Query 021943
Match_columns 305
No_of_seqs 19 out of 21
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 11:39:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021943.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021943hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u0ma2 c.95.1.2 (A:202-349) P 73.8 0.7 5.1E-05 35.3 2.0 28 264-291 77-104 (148)
2 d1bi5a2 c.95.1.2 (A:236-389) C 60.4 1.9 0.00014 33.4 2.0 28 264-291 76-103 (154)
3 d1ee0a2 c.95.1.2 (A:236-395) P 52.7 2.4 0.00017 33.0 1.5 28 264-291 81-108 (160)
4 d1teda_ c.95.1.2 (A:) Polyketi 50.4 3.1 0.00023 34.5 1.9 29 263-291 299-327 (372)
5 d1mzja2 c.95.1.2 (A:184-336) P 43.9 0.99 7.2E-05 34.6 -2.1 25 264-290 82-106 (153)
6 d1u0ua2 c.95.1.2 (A:238-393) D 43.2 4 0.00029 31.4 1.4 28 264-291 77-104 (156)
7 d1hnja2 c.95.1.2 (A:175-317) K 35.0 2.4 0.00017 31.8 -1.2 25 264-291 78-102 (143)
8 d1vola2 a.74.1.2 (A:208-316) T 32.2 11 0.00082 26.7 2.2 26 262-287 7-32 (109)
9 d1aisb2 a.74.1.2 (B:1206-1300) 28.9 14 0.001 25.3 2.2 29 260-288 4-32 (95)
10 d1ub7a2 c.95.1.2 (A:174-322) K 27.8 3.9 0.00028 30.7 -1.1 25 264-291 81-105 (149)
11 d1u6ea2 c.95.1.2 (A:175-317) K 24.1 3.2 0.00023 31.5 -2.3 79 209-291 12-107 (148)
12 d1r9ja3 c.48.1.1 (A:527-669) T 22.9 22 0.0016 27.1 2.5 35 255-289 97-132 (143)
No 1
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=73.76 E-value=0.7 Score=35.30 Aligned_cols=28 Identities=21% Similarity=0.369 Sum_probs=24.0
Q ss_pred cchhhhccCChHHHHHHHHHHHhhccee
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
+.++++||+.+||+..=-+.+++|||..
T Consensus 77 ~~i~~~Lgl~~~k~~~s~~~l~~~GN~~ 104 (148)
T d1u0ma2 77 DDLSTFLEVDPHAFRFSRATLTEYGNIA 104 (148)
T ss_dssp HHHHHHSCSCGGGGHHHHHHHHHTCBCT
T ss_pred HHHHHHhCCChhhhhHHHHHHHhcCCCC
Confidence 4688999999999977677899999974
No 2
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=60.37 E-value=1.9 Score=33.42 Aligned_cols=28 Identities=32% Similarity=0.509 Sum_probs=24.0
Q ss_pred cchhhhccCChHHHHHHHHHHHhhccee
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
+.+..+||+++||+..=...+.+|||..
T Consensus 76 d~v~~~L~L~~~~~~~s~~vl~~yGN~S 103 (154)
T d1bi5a2 76 DQVEQKLALKPEKMNATREVLSEYGNMS 103 (154)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCG
T ss_pred HHHHHHhCCCHHHHHHhHHHHHhcCCCC
Confidence 4678999999999988778899999963
No 3
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}
Probab=52.72 E-value=2.4 Score=33.05 Aligned_cols=28 Identities=36% Similarity=0.580 Sum_probs=23.6
Q ss_pred cchhhhccCChHHHHHHHHHHHhhccee
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
+.+..|||+++||+..=-..+++|||..
T Consensus 81 d~i~~~L~L~~~~l~~s~~vl~~yGNtS 108 (160)
T d1ee0a2 81 DQVERKLNLKEDKLRASRHVLSEYGNLI 108 (160)
T ss_dssp HHHHHHTTCCTTTTHHHHHHHHHHCBCG
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCCCc
Confidence 4677899999999987667899999964
No 4
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=50.40 E-value=3.1 Score=34.51 Aligned_cols=29 Identities=28% Similarity=0.461 Sum_probs=23.3
Q ss_pred CcchhhhccCChHHHHHHHHHHHhhccee
Q 021943 263 SDDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 263 ~~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
-+.+.++||+++||+..=.+.+++|||..
T Consensus 299 ~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~ 327 (372)
T d1teda_ 299 IEQSVRSLGISAELAAQSWDVLARFGNML 327 (372)
T ss_dssp HHHHHHHHTCCGGGGHHHHHHHHHHCBCT
T ss_pred HHHHHHHcCCCHHHhhhhHHHHhccCCcH
Confidence 34577899999999876557899999973
No 5
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=43.94 E-value=0.99 Score=34.60 Aligned_cols=25 Identities=20% Similarity=0.494 Sum_probs=19.6
Q ss_pred cchhhhccCChHHHHHHHHHHHhhcce
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNL 290 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnL 290 (305)
+.+++|+|+.+||. +...+++|||.
T Consensus 82 ~~v~~~lgi~~ek~--~~~~~~~~GNt 106 (153)
T d1mzja2 82 DVLVDRLGVPEHVV--VSRDAEDTGNT 106 (153)
T ss_dssp HHHHHHHTCCTTSE--ECCTHHHHCBC
T ss_pred HHHHHHhCCCchhc--chhhhhhcCCc
Confidence 35788999999996 33478999995
No 6
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}
Probab=43.23 E-value=4 Score=31.36 Aligned_cols=28 Identities=29% Similarity=0.512 Sum_probs=23.4
Q ss_pred cchhhhccCChHHHHHHHHHHHhhccee
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
+.+..|||+++||+..=-+.+.+|||..
T Consensus 77 d~v~~~L~L~~~k~~~s~~~l~~~GN~s 104 (156)
T d1u0ua2 77 DRVEAKLNLDPTKLIPTRHVMSEYGNMS 104 (156)
T ss_dssp HHHHHHHTCCTTTTHHHHHHHHHHCBCG
T ss_pred HHHHHHhCCCcccchhhHHHHhhcCCCC
Confidence 4677899999999887567799999974
No 7
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=35.04 E-value=2.4 Score=31.84 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=19.9
Q ss_pred cchhhhccCChHHHHHHHHHHHhhccee
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
+.+++++|+.+||+- ..+++|||..
T Consensus 78 ~~~~~~l~l~~~k~~---~~~~~~GN~~ 102 (143)
T d1hnja2 78 SATAKKLGMSMDNVV---VTLDRHGNTS 102 (143)
T ss_dssp HHHHHHTTCCGGGBC---CCHHHHCBCG
T ss_pred HHHHHhCccchhhhh---hhhhhhcccc
Confidence 467899999998764 5689999973
No 8
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.17 E-value=11 Score=26.67 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=20.6
Q ss_pred CCcchhhhccCChHHHHHHHHHHHhh
Q 021943 262 ASDDVCSKLGISKEKALSITQSVQKY 287 (305)
Q Consensus 262 a~~r~~SKlgis~EK~~kI~~~vqKY 287 (305)
+=.|+||+||++++-.+.-.++|++-
T Consensus 7 ~i~Rf~s~L~L~~~i~~~A~~i~~~~ 32 (109)
T d1vola2 7 FMSRFCSNLCLPKQVQMAATHIARKA 32 (109)
T ss_dssp THHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcCHHHHHHHHHHHHHH
Confidence 34689999999998877777777763
No 9
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=28.90 E-value=14 Score=25.34 Aligned_cols=29 Identities=10% Similarity=0.150 Sum_probs=21.3
Q ss_pred cCCCcchhhhccCChHHHHHHHHHHHhhc
Q 021943 260 SGASDDVCSKLGISKEKALSITQSVQKYG 288 (305)
Q Consensus 260 sga~~r~~SKlgis~EK~~kI~~~vqKYG 288 (305)
..+=.|+|++||++++-.+.-.+.|++--
T Consensus 4 ~d~I~R~~~~L~L~~~i~~~A~~i~~~~~ 32 (95)
T d1aisb2 4 TDYVNKFADELGLSEKVRRRAIEILDEAY 32 (95)
T ss_dssp GGGHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHHHH
Confidence 33446899999999987777777776643
No 10
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=27.78 E-value=3.9 Score=30.71 Aligned_cols=25 Identities=32% Similarity=0.563 Sum_probs=19.9
Q ss_pred cchhhhccCChHHHHHHHHHHHhhccee
Q 021943 264 DDVCSKLGISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 264 ~r~~SKlgis~EK~~kI~~~vqKYGnLt 291 (305)
+.+++++|+.+||.- ..+++|||..
T Consensus 81 ~~i~~~lgi~~~k~~---~~~~~~Gn~~ 105 (149)
T d1ub7a2 81 DAARERLGLPWERVA---VNVDRYGNTS 105 (149)
T ss_dssp HHHHHTTTCCGGGBC---CCHHHHCBCG
T ss_pred HHHHhhccchhhHHH---HHHHHhcCCc
Confidence 467889999998764 5689999974
No 11
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.06 E-value=3.2 Score=31.45 Aligned_cols=79 Identities=15% Similarity=0.212 Sum_probs=43.6
Q ss_pred HHhhhcCCcchhhhhcccCCcchhhHHHHHHHHHhhhcchhhhhhhhhhcccCCC-----------------cchhhhcc
Q 021943 209 ARLLTLDGTWQSFAESFSRNAPYIVSTVLWVYWGVCISDMIPFYLGKLFTKSGAS-----------------DDVCSKLG 271 (305)
Q Consensus 209 sr~l~ldgtwqs~~~sfs~~~~y~is~~lwvywG~~isdmIpFYiGKL~~qsga~-----------------~r~~SKlg 271 (305)
+..+..++.|-.+++.-....+|+---=--||= .-..-+|=.+-+++.+.+.+ +.+++|||
T Consensus 12 ~~~i~~~~~~~~~~~~~~~~~~~~~m~G~~Vf~--~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lg 89 (148)
T d1u6ea2 12 ADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFR--WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQ 89 (148)
T ss_dssp GGGEEESSCHHHHHTSTTSCCCCEEECHHHHHH--HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHT
T ss_pred CCeeEeCCCCcccccCCCCCCccEEeecHHHHH--HHHHHHHHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcC
Confidence 345567788888887766665553211001110 00112233344455544433 45789999
Q ss_pred CChHHHHHHHHHHHhhccee
Q 021943 272 ISKEKALSITQSVQKYGNLI 291 (305)
Q Consensus 272 is~EK~~kI~~~vqKYGnLt 291 (305)
+++||.- ...+++|||..
T Consensus 90 l~~ek~~--~~~~~~~GNt~ 107 (148)
T d1u6ea2 90 LRPDAVV--ANDIEHTGNTS 107 (148)
T ss_dssp CCTTCEE--CCTHHHHCBCG
T ss_pred CCchhhh--hhhHHhhCCCc
Confidence 9998743 23678999964
No 12
>d1r9ja3 c.48.1.1 (A:527-669) Transketolase (TK), C-domain {Leishmania mexicana mexicana [TaxId: 44270]}
Probab=22.87 E-value=22 Score=27.08 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=30.4
Q ss_pred hhhcccCCCcchhhhccCChHHHH-HHHHHHHhhcc
Q 021943 255 KLFTKSGASDDVCSKLGISKEKAL-SITQSVQKYGN 289 (305)
Q Consensus 255 KL~~qsga~~r~~SKlgis~EK~~-kI~~~vqKYGn 289 (305)
..||.++-.++.+.+.|++.|.+. ++....+||..
T Consensus 97 d~FG~Sg~~~~L~~~fGlt~e~Iv~~~~~ll~k~~~ 132 (143)
T d1r9ja3 97 SGFGASAPAGVLYKKFGITVEEVVRTGRELAKRFPD 132 (143)
T ss_dssp SSCCCSSCHHHHHHHTTCSHHHHHHHHHHHHHHSCT
T ss_pred CCccccCCHHHHHHHcCCCHHHHHHHHHHHHHHcCC
Confidence 569999999999999999999874 67788888765
Done!