Your job contains 1 sequence.
>021945
MASNSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF
IEEEEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHT
YKHELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMV
IPKQQAEKHFALSSEIASKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKG
VKAGDTVSFWRSNVGSNSKLFIDCKLQQNGNGSGFEEMQSQVPNIGVVRLFGVNILEDPN
NLCCR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021945
(305 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 797 2.6e-79 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 794 5.4e-79 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 770 1.9e-76 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 747 5.1e-74 1
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 429 2.6e-40 1
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 409 3.4e-38 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 356 1.4e-32 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 321 2.6e-32 2
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 346 1.6e-31 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 322 2.3e-31 2
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 334 3.0e-30 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 308 8.6e-30 2
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 317 1.9e-28 1
TAIR|locus:2170101 - symbol:ERF110 "ethylene response fa... 170 1.6e-12 1
TAIR|locus:2087065 - symbol:ERF4 "ethylene responsive ele... 169 2.0e-12 1
TAIR|locus:2018635 - symbol:RAP2.6 "related to AP2 6" spe... 164 7.6e-12 1
TAIR|locus:2194007 - symbol:ERF73 "ethylene response fact... 171 3.7e-11 1
TAIR|locus:2154272 - symbol:CRF3 "AT5G53290" species:3702... 170 1.9e-10 1
TAIR|locus:2061956 - symbol:ERF71 "ethylene response fact... 151 2.2e-10 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 174 2.7e-10 1
TAIR|locus:2148022 - symbol:SHN2 "shine2" species:3702 "A... 149 3.7e-10 1
TAIR|locus:2167659 - symbol:ERF9 "erf domain protein 9" s... 149 3.7e-10 1
TAIR|locus:2176511 - symbol:AT5G43410 species:3702 "Arabi... 148 4.8e-10 1
TAIR|locus:2132962 - symbol:CRF4 "AT4G27950" species:3702... 166 4.9e-10 1
TAIR|locus:2032500 - symbol:ERF11 "ERF domain protein 11"... 147 6.1e-10 1
TAIR|locus:2086203 - symbol:ESE1 "ethylene and salt induc... 145 1.0e-09 1
TAIR|locus:2024249 - symbol:ERF10 "ERF domain protein 10"... 158 1.1e-09 1
TAIR|locus:2076720 - symbol:CRF6 "AT3G61630" species:3702... 162 1.2e-09 1
TAIR|locus:2074765 - symbol:CEJ1 "cooperatively regulated... 123 1.3e-09 2
TAIR|locus:2009655 - symbol:ERF8 "ethylene response facto... 143 1.7e-09 1
TAIR|locus:2018289 - symbol:ERF14 "Ethylene-responsive el... 141 2.9e-09 1
TAIR|locus:2198978 - symbol:AT1G80580 species:3702 "Arabi... 154 4.8e-09 1
TAIR|locus:2176095 - symbol:ABR1 "ABA REPRESSOR1" species... 159 4.9e-09 1
TAIR|locus:2128429 - symbol:CRF2 "AT4G23750" species:3702... 155 1.0e-08 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 160 1.2e-08 1
TAIR|locus:2086223 - symbol:ERF1 "ethylene response facto... 146 1.6e-08 1
TAIR|locus:2086213 - symbol:TDR1 "Transcriptional Regulat... 134 1.7e-08 1
TAIR|locus:2183174 - symbol:RAP2.11 "related to AP2 11" s... 149 1.9e-08 1
TAIR|locus:2197076 - symbol:RAP2.12 "related to AP2 12" s... 153 2.0e-08 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 153 2.0e-08 1
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 157 2.4e-08 1
TAIR|locus:2136078 - symbol:CRF1 "AT4G11140" species:3702... 146 3.3e-08 2
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 156 3.4e-08 1
TAIR|locus:2183861 - symbol:Rap2.6L "related to AP2 6l" s... 142 4.2e-08 1
UNIPROTKB|Q5MFV2 - symbol:BIERF2 "BTH-induced ERF transcr... 144 5.2e-08 1
TAIR|locus:2090975 - symbol:RAP2.2 "related to AP2 2" spe... 149 6.6e-08 1
TAIR|locus:2176187 - symbol:AT5G51190 species:3702 "Arabi... 140 1.2e-07 1
TAIR|locus:2156171 - symbol:AT5G61890 species:3702 "Arabi... 142 1.2e-07 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 146 1.3e-07 1
TAIR|locus:505006142 - symbol:CRF7 "AT1G22985" species:37... 126 1.3e-07 1
TAIR|locus:2038500 - symbol:ORA59 "octadecanoid-responsiv... 141 1.5e-07 1
TAIR|locus:2026301 - symbol:CRF8 "AT1G71130" species:3702... 125 1.7e-07 1
TAIR|locus:2008021 - symbol:ERF3 "ethylene responsive ele... 139 1.7e-07 1
TAIR|locus:2062954 - symbol:CRF5 "AT2G46310" species:3702... 143 1.7e-07 1
TAIR|locus:2032510 - symbol:ERF12 "ERF domain protein 12"... 133 1.8e-07 1
TAIR|locus:2195985 - symbol:AT1G77200 species:3702 "Arabi... 140 2.0e-07 1
TAIR|locus:2183304 - symbol:AT5G07310 species:3702 "Arabi... 141 2.0e-07 1
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 143 2.1e-07 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 145 2.4e-07 1
TAIR|locus:2058641 - symbol:DEAR3 "DREB and EAR motif pro... 127 3.1e-07 1
TAIR|locus:2158118 - symbol:AT5G67000 species:3702 "Arabi... 130 3.3e-07 1
TAIR|locus:2092339 - symbol:ERF7 "ethylene response facto... 138 3.4e-07 1
TAIR|locus:2151576 - symbol:AT5G61590 species:3702 "Arabi... 133 4.4e-07 1
UNIPROTKB|Q5MFV3 - symbol:BIERF1 "BTH-induced ERF transcr... 142 4.6e-07 1
TAIR|locus:2201103 - symbol:DREB26 "dehydration response ... 136 4.6e-07 1
TAIR|locus:2116224 - symbol:RRTF1 "redox responsive trans... 138 4.9e-07 1
TAIR|locus:2089368 - symbol:EBP "ethylene-responsive elem... 137 5.0e-07 1
TAIR|locus:2005493 - symbol:AP2 "APETALA 2" species:3702 ... 142 5.3e-07 1
TAIR|locus:2010346 - symbol:AT1G12890 species:3702 "Arabi... 134 6.4e-07 1
UNIPROTKB|Q8VXC3 - symbol:ebp-89 "Ethylene responsive pro... 139 6.6e-07 1
UNIPROTKB|Q5MFV0 - symbol:BIERF4 "BTH-induced ERF transcr... 138 8.7e-07 1
TAIR|locus:2024076 - symbol:DRNL "DORNROSCHEN-like" speci... 128 8.8e-07 2
TAIR|locus:2124504 - symbol:AT4G18450 species:3702 "Arabi... 137 9.4e-07 1
TAIR|locus:1005716457 - symbol:RAP2.9 "related to AP2 9" ... 118 1.0e-06 1
TAIR|locus:2145477 - symbol:SHN3 "shine3" species:3702 "A... 128 1.2e-06 1
TAIR|locus:2200477 - symbol:ADAP "ARIA-interacting double... 137 1.3e-06 1
TAIR|locus:2131854 - symbol:CBF1 "C-repeat/DRE binding fa... 131 1.3e-06 1
TAIR|locus:2017829 - symbol:WRI4 "WRINKLED 4" species:370... 136 1.3e-06 1
TAIR|locus:2155598 - symbol:TOE3 "target of early activat... 137 1.3e-06 1
TAIR|locus:2042496 - symbol:ERF15 "ethylene-responsive el... 133 1.4e-06 1
TAIR|locus:2008216 - symbol:PLT2 "PLETHORA 2" species:370... 140 1.4e-06 1
TAIR|locus:2038927 - symbol:AT2G20350 species:3702 "Arabi... 116 1.7e-06 1
TAIR|locus:2091891 - symbol:PLT1 "PLETHORA 1" species:370... 139 1.8e-06 1
TAIR|locus:2129116 - symbol:ERF-1 "ethylene responsive el... 133 1.9e-06 1
TAIR|locus:2145249 - symbol:tny "TINY" species:3702 "Arab... 130 1.9e-06 1
TAIR|locus:2037698 - symbol:SHN1 "SHINE 1" species:3702 "... 128 2.0e-06 1
TAIR|locus:2825329 - symbol:AT1G71450 species:3702 "Arabi... 125 2.2e-06 1
TAIR|locus:2173113 - symbol:CBF4 "C-repeat-binding factor... 130 2.2e-06 1
TAIR|locus:2131849 - symbol:DREB1A "dehydration response ... 129 2.5e-06 1
TAIR|locus:2171529 - symbol:ERF5 "ethylene responsive ele... 133 2.6e-06 1
TAIR|locus:2173009 - symbol:AIL5 "AINTEGUMENTA-like 5" sp... 137 3.0e-06 1
TAIR|locus:2030265 - symbol:AT1G72570 species:3702 "Arabi... 135 3.1e-06 1
TAIR|locus:2171514 - symbol:ERF2 "ethylene responsive ele... 130 3.1e-06 1
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 133 3.2e-06 2
TAIR|locus:2056048 - symbol:SNZ "SCHNARCHZAPFEN" species:... 133 3.2e-06 1
TAIR|locus:2155680 - symbol:AIL7 "AINTEGUMENTA-like 7" sp... 136 3.2e-06 1
TAIR|locus:2825842 - symbol:RAP2.1 "related to AP2 1" spe... 113 3.5e-06 1
TAIR|locus:2204730 - symbol:AT1G77640 species:3702 "Arabi... 129 4.2e-06 1
TAIR|locus:2131834 - symbol:CBF2 "C-repeat/DRE binding fa... 127 4.4e-06 1
TAIR|locus:2171840 - symbol:AT5G65130 species:3702 "Arabi... 130 4.7e-06 1
WARNING: Descriptions of 60 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 178/295 (60%), Positives = 212/295 (71%)
Query: 4 NSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEE 63
+ SSV LD SENG++AES+KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF EE
Sbjct: 38 SGSSVVLD-----SENGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 92
Query: 64 EEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKH 123
+EAAR YD A RFR ++A+TNF+ +DE D FL+SHSK+EIVDMLRKHTY
Sbjct: 93 DEAARAYDVAVHRFRRRDAVTNFKDVKMDEDEVD-----FLNSHSKSEIVDMLRKHTYNE 147
Query: 124 ELEQSKQNYACVG-ISCYNNSSGFS-DLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVI 181
ELEQSK+ G ++ +SG S D + F+ E LFEK +TPSDVGKLNR+VI
Sbjct: 148 ELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGFRSA--EALFEKAVTPSDVGKLNRLVI 205
Query: 182 PKQQAEKHFAL-SSEIASKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKG 240
PK AEKHF L SS ++ KG+LLNFED KVWR RY YW+SSQSYVLTKGWSRFVKEK
Sbjct: 206 PKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 265
Query: 241 VKAGDTVSFWRSNVGSNSKLFIDCKLQQNGNGSGFEEMQSQVPNIGVVRLFGVNI 295
++AGD VSF RSN G + +L+I K + +GS + + V+RLFGVNI
Sbjct: 266 LRAGDVVSFSRSN-GQDQQLYIGWKSR---SGSDLDAGR-------VLRLFGVNI 309
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 174/297 (58%), Positives = 203/297 (68%)
Query: 1 MASNSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 60
M S SSV LD ENG++ ES+KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 38 MGSGGSSVVLD-----PENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 92
Query: 61 IEEEEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHT 120
E+EEAAR YD AA RFRG++A+ NF+ LE D FL +HSKAEIVDMLRKHT
Sbjct: 93 NEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGD------LAFLEAHSKAEIVDMLRKHT 146
Query: 121 YKHELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMV 180
Y ELEQ+ + + + +G S + E LFEK +TPSDVGKLNR+V
Sbjct: 147 YADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTR--EVLFEKAVTPSDVGKLNRLV 204
Query: 181 IPKQQAEKHFALSSE--IASKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKE 238
IPKQ AEKHF L S +KG+L+NFED KVWR RY YW+SSQSYVLTKGWSRFVKE
Sbjct: 205 IPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKE 264
Query: 239 KGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGNGSGFEEMQSQVPNIGVVRLFGVNI 295
K ++AGD V+F RS G +L+ID K++ SG E QV VVRLFGV+I
Sbjct: 265 KNLRAGDVVTFERST-GLERQLYIDWKVR-----SGPRENPVQV----VVRLFGVDI 311
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 173/315 (54%), Positives = 213/315 (67%)
Query: 1 MASNSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 60
M S SSV LD SENG++ ES+KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 45 MGSGGSSVVLD-----SENGVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 99
Query: 61 IEEEEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHT 120
EEEEAA YD A RFRG++A+TNF++ ++ +D E FL +HSKAEIVDMLRKHT
Sbjct: 100 NEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGNDA----ESAFLDAHSKAEIVDMLRKHT 155
Query: 121 YKHELEQSKQNYACVGISCYNNSSGFSDL-FGSNCFQETPVEFLFEKVLTPSDVGKLNRM 179
Y E EQS++ + ++ SG +G++ E LFEK +TPSDVGKLNR+
Sbjct: 156 YADEFEQSRRKF----VNGDGKRSGLETATYGNDAVLRAR-EVLFEKTVTPSDVGKLNRL 210
Query: 180 VIPKQQAEKHF---ALSSEIA-----SKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKG 231
VIPKQ AEKHF A+++ + +KG+L+N ED T KVWR RY YW+SSQSYVLTKG
Sbjct: 211 VIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKG 270
Query: 232 WSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGNGSGFEEMQSQVPNIGVVRLF 291
WSRFVKEK ++AGD V F RS G + +L+I K++ + P VVRLF
Sbjct: 271 WSRFVKEKNLRAGDVVCFERST-GPDRQLYIHWKVRSS-------------PVQTVVRLF 316
Query: 292 GVNIL----EDPNNL 302
GVNI E PN++
Sbjct: 317 GVNIFNVSNEKPNDV 331
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 157/265 (59%), Positives = 196/265 (73%)
Query: 4 NSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEE 63
+ +SV LD ++ + E ++AES+KLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTF EE
Sbjct: 34 SGTSVVLDSENGV-EVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE 92
Query: 64 EEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKH 123
+EAAR YD AA RFRG++A+TNF+ +T E++ +E FL++HSK+EIVDMLRKHTYK
Sbjct: 93 DEAARAYDVAAHRFRGRDAVTNFK---DTTFEEE-VE--FLNAHSKSEIVDMLRKHTYKE 146
Query: 124 ELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPK 183
EL+Q K+N G + + + F+ E LFEK +TPSDVGKLNR+VIPK
Sbjct: 147 ELDQRKRNRD--GNGKETTAFALASMVVMTGFKTA--ELLFEKTVTPSDVGKLNRLVIPK 202
Query: 184 QQAEKHFAL---SSEIASKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKG 240
QAEKHF L ++ ++ KG+LLNFED KVWR RY YW+SSQSYVLTKGWSRFVKEK
Sbjct: 203 HQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKR 262
Query: 241 VKAGDTVSFWRSNVGSNSKLFIDCK 265
+ AGD +SF RSN + K FI K
Sbjct: 263 LCAGDLISFKRSN-DQDQKFFIGWK 286
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 130/292 (44%), Positives = 171/292 (58%)
Query: 17 SENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVY------ 70
SENG++ E + S K P+ R+ + + + R W G I E+ RV+
Sbjct: 42 SENGVEVEVEA-ESRKL------PSSRFKGVVPQPNGR-W-GAQIYEKHQ-RVWLGTFNE 91
Query: 71 -DTAALRFRGQNAITNFR-TSLETDDEDD-YMEKI-FLSSHSKAEIVDMLRKHTYKHELE 126
D AA + A FR T+ +D + E++ FL++HSK+EIVDMLRKHTYK EL+
Sbjct: 92 EDEAARAY--DVAAHRFRGRDAVTNFKDTTFEEEVEFLNAHSKSEIVDMLRKHTYKEELD 149
Query: 127 QSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQA 186
Q K+N G + + + F+ E LFEK +TPSDVGKLNR+VIPK QA
Sbjct: 150 QRKRNRD--GNGKETTAFALASMVVMTGFKTA--ELLFEKTVTPSDVGKLNRLVIPKHQA 205
Query: 187 EKHFAL---SSEIASKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKA 243
EKHF L ++ ++ KG+LLNFED KVWR RY YW+SSQSYVLTKGWSRFVKEK + A
Sbjct: 206 EKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCA 265
Query: 244 GDTVSFWRSNVGSNSKLFIDCKLQQNGNGSGFEEMQSQVPNIGVVRLFGVNI 295
GD +SF RSN + K FI K + SG + +V +RLFGV+I
Sbjct: 266 GDLISFKRSN-DQDQKFFIGWKSK-----SGLDLETGRV-----MRLFGVDI 306
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 99/245 (40%), Positives = 142/245 (57%)
Query: 32 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRG--QNAITNFRTS 89
KYKGVV Q NG WGAQIY H+R+WLGTF +EAA YD+A+++ R N+ NF S
Sbjct: 27 KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDANSHRNFPWS 86
Query: 90 LETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHE----LEQSKQNYACVGISCYNNSSG 145
T +E D F + ++ +++M+R +Y+H+ L Q A + I + G
Sbjct: 87 TITLNEPD-----FQNCYTTETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQARG 141
Query: 146 FSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFA-LSSEIASK--GLL 202
+ CF T LF+K LTPSDVGKLNR+VIPK+ A K+ +S++ + K G +
Sbjct: 142 EVNQESDKCFSCTQ---LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEI 198
Query: 203 LN--------FEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNV 254
+ F D + W+ RYCYW SSQS+V T+GW+ FVKEK +K D ++F+ +V
Sbjct: 199 VGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDV 258
Query: 255 GSNSK 259
+N K
Sbjct: 259 PNNVK 263
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 99/246 (40%), Positives = 139/246 (56%)
Query: 30 SSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRG--QNAITNFR 87
++K+KGVV Q NG WGAQIY H+R+WLGTF EAA YD+A+++ R N+ NF
Sbjct: 44 TTKFKGVVQQQNGHWGAQIYADHRRIWLGTFKSAHEAAAAYDSASIKLRSFDANSHRNFP 103
Query: 88 TSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHE----LEQSKQNYACVGI--SCYN 141
S T E D+ E ++ +++M+R +Y+H+ L Q A + I S
Sbjct: 104 WSDFTLHEPDFQE-----CYTTEAVLNMIRDGSYQHKFRDFLRIRSQIVANINIVGSKQV 158
Query: 142 NSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFAL-----SSEI 196
G + CF T LF+K LTPSDVGKLNR+VIPK+ A K+ S +
Sbjct: 159 LGGGEGGQESNKCFSCTQ---LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKE 215
Query: 197 ASKGLL---LNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSN 253
S+G+ + F D + W+ RYCYW SSQS+V T+GW+ FVKEK +K D + F+ +
Sbjct: 216 TSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCD 275
Query: 254 VGSNSK 259
V +N K
Sbjct: 276 VPNNVK 281
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 70/105 (66%), Positives = 82/105 (78%)
Query: 161 EFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQKVWRLRYCYW 220
E +F+KV+TPSDVGKLNR+VIPKQ AE+ F L S KGLLLNFED T K WR RY YW
Sbjct: 32 EHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 221 SSSQSYVLTKGWSRFVKEKGVKAGDTVSFWR--SNVGSNSKLFID 263
+SSQSYV+TKGWSRFVK+K + AGD VSF R + G +S+LFID
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFID 136
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 321 (118.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 69/125 (55%), Positives = 84/125 (67%)
Query: 161 EFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIAS---KGLLLNFEDSTQKVWRLRY 217
E LFEK LTPSDVGKLNR+VIPKQ AE++F L++ A KGLLL FED K WR RY
Sbjct: 35 EALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRY 94
Query: 218 CYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGNGSG--F 275
YW+SSQSYVLTKGWSR+VKEK + AGD V F R + FI + + + + S +
Sbjct: 95 SYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHR-SDGGRFFIGWRRRGDSSSSSDSY 153
Query: 276 EEMQS 280
+QS
Sbjct: 154 RHVQS 158
Score = 48 (22.0 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 273 SGFEEMQSQVPNIGVVRLFGVNI 295
+G + ++SQ N +RLFGVN+
Sbjct: 168 AGAQAVESQRGNSKTLRLFGVNM 190
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/142 (50%), Positives = 93/142 (65%)
Query: 124 ELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPK 183
E ++ ++ + +G S + SG ++ E +F+KV+TPSDVGKLNR+VIPK
Sbjct: 16 EQDRDQELTSNIGASSSSGPSGNNNNLPMMMIPPPEKEHMFDKVVTPSDVGKLNRLVIPK 75
Query: 184 QQAEKHFALSSEIASKGLLLNFEDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKA 243
Q AE++F L S G LLNF+D K+WR RY YW+SSQSYV+TKGWSRFVKEK + A
Sbjct: 76 QHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDA 135
Query: 244 GDTVSFWRS--NVGSNSKLFID 263
GD VSF R + SKL+ID
Sbjct: 136 GDIVSFQRGIGDESERSKLYID 157
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 322 (118.4 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 71/132 (53%), Positives = 86/132 (65%)
Query: 161 EFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIAS----------KGLLLNFEDSTQ 210
E LFEK LTPSDVGKLNR+VIPKQ AEK+F L++ + S KG+LL+FED +
Sbjct: 43 ESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESG 102
Query: 211 KVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNG 270
K WR RY YW+SSQSYVLTKGWSRFVK+K + GD V F R S +LFI + + G
Sbjct: 103 KSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSR-RLFIGWRRRGQG 161
Query: 271 NGSGFEEMQSQV 282
+ S S V
Sbjct: 162 SSSSVAATNSAV 173
Score = 38 (18.4 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 280 SQVPNIGVVRLFGVNI 295
S V + VRLFGVN+
Sbjct: 221 SVVGSSRTVRLFGVNL 236
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 65/106 (61%), Positives = 82/106 (77%)
Query: 161 EFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEI---ASKGLLLNFEDSTQKVWRLRY 217
E +F+KV+TPSDVGKLNR+VIPKQ AE++F L + ++KGLLLNFED + WR RY
Sbjct: 20 EHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79
Query: 218 CYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFID 263
YW+SSQSYV+TKGWSRFVK+K + AGD VSF R + + KL+ID
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKD-KLYID 124
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 308 (113.5 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 68/132 (51%), Positives = 89/132 (67%)
Query: 161 EFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSS---------EIAS--KGLLLNFEDST 209
E LFEK LTPSDVGKLNR+VIPKQ AEK+F L++ ++A+ KG+LL+FED +
Sbjct: 26 ESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDES 85
Query: 210 QKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQN 269
K W+ RY YW+SSQSYVLTKGWSR+VK+K + AGD V F R + +LFI + +
Sbjct: 86 GKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLH-RLFIGWRRRGE 144
Query: 270 GNGSGFEEMQSQ 281
+ S + SQ
Sbjct: 145 ASSSPAVSVVSQ 156
Score = 37 (18.1 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 288 VRLFGVNI 295
VRLFGVN+
Sbjct: 213 VRLFGVNL 220
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 60/94 (63%), Positives = 72/94 (76%)
Query: 161 EFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQKVWRLRYCYW 220
E +F+KVLTPSDVGKLNR+VIPKQ AE F L G +L+F+D K+WR RY YW
Sbjct: 33 EHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDN--QNGTVLDFQDKNGKMWRFRYSYW 90
Query: 221 SSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNV 254
+SSQSYV+TKGWSRFVKEK + AGDTVSF+R +
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYI 124
>TAIR|locus:2170101 [details] [associations]
symbol:ERF110 "ethylene response factor 110"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026650
EMBL:AJ580378 IPI:IPI00543457 RefSeq:NP_199819.3 UniGene:At.29751
ProteinModelPortal:Q70II3 SMR:Q70II3 STRING:Q70II3
EnsemblPlants:AT5G50080.1 GeneID:835072 KEGG:ath:AT5G50080
TAIR:At5g50080 eggNOG:NOG295694 HOGENOM:HOG000210042
InParanoid:Q70II3 OMA:EDLINYW PhylomeDB:Q70II3
ProtClustDB:CLSN2920550 Genevestigator:Q70II3 Uniprot:Q70II3
Length = 220
Score = 170 (64.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 39/87 (44%), Positives = 49/87 (56%)
Query: 5 SSSVDLDHDHNLSENGIDA---ESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGT 59
SS +D HN E + E + +Y+GV +P G+W A+I + H+ RVWLGT
Sbjct: 46 SSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGT 105
Query: 60 FIEEEEAARVYDTAALRFRGQNAITNF 86
F E AAR YD AALRFRG A NF
Sbjct: 106 FDTAEAAARAYDEAALRFRGNKAKLNF 132
>TAIR|locus:2087065 [details] [associations]
symbol:ERF4 "ethylene responsive element binding factor
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0009864 "induced systemic resistance, jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 GO:GO:0010105
GO:GO:0016604 HOGENOM:HOG000237624 GO:GO:0009864 EMBL:AF003098
EMBL:AB008106 EMBL:AP000413 EMBL:AY140030 EMBL:BT010325
EMBL:AY086232 IPI:IPI00539614 PIR:T52019 RefSeq:NP_188139.1
UniGene:At.47551 ProteinModelPortal:O80340 SMR:O80340 IntAct:O80340
STRING:O80340 EnsemblPlants:AT3G15210.1 GeneID:820752
KEGG:ath:AT3G15210 TAIR:At3g15210 eggNOG:NOG298559
InParanoid:O80340 OMA:DCASPPT PhylomeDB:O80340
ProtClustDB:CLSN2679790 Genevestigator:O80340 GermOnline:AT3G15210
Uniprot:O80340
Length = 222
Score = 169 (64.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 41/85 (48%), Positives = 52/85 (61%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
+Y+GV +P GR+ A+I + K RVWLGTF EEAAR YDTAA FRG A TNF T
Sbjct: 24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTF 83
Query: 90 LETDDEDDYMEKIFLSSHSKAEIVD 114
LE D+ + F S S++ +D
Sbjct: 84 LELSDQK--VPTGFARSPSQSSTLD 106
>TAIR|locus:2018635 [details] [associations]
symbol:RAP2.6 "related to AP2 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP;RCA] [GO:0034605 "cellular response to heat"
evidence=IEP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0034605 GO:GO:0009753 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009658 GO:GO:0009751 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC005687
EMBL:AY062847 EMBL:AY114582 EMBL:AF003099 IPI:IPI00532143
PIR:D96498 RefSeq:NP_175008.1 UniGene:At.10778
ProteinModelPortal:Q7G1L2 SMR:Q7G1L2 EnsemblPlants:AT1G43160.1
GeneID:840915 KEGG:ath:AT1G43160 TAIR:At1g43160 InParanoid:Q7G1L2
PhylomeDB:Q7G1L2 Genevestigator:Q7G1L2 Uniprot:Q7G1L2
Length = 192
Score = 164 (62.8 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 34/63 (53%), Positives = 42/63 (66%)
Query: 32 KYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
KY+GV +P G+W A+I + H+ RVWLGTF E AAR YD AALRFRG A NF +
Sbjct: 60 KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119
Query: 90 LET 92
+ T
Sbjct: 120 VGT 122
>TAIR|locus:2194007 [details] [associations]
symbol:ERF73 "ethylene response factor 73" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;IDA] [GO:0034059 "response to
anoxia" evidence=IGI] [GO:0009873 "ethylene mediated signaling
pathway" evidence=IMP;TAS] [GO:0071369 "cellular response to
ethylene stimulus" evidence=IMP] [GO:0071456 "cellular response to
hypoxia" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0034059 UniGene:At.35111 IPI:IPI00541631
RefSeq:NP_001077812.1 UniGene:At.68119 ProteinModelPortal:F4IDA7
SMR:F4IDA7 EnsemblPlants:AT1G72360.2 GeneID:843568
KEGG:ath:AT1G72360 OMA:KKHEPND Uniprot:F4IDA7
Length = 262
Score = 171 (65.3 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 39/77 (50%), Positives = 47/77 (61%)
Query: 12 HDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARV 69
H H+ S G ++ KK SS+YKG+ +P GRW A+I + K RVWLGTF EEAAR
Sbjct: 57 HKHHAS--GSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARA 114
Query: 70 YDTAALRFRGQNAITNF 86
YD A R RG A NF
Sbjct: 115 YDLEAKRIRGAKAKLNF 131
>TAIR|locus:2154272 [details] [associations]
symbol:CRF3 "AT5G53290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 EMBL:AB013388 GO:GO:0048825 GO:GO:0042991
HOGENOM:HOG000237664 EMBL:AY560878 EMBL:BT020244 EMBL:BT021136
IPI:IPI00543130 RefSeq:NP_200141.1 UniGene:At.49792
ProteinModelPortal:Q9FK12 SMR:Q9FK12 IntAct:Q9FK12 PRIDE:Q9FK12
EnsemblPlants:AT5G53290.1 GeneID:835410 KEGG:ath:AT5G53290
TAIR:At5g53290 eggNOG:NOG331684 InParanoid:Q9FK12 OMA:NEITVEP
PhylomeDB:Q9FK12 ProtClustDB:CLSN2686526 Genevestigator:Q9FK12
Uniprot:Q9FK12
Length = 354
Score = 170 (64.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 32 KYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
K++GV +P G+W A+I E+ +R+WLGTF EEAA VYD AA+R RG +A+TNF
Sbjct: 124 KFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIP 183
Query: 90 LETDDEDDYMEKI 102
+ ++E++ E +
Sbjct: 184 PQEEEEEEEPEPV 196
>TAIR|locus:2061956 [details] [associations]
symbol:ERF71 "ethylene response factor 71" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0034059 "response to anoxia"
evidence=IGI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC002535 GO:GO:0034059 HOGENOM:HOG000237624
EMBL:AY074645 IPI:IPI00523940 PIR:T00432 RefSeq:NP_182274.1
UniGene:At.37019 ProteinModelPortal:O22259 SMR:O22259
EnsemblPlants:AT2G47520.1 GeneID:819365 KEGG:ath:AT2G47520
TAIR:At2g47520 eggNOG:NOG247457 InParanoid:O22259 OMA:MALEDYM
PhylomeDB:O22259 ProtClustDB:CLSN2913160 Genevestigator:O22259
Uniprot:O22259
Length = 171
Score = 151 (58.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 22 DAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRG 79
+ + K+ + Y+G+ +P G+W A+I + K RVWLGTF +EAAR YD AA++ RG
Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRG 98
Query: 80 QNAITNFRTSLETDDEDD 97
+ A NF + + ++E D
Sbjct: 99 RKAKLNFPNT-QVEEEAD 115
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 174 (66.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 43/114 (37%), Positives = 65/114 (57%)
Query: 157 ETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFED-STQKVWRL 215
E + FL +KVL SDVG L R+V+PK++AE H L A G+ L ED T +VW +
Sbjct: 565 EKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETH--LPELEARDGISLAMEDIGTSRVWNM 622
Query: 216 RYCYWSSSQSYV-LTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQ 268
RY +W +++S + L + FVK G++ GD + + S+V L K++Q
Sbjct: 623 RYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIY-SDVKCGKYLIRGVKVRQ 675
>TAIR|locus:2148022 [details] [associations]
symbol:SHN2 "shine2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL360314 HOGENOM:HOG000237624
EMBL:AY560865 IPI:IPI00534793 RefSeq:NP_196680.1 UniGene:At.70314
ProteinModelPortal:Q9LFN7 SMR:Q9LFN7 PRIDE:Q9LFN7
EnsemblPlants:AT5G11190.1 GeneID:830989 KEGG:ath:AT5G11190
TAIR:At5g11190 eggNOG:NOG292617 InParanoid:Q9LFN7 OMA:DQLAMEM
PhylomeDB:Q9LFN7 ProtClustDB:CLSN2692546 Genevestigator:Q9LFN7
Uniprot:Q9LFN7
Length = 189
Score = 149 (57.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/176 (28%), Positives = 88/176 (50%)
Query: 30 SSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
S K++GV + G W ++I +RVWLGTF E AAR YD AAL GQNA TNF
Sbjct: 4 SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFP 63
Query: 88 TSLETDDEDDYMEKI---FLSSHSKAEIVDMLRKHTYKHELEQSKQNYACVGISCYNNSS 144
+++++ D+++ + +S S +E+++ + + K +L S C+ + ++
Sbjct: 64 V-VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCK-DLTPS---LTCLRLDTDSSHI 118
Query: 145 G-FSDLFGSNCFQETPVEFLFEKVLTPS--DVG--KLNRMVIPKQQAEKHFALSSE 195
G + GS + V+ S D+G +N+ + K++ E+ +S E
Sbjct: 119 GVWQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDE 174
>TAIR|locus:2167659 [details] [associations]
symbol:ERF9 "erf domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
[GO:0006857 "oligopeptide transport" evidence=RCA] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB005239 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047648 EMBL:AY560856 EMBL:BT015876 EMBL:BT020188
IPI:IPI00535860 RefSeq:NP_199234.1 UniGene:At.30087
ProteinModelPortal:Q9FE67 SMR:Q9FE67 IntAct:Q9FE67 STRING:Q9FE67
EnsemblPlants:AT5G44210.1 GeneID:834444 KEGG:ath:AT5G44210
TAIR:At5g44210 eggNOG:NOG249494 InParanoid:Q9FE67 OMA:FACHRER
PhylomeDB:Q9FE67 ProtClustDB:CLSN2916712 Genevestigator:Q9FE67
GermOnline:AT5G44210 Uniprot:Q9FE67
Length = 200
Score = 149 (57.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 34/67 (50%), Positives = 42/67 (62%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
++GV +P GR+ A+I + K RVWLGTF EEAAR YDTAA FRG A TNF
Sbjct: 33 FRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPG 92
Query: 91 ETDDEDD 97
E+ +D
Sbjct: 93 ESTTVND 99
>TAIR|locus:2176511 [details] [associations]
symbol:AT5G43410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025638 HOGENOM:HOG000237624
EMBL:AY560864 EMBL:DQ447034 EMBL:DQ653344 IPI:IPI00538759
RefSeq:NP_199154.1 UniGene:At.50627 ProteinModelPortal:Q9LSX0
SMR:Q9LSX0 EnsemblPlants:AT5G43410.1 GeneID:834360
KEGG:ath:AT5G43410 TAIR:At5g43410 eggNOG:NOG244602
InParanoid:Q9LSX0 OMA:HEYNMGS PhylomeDB:Q9LSX0
ProtClustDB:CLSN2681785 Genevestigator:Q9LSX0 Uniprot:Q9LSX0
Length = 131
Score = 148 (57.2 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KH-QRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
KY+GV +P G++ A+I + KH +RVWLGTF EEAAR YD AA RGQ AI NF
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNF 71
>TAIR|locus:2132962 [details] [associations]
symbol:CRF4 "AT4G27950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161572 GO:GO:0048366 EMBL:AL035524
GO:GO:0042991 HOGENOM:HOG000237664 ProtClustDB:CLSN2686526
EMBL:BT033088 EMBL:AY560872 IPI:IPI00529666 PIR:T02896
RefSeq:NP_194524.2 UniGene:At.49716 ProteinModelPortal:Q9SUE3
SMR:Q9SUE3 IntAct:Q9SUE3 EnsemblPlants:AT4G27950.1 GeneID:828908
KEGG:ath:AT4G27950 TAIR:At4g27950 eggNOG:NOG284469
InParanoid:Q9SUE3 OMA:FLEPEQE Genevestigator:Q9SUE3 Uniprot:Q9SUE3
Length = 335
Score = 166 (63.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 13 DHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVY 70
D + + + +++K KY+GV +P G+W A+I E+ +R+WLGTF EEAA VY
Sbjct: 102 DSTVQKPSVSGQNQK----KYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVY 157
Query: 71 DTAALRFRGQNAITNFRTSLETD 93
D AA++ RG +A+TNF E +
Sbjct: 158 DNAAIKLRGPDALTNFTVQPEPE 180
>TAIR|locus:2032500 [details] [associations]
symbol:ERF11 "ERF domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009863 "salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA;TAS] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AB055882 EMBL:AC010155
EMBL:AF360232 EMBL:AY040032 EMBL:AY086783 IPI:IPI00529285
PIR:B86410 RefSeq:NP_174159.1 UniGene:At.11834
ProteinModelPortal:Q9C5I3 SMR:Q9C5I3 STRING:Q9C5I3 PRIDE:Q9C5I3
EnsemblPlants:AT1G28370.1 GeneID:839733 KEGG:ath:AT1G28370
TAIR:At1g28370 eggNOG:NOG305458 InParanoid:Q9C5I3 OMA:RAIEFRG
PhylomeDB:Q9C5I3 ProtClustDB:CLSN2912737 Genevestigator:Q9C5I3
GermOnline:AT1G28370 Uniprot:Q9C5I3
Length = 166
Score = 147 (56.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+Y+GV +P GR+ A+I + K RVWLGTF EEAAR YD A+ FRG A TNF
Sbjct: 19 RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNF 75
>TAIR|locus:2086203 [details] [associations]
symbol:ESE1 "ethylene and salt inducible 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025608
HOGENOM:HOG000237624 EMBL:AY974196 EMBL:AY560847 EMBL:BT028890
IPI:IPI00539423 RefSeq:NP_188963.2 UniGene:At.50677
ProteinModelPortal:Q9LTC6 SMR:Q9LTC6 EnsemblPlants:AT3G23220.1
GeneID:821900 KEGG:ath:AT3G23220 TAIR:At3g23220 eggNOG:NOG265349
InParanoid:Q9LTC6 OMA:NFPAEAR PhylomeDB:Q9LTC6
ProtClustDB:CLSN2920270 Genevestigator:Q9LTC6 Uniprot:Q9LTC6
Length = 139
Score = 145 (56.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 24 ESKKLPSSKYKGVVPQPNGRWGAQIYE--KH-QRVWLGTFIEEEEAARVYDTAALRFRGQ 80
ES KY+GV +P G++ A+I + +H RVWLGTF E+AAR YD AA RGQ
Sbjct: 5 ESYNTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQ 64
Query: 81 NAITNF 86
AI NF
Sbjct: 65 RAILNF 70
>TAIR|locus:2024249 [details] [associations]
symbol:ERF10 "ERF domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC003027
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047649 EMBL:AY560879 IPI:IPI00526738 PIR:E86168
RefSeq:NP_171876.1 UniGene:At.50567 ProteinModelPortal:Q9ZWA2
SMR:Q9ZWA2 STRING:Q9ZWA2 EnsemblPlants:AT1G03800.1 GeneID:839173
KEGG:ath:AT1G03800 TAIR:At1g03800 eggNOG:NOG291029 OMA:QTAVEEP
PhylomeDB:Q9ZWA2 ProtClustDB:CLSN2914355 Genevestigator:Q9ZWA2
Uniprot:Q9ZWA2
Length = 245
Score = 158 (60.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 26 KKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAI 83
+K +Y+GV +P GR+ A+I + K +RVWLG+F EEAAR YD+AA+RFRG A
Sbjct: 46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKAT 105
Query: 84 TNF 86
TNF
Sbjct: 106 TNF 108
>TAIR|locus:2076720 [details] [associations]
symbol:CRF6 "AT3G61630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042991 "transcription factor import
into nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 GO:GO:0048366
EMBL:AL132959 GO:GO:0048825 GO:GO:0042991 HOGENOM:HOG000237664
ProtClustDB:CLSN2683458 EMBL:BX822244 IPI:IPI00528170 PIR:T47955
RefSeq:NP_191722.1 UniGene:At.34258 ProteinModelPortal:Q9M374
SMR:Q9M374 IntAct:Q9M374 STRING:Q9M374 EnsemblPlants:AT3G61630.1
GeneID:825336 KEGG:ath:AT3G61630 TAIR:At3g61630 eggNOG:NOG296971
InParanoid:Q9M374 OMA:HINEIRI PhylomeDB:Q9M374
Genevestigator:Q9M374 Uniprot:Q9M374
Length = 315
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/136 (33%), Positives = 66/136 (48%)
Query: 3 SNSSSVDLDHDHNLSENGI--DAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLG 58
S+SS+ H E+ + D S + KY+GV +P G++ A+I + R+WLG
Sbjct: 73 SSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWLG 132
Query: 59 TFIEEEEAARVYDTAALRFRGQNAITNFRT--------SLETDDEDDYMEKIFLSSHSKA 110
TF+ EEAA YD AA+ +G A+TNF T L+T DY S HS
Sbjct: 133 TFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSRQSLHSPT 192
Query: 111 EIVDMLRKHTYKHELE 126
++ +HE+E
Sbjct: 193 SVLRFNVNEETEHEIE 208
>TAIR|locus:2074765 [details] [associations]
symbol:CEJ1 "cooperatively regulated by ethylene and
jasmonate 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009617 "response to bacterium"
evidence=IEP] [GO:0010941 "regulation of cell death" evidence=IMP]
[GO:0042742 "defense response to bacterium" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0010941 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0042742 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL132976 HOGENOM:HOG000237624
ProtClustDB:CLSN2914757 EMBL:AY045579 EMBL:AY093792 IPI:IPI00543652
PIR:T45572 RefSeq:NP_190595.1 UniGene:At.1423
ProteinModelPortal:Q9SNE1 SMR:Q9SNE1 STRING:Q9SNE1
EnsemblPlants:AT3G50260.1 GeneID:824188 KEGG:ath:AT3G50260
TAIR:At3g50260 eggNOG:NOG306351 InParanoid:Q9SNE1 OMA:PELLPCT
PhylomeDB:Q9SNE1 Genevestigator:Q9SNE1 Uniprot:Q9SNE1
Length = 153
Score = 123 (48.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 31/78 (39%), Positives = 39/78 (50%)
Query: 22 DAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRG 79
D K +KG+ + G+W A+I E K R+WLG++ E AAR YDTA RG
Sbjct: 10 DVAVKMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRG 69
Query: 80 QNAITNFRTSLE-TDDED 96
A NF L T ED
Sbjct: 70 PTATLNFPELLPCTSAED 87
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 286 GVVRLFGVNILEDPNNL 302
G++ L +N L DP NL
Sbjct: 130 GLLELVDLNKLPDPENL 146
>TAIR|locus:2009655 [details] [associations]
symbol:ERF8 "ethylene response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC008007 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000237624 ProtClustDB:CLSN2679790 EMBL:AB036884
EMBL:AK117541 EMBL:BT005401 IPI:IPI00546471 PIR:D96572
RefSeq:NP_175725.1 UniGene:At.4604 ProteinModelPortal:Q9MAI5
SMR:Q9MAI5 IntAct:Q9MAI5 EnsemblPlants:AT1G53170.1 GeneID:841751
KEGG:ath:AT1G53170 TAIR:At1g53170 eggNOG:NOG271218
InParanoid:Q9MAI5 OMA:HESNAAK PhylomeDB:Q9MAI5
Genevestigator:Q9MAI5 GermOnline:AT1G53170 Uniprot:Q9MAI5
Length = 185
Score = 143 (55.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 24 ESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQN 81
ES +Y+GV +P GR+ A+I + K RVWLGTF ++AAR YD AA FRG
Sbjct: 22 ESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVK 81
Query: 82 AITNF 86
A TNF
Sbjct: 82 AKTNF 86
>TAIR|locus:2018289 [details] [associations]
symbol:ERF14 "Ethylene-responsive element binding factor
14" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC000104 HOGENOM:HOG000237624
ProtClustDB:CLSN2681785 EMBL:AY560880 EMBL:BT026421 IPI:IPI00531659
PIR:D86175 RefSeq:NP_171932.1 UniGene:At.50643
ProteinModelPortal:P93822 SMR:P93822 STRING:P93822 PRIDE:P93822
EnsemblPlants:AT1G04370.1 GeneID:839539 KEGG:ath:AT1G04370
TAIR:At1g04370 eggNOG:NOG309663 InParanoid:P93822 OMA:NKTHNIN
PhylomeDB:P93822 Genevestigator:P93822 Uniprot:P93822
Length = 133
Score = 141 (54.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KH-QRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
KY+GV +P G++ A+I + KH +RVWLGTF E+AAR YD AA RG+ AI NF
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNF 76
>TAIR|locus:2198978 [details] [associations]
symbol:AT1G80580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC018849 EMBL:AY560844 EMBL:DQ446446 EMBL:BT026038
IPI:IPI00519694 PIR:H96837 RefSeq:NP_178173.1 UniGene:At.50665
ProteinModelPortal:Q9M8M5 SMR:Q9M8M5 EnsemblPlants:AT1G80580.1
GeneID:844397 KEGG:ath:AT1G80580 TAIR:At1g80580 eggNOG:NOG291220
HOGENOM:HOG000090320 InParanoid:Q9M8M5 OMA:KPEPENT PhylomeDB:Q9M8M5
ProtClustDB:CLSN2714206 Genevestigator:Q9M8M5 Uniprot:Q9M8M5
Length = 256
Score = 154 (59.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 36/78 (46%), Positives = 44/78 (56%)
Query: 13 DHNLSENGIDAESKKLPSSK--YKGVVPQPNGRWGAQIYEKHQRV--WLGTFIEEEEAAR 68
DH E G+ +K+P + GV +P GRW A+I ++ R WLGTF EEAAR
Sbjct: 95 DHLTKEGGVK-RGRKMPQKTGGFMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAAR 153
Query: 69 VYDTAALRFRGQNAITNF 86
YD AA R RG A TNF
Sbjct: 154 AYDAAARRLRGTKAKTNF 171
>TAIR|locus:2176095 [details] [associations]
symbol:ABR1 "ABA REPRESSOR1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0009749 GO:GO:0003700 GO:GO:0006351
GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025637
EMBL:AY140092 EMBL:BT008480 IPI:IPI00536757 RefSeq:NP_201280.1
UniGene:At.27199 UniGene:At.71233 HSSP:O80337
ProteinModelPortal:Q9FGF8 SMR:Q9FGF8 STRING:Q9FGF8
EnsemblPlants:AT5G64750.1 GeneID:836596 KEGG:ath:AT5G64750
TAIR:At5g64750 eggNOG:NOG310508 HOGENOM:HOG000006008
InParanoid:Q9FGF8 OMA:SYSEMAR PhylomeDB:Q9FGF8
ProtClustDB:CLSN2914923 Genevestigator:Q9FGF8 GO:GO:0009788
Uniprot:Q9FGF8
Length = 391
Score = 159 (61.0 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 29 PSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
P +Y+GV +P G+W A+I + K RVWLGTF E AAR YD AALRFRG A NF
Sbjct: 181 PRRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNF 240
>TAIR|locus:2128429 [details] [associations]
symbol:CRF2 "AT4G23750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048364 "root development" evidence=IEP] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161560 GO:GO:0048825 GO:GO:0042991
EMBL:AL035394 HOGENOM:HOG000237664 ProtClustDB:CLSN2685996
EMBL:AY057475 EMBL:AY140049 EMBL:BT015038 IPI:IPI00549106
PIR:T05607 RefSeq:NP_194106.1 RefSeq:NP_974599.1 UniGene:At.26323
UniGene:At.67317 ProteinModelPortal:Q9SUQ2 SMR:Q9SUQ2 IntAct:Q9SUQ2
EnsemblPlants:AT4G23750.1 EnsemblPlants:AT4G23750.2 GeneID:828475
KEGG:ath:AT4G23750 TAIR:At4g23750 eggNOG:NOG263971
InParanoid:Q9SUQ2 OMA:PRIKFTE PhylomeDB:Q9SUQ2
Genevestigator:Q9SUQ2 Uniprot:Q9SUQ2
Length = 343
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 21 IDAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFR 78
+ A + K++GV +P G+W A+I + K R+WLGT+ EEAA VYD AA++ R
Sbjct: 110 VSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLR 169
Query: 79 GQNAITNFRTSLETDDE 95
G +A+TNF + T E
Sbjct: 170 GPDALTNFSVTPTTATE 186
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/115 (35%), Positives = 67/115 (58%)
Query: 163 LFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQKVWRLRYCYW-- 220
LFEK L+ SD G++ R+V+PK AE +F S+ S+G+ L +D + W ++ YW
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQ--SEGIPLKIQDVRGREWTFQFRYWPN 351
Query: 221 SSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQN-GNGSG 274
++S+ YVL +G + ++ ++AGDTV+F S V KL + + N G+ G
Sbjct: 352 NNSRMYVL-EGVTPCIQSMMLQAGDTVTF--SRVDPGGKLIMGSRKAANAGDMQG 403
>TAIR|locus:2086223 [details] [associations]
symbol:ERF1 "ethylene response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0006952
"defense response" evidence=IMP] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=TAS] [GO:0009873 "ethylene
mediated signaling pathway" evidence=IGI;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006952 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025608
GO:GO:0009867 HOGENOM:HOG000237624 EMBL:AF076277 EMBL:AF076278
EMBL:AF428390 EMBL:AY133629 EMBL:AY086078 IPI:IPI00537111
RefSeq:NP_188965.1 UniGene:At.6341 UniGene:At.74125
ProteinModelPortal:Q8LDC8 SMR:Q8LDC8 PaxDb:Q8LDC8 PRIDE:Q8LDC8
EnsemblPlants:AT3G23240.1 GeneID:821902 KEGG:ath:AT3G23240
GeneFarm:4728 TAIR:At3g23240 eggNOG:NOG331104 InParanoid:Q8LDC8
KO:K14516 OMA:NDSEEMF PhylomeDB:Q8LDC8 ProtClustDB:CLSN2914712
Genevestigator:Q8LDC8 GermOnline:AT3G23240 Uniprot:Q8LDC8
Length = 218
Score = 146 (56.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 44/129 (34%), Positives = 66/129 (51%)
Query: 13 DHNLSENGIDAESKKLP----SSK-----YKGVVPQPNGRWGAQIYEKHQ---RVWLGTF 60
+ + + ID++S+ LP SS+ Y+GV +P G++ A+I + + RVWLGTF
Sbjct: 53 EQSTQQTYIDSDSQDLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTF 112
Query: 61 IEEEEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHT 120
EEAA YD AA RG +AI NF S E E E + + +V + RKH+
Sbjct: 113 ESAEEAALAYDQAAFSMRGSSAILNF--SAERVQES-LSEIKYTYEDGCSPVVALKRKHS 169
Query: 121 YKHELEQSK 129
+ + K
Sbjct: 170 MRRRMTNKK 178
>TAIR|locus:2086213 [details] [associations]
symbol:TDR1 "Transcriptional Regulator of Defense
Response 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AB025608 HOGENOM:HOG000237624 EMBL:AJ580377 IPI:IPI00538070
RefSeq:NP_188964.2 UniGene:At.37741 ProteinModelPortal:Q9LTC5
SMR:Q9LTC5 STRING:Q9LTC5 EnsemblPlants:AT3G23230.1 GeneID:821901
KEGG:ath:AT3G23230 TAIR:At3g23230 eggNOG:NOG239208
InParanoid:Q9LTC5 OMA:DKQARFR PhylomeDB:Q9LTC5
ProtClustDB:CLSN2918542 Genevestigator:Q9LTC5 Uniprot:Q9LTC5
Length = 139
Score = 134 (52.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 15 NLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYD 71
N S N + K+ ++++GV +P G++ A+I + + R+WLGTF EEAAR YD
Sbjct: 5 NRSSNNQSQDDKQ---ARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYD 61
Query: 72 TAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKA 110
AA RG AI NF +D + + SS S +
Sbjct: 62 RAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSS 100
>TAIR|locus:2183174 [details] [associations]
symbol:RAP2.11 "related to AP2 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0000302 "response to reactive
oxygen species" evidence=IEP] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0035865 "cellular response to potassium
ion" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0048528 "post-embryonic root development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0009723 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0000302 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0035865
EMBL:AF296838 GO:GO:0048528 EMBL:AF003104 EMBL:AY560854
IPI:IPI00543417 RefSeq:NP_197480.1 UniGene:At.49039
UniGene:At.71012 ProteinModelPortal:Q6J9S1 SMR:Q6J9S1 STRING:Q6J9S1
EnsemblPlants:AT5G19790.1 GeneID:832099 KEGG:ath:AT5G19790
TAIR:At5g19790 eggNOG:NOG268154 HOGENOM:HOG000242199
InParanoid:Q6J9S1 OMA:IERQISA PhylomeDB:Q6J9S1
ProtClustDB:CLSN2713867 Genevestigator:Q6J9S1 Uniprot:Q6J9S1
Length = 253
Score = 149 (57.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 13 DHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVY 70
+H + E K +K+ GV +P+G+W A+I + Q R+WLGTF EEAAR Y
Sbjct: 2 EHQTTPKQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAY 61
Query: 71 DTAALRFRGQNAITNF 86
D AA RG N TNF
Sbjct: 62 DEAACLLRGSNTRTNF 77
>TAIR|locus:2197076 [details] [associations]
symbol:RAP2.12 "related to AP2 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070483 "detection of hypoxia" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC009324 GO:GO:0070483 HOGENOM:HOG000237624
EMBL:AY037260 EMBL:AY057545 EMBL:AY113051 EMBL:AY088204
EMBL:AF003105 IPI:IPI00535772 PIR:D96579 RefSeq:NP_001031185.1
RefSeq:NP_175794.1 UniGene:At.20952 UniGene:At.21295
ProteinModelPortal:Q9SSA8 SMR:Q9SSA8 IntAct:Q9SSA8 STRING:Q9SSA8
EnsemblPlants:AT1G53910.1 EnsemblPlants:AT1G53910.2 GeneID:841829
KEGG:ath:AT1G53910 TAIR:At1g53910 eggNOG:NOG262386
InParanoid:Q9SSA8 OMA:NEDAVTT PhylomeDB:Q9SSA8
ProtClustDB:CLSN2682146 Genevestigator:Q9SSA8 Uniprot:Q9SSA8
Length = 358
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 20 GIDAESKKLPSSK----YKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVYDTA 73
G+D +++K + K Y+G+ +P G+W A+I + + R+WLGTF EEAAR YD A
Sbjct: 108 GLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAA 167
Query: 74 ALRFRGQNAITNF 86
A R RG A NF
Sbjct: 168 ARRIRGSKAKVNF 180
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 39/130 (30%), Positives = 67/130 (51%)
Query: 124 ELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPK 183
EL SK+ + + S D + + F + L EK L SDVG L R+V+PK
Sbjct: 131 ELVDSKRQLMMLNLKNNVQISDKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPK 190
Query: 184 QQAEKHFALSSEIASKGLLLNFEDS-TQKVWRLRYCYWSSSQS--YVLTKGWSRFVKEKG 240
+ AE + S+ +G+++ D + + W +Y +WS+++S YVL + FVK+ G
Sbjct: 191 RDAEANLPKLSD--KEGIVVQMRDVFSMQSWSFKYKFWSNNKSRMYVL-ENTGEFVKQNG 247
Query: 241 VKAGDTVSFW 250
+ GD ++ +
Sbjct: 248 AEIGDFLTIY 257
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 42/122 (34%), Positives = 69/122 (56%)
Query: 160 VEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASK-GLLLNFED-STQKVWRLRY 217
+ FL +KVL SDVG L R+V+PK+ AE H E+ ++ G+ + ED T +VW +RY
Sbjct: 533 LRFLLQKVLKQSDVGSLGRIVLPKE-AEVHLP---ELKTRDGVSIPMEDIGTSQVWNMRY 588
Query: 218 CYWSSSQSYV-LTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKL----QQNGNG 272
+W +++S + L + FV+ ++ GD + + S++ S L K+ Q+ GN
Sbjct: 589 RFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIY-SDIKSGKYLIRGVKVRRAAQEQGNS 647
Query: 273 SG 274
SG
Sbjct: 648 SG 649
>TAIR|locus:2136078 [details] [associations]
symbol:CRF1 "AT4G11140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA;IDA] [GO:0048366 "leaf development" evidence=RCA;IMP]
[GO:0048825 "cotyledon development" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 GO:GO:0048825 GO:GO:0042991 EMBL:AY560849
EMBL:AF080120 EMBL:AL049876 EMBL:BT025176 IPI:IPI00542737
PIR:T01919 RefSeq:NP_192852.1 UniGene:At.33584
ProteinModelPortal:O82503 SMR:O82503 IntAct:O82503 PRIDE:O82503
EnsemblPlants:AT4G11140.1 GeneID:826715 KEGG:ath:AT4G11140
TAIR:At4g11140 eggNOG:NOG254393 HOGENOM:HOG000237664
InParanoid:O82503 OMA:SSWHVED PhylomeDB:O82503
ProtClustDB:CLSN2685996 Genevestigator:O82503 Uniprot:O82503
Length = 287
Score = 146 (56.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
K++GV +P G+W A+I + + RVWLGTF EEAA VYD AA++ RG NA NF
Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPP 145
Query: 90 LETDDEDD 97
T++ ++
Sbjct: 146 PVTENVEE 153
Score = 38 (18.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 136 GISCYNNSSGFSDLFGSNCFQE 157
G S + S DLFG N F +
Sbjct: 227 GFSTSMSESFGGDLFGDNLFAD 248
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 156 (60.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 42/127 (33%), Positives = 71/127 (55%)
Query: 163 LFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQKVWRLRYCYW-- 220
LFEKVL+ SD G++ R+V+PK AE +F S +GL L +D K W ++ +W
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPIS--LPEGLPLKIQDIKGKEWVFQFRFWPN 342
Query: 221 SSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGNGSGFEEMQS 280
++S+ YVL +G + ++ ++AGDTV+F R+ KL + + N + + S
Sbjct: 343 NNSRMYVL-EGVTPCIQSMQLQAGDTVTFSRTE--PEGKLVMGYRKATNSTATQMFKGSS 399
Query: 281 QVPNIGV 287
+ PN+ +
Sbjct: 400 E-PNLNM 405
>TAIR|locus:2183861 [details] [associations]
symbol:Rap2.6L "related to AP2 6l" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071497 "cellular response to freezing"
evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
[GO:0010260 "organ senescence" evidence=RCA] [GO:0010583 "response
to cyclopentenone" evidence=RCA] [GO:0046482 "para-aminobenzoic
acid metabolic process" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009753 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163491 EMBL:AY560861
EMBL:BT011609 EMBL:BT012250 IPI:IPI00516288 PIR:T48580
RefSeq:NP_196837.1 UniGene:At.32083 UniGene:At.67565
UniGene:At.75194 ProteinModelPortal:Q9LYU3 SMR:Q9LYU3 IntAct:Q9LYU3
STRING:Q9LYU3 PaxDb:Q9LYU3 PRIDE:Q9LYU3 EnsemblPlants:AT5G13330.1
GeneID:831174 KEGG:ath:AT5G13330 TAIR:At5g13330 eggNOG:NOG270575
HOGENOM:HOG000112331 InParanoid:Q9LYU3 OMA:PRRRHYR PhylomeDB:Q9LYU3
ProtClustDB:CLSN2916600 Genevestigator:Q9LYU3 GO:GO:0071497
Uniprot:Q9LYU3
Length = 212
Score = 142 (55.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
Y+GV +P G+W A+I + K RVWLGTF EEAA YD AAL+F+G A NF
Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94
>UNIPROTKB|Q5MFV2 [details] [associations]
symbol:BIERF2 "BTH-induced ERF transcriptional factor 2"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831393 ProteinModelPortal:Q5MFV2 SMR:Q5MFV2
Gramene:Q5MFV2 Uniprot:Q5MFV2
Length = 235
Score = 144 (55.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 31/56 (55%), Positives = 37/56 (66%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
Y+GV +P GR+ A+I + K RVWLGT+ EEAAR YD AA FRG A TNF
Sbjct: 34 YRGVRKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAKAKTNF 89
>TAIR|locus:2090975 [details] [associations]
symbol:RAP2.2 "related to AP2 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IEP] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB022220
HOGENOM:HOG000237624 ProtClustDB:CLSN2682146 EMBL:AY054539
EMBL:BT000374 EMBL:AY085580 EMBL:AF003095 IPI:IPI00519633
IPI:IPI00544839 RefSeq:NP_566482.1 RefSeq:NP_850582.1
UniGene:At.25146 ProteinModelPortal:Q9LUM4 SMR:Q9LUM4 STRING:Q9LUM4
EnsemblPlants:AT3G14230.1 GeneID:820643 KEGG:ath:AT3G14230
TAIR:At3g14230 eggNOG:NOG250271 InParanoid:Q9LUM4 OMA:SAFDCED
PhylomeDB:Q9LUM4 Genevestigator:Q9LUM4 Uniprot:Q9LUM4
Length = 379
Score = 149 (57.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 22 DAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRG 79
+ SK+ ++Y+G+ +P G+W A+I + K R WLGTF EEAAR YD AA R RG
Sbjct: 117 EKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRG 176
Query: 80 QNAITNF 86
A NF
Sbjct: 177 TKAKVNF 183
>TAIR|locus:2176187 [details] [associations]
symbol:AT5G51190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AB023044 HOGENOM:HOG000272710
EMBL:AY072345 EMBL:AY114590 EMBL:AY086290 IPI:IPI00545838
RefSeq:NP_568755.1 UniGene:At.19728 ProteinModelPortal:Q8VY90
SMR:Q8VY90 STRING:Q8VY90 PaxDb:Q8VY90 EnsemblPlants:AT5G51190.1
GeneID:835193 KEGG:ath:AT5G51190 TAIR:At5g51190 eggNOG:NOG301109
InParanoid:Q8VY90 OMA:PLEAGKH PhylomeDB:Q8VY90
ProtClustDB:CLSN2917752 Genevestigator:Q8VY90 Uniprot:Q8VY90
Length = 221
Score = 140 (54.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 33 YKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV +P G++ A+I + ++ RVWLGTF EAAR YD AA + RG AI NF
Sbjct: 72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLE 131
Query: 90 L-ETDDEDDYMEKIFLSSHSKAEIVD----MLRKHTYKHELEQSKQNYAC 134
+ +D D + I L + K ++ + ++ + K E E Q AC
Sbjct: 132 AGKHEDLGDNKKTISLKAKRKRQVTEDESQLISRKAVKRE-EAQVQADAC 180
>TAIR|locus:2156171 [details] [associations]
symbol:AT5G61890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB022212 EMBL:AY560862 IPI:IPI00539427
RefSeq:NP_200995.1 UniGene:At.29079 ProteinModelPortal:Q9FH54
SMR:Q9FH54 PaxDb:Q9FH54 PRIDE:Q9FH54 EnsemblPlants:AT5G61890.1
GeneID:836310 KEGG:ath:AT5G61890 TAIR:At5g61890 eggNOG:NOG273323
HOGENOM:HOG000057294 InParanoid:Q9FH54 OMA:FSARSQH PhylomeDB:Q9FH54
ProtClustDB:CLSN2686950 ArrayExpress:Q9FH54 Genevestigator:Q9FH54
Uniprot:Q9FH54
Length = 248
Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/97 (37%), Positives = 46/97 (47%)
Query: 4 NSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFI 61
N SV D N + L Y+GV +P G+W A+I + K RVWLGTF
Sbjct: 61 NYPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFE 120
Query: 62 EEEEAARVYDTAALRFRGQNAITNFRTSLETDDEDDY 98
E AA YD AAL+F+G A NF ++ Y
Sbjct: 121 TAESAALAYDEAALKFKGSKAKLNFPERVQLGSNSTY 157
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 109 KAEIVDMLRKHTYKHELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFEKVL 168
K EI+ + K + + E S + + S D + + + K L
Sbjct: 198 KPEILPRVVKSSDELETRNSNVEFHSETVGTLPESKQGHDSRATKLLNSGEYQVILRKEL 257
Query: 169 TPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQKV-WRLRYCYWSSSQS-- 225
T SDVG + R+V+PK+ AE +L + L+L+ +D V W+ +Y YW +++S
Sbjct: 258 TKSDVGNVGRIVLPKKDAEA--SLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRM 315
Query: 226 YVLTKGWSRFVKEKGVKAGDTVSFWRS 252
Y+L F+K G++AGD + +++
Sbjct: 316 YILDSA-GEFLKTHGLQAGDVIIIYKN 341
>TAIR|locus:505006142 [details] [associations]
symbol:CRF7 "AT1G22985" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AF000657 EMBL:AY062541 EMBL:AY093336 EMBL:AY087064
IPI:IPI00540393 RefSeq:NP_564186.1 UniGene:At.27304
ProteinModelPortal:Q8W4I5 SMR:Q8W4I5 IntAct:Q8W4I5
EnsemblPlants:AT1G22985.1 GeneID:838906 KEGG:ath:AT1G22985
TAIR:At1g22985 eggNOG:NOG242741 HOGENOM:HOG000112390
InParanoid:Q8W4I5 OMA:SDPPEVG PhylomeDB:Q8W4I5
ProtClustDB:CLSN2687921 Genevestigator:Q8W4I5 Uniprot:Q8W4I5
Length = 159
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 32 KYKGVVPQPNGRWGAQIY-----EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
K++GV +P G+W A+I + +R+WLGTF EEAA YD AA++ G +A TNF
Sbjct: 74 KFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133
>TAIR|locus:2038500 [details] [associations]
symbol:ORA59 "octadecanoid-responsive Arabidopsis AP2/ERF
59" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0009861 "jasmonic acid and
ethylene-dependent systemic resistance" evidence=IMP] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009753 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC025290 GO:GO:0009861
HOGENOM:HOG000237624 ProtClustDB:CLSN2682286 EMBL:AK228085
EMBL:BT011001 EMBL:BT014958 IPI:IPI00523269 PIR:B86197
RefSeq:NP_172106.1 UniGene:At.42354 ProteinModelPortal:Q9LND1
SMR:Q9LND1 STRING:Q9LND1 EnsemblPlants:AT1G06160.1 GeneID:837125
KEGG:ath:AT1G06160 TAIR:At1g06160 eggNOG:NOG324429
InParanoid:Q9LND1 OMA:FAFESSI PhylomeDB:Q9LND1
Genevestigator:Q9LND1 Uniprot:Q9LND1
Length = 244
Score = 141 (54.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/143 (29%), Positives = 73/143 (51%)
Query: 16 LSENGIDAESKKLPSSK-YKGVVPQPNGRWGAQIYE---KHQRVWLGTFIEEEEAARVYD 71
+ E G +A K Y+GV +P G++ A+I + K RVWLGTF E AA YD
Sbjct: 64 IKEEGKEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYD 123
Query: 72 TAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHELEQSKQN 131
AA +G A+ NF + ++ ME + L+ ++ ++ + RKH+ ++ K++
Sbjct: 124 QAAFALKGSLAVLNFPADV-VEESLRKMENVNLND-GESPVIALKRKHSMRNRPRGKKKS 181
Query: 132 YACVGI-SCYNNSSGFSDLFGSN 153
+ + S ++SS +S S+
Sbjct: 182 SSSSTLTSSPSSSSSYSSSSSSS 204
>TAIR|locus:2026301 [details] [associations]
symbol:CRF8 "AT1G71130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016036 "cellular
response to phosphate starvation" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC016972
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000112390
ProtClustDB:CLSN2687921 EMBL:AK175578 EMBL:AK175683 EMBL:AK175740
EMBL:AK175774 EMBL:AK175931 EMBL:AK176043 EMBL:AK176144
EMBL:AK176280 EMBL:BT025618 EMBL:AY085910 IPI:IPI00531448
PIR:H96735 RefSeq:NP_565012.1 UniGene:At.35227 UniGene:At.74176
ProteinModelPortal:Q9C995 SMR:Q9C995 IntAct:Q9C995
EnsemblPlants:AT1G71130.1 GeneID:843453 KEGG:ath:AT1G71130
TAIR:At1g71130 eggNOG:NOG245226 InParanoid:Q9C995 OMA:RIIRISF
PhylomeDB:Q9C995 Genevestigator:Q9C995 Uniprot:Q9C995
Length = 161
Score = 125 (49.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 21 IDAESKKLPSS--KYKGVVPQPNGRWGAQIY-------EKHQRVWLGTFIEEEEAARVYD 71
I AE K + KY+GV +P G+W A+I + R+WLGTF EEAA YD
Sbjct: 65 IPAEFLKTAKTEKKYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYD 124
Query: 72 TAALRFRGQNAITNFRTSLETDDEDD 97
A+++ G +A TNF L ++++D
Sbjct: 125 NASIKLIGPHAPTNF--GLPAENQED 148
>TAIR|locus:2008021 [details] [associations]
symbol:ERF3 "ethylene responsive element binding factor
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010105 EMBL:AC079279
HOGENOM:HOG000237624 EMBL:AB008105 EMBL:AC012561 EMBL:BT025295
EMBL:AK228091 IPI:IPI00534661 IPI:IPI00837459 PIR:T52011
RefSeq:NP_175479.1 UniGene:At.1645 UniGene:At.71718
ProteinModelPortal:O80339 SMR:O80339 IntAct:O80339 STRING:O80339
EnsemblPlants:AT1G50640.1 GeneID:841486 KEGG:ath:AT1G50640
TAIR:At1g50640 eggNOG:NOG251938 InParanoid:O80339 OMA:TKRYPRT
PhylomeDB:O80339 ProtClustDB:CLSN2682907 Genevestigator:O80339
GermOnline:AT1G50640 Uniprot:O80339
Length = 225
Score = 139 (54.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+++GV +P GR+ A+I + K RVWLGTF EEAAR YD+AA RG A TNF
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNF 83
>TAIR|locus:2062954 [details] [associations]
symbol:CRF5 "AT2G46310" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IGI] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 GO:GO:0048366 EMBL:AC005397 GO:GO:0048825
GO:GO:0042991 HOGENOM:HOG000237664 EMBL:AY074638 EMBL:BT003121
EMBL:AK227661 IPI:IPI00528508 PIR:C84901 RefSeq:NP_182154.1
UniGene:At.37025 ProteinModelPortal:O82339 SMR:O82339 IntAct:O82339
EnsemblPlants:AT2G46310.1 GeneID:819239 KEGG:ath:AT2G46310
TAIR:At2g46310 eggNOG:NOG253877 InParanoid:O82339 OMA:SHNDETE
PhylomeDB:O82339 ProtClustDB:CLSN2683458 Genevestigator:O82339
Uniprot:O82339
Length = 294
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 17 SENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAA 74
+ENG D + KY+GV +P G++ A+I + R+WLGTF EEAA YD AA
Sbjct: 86 AENGGDLVKSVV---KYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAA 142
Query: 75 LRFRGQNAITNFRT 88
+R +G NA TNF T
Sbjct: 143 IRIKGHNAQTNFLT 156
>TAIR|locus:2032510 [details] [associations]
symbol:ERF12 "ERF domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AC010155 EMBL:AB055883
EMBL:AY099798 EMBL:BT002604 IPI:IPI00525007 RefSeq:NP_174158.1
UniGene:At.40906 ProteinModelPortal:Q94ID6 SMR:Q94ID6 IntAct:Q94ID6
STRING:Q94ID6 EnsemblPlants:AT1G28360.1 GeneID:839732
KEGG:ath:AT1G28360 TAIR:At1g28360 eggNOG:NOG295943
InParanoid:Q94ID6 OMA:CAREVHY PhylomeDB:Q94ID6
ProtClustDB:CLSN2679392 Genevestigator:Q94ID6 GermOnline:AT1G28360
Uniprot:Q94ID6
Length = 189
Score = 133 (51.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/63 (50%), Positives = 38/63 (60%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
Y+GV +P GR+ A+I + K RVWLGTF EEAA YD AA RG A TNF + L
Sbjct: 12 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPL 71
Query: 91 ETD 93
D
Sbjct: 72 SLD 74
>TAIR|locus:2195985 [details] [associations]
symbol:AT1G77200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 EMBL:AC004260 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY560875 EMBL:DQ446437 EMBL:DQ652938 IPI:IPI00531080
PIR:T00449 RefSeq:NP_177844.1 UniGene:At.50584
ProteinModelPortal:O80654 SMR:O80654 EnsemblPlants:AT1G77200.1
GeneID:844056 KEGG:ath:AT1G77200 TAIR:At1g77200 eggNOG:NOG297347
InParanoid:O80654 OMA:DENGISM PhylomeDB:O80654
ProtClustDB:CLSN2912844 Genevestigator:O80654 Uniprot:O80654
Length = 244
Score = 140 (54.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 11 DHDHNLSENGIDAESKKLPSSK-YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAA 67
DH H+ ++ K++ S Y+GV + G+W ++I E K R+WLGTF E AA
Sbjct: 20 DHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAA 79
Query: 68 RVYDTAALRFRGQNAITNF 86
R +D AAL +G +A+ NF
Sbjct: 80 RAHDAAALTIKGTSAVLNF 98
>TAIR|locus:2183304 [details] [associations]
symbol:AT5G07310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163912 HOGENOM:HOG000057294
ProtClustDB:CLSN2686950 EMBL:AY560885 EMBL:DQ653268 EMBL:BT025717
IPI:IPI00548342 PIR:T49870 RefSeq:NP_196348.1 UniGene:At.50703
ProteinModelPortal:Q9LY29 SMR:Q9LY29 IntAct:Q9LY29 STRING:Q9LY29
EnsemblPlants:AT5G07310.1 GeneID:830622 KEGG:ath:AT5G07310
TAIR:At5g07310 eggNOG:NOG290249 InParanoid:Q9LY29 OMA:GNQSSSH
PhylomeDB:Q9LY29 ArrayExpress:Q9LY29 Genevestigator:Q9LY29
Uniprot:Q9LY29
Length = 263
Score = 141 (54.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF---- 86
Y+GV +P G+W A+I + K RVWLGTF E AA YD AAL+F+G A NF
Sbjct: 92 YRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERA 151
Query: 87 ----RTSLETDDEDDYME--KIFLSS-HSKAEIVDMLRKHTYKHELEQSKQNYACVGISC 139
TS T + Y +I+ S+ + + + ++ Y L Q + + S
Sbjct: 152 QLASNTSTTTGPPNYYSSNNQIYYSNPQTNPQTIPYFNQYYYNQYLHQGGNSNDALSYSL 211
Query: 140 YNNSSGFS 147
+G S
Sbjct: 212 AGGETGGS 219
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 160 VEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQ-KVWRLRYC 218
+ FLF+K L SDV L RM++PK+ AE H L + +G+ + ED VW +Y
Sbjct: 88 LRFLFQKELKNSDVSSLRRMILPKKAAEAH--LPALECKEGIPIRMEDLDGFHVWTFKYR 145
Query: 219 YW--SSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSN 257
YW ++S+ YVL + FV G++ GD + ++ +N
Sbjct: 146 YWPNNNSRMYVL-ENTGDFVNAHGLQLGDFIMVYQDLYSNN 185
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 106 SHSKAEIVDMLRKHTYKHELEQSKQNYACVGISCYNNSSGFSDLFGSNCFQETPVEFLFE 165
S K + + + R T + ++ Q A S +NS+ + F NC +E V +
Sbjct: 244 SDIKDQPIVLRRSDTESEKNDELDQTPASEPSSMSHNSANSTIRF--NC-REYRV--ILR 298
Query: 166 KVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFED-STQKVWRLRYCYWSSSQ 224
K LT SDVG + R+V+PK+ AE H + +G++L +D + W +Y +W +++
Sbjct: 299 KELTNSDVGNIGRIVMPKRDAEAHLPALHQ--REGVMLKMDDFKLETTWNFKYRFWPNNK 356
Query: 225 S--YVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFI 262
S YVL + FVK+ ++ GD ++S+ + KL +
Sbjct: 357 SRMYVL-ESTGGFVKQHVLQTGDIFIIYKSS--ESEKLVV 393
>TAIR|locus:2058641 [details] [associations]
symbol:DEAR3 "DREB and EAR motif protein 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002391 HOGENOM:HOG000237624
EMBL:AK118495 EMBL:BT003741 IPI:IPI00528876 PIR:T00498
RefSeq:NP_179915.1 UniGene:At.43320 ProteinModelPortal:O22174
SMR:O22174 EnsemblPlants:AT2G23340.1 GeneID:816866
KEGG:ath:AT2G23340 TAIR:At2g23340 eggNOG:NOG273209
InParanoid:O22174 OMA:LPDPENS PhylomeDB:O22174
ProtClustDB:CLSN2683886 Genevestigator:O22174 Uniprot:O22174
Length = 176
Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 25 SKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNA 82
++K YKG+ + G+W A+I E K R+WLG++ E AAR YDTA RG +A
Sbjct: 20 TRKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSA 79
Query: 83 ITNF 86
NF
Sbjct: 80 RLNF 83
>TAIR|locus:2158118 [details] [associations]
symbol:AT5G67000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AB026640 HOGENOM:HOG000112333
ProtClustDB:CLSN2683315 EMBL:DQ145775 EMBL:AY560859 EMBL:BT024702
IPI:IPI00521061 RefSeq:NP_201501.2 UniGene:At.64325
UniGene:At.74244 ProteinModelPortal:Q38Q40 SMR:Q38Q40
EnsemblPlants:AT5G67000.1 GeneID:836835 KEGG:ath:AT5G67000
TAIR:At5g67000 eggNOG:euNOG11383 OMA:NDQNENF PhylomeDB:Q38Q40
Genevestigator:Q38Q40 Uniprot:Q38Q40
Length = 184
Score = 130 (50.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 24 ESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVYDTAALRFRGQN 81
E KK KYKGV +P+G+W A+I++ R WLGTF+ E AA+ Y+ AA +R +
Sbjct: 114 EVKK--EKKYKGVRKKPSGKWAAEIWDPRSKSRRWLGTFLTAEMAAQSYNDAAAEYRARR 171
Query: 82 AITN 85
TN
Sbjct: 172 GKTN 175
>TAIR|locus:2092339 [details] [associations]
symbol:ERF7 "ethylene response factor 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006952 GO:GO:0009873
GO:GO:0009414 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB024036
HOGENOM:HOG000237624 ProtClustDB:CLSN2682907 EMBL:AB032201
EMBL:AY037254 EMBL:AY094001 EMBL:AY085023 EMBL:AK228460
IPI:IPI00537654 RefSeq:NP_188666.1 UniGene:At.20161
ProteinModelPortal:Q9LDE4 SMR:Q9LDE4 IntAct:Q9LDE4 STRING:Q9LDE4
PaxDb:Q9LDE4 PRIDE:Q9LDE4 EnsemblPlants:AT3G20310.1 GeneID:821575
KEGG:ath:AT3G20310 TAIR:At3g20310 eggNOG:NOG322216
InParanoid:Q9LDE4 OMA:VAPEDCH PhylomeDB:Q9LDE4
Genevestigator:Q9LDE4 GermOnline:AT3G20310 Uniprot:Q9LDE4
Length = 244
Score = 138 (53.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 30/57 (52%), Positives = 37/57 (64%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+Y+GV +P GR+ A+I + K RVWLGTF +AAR YDTAA RG A TNF
Sbjct: 26 RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNF 82
>TAIR|locus:2151576 [details] [associations]
symbol:AT5G61590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710
EMBL:AY045968 EMBL:AY079321 EMBL:AY085939 IPI:IPI00538118
RefSeq:NP_200967.1 UniGene:At.24138 ProteinModelPortal:Q9FKG2
SMR:Q9FKG2 STRING:Q9FKG2 EnsemblPlants:AT5G61590.1 GeneID:836280
KEGG:ath:AT5G61590 TAIR:At5g61590 eggNOG:NOG268094
InParanoid:Q9FKG2 OMA:TSPEVET PhylomeDB:Q9FKG2
ProtClustDB:CLSN2686928 Genevestigator:Q9FKG2 Uniprot:Q9FKG2
Length = 201
Score = 133 (51.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 2 ASNSSSVDLDHDHNLSENGIDAESKKLPSSK-YKGVVPQPNGRWGAQIYE---KHQRVWL 57
+S+SSS + N ++K+ ++ Y+GV +P G++ A+I + K R+WL
Sbjct: 77 SSSSSSTTTSPEVETVSNR--KKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWL 134
Query: 58 GTFIEEEEAARVYDTAALRFRGQNAITNF 86
GTF + +AAR YD AA + RG+ A+ NF
Sbjct: 135 GTFESDIDAARAYDYAAFKLRGRKAVLNF 163
>UNIPROTKB|Q5MFV3 [details] [associations]
symbol:BIERF1 "BTH-induced ERF transcriptional factor 1"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831392
ProteinModelPortal:Q5MFV3 SMR:Q5MFV3 Gramene:Q5MFV3 Uniprot:Q5MFV3
Length = 399
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 16 LSENGIDAES-KKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDT 72
+ +G A S K+ ++Y+G+ +P G+W A+I + K RVWLGT+ EEAAR YD
Sbjct: 121 VQHDGPTARSAKRKRKNQYRGIRQRPWGKWAAEIRDPSKGVRVWLGTYNTAEEAARAYDA 180
Query: 73 AALRFRGQNAITNF 86
A + RG+ A NF
Sbjct: 181 EARKIRGKKAKVNF 194
>TAIR|locus:2201103 [details] [associations]
symbol:DREB26 "dehydration response element-binding
protein 26" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP] [GO:0034605
"cellular response to heat" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071497 "cellular response to freezing" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0034605
GO:GO:0009753 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 GO:GO:0071497 EMBL:AC013482
EMBL:AK176679 EMBL:BT024616 EMBL:AY085925 IPI:IPI00521591
PIR:D86352 RefSeq:NP_173609.1 UniGene:At.41636
ProteinModelPortal:Q9SFE4 SMR:Q9SFE4 STRING:Q9SFE4 PaxDb:Q9SFE4
PRIDE:Q9SFE4 EnsemblPlants:AT1G21910.1 GeneID:838793
KEGG:ath:AT1G21910 TAIR:At1g21910 eggNOG:NOG318827
InParanoid:Q9SFE4 OMA:YEDADIP PhylomeDB:Q9SFE4
ProtClustDB:CLSN2714459 Genevestigator:Q9SFE4 Uniprot:Q9SFE4
Length = 230
Score = 136 (52.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 43/153 (28%), Positives = 69/153 (45%)
Query: 3 SNSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTF 60
S+S S + S + ++KK KYKGV + G W ++I +Q R+WLG++
Sbjct: 20 SSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSY 79
Query: 61 IEEEEAARVYDTAALRFRGQNAITNFRTSLETDDE-DDYMEKIFLSSHSKAEIVDMLRKH 119
E AAR YD A L +G A NF TS + D+ +++ L S + V +
Sbjct: 80 STAEAAARAYDVALLCLKGPQANLNFPTSSSSHHLLDNLLDENTLLSPKSIQRVAAQAAN 139
Query: 120 TYKHELEQSKQNYACVGISCYNNSSGFSDLFGS 152
++ H S + +++ G L GS
Sbjct: 140 SFNHFAPTSSA-VSSPSDHDHHHDDGMQSLMGS 171
>TAIR|locus:2116224 [details] [associations]
symbol:RRTF1 "redox responsive transcription factor 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0050832 "defense
response to fungus" evidence=IEP] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL035521 EMBL:AL161585 EMBL:AY064151 EMBL:AY120700
EMBL:AF325091 IPI:IPI00529364 PIR:T04787 RefSeq:NP_195167.1
UniGene:At.48936 UniGene:At.66607 ProteinModelPortal:Q9SZ06
SMR:Q9SZ06 STRING:Q9SZ06 EnsemblPlants:AT4G34410.1 GeneID:829591
KEGG:ath:AT4G34410 TAIR:At4g34410 eggNOG:NOG290278
HOGENOM:HOG000243182 InParanoid:Q9SZ06 OMA:GNTIADM PhylomeDB:Q9SZ06
ProtClustDB:CLSN2718216 Genevestigator:Q9SZ06 Uniprot:Q9SZ06
Length = 268
Score = 138 (53.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 17 SENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVYDTAA 74
+E G +K + Y+GV +P G++ A+I + + RVWLGTF E+AAR YD AA
Sbjct: 120 AEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAA 179
Query: 75 LRFRGQNAITNF 86
+ FRG A NF
Sbjct: 180 IGFRGPRAKLNF 191
>TAIR|locus:2089368 [details] [associations]
symbol:EBP "ethylene-responsive element binding protein"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity"
evidence=IEA;ISS;IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051707 "response to other
organism" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0008219 "cell
death" evidence=IMP] [GO:0010286 "heat acclimation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009753 "response
to jasmonic acid stimulus" evidence=IEP] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009735
GO:GO:0009753 GO:GO:0006950 GO:GO:0009873 GO:GO:0003677
GO:GO:0008219 GO:GO:0003700 GO:GO:0006351 GO:GO:0051707 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB022217
HOGENOM:HOG000237624 EMBL:Y09942 EMBL:Z37504 EMBL:AF003096
EMBL:AY059917 EMBL:AY035100 EMBL:AY142562 EMBL:AY087488
IPI:IPI00516463 RefSeq:NP_188299.1 UniGene:At.24773
ProteinModelPortal:P42736 SMR:P42736 IntAct:P42736 STRING:P42736
EnsemblPlants:AT3G16770.1 GeneID:820929 KEGG:ath:AT3G16770
TAIR:At3g16770 eggNOG:NOG300006 InParanoid:P42736 OMA:WSELDAS
PhylomeDB:P42736 ProtClustDB:CLSN2684019 Genevestigator:P42736
GermOnline:AT3G16770 Uniprot:P42736
Length = 248
Score = 137 (53.3 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 5 SSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIE 62
++ V++ + E + ++ + Y+G+ +P G+W A+I + K RVWLGTF
Sbjct: 51 TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNT 110
Query: 63 EEEAARVYDTAALRFRGQNAITNF 86
EEAA YD AA + RG A NF
Sbjct: 111 AEEAAMAYDVAAKQIRGDKAKLNF 134
>TAIR|locus:2005493 [details] [associations]
symbol:AP2 "APETALA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;TAS]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0048316 "seed development" evidence=IMP] [GO:0010073 "meristem
maintenance" evidence=IMP] [GO:0009888 "tissue development"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA;TAS]
[GO:0048481 "ovule development" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009908 "flower development" evidence=TAS] [GO:0019953 "sexual
reproduction" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048316
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010093 GO:GO:0048481
EMBL:Z99707 EMBL:AL161590 EMBL:U12546 EMBL:AY128328 IPI:IPI00523209
PIR:A85436 RefSeq:NP_001190938.1 RefSeq:NP_195410.1 UniGene:At.4638
ProteinModelPortal:P47927 SMR:P47927 STRING:P47927
EnsemblPlants:AT4G36920.1 EnsemblPlants:AT4G36920.2 GeneID:829845
KEGG:ath:AT4G36920 TAIR:At4g36920 eggNOG:NOG247476
HOGENOM:HOG000033977 InParanoid:P47927 KO:K09284 OMA:SIYDEEL
PhylomeDB:P47927 ProtClustDB:CLSN2915922 Genevestigator:P47927
GermOnline:AT4G36920 GO:GO:0010073 Uniprot:P47927
Length = 432
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 30 SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRT 88
SS+Y+GV + GRW + I++ ++V+LG F AAR YD AA++FRG A NF
Sbjct: 129 SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNI 188
Query: 89 SLETDDEDDYMEKIFLSSHSKAEIVDMLRKHT 120
DD DD +++ +++ +K E V +LR+ +
Sbjct: 189 ----DDYDDDLKQ--MTNLTKEEFVHVLRRQS 214
Score = 133 (51.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 30 SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
SSKY+GV GRW A++ + + V+LG F E EAAR YD AA++ G++A+TNF
Sbjct: 221 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFD 280
Query: 88 TSLETDDE 95
S+ D+E
Sbjct: 281 PSIY-DEE 287
>TAIR|locus:2010346 [details] [associations]
symbol:AT1G12890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC012187 EMBL:AB493454 IPI:IPI00523616
RefSeq:NP_172749.1 UniGene:At.51591 ProteinModelPortal:Q3E703
SMR:Q3E703 EnsemblPlants:AT1G12890.1 GeneID:837847
KEGG:ath:AT1G12890 TAIR:At1g12890 eggNOG:NOG258941
HOGENOM:HOG000215011 InParanoid:Q3E703 OMA:YTENTSL
ProtClustDB:CLSN2914226 Genevestigator:Q3E703 Uniprot:Q3E703
Length = 219
Score = 134 (52.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 36/74 (48%), Positives = 40/74 (54%)
Query: 24 ESKKLPSSKYKGVVPQPNGRWGAQIYEKH--QRVWLGTFIEEEEAARVYDTAALRFRGQN 81
E KKL KY GV +P GR+ A+I +R WLGTF EEAA YD AA G
Sbjct: 12 EEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSL 71
Query: 82 AITNF----RTSLE 91
A TNF TSLE
Sbjct: 72 ATTNFFYTENTSLE 85
>UNIPROTKB|Q8VXC3 [details] [associations]
symbol:ebp-89 "Ethylene responsive protein" species:4530
"Oryza sativa" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
EMBL:AJ304840 ProteinModelPortal:Q8VXC3 SMR:Q8VXC3
KEGG:dosa:Os03t0182800-01 Gramene:Q8VXC3 Genevestigator:Q8VXC3
Uniprot:Q8VXC3
Length = 326
Score = 139 (54.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 26 KKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAI 83
K SKY+GV +P+GR+ A+I + K +RVWLGT+ EEAA YD A R RG+ A
Sbjct: 115 KASKKSKYRGVRLRPSGRFAAEIRDPKKGRRVWLGTYGSAEEAAMAYDREARRIRGKGAR 174
Query: 84 TNF 86
NF
Sbjct: 175 LNF 177
>UNIPROTKB|Q5MFV0 [details] [associations]
symbol:BIERF4 "BTH-induced ERF transcriptional factor 4"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IC] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831395 ProteinModelPortal:Q5MFV0
KEGG:dosa:Os03t0183300-01 Gramene:Q5MFV0 Uniprot:Q5MFV0
Length = 329
Score = 138 (53.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 23 AESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQ 80
A S++ ++Y+GV +P G+W A+I + K RVWLGTF E AA YD AA RG
Sbjct: 87 ASSRRRKPAQYRGVRRRPWGKWAAEIRDPVKGIRVWLGTFTNAEAAALAYDDAARAIRGD 146
Query: 81 NAITNFRTSLETD 93
A NF ++ D
Sbjct: 147 RAKLNFPSATTPD 159
>TAIR|locus:2024076 [details] [associations]
symbol:DRNL "DORNROSCHEN-like" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009880
"embryonic pattern specification" evidence=IMP] [GO:0048825
"cotyledon development" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009733 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0051726
HSSP:O80337 GO:GO:0009736 EMBL:AC000103 GO:GO:0009880 GO:GO:0048825
eggNOG:NOG305471 EMBL:AY560889 EMBL:BT026073 IPI:IPI00520168
RefSeq:NP_173864.1 UniGene:At.64842 ProteinModelPortal:Q9FYK5
SMR:Q9FYK5 IntAct:Q9FYK5 STRING:Q9FYK5 EnsemblPlants:AT1G24590.1
GeneID:839073 KEGG:ath:AT1G24590 TAIR:At1g24590
HOGENOM:HOG000112400 InParanoid:Q9FYK5 OMA:NDVVHES PhylomeDB:Q9FYK5
ProtClustDB:CLSN2914184 Genevestigator:Q9FYK5 GO:GO:0009740
Uniprot:Q9FYK5
Length = 306
Score = 128 (50.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
+Y+GV +P GR+ A+I + +R WLGTF EEAA YD AA RG A TNF
Sbjct: 57 RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYP 116
Query: 90 LETDDEDDYMEKIFLS 105
+ + D Y +IF S
Sbjct: 117 MPS--LDSYHHRIFSS 130
Score = 47 (21.6 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 261 FIDCKLQQNGNGSGF 275
F K+QQNGNG F
Sbjct: 283 FDSAKMQQNGNGGMF 297
>TAIR|locus:2124504 [details] [associations]
symbol:AT4G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337 EMBL:AL161548
EMBL:AL021710 EMBL:AY560868 IPI:IPI00543138 PIR:T04541
RefSeq:NP_193580.1 UniGene:At.32901 ProteinModelPortal:O49515
SMR:O49515 EnsemblPlants:AT4G18450.1 GeneID:827576
KEGG:ath:AT4G18450 TAIR:At4g18450 eggNOG:NOG286829
HOGENOM:HOG000241588 OMA:EWTEILD PhylomeDB:O49515
ProtClustDB:CLSN2915846 Genevestigator:O49515 Uniprot:O49515
Length = 303
Score = 137 (53.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 32 KYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYDTAALRFRG-QNAITNFR 87
KY+GV +P G++ A+I + + RVWLGTF EEAA YD AA+R RG Q A TNF+
Sbjct: 109 KYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNFQ 168
Query: 88 TSLET 92
LET
Sbjct: 169 --LET 171
>TAIR|locus:1005716457 [details] [associations]
symbol:RAP2.9 "related to AP2 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AB073166 EMBL:AY560869 EMBL:BT024689 EMBL:AF003102 EMBL:Z37270
IPI:IPI00535753 RefSeq:NP_849340.1 UniGene:At.47204
ProteinModelPortal:Q8W3M3 SMR:Q8W3M3 EnsemblPlants:AT4G06746.1
GeneID:826148 KEGG:ath:AT4G06746 TAIR:At4g06746 eggNOG:NOG320996
InParanoid:Q8W3M3 OMA:NKLPEAY PhylomeDB:Q8W3M3
ProtClustDB:CLSN2918026 Genevestigator:Q8W3M3 Uniprot:Q8W3M3
Length = 150
Score = 118 (46.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+YKG+ + G+W A+I E K R+WLG++ AAR YDTA RG +A NF
Sbjct: 35 RYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNF 91
>TAIR|locus:2145477 [details] [associations]
symbol:SHN3 "shine3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC006258
HOGENOM:HOG000237624 ProtClustDB:CLSN2692546 EMBL:AK118780
EMBL:BT005461 EMBL:BX834028 IPI:IPI00539200 IPI:IPI00541689
RefSeq:NP_197921.1 RefSeq:NP_851073.1 UniGene:At.19636
ProteinModelPortal:Q3E958 SMR:Q3E958 IntAct:Q3E958
EnsemblPlants:AT5G25390.2 GeneID:832611 KEGG:ath:AT5G25390
TAIR:At5g25390 eggNOG:NOG243679 InParanoid:Q3E958 OMA:LDNDSSH
PhylomeDB:Q3E958 Genevestigator:Q3E958 Uniprot:Q3E958
Length = 189
Score = 128 (50.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 30 SSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
S K++GV + G W ++I +RVWLGTF E AAR YD AA+ GQ+A TNF
Sbjct: 4 SKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP 63
Query: 88 TSLETDDEDDYMEKIFLSSHSKAEIVDM-LRKH 119
+ S S +E+++ LRK+
Sbjct: 64 VIKSNGSNSLEINSALRSPKSLSELLNAKLRKN 96
>TAIR|locus:2200477 [details] [associations]
symbol:ADAP "ARIA-interacting double AP2 domain protein"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0010187
"negative regulation of seed germination" evidence=IMP] [GO:0040008
"regulation of growth" evidence=IMP] [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IPI] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IGI;IMP] [GO:1901959 "positive
regulation of cutin biosynthetic process" evidence=IGI] [GO:0009887
"organ morphogenesis" evidence=ISS] [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010187
GO:GO:0040008 KO:K09285 EMBL:AC010924 EMBL:AY045915 EMBL:AY133880
IPI:IPI00524024 IPI:IPI00535618 PIR:D86295 RefSeq:NP_563990.1
RefSeq:NP_973839.1 UniGene:At.11854 ProteinModelPortal:Q94AN4
SMR:Q94AN4 IntAct:Q94AN4 PRIDE:Q94AN4 EnsemblPlants:AT1G16060.1
GeneID:838176 KEGG:ath:AT1G16060 TAIR:At1g16060 eggNOG:NOG326907
HOGENOM:HOG000238389 InParanoid:Q94AN4 OMA:MESQSKE PhylomeDB:Q94AN4
ProtClustDB:CLSN2917011 Genevestigator:Q94AN4 Uniprot:Q94AN4
Length = 345
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/109 (35%), Positives = 62/109 (56%)
Query: 31 SKYKGVVPQP-NGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
SKY+GV NGRW A+I ++ ++LGT+ +EEAA YD AA+ +RG NA+TNF
Sbjct: 159 SKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFD 218
Query: 88 TS--LET---DDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHELEQSKQN 131
S L+ ++ D + S HS ++ + K ++ +L QS+ +
Sbjct: 219 ISRYLKLPVPENPIDTANNLLESPHS--DLSPFI-KPNHESDLSQSQSS 264
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 30 SSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
+ +Y+ + N W +K ++V+LG + EE+ AAR YD AAL++ G++ I NF
Sbjct: 68 TGRYEAHLWDKNS-WNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLC 126
Query: 90 LETDDEDDYMEKIFLSSHSKAEIVDMLRK 118
+ E+D E + S SK E + LR+
Sbjct: 127 ---NYEEDIKE---MESQSKEEYIGSLRR 149
>TAIR|locus:2131854 [details] [associations]
symbol:CBF1 "C-repeat/DRE binding factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEP;IMP;TAS]
[GO:0009631 "cold acclimation" evidence=IEP;IMP] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247
eggNOG:NOG303203 ProtClustDB:CLSN2687445 EMBL:U77378 EMBL:AB007788
EMBL:AB013816 IPI:IPI00540988 PIR:JE0298 RefSeq:NP_567721.1
UniGene:At.232 ProteinModelPortal:P93835 SMR:P93835 IntAct:P93835
STRING:P93835 PRIDE:P93835 EnsemblPlants:AT4G25490.1 GeneID:828653
KEGG:ath:AT4G25490 GeneFarm:3595 TAIR:At4g25490
HOGENOM:HOG000237624 InParanoid:P93835 PhylomeDB:P93835
Genevestigator:P93835 GermOnline:AT4G25490 Uniprot:P93835
Length = 213
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV + +G+W +++ E K R+WLGTF E AAR +D AAL RG++A NF S
Sbjct: 48 YRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADS 106
>TAIR|locus:2017829 [details] [associations]
symbol:WRI4 "WRINKLED 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IPI]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IGI;IMP] [GO:1901959 "positive regulation of
cutin biosynthetic process" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 KO:K09285 HOGENOM:HOG000238389 EMBL:AC010793
UniGene:At.21701 UniGene:At.48398 IPI:IPI00846298
RefSeq:NP_001077849.1 ProteinModelPortal:A8MQS2 SMR:A8MQS2
STRING:A8MQS2 EnsemblPlants:AT1G79700.2 GeneID:844309
KEGG:ath:AT1G79700 OMA:GKLATEE ProtClustDB:CLSN2680813
Genevestigator:A8MQS2 Uniprot:A8MQS2
Length = 313
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 31 SKYKGVVPQP-NGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
SKY+GV NGRW A+I ++ ++LGT+ +EEAA YD AA+ +RG NA+TNF
Sbjct: 153 SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFD 212
Query: 88 TS 89
S
Sbjct: 213 VS 214
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 41/128 (32%), Positives = 68/128 (53%)
Query: 2 ASNSSSVDLDHDHNLSENGIDAESKKLPSSKYKGVVPQP-NGRWGAQIYEKH-------- 52
AS S+S+ L +A ++ SS Y+GV GR+ A +++K+
Sbjct: 24 ASESASIALTSKRKRKSPPRNAPLQR--SSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTK 81
Query: 53 --QRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKA 110
++V+LG + EEE AAR YD AAL++ G++ + NF L + DED +++ + SK
Sbjct: 82 KGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNF--PLPSYDED--VKE--MEGQSKE 135
Query: 111 EIVDMLRK 118
E + LR+
Sbjct: 136 EYIGSLRR 143
>TAIR|locus:2155598 [details] [associations]
symbol:TOE3 "target of early activation tagged (EAT) 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009408
"response to heat" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB020742
HOGENOM:HOG000033977 KO:K09284 EMBL:AK176145 EMBL:BT029206
EMBL:AY088238 IPI:IPI00536061 RefSeq:NP_201519.1 UniGene:At.28821
UniGene:At.28822 ProteinModelPortal:Q9FH95 SMR:Q9FH95 PRIDE:Q9FH95
EnsemblPlants:AT5G67180.1 GeneID:836853 KEGG:ath:AT5G67180
TAIR:At5g67180 eggNOG:NOG326403 InParanoid:Q9FH95 OMA:PDHHEES
PhylomeDB:Q9FH95 ProtClustDB:CLSN2916545 Genevestigator:Q9FH95
Uniprot:Q9FH95
Length = 352
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 30 SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
SSKY+GV GRW +++ + + V+LG F E EAAR YD AA++ G++A+TNF
Sbjct: 186 SSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFD 245
Query: 88 TSLETDDED 96
+ ++ED
Sbjct: 246 PKVYEEEED 254
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/93 (35%), Positives = 56/93 (60%)
Query: 30 SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRT 88
SS+Y+GV + GRW + I++ ++V+LG F AAR YD AA++FRG +A NF
Sbjct: 94 SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINF-- 151
Query: 89 SLETDDEDDYMEKIF-LSSHSKAEIVDMLRKHT 120
D +DY++ + + + +K E + +LR+ +
Sbjct: 152 -----DIEDYLDDLKQMGNLTKEEFMHVLRRQS 179
>TAIR|locus:2042496 [details] [associations]
symbol:ERF15 "ethylene-responsive element binding factor
15" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC006593 HOGENOM:HOG000237624
EMBL:AY070443 EMBL:AY096563 IPI:IPI00528983 PIR:B84718
RefSeq:NP_850162.1 UniGene:At.28356 ProteinModelPortal:Q8VYM0
SMR:Q8VYM0 EnsemblPlants:AT2G31230.1 GeneID:817680
KEGG:ath:AT2G31230 TAIR:At2g31230 eggNOG:NOG236239
InParanoid:Q8VYM0 OMA:ESPEMMI PhylomeDB:Q8VYM0
ProtClustDB:CLSN2682286 Genevestigator:Q8VYM0 GermOnline:AT2G31230
Uniprot:Q8VYM0
Length = 243
Score = 133 (51.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 9 DLDHDHNLSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEE 65
D+ + + GID E Y+GV +P G++ A+I + + RVWLGTF + EE
Sbjct: 68 DVSNSEEEEKVGIDEERS------YRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEE 121
Query: 66 AARVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHEL 125
AA YD AA +G A NF + + ME + L + ++ + RKH+ ++
Sbjct: 122 AALAYDQAAFATKGSLATLNFPVEVVRESLKK-MENVNLHDGG-SPVMALKRKHSLRNR- 178
Query: 126 EQSKQNYACVGISCYNNSS 144
+ K+ + S N+SS
Sbjct: 179 PRGKKRSSSSSSSSSNSSS 197
>TAIR|locus:2008216 [details] [associations]
symbol:PLT2 "PLETHORA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000239258 KO:K09285 GO:GO:0007389 GO:GO:0019827
eggNOG:NOG311645 GO:GO:0051302 EMBL:AC006085
ProtClustDB:CLSN2680750 EMBL:AY506550 EMBL:AY585681 EMBL:BT020277
EMBL:BT020460 IPI:IPI00543980 PIR:F96549 RefSeq:NP_175530.2
UniGene:At.49968 ProteinModelPortal:Q5YGP7 SMR:Q5YGP7 IntAct:Q5YGP7
STRING:Q5YGP7 EnsemblPlants:AT1G51190.1 GeneID:841542
KEGG:ath:AT1G51190 TAIR:At1g51190 InParanoid:Q5YGP7 OMA:CASNAPN
PhylomeDB:Q5YGP7 Genevestigator:Q5YGP7 Uniprot:Q5YGP7
Length = 568
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/137 (32%), Positives = 67/137 (48%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV +GRW A+I ++ ++LGTF EEEAA YD AA++FRG NA+TNF
Sbjct: 290 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 349
Query: 87 RTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHELEQSKQNYACVGISC----YNN 142
+ Y K L S++ ++ LE S++ + + Y
Sbjct: 350 EINR-------YDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQYGA 402
Query: 143 SSGFSDLFGSNCFQETP 159
+SG S + S+ Q P
Sbjct: 403 ASGSSSVASSSRLQLQP 419
>TAIR|locus:2038927 [details] [associations]
symbol:AT2G20350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006569 EMBL:AY560881
EMBL:BT024698 IPI:IPI00533025 PIR:B84588 RefSeq:NP_179625.1
UniGene:At.50667 ProteinModelPortal:Q9SK67 SMR:Q9SK67
EnsemblPlants:AT2G20350.1 GeneID:816554 KEGG:ath:AT2G20350
TAIR:At2g20350 eggNOG:NOG253925 HOGENOM:HOG000112333 OMA:PPLNAGP
PhylomeDB:Q9SK67 ProtClustDB:CLSN2683315 Genevestigator:Q9SK67
Uniprot:Q9SK67
Length = 158
Score = 116 (45.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 32 KYKGVVPQPNGRWGAQIYEKHQRV--WLGTFIEEEEAARVYDTAALRFRGQNA 82
K+KGV +P+G+W A+I++ +V WLGTF E AA+ Y+ AA F G+ +
Sbjct: 86 KHKGVRKKPSGKWAAEIWDPSLKVRRWLGTFPTAEMAAKAYNDAAAEFVGRRS 138
>TAIR|locus:2091891 [details] [associations]
symbol:PLT1 "PLETHORA 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0009734 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000239258 GO:GO:0007389 GO:GO:0019827
GO:GO:0051302 EMBL:AB025629 EMBL:AY506549 EMBL:AY585682
IPI:IPI00534725 RefSeq:NP_188720.2 UniGene:At.38171
ProteinModelPortal:Q5YGP8 SMR:Q5YGP8 EnsemblPlants:AT3G20840.1
GeneID:821632 KEGG:ath:AT3G20840 TAIR:At3g20840 eggNOG:NOG263958
InParanoid:Q5YGP8 OMA:NSSYHEL PhylomeDB:Q5YGP8
ProtClustDB:CLSN2680750 Genevestigator:Q5YGP8 Uniprot:Q5YGP8
Length = 574
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV +GRW A+I ++ ++LGTF EEEAA YD AA++FRG NA+TNF
Sbjct: 281 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 340
>TAIR|locus:2129116 [details] [associations]
symbol:ERF-1 "ethylene responsive element binding factor
1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343
EMBL:AL161546 EMBL:AY058174 EMBL:AY062533 EMBL:BT002578
EMBL:AB008103 IPI:IPI00518702 PIR:A85196 PIR:T51988
RefSeq:NP_567530.4 UniGene:At.23185 UniGene:At.68141 PDB:1GCC
PDB:2GCC PDB:3GCC PDBsum:1GCC PDBsum:2GCC PDBsum:3GCC
ProteinModelPortal:O80337 SMR:O80337 STRING:O80337
EnsemblPlants:AT4G17500.1 GeneID:827464 KEGG:ath:AT4G17500
TAIR:At4g17500 eggNOG:NOG246525 HOGENOM:HOG000239314
InParanoid:O80337 OMA:PVYCRST PhylomeDB:O80337
ProtClustDB:CLSN2715394 EvolutionaryTrace:O80337
Genevestigator:O80337 GermOnline:AT4G17500 Uniprot:O80337
Length = 268
Score = 133 (51.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 33 YKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV +P G++ A+I + + RVWLGTF E+AA YD AA R RG A+ NF
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207
Query: 90 LETDDEDDYMEKIFLSSHSKA 110
+ + + D K SS S +
Sbjct: 208 VNSGEPDPVRIKSKRSSFSSS 228
>TAIR|locus:2145249 [details] [associations]
symbol:tny "TINY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009825 "multidimensional cell growth" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
ProtClustDB:CLSN2686631 EMBL:AC005405 EMBL:X94698 EMBL:AY560855
EMBL:BT024923 IPI:IPI00548044 PIR:T01076 RefSeq:NP_197953.1
UniGene:At.5373 ProteinModelPortal:Q39127 SMR:Q39127 IntAct:Q39127
STRING:Q39127 EnsemblPlants:AT5G25810.1 GeneID:832650
KEGG:ath:AT5G25810 GeneFarm:3729 TAIR:At5g25810 eggNOG:NOG248116
InParanoid:Q39127 OMA:SWEASAV PhylomeDB:Q39127
Genevestigator:Q39127 Uniprot:Q39127
Length = 218
Score = 130 (50.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/71 (46%), Positives = 42/71 (59%)
Query: 24 ESKKLP---SSK---YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAAL 75
E KK P S K Y+GV + G+W ++I E K R+WLGTF E AAR +D AAL
Sbjct: 21 EEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAAL 80
Query: 76 RFRGQNAITNF 86
+G +AI NF
Sbjct: 81 SIKGASAILNF 91
>TAIR|locus:2037698 [details] [associations]
symbol:SHN1 "SHINE 1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0010166 "wax metabolic process" evidence=IMP]
[GO:0010143 "cutin biosynthetic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC007591 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 GO:GO:0010143 HOGENOM:HOG000237624
ProtClustDB:CLSN2692546 EMBL:AY378101 EMBL:AK117941 EMBL:BT005220
EMBL:AY085720 IPI:IPI00534091 PIR:B86288 RefSeq:NP_172988.1
UniGene:At.11422 ProteinModelPortal:Q9XI33 SMR:Q9XI33 STRING:Q9XI33
EnsemblPlants:AT1G15360.1 GeneID:838105 KEGG:ath:AT1G15360
TAIR:At1g15360 eggNOG:NOG290838 InParanoid:Q9XI33 OMA:DTASSHI
Genevestigator:Q9XI33 GO:GO:0010166 Uniprot:Q9XI33
Length = 199
Score = 128 (50.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 30 SSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+ K++GV + G W A+I +R+WLGTF EEAAR YD AA+ G+NA TNF
Sbjct: 4 TKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNF 62
>TAIR|locus:2825329 [details] [associations]
symbol:AT1G71450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC016163 HOGENOM:HOG000237624
EMBL:BT010764 EMBL:BT011790 IPI:IPI00540458 RefSeq:NP_177301.1
UniGene:At.43565 UniGene:At.66830 ProteinModelPortal:Q9C9I2
SMR:Q9C9I2 EnsemblPlants:AT1G71450.1 GeneID:843486
KEGG:ath:AT1G71450 TAIR:At1g71450 eggNOG:NOG312881
InParanoid:Q9C9I2 OMA:DSIRMAV PhylomeDB:Q9C9I2
ProtClustDB:CLSN2914602 Genevestigator:Q9C9I2 Uniprot:Q9C9I2
Length = 183
Score = 125 (49.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 24 ESKKLPSSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQN 81
+ K +PS+ Y+GV + G+W ++I E R+WLG+F E AA YD AA FRG+
Sbjct: 16 DGKGVPSA-YRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGRE 74
Query: 82 AITNF 86
A NF
Sbjct: 75 ARLNF 79
>TAIR|locus:2173113 [details] [associations]
symbol:CBF4 "C-repeat-binding factor 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB015478
ProtClustDB:CLSN2687445 HOGENOM:HOG000237624 EMBL:AY560857
EMBL:DQ447064 EMBL:DQ653361 IPI:IPI00533847 RefSeq:NP_200012.1
UniGene:At.64286 ProteinModelPortal:Q9FJ93 SMR:Q9FJ93 STRING:Q9FJ93
EnsemblPlants:AT5G51990.1 GeneID:835274 KEGG:ath:AT5G51990
GeneFarm:3598 TAIR:At5g51990 eggNOG:NOG249958 InParanoid:Q9FJ93
OMA:RIPETTC PhylomeDB:Q9FJ93 ArrayExpress:Q9FJ93
Genevestigator:Q9FJ93 Uniprot:Q9FJ93
Length = 224
Score = 130 (50.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV + +G+W ++ E K R+WLGTF E AAR +D AAL RG++A NF S
Sbjct: 54 YRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADS 112
>TAIR|locus:2131849 [details] [associations]
symbol:DREB1A "dehydration response element B1A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009409
"response to cold" evidence=IEP;RCA;IDA;IMP;TAS] [GO:0009414
"response to water deprivation" evidence=RCA;IMP;IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB007787 EMBL:AB013815
EMBL:AF074602 EMBL:AF076155 EMBL:AF062924 EMBL:AY667247
EMBL:AY691904 EMBL:DQ372533 EMBL:DQ415923 EMBL:BT024594
IPI:IPI00534240 PIR:D85294 PIR:JE0297 PIR:T05799 PIR:T51830
RefSeq:NP_567720.1 UniGene:At.231 ProteinModelPortal:Q9M0L0
SMR:Q9M0L0 STRING:Q9M0L0 PRIDE:Q9M0L0 EnsemblPlants:AT4G25480.1
GeneID:828652 KEGG:ath:AT4G25480 GeneFarm:3593 TAIR:At4g25480
eggNOG:NOG303203 InParanoid:Q9M0L0 PhylomeDB:Q9M0L0
ProtClustDB:CLSN2687445 Genevestigator:Q9M0L0 GermOnline:AT4G25480
Uniprot:Q9M0L0
Length = 216
Score = 129 (50.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV + +G+W ++ E K R+WLGTF E AAR +D AAL RG++A NF S
Sbjct: 51 YRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADS 109
>TAIR|locus:2171529 [details] [associations]
symbol:ERF5 "ethylene responsive element binding factor
5" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0010200 "response
to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0003677
GO:GO:0009409 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 EMBL:AB018117
EMBL:AB008107 EMBL:AK117568 EMBL:AF385709 EMBL:AY078014
IPI:IPI00541991 PIR:T52020 RefSeq:NP_568679.1 UniGene:At.9512
ProteinModelPortal:O80341 SMR:O80341 STRING:O80341 PRIDE:O80341
EnsemblPlants:AT5G47230.1 GeneID:834770 KEGG:ath:AT5G47230
TAIR:At5g47230 eggNOG:NOG281949 HOGENOM:HOG000272710
InParanoid:O80341 OMA:TEWIQFA PhylomeDB:O80341
ProtClustDB:CLSN2689485 Genevestigator:O80341 GermOnline:AT5G47230
Uniprot:O80341
Length = 300
Score = 133 (51.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 21 IDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQR---VWLGTFIEEEEAARVYDTAALRF 77
+ E KK Y+GV +P G++ A+I + ++R VWLGTF EAAR YD AA R
Sbjct: 148 VSEEEKK----HYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRL 203
Query: 78 RGQNAITNF 86
RG AI NF
Sbjct: 204 RGSKAILNF 212
>TAIR|locus:2173009 [details] [associations]
symbol:AIL5 "AINTEGUMENTA-like 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0060771 "phyllotactic patterning" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=ISS;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009845
HOGENOM:HOG000239258 KO:K09285 EMBL:AY585685 EMBL:AB016891
IPI:IPI00518096 RefSeq:NP_200549.2 UniGene:At.29336
ProteinModelPortal:Q6PQQ3 SMR:Q6PQQ3 EnsemblPlants:AT5G57390.1
GeneID:835845 KEGG:ath:AT5G57390 GeneFarm:2582 TAIR:At5g57390
eggNOG:NOG258934 InParanoid:Q6PQQ3 OMA:WINNNIS PhylomeDB:Q6PQQ3
ProtClustDB:CLSN2681678 Genevestigator:Q6PQQ3 GO:GO:0060771
GO:GO:0040019 Uniprot:Q6PQQ3
Length = 558
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV +GRW A+I ++ ++LGTF +EEAA YD AA++FRG NA+TNF
Sbjct: 303 ASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF 362
Query: 87 RTS 89
S
Sbjct: 363 DIS 365
>TAIR|locus:2030265 [details] [associations]
symbol:AT1G72570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AY603417 EMBL:AC010926 EMBL:DQ446422 EMBL:DQ652930
IPI:IPI00529030 PIR:B96750 RefSeq:NP_177401.2 UniGene:At.50661
ProteinModelPortal:Q1PFE1 SMR:Q1PFE1 EnsemblPlants:AT1G72570.1
GeneID:843589 KEGG:ath:AT1G72570 TAIR:At1g72570 eggNOG:NOG295761
HOGENOM:HOG000239258 InParanoid:Q1PFE1 KO:K09285 OMA:TPPLRIC
PhylomeDB:Q1PFE1 ProtClustDB:CLSN2920249 Genevestigator:Q1PFE1
Uniprot:Q1PFE1
Length = 415
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV +GRW A+I ++ ++LGTF +EEAA YD AA++FRG NA+TNF
Sbjct: 323 ASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF 382
>TAIR|locus:2171514 [details] [associations]
symbol:ERF2 "ethylene responsive element binding factor
2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0009864 "induced systemic resistance,
jasmonic acid mediated signaling pathway" evidence=IMP] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0009693
"ethylene biosynthetic process" evidence=RCA] [GO:0009723 "response
to ethylene stimulus" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
EMBL:AB018117 HOGENOM:HOG000239314 EMBL:AB008104 EMBL:AK175151
EMBL:AK175229 EMBL:AK176532 EMBL:AK176606 EMBL:AK176825
EMBL:BT024470 EMBL:AY086983 IPI:IPI00521608 PIR:T51989
RefSeq:NP_199533.1 UniGene:At.19731 ProteinModelPortal:O80338
SMR:O80338 STRING:O80338 PRIDE:O80338 EnsemblPlants:AT5G47220.1
GeneID:834768 KEGG:ath:AT5G47220 TAIR:At5g47220 eggNOG:NOG285540
InParanoid:O80338 KO:K14517 OMA:TPSSCFT PhylomeDB:O80338
ProtClustDB:CLSN2914897 Genevestigator:O80338 GermOnline:AT5G47220
GO:GO:0009864 Uniprot:O80338
Length = 243
Score = 130 (50.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 18 ENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYDTAA 74
+ I + + Y+GV +P G++ A+I + + RVWLGTF E+AA YD AA
Sbjct: 102 KKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAA 161
Query: 75 LRFRGQNAITNFRTSLETDDED 96
R RG A+ NF + + + D
Sbjct: 162 FRMRGSRALLNFPLRVNSGEPD 183
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 133 (51.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 150 FGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFA---LSSEIASKGLLLNFE 206
FG + P EF F K LT SD +P++ AEK F S++ ++ L++
Sbjct: 145 FGMLRGSKHPTEF-FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVR-- 201
Query: 207 DSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWR 251
D + W R+ Y + ++LT GWS FV K ++AGD+V F R
Sbjct: 202 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246
Score = 50 (22.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 256 SNSKL-FIDCKLQQNGNGSGFEEM 278
S+S + F DC L+QN GS ++++
Sbjct: 764 SSSNVDFDDCSLRQNSKGSSWQKI 787
>TAIR|locus:2056048 [details] [associations]
symbol:SNZ "SCHNARCHZAPFEN" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PROSITE:PS51032
SMART:SM00380 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC004697 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000293136 ProtClustDB:CLSN2681587 EMBL:AY576276
EMBL:AY062578 EMBL:AY093386 IPI:IPI00534560 IPI:IPI00866782
PIR:T02577 RefSeq:NP_850313.2 UniGene:At.27296
ProteinModelPortal:Q6PV67 SMR:Q6PV67 IntAct:Q6PV67 PaxDb:Q6PV67
PRIDE:Q6PV67 EnsemblPlants:AT2G39250.1 GeneID:818510
KEGG:ath:AT2G39250 TAIR:At2g39250 eggNOG:NOG298400
InParanoid:Q6PV67 OMA:THNEDED PhylomeDB:Q6PV67
Genevestigator:Q6PV67 Uniprot:Q6PV67
Length = 325
Score = 133 (51.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 30 SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRT 88
SS Y+GV + GRW + I++ ++V+LG F AAR YD AA+RFRG A NF
Sbjct: 106 SSHYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIV 165
Query: 89 SLETDDEDDYMEKIFLSSHSKAEIVDMLRK 118
DD +EK + + SK E V LR+
Sbjct: 166 ----DDYKQDIEK--MKNLSKEEFVQSLRR 189
>TAIR|locus:2155680 [details] [associations]
symbol:AIL7 "AINTEGUMENTA-like 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0060771 "phyllotactic
patterning" evidence=IGI] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009887 "organ morphogenesis"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010492 HOGENOM:HOG000239258 KO:K09285 GO:GO:0060771
EMBL:AB026639 EMBL:AY560887 IPI:IPI00522908 RefSeq:NP_201354.5
UniGene:At.50720 ProteinModelPortal:Q6J9N8 SMR:Q6J9N8
EnsemblPlants:AT5G65510.1 GeneID:836677 KEGG:ath:AT5G65510
TAIR:At5g65510 eggNOG:NOG295896 InParanoid:Q6J9N8 OMA:HVVESST
Genevestigator:Q6J9N8 Uniprot:Q6J9N8
Length = 498
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV GRW A+I ++ ++LGTF EEEAA YD AA++FRG NA+TNF
Sbjct: 331 ASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNF 390
>TAIR|locus:2825842 [details] [associations]
symbol:RAP2.1 "related to AP2 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC083835 HOGENOM:HOG000237624 EMBL:BT024691
EMBL:AY086838 EMBL:Z27045 EMBL:AF003094 IPI:IPI00543804 PIR:H96511
RefSeq:NP_564496.1 UniGene:At.28676 ProteinModelPortal:Q8LC30
SMR:Q8LC30 PaxDb:Q8LC30 PRIDE:Q8LC30 EnsemblPlants:AT1G46768.1
GeneID:841117 KEGG:ath:AT1G46768 TAIR:At1g46768 eggNOG:NOG284485
InParanoid:Q8LC30 OMA:QEESTMR PhylomeDB:Q8LC30
ProtClustDB:CLSN2917164 Genevestigator:Q8LC30 Uniprot:Q8LC30
Length = 153
Score = 113 (44.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
Y+G+ + G+W A+I E K R+WLG++ + AAR YD A RG +A NF L
Sbjct: 31 YRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNF-PDL 89
Query: 91 ETDDED 96
+ED
Sbjct: 90 LLQEED 95
>TAIR|locus:2204730 [details] [associations]
symbol:AT1G77640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC010704 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560843 EMBL:BT012629 EMBL:AK176224
IPI:IPI00519885 PIR:A96806 RefSeq:NP_177887.1 UniGene:At.17793
ProteinModelPortal:Q9CAP4 SMR:Q9CAP4 PRIDE:Q9CAP4
EnsemblPlants:AT1G77640.1 GeneID:844099 KEGG:ath:AT1G77640
TAIR:At1g77640 eggNOG:NOG281332 InParanoid:Q9CAP4 OMA:FLMNIDE
PhylomeDB:Q9CAP4 Genevestigator:Q9CAP4 Uniprot:Q9CAP4
Length = 244
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 42/133 (31%), Positives = 58/133 (43%)
Query: 5 SSSVDLDHDHNLSENGIDA---ESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGT 59
+SS L H + S + A +S K KYKGV + G W +I +Q R+WLG+
Sbjct: 12 TSSSSLSHSSSSSSSSTSALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGS 71
Query: 60 FIEEEEAARVYDTAALRFRGQNAITNFRTSLETDDE-DDYMEKIFLSSHSKAEIVDMLRK 118
+ E AAR YD A L +G A NF T + EK LS S ++
Sbjct: 72 YSTAEAAARAYDAALLCLKGPKANLNFPNITTTSPFLMNIDEKTLLSPKSIQKVAAQAAN 131
Query: 119 HTYKHELEQSKQN 131
+ H S +N
Sbjct: 132 SSSDHFTPPSDEN 144
>TAIR|locus:2131834 [details] [associations]
symbol:CBF2 "C-repeat/DRE binding factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009631 "cold acclimation" evidence=IMP]
[GO:0009409 "response to cold" evidence=IEP;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009631
EMBL:AL022197 EMBL:AL161563 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247 ProtClustDB:CLSN2687445
HOGENOM:HOG000237624 EMBL:AB007789 EMBL:AB013817 EMBL:AF074601
EMBL:AF062925 EMBL:BT028991 IPI:IPI00525791 PIR:JE0299
RefSeq:NP_567719.1 UniGene:At.233 ProteinModelPortal:Q9SYS6
SMR:Q9SYS6 STRING:Q9SYS6 PRIDE:Q9SYS6 EnsemblPlants:AT4G25470.1
GeneID:828651 KEGG:ath:AT4G25470 GeneFarm:3597 TAIR:At4g25470
eggNOG:NOG298542 InParanoid:Q9SYS6 OMA:ESTCAKE PhylomeDB:Q9SYS6
Genevestigator:Q9SYS6 GermOnline:AT4G25470 Uniprot:Q9SYS6
Length = 216
Score = 127 (49.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV + +G+W ++ E K R+WLGTF E AAR +D AA+ RG++A NF S
Sbjct: 51 YRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADS 109
>TAIR|locus:2171840 [details] [associations]
symbol:AT5G65130 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB013395 HOGENOM:HOG000239817
EMBL:AY560858 EMBL:DQ447109 EMBL:DQ653392 EMBL:BT025723
IPI:IPI00516764 RefSeq:NP_201318.1 UniGene:At.50719
ProteinModelPortal:Q9FJQ2 SMR:Q9FJQ2 IntAct:Q9FJQ2 PaxDb:Q9FJQ2
PRIDE:Q9FJQ2 EnsemblPlants:AT5G65130.1 GeneID:836637
KEGG:ath:AT5G65130 TAIR:At5g65130 eggNOG:NOG331618
InParanoid:Q9FJQ2 OMA:ILQIQTE PhylomeDB:Q9FJQ2
ProtClustDB:CLSN2916268 Genevestigator:Q9FJQ2 Uniprot:Q9FJQ2
Length = 277
Score = 130 (50.8 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 41/141 (29%), Positives = 63/141 (44%)
Query: 21 IDAESKKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFR 78
ID +K P Y+GV + G+W A+I + R+WLGTF +EAA YD AA + R
Sbjct: 101 IDVATK--PVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIR 158
Query: 79 GQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHELEQSKQNYACVGIS 138
G NA NF + + Y + + S ++K E + +Q+K G S
Sbjct: 159 GDNARLNFPDIVR---QGHYKQILSPSINAKIESICNSSDLPLPQIEKQNKTEEVLSGFS 215
Query: 139 CYNNSSGFSDLFGSNCFQETP 159
F +++G +P
Sbjct: 216 KPEKEPEFGEIYGCGYSGSSP 236
>TAIR|locus:2044845 [details] [associations]
symbol:HRD "HARDY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC006919 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560867 EMBL:DQ446604
EMBL:DQ653045 IPI:IPI00534962 PIR:H84780 RefSeq:NP_181186.1
UniGene:At.64963 ProteinModelPortal:Q9SJR0 SMR:Q9SJR0
EnsemblPlants:AT2G36450.1 GeneID:818219 KEGG:ath:AT2G36450
TAIR:At2g36450 eggNOG:NOG251289 InParanoid:Q9SJR0 OMA:REPRKPN
PhylomeDB:Q9SJR0 ProtClustDB:CLSN2716339 Genevestigator:Q9SJR0
Uniprot:Q9SJR0
Length = 184
Score = 123 (48.4 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 40/122 (32%), Positives = 53/122 (43%)
Query: 33 YKGVVPQPNG-RWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV + N +W ++I E K R+WLGTF E AA YD AAL +G A NF S
Sbjct: 15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNS 74
Query: 90 LETDDEDDYMEK--IFLSSHSKAEIVDMLRKHTYKHELEQSKQNYACVGISCYN-NSSGF 146
+ + M I ++ S A R AC+ S N N +GF
Sbjct: 75 VSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTNMNGF 134
Query: 147 SD 148
D
Sbjct: 135 MD 136
>TAIR|locus:2155498 [details] [associations]
symbol:DEAR2 "DREB and EAR motif protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB020742 HOGENOM:HOG000237624
EMBL:AY560860 EMBL:DQ447114 EMBL:DQ653394 EMBL:BT025744
IPI:IPI00524496 RefSeq:NP_201520.1 UniGene:At.50633
ProteinModelPortal:Q9FH94 SMR:Q9FH94 EnsemblPlants:AT5G67190.1
GeneID:836854 KEGG:ath:AT5G67190 TAIR:At5g67190 eggNOG:NOG289312
InParanoid:Q9FH94 OMA:DEEWESK PhylomeDB:Q9FH94
ProtClustDB:CLSN2914757 Genevestigator:Q9FH94 Uniprot:Q9FH94
Length = 184
Score = 123 (48.4 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 30/69 (43%), Positives = 38/69 (55%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
YKG+ + G+W A+I E K R+WLG++ E AAR YDTA RG A NF L
Sbjct: 21 YKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELL 80
Query: 91 ETD---DED 96
+ DED
Sbjct: 81 PGEKFSDED 89
>TAIR|locus:2115005 [details] [associations]
symbol:RAP2.10 "related to AP2 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:Z99707 EMBL:AL161590
HOGENOM:HOG000237624 ProtClustDB:CLSN2683886 EMBL:AF003103
EMBL:AJ002598 EMBL:AY057683 EMBL:BT020317 EMBL:BT020302
EMBL:BT025757 IPI:IPI00532035 PIR:G85435 PIR:T52619
RefSeq:NP_195408.1 UniGene:At.461 ProteinModelPortal:Q9SW63
SMR:Q9SW63 EnsemblPlants:AT4G36900.1 GeneID:829843
KEGG:ath:AT4G36900 TAIR:At4g36900 eggNOG:NOG321299
InParanoid:Q9SW63 OMA:ECSSKEG PhylomeDB:Q9SW63
Genevestigator:Q9SW63 Uniprot:Q9SW63
Length = 196
Score = 124 (48.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
YKG+ + G+W A+I E K R+WLG++ E AAR YDTA RG +A NF
Sbjct: 30 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNF 85
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 133 (51.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 147 SDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGL-LLNF 205
S+ F SN ++TP F K LT SD +P+ AE F A + +
Sbjct: 107 SNGFESNS-EKTPS---FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILA 162
Query: 206 EDSTQKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCK 265
+D VW+ R+ Y + + ++LT GWS FV +K + AGD++ F R+ N L + +
Sbjct: 163 KDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAE---NGDLCVGIR 219
Query: 266 LQQNGN-GSGFEEMQSQVPNIGVVRLFGVNILEDPNN 301
+ G G+G E P IG + + ED +N
Sbjct: 220 RAKRGGIGNGPEYSAGWNP-IGGSCGYSSLLREDESN 255
Score = 44 (20.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 10 LDHDHNLSE--NGIDAESKKLPS 30
+DH++ E NG ++ S+K PS
Sbjct: 97 VDHEYGDGEDSNGFESNSEKTPS 119
>TAIR|locus:2137559 [details] [associations]
symbol:ANT "AINTEGUMENTA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0042127 "regulation of
cell proliferation" evidence=RCA;IMP] [GO:0010492 "maintenance of
shoot apical meristem identity" evidence=IGI] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=IMP;RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709 EMBL:AL161592
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0042127
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009908 GO:GO:0010492
HOGENOM:HOG000239258 KO:K09285 EMBL:U40256 EMBL:U41339 EMBL:U44028
EMBL:AR316367 EMBL:AY080706 EMBL:AY117207 IPI:IPI00532315
PIR:S71365 RefSeq:NP_195489.1 UniGene:At.1556
ProteinModelPortal:Q38914 SMR:Q38914 STRING:Q38914 PaxDb:Q38914
PRIDE:Q38914 EnsemblPlants:AT4G37750.1 GeneID:829931
KEGG:ath:AT4G37750 GeneFarm:5116 TAIR:At4g37750 eggNOG:NOG313785
InParanoid:Q38914 OMA:NTTHEPN PhylomeDB:Q38914
ProtClustDB:CLSN2916050 Genevestigator:Q38914 GermOnline:AT4G37750
Uniprot:Q38914
Length = 555
Score = 134 (52.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV +GRW A+I ++ ++LGTF +EEAA YD AA++FRG NA+TNF
Sbjct: 383 ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNF 442
>TAIR|locus:2094897 [details] [associations]
symbol:AT3G16280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB023046
EMBL:AC001645 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
HOGENOM:HOG000237624 EMBL:AY995152 EMBL:AY560846 IPI:IPI00539623
RefSeq:NP_188249.3 UniGene:At.50189 ProteinModelPortal:Q9LU18
SMR:Q9LU18 EnsemblPlants:AT3G16280.1 GeneID:820874
KEGG:ath:AT3G16280 GeneFarm:2905 TAIR:At3g16280 eggNOG:NOG281093
InParanoid:Q9LU18 OMA:LPNIEEG ProtClustDB:CLSN2918820
Genevestigator:Q9LU18 Uniprot:Q9LU18
Length = 236
Score = 127 (49.8 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 23 AESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQ 80
+ S + Y+GV + G+W ++I + K R+WLGTF+ + AAR +D AAL +G
Sbjct: 51 SSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGS 110
Query: 81 NAITNF 86
+A+ NF
Sbjct: 111 SAVLNF 116
>TAIR|locus:2182993 [details] [associations]
symbol:PUCHI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009908 "flower development" evidence=IMP]
[GO:0010102 "lateral root morphogenesis" evidence=IMP] [GO:0010432
"bract development" evidence=IGI;IMP] [GO:0010451 "floral meristem
growth" evidence=IMP] [GO:0010582 "floral meristem determinacy"
evidence=IGI;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0010582 EMBL:AC069328
EMBL:AY560873 IPI:IPI00532675 RefSeq:NP_197357.2 UniGene:At.49752
ProteinModelPortal:Q6J9Q2 SMR:Q6J9Q2 STRING:Q6J9Q2
EnsemblPlants:AT5G18560.1 GeneID:831974 KEGG:ath:AT5G18560
GeneFarm:2221 TAIR:At5g18560 eggNOG:NOG237521 HOGENOM:HOG000176627
InParanoid:Q6J9Q2 OMA:SAMITNY Genevestigator:Q6J9Q2 GO:GO:0010432
GO:GO:0010451 GO:GO:0010102 Uniprot:Q6J9Q2
Length = 348
Score = 122 (48.0 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 25 SKKLPSSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNA 82
SK+ ++ GV +P GR+ A+I + +R WLGTF EAA YD AAL RG A
Sbjct: 47 SKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQA 106
Query: 83 ITNF 86
TNF
Sbjct: 107 RTNF 110
Score = 41 (19.5 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 80 QNAITNFRTSLETDDEDDYMEKIFLSSHSKA 110
QN+ +N S D+E+++ + H+K+
Sbjct: 198 QNSSSNGSLSSSLDEENNFFFSLTSEEHNKS 228
Score = 39 (18.8 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 15/70 (21%), Positives = 28/70 (40%)
Query: 141 NNSSGFSDLFGSN-CFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASK 199
NN+SG+ D N C + P E T + G + + +E + S+
Sbjct: 229 NNNSGYLDCIVPNHCLKPPP-----EATTTQNQAGASFTTPVASKASEPYGGFSNSYFED 283
Query: 200 G--LLLNFED 207
G +++N +
Sbjct: 284 GEMMMMNHHE 293
>TAIR|locus:2151591 [details] [associations]
symbol:ERF104 "ethylene response factor 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710 EMBL:AF360149
EMBL:AY054228 EMBL:AY142636 EMBL:AY088694 IPI:IPI00525572
RefSeq:NP_200968.1 UniGene:At.47568 ProteinModelPortal:Q9FKG1
SMR:Q9FKG1 DIP:DIP-48849N IntAct:Q9FKG1 STRING:Q9FKG1
EnsemblPlants:AT5G61600.1 GeneID:836281 KEGG:ath:AT5G61600
TAIR:At5g61600 eggNOG:NOG328203 InParanoid:Q9FKG1 OMA:EEERHYR
PhylomeDB:Q9FKG1 ProtClustDB:CLSN2916553 Genevestigator:Q9FKG1
Uniprot:Q9FKG1
Length = 241
Score = 127 (49.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 15 NLS-ENGIDAESKKLPSSK-YKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARV 69
NLS + +++K + Y+GV +P G++ A+I + ++ R+WLGT+ EA R
Sbjct: 68 NLSVSRTVSTKTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRA 127
Query: 70 YDTAALRFRGQNAITNFRTSLETDDE 95
YD AA + RG+ AI NF + E
Sbjct: 128 YDQAAFQLRGRKAILNFPLDVRVTSE 153
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 37/116 (31%), Positives = 57/116 (49%)
Query: 164 FEKVLTPSDVGKLNRMVIPKQQAEKHFALSS-EIASKGLLLNFEDSTQKVWRLRYCYWSS 222
F K+LTPSD +P+ A+ F L + +I L D VW R+ Y +
Sbjct: 119 FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGT 178
Query: 223 SQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCK---LQQNGNGSGF 275
+ ++LT GWS+FV K + AGD+V F R S ++FI + + + GS +
Sbjct: 179 PRRHLLTTGWSKFVNSKKLIAGDSVVFMRK---SADEMFIGVRRTPISSSDGGSSY 231
>TAIR|locus:2043495 [details] [associations]
symbol:ESE2 "ethylene and salt inducible 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC005395 HOGENOM:HOG000237624 EMBL:AY974198
EMBL:AY600555 EMBL:AF370341 EMBL:AY063000 EMBL:AY560870
EMBL:AY924749 IPI:IPI00533727 PIR:B84653 RefSeq:NP_565609.3
UniGene:At.13046 ProteinModelPortal:Q52QU1 SMR:Q52QU1
EnsemblPlants:AT2G25820.1 GeneID:817124 KEGG:ath:AT2G25820
TAIR:At2g25820 eggNOG:NOG262348 OMA:FPELADF PhylomeDB:Q52QU1
ProtClustDB:CLSN2685437 Genevestigator:Q52QU1 Uniprot:Q52QU1
Length = 225
Score = 126 (49.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 33/80 (41%), Positives = 43/80 (53%)
Query: 16 LSENGIDAE---SKKLPSSKYKGVVPQPN----GRWGAQIYE--KHQRVWLGTFIEEEEA 66
+ +G D E KK +K KGV G+W ++I E K R+WLGTF E A
Sbjct: 2 VDSHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMA 61
Query: 67 ARVYDTAALRFRGQNAITNF 86
AR +D AAL +G +AI NF
Sbjct: 62 ARAHDVAALSIKGSSAILNF 81
>TAIR|locus:2129106 [details] [associations]
symbol:ERF6 "AT4G17490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA;TAS] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0000302 "response to reactive oxygen species"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009644 "response to high light intensity" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343 EMBL:AL161546
HOGENOM:HOG000272710 ProtClustDB:CLSN2689485 EMBL:AB008316
EMBL:AB013301 EMBL:AY065155 EMBL:AY114588 IPI:IPI00547267
PIR:E71444 PIR:T52189 RefSeq:NP_567529.1 UniGene:At.24407
UniGene:At.71513 ProteinModelPortal:Q8VZ91 SMR:Q8VZ91 STRING:Q8VZ91
PaxDb:Q8VZ91 PRIDE:Q8VZ91 EnsemblPlants:AT4G17490.1 GeneID:827463
KEGG:ath:AT4G17490 GeneFarm:4729 TAIR:At4g17490 eggNOG:NOG274811
InParanoid:Q8VZ91 OMA:KWIQFAT PhylomeDB:Q8VZ91
Genevestigator:Q8VZ91 GermOnline:AT4G17490 Uniprot:Q8VZ91
Length = 282
Score = 128 (50.1 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 34/76 (44%), Positives = 43/76 (56%)
Query: 21 IDAESKKLPSSKYKGVVPQPNGRWGAQIYE---KHQRVWLGTFIEEEEAARVYDTAALRF 77
+ AE K+ Y+GV +P G++ A+I + + RVWLGTF EAAR YD A R
Sbjct: 129 VAAEEKR----HYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRL 184
Query: 78 RGQNAITNFRTSLETD 93
RG AI NF LE D
Sbjct: 185 RGSKAILNF--PLEVD 198
>TAIR|locus:2015061 [details] [associations]
symbol:AT1G22190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009409
"response to cold" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0009409 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000239817 EMBL:AC073942 EMBL:BT000907
IPI:IPI00529569 PIR:E86354 RefSeq:NP_173638.1 UniGene:At.25524
UniGene:At.26676 UniGene:At.70046 ProteinModelPortal:Q9LM15
SMR:Q9LM15 MINT:MINT-7262777 STRING:Q9LM15 PaxDb:Q9LM15
PRIDE:Q9LM15 EnsemblPlants:AT1G22190.1 GeneID:838824
KEGG:ath:AT1G22190 TAIR:At1g22190 eggNOG:NOG261785
InParanoid:Q9LM15 OMA:QAICATI PhylomeDB:Q9LM15
ProtClustDB:CLSN2914396 Genevestigator:Q9LM15 Uniprot:Q9LM15
Length = 261
Score = 127 (49.8 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 14 HNLSENGIDAE----SKKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAA 67
H+LS + + S P+ Y+GV + G+W A+I R+WLGTF EEAA
Sbjct: 60 HHLSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAA 119
Query: 68 RVYDTAALRFRGQNAITNFRTSLETDDEDDYMEKIFLSSHSKAEIVDMLRKHTYKHELEQ 127
YD AA + RG A NF L +DE ++ S +K E + T + ++
Sbjct: 120 LAYDKAAYKLRGDFARLNF-PDLRHNDEYQPLQS---SVDAKLEAICQNLAETTQKQVRS 175
Query: 128 SKQN 131
+K++
Sbjct: 176 TKKS 179
>TAIR|locus:2031890 [details] [associations]
symbol:ESR1 "ENHANCER OF SHOOT REGENERATION 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0010084 "specification of organ
axis polarity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005634 GO:GO:0009735 GO:GO:0009734 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 EMBL:AC007357
GO:GO:0009880 GO:GO:0048825 GO:GO:0010084 EMBL:AF353577
IPI:IPI00546326 PIR:G86263 RefSeq:NP_172758.1 UniGene:At.28308
ProteinModelPortal:Q9SAD4 SMR:Q9SAD4 IntAct:Q9SAD4 STRING:Q9SAD4
EnsemblPlants:AT1G12980.1 GeneID:837856 KEGG:ath:AT1G12980
TAIR:At1g12980 eggNOG:NOG305471 HOGENOM:HOG000112399
InParanoid:Q9SAD4 OMA:CAYDSAA ProtClustDB:CLSN2914228
Genevestigator:Q9SAD4 Uniprot:Q9SAD4
Length = 328
Score = 129 (50.5 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 30 SSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+++Y+GV +P GR+ A+I + +R WLGTF E+AA YD+AA FRG A TNF
Sbjct: 54 TTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNF 112
>TAIR|locus:2082732 [details] [associations]
symbol:SMZ "SCHLAFMUTZE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009658
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AY576275 EMBL:AY560886
EMBL:BT026352 IPI:IPI00547287 IPI:IPI00846149 PIR:T06721
RefSeq:NP_001078290.1 RefSeq:NP_191059.2 UniGene:At.50279
ProteinModelPortal:Q6PV68 SMR:Q6PV68 STRING:Q6PV68
EnsemblPlants:AT3G54990.1 GeneID:824664 KEGG:ath:AT3G54990
TAIR:At3g54990 eggNOG:NOG270704 HOGENOM:HOG000293136
InParanoid:Q6PV68 OMA:DADINFV PhylomeDB:Q6PV68
ProtClustDB:CLSN2681587 ArrayExpress:Q6PV68 Genevestigator:Q6PV68
Uniprot:Q6PV68
Length = 346
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 30 SSKYKGVV-PQPNGRWGAQIYEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRT 88
SS+Y+GV + GRW + I++ ++V+LG F AAR YD AA++FRG +A NF
Sbjct: 120 SSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVV 179
Query: 89 SLETDDEDDYMEKIF-LSSHSKAEIVDMLRKHT 120
DDY I + + +K E V LR+ +
Sbjct: 180 -------DDYRHDIDKMKNLNKVEFVQTLRRES 205
>TAIR|locus:2034295 [details] [associations]
symbol:AT1G36060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006228 EMBL:AC021666
EMBL:BT005758 EMBL:BT006078 EMBL:AK228415 IPI:IPI00549083
PIR:E86482 RefSeq:NP_564468.1 UniGene:At.39425
ProteinModelPortal:Q9SKW5 SMR:Q9SKW5 STRING:Q9SKW5
EnsemblPlants:AT1G36060.1 GeneID:840510 KEGG:ath:AT1G36060
TAIR:At1g36060 eggNOG:NOG329700 HOGENOM:HOG000239817
InParanoid:Q9SKW5 OMA:YKSASTS PhylomeDB:Q9SKW5
ProtClustDB:CLSN2914986 Genevestigator:Q9SKW5 Uniprot:Q9SKW5
Length = 314
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 16 LSENGIDAESKKLPSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTA 73
+++ G + S P+ Y+GV + G+W A+I R+WLGTF EEAA YD A
Sbjct: 126 MTQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRA 185
Query: 74 ALRFRGQNAITNF 86
A + RG +A NF
Sbjct: 186 AFKLRGDSARLNF 198
>TAIR|locus:2144296 [details] [associations]
symbol:TINY2 "AT5G11590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009873
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AL163815 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY940160 EMBL:AY560851 IPI:IPI00526417 PIR:T48518
RefSeq:NP_196720.1 UniGene:At.50619 ProteinModelPortal:Q9LYD3
SMR:Q9LYD3 EnsemblPlants:AT5G11590.1 GeneID:831031
KEGG:ath:AT5G11590 TAIR:At5g11590 eggNOG:NOG295419
InParanoid:Q9LYD3 OMA:SSEDNYG PhylomeDB:Q9LYD3
ProtClustDB:CLSN2686631 Genevestigator:Q9LYD3 Uniprot:Q9LYD3
Length = 236
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/91 (38%), Positives = 47/91 (51%)
Query: 1 MASNSSSVDLDHDHNLSENGIDAESKKLPSSK---YKGVVPQPNGRWGAQIYE--KHQRV 55
+ NS S D D + +E + S K Y+GV + G+W ++I E K R+
Sbjct: 17 LVPNSES-DSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRI 75
Query: 56 WLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
WLGTF E AAR +D AAL +G AI NF
Sbjct: 76 WLGTFPTPEMAARAHDVAALSIKGTAAILNF 106
>TAIR|locus:2134128 [details] [associations]
symbol:AT4G32800 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL161582 HOGENOM:HOG000237624
ProtClustDB:CLSN2685437 EMBL:BT002924 EMBL:BT004343 EMBL:AY088918
IPI:IPI00548529 PIR:T10687 RefSeq:NP_195006.1 UniGene:At.31634
ProteinModelPortal:Q9M080 SMR:Q9M080 EnsemblPlants:AT4G32800.1
GeneID:829416 KEGG:ath:AT4G32800 TAIR:At4g32800 eggNOG:NOG307860
InParanoid:Q9M080 OMA:EMAMRAH PhylomeDB:Q9M080
Genevestigator:Q9M080 Uniprot:Q9M080
Length = 221
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 16 LSENGIDAESKKLPSSK-YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDT 72
++++ D E K+ Y+GV + G+W ++I E K R+WLGTF E A R +D
Sbjct: 1 MADSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDV 60
Query: 73 AALRFRGQNAITNF 86
AA+ +G +AI NF
Sbjct: 61 AAMSIKGTSAILNF 74
>UNIPROTKB|Q5MFV1 [details] [associations]
symbol:BIERF3 "BTH-induced ERF transcriptional factor 3"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IC] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831394
ProteinModelPortal:Q5MFV1 KEGG:dosa:Os02t0654700-01 Gramene:Q5MFV1
Uniprot:Q5MFV1
Length = 303
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 33 YKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
Y+GV +P G++ A+I + + RVWLGTF EEAA YD AA R RG A+ NF
Sbjct: 149 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGSRALLNF 205
>TAIR|locus:2076621 [details] [associations]
symbol:AT3G57600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048440 "carpel development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL049660
EMBL:AY087243 EMBL:AK227217 EMBL:BT028945 IPI:IPI00530394
PIR:T06760 RefSeq:NP_191319.1 UniGene:At.34819
ProteinModelPortal:Q9SVX5 SMR:Q9SVX5 EnsemblPlants:AT3G57600.1
GeneID:824929 KEGG:ath:AT3G57600 GeneFarm:3672 TAIR:At3g57600
eggNOG:NOG289602 HOGENOM:HOG000239781 InParanoid:Q9SVX5 OMA:ARLWLGS
PhylomeDB:Q9SVX5 ProtClustDB:CLSN2684573 Genevestigator:Q9SVX5
GermOnline:AT3G57600 Uniprot:Q9SVX5
Length = 277
Score = 125 (49.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF--- 86
+Y+GV + G+W A+I E K R+WLG+F EEAA YD AAL+ G +A N
Sbjct: 27 QYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHL 86
Query: 87 ----RTSLETDDEDDYM-EKIFLSSHSKAEIVDMLRKHTYKHELEQSKQNYACVGISCYN 141
R SL ++ + F+S ++++ + + H ++Q + G+ +
Sbjct: 87 QRNTRPSLSNSQRFKWVPSRKFISMFPSCGMLNVNAQPSV-HIIQQRLEELKKTGLLSQS 145
Query: 142 NSSGFSDLFGSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGL 201
SS S+ +T FL EK + G+ + M Q + L+ + G+
Sbjct: 146 YSSS-----SSSTESKTNTSFLDEK----TSKGETDNMFEGGDQKKPEIDLTEFLQQLGI 196
Query: 202 L 202
L
Sbjct: 197 L 197
>TAIR|locus:2103301 [details] [associations]
symbol:AT3G60490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL138646 HOGENOM:HOG000237624
EMBL:AY560848 EMBL:BT029458 IPI:IPI00540804 PIR:T47860
RefSeq:NP_191608.1 UniGene:At.34438 ProteinModelPortal:Q9M210
SMR:Q9M210 EnsemblPlants:AT3G60490.1 GeneID:825220
KEGG:ath:AT3G60490 GeneFarm:2902 TAIR:At3g60490 eggNOG:NOG305121
InParanoid:Q9M210 OMA:ESSATHH PhylomeDB:Q9M210
ProtClustDB:CLSN2915626 Genevestigator:Q9M210 Uniprot:Q9M210
Length = 256
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 23 AESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQ 80
++ K P+S Y+GV + G+W ++I E K R+WLGT+ E AAR +D AAL +G
Sbjct: 62 SDDNKNPTS-YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGN 120
Query: 81 NAITNF 86
+ NF
Sbjct: 121 SGFLNF 126
>TAIR|locus:2058764 [details] [associations]
symbol:ERF38 "ERF family protein 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0009834 "secondary cell wall
biogenesis" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006068 GO:GO:0009834
HOGENOM:HOG000237624 EMBL:AY560845 EMBL:DQ446600 EMBL:DQ653042
EMBL:BT025754 IPI:IPI00524895 PIR:H84771 RefSeq:NP_181113.1
UniGene:At.50671 ProteinModelPortal:Q9ZQP3 SMR:Q9ZQP3
EnsemblPlants:AT2G35700.1 GeneID:818139 KEGG:ath:AT2G35700
TAIR:At2g35700 eggNOG:NOG276561 InParanoid:Q9ZQP3 OMA:MDVETSS
PhylomeDB:Q9ZQP3 ProtClustDB:CLSN2683800 Genevestigator:Q9ZQP3
Uniprot:Q9ZQP3
Length = 194
Score = 119 (46.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 22 DAESKKLPSS--KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRF 77
D + +K+ S ++GV + G+W ++I E K R+WLGTF E AAR +D AAL
Sbjct: 32 DDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAI 91
Query: 78 RGQNAITNF 86
+G +A NF
Sbjct: 92 KGGSAHLNF 100
>TAIR|locus:2202200 [details] [associations]
symbol:AT1G19210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC069143 HOGENOM:HOG000237624 EMBL:AF332422
EMBL:BT006191 IPI:IPI00523703 PIR:F86325 RefSeq:NP_173355.3
UniGene:At.17044 ProteinModelPortal:Q84QC2 SMR:Q84QC2
EnsemblPlants:AT1G19210.1 GeneID:838504 KEGG:ath:AT1G19210
TAIR:At1g19210 eggNOG:NOG276412 InParanoid:Q84QC2 OMA:YEIRQES
PhylomeDB:Q84QC2 ProtClustDB:CLSN2918479 Genevestigator:Q84QC2
Uniprot:Q84QC2
Length = 185
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 31 SKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
SKYKGV + G+W ++I +R+WLG++ E+AAR +D A RG NA NF
Sbjct: 10 SKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNF 67
>TAIR|locus:2014185 [details] [associations]
symbol:AT1G64380 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AY560876 EMBL:AC066689 EMBL:AK228763 IPI:IPI00537541
PIR:H96667 RefSeq:NP_176620.1 UniGene:At.36008 UniGene:At.67835
ProteinModelPortal:Q9C7W2 SMR:Q9C7W2 EnsemblPlants:AT1G64380.1
GeneID:842745 KEGG:ath:AT1G64380 TAIR:At1g64380 eggNOG:NOG272521
HOGENOM:HOG000241606 InParanoid:Q9C7W2 OMA:CPLERMP PhylomeDB:Q9C7W2
ProtClustDB:CLSN2679299 Genevestigator:Q9C7W2 Uniprot:Q9C7W2
Length = 335
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 33 YKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
Y+GV + G+W A+I + RVWLGT+ E AA YD AA + RG+ A NF +L
Sbjct: 136 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNF-PNL 194
Query: 91 ETDDE----DDYMEKIFLSS--HSKAE-IVDMLRKHTYKHELEQSKQNYACVGISCYNN 142
+ E D + I L + K + I +RK K ++ SK + A SC ++
Sbjct: 195 KDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADSSCLSS 253
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/106 (29%), Positives = 61/106 (57%)
Query: 163 LFEKVLTPSDVGKLNRMVIPKQQAEKHFA-LSSEIASKGLLLNFEDSTQKVWRLRYCYWS 221
+ +K L SDV +L R+V+PK++AE + L+S+ K L ++ + Q +W +Y YW
Sbjct: 180 ILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDLQNAQ-LWTFKYRYWP 238
Query: 222 SSQS--YVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCK 265
+++S YVL + +V+ ++ GD++ ++ + N++ I K
Sbjct: 239 NNKSRMYVL-ENTGDYVRTHDLQLGDSIVIYKDD--ENNRFVIGAK 281
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 35/106 (33%), Positives = 51/106 (48%)
Query: 151 GSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFA-LSSEIASKGLLLNFEDST 209
GS+ + TP +F K LT SD +P++ AE FA L + L +D
Sbjct: 166 GSSSVKRTP--HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLH 223
Query: 210 QKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVG 255
W+ R+ Y + ++LT GWS FV +K + +GD V F R G
Sbjct: 224 GVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGG 269
>TAIR|locus:2178915 [details] [associations]
symbol:BBM "BABY BOOM" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009887 "organ
morphogenesis" evidence=ISS;IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL391142
HOGENOM:HOG000239258 KO:K09285 EMBL:AF317907 EMBL:AY585684
IPI:IPI00523422 PIR:T51580 RefSeq:NP_197245.2 UniGene:At.50710
ProteinModelPortal:Q6PQQ4 SMR:Q6PQQ4 STRING:Q6PQQ4
EnsemblPlants:AT5G17430.1 GeneID:831609 KEGG:ath:AT5G17430
TAIR:At5g17430 eggNOG:NOG311645 InParanoid:Q6PQQ4 OMA:EIAYNAR
PhylomeDB:Q6PQQ4 ProtClustDB:CLSN2925597 ArrayExpress:Q6PQQ4
Genevestigator:Q6PQQ4 GermOnline:AT5G17430 Uniprot:Q6PQQ4
Length = 584
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 30 SSKYKGVVPQ-PNGRWGAQI--YEKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+S Y+GV +GRW A+I ++ ++LGTF +EEAA YD AA++FRG +A+TNF
Sbjct: 310 ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNF 369
>TAIR|locus:2055007 [details] [associations]
symbol:AT2G44940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002388 HOGENOM:HOG000237624
EMBL:BT008564 EMBL:BT008677 EMBL:AK229616 EMBL:AY087052
IPI:IPI00533012 PIR:T00399 RefSeq:NP_182021.1 UniGene:At.14592
ProteinModelPortal:Q8LBQ7 SMR:Q8LBQ7 EnsemblPlants:AT2G44940.1
GeneID:819103 KEGG:ath:AT2G44940 GeneFarm:2901 TAIR:At2g44940
eggNOG:NOG294541 InParanoid:Q8LBQ7 OMA:DENEMMI PhylomeDB:Q8LBQ7
ProtClustDB:CLSN2913029 Genevestigator:Q8LBQ7 Uniprot:Q8LBQ7
Length = 295
Score = 122 (48.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 3 SNSSSVDLDHDHNLSENGIDAESKKLPSSK----YKGVVPQPNGRWGAQIYE--KHQRVW 56
S SS V ++ D + +NG + +K Y+GV + G+W ++I E K R+W
Sbjct: 68 SLSSLVSVEDDDD--QNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIW 125
Query: 57 LGTFIEEEEAARVYDTAALRFRGQNAITNF 86
LGT+ E AAR +D AAL +G A NF
Sbjct: 126 LGTYPTAEMAARAHDVAALAIKGTTAYLNF 155
>TAIR|locus:2129111 [details] [associations]
symbol:AT4G16750 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:Z97341 EMBL:AL161544 HOGENOM:HOG000237624
ProtClustDB:CLSN2683800 EMBL:AY560874 EMBL:BT011576 EMBL:BT020592
IPI:IPI00533818 PIR:F85186 RefSeq:NP_193408.1 UniGene:At.33050
ProteinModelPortal:Q9SUK8 SMR:Q9SUK8 EnsemblPlants:AT4G16750.1
GeneID:827379 KEGG:ath:AT4G16750 TAIR:At4g16750 eggNOG:NOG310275
InParanoid:Q9SUK8 OMA:MQDSSSH PhylomeDB:Q9SUK8
Genevestigator:Q9SUK8 Uniprot:Q9SUK8
Length = 179
Score = 115 (45.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
++GV + G+W ++I E K R+WLGTF E AAR +D AAL +G +A NF
Sbjct: 40 FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNF 95
>TAIR|locus:2010529 [details] [associations]
symbol:AT1G28160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC069471 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC021044 EMBL:AY560863
EMBL:DQ446295 EMBL:DQ652864 IPI:IPI00523290 PIR:E86407
RefSeq:NP_174138.1 UniGene:At.50650 ProteinModelPortal:Q9FZ90
SMR:Q9FZ90 EnsemblPlants:AT1G28160.1 GeneID:839710
KEGG:ath:AT1G28160 TAIR:At1g28160 eggNOG:NOG323238
HOGENOM:HOG000239107 InParanoid:Q9FZ90 OMA:TTKERYW PhylomeDB:Q9FZ90
ProtClustDB:CLSN2914663 Genevestigator:Q9FZ90 Uniprot:Q9FZ90
Length = 245
Score = 120 (47.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 29/57 (50%), Positives = 33/57 (57%)
Query: 32 KYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
KY GV +P GR+ A+I +R WLGTF EEAA YD AA RG A TNF
Sbjct: 38 KYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARSIRGLTARTNF 94
>TAIR|locus:2015168 [details] [associations]
symbol:ddf2 "DWARF AND DELAYED FLOWERING 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010371 "regulation of gibberellin biosynthetic
process" evidence=IMP] [GO:0016049 "cell growth" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
EMBL:AC011000 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048510
GO:GO:0010371 HOGENOM:HOG000237624 EMBL:AY560841 EMBL:AC010795
EMBL:AK175951 EMBL:BT021917 EMBL:BT025742 IPI:IPI00522795
PIR:E96655 RefSeq:NP_001077764.1 RefSeq:NP_176491.1
UniGene:At.49508 ProteinModelPortal:Q9SGJ6 SMR:Q9SGJ6 STRING:Q9SGJ6
EnsemblPlants:AT1G63030.1 EnsemblPlants:AT1G63030.2 GeneID:842606
KEGG:ath:AT1G63030 GeneFarm:3602 TAIR:At1g63030 eggNOG:NOG293635
InParanoid:Q9SGJ6 OMA:MENDDIT PhylomeDB:Q9SGJ6
ProtClustDB:CLSN2682371 Genevestigator:Q9SGJ6 GermOnline:AT1G63030
Uniprot:Q9SGJ6
Length = 181
Score = 115 (45.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 33 YKGVVPQPNGRWGAQIYEK-HQR-VWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+GV + +W ++ E HQR VWLGT+ + AAR +D A L RG++A NF S
Sbjct: 30 YRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNFSDS 88
>TAIR|locus:2060385 [details] [associations]
symbol:AT2G22200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC007168 HOGENOM:HOG000239817
EMBL:AY090378 EMBL:AY143836 IPI:IPI00527119 PIR:B84610
RefSeq:NP_179810.1 UniGene:At.39467 ProteinModelPortal:Q9SIE4
SMR:Q9SIE4 EnsemblPlants:AT2G22200.1 GeneID:816754
KEGG:ath:AT2G22200 TAIR:At2g22200 eggNOG:euNOG21323
InParanoid:Q9SIE4 OMA:EFEEIGS PhylomeDB:Q9SIE4
ProtClustDB:CLSN2683732 Genevestigator:Q9SIE4 Uniprot:Q9SIE4
Length = 261
Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 15 NLSENGIDAESKKLPSSK----YKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAAR 68
NLS N I ++ +SK Y+GV + G+W A+I + R+WLGTF E+AA
Sbjct: 49 NLSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAAL 108
Query: 69 VYDTAALRFRGQNAITNFRTSLETD 93
YD AA + RG A NF + D
Sbjct: 109 AYDQAAFQLRGDIAKLNFPNLIHED 133
>TAIR|locus:2005704 [details] [associations]
symbol:AT1G75490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006950 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 EMBL:AC006434 EMBL:AK175902 IPI:IPI00536836
RefSeq:NP_177681.2 UniGene:At.34770 UniGene:At.74106
ProteinModelPortal:Q9LQZ2 SMR:Q9LQZ2 PaxDb:Q9LQZ2 PRIDE:Q9LQZ2
EnsemblPlants:AT1G75490.1 GeneID:843885 KEGG:ath:AT1G75490
GeneFarm:3662 TAIR:At1g75490 eggNOG:NOG311950 HOGENOM:HOG000033697
InParanoid:Q9LQZ2 OMA:ISWEHIN PhylomeDB:Q9LQZ2
ProtClustDB:CLSN2714736 Genevestigator:Q9LQZ2 GermOnline:AT1G75490
Uniprot:Q9LQZ2
Length = 206
Score = 117 (46.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 30 SSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVYDTAALRFRGQNAITNFR 87
S YKGV + G+W A+I E ++ R+WLGTF EAA YD+AA + G A N
Sbjct: 39 SCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLP 98
Query: 88 TSLET 92
SL +
Sbjct: 99 ESLRS 103
>TAIR|locus:2027171 [details] [associations]
symbol:ORA47 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0002213 "defense response to insect"
evidence=IEP] [GO:0009611 "response to wounding" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009607
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237624 EMBL:AY128309 EMBL:BT003348
IPI:IPI00547563 PIR:A96779 RefSeq:NP_177631.1 UniGene:At.34825
ProteinModelPortal:Q9S7L5 SMR:Q9S7L5 STRING:Q9S7L5
EnsemblPlants:AT1G74930.1 GeneID:843832 KEGG:ath:AT1G74930
TAIR:At1g74930 eggNOG:NOG268869 InParanoid:Q9S7L5 OMA:HSRERIW
PhylomeDB:Q9S7L5 ProtClustDB:CLSN2914217 Genevestigator:Q9S7L5
Uniprot:Q9S7L5
Length = 195
Score = 116 (45.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 31 SKYKGVVPQPNGRWGAQIYEKH--QRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
SKYKGV + G+W ++I H +R+WLG++ E+AAR +D A RG +A NF
Sbjct: 19 SKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNF 76
>TAIR|locus:2119555 [details] [associations]
symbol:AT4G13620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL035528 EMBL:AL161537
EMBL:AY560871 EMBL:BT029729 IPI:IPI00527648 PIR:G85147 PIR:T05231
RefSeq:NP_193098.1 UniGene:At.33355 ProteinModelPortal:Q9SVQ0
SMR:Q9SVQ0 MINT:MINT-7263031 PaxDb:Q9SVQ0 EnsemblPlants:AT4G13620.1
GeneID:826996 KEGG:ath:AT4G13620 TAIR:At4g13620 eggNOG:NOG330371
HOGENOM:HOG000112389 InParanoid:Q9SVQ0 OMA:NEWVEIN PhylomeDB:Q9SVQ0
ProtClustDB:CLSN2713732 Genevestigator:Q9SVQ0 Uniprot:Q9SVQ0
Length = 388
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 29 PSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
P+ Y+GV + G+W A+I RVWLGTF E+AA YDTAA RG+ A NF
Sbjct: 228 PTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNF 287
>UNIPROTKB|C7J2Z1 [details] [associations]
symbol:ABI4 "Ethylene-responsive transcription factor ABI4"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0006950 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG282672 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AC136221 EMBL:AP008211 RefSeq:NP_001174376.1 UniGene:Os.101814
GeneID:9271873 KEGG:dosa:Os05t0351200-00 KEGG:osa:9271873
Gramene:C7J2Z1 HOGENOM:HOG000241371 OMA:PRAHLNL Uniprot:C7J2Z1
Length = 269
Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 32 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITN 85
+Y+GV + G+W A+I E K R WLGTF E+AAR YD AAL G A N
Sbjct: 49 RYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGPRAHLN 104
>TAIR|locus:2135282 [details] [associations]
symbol:AT4G39780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL022605 EMBL:AL161595
HOGENOM:HOG000239817 EMBL:AY560850 EMBL:BT025719 IPI:IPI00529599
PIR:T05015 RefSeq:NP_195688.1 UniGene:At.2297
ProteinModelPortal:O65665 SMR:O65665 MINT:MINT-7263056 PRIDE:O65665
EnsemblPlants:AT4G39780.1 GeneID:830136 KEGG:ath:AT4G39780
TAIR:At4g39780 eggNOG:NOG292506 InParanoid:O65665 OMA:TEYQESE
PhylomeDB:O65665 ProtClustDB:CLSN2916086 Genevestigator:O65665
Uniprot:O65665
Length = 272
Score = 119 (46.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 26 KKLPSSK-YKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNA 82
K + + K Y+GV + G+W A+I + R+WLGTF EEAA YD AA + RG+ A
Sbjct: 85 KNMTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFA 144
Query: 83 ITNF 86
NF
Sbjct: 145 RLNF 148
>TAIR|locus:2159068 [details] [associations]
symbol:LEP "LEAFY PETIOLE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009739 "response to gibberellin stimulus"
evidence=IMP] [GO:0010030 "positive regulation of seed germination"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0010030 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009739 HSSP:O80337
EMBL:AB005230 HOGENOM:HOG000239107 GO:GO:0009740 EMBL:AF216581
EMBL:AY560852 EMBL:BT024919 IPI:IPI00530212 RefSeq:NP_196895.1
UniGene:At.64231 ProteinModelPortal:Q9M644 SMR:Q9M644
EnsemblPlants:AT5G13910.1 GeneID:831238 KEGG:ath:AT5G13910
TAIR:At5g13910 eggNOG:NOG306571 InParanoid:Q9M644 OMA:GSRARTN
PhylomeDB:Q9M644 ProtClustDB:CLSN2916620 Genevestigator:Q9M644
Uniprot:Q9M644
Length = 211
Score = 116 (45.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 31/74 (41%), Positives = 41/74 (55%)
Query: 19 NGIDAESKKLPS----SKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDT 72
N ++SKK +++ GV +P GR+ A+I + +R WLGTF EEAA YD
Sbjct: 2 NTTSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDR 61
Query: 73 AALRFRGQNAITNF 86
AA RG A TNF
Sbjct: 62 AARSMRGTRARTNF 75
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 151 GSNCFQETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGL-LLNFEDST 209
G+ +E P F K LT SD +P+ AE F A + + +D
Sbjct: 104 GNGNGKEKPASFA--KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIH 161
Query: 210 QKVWRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVG 255
+ W+ R+ Y + + ++LT GWS FV +K + AGD++ F RS G
Sbjct: 162 GETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESG 207
>TAIR|locus:2005490 [details] [associations]
symbol:ABI4 "ABA INSENSITIVE 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009747
"hexokinase-dependent signaling" evidence=NAS] [GO:0006970
"response to osmotic stress" evidence=IMP] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IMP] [GO:0009749
"response to glucose stimulus" evidence=IMP] [GO:0010896
"regulation of triglyceride catabolic process" evidence=IMP]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0005983 "starch catabolic process" evidence=NAS] [GO:0010353
"response to trehalose stimulus" evidence=IMP] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0032880 "regulation of protein
localization" evidence=IDA] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0010449 "root meristem growth" evidence=IMP]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=IEP] [GO:0048316 "seed development" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009738
GO:GO:0009873 GO:GO:0009414 GO:GO:0009749 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0032880 GO:GO:0006351
GO:GO:0048527 GO:GO:0010182 GO:GO:0006970 GO:GO:0031930
EMBL:AF040959 EMBL:AF085279 EMBL:AY560890 EMBL:DQ446612
EMBL:DQ653050 IPI:IPI00530730 PIR:G84826 RefSeq:NP_181551.1
UniGene:At.50594 ProteinModelPortal:A0MES8 SMR:A0MES8 STRING:A0MES8
EnsemblPlants:AT2G40220.1 GeneID:818614 KEGG:ath:AT2G40220
TAIR:At2g40220 eggNOG:NOG282672 HOGENOM:HOG000033770
InParanoid:A0MES8 KO:K09286 OMA:STSFHHE PhylomeDB:A0MES8
ProtClustDB:CLSN2913058 Genevestigator:A0MES8 GO:GO:0044212
GO:GO:0010896 GO:GO:0010353 GO:GO:0010449 GO:GO:0048316
GO:GO:0005983 Gene3D:3.30.730.10 SUPFAM:SSF54171 Uniprot:A0MES8
Length = 328
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 33/94 (35%), Positives = 45/94 (47%)
Query: 1 MASNSSSVDLDHDHNLSENGIDAESKKLPSS---KYKGVVPQPNGRWGAQIYE--KHQRV 55
+ N+ D D + S + K P + +Y+GV + G+W A+I E K R
Sbjct: 20 LTHNNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRK 79
Query: 56 WLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
WLGTF E+AAR YD AA+ G A N S
Sbjct: 80 WLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPS 113
>TAIR|locus:2123708 [details] [associations]
symbol:AT4G28140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AL161572 HOGENOM:HOG000112388
EMBL:DQ011579 EMBL:AY074574 EMBL:AY097394 IPI:IPI00520768
PIR:T09030 RefSeq:NP_194543.1 UniGene:At.32043 UniGene:At.72101
ProteinModelPortal:Q9M0J3 SMR:Q9M0J3 PRIDE:Q9M0J3
EnsemblPlants:AT4G28140.1 GeneID:828929 KEGG:ath:AT4G28140
TAIR:At4g28140 eggNOG:NOG269342 InParanoid:Q9M0J3 OMA:DQKEPET
PhylomeDB:Q9M0J3 ProtClustDB:CLSN2915905 Genevestigator:Q9M0J3
Uniprot:Q9M0J3
Length = 292
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 22 DAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQR--VWLGTFIEEEEAARVYDTAALRFRG 79
+A + + Y+GV + G+W A+I + R +WLGTF EEAA YD A + RG
Sbjct: 132 EAVQPYIATKLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRG 191
Query: 80 QNAITNF 86
+A NF
Sbjct: 192 HSATLNF 198
>TAIR|locus:2035257 [details] [associations]
symbol:AT1G01250 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC023628 HOGENOM:HOG000237624 EMBL:BT025752
EMBL:AY086507 IPI:IPI00535297 PIR:G86142 RefSeq:NP_563624.1
UniGene:At.42657 ProteinModelPortal:Q1ECI2 SMR:Q1ECI2
EnsemblPlants:AT1G01250.1 GeneID:839322 KEGG:ath:AT1G01250
GeneFarm:2900 TAIR:At1g01250 eggNOG:NOG259440 InParanoid:Q1ECI2
OMA:FWEGIEL PhylomeDB:Q1ECI2 ProtClustDB:CLSN2687605
Genevestigator:Q1ECI2 Uniprot:Q1ECI2
Length = 192
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 20 GIDAESKKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRF 77
G + S Y GV + G+W ++I E K R+WLG+F E AA+ YD AA
Sbjct: 32 GKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCL 91
Query: 78 RGQNAITNFRTSLE 91
+G+ A NF +E
Sbjct: 92 KGRKAQLNFPEEIE 105
>TAIR|locus:2195062 [details] [associations]
symbol:AT1G12630 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AC025417 EMBL:DQ145776 EMBL:DQ446245 EMBL:DQ652834
EMBL:AY560893 IPI:IPI00534088 PIR:A86260 RefSeq:NP_172723.2
UniGene:At.50648 ProteinModelPortal:Q38Q39 SMR:Q38Q39
EnsemblPlants:AT1G12630.1 GeneID:837819 KEGG:ath:AT1G12630
TAIR:At1g12630 eggNOG:NOG249688 InParanoid:Q38Q39 OMA:RARECHV
PhylomeDB:Q38Q39 ProtClustDB:CLSN2920226 Genevestigator:Q38Q39
Uniprot:Q38Q39
Length = 192
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
Y+G+ + +G+W ++I E K R+WLGT+ E AA YD AA+ +G+ A+ NF S+
Sbjct: 19 YRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSV 77
>TAIR|locus:2173063 [details] [associations]
symbol:AT5G52020 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB015478 HOGENOM:HOG000237624
EMBL:AK176464 EMBL:AY086443 IPI:IPI00519238 RefSeq:NP_200015.1
UniGene:At.58041 ProteinModelPortal:Q9FJ90 SMR:Q9FJ90
EnsemblPlants:AT5G52020.1 GeneID:835277 KEGG:ath:AT5G52020
TAIR:At5g52020 eggNOG:NOG256892 InParanoid:Q9FJ90 OMA:SPENHEG
PhylomeDB:Q9FJ90 ProtClustDB:CLSN2916850 Genevestigator:Q9FJ90
Uniprot:Q9FJ90
Length = 232
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 31 SKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
S ++G+ + NG+W ++I E K R+WLGT+ E AA YD AAL +G +A+ NF
Sbjct: 63 SIFRGIRLR-NGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNF 119
>TAIR|locus:2029491 [details] [associations]
symbol:RAP2.4 "related to AP2 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0071472 "cellular response to salt
stress" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP;IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IMP]
[GO:0010017 "red or far-red light signaling pathway" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IMP] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0009409
"response to cold" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611
GO:GO:0009873 GO:GO:0045595 GO:GO:0009409 GO:GO:0009414
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0071472 GO:GO:0010017 EMBL:AC009243 EMBL:AC012680
HOGENOM:HOG000239817 UniGene:At.25524 EMBL:AF370152 EMBL:AY150468
EMBL:AF003097 IPI:IPI00519366 RefSeq:NP_177931.1 UniGene:At.71798
ProteinModelPortal:Q8H1E4 SMR:Q8H1E4 MINT:MINT-7262714
STRING:Q8H1E4 EnsemblPlants:AT1G78080.1 GeneID:844143
KEGG:ath:AT1G78080 TAIR:At1g78080 eggNOG:NOG306355
InParanoid:Q8H1E4 OMA:KLEAICK PhylomeDB:Q8H1E4
ProtClustDB:CLSN2679481 Genevestigator:Q8H1E4 Uniprot:Q8H1E4
Length = 334
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 29 PSSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
P+ Y+GV + G+W A+I R+WLGTF EEAA YD AA + RG A NF
Sbjct: 148 PTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNF 207
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 92 TDDEDDYMEKIF-LSSHSKAEIVDMLRKHTYKHELEQSKQNYACVGISCYNNSSGFSDLF 150
T DE D++ IF L S + +V + RK + + + YA + + +++
Sbjct: 59 TRDELDHIRPIFDLPSKLRCRVVAIDRKVD-----KNTDEVYAQISLM-----PDTTEVM 108
Query: 151 GSNCFQET--PVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFA---LSSEIASKGLLLNF 205
N +T P+ + F K+LT SDV ++IPKQ A + F +S I+++ L+
Sbjct: 109 THNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVA-- 166
Query: 206 EDSTQKVWRLRYCYWSSSQSYVLTKG--WSRFVKEKGVKAGDTVSFWRSNVGSNSKL 260
+D + W ++ + + Q ++ T G WS F K + GD R G N +L
Sbjct: 167 KDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLR---GENGEL 220
>TAIR|locus:2012653 [details] [associations]
symbol:AT1G33760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560838
EMBL:AC010164 EMBL:BT015928 EMBL:BT020566 IPI:IPI00520537
PIR:A86461 RefSeq:NP_174636.1 UniGene:At.39878
ProteinModelPortal:Q9LQ28 SMR:Q9LQ28 EnsemblPlants:AT1G33760.1
GeneID:840267 KEGG:ath:AT1G33760 TAIR:At1g33760 eggNOG:NOG312231
InParanoid:Q9LQ28 OMA:FPRPESS PhylomeDB:Q9LQ28
ProtClustDB:CLSN2914626 Genevestigator:Q9LQ28 Uniprot:Q9LQ28
Length = 184
Score = 111 (44.1 bits), Expect = 0.00019, P = 0.00019
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 33 YKGVVPQPNGRWGAQIYE--KHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTSL 90
Y+G+ + G+W ++I E K R+WLG++ E AA YD AAL RG+ NF +
Sbjct: 20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79
Query: 91 ETDDEDDYMEKIFLSSHSKAEIVD---MLRKHTYKHELEQSKQNYACVGIS 138
++ + S H +A D M + +S Q + VG+S
Sbjct: 80 DSFPRPESSS----SEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLS 126
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 33/94 (35%), Positives = 45/94 (47%)
Query: 159 PVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFA-LSSEIASKGLLLNFEDSTQKVWRLRY 217
P EF F K LT SD +P++ AEK F L + + +D W R+
Sbjct: 122 PTEF-FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRH 180
Query: 218 CYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWR 251
Y + ++LT GWS FV K + AGD+V F R
Sbjct: 181 IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVR 214
>TAIR|locus:2146985 [details] [associations]
symbol:ESE3 "ethylene and salt inducible 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009740 "gibberellic acid
mediated signaling pathway" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006259
HOGENOM:HOG000237624 EMBL:AY045659 EMBL:AY059664 IPI:IPI00523095
RefSeq:NP_197901.1 UniGene:At.26169 ProteinModelPortal:Q94AW5
SMR:Q94AW5 EnsemblPlants:AT5G25190.1 GeneID:832590
KEGG:ath:AT5G25190 TAIR:At5g25190 eggNOG:NOG283264
InParanoid:Q94AW5 OMA:IMCGPRA PhylomeDB:Q94AW5
ProtClustDB:CLSN2686531 Genevestigator:Q94AW5 Uniprot:Q94AW5
Length = 181
Score = 110 (43.8 bits), Expect = 0.00023, P = 0.00023
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 29 PSSKYKGVVPQPNGRWGAQIYEK--HQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
P +++GV + G W ++I R+WLGTF E+AAR YD AA G A TNF
Sbjct: 4 PQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNF 63
>TAIR|locus:2055002 [details] [associations]
symbol:ERF13 "ethylene-responsive element binding factor
13" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC002388 HOGENOM:HOG000239314
EMBL:AF325089 EMBL:AF370540 EMBL:AY072471 EMBL:AY088387
IPI:IPI00525442 PIR:T00409 RefSeq:NP_182011.1 UniGene:At.29014
ProteinModelPortal:Q8L9K1 SMR:Q8L9K1 STRING:Q8L9K1
EnsemblPlants:AT2G44840.1 GeneID:819093 KEGG:ath:AT2G44840
TAIR:At2g44840 eggNOG:NOG314595 InParanoid:Q8L9K1 OMA:EQKRESH
PhylomeDB:Q8L9K1 ProtClustDB:CLSN2913027 Genevestigator:Q8L9K1
GermOnline:AT2G44840 Uniprot:Q8L9K1
Length = 226
Score = 113 (44.8 bits), Expect = 0.00026, P = 0.00026
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 32 KYKGVVPQPNGRWGAQIYEKHQ---RVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
+Y+GV +P G++ A+I + + RVWLGT+ E+AA YD AA + RG A NF
Sbjct: 91 QYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNF 148
>TAIR|locus:2158123 [details] [associations]
symbol:AT5G67010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026640 HOGENOM:HOG000112333
ProtClustDB:CLSN2683315 IPI:IPI00537557 RefSeq:NP_201502.1
UniGene:At.65709 ProteinModelPortal:Q9FGC9 SMR:Q9FGC9
EnsemblPlants:AT5G67010.1 GeneID:836836 KEGG:ath:AT5G67010
TAIR:At5g67010 eggNOG:NOG312693 OMA:ISNTGGD PhylomeDB:Q9FGC9
Genevestigator:Q9FGC9 Uniprot:Q9FGC9
Length = 162
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 32 KYKGVVPQPNGRWGAQIYEKHQRV--WLGTFIEEEEAARVYDTAA 74
K+KGV +P+G+W A+I++ R WLGTF E AA YD AA
Sbjct: 89 KHKGVRKKPSGKWSAEIWDPSTRTRRWLGTFPTAEMAADAYDEAA 133
>TAIR|locus:2195052 [details] [associations]
symbol:DDF1 "DWARF AND DELAYED FLOWERING 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010371 "regulation of gibberellin biosynthetic
process" evidence=IMP] [GO:0016049 "cell growth" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0050826 "response to freezing" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0016049 GO:GO:0009651 GO:GO:0009414 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0009408 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0050826 GO:GO:0048510 GO:GO:0010371
HOGENOM:HOG000237624 ProtClustDB:CLSN2682371 EMBL:AY560892
EMBL:AC025417 EMBL:AK228194 IPI:IPI00542906 PIR:H86259
RefSeq:NP_172721.1 UniGene:At.42068 ProteinModelPortal:Q9LN86
SMR:Q9LN86 EnsemblPlants:AT1G12610.1 GeneID:837817
KEGG:ath:AT1G12610 GeneFarm:3608 TAIR:At1g12610 eggNOG:NOG323951
InParanoid:Q9LN86 OMA:EVREPTH PhylomeDB:Q9LN86
Genevestigator:Q9LN86 GermOnline:AT1G12610 Uniprot:Q9LN86
Length = 209
Score = 112 (44.5 bits), Expect = 0.00026, P = 0.00026
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 33 YKGVVPQPNGRWGAQIYEK-HQR-VWLGTFIEEEEAARVYDTAALRFRGQNAITNFRTS 89
Y+G+ + +W ++ E HQR +WLGT+ + AAR +D A L RG++A NF S
Sbjct: 30 YRGIRRRNGDKWVCEVREPTHQRRIWLGTYPTADMAARAHDVAVLALRGRSACLNFADS 88
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 159 PVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFA---LSSEIASKGLL-LNFEDSTQKVWR 214
P+ F KVLT SD +PK+ A + +S + ++ +L ++ D+ WR
Sbjct: 121 PLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQ---WR 177
Query: 215 LRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGN 271
R+ Y + Q + LT GW+ F+ K + GD + F R G ++ I Q GN
Sbjct: 178 FRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGE-LRVGIRRARHQQGN 233
>TAIR|locus:2194819 [details] [associations]
symbol:AT1G44830 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:1900030 "regulation of pectin biosynthetic
process" evidence=IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560839 EMBL:AC020576 EMBL:BT025270
EMBL:AK175503 IPI:IPI00520360 PIR:D96507 RefSeq:NP_175104.1
UniGene:At.50652 ProteinModelPortal:Q9LPE8 SMR:Q9LPE8
EnsemblPlants:AT1G44830.1 GeneID:841047 KEGG:ath:AT1G44830
TAIR:At1g44830 eggNOG:NOG243601 InParanoid:Q9LPE8 OMA:LSESSSW
PhylomeDB:Q9LPE8 Genevestigator:Q9LPE8 GO:GO:1900030 Uniprot:Q9LPE8
Length = 211
Score = 111 (44.1 bits), Expect = 0.00035, P = 0.00035
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 17 SENGIDAESKKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFIEEEEAARVYDTAA 74
S + S + KYKGV + G W ++I +Q R+WLG++ E AAR YD A
Sbjct: 19 SSSSSSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAAL 78
Query: 75 LRFRGQNA 82
L +G +A
Sbjct: 79 LCLKGSSA 86
>TAIR|locus:2126619 [details] [associations]
symbol:AT4G31060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AL022198 EMBL:AL161578 EMBL:AY560884 EMBL:BT011774
EMBL:BT012399 IPI:IPI00530702 PIR:G85363 RefSeq:NP_567867.1
UniGene:At.31779 UniGene:At.74201 ProteinModelPortal:Q6NLD5
SMR:Q6NLD5 EnsemblPlants:AT4G31060.1 GeneID:829233
KEGG:ath:AT4G31060 TAIR:At4g31060 eggNOG:NOG279537
HOGENOM:HOG000097077 InParanoid:Q6NLD5 OMA:MDIDWIN PhylomeDB:Q6NLD5
ProtClustDB:CLSN2689698 Genevestigator:Q6NLD5 Uniprot:Q6NLD5
Length = 187
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 33 YKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNFRT 88
Y+GV + G+W ++I + +R+WLG++ E+AAR YD A RG+ + NF T
Sbjct: 27 YRGVRKRSWGKWVSEIRVPKTGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFPT 84
>TAIR|locus:2051359 [details] [associations]
symbol:ERF53 "ERF domain 53" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:2000070 "regulation of
response to water deprivation" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC006234 EMBL:AY062843 EMBL:AY081659
IPI:IPI00525064 PIR:E84594 RefSeq:NP_179685.1 UniGene:At.27216
ProteinModelPortal:Q9SKT1 SMR:Q9SKT1 STRING:Q9SKT1
EnsemblPlants:AT2G20880.1 GeneID:816622 KEGG:ath:AT2G20880
TAIR:At2g20880 eggNOG:NOG272542 HOGENOM:HOG000112388
InParanoid:Q9SKT1 OMA:SEETGWA PhylomeDB:Q9SKT1
ProtClustDB:CLSN2683557 Genevestigator:Q9SKT1 GO:GO:2000070
Uniprot:Q9SKT1
Length = 336
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 33 YKGVVPQPNGRWGAQIYEKHQR--VWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
Y+GV + G+W A+I + R +WLGTF EEAA YD A + RG+ A NF
Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNF 242
>TAIR|locus:1005716737 [details] [associations]
symbol:AT1G08985 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC000106 EMBL:AK118638 EMBL:BT004683
IPI:IPI00525283 RefSeq:NP_849620.1 UniGene:At.44246
ProteinModelPortal:Q8GWU1 SMR:Q8GWU1 EnsemblPlants:AT1G08985.1
GeneID:837419 KEGG:ath:AT1G08985 TAIR:At1g08985 eggNOG:NOG254156
HOGENOM:HOG000155126 OMA:DVIKLYW PhylomeDB:Q8GWU1
ProtClustDB:CLSN2918039 Genevestigator:Q8GWU1 Uniprot:Q8GWU1
Length = 101
Score = 94 (38.1 bits), Expect = 0.00043, P = 0.00043
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 166 KVLTPSDVGKLNRMVIPKQQAEKHFALSS-EIASKGLLLNFEDSTQKVW-RLRYCYWSSS 223
K L+ +D N++++P+ + E + + G+ + D+T W LR S
Sbjct: 9 KTLSETDCSHDNKLILPRDKVENIVRSTGVPVPRMGIQVEILDNTNSYWVNLR----QSQ 64
Query: 224 QSYVLTKGWSRFVKEKGVKAGDTVS-FWRS 252
+ Y + +GW + +KAGD + +W++
Sbjct: 65 RGYFIGRGWGELRDARNLKAGDVIKLYWQN 94
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 163 LFEKVLTPSDVGKLNRMVIPKQQAEKHFA---LSSEIASKGLLLNFEDSTQKVWRLRYCY 219
+F K LT SD +P++ AE F S S+ LL D WR R+ Y
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLAR--DLHGLEWRFRHIY 215
Query: 220 WSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVG 255
+ ++LT GWS FV +K + +GD V F R + G
Sbjct: 216 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDG 251
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 156 QETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEKHFALSSEIASKGLLLNFEDSTQKVWRL 215
Q P+ F KVLT SD +PK+ A + + ++ LL +D WR
Sbjct: 118 QFRPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLP-PLPLPAQELLA--KDLHGNQWRF 174
Query: 216 RYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGN 271
R+ Y + Q + LT GW+ F K + GD + F R G ++ I Q GN
Sbjct: 175 RHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGE-LRVGIRRARHQQGN 229
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 36/119 (30%), Positives = 53/119 (44%)
Query: 156 QETPVEFLFEKVLTPSDVGKLNRMVIPKQQAEK---HFALSSEIASKGLLLNFEDSTQKV 212
Q P+ F KVLT SD +PK+ A + +S + ++ LL Q
Sbjct: 118 QFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQ-- 175
Query: 213 WRLRYCYWSSSQSYVLTKGWSRFVKEKGVKAGDTVSFWRSNVGSNSKLFIDCKLQQNGN 271
WR + Y + Q ++LT GW+ F K + AGD + F R G ++ I Q GN
Sbjct: 176 WRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGE-LRVGIRRARHQQGN 233
>TAIR|locus:504956445 [details] [associations]
symbol:AT5G21960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC140977 EMBL:AL589883
HOGENOM:HOG000237624 EMBL:AY560866 EMBL:BT011577 EMBL:BT012243
IPI:IPI00534105 RefSeq:NP_680184.1 UniGene:At.45636
ProteinModelPortal:Q9C591 SMR:Q9C591 EnsemblPlants:AT5G21960.1
GeneID:832256 KEGG:ath:AT5G21960 TAIR:At5g21960 eggNOG:NOG289112
InParanoid:Q9C591 OMA:RFACEEE PhylomeDB:Q9C591
ProtClustDB:CLSN2917830 Genevestigator:Q9C591 Uniprot:Q9C591
Length = 216
Score = 109 (43.4 bits), Expect = 0.00066, P = 0.00066
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 30 SSKYKGVVPQPNGRWGAQIY--EKHQRVWLGTFIEEEEAARVYDTAALRFRGQNAITNF 86
S KY GV + G+W A+I R+WLG+F E+AAR +D A RG A NF
Sbjct: 4 SPKYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNF 62
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 305 305 0.00098 115 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 160
No. of states in DFA: 612 (65 KB)
Total size of DFA: 236 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.66u 0.10s 25.76t Elapsed: 00:00:01
Total cpu time: 25.68u 0.10s 25.78t Elapsed: 00:00:01
Start: Fri May 10 21:19:24 2013 End: Fri May 10 21:19:25 2013
WARNINGS ISSUED: 1