BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021943
         (305 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A3CT23|KCY_METMJ Cytidylate kinase OS=Methanoculleus marisnigri (strain ATCC 35101 /
           DSM 1498 / JR1) GN=cmk PE=3 SV=1
          Length = 181

 Score = 37.0 bits (84), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 191 SGLFVSEEALNIWVSISLA----RLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCIS 246
           SG  V    L IW+S SL+    R+   DG  +  A +++ N     +T    Y+G+ I 
Sbjct: 84  SGRMVGNADLRIWLSASLSCRARRIAGRDGMDEEGARAYTENRQRSEATRYRNYYGIEID 143

Query: 247 DMIPF 251
           D+ P+
Sbjct: 144 DLSPY 148


>sp|Q6GZS5|051R_FRG3G Uncharacterized protein 051R OS=Frog virus 3 (isolate Goorha)
           GN=FV3-051R PE=4 SV=1
          Length = 561

 Score = 36.2 bits (82), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 12/103 (11%)

Query: 199 ALNIWVSISLARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGK-LF 257
           ALN+   ++LARLL L    +   +   R    + S  +   W VC S+ +  + GK LF
Sbjct: 454 ALNVISEMTLARLLDLPDIPEEVRQPTDREQAALGSDYVRSAWRVCYSEFVHKFEGKNLF 513

Query: 258 TKSGASDDVCSK-----LGISKEKALSI--TQSVQKYGNLIGF 293
               AS D C K     L +S++       T S + YG LI  
Sbjct: 514 ----ASVDYCVKTHLKALKVSRDSVTGTAKTLSAKGYGTLIAL 552


>sp|Q7RTW8|OTOAN_HUMAN Otoancorin OS=Homo sapiens GN=OTOA PE=2 SV=1
          Length = 1153

 Score = 33.1 bits (74), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 23/45 (51%)

Query: 219 QSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKLFTKSGAS 263
           Q F  +F+  +PY V+ + W YW V    M PF L  L  +  AS
Sbjct: 603 QDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAALPARYLAS 647


>sp|Q8K561|OTOAN_MOUSE Otoancorin OS=Mus musculus GN=Otoa PE=2 SV=1
          Length = 1137

 Score = 31.2 bits (69), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 21/39 (53%)

Query: 218 WQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKL 256
           +Q F  +FS  +P  V+ + W YW V  S M PF L  L
Sbjct: 588 FQYFDNNFSLLSPDQVNCLAWKYWEVSRSSMPPFLLATL 626


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.135    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,817,305
Number of Sequences: 539616
Number of extensions: 4520299
Number of successful extensions: 12497
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12494
Number of HSP's gapped (non-prelim): 7
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)