHhchhhCCCcEEEECCCcchh
Q 021939 73 NYLFLGDFVDRGFYSVE-TFLLLLALKVRYPDRITLIRGNHESR 115 (305)
Q Consensus 73 ~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~ 115 (305)
+++|+||+|.+ ...+ +-..|-++|.+++..+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 68999999944 3344 3467788888887665554 55554
No 137
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=42.70 E-value=20 Score=32.75 Aligned_cols=39 Identities=28% Similarity=0.310 Sum_probs=27.6
Q ss_pred EEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEEECCCcch
Q 021939 73 NYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES 114 (305)
Q Consensus 73 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 114 (305)
+++|+||+|.+.-.. .+-..|.++|.+|+..+++. |=|.
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 479999999775433 36677888888887666555 4444
No 138
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=38.45 E-value=1.7e+02 Score=22.09 Aligned_cols=90 Identities=14% Similarity=0.087 Sum_probs=48.9
Q ss_pred HhhCCCCCHHHHHHHHHHHHHHHhhCCCeeeecCC-----cceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCcccCCCC
Q 021939 11 LKKCEPLKESEVKALCLKAMEILVEESNVQRVDAP-----VTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGF 85 (305)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~il~~ep~l~~i~~~-----i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~ 85 (305)
......++.+++.++++.. ....++.+..+ -.+-|=+|=-+..|...+......++..+++. ...|.
T Consensus 6 ~~~~~~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~ 77 (109)
T cd01533 6 VRHTPSVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRT 77 (109)
T ss_pred cccCCcCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCc
Confidence 3344457777766655321 01245565433 23344445456666666655554445566665 46778
Q ss_pred ChHHHHHHHHhchhhCCCcEEEECC
Q 021939 86 YSVETFLLLLALKVRYPDRITLIRG 110 (305)
Q Consensus 86 ~s~evl~~l~~lk~~~p~~v~~lrG 110 (305)
.|......|..+. |++.++.|.|
T Consensus 78 rs~~a~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 78 RSIIGAQSLINAG--LPNPVAALRN 100 (109)
T ss_pred hHHHHHHHHHHCC--CCcceeEecC
Confidence 8877777666553 3222666655
No 139
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=34.52 E-value=37 Score=33.80 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=38.8
Q ss_pred CchhhhhchhcCCce----EEEecccceec--ceE-EecCCeEEEEEc--CCCCCccCCCeEEEEEEc
Q 021939 216 GGSVVTSFNHSNNID----YICRAHQLVME--GYK-WMFNNQIVTVWS--APNYCYRCGNVAAILELD 274 (305)
Q Consensus 216 G~~~~~~fl~~~~~~----~iirgH~~~~~--G~~-~~~~~~~itifS--a~~y~~~~~N~~avl~i~ 274 (305)
.++.+.+.|+..|++ .||-||.|+.+ |-. .-++|++|-|.- |..|...++=.|-.|..+
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTllYN 581 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLLYN 581 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEeeec
Confidence 456777888888887 79999999864 322 134899998844 345655555444444443
No 140
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=34.28 E-value=68 Score=21.63 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=25.4
Q ss_pred CccHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
Q 021939 1 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVE 35 (305)
Q Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ 35 (305)
|..++.+++++.++ .++-++...+.+++..+++.
T Consensus 5 ~~~Le~Iv~~Le~~-~~sLdes~~lyeeg~~l~~~ 38 (53)
T PF02609_consen 5 MERLEEIVEKLESG-ELSLDESLKLYEEGMELIKK 38 (53)
T ss_dssp HHHHHHHHHHHHTT--S-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 34678888888875 67889999999998888753
No 141
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=31.14 E-value=60 Score=29.64 Aligned_cols=11 Identities=27% Similarity=0.646 Sum_probs=5.1
Q ss_pred CcceeeccCCC
Q 021939 45 PVTICGDIHGQ 55 (305)
Q Consensus 45 ~i~viGDIHG~ 55 (305)
++.++||+-|.
T Consensus 2 riLfiGDvvGk 12 (266)
T COG1692 2 RILFIGDVVGK 12 (266)
T ss_pred eEEEEecccCc
Confidence 34444554443
No 142
>PRK14070 exodeoxyribonuclease VII small subunit; Provisional
Probab=30.57 E-value=1.2e+02 Score=21.88 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=27.4
Q ss_pred CccHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
Q 021939 1 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVE 35 (305)
Q Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ 35 (305)
|+.++++++.+-++ .++-++.+.+.+++.++++.
T Consensus 1 m~~LEeIV~~LE~g-el~Leesl~lyeeG~~L~k~ 34 (69)
T PRK14070 1 MKELEEIVNRLENE-DLPLEESIKLFERGVELYRK 34 (69)
T ss_pred CHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHH
Confidence 67788988888776 57888888888888887764
No 143
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=30.34 E-value=1.8e+02 Score=28.49 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=47.5
Q ss_pred cCCcceeeccCC-CHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhC-CCcEEEECC
Q 021939 43 DAPVTICGDIHG-QFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRY-PDRITLIRG 110 (305)
Q Consensus 43 ~~~i~viGDIHG-~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~lrG 110 (305)
...+.||=|-++ +.+.+...|+.....+..+++.+||+...|+.+.+.-.-+-++-... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 345888999665 57888888876654345679999999999999988776665543333 3556544 6
No 144
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=25.47 E-value=3.1e+02 Score=23.00 Aligned_cols=53 Identities=21% Similarity=0.277 Sum_probs=37.3
Q ss_pred ceeeccCCCHHHHHHHH-HhcCC------------CCCcEEEEeCcccCCCCChHHHHHHHHhchh
Q 021939 47 TICGDIHGQFYDMKELF-KVGGD------------CPKTNYLFLGDFVDRGFYSVETFLLLLALKV 99 (305)
Q Consensus 47 ~viGDIHG~~~~L~~il-~~~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~ 99 (305)
++.+=.+||-..+.+.+ +.++. ..+--+||+|=-+|+|.-+-++..+|..|+-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~ 67 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG 67 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC
Confidence 34455667766665444 22222 2345699999999999999999999999753
No 145
>PRK04531 acetylglutamate kinase; Provisional
Probab=23.37 E-value=1.2e+02 Score=29.52 Aligned_cols=23 Identities=22% Similarity=0.158 Sum_probs=14.5
Q ss_pred hhhhccccchheeccEEEecCCC
Q 021939 142 DIFDYLSLSALIENKIFSVHGGL 164 (305)
Q Consensus 142 ~~f~~LP~~~~i~~~il~vHgGi 164 (305)
.+.+.+-+-..++-+.+.||||=
T Consensus 54 ~l~~dla~L~~~G~~~VlVHGgg 76 (398)
T PRK04531 54 ALASSLSFLQEVGLTPIVVHGAG 76 (398)
T ss_pred HHHHHHHHHHHCCCcEEEEECCC
Confidence 34444444444566788899983
No 146
>PRK14066 exodeoxyribonuclease VII small subunit; Provisional
Probab=23.24 E-value=1.4e+02 Score=21.86 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=24.8
Q ss_pred ccHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
Q 021939 2 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVE 35 (305)
Q Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ 35 (305)
+.++++++++-++ -++-++.+.+.+++.++.+.
T Consensus 11 ~~LE~IV~~LE~g-~l~Leesl~lyeeG~~L~k~ 43 (75)
T PRK14066 11 KKLEEVVKKLEGG-ELSLDDSLKAFEEGVKHAAF 43 (75)
T ss_pred HHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHH
Confidence 4567777777655 57888888888888888764
No 147
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=21.98 E-value=3.3e+02 Score=26.24 Aligned_cols=67 Identities=22% Similarity=0.237 Sum_probs=44.8
Q ss_pred CCcceeeccC-CCHHHHHHHHHhcCCCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCC-CcEEEECCC
Q 021939 44 APVTICGDIH-GQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYP-DRITLIRGN 111 (305)
Q Consensus 44 ~~i~viGDIH-G~~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p-~~v~~lrGN 111 (305)
..+.+|=|-+ .+.+.+...|+.....+..+++.+|+...-|..+.+.-..+.+....+. +.+++ -|.
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~-~g~ 364 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFL-VGE 364 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEE-ECH
Confidence 4578888855 4888899888766543346788899998888887765555544433333 45555 353
No 148
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=20.78 E-value=1.1e+02 Score=27.68 Aligned_cols=72 Identities=13% Similarity=0.155 Sum_probs=45.6
Q ss_pred CchhhhhchhcCCceEEEecccceecceEEecCCeEEEEEcCCCCCccC---CCeEEEEEEcCCCCeEEEEEecCCCC
Q 021939 216 GGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRC---GNVAAILELDENLNKQFRVFDAAPQE 290 (305)
Q Consensus 216 G~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~---~N~~avl~i~~~~~~~~~~~~~~~~~ 290 (305)
....+.+||+.+|..+ -+|++.+||.|.+++-.|+||---..-... .+.-+.-.++..+..-+..+-..+..
T Consensus 139 ~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~ri~~~~~~~~~~~~~~~l~~~d~s~~~lv~a~v~v~~~ 213 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELFRIFKVPPPGQYPPPFDKLKPLDPSGSWLVEASVNVPDG 213 (250)
T ss_dssp SSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEEEEEEEETTCCE---SS-EEECTTTTEEEEEEEEEESTT
T ss_pred CCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEEEEEecCCCCCCCCCcccCCccCCCCCEEEEEEEEccCC
Confidence 5677889999999764 588999999999988777776532211100 12234455566666666666665544
No 149
>KOG2463 consensus Predicted RNA-binding protein Nob1p involved in 26S proteasome assembly [Posttranslational modification, protein turnover, chaperones]
Probab=20.61 E-value=2.3e+02 Score=27.04 Aligned_cols=81 Identities=15% Similarity=0.236 Sum_probs=52.8
Q ss_pred ceEEeCchhhhhchhcCCceEEEecc-cce-ecceEEecCCeEEEEEcC--CCCCccCCCe---EEEEEEcCCCCeEEEE
Q 021939 211 AGFLFGGSVVTSFNHSNNIDYICRAH-QLV-MEGYKWMFNNQIVTVWSA--PNYCYRCGNV---AAILELDENLNKQFRV 283 (305)
Q Consensus 211 ~~~~fG~~~~~~fl~~~~~~~iirgH-~~~-~~G~~~~~~~~~itifSa--~~y~~~~~N~---~avl~i~~~~~~~~~~ 283 (305)
.+++-|.-+++.+|-.+|+.++--+- ... -.-|...|. .|+||||- -.||-.++|. -+-+.++++|..+.+.
T Consensus 207 Vac~TtDfamQNVlLqm~L~l~~~~G~~Ir~~r~~iLRCh-~Cfsit~~m~k~FCp~CG~~TL~K~aVsv~~dG~~~~h~ 285 (376)
T KOG2463|consen 207 VACLTTDFAMQNVLLQMNLNLLAMSGMKIRSVRSYILRCH-GCFSITSEMPKDFCPSCGHKTLTKCAVSVDEDGNGQTHF 285 (376)
T ss_pred eeeecccHHHHHHHHHhcccccCccchhhhhhhhheeEee-eeeEecCccchhcccccCCCeeeEEEEEecCCCceeEEe
Confidence 46788999999999999998763110 000 122334443 48888884 4688888875 3446788898888776
Q ss_pred EecCCCCCC
Q 021939 284 FDAAPQESR 292 (305)
Q Consensus 284 ~~~~~~~~~ 292 (305)
....++-.|
T Consensus 286 k~r~~~n~R 294 (376)
T KOG2463|consen 286 KKRFQWNNR 294 (376)
T ss_pred ecccccccC
Confidence 655554444
No 150
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.52 E-value=3.1e+02 Score=21.15 Aligned_cols=34 Identities=29% Similarity=0.638 Sum_probs=19.2
Q ss_pred CCCCcEEEEeCcccCCCCChHHHHHHHHhchhhCCCcEEE
Q 021939 68 DCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITL 107 (305)
Q Consensus 68 ~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 107 (305)
.-|+.++|++|| -|..-.|+..-+. ..||++|..
T Consensus 61 ~fP~~kfiLIGD---sgq~DpeiY~~ia---~~~P~~i~a 94 (100)
T PF09949_consen 61 DFPERKFILIGD---SGQHDPEIYAEIA---RRFPGRILA 94 (100)
T ss_pred HCCCCcEEEEee---CCCcCHHHHHHHH---HHCCCCEEE
Confidence 345667777775 3444455554433 356776644
No 151
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.43 E-value=3.6e+02 Score=21.92 Aligned_cols=58 Identities=24% Similarity=0.265 Sum_probs=37.1
Q ss_pred HHHHHHHHHhcCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHh-chhhCCCcEEEE---CCCcch
Q 021939 56 FYDMKELFKVGGDCPKTNYLFLGDFVDRGFYS-----VETFLLLLA-LKVRYPDRITLI---RGNHES 114 (305)
Q Consensus 56 ~~~L~~il~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~-lk~~~p~~v~~l---rGNHE~ 114 (305)
++.|.+.++..+....-.++|+|+-.|++.+| +...-.+.. ++ .+|..++++ -||-+.
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk-~ap~~~~~v~v~VG~rp~ 78 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALK-HAPEDVHFVHVYVGNRPY 78 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHH-hCCCceEEEEEEecCCCc
Confidence 56788888877666666789999999987665 222223332 23 567655444 466555
No 152
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=20.24 E-value=1.5e+02 Score=20.72 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=18.1
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHHHH
Q 021939 4 LDRQIEQLKKCEPLKESEVKALCLKA 29 (305)
Q Consensus 4 ~~~~i~~~~~~~~~~~~~~~~l~~~~ 29 (305)
+..+|+++.+++.++.+++.++++..
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 56788999999999999998887654
No 153
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=20.16 E-value=2.1e+02 Score=26.99 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=27.7
Q ss_pred CCcceeeccCCCHHHHHHHHHhcCCCCCcEEEEeCccc
Q 021939 44 APVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFV 81 (305)
Q Consensus 44 ~~i~viGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~v 81 (305)
+.|..+.|+=|+=..|.++-+.. +.+.+||.||..
T Consensus 29 ~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 29 DEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred HHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 45889999999877777777654 577899999964
No 154
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=20.16 E-value=1.8e+02 Score=21.58 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=24.6
Q ss_pred ccHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
Q 021939 2 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVE 35 (305)
Q Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~il~~ 35 (305)
+.++.+++++-.+ .++-++...+.+++.++++.
T Consensus 17 ~~LEeIv~~LE~~-~l~Lees~~lyeeg~~L~k~ 49 (80)
T PRK00977 17 AELEEIVTRLESG-DLPLEESLAAFERGVALARQ 49 (80)
T ss_pred HHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHH
Confidence 4566777776655 67888888888888888765
Done!