BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021947
(305 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 160/255 (62%), Gaps = 10/255 (3%)
Query: 2 VVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VAVK+LK E QG + ++ TEV + H NL++L G+C+ RLLVY +M GS+
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
Query: 61 NHLFRRGPQ---PLSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKASNILLDAEFNAK 116
+ L R P+ PL W R ++A+G+A+GL +LHD + ++I+RD KA+NILLD EF A
Sbjct: 124 SCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 182
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
+ DFGLAK D HV V GT G+ APEY++TG+ + K+DV+ +GV+LLEL++G+
Sbjct: 183 VGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 177 AVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
A D ++ + L+DW K L +K KL ++D L G Y + +AL C +
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 235 PKLRPRMSEVLAILE 249
P RP+MSEV+ +LE
Sbjct: 301 PMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 159/255 (62%), Gaps = 10/255 (3%)
Query: 2 VVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VAVK+LK E QG + ++ TEV + H NL++L G+C+ RLLVY +M GS+
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 61 NHLFRRGPQ---PLSWAVRMKVAIGAAKGLTFLHD-AESQVIYRDFKASNILLDAEFNAK 116
+ L R P+ PL W R ++A+G+A+GL +LHD + ++I+RD KA+NILLD EF A
Sbjct: 116 SCL-RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
+ DFGLAK D HV V G G+ APEY++TG+ + K+DV+ +GV+LLEL++G+
Sbjct: 175 VGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 177 AVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
A D ++ + L+DW K L +K KL ++D L G Y + +AL C +
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292
Query: 235 PKLRPRMSEVLAILE 249
P RP+MSEV+ +LE
Sbjct: 293 PMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 147/249 (59%), Gaps = 5/249 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K+ PE QG +E+ TE+ L HP+LV LIG+C E +L+Y++M G+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 63 LFRRG--PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L+ +SW R+++ IGAA+GL +LH +I+RD K+ NILLD F K++DF
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDF 183
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
G++K G D+TH+ V GT GY PEY GRLT KSDVYSFGVVL E+L R A+ +
Sbjct: 184 GISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243
Query: 181 TKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPR 240
+ +L +WA + +L +I+D L + ++ A++CL + RP
Sbjct: 244 SLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 241 MSEVLAILE 249
M +VL LE
Sbjct: 303 MGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 146/249 (58%), Gaps = 5/249 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K+ PE QG +E+ TE+ L HP+LV LIG+C E +L+Y++M G+L+ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 63 LFRRG--PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L+ +SW R+++ IGAA+GL +LH +I+RD K+ NILLD F K++DF
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDF 183
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
G++K G +TH+ V GT GY PEY GRLT KSDVYSFGVVL E+L R A+ +
Sbjct: 184 GISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243
Query: 181 TKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPR 240
+ +L +WA + +L +I+D L + ++ A++CL + RP
Sbjct: 244 SLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 241 MSEVLAILE 249
M +VL LE
Sbjct: 303 MGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 146/238 (61%), Gaps = 7/238 (2%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL-FRRGPQPLSWAV 75
+++ E+ + + H NLV+L+G+ +G++ LVY +MP GSL + L G PLSW +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDFGLA+A +T +
Sbjct: 135 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 195
++++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+ + Q L+D +
Sbjct: 193 SRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEE 249
Query: 196 YLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+++ + +D K+ + ++A QCL+ + RP + +V +L+ + A
Sbjct: 250 IEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 145/238 (60%), Gaps = 7/238 (2%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL-FRRGPQPLSWAV 75
+++ E+ + + H NLV+L+G+ +G++ LVY +MP GSL + L G PLSW +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDFGLA+A +T +
Sbjct: 135 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 195
+++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+ + Q L+D +
Sbjct: 193 XRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEE 249
Query: 196 YLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+++ + +D K+ + ++A QCL+ + RP + +V +L+ + A
Sbjct: 250 IEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 144/238 (60%), Gaps = 7/238 (2%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL-FRRGPQPLSWAV 75
+++ E+ + + H NLV+L+G+ +G++ LVY +MP GSL + L G PLSW +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDFGLA+A + +
Sbjct: 129 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMX 186
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 195
+++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+ + Q L+D +
Sbjct: 187 XRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEE 243
Query: 196 YLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+++ + +D K+ + ++A QCL+ + RP + +V +L+ + A
Sbjct: 244 IEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 139/238 (58%), Gaps = 7/238 (2%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL-FRRGPQPLSWAV 75
+++ E+ + H NLV+L+G+ +G++ LVY + P GSL + L G PLSW
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
R K+A GAA G+ FLH E+ I+RD K++NILLD F AK+SDFGLA+A +
Sbjct: 126 RCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX 183
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 195
++++GT Y APE + G +T KSD+YSFGVVLLE+++G AVD+ + Q L+D +
Sbjct: 184 SRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEE 240
Query: 196 YLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+++ + +D K + ++A QCL+ + RP + +V +L+ A
Sbjct: 241 IEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTA 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 21/252 (8%)
Query: 3 VAVKKLKPEGFQGHK--EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L + F + E+L EV + +L HPN+V +G + N +V E++ +GSL
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 61 NHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
L + G + L R+ +A AKG+ +LH+ +++RD K+ N+L+D ++ K+ D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FGL++ S GT + APE + KSDVYSFGV+L EL +
Sbjct: 183 FGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL----ATLQ 236
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
+ + + V A + + ++ R ++ PQ AA C NEP RP
Sbjct: 237 QPWGNLNPAQVVAAVGFKCKRLEIPRNLN-------PQVAAIIEG-----CWTNEPWKRP 284
Query: 240 RMSEVLAILERL 251
+ ++ +L L
Sbjct: 285 SFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 23/253 (9%)
Query: 3 VAVKKLKPEGFQGHK--EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L + F + E+L EV + +L HPN+V +G + N +V E++ +GSL
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 61 NHLFRRGP-QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
L + G + L R+ +A AKG+ +LH+ +++R+ K+ N+L+D ++ K+ D
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 120 FGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
FGL++ + T +S++ GT + APE + KSDVYSFGV+L EL +
Sbjct: 183 FGLSRLKAS---TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL----ATL 235
Query: 179 DKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
+ + + V A + + ++ R ++ PQ AA C NEP R
Sbjct: 236 QQPWGNLNPAQVVAAVGFKCKRLEIPRNLN-------PQVAAIIEG-----CWTNEPWKR 283
Query: 239 PRMSEVLAILERL 251
P + ++ +L L
Sbjct: 284 PSFATIMDLLRPL 296
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 27/254 (10%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L+E + +GQ HPN+++L G G ++V E+M GSL+
Sbjct: 80 VAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 61 NHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
L G + V M +GA G+ +L D ++RD A N+L+D+ K+SD
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGA--GMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSD 194
Query: 120 FGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
FGL++ D + +T + APE +A ++ SDV+SFGVV+ E+L+
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG--- 251
Query: 179 DKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
+PY + R + ++ P H L L C + +
Sbjct: 252 --------------ERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ 297
Query: 238 RPRMSEVLAILERL 251
RPR S+++++L+ L
Sbjct: 298 RPRFSQIVSVLDAL 311
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 31/256 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L+E + +GQ HPN+++L G G ++V E+M GSL+
Sbjct: 80 VAIKALKA-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 61 NHL-FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
L G + V M +GA G+ +L D ++RD A N+L+D+ K+SD
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGA--GMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSD 194
Query: 120 FGLAKA---GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
FGL++ P T ++ + APE +A ++ SDV+SFGVV+ E+L+
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG- 251
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
+PY + R + ++ P H L L C + +
Sbjct: 252 ----------------ERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDR 295
Query: 236 KLRPRMSEVLAILERL 251
RPR S+++++L+ L
Sbjct: 296 AQRPRFSQIVSVLDAL 311
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLE--GENRLLVYEFMPKGSL 59
VAVK LKPE H + E+ L L+H N+VK G C E G L+ EF+P GSL
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ +L + ++ ++K A+ KG+ +L Q ++RD A N+L+++E K+ D
Sbjct: 113 KEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSRQYVHRDLAARNVLVESEHQVKIGD 169
Query: 120 FGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
FGL KA T + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 170 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-YCDS 228
Query: 179 DKTKVGI 185
D + + +
Sbjct: 229 DSSPMAL 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLE--GENRLLVYEFMPKGSL 59
VAVK LKPE H + E+ L L+H N+VK G C E G L+ EF+P GSL
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ +L + ++ ++K A+ KG+ +L Q ++RD A N+L+++E K+ D
Sbjct: 101 KEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSRQYVHRDLAARNVLVESEHQVKIGD 157
Query: 120 FGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
FGL KA T + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 158 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-YCDS 216
Query: 179 DKTKVGI 185
D + + +
Sbjct: 217 DSSPMAL 223
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 33/255 (12%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K+++ E + K ++ E+ L +++HPN+VKL G CL LV E+ GSL N
Sbjct: 35 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 90
Query: 63 LFRRGPQPLSWAVR-MKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFNA-KLSD 119
L P P A M + ++G+ +LH + + +I+RD K N+LL A K+ D
Sbjct: 91 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 150
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FG A +TH+ T G+ + APE + K DV+S+G++L E+++ R
Sbjct: 151 FGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR---- 201
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYP---QKAAHTAATLALQCLNNEPK 236
KP+ FRIM G P + +L +C + +P
Sbjct: 202 --------------KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPS 247
Query: 237 LRPRMSEVLAILERL 251
RP M E++ I+ L
Sbjct: 248 QRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 33/255 (12%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K+++ E + K ++ E+ L +++HPN+VKL G CL LV E+ GSL N
Sbjct: 34 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 89
Query: 63 LFRRGPQPLSWAVR-MKVAIGAAKGLTFLHDAESQ-VIYRDFKASNILLDAEFNA-KLSD 119
L P P A M + ++G+ +LH + + +I+RD K N+LL A K+ D
Sbjct: 90 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FG A +TH+ T G+ + APE + K DV+S+G++L E+++ R
Sbjct: 150 FGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR---- 200
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYP---QKAAHTAATLALQCLNNEPK 236
KP+ FRIM G P + +L +C + +P
Sbjct: 201 --------------KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPS 246
Query: 237 LRPRMSEVLAILERL 251
RP M E++ I+ L
Sbjct: 247 QRPSMEEIVKIMTHL 261
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 38/265 (14%)
Query: 2 VVAVKKL-------KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 54
VVA+K L + E + +E+ EV + L+HPN+VKL Y L +V EF+
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFV 103
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL----- 109
P G L + L + P+ W+V++++ + A G+ ++ + +++RD ++ NI L
Sbjct: 104 PCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 110 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGVV 167
+A AK++DFGL++ H + ++G + APE + T K+D YSF ++
Sbjct: 163 NAPVCAKVADFGLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 168 LLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM-DTKLGGQYPQKAAHTAATL 226
L +L+G D+ G K K ++ + L P+ +
Sbjct: 218 LYTILTGEGPFDEYSYG---------------KIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 227 ALQCLNNEPKLRPRMSEVLAILERL 251
C + +PK RP S ++ L L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGLA+ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLARV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 27/253 (10%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK +KP G + +L E N + L H LVKL + E ++ EFM KGSL +
Sbjct: 42 VAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDF 99
Query: 63 LFRR--GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L QPL + I A+G+ F+ + I+RD +A+NIL+ A K++DF
Sbjct: 100 LKSDEGSKQPLPKLIDFSAQI--AEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVD 179
GLA+ + T + APE + G T KSDV+SFG++L+E+++ GR
Sbjct: 156 GLARVIEDNEYTAREGAKFPIK-WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY- 213
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
P +S+ ++ R ++ P+ + ++C N P+ RP
Sbjct: 214 ---------------PGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 257
Query: 240 RMSEVLAILERLE 252
+ ++L+ E
Sbjct: 258 TFEYIQSVLDDFE 270
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
M+VAVK LK K++ E L L H ++VK G C +G+ ++V+E+M G L
Sbjct: 46 MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 61 NHLFRRGP--------QP------LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
L GP QP L + + +A A G+ +L A ++RD N
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATRN 163
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGV 166
L+ A K+ DFG+++ + D V M + PE + + TT+SDV+SFGV
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
Query: 167 VLLELLS 173
+L E+ +
Sbjct: 224 ILWEIFT 230
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 47 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 106 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 160
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 161 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 218
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 219 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 261
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 262 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 294
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 64 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 123 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 177
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 178 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 235
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 236 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 278
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 279 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 311
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GFVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 74 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 133 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 187
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 188 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 246 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 288
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 289 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 321
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
++VAVK LK K++ E L L H ++VK G C+EG+ ++V+E+M G L
Sbjct: 44 ILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 61 NHLFRRGPQP-----------LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 109
L GP L+ + + +A A G+ +L A ++RD N L+
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCLV 161
Query: 110 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 169
K+ DFG+++ + D V M + PE + + TT+SDV+S GVVL
Sbjct: 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 221
Query: 170 ELLS-GRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
E+ + G+ +P+ LS+ + I ++ Q P+ L
Sbjct: 222 EIFTYGK------------------QPWYQLSNNEVIECITQGRV-LQRPRTCPQEVYEL 262
Query: 227 ALQCLNNEPKLRPRMSEVLAILERL 251
L C EP +R + + +L+ L
Sbjct: 263 MLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 38/265 (14%)
Query: 2 VVAVKKL-------KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 54
VVA+K L + E + +E+ EV + L+HPN+VKL Y L +V EF+
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFV 103
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL----- 109
P G L + L + P+ W+V++++ + A G+ ++ + +++RD ++ NI L
Sbjct: 104 PCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 110 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGVV 167
+A AK++DFG ++ H + ++G + APE + T K+D YSF ++
Sbjct: 163 NAPVCAKVADFGTSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 168 LLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM-DTKLGGQYPQKAAHTAATL 226
L +L+G D+ G K K ++ + L P+ +
Sbjct: 218 LYTILTGEGPFDEYSYG---------------KIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 227 ALQCLNNEPKLRPRMSEVLAILERL 251
C + +PK RP S ++ L L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 133
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 134 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 248
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 249 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 138
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 139 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 196
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 197 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 253
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 254 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 131
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 132 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 189
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 246
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 247 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E+M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL + D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLGRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 38/265 (14%)
Query: 2 VVAVKKL-------KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFM 54
VVA+K L + E + +E+ EV + L+HPN+VKL Y L +V EF+
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFV 103
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL----- 109
P G L + L + P+ W+V++++ + A G+ ++ + +++RD ++ NI L
Sbjct: 104 PCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 110 DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR--LTTKSDVYSFGVV 167
+A AK++DF L++ H + ++G + APE + T K+D YSF ++
Sbjct: 163 NAPVCAKVADFSLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 168 LLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM-DTKLGGQYPQKAAHTAATL 226
L +L+G D+ G K K ++ + L P+ +
Sbjct: 218 LYTILTGEGPFDEYSYG---------------KIKFINMIREEGLRPTIPEDCPPRLRNV 262
Query: 227 ALQCLNNEPKLRPRMSEVLAILERL 251
C + +PK RP S ++ L L
Sbjct: 263 IELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 134
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK--AGPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 135 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV 192
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 249
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 250 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 133
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 134 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 248
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 249 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 134
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 135 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 192
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 249
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 250 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 192
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ FL A + ++RD A N +LD +F K++DFGLA+ D
Sbjct: 193 DLIGFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 307
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 308 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 11/252 (4%)
Query: 2 VVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGS 58
+VAVK LK + G Q W E++ L L+H +++K G C + GE L LV E++P GS
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L ++L R + A + A +G+ +LH I+R+ A N+LLD + K+
Sbjct: 105 LRDYLPRHS---IGLAQLLLFAQQICEGMAYLHS--QHYIHRNLAARNVLLDNDRLVKIG 159
Query: 119 DFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCA 177
DFGLAKA P G + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCD 218
Query: 178 VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
++ L+ A+ ++ R L +++ P K L C E
Sbjct: 219 SSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 238 RPRMSEVLAILE 249
RP ++ IL+
Sbjct: 278 RPTFENLIPILK 289
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 1 MVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VA+K LK G+ + +++L E + +GQ HPN+V L G G+ ++V EFM G+
Sbjct: 72 VAVAIKTLKV-GYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 59 LENHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L+ L + Q + V V + G A G+ +L A+ ++RD A NIL+++ K
Sbjct: 131 LDAFLRKHDGQ---FTVIQLVGMLRGIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCK 185
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+SDFGL++ D V T G + APE + + T+ SDV+S+G+V+ E++S
Sbjct: 186 VSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 244
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
+PY + + + ++ P L L C
Sbjct: 245 G-----------------ERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQK 287
Query: 234 EPKLRPRMSEVLAILERLEAPKNSA 258
E RP+ +++ IL+++ NSA
Sbjct: 288 ERAERPKFEQIVGILDKMIRNPNSA 312
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
M+VAVK LK +++ E L L H ++V+ G C EG L+V+E+M G L
Sbjct: 49 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 61 NHLFRRGPQ-------------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L GP PL + VA A G+ +L A ++RD N
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNC 166
Query: 108 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVV 167
L+ K+ DFG+++ + D V + M + PE + + TT+SDV+SFGVV
Sbjct: 167 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 226
Query: 168 LLELLS 173
L E+ +
Sbjct: 227 LWEIFT 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 48/241 (19%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQP---LSWAVRMK 78
E L HPN++ L G CL+ N LV EF G L L + P ++WAV++
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI- 114
Query: 79 VAIGAAKGLTFLHD-AESQVIYRDFKASNILLDAEFN--------AKLSDFGLAKAGPTG 129
A+G+ +LHD A +I+RD K+SNIL+ + K++DFGLA+
Sbjct: 115 -----ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----- 164
Query: 130 DRTHVSTQV--MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC---AVDKTKVG 184
H +T++ G + + APE + + SDV+S+GV+L ELL+G +D V
Sbjct: 165 -EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223
Query: 185 IEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+ + KL P A L C N +P RP + +
Sbjct: 224 -------------------YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264
Query: 245 L 245
L
Sbjct: 265 L 265
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 11/252 (4%)
Query: 2 VVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGS 58
+VAVK LK + G Q W E++ L L+H +++K G C + GE L LV E++P GS
Sbjct: 45 MVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L ++L R + A + A +G+ +LH I+R+ A N+LLD + K+
Sbjct: 105 LRDYLPRHS---IGLAQLLLFAQQICEGMAYLH--AQHYIHRNLAARNVLLDNDRLVKIG 159
Query: 119 DFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCA 177
DFGLAKA P G + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 160 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCD 218
Query: 178 VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
++ L+ A+ ++ R L +++ P K L C E
Sbjct: 219 SSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 238 RPRMSEVLAILE 249
RP ++ IL+
Sbjct: 278 RPTFENLIPILK 289
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
M+VAVK LK +++ E L L H ++V+ G C EG L+V+E+M G L
Sbjct: 43 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 61 NHLFRRGPQ-------------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L GP PL + VA A G+ +L A ++RD N
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNC 160
Query: 108 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVV 167
L+ K+ DFG+++ + D V + M + PE + + TT+SDV+SFGVV
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 220
Query: 168 LLELLS 173
L E+ +
Sbjct: 221 LWEIFT 226
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K ++ EG ++++ E + +L HP LV+L G CLE LV+EFM G L ++
Sbjct: 34 VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R + + + + +G+ +L E+ VI+RD A N L+ K+SDFG+
Sbjct: 93 L-RTQRGLFAAETLLGMCLDVCEGMAYLE--EASVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 150 TRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D + ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDMGA--VHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG +++ E + +L HP LV+L G CLE LV+EFM G L ++
Sbjct: 54 VAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R + + + + +G+ +L E+ VI+RD A N L+ K+SDFG+
Sbjct: 113 L-RTQRGLFAAETLLGMCLDVCEGMAYLE--EACVIHRDLAARNCLVGENQVIKVSDFGM 169
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 170 TRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 37/263 (14%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK +KP G + +L E N + L H LVKL + E ++ EFM KGSL +
Sbjct: 209 VAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDF 266
Query: 63 LFRR--GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L QPL + I A+G+ F+ + I+RD +A+NIL+ A K++DF
Sbjct: 267 LKSDEGSKQPLPKLIDFSAQI--AEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADF 322
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVD 179
GLA+ G + APE + G T KSDV+SFG++L+E+++ GR
Sbjct: 323 GLARVG-----------AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY- 370
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
P +S+ ++ R ++ P+ + ++C N P+ RP
Sbjct: 371 ---------------PGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 414
Query: 240 RMSEVLAILERLEAPKNSAKLSQ 262
+ ++L+ S Q
Sbjct: 415 TFEYIQSVLDDFYTATESQXQQQ 437
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLEN 61
VAVK +K + + +L E + + QL H NLV+L+G +E + L +V E+M KGSL +
Sbjct: 47 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+L RG L +K ++ + + +L + ++RD A N+L+ + AK+SDFG
Sbjct: 105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 122 LAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
L K A T D + + + APE + + +TKSDV+SFG++L E+ S
Sbjct: 163 LTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 27/250 (10%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK +KP G + +L E N + L H LVKL + E ++ EFM KGSL +
Sbjct: 215 VAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDF 272
Query: 63 LFRR--GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L QPL + I A+G+ F+ + I+RD +A+NIL+ A K++DF
Sbjct: 273 LKSDEGSKQPLPKLIDFSAQI--AEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADF 328
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVD 179
GLA+ + T + APE + G T KSDV+SFG++L+E+++ GR
Sbjct: 329 GLARVIEDNEYTAREGAKFPIK-WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY- 386
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
P +S+ ++ R ++ P+ + ++C N P+ RP
Sbjct: 387 ---------------PGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 430
Query: 240 RMSEVLAILE 249
+ ++L+
Sbjct: 431 TFEYIQSVLD 440
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLEN 61
VAVK +K + + +L E + + QL H NLV+L+G +E + L +V E+M KGSL +
Sbjct: 32 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+L RG L +K ++ + + +L + ++RD A N+L+ + AK+SDFG
Sbjct: 90 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFG 147
Query: 122 LAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
L K A T D + + + APE + + +TKSDV+SFG++L E+ S
Sbjct: 148 LTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLEN 61
VAVK +K + + +L E + + QL H NLV+L+G +E + L +V E+M KGSL +
Sbjct: 219 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+L RG L +K ++ + + +L + ++RD A N+L+ + AK+SDFG
Sbjct: 277 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFG 334
Query: 122 LAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
L K A T D + + + APE + + +TKSDV+SFG++L E+ S
Sbjct: 335 LTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K ++ EG ++++ E + +L HP LV+L G CLE LV+EFM G L ++
Sbjct: 32 VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R + + + + +G+ +L +A VI+RD A N L+ K+SDFG+
Sbjct: 91 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGM 147
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 148 TRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
M+VAVK LK +++ E L L H ++V+ G C EG L+V+E+M G L
Sbjct: 72 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 61 NHLFRRGPQ-------------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L GP PL + VA A G+ +L A ++RD N
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNC 189
Query: 108 LLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVV 167
L+ K+ DFG+++ + D V + M + PE + + TT+SDV+SFGVV
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 168 LLELLS 173
L E+ +
Sbjct: 250 LWEIFT 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K ++ EG ++++ E + +L HP LV+L G CLE LV+EFM G L ++
Sbjct: 34 VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R + + + + +G+ +L +A VI+RD A N L+ K+SDFG+
Sbjct: 93 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 150 TRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E M GSL+
Sbjct: 47 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 106 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 160
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 161 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 218
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 219 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 261
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 262 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 294
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 11/252 (4%)
Query: 2 VVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGS 58
+VAVK LK + H+ W E++ L L+H +++K G C + G L LV E++P GS
Sbjct: 62 MVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L ++L R + A + A +G+ +LH I+RD A N+LLD + K+
Sbjct: 122 LRDYLPRHS---IGLAQLLLFAQQICEGMAYLH--AQHYIHRDLAARNVLLDNDRLVKIG 176
Query: 119 DFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCA 177
DFGLAKA P G + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 177 DFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCD 235
Query: 178 VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
++ L+ A+ ++ R L +++ P K L C E
Sbjct: 236 SSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPAEVYHLMKNCWETEASF 294
Query: 238 RPRMSEVLAILE 249
RP ++ IL+
Sbjct: 295 RPTFENLIPILK 306
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K ++ EG ++++ E + +L HP LV+L G CLE LV+EFM G L ++
Sbjct: 37 VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R + + + + +G+ +L +A VI+RD A N L+ K+SDFG+
Sbjct: 96 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGM 152
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 153 TRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 29/270 (10%)
Query: 1 MVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VA+K LK G+ + +++L+E + +GQ HPN++ L G + + +++ E+M GS
Sbjct: 58 ICVAIKTLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 116
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L+ L R+ + + + G G+ +L D + ++RD A NIL+++ K+S
Sbjct: 117 LDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKVS 173
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFG+++ D + G + APE +A + T+ SDV+S+G+V+ E++S
Sbjct: 174 DFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 231
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + ++ P L L C E
Sbjct: 232 -----------------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKE 274
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSE 264
RP+ +++ +L++L NS K + SE
Sbjct: 275 RSDRPKFGQIVNMLDKLIRNPNSLKRTGSE 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 33/273 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN+++L G + + ++V E M GSL+
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L + Q + V V + G A G+ +L D ++RD A NIL+++ K+S
Sbjct: 135 SFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + +PE +A + T+ SDV+S+G+VL E++S
Sbjct: 190 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + +D P L L C +
Sbjct: 248 -----------------ERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHR 267
RP+ ++++IL++L S K+ S R
Sbjct: 291 RNNRPKFEQIVSILDKLIRNPGSLKIITSAAAR 323
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 1 MVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VA+K LK G+ + +++L+E + +GQ HPN++ L G + +++ EFM GS
Sbjct: 62 IFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L++ L R+ + + + G A G+ +L A+ ++RD A NIL+++ K+S
Sbjct: 121 LDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 119 DFGLAK--AGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
DFGL++ T D T+ T +G + APE + + T+ SDV+S+G+V+ E++S
Sbjct: 178 DFGLSRFLEDDTSDPTY--TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 232
+PY + + ++ P L L C
Sbjct: 236 YG-----------------ERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQ 278
Query: 233 NEPKLRPRMSEVLAILERLEAPKNSAK 259
+ RP+ +++ L+++ NS K
Sbjct: 279 KDRNHRPKFGQIVNTLDKMIRNPNSLK 305
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 12/173 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLEN 61
VAVK +K + + +L E + + QL H NLV+L+G +E + L +V E+M KGSL +
Sbjct: 38 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+L RG L +K ++ + + +L + ++RD A N+L+ + AK+SDFG
Sbjct: 96 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFG 153
Query: 122 LAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
L K A T D + + + APE + +TKSDV+SFG++L E+ S
Sbjct: 154 LTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 27/256 (10%)
Query: 2 VVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VA+K LK G+ + +E+L+E + +GQ HPN+++L G +++ EFM G+L
Sbjct: 46 CVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++ L R + + + G A G+ +L AE ++RD A NIL+++ K+SD
Sbjct: 105 DSFL-RLNDGQFTVIQLVGMLRGIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSD 161
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
FGL++ T +G + APE +A + T+ SD +S+G+V+ E++S
Sbjct: 162 FGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG- 220
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
+PY + + ++ P + L L C +
Sbjct: 221 ----------------ERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDR 264
Query: 236 KLRPRMSEVLAILERL 251
RPR +V++ L+++
Sbjct: 265 NARPRFPQVVSALDKM 280
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 29/270 (10%)
Query: 1 MVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VA+K LK G+ + +++L+E + +GQ HPN++ L G + + +++ E+M GS
Sbjct: 37 ICVAIKTLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 95
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L+ L R+ + + + G G+ +L D ++RD A NIL+++ K+S
Sbjct: 96 LDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--SYVHRDLAARNILVNSNLVCKVS 152
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFG+++ D + G + APE +A + T+ SDV+S+G+V+ E++S
Sbjct: 153 DFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + ++ P L L C E
Sbjct: 211 -----------------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKE 253
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSE 264
RP+ +++ +L++L NS K + SE
Sbjct: 254 RSDRPKFGQIVNMLDKLIRNPNSLKRTGSE 283
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 27/256 (10%)
Query: 2 VVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VA+K LK G+ + +E+L+E + +GQ HPN+++L G +++ EFM G+L
Sbjct: 44 CVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++ L R + + + G A G+ +L AE ++RD A NIL+++ K+SD
Sbjct: 103 DSFL-RLNDGQFTVIQLVGMLRGIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSD 159
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
FGL++ T +G + APE +A + T+ SD +S+G+V+ E++S
Sbjct: 160 FGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG- 218
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
+PY + + ++ P + L L C +
Sbjct: 219 ----------------ERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDR 262
Query: 236 KLRPRMSEVLAILERL 251
RPR +V++ L+++
Sbjct: 263 NARPRFPQVVSALDKM 278
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 29/270 (10%)
Query: 1 MVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VA+K LK G+ + +++L+E + +GQ HPN++ L G + + +++ E+M GS
Sbjct: 43 ICVAIKTLKA-GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 101
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L+ L R+ + + + G G+ +L D ++RD A NIL+++ K+S
Sbjct: 102 LDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--SYVHRDLAARNILVNSNLVCKVS 158
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFG+++ D + G + APE +A + T+ SDV+S+G+V+ E++S
Sbjct: 159 DFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 216
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + ++ P L L C E
Sbjct: 217 -----------------ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKE 259
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSE 264
RP+ +++ +L++L NS K + SE
Sbjct: 260 RSDRPKFGQIVNMLDKLIRNPNSLKRTGSE 289
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 37 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 GLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 205
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 206 --YGM--------SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 255
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 256 SFAEIHQAFETM 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 35/256 (13%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK +K EG E+ E + +L HP LVK G C + +V E++ G L N+
Sbjct: 35 VAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L G + L + +++ +G+ FL Q I+RD A N L+D + K+SDFG+
Sbjct: 94 LRSHG-KGLEPSQLLEMCYDVCEGMAFLES--HQFIHRDLAARNCLVDRDLCVKVSDFGM 150
Query: 123 AKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAV 178
+ D +VS+ +GT ++APE + ++KSDV++FG+++ E+ S G+
Sbjct: 151 TRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
Query: 179 D---KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
D ++V ++ +S +L+R P A+ T + C + P
Sbjct: 207 DLYTNSEVVLK----------VSQGHRLYR----------PHLASDTIYQIMYSCWHELP 246
Query: 236 KLRPRMSEVLAILERL 251
+ RP ++L+ +E L
Sbjct: 247 EKRPTFQQLLSSIEPL 262
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K ++ EG ++++ E + +L HP LV+L G CLE LV EFM G L ++
Sbjct: 35 VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R + + + + +G+ +L +A VI+RD A N L+ K+SDFG+
Sbjct: 94 L-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ D+ ST +A+PE + R ++KSDV+SFGV++ E+ S
Sbjct: 151 TRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 128/267 (47%), Gaps = 24/267 (8%)
Query: 3 VAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K LK + + ++L E +GQ H N+++L G + + +++ E+M G+L+
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
L R S + + G A G+ +L A ++RD A NIL+++ K+SDFG
Sbjct: 136 FL-REKDGEFSVLQLVGMLRGIAAGMKYL--ANMNYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 122 LAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
L++ + T+ ++ + APE ++ + T+ SDV+SFG+V+ E+++
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG----- 247
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
+PY ++ + ++ P L +QC E RP
Sbjct: 248 ------------ERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRP 295
Query: 240 RMSEVLAILERL-EAPKNSAKLSQSEP 265
+ +++++IL++L AP + L+ +P
Sbjct: 296 KFADIVSILDKLIRAPDSLKTLADFDP 322
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 37 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 GLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 205
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 206 --YGM--------SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 255
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 256 SFAEIHQAFETM 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 103 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 161 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 212
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 213 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 156 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 207
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 208 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 258 SFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 156 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 207
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 208 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 258 SFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 156 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 207
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 208 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 258 SFAEIHQAFETM 269
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 132
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKA--GPTGDRT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+
Sbjct: 133 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV 190
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 247
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 248 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 130
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 131 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 188
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 245
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 246 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 156 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 207
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 208 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 258 SFAEIHQAFETM 269
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 152
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 153 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 210
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 211 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 267
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 268 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 37 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 154 GLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 205
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 206 --YGM--------SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 255
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 256 SFAEIHQAFETM 267
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 133
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 134 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 191
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 248
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 249 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 128
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 129 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 243
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 244 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 133
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 134 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 191
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 248
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 249 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 151
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 152 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 209
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 210 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 266
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 267 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 125
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 126 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 183
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 184 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 240
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 241 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 132
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 133 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 190
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 247
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 248 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 26/234 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-LLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
++LTE + HPN++ L+G CL E L+V +M G L N + P V+
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVK 131
Query: 77 MKVAIG--AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD--RT 132
+ G AKG+ +L A + ++RD A N +LD +F K++DFGLA+ +
Sbjct: 132 DLIGFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 189
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW 192
H T + A E + T + TTKSDV+SFGV+L EL++ R A V V
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITV-- 246
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
YL R+L + P+ + L+C + + ++RP SE+++
Sbjct: 247 ---YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 40 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 157 GLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 208
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 209 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 258
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 259 SFAEIHQAFETM 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 161 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 212
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 213 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 47/276 (17%)
Query: 2 VVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VAVK LK E + ++ E + + +PN+VKL+G C G+ L++E+M G L
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL- 137
Query: 61 NHLFRR-----------------------GPQPLSWAVRMKVAIGAAKGLTFLHDAESQV 97
N R GP PLS A ++ +A A G+ +L +E +
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL--SERKF 195
Query: 98 IYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT 157
++RD N L+ K++DFGL++ + D + PE + R TT
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT 255
Query: 158 KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQY 215
+SDV+++GVVL E+ S G++ PY ++ + ++ + D +
Sbjct: 256 ESDVWAYGVVLWEIFS---------YGLQ--------PYYGMAHEEVIYYVRDGNILAC- 297
Query: 216 PQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
P+ L C + P RP + IL+R+
Sbjct: 298 PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 161 GLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 212
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 213 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 161 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 212
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 213 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 33/257 (12%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK G+ + +++L E + +GQ HPN++ L G + + ++V E+M GSL+
Sbjct: 53 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 111
Query: 61 NHLFRRGPQPLSWAVRMKVAI--GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L + Q + V V + G + G+ +L D ++RD A NIL+++ K+S
Sbjct: 112 TFLKKNDGQ---FTVIQLVGMLRGISAGMKYLSDM--GYVHRDLAARNILINSNLVCKVS 166
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
DFGL++ D + G + APE +A + T+ SDV+S+G+V+ E++S
Sbjct: 167 DFGLSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG 224
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+PY + + + ++ P L L C E
Sbjct: 225 -----------------ERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKE 267
Query: 235 PKLRPRMSEVLAILERL 251
RP+ E++ +L++L
Sbjct: 268 RNSRPKFDEIVNMLDKL 284
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 161 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 212
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 213 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 263 SFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 43 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 102 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 159
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 160 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 211
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 212 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 261
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 262 SFAEIHQAFETM 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 156 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 207
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 208 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 258 SFAEIHQAFETM 269
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 246 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q +S V + +A + + +L + I+R+ A N L+ K++DF
Sbjct: 305 DYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADF 362
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 363 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 414
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 415 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 465 SFAEIHQAFETM 476
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 40 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 157 GLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 208
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 209 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 258
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 259 SFAEIHQAFETM 270
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 31/267 (11%)
Query: 1 MVVAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VA+K LK G+ + +++L+E + +GQ HPN++ L G + +++ EFM GS
Sbjct: 36 IFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 94
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L++ L R+ + + + G A G+ +L A+ ++R A NIL+++ K+S
Sbjct: 95 LDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRALAARNILVNSNLVCKVS 151
Query: 119 DFGLAK--AGPTGDRTHVSTQVMGTH---GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
DFGL++ T D T+ T +G + APE + + T+ SDV+S+G+V+ E++S
Sbjct: 152 DFGLSRFLEDDTSDPTY--TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 232
+PY + + ++ P L L C
Sbjct: 210 YG-----------------ERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQ 252
Query: 233 NEPKLRPRMSEVLAILERLEAPKNSAK 259
+ RP+ +++ L+++ NS K
Sbjct: 253 KDRNHRPKFGQIVNTLDKMIRNPNSLK 279
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 41 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 158 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 209
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 210 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 260 SFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 41 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 158 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 209
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 210 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 260 SFAEIHQAFETM 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 156 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 207
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 208 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 258 SFAEIHQAFETM 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 41 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 158 GLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 209
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 210 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 259
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 260 SFAEIHQAFETM 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 52 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 111 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHLVKVADF 168
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 169 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 220
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 221 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 270
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 271 SFAEIHQAFETM 282
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 285 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+R+ A N L+ K++DF
Sbjct: 344 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADF 401
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 402 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 453
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 454 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 503
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 504 SFAEIHQAFETM 515
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ EF+P GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 104 REYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 161 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C ++ EFM G+L
Sbjct: 243 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L Q ++ V + +A + + +L + I+R+ A N L+ K++DF
Sbjct: 302 DYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVGENHLVKVADF 359
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDK 180
GL++ TGD + APE +A + + KSDV++FGV+L E+ +
Sbjct: 360 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------- 411
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
G+ PY D +++ +++ + P+ L C P RP
Sbjct: 412 --YGM--------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 461
Query: 240 RMSEVLAILERL 251
+E+ E +
Sbjct: 462 SFAEIHQAFETM 473
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 100 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 156
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 157 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 101 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 158 FGLTKVLPQ-DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 101 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 158 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 105 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 161
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 162 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 39 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 99 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 155
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 156 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 104 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 161 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 101 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 157
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 158 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 46 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 106 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 162
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 163 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 48 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 108 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 164
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 165 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 47 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 107 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 163
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 164 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 132 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 188
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 189 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 119 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 175
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 176 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 119 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 175
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 176 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 35 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDF 92
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 93 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 144
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
++DFGLA+ + T + APE GR T KSDV+SFG++L EL +
Sbjct: 145 VADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTT--- 200
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
K +V PY R++ ++ P + + L QC EP
Sbjct: 201 ---KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 246
Query: 236 KLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
+ RP + A LE + +EP Q G
Sbjct: 247 EERPTFEYLQAFLEDY--------FTSTEPQYQPG 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 46 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 102
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 103 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 159
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 160 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 48 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 104
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 105 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 161
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 162 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 96
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 97 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 154 GLARLIEDAEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L ++ + + ++ KG+ +L + I+R+ NIL++ E K+ D
Sbjct: 102 RDYL-QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYIHRNLATRNILVENENRVKIGD 158
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + + G + APE + + + SDV+SFGVVL EL +
Sbjct: 159 FGLTKVLPQ-DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 38 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 95
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 96 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 147
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 148 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 203
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC E
Sbjct: 204 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 249 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 276
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 43/273 (15%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK LK ++ L+E N L Q++HP+++KL G C + LL+ E+ GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 62 HL---FRRGP-------------------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIY 99
L + GP + L+ + A ++G+ +L AE ++++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVH 173
Query: 100 RDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS 159
RD A NIL+ K+SDFGL++ D +Q + A E + TT+S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 160 DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQK 218
DV+SFGV+L E+++ +G PY +LF ++ T + P
Sbjct: 234 DVWSFGVLLWEIVT---------LG--------GNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 219 AAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ L LQC EP RP +++ LE++
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 49 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 105
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 106 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 162
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 163 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 41 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 97
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 98 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 154
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 155 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 42 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 98
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 99 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 155
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 156 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 50 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 106
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 107 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 163
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 164 GLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 96
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 97 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 154 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 294 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 351
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 352 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 403
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 404 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 459
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC E
Sbjct: 460 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 505 PEERPTFEYLQAFLEDY--------FTSTEPQXQPG 532
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+ VAVK LK + + +E+L E + ++ HPNLV+L+G C +V E+MP G+L
Sbjct: 58 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
++L + ++ V + +A + + +L + I+RD A N L+ K++DF
Sbjct: 117 DYLRECNREEVTAVVLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADF 174
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 171
GL++ TGD + APE +A + KSDV++FGV+L E+
Sbjct: 175 GLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 96
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 97 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 154 GLARLIEDNEXTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 46 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 102
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 103 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 159
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 160 GLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 43/273 (15%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK LK ++ L+E N L Q++HP+++KL G C + LL+ E+ GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 62 HL---FRRGP-------------------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIY 99
L + GP + L+ + A ++G+ +L AE +++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVH 173
Query: 100 RDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS 159
RD A NIL+ K+SDFGL++ D +Q + A E + TT+S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 160 DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQK 218
DV+SFGV+L E+++ +G PY +LF ++ T + P
Sbjct: 234 DVWSFGVLLWEIVT---------LG--------GNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 219 AAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ L LQC EP RP +++ LE++
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 45 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 101
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 102 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 158
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 159 GLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Query: 2 VVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGS 58
+VAVK LK G Q W E+ L L+H ++VK G C + GE + LV E++P GS
Sbjct: 40 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 99
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L ++L R + A + A +G+ +LH I+R A N+LLD + K+
Sbjct: 100 LRDYLPR---HCVGLAQLLLFAQQICEGMAYLH--AQHYIHRALAARNVLLDNDRLVKIG 154
Query: 119 DFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCA 177
DFGLAKA P G + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 155 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT-YCD 213
Query: 178 VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
+++ L+ + ++ R L +++ P + L C E
Sbjct: 214 SNQSPHTKFTELIGHTQGQMTVLR-LTELLERGERLPRPDRCPCEIYHLMKNCWETEASF 272
Query: 238 RPRMSEVLAILE 249
RP ++ IL+
Sbjct: 273 RPTFQNLVPILQ 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Query: 2 VVAVKKLKPE-GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGS 58
+VAVK LK G Q W E+ L L+H ++VK G C + GE + LV E++P GS
Sbjct: 39 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 98
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L ++L R + A + A +G+ +LH I+R A N+LLD + K+
Sbjct: 99 LRDYLPR---HCVGLAQLLLFAQQICEGMAYLH--AQHYIHRALAARNVLLDNDRLVKIG 153
Query: 119 DFGLAKAGPTGDRTH-VSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCA 177
DFGLAKA P G + V + APE + + SDV+SFGV L ELL+ C
Sbjct: 154 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT-YCD 212
Query: 178 VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
+++ L+ + ++ R L +++ P + L C E
Sbjct: 213 SNQSPHTKFTELIGHTQGQMTVLR-LTELLERGERLPRPDRCPCEIYHLMKNCWETEASF 271
Query: 238 RPRMSEVLAILE 249
RP ++ IL+
Sbjct: 272 RPTFQNLVPILQ 283
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 43/273 (15%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK LK ++ L+E N L Q++HP+++KL G C + LL+ E+ GSL
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 62 HL---FRRGP-------------------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIY 99
L + GP + L+ + A ++G+ +L AE ++++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVH 173
Query: 100 RDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS 159
RD A NIL+ K+SDFGL++ D +Q + A E + TT+S
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 160 DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQK 218
DV+SFGV+L E+++ +G PY +LF ++ T + P
Sbjct: 234 DVWSFGVLLWEIVT---------LG--------GNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 219 AAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ L LQC EP RP +++ LE++
Sbjct: 277 CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 35 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 91
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 92 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 148
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 149 GLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 40 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 96
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+RD +A+NIL+ + K++DF
Sbjct: 97 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 154 GLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEG--ENRLLVYEFMPKGSL 59
VVAVKKL+ + +++ E+ L L H N+VK G C N L+ E++P GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
++L + + + ++ KG+ +L + I+RD NIL++ E K+ D
Sbjct: 104 RDYL-QAHAERIDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGD 160
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL K P D+ + G + APE + + + SDV+SFGVVL EL +
Sbjct: 161 FGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 211 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 320
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 321 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 376
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC E
Sbjct: 377 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 422 PEERPTFEYLQAFLEDY--------FTSTEPQXQPG 449
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 211 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 320
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 321 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 376
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC E
Sbjct: 377 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 422 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 449
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
++DFGLA+ + T + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTT--- 210
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
K +V PY R++ ++ P + + L QC +P
Sbjct: 211 ---KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 236 KLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
+ RP + A LE + +EP Q G
Sbjct: 257 EERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 36 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 93
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 94 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 145
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 146 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 201
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 202 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 247 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 274
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 34 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 91
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 92 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 143
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 144 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 199
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 200 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 245 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 272
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 230
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 231 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 288 IKEEMEPGFREVSFYYSEENK 308
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 221
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 222 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 278
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 279 IKEEMEPGFREVSFYYSEENK 299
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 211 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDF 268
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 320
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 321 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 376
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC E
Sbjct: 377 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 422 PEERPTFEYLQAFLEDY--------FTSTEPQXQPG 449
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 42 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + + ++ + + + ++H RD +A+NIL+ K
Sbjct: 100 LKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 151
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 152 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 207
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC E
Sbjct: 208 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 253 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 280
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 31/269 (11%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 36 VAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 93
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L + L + +A A G+ ++ I+RD +++NIL+ K++DFGL
Sbjct: 94 LKDGEGRALKLPNLVDMAAQVAAGMAYIE--RMNYIHRDLRSANILVGNGLICKIADFGL 151
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTK 182
A+ + T + APE GR T KSDV+SFG++L EL V K +
Sbjct: 152 ARLIEDNEXTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTEL------VTKGR 204
Query: 183 VGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM 241
V PY + R++ ++ PQ + L + C +P+ RP
Sbjct: 205 V-----------PYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 253
Query: 242 SEVLAILERLEAPKNSAKLSQSEPHRQTG 270
+ + LE + +EP Q G
Sbjct: 254 EYLQSFLEDY--------FTATEPQYQPG 274
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 42 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + + ++ + + + ++H RD +A+NIL+ K
Sbjct: 100 LKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 151
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
++DFGLA+ + T + APE GR T KSDV+SFG++L EL +
Sbjct: 152 VADFGLARLIEDNEWTARQGAKFPIK-WTAPEAALYGRFTIKSDVWSFGILLTELTT--- 207
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
K +V PY R++ ++ P + + L QC EP
Sbjct: 208 ---KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 253
Query: 236 KLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
+ RP + A LE + +EP Q G
Sbjct: 254 EERPTFEYLQAFLEDY--------FTSTEPQYQPG 280
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 32/267 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 229
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 230 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 286
Query: 247 ILERLEAPKNSAKLSQSEPHR-QTGPV 272
I E +E SE ++ + PV
Sbjct: 287 IKEEMEPGFREVSFYYSEENKMENNPV 313
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + ++ H LV+L E E +V E+M KGSL +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%), Gaps = 31/265 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 236
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 237 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 247 ILERLEAPKNSAKLSQSEPHRQTGP 271
I E +E SE ++ P
Sbjct: 294 IKEEMEPGFREVSFYYSEENKLPEP 318
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
K + EV+ QL H N+V +I E + LV E++ +L ++ GP + A+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
I G+ HD ++++RD K NIL+D+ K+ DFG+AKA T +
Sbjct: 116 FTNQI--LDGIKHAHDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TN 170
Query: 137 QVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGR 175
V+GT Y +PE A G T + +D+YS G+VL E+L G
Sbjct: 171 HVLGTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KG L +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 223
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 224 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 280
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 281 IKEEMEPGFREVSFYYSEENK 301
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LK +G +L E N + QL H LV+L + E ++ E+M GSL +
Sbjct: 36 VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD- 92
Query: 63 LFRRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
F + P + + + +A A+G+ F+ E I+R+ +A+NIL+ + K++DF
Sbjct: 93 -FLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIHRNLRAANILVSDTLSCKIADF 149
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GLA+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 150 GLARLIEDNEYTAREGAKFPIK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 229
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 230 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 286
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 287 IKEEMEPGFREVSFYYSEENK 307
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 230
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 231 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 288 IKEEMEPGFREVSFYYSEENK 308
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 227
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 228 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 284
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 285 IKEEMEPGFREVSFYYSEENK 305
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLAAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 130
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 187
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 188 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 130
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 187
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 188 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 120
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 121 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 177
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 178 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 114
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 115 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 171
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 172 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 128
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 129 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 185
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 186 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 110
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 111 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 167
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 168 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 108
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 109 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 165
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 166 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNII 472
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 473 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 529
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 530 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KG L +
Sbjct: 45 VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDF 102
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGLA+ D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 155 VADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 210
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 211 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 256 PEERPTFEYLQAFLEDY--------FTSTEPQYQPG 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 30/242 (12%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + ++V+L+G +G+ L+V E M G L+++L P+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P + +++A A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + APE + G TT SD++SFGVVL E+ SL
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSL 228
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 247
+ +PY LS+++ L +MD Q P L C PK+RP E++ +
Sbjct: 229 AE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 248 LE 249
L+
Sbjct: 286 LK 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 258
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 259 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 315
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 316 IKEEMEPGFREVSFYYSEENK 336
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNII 473
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D + Q
Sbjct: 474 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQ 530
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 531 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 111/266 (41%), Gaps = 37/266 (13%)
Query: 3 VAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VAVK LK KE L +++LGQ H N+V L+G C G L++ E+ G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 59 LENHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L N L R+ P L ++ + + A+G+ FL A I+RD A
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAA 194
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+LL AK+ DFGLA+ V + APE + T +SDV+S+
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAA 224
G++L E+ S +G+ P + K ++++ P A
Sbjct: 255 GILLWEIFS---------LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIY 299
Query: 225 TLALQCLNNEPKLRPRMSEVLAILER 250
++ C EP RP ++ + L+
Sbjct: 300 SIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 30/242 (12%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + ++V+L+G +G+ L+V E M G L+++L P+
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P + +++A A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + APE + G TT SD++SFGVVL E+ SL
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSL 225
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 247
+ +PY LS+++ L +MD Q P L C PK+RP E++ +
Sbjct: 226 AE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 282
Query: 248 LE 249
L+
Sbjct: 283 LK 284
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 2 VVAVKKLKPEGFQGHKE--WL-TEVNYLGQL-HHPNLVKLIGYCLEGENRLL-VYEFMPK 56
+ A+K +K E ++ W+ TE + Q +HP LV L C + E+RL V E++
Sbjct: 47 IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNG 105
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
G L H+ R+ P A I A L +LH E +IYRD K N+LLD+E + K
Sbjct: 106 GDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIK 161
Query: 117 LSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
L+D+G+ K G GD T + GT Y APE + D ++ GV++ E+++GR
Sbjct: 162 LTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 176 CAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEP 235
D VG + P + + LF+++ K + P+ + AA++ LN +P
Sbjct: 219 SPFD--IVGSSDN------PDQNTEDYLFQVILEK-QIRIPRSMSVKAASVLKSFLNKDP 269
Query: 236 KLR 238
K R
Sbjct: 270 KER 272
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 31/265 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 236
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 237 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 247 ILERLEAPKNSAKLSQSEPHRQTGP 271
I E +E SE ++ P
Sbjct: 294 IKEEMEPGFREVSFYYSEENKLPEP 318
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 31/260 (11%)
Query: 3 VAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VAVK LK KE L +++LGQ H N+V L+G C G L++ E+ G
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 59 LENHLFRRGP--------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 110
L N L R+ +PL + + A+G+ FL A I+RD A N+LL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLT 186
Query: 111 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 170
AK+ DFGLA+ V + APE + T +SDV+S+G++L E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 171 LLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 230
+ S +G+ P + K ++++ P A ++ C
Sbjct: 247 IFS---------LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 291
Query: 231 LNNEPKLRPRMSEVLAILER 250
EP RP ++ + L+
Sbjct: 292 WALEPTHRPTFQQICSFLQE 311
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 30 HHPNLVKLIGYCLEGENRLL-VYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
+HP LV L C + E+RL V E++ G L H+ R+ P A I A L
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LN 120
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAP 147
+LH E +IYRD K N+LLD+E + KL+D+G+ K G GD T + GT Y AP
Sbjct: 121 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 175
Query: 148 EYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM 207
E + D ++ GV++ E+++GR D VG + P + + LF+++
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD--IVGSSDN------PDQNTEDYLFQVI 227
Query: 208 DTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
K + P+ + AA++ LN +PK R
Sbjct: 228 LEK-QIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 31/260 (11%)
Query: 3 VAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VAVK LK KE L +++LGQ H N+V L+G C G L++ E+ G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 59 LENHLFRRGP--------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 110
L N L R+ +PL + + A+G+ FL A I+RD A N+LL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLT 194
Query: 111 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 170
AK+ DFGLA+ V + APE + T +SDV+S+G++L E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 171 LLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 230
+ S +G+ P + K ++++ P A ++ C
Sbjct: 255 IFS---------LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 299
Query: 231 LNNEPKLRPRMSEVLAILER 250
EP RP ++ + L+
Sbjct: 300 WALEPTHRPTFQQICSFLQE 319
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 89/153 (58%), Gaps = 14/153 (9%)
Query: 26 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKVA 80
+G L H ++V+L+G C G + LV +++P GSL +H+ + GPQ L +W V++
Sbjct: 87 IGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 142
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
AKG+ +L E +++R+ A N+LL + +++DFG+A P D+ + ++
Sbjct: 143 ---AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ A E + G+ T +SDV+S+GV + EL++
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 30 HHPNLVKLIGYCLEGENRLL-VYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
+HP LV L C + E+RL V E++ G L H+ R+ P A I A L
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LN 167
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT-GDRTHVSTQVMGTHGYAAP 147
+LH E +IYRD K N+LLD+E + KL+D+G+ K G GD T + GT Y AP
Sbjct: 168 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAP 222
Query: 148 EYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM 207
E + D ++ GV++ E+++GR D VG + P + + LF+++
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD--IVGSSDN------PDQNTEDYLFQVI 274
Query: 208 DTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
K + P+ + AA++ LN +PK R
Sbjct: 275 LEK-QIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 30 HHPNLVKLIGYCLEGENRLL-VYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
+HP LV L C + E+RL V E++ G L H+ R+ P A I A L
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LN 124
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAG-PTGDRTHVSTQVMGTHGYAAP 147
+LH E +IYRD K N+LLD+E + KL+D+G+ K G GD T + GT Y AP
Sbjct: 125 YLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 179
Query: 148 EYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIM 207
E + D ++ GV++ E+++GR D VG + P + + LF+++
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD--IVGSSDN------PDQNTEDYLFQVI 231
Query: 208 DTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
K + P+ + AA++ LN +PK R
Sbjct: 232 LEK-QIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 123/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N + +F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 223
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 224 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 280
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 281 IKEEMEPGFREVSFYYSEENK 301
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 89/153 (58%), Gaps = 14/153 (9%)
Query: 26 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQPL-SWAVRMKVA 80
+G L H ++V+L+G C G + LV +++P GSL +H+ + GPQ L +W V++
Sbjct: 69 IGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 124
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
AKG+ +L E +++R+ A N+LL + +++DFG+A P D+ + ++
Sbjct: 125 ---AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ A E + G+ T +SDV+S+GV + EL++
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 123/261 (47%), Gaps = 31/261 (11%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + + + ++V+L+G +G+ L++ E M +G L+++L P
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P S + +++A A G+ +L+ ++ ++RD A N ++ +F K+ DFG+ +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + +PE + G TT SDV+SFGVVL E+ +L
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 226
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-A 246
+ +PY LS+++ L +M+ L + P L C PK+RP E++ +
Sbjct: 227 AE--QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 283
Query: 247 ILERLEAPKNSAKLSQSEPHR 267
I E +E SE ++
Sbjct: 284 IKEEMEPGFREVSFYYSEENK 304
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K LKP G + +L E + +L H LV+L E E +V E+M KGSL +
Sbjct: 212 VAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 269
Query: 63 L------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + R PQ + A ++ + + + ++H RD +A+NIL+ K
Sbjct: 270 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH--------RDLRAANILVGENLVCK 321
Query: 117 LSDFGLAKAGPTGDRTHVSTQ-VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
++DFGL + D + + Q + APE GR T KSDV+SFG++L EL +
Sbjct: 322 VADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-- 377
Query: 176 CAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
K +V PY R++ ++ P + + L QC +
Sbjct: 378 ----KGRV-----------PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 235 PKLRPRMSEVLAILERLEAPKNSAKLSQSEPHRQTG 270
P+ RP + A LE + +EP Q G
Sbjct: 423 PEERPTFEYLQAFLEDY--------FTSTEPQXQPG 450
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 14/161 (8%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
E L E N + QL +P +V++IG C E E+ +LV E G L +L + + + +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNII 114
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ + G+ +L ES ++RD A N+LL + AK+SDFGL+KA D Q
Sbjct: 115 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENXYKAQ 171
Query: 138 VMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
THG + APE + + ++KSDV+SFGV++ E S
Sbjct: 172 ---THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 18/154 (11%)
Query: 29 LHHPNLVKLIGYCL--EGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG--AA 84
L+HPN++ LIG L EG +L+ +M G L F R PQ + V+ ++ G A
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQ--FIRSPQR-NPTVKDLISFGLQVA 134
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG- 143
+G+ +L AE + ++RD A N +LD F K++DFGLA+ DR + S Q H
Sbjct: 135 RGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARD--ILDREYYSVQ-QHRHAR 189
Query: 144 ----YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+ A E + T R TTKSDV+SFGV+L ELL+
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LKP G + +L E N + L H LV+L E ++ E+M KGSL +
Sbjct: 40 VAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L + + + A+G+ ++ I+RD +A+N+L+ K++DFGL
Sbjct: 99 LKSDEGGKVLLPKLIDFSAQIAEGMAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGL 156
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
A+ + T + APE + G T KSDV+SFG++L E+++
Sbjct: 157 ARVIEDNEYTAREGAKFPIK-WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 26/240 (10%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + ++V+L+G +G+ L+V E M G L+++L P+
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P + +++A A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 182
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + APE + G TT SD++SFGVVL E+ SL
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSL 227
Query: 190 VDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILE 249
+ LS+++ L +MD Q P L C PK+RP E++ +L+
Sbjct: 228 AEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 30/242 (12%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + ++V+L+G +G+ L+V E M G L+++L P+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P + +++A A G+ +L+ + ++RD A N ++ +F K+ DFG+ +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 130 DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSL 189
D + + + APE + G TT SD++SFGVVL E+ SL
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------TSL 228
Query: 190 VDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAI 247
+ +PY LS+++ L +MD Q P L C PK+RP E++ +
Sbjct: 229 AE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 248 LE 249
L+
Sbjct: 286 LK 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 31/258 (12%)
Query: 3 VAVKKLKPEG-FQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK + + E+L E + + ++V+L+G +G+ L+V E M G L++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 HLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+L P+ P + +++A A G+ +L+ + ++RD A N ++ +F
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDF 167
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
K+ DFG+ + D + + + APE + G TT SD++SFGVVL E+
Sbjct: 168 TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-- 225
Query: 174 GRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCL 231
SL + +PY LS+++ L +MD Q P L C
Sbjct: 226 -------------TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCW 269
Query: 232 NNEPKLRPRMSEVLAILE 249
P +RP E++ +L+
Sbjct: 270 QFNPNMRPTFLEIVNLLK 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK LKP G + +L E N + L H LV+L + E ++ EFM KGSL +
Sbjct: 39 VAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L + + + A+G+ ++ I+RD +A+N+L+ K++DFGL
Sbjct: 98 LKSDEGGKVLLPKLIDFSAQIAEGMAYIE--RKNYIHRDLRAANVLVSESLMCKIADFGL 155
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
A+ + T + APE + G T KS+V+SFG++L E+++
Sbjct: 156 ARVIEDNEYTAREGAKFPIK-WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIG--YCLEGENRLLVYEFMPKGSL 59
+VAVK+L+ G +++ E+ L LH +VK G Y ++ LV E++P G L
Sbjct: 41 LVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 100
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R + L + + + KG+ +L + ++RD A NIL+++E + K++D
Sbjct: 101 RDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIAD 157
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGLAK P D+ + + G + APE ++ + +SDV+SFGVVL EL +
Sbjct: 158 FGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIG--YCLEGENRLLVYEFMPKGSL 59
+VAVK+L+ G +++ E+ L LH +VK G Y ++ LV E++P G L
Sbjct: 42 LVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 101
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R + L + + + KG+ +L + ++RD A NIL+++E + K++D
Sbjct: 102 RDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIAD 158
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGLAK P D+ + + G + APE ++ + +SDV+SFGVVL EL +
Sbjct: 159 FGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIG--YCLEGENRLLVYEFMPKGSL 59
+VAVK+L+ G +++ E+ L LH +VK G Y ++ LV E++P G L
Sbjct: 54 LVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 113
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R + L + + + KG+ +L + ++RD A NIL+++E + K++D
Sbjct: 114 RDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIAD 170
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGLAK P D+ + + G + APE ++ + +SDV+SFGVVL EL +
Sbjct: 171 FGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 109/270 (40%), Gaps = 39/270 (14%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
M VAVK LKP +E L ++YLG +H N+V L+G C G L++ E+
Sbjct: 70 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 127
Query: 57 GSLENHLFRRGPQPLS----------------WAVRMKVAIGAAKGLTFLHDAESQVIYR 100
G L N L R+ + + + AKG+ FL A I+R
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHR 185
Query: 101 DFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSD 160
D A NILL K+ DFGLA+ V + APE + T +SD
Sbjct: 186 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 245
Query: 161 VYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAA 220
V+S+G+ L EL SL P + K ++++ P+ A
Sbjct: 246 VWSYGIFLWELF---------------SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 290
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILER 250
+ C + +P RP +++ ++E+
Sbjct: 291 AEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
V+ +K+L + + +L EV + L HPN++K IG + + + E++ G+L
Sbjct: 37 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG 96
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+ + W+ R+ A A G+ +LH +I+RD + N L+ N ++DFG
Sbjct: 97 -IIKSMDSQYPWSQRVSFAKDIASGMAYLHSM--NIIHRDLNSHNCLVRENKNVVVADFG 153
Query: 122 LA------KAGPTG-------DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 168
LA K P G DR T V+G + APE + K DV+SFG+VL
Sbjct: 154 LARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
Query: 169 LELLSGRCAVD 179
E++ GR D
Sbjct: 213 CEII-GRVNAD 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 109/270 (40%), Gaps = 39/270 (14%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
M VAVK LKP +E L ++YLG +H N+V L+G C G L++ E+
Sbjct: 54 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 111
Query: 57 GSLENHLFRRGPQPLS----------------WAVRMKVAIGAAKGLTFLHDAESQVIYR 100
G L N L R+ + + + AKG+ FL A I+R
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHR 169
Query: 101 DFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSD 160
D A NILL K+ DFGLA+ V + APE + T +SD
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 229
Query: 161 VYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAA 220
V+S+G+ L EL SL P + K ++++ P+ A
Sbjct: 230 VWSYGIFLWELF---------------SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 274
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILER 250
+ C + +P RP +++ ++E+
Sbjct: 275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 112/272 (41%), Gaps = 43/272 (15%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
M VAVK LKP +E L ++YLG +H N+V L+G C G L++ E+
Sbjct: 72 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 129
Query: 57 GSLENHLFRRGPQPLS----------------WAVRMKVAIGAAKGLTFLHDAESQVIYR 100
G L N L R+ + + + AKG+ FL A I+R
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHR 187
Query: 101 DFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSD 160
D A NILL K+ DFGLA+ V + APE + T +SD
Sbjct: 188 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 247
Query: 161 VYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQK 218
V+S+G+ L EL S +G + PY + K ++++ P+
Sbjct: 248 VWSYGIFLWELFS---------LG--------SSPYPGMPVDSKFYKMIKEGFRMLSPEH 290
Query: 219 AAHTAATLALQCLNNEPKLRPRMSEVLAILER 250
A + C + +P RP +++ ++E+
Sbjct: 291 APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 109/270 (40%), Gaps = 39/270 (14%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
M VAVK LKP +E L ++YLG +H N+V L+G C G L++ E+
Sbjct: 77 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 57 GSLENHLFRRGPQPLS----------------WAVRMKVAIGAAKGLTFLHDAESQVIYR 100
G L N L R+ + + + AKG+ FL A I+R
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHR 192
Query: 101 DFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSD 160
D A NILL K+ DFGLA+ V + APE + T +SD
Sbjct: 193 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 161 VYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAA 220
V+S+G+ L EL SL P + K ++++ P+ A
Sbjct: 253 VWSYGIFLWELF---------------SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 297
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILER 250
+ C + +P RP +++ ++E+
Sbjct: 298 AEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 40/247 (16%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQ-------- 69
E+L E + + ++V+L+G +G+ L+V E M G L+++L P+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 70 PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTG 129
P + +++A A G+ +L+ + ++RD A N ++ +F K+ DFG+ T
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGM-----TR 178
Query: 130 DRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVG 184
D + G G + APE + G TT SD++SFGVVL E+
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI------------- 225
Query: 185 IEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMS 242
SL + +PY LS+++ L +MD Q P L C PK+RP
Sbjct: 226 --TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 243 EVLAILE 249
E++ +L+
Sbjct: 281 EIVNLLK 287
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 109/270 (40%), Gaps = 39/270 (14%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
M VAVK LKP +E L ++YLG +H N+V L+G C G L++ E+
Sbjct: 77 MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 57 GSLENHLFRRGPQPLS----------------WAVRMKVAIGAAKGLTFLHDAESQVIYR 100
G L N L R+ + + + AKG+ FL A I+R
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCIHR 192
Query: 101 DFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSD 160
D A NILL K+ DFGLA+ V + APE + T +SD
Sbjct: 193 DLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 161 VYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAA 220
V+S+G+ L EL SL P + K ++++ P+ A
Sbjct: 253 VWSYGIFLWELF---------------SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 297
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILER 250
+ C + +P RP +++ ++E+
Sbjct: 298 AEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 106/246 (43%), Gaps = 35/246 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 113
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ RT +S
Sbjct: 114 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS--- 168
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 214
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNSA 258
+++ R+ T +P A L + L + P RP + EV LE NS+
Sbjct: 215 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREV---LEHPWITANSS 266
Query: 259 KLSQSE 264
K S S+
Sbjct: 267 KPSNSQ 272
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VA+K++ E +E + E++ + Q P++VK G + + +V E+ GS+ +
Sbjct: 56 IVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+ R + L+ + KGL +LH I+RD KA NILL+ E +AKL+DFG
Sbjct: 114 -IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFG 170
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+ AG D V+GT + APE + +D++S G+ +E+ G+
Sbjct: 171 V--AGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK LK PE FQ + EV L + H N++ +GY + +N +V ++
Sbjct: 61 VAVKILKVVDPTPEQFQAFR---NEVAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGS 116
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL HL + + + + + +A A+G+ +LH +I+RD K++NI L K+
Sbjct: 117 SLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLH--AKNIIHRDMKSNNIFLHEGLTVKI 173
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + Q G+ + APE + + +SDVYS+G+VL EL++G
Sbjct: 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCL-EGENRL-LVYEFMPKGSL 59
+VAVK+L+ G +++ E+ L LH +VK G G L LV E++P G L
Sbjct: 38 LVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R + L + + + KG+ +L + ++RD A NIL+++E + K++D
Sbjct: 98 RDFLQRHRAR-LDASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIAD 154
Query: 120 FGLAKAGPTG-DRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGLAK P D V + APE ++ + +SDV+SFGVVL EL +
Sbjct: 155 FGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P+G + L Q LS + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTAT 117
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 218
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 219 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L HP+++KL + +V E++ G L +++ + G + R+ I
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
G+ + H V++RD K N+LLDA NAK++DFGL+ G+ S G+
Sbjct: 126 --LSGVDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GS 178
Query: 142 HGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKV 183
YAAPE V +GRL + D++S GV+L LL G D V
Sbjct: 179 PNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T++
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TEL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
++L E L Q HPN+V+LIG C + + +V E + G L G + L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLL 216
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ AA G+ +L I+RD A N L+ + K+SDFG+++ G
Sbjct: 217 QMVGDAAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
+ APE + GR +++SDV+SFG++L E S +G A PY
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS---------LG--------ASPYP 317
Query: 198 SDKRKLFRIMDTKLGGQYPQKAAHTAATLAL--QCLNNEPKLRPRMSEVLAILERL 251
+ + R K GG+ P A L QC EP RP S + L+ +
Sbjct: 318 NLSNQQTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 138
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 139 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 192
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 239
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 240 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L HP+++KL + +V E++ G L +++ + G A R+ I
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A H V++RD K N+LLDA NAK++DFGL+ G+ S G+
Sbjct: 121 LSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GS 173
Query: 142 HGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 199
YAAPE V +GRL + D++S GV+L LL G D V P L
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFK 221
Query: 200 KRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEV 244
K + GG + P+ + ATL + L +P R + ++
Sbjct: 222 KIR---------GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 3 VAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK K + +KE +++E + L HP++VKLIG +E E ++ E P G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL-G 112
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
H R L + ++ K + +L ++RD NIL+ + KL DFG
Sbjct: 113 HYLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFG 170
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDK 180
L++ D S + + +PE + R TT SDV+ F V + E+LS G+
Sbjct: 171 LSRYIEDEDYYKASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSFGK----- 224
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
+P+ + + + +++ P TL +C + +P RP
Sbjct: 225 -------------QPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 271
Query: 240 RMSEVLAIL 248
R +E++ L
Sbjct: 272 RFTELVCSL 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 3 VAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK K + +KE +++E + L HP++VKLIG +E E ++ E P G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL-G 96
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
H R L + ++ K + +L ++RD NIL+ + KL DFG
Sbjct: 97 HYLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFG 154
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDK 180
L++ D S + + +PE + R TT SDV+ F V + E+LS G+
Sbjct: 155 LSRYIEDEDYYKASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSFGK----- 208
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
+P+ + + + +++ P TL +C + +P RP
Sbjct: 209 -------------QPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 255
Query: 240 RMSEVLAIL 248
R +E++ L
Sbjct: 256 RFTELVCSL 264
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
++L E L Q HPN+V+LIG C + + +V E + G L G + L +
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLL 216
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
++ AA G+ +L I+RD A N L+ + K+SDFG+++ G
Sbjct: 217 QMVGDAAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
+ APE + GR +++SDV+SFG++L E S +G A PY
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS---------LG--------ASPYP 317
Query: 198 SDKRKLFRIMDTKLGGQYPQKAAHTAATLAL--QCLNNEPKLRPRMSEVLAILERL 251
+ + R K GG+ P A L QC EP RP S + L+ +
Sbjct: 318 NLSNQQTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 117
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 218
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 219 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 26 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR--RGPQPLSWAVRMKVAIGA 83
L + HP ++++ G + + ++ +++ G L + L + R P P++ +V +
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA- 118
Query: 84 AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG 143
L +LH + +IYRD K NILLD + K++DFG AK P V+ + GT
Sbjct: 119 ---LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPD 168
Query: 144 YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y APE V+T D +SFG+++ E+L+G
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 43/270 (15%)
Query: 1 MVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
M A+K++K + H+++ E+ L +L HHPN++ L+G C L E+ P G+
Sbjct: 43 MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 102
Query: 59 LENHLFRR--------------GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L + L + LS + A A+G+ +L ++ Q I+RD A
Sbjct: 103 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRDLAA 160
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVY 162
NIL+ + AK++DFGL++ G +V + MG + A E + TT SDV+
Sbjct: 161 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 215
Query: 163 SFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAH 221
S+GV+L E++S +G PY +L+ + + P
Sbjct: 216 SYGVLLWEIVS---------LG--------GTPYCGMTCAELYEKLPQGYRLEKPLNCDD 258
Query: 222 TAATLALQCLNNEPKLRPRMSEVLAILERL 251
L QC +P RP +++L L R+
Sbjct: 259 EVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 43/270 (15%)
Query: 1 MVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
M A+K++K + H+++ E+ L +L HHPN++ L+G C L E+ P G+
Sbjct: 53 MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 112
Query: 59 LENHLFRR--------------GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L + L + LS + A A+G+ +L ++ Q I+RD A
Sbjct: 113 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRDLAA 170
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVY 162
NIL+ + AK++DFGL++ G +V + MG + A E + TT SDV+
Sbjct: 171 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 225
Query: 163 SFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAH 221
S+GV+L E++S +G PY +L+ + + P
Sbjct: 226 SYGVLLWEIVS---------LG--------GTPYCGMTCAELYEKLPQGYRLEKPLNCDD 268
Query: 222 TAATLALQCLNNEPKLRPRMSEVLAILERL 251
L QC +P RP +++L L R+
Sbjct: 269 EVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 44/273 (16%)
Query: 3 VAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VAVK LK KE L +++LGQ H N+V L+G C G L++ E+ G
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 59 LENHLFRR-----GP----------------QPLSWAVRMKVAIGAAKGLTFLHDAESQV 97
L N L R+ GP +PL + + A+G+ FL A
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNC 179
Query: 98 IYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT 157
I+RD A N+LL AK+ DFGLA+ V + APE + T
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 158 KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQ 217
+SDV+S+G++L E+ S +G+ P + K ++++ P
Sbjct: 240 QSDVWSYGILLWEIFS---------LGLN------PYPGILVNSKFYKLVKDGYQMAQPA 284
Query: 218 KAAHTAATLALQCLNNEPKLRPRMSEVLAILER 250
A ++ C EP RP ++ + L+
Sbjct: 285 FAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 317
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 3 VAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK K + +KE +++E + L HP++VKLIG +E E ++ E P G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGEL-G 100
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
H R L + ++ K + +L ++RD NIL+ + KL DFG
Sbjct: 101 HYLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILVASPECVKLGDFG 158
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS-GRCAVDK 180
L++ D S + + +PE + R TT SDV+ F V + E+LS G+
Sbjct: 159 LSRYIEDEDYYKASVTRLPIK-WMSPESINFRRFTTASDVWMFAVCMWEILSFGK----- 212
Query: 181 TKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRP 239
+P+ + + + +++ P TL +C + +P RP
Sbjct: 213 -------------QPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 259
Query: 240 RMSEVLAIL 248
R +E++ L
Sbjct: 260 RFTELVCSL 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 113
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 114 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 167
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 214
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 215 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 102 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 158
Query: 120 FGLAKAGPTGDRTHVSTQVMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D +V + + APE + T + SD + FGV L E+ +
Sbjct: 159 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 3 VAVKKLKPEGFQGHK--EWLTEVNYLGQLHHPNLVKLIGYCLEGENR-----LLVYEFMP 55
VAVK +K + + E+L+E + HPN+++L+G C+E ++ +++ FM
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 56 KGSLENHL----FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 111
G L +L GP+ + +K + A G+ +L + ++RD A N +L
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNRNFLHRDLAARNCMLRD 182
Query: 112 EFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 171
+ ++DFGL+K +GD + A E +A T+KSDV++FGV + E+
Sbjct: 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 129
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 130 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 183
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 230
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 231 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 117
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 171
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 218
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 219 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 2 VVAVKKLKPEGFQGHKEW---LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VVA+KK+ G Q +++W + EV +L +L HPN ++ G L LV E+ GS
Sbjct: 81 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGS 139
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L +PL V GA +GL +LH +I+RD KA NILL KL
Sbjct: 140 ASD-LLEVHKKPLQEVEIAAVTHGALQGLAYLH--SHNMIHRDVKAGNILLSEPGLVKLG 196
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT---GRLTTKSDVYSFGVVLLEL 171
DFG A + +GT + APE + G+ K DV+S G+ +EL
Sbjct: 197 DFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 102 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 158
Query: 120 FGLAKAGPTGDRTHVSTQVMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D +V + + APE + T + SD + FGV L E+ +
Sbjct: 159 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 98 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D +V + + APE + T + SD + FGV L E+ +
Sbjct: 155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 3 VAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VAVK LK KE L +++LGQ H N+V L+G C G L++ E+ G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 59 LENHLFRR------------GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
L N L R+ LS + + A+G+ FL A I+RD A N
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARN 194
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGV 166
+LL AK+ DFGLA+ V + APE + T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 167 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
+L E+ S +G+ P + K ++++ P A ++
Sbjct: 255 LLWEIFS---------LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 299
Query: 227 ALQCLNNEPKLRPRMSEVLAILE 249
C EP RP ++ + L+
Sbjct: 300 MQACWALEPTHRPTFQQICSFLQ 322
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 98 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D +V + + APE + T + SD + FGV L E+ +
Sbjct: 155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKL-KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-- 59
VA+K L + G + + E++ E + + HP+LV+L+G CL +L V + MP G L
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLE 128
Query: 60 --ENHLFRRGPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
H G Q L +W V++ AKG+ +L E ++++RD A N+L+ + + K
Sbjct: 129 YVHEHKDNIGSQLLLNWCVQI------AKGMMYLE--ERRLVHRDLAARNVLVKSPNHVK 180
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLA+ ++ + + + A E + + T +SDV+S+GV + EL++
Sbjct: 181 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 115
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 216
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 108 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 120 FGLAKAGPTGDRTHVSTQVMGT-HGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D +V + + APE + T + SD + FGV L E+ +
Sbjct: 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 117
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 171
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 218
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 219 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 2 VVAVKKLKPEGFQGHKEW---LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VVA+KK+ G Q +++W + EV +L +L HPN ++ G L LV E+ GS
Sbjct: 42 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGS 100
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
+ L +PL V GA +GL +LH +I+RD KA NILL KL
Sbjct: 101 ASD-LLEVHKKPLQEVEIAAVTHGALQGLAYLH--SHNMIHRDVKAGNILLSEPGLVKLG 157
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT---GRLTTKSDVYSFGVVLLEL 171
DFG A + +GT + APE + G+ K DV+S G+ +EL
Sbjct: 158 DFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L HP+++KL + +V E++ G L +++ + G A R+ I
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A H V++RD K N+LLDA NAK++DFGL+ G+ S G+
Sbjct: 121 LSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GS 173
Query: 142 HGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 199
YAAPE V +GRL + D++S GV+L LL G D V P L
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFK 221
Query: 200 KRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEV 244
K + GG + P+ + ATL + L +P R + ++
Sbjct: 222 KIR---------GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 115
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 169
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 216
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 98 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH-----GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D VM H + APE + T + SD + FGV L E+ +
Sbjct: 155 FGLMRALPQND----DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 111
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 112 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 165
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 212
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 213 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 31/265 (11%)
Query: 3 VAVKKLKPEGFQGHK---EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VA+KK++ K + + E++ L QL+HPN++K +E +V E G L
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 60 ENHL--FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
+ F++ + + K + L +H +V++RD K +N+ + A KL
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH--SRRVMHRDIKPANVFITATGVVKL 177
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCA 177
D GL + + +T + ++GT Y +PE + KSD++S G +L E+ +
Sbjct: 178 GDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA---- 231
Query: 178 VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYP----QKAAHTAATLALQCLNN 233
P+ DK L+ + YP + L C+N
Sbjct: 232 --------------LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINP 277
Query: 234 EPKLRPRMSEVLAILERLEAPKNSA 258
+P+ RP ++ V + +R+ A S+
Sbjct: 278 DPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 116
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 117 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 170
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 217
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 218 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKL-KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-- 59
VA+K L + G + + E++ E + + HP+LV+L+G CL +L V + MP G L
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLE 105
Query: 60 --ENHLFRRGPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
H G Q L +W V++ AKG+ +L E ++++RD A N+L+ + + K
Sbjct: 106 YVHEHKDNIGSQLLLNWCVQI------AKGMMYLE--ERRLVHRDLAARNVLVKSPNHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLA+ ++ + + + A E + + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + +L+H N+V+ IG L+ R ++ E M G L+
Sbjct: 64 VAVKTL-PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 180
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 241 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 282
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 283 WQHQPEDRPNFA---IILERIE 301
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 31/258 (12%)
Query: 3 VAVKKLKPEG-FQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK + + E+L E + + ++V+L+G +G+ L+V E M G L++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 HLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+L P+ P + +++A A G+ +L+ + ++R+ A N ++ +F
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--AKKFVHRNLAARNCMVAHDF 167
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
K+ DFG+ + D + + + APE + G TT SD++SFGVVL E+
Sbjct: 168 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-- 225
Query: 174 GRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCL 231
SL + +PY LS+++ L +MD Q P L C
Sbjct: 226 -------------TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCW 269
Query: 232 NNEPKLRPRMSEVLAILE 249
P +RP E++ +L+
Sbjct: 270 QFNPNMRPTFLEIVNLLK 287
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P+G + L Q LS + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTAT 117
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 118 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXL 171
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 218
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 219 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 3 VAVKKLKPEGF---QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
VAVK LKP+ + +++ EVN + L H NL++L G L ++ V E P GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R+ + A+ A+G+ +L + I+RD A N+LL K+ D
Sbjct: 108 LDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLE--SKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH-----GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL +A P D VM H + APE + T + SD + FGV L E+ +
Sbjct: 165 FGLMRALPQND----DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 90
HP L + EN V E++ G L H+ LS A I GL FL
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI--ILGLQFL 135
Query: 91 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 150
H ++YRD K NILLD + + K++DFG+ K GD + + GT Y APE +
Sbjct: 136 H--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPEIL 191
Query: 151 ATGRLTTKSDVYSFGVVLLELLSGR 175
+ D +SFGV+L E+L G+
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 109
Query: 82 GA---AKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 110 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTL 163
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 210
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 211 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 31/258 (12%)
Query: 3 VAVKKLKPEG-FQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VAVK + + E+L E + + ++V+L+G +G+ L+V E M G L++
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 62 HLFRRGPQ--------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+L P+ P + +++A A G+ +L+ + ++R+ A N ++ +F
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--AKKFVHRNLAARNCMVAHDF 168
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
K+ DFG+ + D + + + APE + G TT SD++SFGVVL E+
Sbjct: 169 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-- 226
Query: 174 GRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCL 231
SL + +PY LS+++ L +MD Q P L C
Sbjct: 227 -------------TSLAE--QPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCW 270
Query: 232 NNEPKLRPRMSEVLAILE 249
P +RP E++ +L+
Sbjct: 271 QFNPNMRPTFLEIVNLLK 288
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPEGF--QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE + Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 78 VAVKTL-PEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 194
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 255 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 296
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 297 WQHQPEDRPNFA---IILERIE 315
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 35 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 90
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 91 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKI 147
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 148 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 208 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 255
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 256 RDERPLFPQILASIELL 272
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 60 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 115
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH A+S +I+RD K++NI L + K+
Sbjct: 116 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKI 172
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 173 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 233 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 280
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 281 RDERPLFPQILASIELL 297
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 38 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 93
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 94 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 211 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 258
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 259 RDERPLFPQILASIELL 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 61 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 116
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH A+S +I+RD K++NI L + K+
Sbjct: 117 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKI 173
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 174 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 234 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 281
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 282 RDERPLFPQILASIELL 298
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 33 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 88
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 89 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 206 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 253
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 254 RDERPLFPQILASIELL 270
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 38 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 93
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 94 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 211 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 258
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 259 RDERPLFPQILASIELL 275
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 53 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 108
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH A+S +I+RD K++NI L + K+
Sbjct: 109 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKI 165
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 166 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 226 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 273
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 274 RDERPLFPQILASIELL 290
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + +L+H N+V+ IG L+ R ++ E M G L+
Sbjct: 78 VAVKTL-PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 194
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 255 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 296
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 297 WQHQPEDRPNFA---IILERIE 315
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 138
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 139 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDL 192
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 239
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 240 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 33 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 88
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 89 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 146 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 206 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 253
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 254 RDERPLFPQILASIELL 270
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG----PQPLSWA 74
+ E L L P + + C + +RL V E++ G L H+ + G PQ + +A
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 126
Query: 75 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
+ + GL FLH + +IYRD K N++LD+E + K++DFG+ K T
Sbjct: 127 AEISI------GLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT-- 176
Query: 135 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
+ + GT Y APE +A D +++GV+L E+L+G+ D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 37 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 92
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 93 SLYHHL-HASETKFEMKKLIDIARQTARGMDYLH--AKSIIHRDLKSNNIFLHEDNTVKI 149
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + + +SDVY+FG+VL EL++G
Sbjct: 150 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 209
Query: 175 R 175
+
Sbjct: 210 Q 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 3 VAVKKLKPEGFQGHKEWLTE----VNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VAVK LK KE L +++LGQ H N+V L+G C G L++ E+ G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 59 LENHLFRRGPQPL----SWAVR---------MKVAIGAAKGLTFLHDAESQVIYRDFKAS 105
L N L RR + L ++A+ + + A+G+ FL A I+RD A
Sbjct: 137 LLNFL-RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL--ASKNCIHRDVAAR 193
Query: 106 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 165
N+LL AK+ DFGLA+ V + APE + T +SDV+S+G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 166 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAAT 225
++L E+ S +G+ P + K ++++ P A +
Sbjct: 254 ILLWEIFS---------LGLN------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS 298
Query: 226 LALQCLNNEPKLRPRMSEVLAILE 249
+ C EP RP ++ + L+
Sbjct: 299 IMQACWALEPTHRPTFQQICSFLQ 322
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY +V ++
Sbjct: 33 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 88
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 89 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH--AKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 206 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 253
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 254 RDERPLFPQILASIELL 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 61 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 116
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + + +A A+G+ +LH A+S +I+RD K++NI L + K+
Sbjct: 117 SLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLH-AKS-IIHRDLKSNNIFLHEDLTVKI 173
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + +SDVY+FG+VL EL++G
Sbjct: 174 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
+ +Q + + YLS +K+ P+ A +CL +
Sbjct: 234 QLPYSNIN-NRDQIIFMVGRGYLSPDL-------SKVRSNCPKAMKRLMA----ECLKKK 281
Query: 235 PKLRPRMSEVLAILERL 251
RP ++LA +E L
Sbjct: 282 RDERPLFPQILASIELL 298
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 3 VAVKKLKPEGFQ-GHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K++ E Q E L E+ + Q HHPN+V + + LV + + GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 62 ---HLFRRGPQP---LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
H+ +G L + + +GL +LH ++ I+RD KA NILL + +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 160
Query: 116 KLSDFGLAKAGPTG---DRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLEL 171
+++DFG++ TG R V +GT + APE + R K+D++SFG+ +EL
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 172 LSG 174
+G
Sbjct: 221 ATG 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 90 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 206
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 207 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 267 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 308
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 309 WQHQPEDRPNFA---IILERIE 327
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 43/270 (15%)
Query: 1 MVVAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
M A+K++K + H+++ E+ L +L HHPN++ L+G C L E+ P G+
Sbjct: 50 MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN 109
Query: 59 LENHLFRR--------------GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L + L + LS + A A+G+ +L ++ Q I+R+ A
Sbjct: 110 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRNLAA 167
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVY 162
NIL+ + AK++DFGL++ G +V + MG + A E + TT SDV+
Sbjct: 168 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 163 SFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAH 221
S+GV+L E++S +G PY +L+ + + P
Sbjct: 223 SYGVLLWEIVS---------LG--------GTPYCGMTCAELYEKLPQGYRLEKPLNCDD 265
Query: 222 TAATLALQCLNNEPKLRPRMSEVLAILERL 251
L QC +P RP +++L L R+
Sbjct: 266 EVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 90
HP L + EN V E++ G L H+ LS A I GL FL
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI--ILGLQFL 134
Query: 91 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 150
H ++YRD K NILLD + + K++DFG+ K GD + GT Y APE +
Sbjct: 135 H--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEIL 190
Query: 151 ATGRLTTKSDVYSFGVVLLELLSGR 175
+ D +SFGV+L E+L G+
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 3 VAVKKLKPEGFQ-GHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K++ E Q E L E+ + Q HHPN+V + + LV + + GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 62 ---HLFRRGPQP---LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
H+ +G L + + +GL +LH ++ I+RD KA NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSV 155
Query: 116 KLSDFGLAKAGPTG---DRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLEL 171
+++DFG++ TG R V +GT + APE + R K+D++SFG+ +EL
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 172 LSG 174
+G
Sbjct: 216 ATG 218
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 80 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 196
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 197 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 257 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 298
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 299 WQHQPEDRPNFA---IILERIE 317
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 37/258 (14%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K L+ + +KE L E + + P + +L+G CL +L V + MP G L +
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLD 107
Query: 62 HL----FRRGPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
H+ R G Q L +W +++ AKG+++L D ++++RD A N+L+ + + K
Sbjct: 108 HVRENRGRLGSQDLLNWCMQI------AKGMSYLEDV--RLVHRDLAARNVLVKSPNHVK 159
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRC 176
++DFGLA+ + + + + A E + R T +SDV+S+GV + EL++
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFG- 218
Query: 177 AVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT--LALQCLNN 233
AKPY R++ +++ G + PQ T + ++C
Sbjct: 219 ----------------AKPYDGIPAREIPDLLEK--GERLPQPPICTIDVYMIMVKCWMI 260
Query: 234 EPKLRPRMSEVLAILERL 251
+ + RPR E+++ R+
Sbjct: 261 DSECRPRFRELVSEFSRM 278
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 63 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 179
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 240 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 281
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 282 WQHQPEDRPNFA---IILERIE 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 63 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 121
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 179
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 240 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 281
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 282 WQHQPEDRPNFA---IILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 64 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 180
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 241 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 282
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 283 WQHQPEDRPNFA---IILERIE 301
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 47/286 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 181 VLVTEDNVMKIADFGLAR-----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 236 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 278
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA-PKNSAKLSQSEP 265
+ + C + P RP +++ L+R+ A N L S P
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEXLDLSMP 324
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF G+++
Sbjct: 36 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 95
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+ +PL+ + V L +LHD +++I+RD KA NIL + + KL+DF
Sbjct: 96 AVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADF 152
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 171
G++ A T +GT + APE V K+DV+S G+ L+E+
Sbjct: 153 GVS-AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY + + +V ++
Sbjct: 49 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGS 104
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 105 SLYHHL-HASETKFEMKKLIDIARQTARGMDYLH--AKSIIHRDLKSNNIFLHEDNTVKI 161
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + + +SDVY+FG+VL EL++G
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 175 R 175
+
Sbjct: 222 Q 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 70 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 186
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 187 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 247 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 288
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 289 WQHQPEDRPNFA---IILERIE 307
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 55 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 171
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 172 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 232 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 273
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 274 WQHQPEDRPNFA---IILERIE 292
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 114
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K+++FG + P+ R T +
Sbjct: 115 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 168
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 215
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 114
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 115 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXL 168
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 215
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 216 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 64 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 180
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 181 RVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 241 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 282
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 283 WQHQPEDRPNFA---IILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 78 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 194
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 255 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 296
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 297 WQHQPEDRPNFA---IILERIE 315
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 3 VAVKKLK-----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG 57
VAVK L P+ Q K EV L + H N++ +GY +V ++
Sbjct: 49 VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGS 104
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
SL +HL + +A A+G+ +LH +I+RD K++NI L + K+
Sbjct: 105 SLYHHL-HASETKFEMKKLIDIARQTARGMDYLH--AKSIIHRDLKSNNIFLHEDNTVKI 161
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV---ATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA +H Q+ G+ + APE + + + +SDVY+FG+VL EL++G
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 175 R 175
+
Sbjct: 222 Q 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 115
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K+++FG + P+ R T +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTL 169
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 216
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 113
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 114 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTL 167
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 214
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 215 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 115
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDL 169
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 216
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDF 168
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 81 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 197
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 198 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 258 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 299
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 300 WQHQPEDRPNFA---IILERIE 318
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 168
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 113 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AAL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 115
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXL 169
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 216
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKKLKPE--GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK L PE Q ++L E + + +H N+V+ IG L+ R ++ E M G L+
Sbjct: 104 VAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 61 NHLFRRGPQP-----LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN- 114
+ L P+P L+ + VA A G +L E+ I+RD A N LL
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPG 220
Query: 115 --AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
AK+ DFG+A+ M + PE G T+K+D +SFGV+L E+
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQY--PQKAAHTAATLALQC 230
S +G PY S + T GG+ P+ + QC
Sbjct: 281 S---------LGY--------MPYPSKSNQEVLEFVTS-GGRMDPPKNCPGPVYRIMTQC 322
Query: 231 LNNEPKLRPRMSEVLAILERLE 252
++P+ RP + ILER+E
Sbjct: 323 WQHQPEDRPNFA---IILERIE 341
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDF 172
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 115
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 116 YITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AAL 169
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQE 216
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 217 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+L++ + K+ DF
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLINTTCDLKICDF 188
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 189 GLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDF 168
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 170
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 166
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 167 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K LK + +E + E + QL +P +V+LIG C + E +LV E G L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 98
Query: 62 HLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L +R P+S + + + G+ +L E ++RD A N+LL AK+SDF
Sbjct: 99 FLVGKREEIPVSNVAELLHQV--SMGMKYLE--EKNFVHRDLAARNVLLVNRHYAKISDF 154
Query: 121 GLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
GL+KA D ++ + + G + APE + + +++SDV+S+GV + E LS
Sbjct: 155 GLSKA-LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 166
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 167 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 173
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 174 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 117 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 174
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 175 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 108 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 165
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 166 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKICDF 172
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
E + L +++HP +VKL Y + E +L L+ +F+ G L F R + + +
Sbjct: 76 ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 130
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
A L H +IYRD K NILLD E + KL+DFGL+K + D + G
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCG 188
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T Y APE V T +D +SFGV++ E+L+G
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 113 YITELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AAL 166
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y PE + K D++S GV+ E L G+ + A Y
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-------------ANTYQD 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+++ R+ T +P A L + L + P RP + EVL
Sbjct: 214 TYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 173
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 174 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 228
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 229 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 271
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 272 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 119 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 176
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 177 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 168
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 188
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 189 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
E + L +++HP +VKL Y + E +L L+ +F+ G L F R + + +
Sbjct: 76 ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 130
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
A L H +IYRD K NILLD E + KL+DFGL+K + D + G
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCG 188
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T Y APE V T +D +SFGV++ E+L+G
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 181 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 236 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 278
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 169
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 170 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 224
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 225 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 267
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 268 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
E + L +++HP +VKL Y + E +L L+ +F+ G L F R + + +
Sbjct: 77 ERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 131
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
A L H +IYRD K NILLD E + KL+DFGL+K + D + G
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCG 189
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T Y APE V T +D +SFGV++ E+L+G
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 181 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 236 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 278
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 115 DLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXDLKIXDF 168
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 169 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 172
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 173 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 227
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 228 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 270
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 271 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L + + A A+G+ +L A + I+RD A N
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 165
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 166 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 220
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 221 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 263
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 264 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 114 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 142 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 198
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 228
Query: 199 DKRKL 203
+K+
Sbjct: 229 PWKKI 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 96/230 (41%), Gaps = 36/230 (15%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L Q P + + G L+ ++ E++ GS + L P PL +
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILR 123
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
KGL +LH I+RD KA+N+LL + + KL+DFG+ AG D +GT
Sbjct: 124 EILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNXFVGT 179
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD-- 199
+ APE + K+D++S G+ +EL G +P SD
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKG-------------------EPPNSDLH 220
Query: 200 -KRKLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
R LF I L GQ+ + CLN +P+ RP E+L
Sbjct: 221 PMRVLFLIPKNSPPTLEGQHSKPFKEFVEA----CLNKDPRFRPTAKELL 266
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 47/286 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L + + A A+G+ +L A + I+RD A N
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 180
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 181 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 236 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 278
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA-PKNSAKLSQSEP 265
+ + C + P RP +++ L+R+ A N L S P
Sbjct: 279 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMP 324
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF G+++
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+ +PL+ + V L +LHD +++I+RD KA NIL + + KL+DF
Sbjct: 123 AVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADF 179
Query: 121 GL-AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 171
G+ AK T R +GT + APE V K+DV+S G+ L+E+
Sbjct: 180 GVSAKNTRTIQR---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 114 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 142 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 198
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 228
Query: 199 DKRKL 203
+K+
Sbjct: 229 PWKKI 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 117
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 118 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 232
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL+F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLSFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP-QPLSWAVRMKVA 80
E+ L Q + K G L+G ++ E++ GS + L R GP A +K
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEI 129
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
+ KGL +LH + I+RD KA+N+LL + + KL+DFG+ AG D +G
Sbjct: 130 L---KGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNTFVG 182
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD- 199
T + APE + +K+D++S G+ +EL G +P SD
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG-------------------EPPNSDM 223
Query: 200 --KRKLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
R LF I L G + + + CLN +P RP E+L
Sbjct: 224 HPMRVLFLIPKNNPPTLVGDFTK----SFKEFIDACLNKDPSFRPTAKELL 270
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 55
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+L + + GP A+ +V A + L F H ++ +I+RD K +NIL+ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANILISATNAV 155
Query: 116 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 115 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 142 HGYAAPEYVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 198
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 229
Query: 199 DKRKL 203
+K+
Sbjct: 230 PWKKI 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L H N++ + + ++ + +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 170
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 33 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSM 89
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 90 DLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 143
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 173 SGRC 176
+ R
Sbjct: 202 TRRA 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L+H N+VK G+ EG + L E+ G L + + P A R +
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A G+ +LH + +RD K N+LLD N K+SDFGLA +R + ++ GT
Sbjct: 115 MA--GVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 142 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLS 198
Y APE + + DV+S G+VL +L+G D+ Q DW K YL+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLN 229
Query: 199 DKRKL 203
+K+
Sbjct: 230 PWKKI 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 32 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSM 88
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 89 DLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 142
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 173 SGRC 176
+ R
Sbjct: 201 TRRA 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 120 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 149 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVKK+ Q + EV + HH N+V + L G+ +V EF+ G+L +
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 63 L--FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+ R + ++ V + + L++LH+ VI+RD K+ +ILL ++ KLSDF
Sbjct: 133 VTHTRMNEEQIA-----TVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDF 185
Query: 121 GLAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
G VS +V +GT + APE ++ T+ D++S G++++E++ G
Sbjct: 186 GFC--------AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 149 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA++K+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 55 VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 149 YVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-XQEYSDWKEKKTYLNPWKKI 233
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 33 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSM 89
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEG 143
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 173 SGRC 176
+ R
Sbjct: 202 TRRA 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 61 NHLFRRGPQPLSWAVR--------------MKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
+L R P L ++ + A A+G+ +L A + I+RD A N
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARN 221
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDV 161
+L+ + K++DFGLA+ D H+ T+G + APE + T +SDV
Sbjct: 222 VLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276
Query: 162 YSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAA 220
+SFGV+L E+ + +G PY +LF+++ P
Sbjct: 277 WSFGVLLWEIFT---------LG--------GSPYPGVPVEELFKLLKEGHRMDKPSNCT 319
Query: 221 HTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
+ + C + P RP +++ L+R+ A
Sbjct: 320 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 31 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLSM 87
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEG 141
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 173 SGRC 176
+ R
Sbjct: 200 TRRA 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L+H N+VK G+ EG + L E+ G L + + P A R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
+LH + +RD K N+LLD N K+SDFGLA +R + ++ GT Y APE
Sbjct: 119 YLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 149 YVATGRLTTK-SDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDW--AKPYLSDKRKL 203
+ + DV+S G+VL +L+G D+ Q DW K YL+ +K+
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI 233
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 29 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 85
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 139
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 173 SGRC 176
+ R
Sbjct: 198 TRRA 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 34 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 90
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 91 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 144
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 145 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 173 SGRC 176
+ R
Sbjct: 203 TRRA 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 29 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 85
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 139
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 173 SGRC 176
+ R
Sbjct: 198 TRRA 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 31 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 87
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 141
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 173 SGRC 176
+ R
Sbjct: 200 TRRA 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 37 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 93
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 94 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 147
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 148 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
Query: 173 SGRC 176
+ R
Sbjct: 206 TRRA 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLIGY----CLEGENRLLVYEFMP 55
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 116 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L H N++ + + ++ + +E
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTSDLKICDF 170
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T T+ + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 55
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 116 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 37 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 93
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 94 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 147
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 148 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
Query: 173 SGRC 176
+ R
Sbjct: 206 TRRA 209
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 34 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 92
V + Y E ++ L LV M G L+ H++ G A + A GL LH
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH- 303
Query: 93 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 152
+++YRD K NILLD + ++SD GLA P G +GT GY APE V
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKN 359
Query: 153 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVD 191
R T D ++ G +L E+++G+ + K I++ V+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 55
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 116 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 34 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 92
V + Y E ++ L LV M G L+ H++ G A + A GL LH
Sbjct: 245 FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH- 303
Query: 93 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 152
+++YRD K NILLD + ++SD GLA P G +GT GY APE V
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKN 359
Query: 153 GRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVD 191
R T D ++ G +L E+++G+ + K I++ V+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 55
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 100 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 155
Query: 116 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF G+++
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+ +PL+ + V L +LHD +++I+RD KA NIL + + KL+DF
Sbjct: 123 AVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADF 179
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 171
G++ + S +GT + APE V K+DV+S G+ L+E+
Sbjct: 180 GVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 29 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 85
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 139
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 173 SGRC 176
+ R
Sbjct: 198 TRRA 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 3 VAVKKLKPEGFQ--GHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK +G + +E + E + QL +P +V+LIG C + E +LV E G L
Sbjct: 366 VAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 423
Query: 61 NHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
L +R P+S + + + G+ +L E ++R+ A N+LL AK+SD
Sbjct: 424 KFLVGKREEIPVSNVAELLHQV--SMGMKYLE--EKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 120 FGLAKAGPTGDRTHVSTQVMGTH--GYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FGL+KA D ++ + + G + APE + + +++SDV+S+GV + E LS
Sbjct: 480 FGLSKA-LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 30 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 86
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 140
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 173 SGRC 176
+ R
Sbjct: 199 TRRA 202
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA---VRM 77
E + L ++HP +VKL Y + E +L L+ +F+ G L F R + + + V+
Sbjct: 80 ERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKF 134
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
+A A GL LH +IYRD K NILLD E + KL+DFGL+K D +
Sbjct: 135 YLA-ELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYS 189
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR------------CAVDKTKVGI 185
GT Y APE V + +D +S+GV++ E+L+G + K K+G+
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM 249
Query: 186 EQSLVDWAKPYLSDKRKLFR 205
Q L A+ L R LF+
Sbjct: 250 PQFLSTEAQSLL---RALFK 266
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 29 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 85
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 139
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 173 SGRC 176
+ R
Sbjct: 198 TRRA 201
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
EV + L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 113
Query: 81 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 114 EARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-- 169
Query: 135 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
+ G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 170 -DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 33 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 89
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 143
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 173 SGRC 176
+ R
Sbjct: 202 TRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 32 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 88
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 142
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 173 SGRC 176
+ R
Sbjct: 201 TRRA 204
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L Q P + K G L+ ++ E++ GS + L P PL +
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 126
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT
Sbjct: 127 EILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGT 182
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKR 201
+ APE + +K+D++S G+ +EL G + L +
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMK 226
Query: 202 KLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
LF I L G Y + CLN EP RP E+L
Sbjct: 227 VLFLIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 269
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 31 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 87
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 141
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 173 SGRC 176
+ R
Sbjct: 200 TRRA 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 33 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 89
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 90 DLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 143
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 173 SGRC 176
+ R
Sbjct: 202 TRRA 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 31 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 87
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEG 141
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 173 SGRC 176
+ R
Sbjct: 200 TRRA 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 32 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 88
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 142
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 173 SGRC 176
+ R
Sbjct: 201 TRRA 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 32 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 88
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPENLLINTEG 142
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 173 SGRC 176
+ R
Sbjct: 201 TRRA 204
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T + + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 173 GLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+KK+ P Q + + L E+ L + H N++ + + ++ + +E
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 62 HLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
L++ Q LS +GL ++H A V++RD K SN+LL+ + K+ DF
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCDLKICDF 173
Query: 121 GLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
GLA+ A P D T + + T Y APE + + TKS D++S G +L E+LS R
Sbjct: 174 GLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 25/186 (13%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLE 60
++ +L P Q + EV + L+HPN+VKL +E E L LV E+ G +
Sbjct: 47 IIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVF 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFN 114
++L G RMK AK + + H + +++RD KA N+LLD + N
Sbjct: 103 DYLVAHG--------RMKEKEARAKFRQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMN 152
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLS 173
K++DFG + G++ G+ YAAPE + + DV+S GV+L L+S
Sbjct: 153 IKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 174 GRCAVD 179
G D
Sbjct: 210 GSLPFD 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLL---VYEFMPKGS 58
VA+KK+ P Q + + L E+ L + H N++ G N ++ E M
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENII--------GINDIIRAPTIEQMKDVY 122
Query: 59 LENHLFRRG------PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 112
L HL Q LS +GL ++H A V++RD K SN+LL+
Sbjct: 123 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTT 180
Query: 113 FNAKLSDFGLAK-AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLE 170
+ K+ DFGLA+ A P D T T+ + T Y APE + + TKS D++S G +L E
Sbjct: 181 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 171 LLSGR 175
+LS R
Sbjct: 241 MLSNR 245
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 33 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 89
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 143
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 173 SGRC 176
+ R
Sbjct: 202 TRRA 205
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 31 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 87
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 141
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 173 SGRC 176
+ R
Sbjct: 200 TRRA 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 75
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 50 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 108
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 109 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-- 160
Query: 136 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 176
T + T Y APE + + +T D++S G + E+++ R
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KGSLENHLFRRGPQPLSWAV 75
+ E++ L +L+HPN+VKL+ + EN+L LV+EF+ K ++ P PL +
Sbjct: 49 IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 107
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ +GL F H +V++RD K N+L++ E KL+DFGLA+A RT+
Sbjct: 108 LFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-- 159
Query: 136 TQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRC 176
T + T Y APE + + +T D++S G + E+++ R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+EF+
Sbjct: 34 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQ 90
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 91 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 144
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 145 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 173 SGRC 176
+ R
Sbjct: 203 TRRA 206
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L Q P + K G L+ ++ E++ GS + L P PL +
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 111
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT
Sbjct: 112 EILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGT 167
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKR 201
+ APE + +K+D++S G+ +EL G + L +
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMK 211
Query: 202 KLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
LF I L G Y + CLN EP RP E+L
Sbjct: 212 VLFLIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L Q P + K G L+ ++ E++ GS + L P PL +
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 111
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT
Sbjct: 112 EILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGT 167
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKR 201
+ APE + +K+D++S G+ +EL G + L +
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMK 211
Query: 202 KLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
LF I L G Y + CLN EP RP E+L
Sbjct: 212 VLFLIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLT---EVNYLGQLHHPNLVKLI----GYCLEGENRLLVYEFMP 55
VAVK L+ + + +L E L+HP +V + G +V E++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+L + + GP A+ +V A + L F H ++ +I+RD K +NI++ A
Sbjct: 117 GVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSH--QNGIIHRDVKPANIMISATNAV 172
Query: 116 KLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFG+A+A +G+ + V+GT Y +PE + +SDVYS G VL E+L+G
Sbjct: 173 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILG 169
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 170 KVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 224
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQIL 109
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 110 GKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MAN 164
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+ +GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ K L QG E E++YL L HP+++KL + ++V E+ L +
Sbjct: 36 IINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 92
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
++ +R A R I +A H ++++RD K N+LLD N K++DFG
Sbjct: 93 YIVQRDKMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFG 148
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVD 179
L+ G+ S G+ YAAPE V +G+L + DV+S GV+L +L R D
Sbjct: 149 LSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
Query: 180 KTKV 183
+
Sbjct: 205 DESI 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
++ A K + + + ++++ E++ L HPN+VKL+ N ++ EF G+++
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+ +PL+ + V L +LHD +++I+RD KA NIL + + KL+DF
Sbjct: 123 AVMLEL-ERPLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADF 179
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVLLEL 171
G++ +GT + APE V K+DV+S G+ L+E+
Sbjct: 180 GVSAKNTR--XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ K L QG E E++YL L HP+++KL + ++V E+ L +
Sbjct: 46 IINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 102
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
++ +R A R I +A H ++++RD K N+LLD N K++DFG
Sbjct: 103 YIVQRDKMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFG 158
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVD 179
L+ G+ S G+ YAAPE V +G+L + DV+S GV+L +L R D
Sbjct: 159 LSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
Query: 180 KTKV 183
+
Sbjct: 215 DESI 218
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ K L QG E E++YL L HP+++KL + ++V E+ L +
Sbjct: 45 IINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 101
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
++ +R A R I +A H ++++RD K N+LLD N K++DFG
Sbjct: 102 YIVQRDKMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFG 157
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVD 179
L+ G+ S G+ YAAPE V +G+L + DV+S GV+L +L R D
Sbjct: 158 LSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
Query: 180 KTKV 183
+
Sbjct: 214 DESI 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ K L QG E E++YL L HP+++KL + ++V E+ L +
Sbjct: 40 IINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 96
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
++ +R A R I +A H ++++RD K N+LLD N K++DFG
Sbjct: 97 YIVQRDKMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFG 152
Query: 122 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVD 179
L+ G+ S G+ YAAPE V +G+L + DV+S GV+L +L R D
Sbjct: 153 LSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
Query: 180 KTKV 183
+
Sbjct: 209 DESI 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
EV + L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 113
Query: 81 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 114 EARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 135 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 62 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 59 LENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAA 178
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
NILL + K+ DFGLA+ + APE + T +SDV+SF
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHT 222
GV+L E+ S +G A PY + + R + + P
Sbjct: 239 GVLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE 281
Query: 223 AATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 282 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
EV + L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 113
Query: 81 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 114 EARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 135 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 60 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 59 LENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAA 176
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
NILL + K+ DFGLA+ + APE + T +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHT 222
GV+L E+ S +G A PY + + R + + P
Sbjct: 237 GVLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE 279
Query: 223 AATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
EV + L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 113
Query: 81 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 114 EARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 135 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLT-EVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGS 58
M V ++L PE + +E E + L Q+ HP+++ LI LV++ M KG
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L ++L + LS + + ++FLH + +++RD K NILLD +LS
Sbjct: 187 LFDYLTEK--VALSEKETRSIMRSLLEAVSFLH--ANNIVHRDLKPENILLDDNMQIRLS 242
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT------KSDVYSFGVVLLELL 172
DFG + G++ ++ GT GY APE + T + D+++ GV+L LL
Sbjct: 243 DFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 173 SG 174
+G
Sbjct: 300 AG 301
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH-LFRRGPQPLSWAVRMK 78
L EV L QL HPN++KL + + N LV E G L + + R+ + AV MK
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVS 135
+ G T+LH + +++RD K N+LL+++ K+ DFGL+ G +
Sbjct: 129 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 180
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ +GT Y APE V + K DV+S GV+L LL G
Sbjct: 181 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLE 60
++ +L P Q + EV + L+HPN+VKL +E E L L+ E+ G +
Sbjct: 44 IIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGGEVF 99
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFN 114
++L G RMK +K + + H + ++++RD KA N+LLDA+ N
Sbjct: 100 DYLVAHG--------RMKEKEARSKFRQIVSAVQYCH--QKRIVHRDLKAENLLLDADMN 149
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLS 173
K++DFG + G + G+ YAAPE + + DV+S GV+L L+S
Sbjct: 150 IKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 174 GRCAVD 179
G D
Sbjct: 207 GSLPFD 212
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 3 VAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGSL 59
VAVK LK H+ ++E+ L + HH N+V L+G C + G +++ EF G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 60 ENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 105
+L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 106 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 165
NILL + K+ DFGLA+ + APE + T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 166 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 223
V+L E+ S +G A PY + + R + + P
Sbjct: 229 VLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 271
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH-LFRRGPQPLSWAVRMK 78
L EV L QL HPN++KL + + N LV E G L + + R+ + AV MK
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVS 135
+ G T+LH + +++RD K N+LL+++ K+ DFGL+ G +
Sbjct: 112 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 163
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ +GT Y APE V + K DV+S GV+L LL G
Sbjct: 164 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L Q P + K G L+ ++ E++ GS + L P PL +
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILR 131
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
KGL +LH + I+RD KA+N+LL KL+DFG+ AG D +GT
Sbjct: 132 EILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGT 187
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKR 201
+ APE + +K+D++S G+ +EL G + L +
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE----------------LHPMK 231
Query: 202 KLFRIMDTK---LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
LF I L G Y + CLN EP RP E+L
Sbjct: 232 VLFLIPKNNPPTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELL 274
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILG 134
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 135 KVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 189
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 3 VAVKKLKPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP---KG 57
VA+K++K + +G + E++ + +L H N+V+L + EN+L LV+EFM K
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD-VIHTENKLTLVFEFMDNDLKK 91
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
+++ P+ L + +GL F H E+++++RD K N+L++ KL
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKL 149
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGR 175
DFGLA+A T S V T Y AP+ + R +T D++S G +L E+++G+
Sbjct: 150 GDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 51 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 110 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 166
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ + T ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 167 SRYVLDDEETSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA++++ + + + E+ + + +PN+V + L G+ +V E++ GSL +
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ A + + A L FLH +QVI+RD K+ NILL + + KL+DFG
Sbjct: 108 VTETCMDEGQIAAVCRECLQA---LEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGF 162
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A T +++ ST V GT + APE V K D++S G++ +E++ G
Sbjct: 163 C-AQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 3 VAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGSL 59
VAVK LK H+ ++E+ L + HH N+V L+G C + G +++ EF G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 60 ENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 105
+L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 106 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 165
NILL + K+ DFGLA+ + APE + T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 166 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 223
V+L E+ S +G A PY + + R + + P
Sbjct: 229 VLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 271
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQIL 106
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 107 GKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 60 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 59 LENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAA 176
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
NILL + K+ DFGLA+ + APE + T +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHT 222
GV+L E+ S +G A PY + + R + + P
Sbjct: 237 GVLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE 279
Query: 223 AATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQIL 106
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 107 GKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 3 VAVKKLKPEGFQG--HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK + +G +E+ E +L HPN+V L+G + + +++ + G L
Sbjct: 59 VAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 117
Query: 61 NHLFRRGPQP--------------LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
L R P L + + A G+ +L + V+++D N
Sbjct: 118 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL--SSHHVVHKDLATRN 175
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGV 166
+L+ + N K+SD GL + D + + + APE + G+ + SD++S+GV
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 167 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 225
VL E+ S G++ PY + + ++ + P
Sbjct: 236 VLWEVFS---------YGLQ--------PYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYA 278
Query: 226 LALQCLNNEPKLRPRMSEV 244
L ++C N P RPR ++
Sbjct: 279 LMIECWNEFPSRRPRFKDI 297
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQIL 106
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 107 GKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
EV + L+HPN+VKL +E E L LV E+ G + ++L G RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 113
Query: 81 IGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
AK + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 114 EARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA 171
Query: 135 STQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
G YAAPE + + DV+S GV+L L+SG D
Sbjct: 172 ---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 31 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 90 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 146
Query: 123 AKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 147 SRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 3 VAVKKLKPEGFQG--HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VA+K LK + +G +E+ E +L HPN+V L+G + + +++ + G L
Sbjct: 42 VAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 100
Query: 61 NHLFRRGPQ--------------PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
L R P L + + A G+ +L + V+++D N
Sbjct: 101 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL--SSHHVVHKDLATRN 158
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGV 166
+L+ + N K+SD GL + D + + + APE + G+ + SD++S+GV
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 167 VLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTAAT 225
VL E+ S G++ PY + + ++ + P
Sbjct: 219 VLWEVFS---------YGLQ--------PYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYA 261
Query: 226 LALQCLNNEPKLRPRMSEV 244
L ++C N P RPR ++
Sbjct: 262 LMIECWNEFPSRRPRFKDI 280
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 35 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 94 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 150
Query: 123 AKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 151 SRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 30 HHPNLVKLIGYCLEGENRLL-VYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
+HP L +L C + +RL V EF+ G L H+ + + A A L
Sbjct: 82 NHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISALM 138
Query: 89 FLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPE 148
FLHD +IYRD K N+LLD E + KL+DFG+ K G T + GT Y APE
Sbjct: 139 FLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPE 194
Query: 149 YVATGRLTTKSDVYSFGVVLLELLSG 174
+ D ++ GV+L E+L G
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 18 EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILG 126
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 127 KVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 181
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E++YL L HP+++KL + ++V E+ G L +++ + R I
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A + + H ++++RD K N+LLD N K++DFGL+ G+ S G+
Sbjct: 118 ICA--IEYCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GS 170
Query: 142 HGYAAPEYVATGRLTT--KSDVYSFGVVLLELLSGRCAVD 179
YAAPE V G+L + DV+S G+VL +L GR D
Sbjct: 171 PNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 60 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 59 LENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAA 176
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
NILL + K+ DFGLA+ + APE + T +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHT 222
GV+L E+ S +G A PY + + R + + P
Sbjct: 237 GVLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE 279
Query: 223 AATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 25/186 (13%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLE 60
++ +L P Q + EV + L+HPN+VKL +E E L L+ E+ G +
Sbjct: 47 IIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGGEVF 102
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAK------GLTFLHDAESQVIYRDFKASNILLDAEFN 114
++L G RMK +K + + H + ++++RD KA N+LLDA+ N
Sbjct: 103 DYLVAHG--------RMKEKEARSKFRQIVSAVQYCH--QKRIVHRDLKAENLLLDADMN 152
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLS 173
K++DFG + G + G YAAPE + + DV+S GV+L L+S
Sbjct: 153 IKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 174 GRCAVD 179
G D
Sbjct: 210 GSLPFD 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTAT 116
Query: 82 ---GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R T +
Sbjct: 117 YITELANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTL 170
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
GT Y PE + K D++S GV+ E L G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 36 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 95 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 151
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ + T ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 152 SRYVLDDEYTSSRGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQIL 106
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 107 GKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVR 76
+ + E+ L + + P +V G + E M GSL+ L + G P +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQIL 106
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
KV+I KGLT+L + + ++++RD K SNIL+++ KL DFG++ G D ++
Sbjct: 107 GKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+GT Y +PE + + +SD++S G+ L+E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 51 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 110 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 166
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ + T ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 167 SRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLL--VYEFMPKGSLENHLFR--RGPQPLSWAV 75
++EVN L +L HPN+V+ ++ N L V E+ G L + + + + Q L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 76 RMKVAIGAAKGLTFLH---DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRT 132
++V L H D V++RD K +N+ LD + N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
+ +GT Y +PE + KSD++S G +L EL CA+
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLL--VYEFMPKGSLENHLFR--RGPQPLSWAV 75
++EVN L +L HPN+V+ ++ N L V E+ G L + + + + Q L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 76 RMKVAIGAAKGLTFLH---DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRT 132
++V L H D V++RD K +N+ LD + N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
+ +GT Y +PE + KSD++S G +L EL CA+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 3 VAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGSL 59
VAVK LK H+ ++E+ L + HH N+V L+G C + G +++ EF G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 60 ENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 105
+L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 106 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 165
NILL + K+ DFGLA+ + APE + T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 166 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 223
V+L E+ S +G A PY + + R + + P
Sbjct: 229 VLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 271
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 3 VAVKKLKPEGFQGH--KEWLTEVNYLGQLHHPNLVKLIGYCLEGENR------LLVYEFM 54
VAVK LK + +E+L E + + HP++ KL+G L + +++ FM
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 55 PKGSLENHLF--RRGPQPLSWAVR--MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 110
G L L R G P + ++ ++ + A G+ +L + I+RD A N +L
Sbjct: 114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLA 171
Query: 111 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 170
+ ++DFGL++ +GD + A E +A T SDV++FGV + E
Sbjct: 172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWE 231
Query: 171 LLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG---QYPQKAAHTAATLA 227
+++ GIE + I + +GG + P + L
Sbjct: 232 IMTRG---QTPYAGIENA----------------EIYNYLIGGNRLKQPPECMEEVYDLM 272
Query: 228 LQCLNNEPKLRPRMSEVLAILERL 251
QC + +PK RP + + LE +
Sbjct: 273 YQCWSADPKQRPSFTCLRMELENI 296
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 112
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 164
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 37/286 (12%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTA 223
GV++ E+ + +G PY +LF+++ P +
Sbjct: 246 GVLMWEIFT---------LG--------GSPYPGIPVEELFKLLKEGHRMDKPANCTNEL 288
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILER-LEAPKNSAKLSQSEPHRQ 268
+ C + P RP +++ L+R L N L S+P Q
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQPLEQ 334
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 36 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 95 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 151
Query: 123 AKAGPTGDRTHVSTQVMGTHG---YAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ D + S+ +G+ ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 152 SRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 117/265 (44%), Gaps = 32/265 (12%)
Query: 2 VVAVKKL--KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+VA+KK + K + E+ L QL H NLV L+ C + + LV+EF+ L
Sbjct: 52 IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTIL 111
Query: 60 EN-HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
++ LF P L + V K G+ F H +I+RD K NIL+ KL
Sbjct: 112 DDLELF---PNGLDYQVVQKYLFQIINGIGFCH--SHNIIHRDIKPENILVSQSGVVKLC 166
Query: 119 DFGLAK--AGPTGDRTHVSTQVMGTHGYAAPE-YVATGRLTTKSDVYSFGVVLLE----- 170
DFG A+ A P V + T Y APE V + DV++ G ++ E
Sbjct: 167 DFGFARTLAAP----GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 171 -LLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLF---RIMDTK----LGGQYPQKAA 220
L G +D+ I L + + L +K +F R+ + K L +YP K +
Sbjct: 223 PLFPGDSDIDQL-YHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYP-KLS 280
Query: 221 HTAATLALQCLNNEPKLRPRMSEVL 245
LA +CL+ +P RP +E+L
Sbjct: 281 EVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGP--------------QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + +++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-DKRKLFRIMDTKLGGQYPQKAAHTA 223
GV++ E+ + +G PY +LF+++ P +
Sbjct: 246 GVLMWEIFT---------LG--------GSPYPGIPVEELFKLLKEGHRMDKPANCTNEL 288
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILER-LEAPKNSAKLSQSEPHRQ 268
+ C + P RP +++ L+R L N L S+P Q
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQPLEQ 334
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 106
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 107 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 158
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 97 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 155
Query: 59 LENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAA 213
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
NILL + K+ DFGLA+ + APE + T +SDV+SF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 165 GVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHT 222
GV+L E+ S +G A PY + + R + + P
Sbjct: 274 GVLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE 316
Query: 223 AATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 317 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 3 VAVKKLKPEGFQG-HKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGSL 59
VAVK LK H+ ++E+ L + HH N+V L+G C + G +++ EF G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 60 ENHL---------FRRGPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKAS 105
+L ++ P+ L + + + AKG+ FL A + I+RD A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 168
Query: 106 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 165
NILL + K+ DFGLA+ + APE + T +SDV+SFG
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 166 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 223
V+L E+ S +G A PY + + R + + P
Sbjct: 229 VLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 271
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 272 YQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 196 LTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 254
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 255 AEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--F 309
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 352
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 353 DHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 115
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 116 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 167
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 168 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
LTE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 199 LTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 257
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH +E V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 258 AEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--F 312
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 355
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D KLF ++ + ++P+ A +L L +PK R
Sbjct: 356 DHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 110 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 161
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 105
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 159
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA+K +K EG E++ E + L H LV+L G C + ++ E+M G L N+
Sbjct: 42 VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
L R +++ + + +L Q ++RD A N L++ + K+SDFGL
Sbjct: 101 L-REMRHRFQTQQLLEMCKDVCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGL 157
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ + T ++ PE + + ++KSD+++FGV++ E+ S
Sbjct: 158 SRYVLDDEYTSSVGSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 108
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 160
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 164
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VA+K + E +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 117
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 160
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 164
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLD 106
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 107 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 158
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 160
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 111
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 112 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 163
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 164 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA-VRMKV 79
EV + L+HPN+VKL +E E L LV E+ G + ++L G A + +
Sbjct: 56 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ 114
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
+ A + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 115 IVSAVQ---YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FC 166
Query: 140 GTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
G+ YAAPE + + DV+S GV+L L+SG D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 99
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 100 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 151
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 159
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 160
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VA+K + E +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 117
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLL--VYEFMPKGSLENHLFR--RGPQPLSWAV 75
++EVN L +L HPN+V+ ++ N L V E+ G L + + + + Q L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 76 RMKVAIGAAKGLTFLH---DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRT 132
++V L H D V++RD K +N+ LD + N KL DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDE 170
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
+ + +GT Y +PE + KSD++S G +L EL CA+
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL----CAL 212
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLD 105
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 39/268 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 61 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 119
Query: 59 LENHLFRRGPQPLSWAV-------------RMKVAIGAAKGLTFLHDAESQVIYRDFKAS 105
L +L + + + + + + AKG+ FL A + I+RD A
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAAR 177
Query: 106 NILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFG 165
NILL + K+ DFGLA+ + APE + T +SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 166 VVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTA 223
V+L E+ S +G A PY + + R + + P
Sbjct: 238 VLLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 280
Query: 224 ATLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 281 YQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VA+K + E +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 117
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 130
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 131 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 182
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 183 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 62 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 59 LENHLFRR-------GPQPL-----SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASN 106
L +L + P+ L + + + AKG+ FL A + I+RD A N
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARN 178
Query: 107 ILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGV 166
ILL + K+ DFGLA+ + APE + T +SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 167 VLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAA 224
+L E+ S +G A PY + + R + + P
Sbjct: 239 LLWEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 225 TLALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+E +
Sbjct: 29 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVHQ 85
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 86 DLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 139
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ T + T Y APE + + +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 173 SGRC 176
+ R
Sbjct: 198 TRRA 201
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L +L HPN++KL + + +V E G L + + +R A R+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
+ + G+T++H + +++RD K NILL++ + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---K 181
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 9/174 (5%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA++++ + + + E+ + + +PN+V + L G+ +V E++ GSL +
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ A + + A L FLH +QVI+RD K+ NILL + + KL+DFG
Sbjct: 108 VTETCMDEGQIAAVCRECLQA---LEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGF 162
Query: 123 -AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A+ P + ++++GT + APE V K D++S G++ +E++ G
Sbjct: 163 CAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L +L HPN++KL + + +V E G L + + +R A R+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
+ + G+T++H + +++RD K NILL++ + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--- 181
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Query: 4 AVKKLKPEGFQGHKE---WLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSL 59
A+K LK E E LTE L HP L L Y + +RL V E+ G L
Sbjct: 37 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 95
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
HL R A I +A L +LH +E V+YRD K N++LD + + K++D
Sbjct: 96 FFHLSRERVFSEDRARFYGAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITD 152
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FGL K G T GT Y APE + D + GVV+ E++ GR
Sbjct: 153 FGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF- 209
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
Y D KLF ++ + ++P+ A +L L +PK R
Sbjct: 210 ----------------YNQDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA++++ + + + E+ + + +PN+V + L G+ +V E++ GSL +
Sbjct: 48 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ A + + A L FLH +QVI+RD K+ NILL + + KL+DFG
Sbjct: 108 VTETCMDEGQIAAVCRECLQA---LEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGF 162
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A T +++ S V GT + APE V K D++S G++ +E++ G
Sbjct: 163 C-AQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 60 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 59 LENHLFRRGPQPLSWAVRMK----------VAIGAAKGLTFLHDAESQVIYRDFKASNIL 108
L +L + + + + K + AKG+ FL A + I+RD A NIL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKXIHRDLAARNIL 176
Query: 109 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 168
L + K+ DFGLA+ + APE + T +SDV+SFGV+L
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 169 LELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
E+ S +G A PY + + R + + P
Sbjct: 237 WEIFS---------LG--------ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 279
Query: 227 ALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 280 MLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L +L HPN++KL + + +V E G L + + +R A R+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
+ + G+T++H + +++RD K NILL++ + + K+ DFGL+ +
Sbjct: 129 QVFS--GITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---K 181
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 182 DRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA++++ + + + E+ + + +PN+V + L G+ +V E++ GSL +
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ A + + A L FLH +QVI+R+ K+ NILL + + KL+DFG
Sbjct: 109 VTETCMDEGQIAAVCRECLQA---LEFLHS--NQVIHRNIKSDNILLGMDGSVKLTDFGF 163
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A T +++ ST V GT + APE V K D++S G++ +E++ G
Sbjct: 164 C-AQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Query: 4 AVKKLKPEGFQGHKE---WLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSL 59
A+K LK E E LTE L HP L L Y + +RL V E+ G L
Sbjct: 39 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
HL R A I +A L +LH +E V+YRD K N++LD + + K++D
Sbjct: 98 FFHLSRERVFSEDRARFYGAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FGL K G T GT Y APE + D + GVV+ E++ GR
Sbjct: 155 FGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF- 211
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
Y D KLF ++ + ++P+ A +L L +PK R
Sbjct: 212 ----------------YNQDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 24/156 (15%)
Query: 25 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG----PQPLSWAVRMKV 79
+L QLH C + +RL V E++ G L H+ + G P + +A + +
Sbjct: 403 FLTQLHS---------CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI 453
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
GL FL +IYRD K N++LD+E + K++DFG+ K T +
Sbjct: 454 ------GLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFC 503
Query: 140 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
GT Y APE +A D ++FGV+L E+L+G+
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 20/184 (10%)
Query: 2 VVAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMP- 55
VVA+KK++ EG + E++ L +L+HPN+VKL+ + EN+L LV+E +
Sbjct: 33 VVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLLD-VIHTENKLYLVFEHVDQ 89
Query: 56 --KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
K ++ P PL + ++ +GL F H +V++RD K N+L++ E
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH--SHRVLHRDLKPQNLLINTEG 143
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
KL+DFGLA+A RT+ V T Y APE + + +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 173 SGRC 176
+ R
Sbjct: 202 TRRA 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 24/156 (15%)
Query: 25 YLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRG----PQPLSWAVRMKV 79
+L QLH C + +RL V E++ G L H+ + G P + +A + +
Sbjct: 82 FLTQLHS---------CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI 132
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
GL FL +IYRD K N++LD+E + K++DFG+ K T +
Sbjct: 133 ------GLFFLQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFC 182
Query: 140 GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
GT Y APE +A D ++FGV+L E+L+G+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 2 VVAVKKLK----PEGFQG-HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
+VA+KK+K E G ++ L E+ L +L HPN++ L+ N LV++FM +
Sbjct: 37 IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-E 95
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
LE + + L+ + + +GL +LH + +++RD K +N+LLD K
Sbjct: 96 TDLEV-IIKDNSLVLTPSHIKAYMLMTLQGLEYLH--QHWILHRDLKPNNLLLDENGVLK 152
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT-TKSDVYSFGVVLLELL 172
L+DFGLAK+ + +R + V T Y APE + R+ D+++ G +L ELL
Sbjct: 153 LADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL--FRRGPQPLSWA 74
+ + E+ L + + P +V G + E M GSL+ L +R P+
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----E 114
Query: 75 VRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHV 134
+ KV+I +GL +L + + Q+++RD K SNIL+++ KL DFG++ G D +
Sbjct: 115 ILGKVSIAVLRGLAYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--M 169
Query: 135 STQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
+ +GT Y APE + + +SD++S G+ L+EL GR
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 3 VAVKKLKPEG--FQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE-GENRLLVYEFMPKGS 58
VAVK LK EG H+ ++E+ L + HH N+V L+G C + G +++ EF G+
Sbjct: 60 VAVKMLK-EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 59 LENHLFRRGPQPLSWAVRMK----------VAIGAAKGLTFLHDAESQVIYRDFKASNIL 108
L +L + + + + K + AKG+ FL A + I+RD A NIL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNIL 176
Query: 109 LDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVL 168
L + K+ DFGLA+ + APE + T +SDV+SFGV+L
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 169 LELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
E+ S +G A PY + + R + + P
Sbjct: 237 WEIFS---------LG--------ASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQT 279
Query: 227 ALQCLNNEPKLRPRMSEVLAILERL 251
L C + EP RP SE++ L L
Sbjct: 280 MLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VA++++ + + + E+ + + +PN+V + L G+ +V E++ GSL +
Sbjct: 49 VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ A + + A L FLH +QVI+RD K+ NILL + + KL+DFG
Sbjct: 109 VTETCMDEGQIAAVCRECLQA---LEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGF 163
Query: 123 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A T +++ S V GT + APE V K D++S G++ +E++ G
Sbjct: 164 C-AQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 99/239 (41%), Gaps = 28/239 (11%)
Query: 4 AVKKLKPEGFQGHKE---WLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSL 59
A+K LK E E LTE L HP L L Y + +RL V E+ G L
Sbjct: 38 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 96
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
HL R A I +A L +LH +E V+YRD K N++LD + + K++D
Sbjct: 97 FFHLSRERVFSEDRARFYGAEIVSA--LDYLH-SEKNVVYRDLKLENLMLDKDGHIKITD 153
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FGL K G T GT Y APE + D + GVV+ E++ GR
Sbjct: 154 FGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF- 210
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
Y D KLF ++ + ++P+ A +L L +PK R
Sbjct: 211 ----------------YNQDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 80 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARI 137
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ +
Sbjct: 138 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---K 192
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 193 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 14 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR----GPQ 69
+ +KE L E + + +P++ +L+G CL +L+ + MP G L +++ G Q
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQ 151
Query: 70 PL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 128
L +W V++ AKG+ +L D ++++RD A N+L+ + K++DFGLAK
Sbjct: 152 YLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
Query: 129 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGP-QPLSWAVRMK 78
L EV L L HPN++KL + + N LV E G L + + R + AV +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDA-EFNA--KLSDFGLAKAGPTGDRTHVS 135
+ G+T+LH + +++RD K N+LL++ E +A K+ DFGL+ +
Sbjct: 144 QVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ +GT Y APE V + K DV+S GV+L LL+G
Sbjct: 196 KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 34/189 (17%)
Query: 13 FQGHKEWLTEVNYLGQ--LHHPNLVKLIGYCLEGENR----LLVYEFMPKGSLENHLFRR 66
Q + W +E + H NL++ I G N L+ F KGSL ++L +
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL--K 105
Query: 67 GPQPLSWAVRMKVAIGAAKGLTFLHDA---------ESQVIYRDFKASNILLDAEFNAKL 117
G ++W VA ++GL++LH+ + + +RDFK+ N+LL ++ A L
Sbjct: 106 G-NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVL 164
Query: 118 SDFGLA----KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT------TKSDVYSFGVV 167
+DFGLA P GD TH +GT Y APE V G + + D+Y+ G+V
Sbjct: 165 ADFGLAVRFEPGKPPGD-THGQ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLV 219
Query: 168 LLELLSGRC 176
L EL+S RC
Sbjct: 220 LWELVS-RC 227
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 74 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARI 131
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ +
Sbjct: 132 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---K 186
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 13/160 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG---SLENHLFRRGPQPLSWAVR 76
+ E++ L +LHHPN+V LI LV+EFM K L+ + + G Q +
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIY 124
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
+ + +G+ H + ++++RD K N+L++++ KL+DFGLA+A R++ T
Sbjct: 125 LYQLL---RGVAHCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--T 177
Query: 137 QVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGR 175
+ T Y AP+ + + + +T D++S G + E+++G+
Sbjct: 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 173
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 231
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 292 GVLMWEIFT 300
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 13/160 (8%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG---SLENHLFRRGPQPLSWAVR 76
+ E++ L +LHHPN+V LI LV+EFM K L+ + + G Q +
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIY 124
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
+ + +G+ H + ++++RD K N+L++++ KL+DFGLA+A R++ T
Sbjct: 125 LYQLL---RGVAHCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--T 177
Query: 137 QVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGR 175
+ T Y AP+ + + + +T D++S G + E+++G+
Sbjct: 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA- 80
EV L HPN+++L GY + L+ E+ P G++ L Q LS + A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTAT 116
Query: 81 --IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
A L++ H +VI+RD K N+LL + K++DFG + P+ R +
Sbjct: 117 YITELANALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTL 170
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
GT Y PE + K D++S GV+ E L G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 102
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ A+G+ +L D ++++RD A N+L+ + K
Sbjct: 103 YVREHKDNIGSQYLLNWCVQI------AEGMNYLED--RRLVHRDLAARNVLVKTPQHVK 154
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFGLAK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 155 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 16 HKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAV 75
H+E E++ L L HPN++KL + + LV EF G L + R A
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRT 132
+ I G+ +LH + +++RD K NILL+ + N K+ DFGL+ +
Sbjct: 150 NIMKQI--LSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KD 202
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ +GT Y APE V + K DV+S GV++ LL G
Sbjct: 203 YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 97 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARI 154
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ +
Sbjct: 155 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---K 209
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 210 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L QL HPN++KL + + LV E G L + + R + S ++
Sbjct: 98 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARI 155
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
G+T++H ++++++RD K N+LL++ + N ++ DFGL+ +
Sbjct: 156 IRQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---K 210
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 211 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VA+K + + +G + + E+ L ++ HPN+V L G + L+ + + G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL---LDAEFNAKL 117
+ + +G A R+ + A + +LHD +++RD K N+L LD + +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
SDFGL+K G V + GT GY APE +A + D +S GV+ LL G
Sbjct: 161 SDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENR-----------------LLVYEFMPKGSLENHLF 64
EV L +L H N+V G C +G + + EF KG+LE +
Sbjct: 54 EVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 65 RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK 124
+R + L + +++ KG+ ++H ++I RD K SNI L K+ DFGL
Sbjct: 113 KRRGEKLDKVLALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 125 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVG 184
+ + S GT Y +PE +++ + D+Y+ G++L ELL V T
Sbjct: 171 SLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH----VCDTAFE 223
Query: 185 IEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+ D +SD I D K TL + L+ +P+ RP SE+
Sbjct: 224 TSKFFTDLRDGIISD------IFDKK------------EKTLLQKLLSKKPEDRPNTSEI 265
Query: 245 LAIL 248
L L
Sbjct: 266 LRTL 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 55 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 114
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 115 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLTA 172
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 233 GVLMWEIFT 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 110 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 161
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFG AK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 162 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA-VRMKV 79
EV L+HPN+VKL +E E L LV E+ G + ++L G A + +
Sbjct: 63 EVRIXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ 121
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
+ A + + H + +++RD KA N+LLDA+ N K++DFG + G++
Sbjct: 122 IVSAVQ---YCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FC 173
Query: 140 GTHGYAAPEYVATGRLTT-KSDVYSFGVVLLELLSGRCAVD 179
G YAAPE + + DV+S GV+L L+SG D
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 159
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFG AK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 57 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 116
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 117 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 174
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 235 GVLMWEIFT 243
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 52 EFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA 111
EF KG+LE + +R + L + +++ KG+ ++H ++I+RD K SNI L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLVD 171
Query: 112 EFNAKLSDFGLAKA-GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 170
K+ DFGL + G RT + GT Y +PE +++ + D+Y+ G++L E
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKRT----RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 171 LLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 230
LL V T + D +SD I D K TL +
Sbjct: 228 LLH----VCDTAFETSKFFTDLRDGIISD------IFDKK------------EKTLLQKL 265
Query: 231 LNNEPKLRPRMSEVLAIL 248
L+ +P+ RP SE+L L
Sbjct: 266 LSKKPEDRPNTSEILRTL 283
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 60 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 119
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 177
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 238 GVLMWEIFT 246
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKV 79
TE+ L +P++V G+ + + +V E + SL E H R+ M+
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
I +G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R +
Sbjct: 151 TI---QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDL 202
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + + + D++S G +L LL G K E S + + Y+
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIR 253
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
K+ + + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 254 IKKNEYSV---------PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L++ + MP G L +
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 159
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFG AK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKV 79
TE+ L +P++V G+ + + +V E + SL E H R+ M+
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
I +G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R +
Sbjct: 135 TI---QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDL 186
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + + + D++S G +L LL G K E S + + Y+
Sbjct: 187 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIR 237
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
K+ + + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 238 IKKNEYSV---------PRHINPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 164
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFG AK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 165 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 159
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFG AK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGF-QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
VA+K+L+ + +KE L E + + +P++ +L+G CL +L+ + MP G L +
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 62 HLFRR----GPQPL-SWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ G Q L +W V++ AKG+ +L D ++++RD A N+L+ + K
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLED--RRLVHRDLAARNVLVKTPQHVK 157
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
++DFG AK ++ + + + A E + T +SDV+S+GV + EL++
Sbjct: 158 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKV 79
TE+ L +P++V G+ + + +V E + SL E H R+ M+
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
I +G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R +
Sbjct: 151 TI---QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXL 202
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + + + D++S G +L LL G K E S + + Y+
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIR 253
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
K+ + + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 254 IKKNEYSV---------PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRGPQPLSWAVRMKV 79
TE+ L +P++V G+ + + +V E + SL E H R+ M+
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
I +G+ +LH+ ++VI+RD K N+ L+ + + K+ DFGLA K G+R +
Sbjct: 151 TI---QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTL 202
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + + + D++S G +L LL G K E S + + Y+
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCL--KETYIR 253
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
K+ + + P+ A+ L + L+ +P LRP ++E+L
Sbjct: 254 IKKNEYSV---------PRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ E+ KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ +++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VAVKK+ Q + EV + H N+V++ L G+ +V EF+ G+L +
Sbjct: 178 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 237
Query: 62 HLFRRGPQPLSWAVRMK------VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+ RM V + + L+ LH VI+RD K+ +ILL +
Sbjct: 238 ---------IVTHTRMNEEQIAAVCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRV 286
Query: 116 KLSDFGLAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLL 169
KLSDFG VS +V +GT + APE ++ + D++S G++++
Sbjct: 287 KLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 338
Query: 170 ELLSG 174
E++ G
Sbjct: 339 EMVDG 343
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
EV QL HP++++L Y + LV E G + +L R +P S
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFM 118
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
G+ +LH +++RD SN+LL N K++DFGLA H + + G
Sbjct: 119 HQIITGMLYLH--SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKV 183
T Y +PE +SDV+S G + LL GR D V
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L EV L QL HPN+ KL + + LV E G L + + R + S ++
Sbjct: 74 LREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARI 131
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDA---EFNAKLSDFGLAKAGPTGDRTHVST 136
G+T+ H ++++++RD K N+LL++ + N ++ DFGL+ +
Sbjct: 132 IRQVLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX---K 186
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT Y APE V G K DV+S GV+L LLSG
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+ A K ++ + + ++++ E+ L HP +VKL+G ++ EF P G+++
Sbjct: 46 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 105
Query: 62 HLFR--RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ RG L+ V + L FLH ++I+RD KA N+L+ E + +L+D
Sbjct: 106 IMLELDRG---LTEPQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLAD 160
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT-----KSDVYSFGVVLLEL 171
FG++ + S +GT + APE V + K+D++S G+ L+E+
Sbjct: 161 FGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 56 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 114
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 115 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 168
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 211
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 212 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E N L ++ HP +V LI G L+ E++ G L L R G A I
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAG-PTGDRTHVSTQVMG 140
A G H + +IYRD K NI+L+ + + KL+DFGL K G TH G
Sbjct: 131 SMALG----HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCG 183
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T Y APE + D +S G ++ ++L+G
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VAVKK+ Q + EV + H N+V++ L G+ +V EF+ G+L +
Sbjct: 56 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 115
Query: 62 HLF--RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ R + ++ V + + L+ LH VI+RD K+ +ILL + KLSD
Sbjct: 116 IVTHTRMNEEQIA-----AVCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSD 168
Query: 120 FGLAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FG VS +V +GT + APE ++ + D++S G++++E++
Sbjct: 169 FGFC--------AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
Query: 174 G 174
G
Sbjct: 221 G 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E N L ++ HP +V LI G L+ E++ G L L R G A I
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A G H + +IYRD K NI+L+ + + KL+DFGL K D T V+ GT
Sbjct: 131 SMALG----HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCGT 184
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y APE + D +S G ++ ++L+G
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 58 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 116
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 117 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 170
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 213
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 214 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 112 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+ A K ++ + + ++++ E+ L HP +VKL+G ++ EF P G+++
Sbjct: 38 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 97
Query: 62 HLFR--RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ RG L+ V + L FLH ++I+RD KA N+L+ E + +L+D
Sbjct: 98 IMLELDRG---LTEPQIQVVCRQMLEALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLAD 152
Query: 120 FGL-AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTT-----KSDVYSFGVVLLEL 171
FG+ AK T + +GT + APE V + K+D++S G+ L+E+
Sbjct: 153 FGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 112 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 112 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VAVKK+ Q + EV + H N+V++ L G+ +V EF+ G+L +
Sbjct: 58 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 117
Query: 62 HLF--RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ R + ++ V + + L+ LH VI+RD K+ +ILL + KLSD
Sbjct: 118 IVTHTRMNEEQIA-----AVCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSD 170
Query: 120 FGLAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FG VS +V +GT + APE ++ + D++S G++++E++
Sbjct: 171 FGFC--------AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
Query: 174 G 174
G
Sbjct: 223 G 223
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 112 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
+TE L HP L L Y + +RL V E+ G L HL R A
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
I +A L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 112 AEIVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
D +LF ++ + ++P+ + A +L L +PK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL------ENHLFRRGPQPLSWAV 75
EV L + HPN+V+ E + +V ++ G L + + + Q L W V
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ +A L +HD ++++RD K+ NI L + +L DFG+A+ ++
Sbjct: 133 QICLA------LKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELA 182
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 195
+GT Y +PE KSD+++ G VL EL + + A +
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-------------- 228
Query: 196 YLSDKRKLFRIMDTKLGGQYPQKAAHTAA---TLALQCLNNEPKLRPRMSEVLA---ILE 249
S K + +I + G +P + H + +L Q P+ RP ++ +L I +
Sbjct: 229 --SMKNLVLKI----ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
Query: 250 RLE 252
R+E
Sbjct: 283 RIE 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VAVKK+ Q + EV + H N+V++ L G+ +V EF+ G+L +
Sbjct: 47 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 106
Query: 62 HLF--RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ R + ++ V + + L+ LH VI+RD K+ +ILL + KLSD
Sbjct: 107 IVTHTRMNEEQIA-----AVCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSD 159
Query: 120 FGLAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FG VS +V +GT + APE ++ + D++S G++++E++
Sbjct: 160 FGFC--------AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
Query: 174 G 174
G
Sbjct: 212 G 212
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 12 GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR----- 65
G+QG + E L ++H +V L Y E + L LV M G + H++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 66 ---RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ P+ + + ++ GL LH + +IYRD K N+LLD + N ++SD GL
Sbjct: 284 PGFQEPRAIFYTAQI------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGL 335
Query: 123 A---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A KAG T + + GT G+ APE + D ++ GV L E+++ R
Sbjct: 336 AVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VAVKK+ Q + EV + H N+V++ L G+ +V EF+ G+L +
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG 121
+ A V + + L+ LH VI+RD K+ +ILL + KLSDFG
Sbjct: 161 IVTHTRMNEEQIAA---VCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFG 215
Query: 122 LAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
VS +V +GT + APE ++ + D++S G++++E++ G
Sbjct: 216 FC--------AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 12 GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR----- 65
G+QG + E L ++H +V L Y E + L LV M G + H++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 66 ---RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ P+ + + ++ GL LH + +IYRD K N+LLD + N ++SD GL
Sbjct: 284 PGFQEPRAIFYTAQI------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGL 335
Query: 123 A---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A KAG T + + GT G+ APE + D ++ GV L E+++ R
Sbjct: 336 AVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 3 VAVKKLKPEGFQGHKEWL-TEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
VAVK LK + +E L +E+ + QL H N+V L+G C L++E+ G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 61 NHLFRRGPQ---------------------PLSWAVRMKVAIGAAKGLTFLHDAESQVIY 99
N+L + + L++ + A AKG+ FL ++
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE--FKSCVH 195
Query: 100 RDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS 159
RD A N+L+ K+ DFGLA+ + V + APE + G T KS
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 160 DVYSFGVVLLELLS 173
DV+S+G++L E+ S
Sbjct: 256 DVWSYGILLWEIFS 269
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 12 GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR----- 65
G+QG + E L ++H +V L Y E + L LV M G + H++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 66 ---RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ P+ + + ++ GL LH + +IYRD K N+LLD + N ++SD GL
Sbjct: 284 PGFQEPRAIFYTAQI------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGL 335
Query: 123 A---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A KAG T + + GT G+ APE + D ++ GV L E+++ R
Sbjct: 336 AVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 12 GFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFR----- 65
G+QG + E L ++H +V L Y E + L LV M G + H++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 66 ---RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 122
+ P+ + + ++ GL LH + +IYRD K N+LLD + N ++SD GL
Sbjct: 284 PGFQEPRAIFYTAQI------VSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGL 335
Query: 123 A---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
A KAG T + + GT G+ APE + D ++ GV L E+++ R
Sbjct: 336 AVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 2 VVAVKKLKPEGF-QGHKEWLTEVNYLGQLHH-PNLVKLIGYCLEGENRLLVYEFMPKGSL 59
V+AVK+++ G + +K L +++ + + H P +V+ G + + + E M G+
Sbjct: 52 VIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTC 109
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
L +R P+ + K+ + K L +L + VI+RD K SNILLD KL D
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCD 168
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLT-----TKSDVYSFGVVLLELLSG 174
FG+ +G D + G Y APE + T ++DV+S G+ L+EL +G
Sbjct: 169 FGI--SGRLVD-DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
Query: 175 RCAVDKTKVGIE 186
+ K E
Sbjct: 226 QFPYKNCKTDFE 237
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
+VAVKK+ Q + EV + H N+V++ L G+ +V EF+ G+L +
Sbjct: 51 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 110
Query: 62 HLF--RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ R + ++ V + + L+ LH VI+RD K+ +ILL + KLSD
Sbjct: 111 IVTHTRMNEEQIA-----AVCLAVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSD 163
Query: 120 FGLAKAGPTGDRTHVSTQV------MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
FG VS +V +GT + APE ++ + D++S G++++E++
Sbjct: 164 FGFC--------AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
Query: 174 G 174
G
Sbjct: 216 G 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 29/176 (16%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGE----NRLLVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
EV L + H N+++ IG G + L+ F KGSL + L +SW
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELC 124
Query: 78 KVAIGAAKGLTFLHDA--------ESQVIYRDFKASNILLDAEFNAKLSDFGLA---KAG 126
+A A+GL +LH+ + + +RD K+ N+LL A ++DFGLA +AG
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 127 PTGDRTHVSTQVMGTHGYAAPEYVATGRLT------TKSDVYSFGVVLLELLSGRC 176
+ TH +GT Y APE V G + + D+Y+ G+VL EL S RC
Sbjct: 185 KSAGDTHGQ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS-RC 235
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
TE+ L L H ++ +L + LE N++ +V E+ P G L +++ + LS V
Sbjct: 57 TEIEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVV 113
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
+ ++H +RD K N+L D KL DFGL A P G++ +
Sbjct: 114 FRQIVSAVAYVH--SQGYAHRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTCC 170
Query: 140 GTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
G+ YAAPE + L +++DV+S G++L L+ G D V ++
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------------MA 217
Query: 199 DKRKLFRIMDTKLGGQY--PQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
+K+ R G+Y P+ + ++ L Q L +PK R M +L
Sbjct: 218 LYKKIMR-------GKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 79
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V +
Sbjct: 149 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 199
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 200 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 250
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 251 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 79
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V +
Sbjct: 151 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 201
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 252
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 253 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 20 LTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
L EV+ L ++ HPN+++L LV++ M KG L ++L + LS K
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 115
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
+ + + LH + +++RD K NILLD + N KL+DFG + G++ +V
Sbjct: 116 IMRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 170
Query: 139 MGTHGYAAPEYVATGR------LTTKSDVYSFGVVLLELLSG 174
GT Y APE + + D++S GV++ LL+G
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ + KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
VAVK + Q + EV + H N+V++ L GE ++ EF+ G+L +
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132
Query: 63 L--FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+ R + ++ V + L +LH VI+RD K+ +ILL + KLSDF
Sbjct: 133 VSQVRLNEEQIA-----TVCEAVLQALAYLH--AQGVIHRDIKSDSILLTLDGRVKLSDF 185
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
G A + D ++GT + APE ++ T+ D++S G++++E++ G
Sbjct: 186 GFC-AQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 20 LTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
L EV+ L ++ HPN+++L LV++ M KG L ++L + LS K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 128
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
+ + + LH + +++RD K NILLD + N KL+DFG + G++ +V
Sbjct: 129 IMRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 183
Query: 139 MGTHGYAAPEYVATGR------LTTKSDVYSFGVVLLELLSG 174
GT Y APE + + D++S GV++ LL+G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 79
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R V +
Sbjct: 125 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 175
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 226
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 227 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+MP G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+MP G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 3 VAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKL------IGYCLEGENRLLVYEFMP 55
VA+K+ + E ++E W E+ + +L+HPN+V + + LL E+
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 56 KGSLENHL--------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
G L +L + GP +R ++ + L +LH E+++I+RD K NI
Sbjct: 103 GGDLRKYLNQFENCCGLKEGP------IRTLLS-DISSALRYLH--ENRIIHRDLKPENI 153
Query: 108 LLD---AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
+L K+ D G AK G+ + T+ +GT Y APE + + T D +SF
Sbjct: 154 VLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 165 GVVLLELLSG 174
G + E ++G
Sbjct: 211 GTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 3 VAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKL------IGYCLEGENRLLVYEFMP 55
VA+K+ + E ++E W E+ + +L+HPN+V + + LL E+
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 56 KGSLENHL--------FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
G L +L + GP +R ++ + L +LH E+++I+RD K NI
Sbjct: 102 GGDLRKYLNQFENCCGLKEGP------IRTLLS-DISSALRYLH--ENRIIHRDLKPENI 152
Query: 108 LLD---AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
+L K+ D G AK G+ + T+ +GT Y APE + + T D +SF
Sbjct: 153 VLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 165 GVVLLELLSG 174
G + E ++G
Sbjct: 210 GTLAFECITG 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
M VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGEL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ A KL D
Sbjct: 98 RSFLQVRKFS-LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSATDCVKLGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 155 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 205
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 206 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 1 MVVAVKKLKPEGFQGH-KEWLTEVNYLGQL-HHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
+ VAVK LK + + + ++E+ + + H N++ L+G C + ++ + KG+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGN 127
Query: 59 LENHLFRRGPQPLSWAVRMK--------------VAIGAAKGLTFLHDAESQVIYRDFKA 104
L +L R P + ++ + A+G+ +L A + I+RD A
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAA 185
Query: 105 SNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
N+L+ K++DFGLA+ D +T + APE + T +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 165 GVVLLELLS 173
GV++ E+ +
Sbjct: 246 GVLMWEIFT 254
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 28/255 (10%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
M VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 98 RSFLQVRKFS-LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
FGL++ S + + APE + R T+ SDV+ FGV + E+
Sbjct: 155 FGLSRYMEDSTXXKASKGKLPIK-WMAPESINFRRFTSASDVWMFGVCMWEI-------- 205
Query: 180 KTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCLNNEPK 236
L+ KP+ K ++ G+ P T +L +C +P
Sbjct: 206 ---------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPS 254
Query: 237 LRPRMSEVLAILERL 251
RPR +E+ A L +
Sbjct: 255 RRPRFTELKAQLSTI 269
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 34 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 92
+ + Y ++L + + M G L HL + G S A A GL +H+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN 310
Query: 93 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 152
V+YRD K +NILLD + ++SD GLA + + H S +GTHGY APE +
Sbjct: 311 --RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQK 364
Query: 153 G-RLTTKSDVYSFGVVLLELLSG 174
G + +D +S G +L +LL G
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 34 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 92
+ + Y ++L + + M G L HL + G S A A GL +H+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN 310
Query: 93 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 152
V+YRD K +NILLD + ++SD GLA + + H S +GTHGY APE +
Sbjct: 311 --RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQK 364
Query: 153 G-RLTTKSDVYSFGVVLLELLSG 174
G + +D +S G +L +LL G
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 34 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 92
+ + Y ++L + + M G L HL + G S A A GL +H+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN 310
Query: 93 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 152
V+YRD K +NILLD + ++SD GLA + + H S +GTHGY APE +
Sbjct: 311 --RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQK 364
Query: 153 G-RLTTKSDVYSFGVVLLELLSG 174
G + +D +S G +L +LL G
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 34 LVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHD 92
+ + Y ++L + + M G L HL + G S A A GL +H+
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHN 309
Query: 93 AESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVAT 152
V+YRD K +NILLD + ++SD GLA + + H S +GTHGY APE +
Sbjct: 310 --RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQK 363
Query: 153 G-RLTTKSDVYSFGVVLLELLSG 174
G + +D +S G +L +LL G
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 20 LTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
L EV+ L ++ HPN+++L LV++ M KG L ++L + LS K
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 128
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
+ + + LH + +++RD K NILLD + N KL+DFG + G++ V
Sbjct: 129 IMRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SV 183
Query: 139 MGTHGYAAPEYVATGR------LTTKSDVYSFGVVLLELLSG 174
GT Y APE + + D++S GV++ LL+G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
M VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 98 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 155 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 205
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 206 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L HPN++++ Y + + L+ EF P+G L L + G + +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A L + H E +VI+RD K N+L+ + K++DFG + P+ R + GT
Sbjct: 124 --ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGT 175
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
Y PE + K D++ GV+ E L G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L HPN++++ Y + + L+ EF P+G L L + G + +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A L + H E +VI+RD K N+L+ + K++DFG + P+ R + GT
Sbjct: 125 --ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGT 176
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
Y PE + K D++ GV+ E L G D
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ L HPN++++ Y + + L+ EF P+G L L + G + +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
A L + H E +VI+RD K N+L+ + K++DFG + P+ R + GT
Sbjct: 124 --ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGT 175
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVD 179
Y PE + K D++ GV+ E L G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 106/257 (41%), Gaps = 38/257 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
M VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 477
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ A KL D
Sbjct: 478 RSFLQVRKFS-LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSATDCVKLGD 534
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 535 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 585
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 586 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 629
Query: 232 NNEPKLRPRMSEVLAIL 248
+P RPR +E+ A L
Sbjct: 630 AYDPSRRPRFTELKAQL 646
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 79
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R +
Sbjct: 127 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTL 177
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 228
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 229 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 79
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R +
Sbjct: 131 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTL 181
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 182 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 232
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 233 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRMKV 79
E++ L H ++V G+ + + +V E + SL E H R+ +P + ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVSTQV 138
+G +LH ++VI+RD K N+ L+ + K+ DFGLA K G+R +
Sbjct: 127 VLGCQ----YLH--RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTL 177
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
GT Y APE ++ + + DV+S G ++ LL G+ + + + + YL
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---------KETYLR 228
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
K+ + I P+ AA+L + L +P RP ++E+L
Sbjct: 229 IKKNEYSI---------PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 22/254 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE--GENRLLVYEFMPKGS 58
+VV V K++ + +++ E L HPN++ ++G C + L+ +MP GS
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L N L + + +K A+ A+G+ FLH E + + ++++D + A++S
Sbjct: 96 LYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS 155
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
+ + + R + V PE T R + +D++SF V+L EL++
Sbjct: 156 MADVKFSFQSPGRMYAPAWVAPEALQKKPE--DTNRRS--ADMWSFAVLLWELVTR---- 207
Query: 179 DKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
E D LS+ ++ L P + + L C+N +P R
Sbjct: 208 -------EVPFAD-----LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKR 255
Query: 239 PRMSEVLAILERLE 252
P+ ++ ILE+++
Sbjct: 256 PKFDMIVPILEKMQ 269
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 106/257 (41%), Gaps = 38/257 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
M VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 477
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 478 RSFLQVRKFS-LDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 534
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 535 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 585
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 586 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 629
Query: 232 NNEPKLRPRMSEVLAIL 248
+P RPR +E+ A L
Sbjct: 630 AYDPSRRPRFTELKAQL 646
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+ VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 42 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 100
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 101 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 157
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 158 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 208
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 209 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 252
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 253 AYDPSRRPRFTELKAQLSTI 272
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+ VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 67 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 125
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 126 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 182
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 183 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 233
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 234 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 277
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 278 AYDPSRRPRFTELKAQLSTI 297
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+ VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 44 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 102
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 103 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 159
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 160 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 210
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 211 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 254
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 255 AYDPSRRPRFTELKAQLSTI 274
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+ VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 41 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 99
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 100 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 156
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 157 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 207
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 208 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 251
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 252 AYDPSRRPRFTELKAQLSTI 271
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+ VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 39 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 97
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 98 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 155 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 205
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 206 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 1 MVVAVKKLKPEGFQGHKE-WLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL 59
+ VA+K K +E +L E + Q HP++VKLIG E ++ E G L
Sbjct: 36 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGEL 94
Query: 60 ENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSD 119
+ L R L A + A + L +L + ++RD A N+L+ + KL D
Sbjct: 95 RSFLQVR-KYSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGD 151
Query: 120 FGLAKAGPTGDRTHVSTQVMGTHG-----YAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
FGL++ ST + G + APE + R T+ SDV+ FGV + E+
Sbjct: 152 FGLSRY------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI--- 202
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQ---YPQKAAHTAATLALQCL 231
L+ KP+ K ++ G+ P T +L +C
Sbjct: 203 --------------LMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCW 246
Query: 232 NNEPKLRPRMSEVLAILERL 251
+P RPR +E+ A L +
Sbjct: 247 AYDPSRRPRFTELKAQLSTI 266
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFGLAK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 170 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 216
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 135 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWT- 183
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 184 --LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK R
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 195
Query: 136 TQVM-GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T + GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 142 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 188
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLV-YEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
E + + +L HP VKL +C + + +L + G L ++ + G +
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
I +A L +LH +I+RD K NILL+ + + +++DFG AK + + +G
Sbjct: 146 IVSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T Y +PE + SD+++ G ++ +L++G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFR---RGPQPLSWAVRMK 78
E+ L L HPN++K+ + N +V E G L + RG + LS +
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG-KALSEGYVAE 128
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILL-DAEFNA--KLSDFGLAKAGPTGDRTHVS 135
+ L + H V+++D K NIL D ++ K+ DFGLA+ + + S
Sbjct: 129 LMKQMMNALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---S 183
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKP 195
T GT Y APE V +T K D++S GVV+ LL+G T + Q + +P
Sbjct: 184 TNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
Query: 196 -YLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
Y + R L PQ A L Q L +P+ RP ++VL
Sbjct: 243 NYAVECRPL-----------TPQ-----AVDLLKQMLTKDPERRPSAAQVL 277
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 142 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 188
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + +++DFGLAK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 1 MVVAVKKLKPEGFQGHKE---WLTEVN-YLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 56
+ AVK L+ + KE ++E N L + HP LV L + V +++
Sbjct: 64 VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 123
Query: 57 GSLENHLFRR----GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 112
G L HL R P+ +A + A+G +LH ++YRD K NILLD++
Sbjct: 124 GELFYHLQRERCFLEPRARFYAAEIASALG------YLHSL--NIVYRDLKPENILLDSQ 175
Query: 113 FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
+ L+DFGL K + T ++ GT Y APE + D + G VL E+L
Sbjct: 176 GHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 173 SG 174
G
Sbjct: 234 YG 235
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 119
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 120 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 174
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 120
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 121 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 126
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 127 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 181
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ LHHPN+++L Y + L+ E+ P+G L++ + ++ + I
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE----LYKELQKSCTFDEQRTATI 128
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
++ +VI+RD K N+LL + K++DFG + P+ R + GT
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGT 184
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y PE + K D++ GV+ ELL G
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 3 VAVKKLKPEGFQ---GHKEWLTEVNYLGQLHHPNLVKL-------IGYCLEGENRLLVYE 52
VA+KK+ P F K L E+ L H N++ + + Y GE + VY
Sbjct: 83 VAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY---GEFKS-VYV 137
Query: 53 FMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 112
+ + H QPL+ +GL ++H A QVI+RD K SN+L++
Sbjct: 138 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNEN 195
Query: 113 FNAKLSDFGLAKAGPTGDRTH--VSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLL 169
K+ DFG+A+ T H T+ + T Y APE + + T++ D++S G +
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 170 ELLSGR 175
E+L+ R
Sbjct: 256 EMLARR 261
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSL-ENHLFRRG-PQPLSWAVRM 77
L E+ L QL HPNLV L+ LV+E+ L E ++RG P+ L ++
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
+ + + F H + I+RD K NIL+ KL DFG A+ TG + +
Sbjct: 110 Q----TLQAVNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDE 162
Query: 138 VMGTHGYAAPE-YVATGRLTTKSDVYSFGVVLLELLSG 174
V T Y +PE V + DV++ G V ELLSG
Sbjct: 163 V-ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E+ P G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAVRMKVAIGAA 84
++ P LVKL + N +V E+ P G + +HL R G P +A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV------ 152
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
LTF + +IYRD K N+L+D + K++DFG AK RT + GT Y
Sbjct: 153 --LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLCGTPEY 205
Query: 145 AAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
APE + + D ++ GV++ E+ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 3 VAVKKLKPEGFQ---GHKEWLTEVNYLGQLHHPNLVKL-------IGYCLEGENRLLVYE 52
VA+KK+ P F K L E+ L H N++ + + Y GE + VY
Sbjct: 82 VAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY---GEFKS-VYV 136
Query: 53 FMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 112
+ + H QPL+ +GL ++H A QVI+RD K SN+L++
Sbjct: 137 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNEN 194
Query: 113 FNAKLSDFGLAKAGPTGDRTH--VSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLL 169
K+ DFG+A+ T H T+ + T Y APE + + T++ D++S G +
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 170 ELLSGR 175
E+L+ R
Sbjct: 255 EMLARR 260
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 245
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 246 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 300
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P L KL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P L KL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P L KL + N +V E+ P G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + K++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 32/236 (13%)
Query: 26 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 85
+ +L H +LV G C+ G+ +LV EF+ GSL+ +L ++ ++ +++VA A
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAA 124
Query: 86 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--- 142
+ FL E+ +I+ + A NILL E + K + K G +S V+
Sbjct: 125 AMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG----ISITVLPKDILQ 178
Query: 143 ---GYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
+ PE + + L +D +SFG L E+ SG D L
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG---------------DKPLSALD 223
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAP 254
+RKL D Q P A A L C++ EP RP ++ L L P
Sbjct: 224 SQRKLQFYEDRH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK R +
Sbjct: 170 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGA 215
Query: 136 TQVM-GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T + GT Y APE + + D ++ GV++ E+ +G
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 120 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 118 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L+HP ++K+ + + E+ +V E M G L + + G + L A
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYF 259
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN---AKLSDFGLAKAGPTGDRTHVSTQ 137
+ +LH E+ +I+RD K N+LL ++ K++DFG +K G+ + + T
Sbjct: 260 YQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 314
Query: 138 VMGTHGYAAPEY---VATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE V T D +S GV+L LSG
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 119 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 117 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 32 PNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 90
P LV L Y + E +L L+ +++ G L HL +R +++ +G L
Sbjct: 119 PFLVTL-HYAFQTETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIV-LALE 173
Query: 91 HDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV 150
H + +IYRD K NILLD+ + L+DFGL+K D T + GT Y AP+ V
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE-FVADETERAYDFCGTIEYMAPDIV 232
Query: 151 ATGRL--TTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRK------ 202
G D +S GV++ ELL+G A P+ D K
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTG------------------ASPFTVDGEKNSQAEI 274
Query: 203 LFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
RI+ ++ YPQ+ + A L + L +PK R
Sbjct: 275 SRRILKSE--PPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 39/248 (15%)
Query: 28 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG----- 82
L H N+V+ +G E + E +P GSL + L R PL + IG
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK---DNEQTIGFYTKQ 130
Query: 83 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAK--AGPTGDRTHVSTQVM 139
+GL +LHD +Q+++RD K N+L++ K+SDFG +K AG +
Sbjct: 131 ILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI----NPCTETFT 184
Query: 140 GTHGYAAPEYVATG--RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
GT Y APE + G +D++S G ++E+ +G+ + +P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK-----------PPFYELGEP-- 231
Query: 198 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 257
+ +F++ K+ + P+ + A L+C +P R +++L E K S
Sbjct: 232 --QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD----EFLKVS 285
Query: 258 AKLSQSEP 265
+K +++P
Sbjct: 286 SKKKKTQP 293
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
E++ + QLHHP L+ L + +L+ EF+ G L + + + +S A +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYM 155
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQV 138
A +GL +H E +++ D K NI+ + + + K+ DFGLA + V+T
Sbjct: 156 RQACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT-- 211
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T +AAPE V + +D+++ GV+ LLSG
Sbjct: 212 -ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 69 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 128
+P++ + + A+G+ FL + + I+RD A NILL K+ DFGLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 129 GDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS 188
+ APE + +TKSDV+S+GV+L E+ S G
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGSPYP 303
Query: 189 LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAIL 248
V + + S R+ R+ + P+ + + L C + +PK RPR +E++ L
Sbjct: 304 GVQMDEDFCSRLREGMRM-------RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Query: 249 ERL 251
L
Sbjct: 357 GDL 359
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 2 VVAVKKLKPEGFQG--HKEWLTEVNYLGQL-HHPNLVKLIGYCL-EGENRLLVYEFMPKG 57
VAVK LK EG +K +TE+ L + HH N+V L+G C +G +++ E+ G
Sbjct: 59 TVAVKMLK-EGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 58 SLENHL 63
+L N+L
Sbjct: 118 NLSNYL 123
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
+A K +K G + +E E++ + QL H NL++L + +LV E++ G L +
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 63 LFRRGPQ--PLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DAEFNAKL 117
+ L + MK +G+ +H + +++ D K NIL DA+ K+
Sbjct: 177 IIDESYNLTELDTILFMK---QICEGIRHMH--QMYILHLDLKPENILCVNRDAK-QIKI 230
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA+ ++ V+ GT + APE V ++ +D++S GV+ LLSG
Sbjct: 231 IDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 143 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 23 VNYLGQLHHPNLVKLIGYCL----EGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
+ +L HPN+V+L C + E +L LV+E + + L +L + P+P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETI 122
Query: 78 K-VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
K + +GL FLH +V++RD K NIL+ + KL+DFGLA+ T
Sbjct: 123 KDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALT 177
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
V+ T Y APE + T D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 32/236 (13%)
Query: 26 LGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAK 85
+ +L H +LV G C G+ +LV EF+ GSL+ +L ++ ++ +++VA A
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAW 124
Query: 86 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH--- 142
+ FL E+ +I+ + A NILL E + K + K G +S V+
Sbjct: 125 AMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG----ISITVLPKDILQ 178
Query: 143 ---GYAAPEYVATGR-LTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS 198
+ PE + + L +D +SFG L E+ SG D L
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG---------------DKPLSALD 223
Query: 199 DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAP 254
+RKL D Q P A A L C++ EP RP ++ L L P
Sbjct: 224 SQRKLQFYEDRH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 143 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 23 VNYLGQLHHPNLVKLIGYCL----EGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
+ +L HPN+V+L C + E +L LV+E + + L +L + P+P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETI 122
Query: 78 K-VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
K + +GL FLH +V++RD K NIL+ + KL+DFGLA+ T
Sbjct: 123 KDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALT 177
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
V+ T Y APE + T D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 140 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 28 QLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIG----- 82
L H N+V+ +G E + E +P GSL + L R PL + IG
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK---DNEQTIGFYTKQ 116
Query: 83 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGT 141
+GL +LHD +Q+++RD K N+L++ K+SDFG +K + GT
Sbjct: 117 ILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGT 172
Query: 142 HGYAAPEYVATG--RLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSD 199
Y APE + G +D++S G ++E+ +G+ + +P
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK-----------PPFYELGEP---- 217
Query: 200 KRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
+ +F++ K+ + P+ + A L+C +P R +++L
Sbjct: 218 QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 23 VNYLGQLHHPNLVKLIGYCL----EGENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRM 77
+ +L HPN+V+L C + E +L LV+E + + L +L + P+P +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETI 122
Query: 78 K-VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
K + +GL FLH +V++RD K NIL+ + KL+DFGLA+ T
Sbjct: 123 KDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALT 177
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
V+ T Y APE + T D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 145 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 124 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW--AVRMKV 79
E + L HP++V+L+ +V+EFM L + +R + AV
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVST 136
+ L + HD + +I+RD K N+LL ++ N+ KL DFG+A G+ V+
Sbjct: 136 MRQILEALRYCHD--NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAG 191
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT + APE V DV+ GV+L LLSG
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLE-GENRL-LVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
E+ L +L HPN+VKL+ + E+ L +V+E + +G + + +PLS
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
KG+ +LH ++I+RD K SN+L+ + + K++DFG++ D +T +
Sbjct: 143 FQDLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--V 198
Query: 140 GTHGYAAPEYVATGR--LTTKS-DVYSFGVVLLELLSGRC 176
GT + APE ++ R + K+ DV++ GV L + G+C
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK R
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGR 194
Query: 136 TQVM-GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
T + GT Y APE + + D ++ GV++ E+ +G
Sbjct: 195 TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
+ E++ L +L H N+VKL + +LV+E + + L L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSF 105
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
+ G+ + HD +V++RD K N+L++ E K++DFGLA+A R + T +
Sbjct: 106 LLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEI 161
Query: 140 GTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSG 174
T Y AP+ + + + +T D++S G + E+++G
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 150 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 196
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 139 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWA-VRMKV 79
E+ L ++ H N+V L + LV + + G L + + RG A + ++
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNIL-LDAEFNAKL--SDFGLAKAGPTGDRTHVST 136
+ A K +LH E+ +++RD K N+L L E N+K+ +DFGL+K G + +
Sbjct: 115 VLSAVK---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMS 165
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
GT GY APE +A + D +S GV+ LL G
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 142 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 170 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 216
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
+ E++ L +L H N+VKL + +LV+E + + L L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSF 105
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
+ G+ + HD +V++RD K N+L++ E K++DFGLA+A R + T +
Sbjct: 106 LLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEV 161
Query: 140 GTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSG 174
T Y AP+ + + + +T D++S G + E+++G
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 144 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 190
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 191 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
+ E++ L +L H N+VKL + +LV+E + + L L
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSF 105
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
+ G+ + HD +V++RD K N+L++ E K++DFGLA+A R + T +
Sbjct: 106 LLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEV 161
Query: 140 GTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLSG 174
T Y AP+ + + + +T D++S G + E+++G
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
E+ + L HP LV L + E+ +V + + G L HL ++ V++ +
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFI 121
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
L +L + ++I+RD K NILLD + ++DF +A P T ++T +
Sbjct: 122 C-ELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MA 175
Query: 140 GTHGYAAPEYVATGR---LTTKSDVYSFGVVLLELLSGR 175
GT Y APE ++ + + D +S GV ELL GR
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E + + +L HP VKL + E + G L ++ + G + I
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+A L +LH +I+RD K NILL+ + + +++DFG AK + + +GT
Sbjct: 139 VSA--LEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
Y +PE + SD+++ G ++ +L++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 136 QIV--------LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR--VKGRT--- 182
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 183 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
K+ + K L L + ++I+RD K SNILLD N KL DFG+ +G D + T+
Sbjct: 129 KITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGI--SGQLVD-SIAKTR 184
Query: 138 VMGTHGYAAPEYV--ATGR--LTTKSDVYSFGVVLLELLSGR 175
G Y APE + + R +SDV+S G+ L EL +GR
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EVN L ++ HPN++ L + +L+ E + G L + L + A + I
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD KL DFG+A G+
Sbjct: 125 --LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDW 192
+ GT + APE V L ++D++S GV+ LLSG +T I D+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 237
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
+ Y S+ +L + +L + P++ A +L
Sbjct: 238 DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 271
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+++D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EVN L ++ HPN++ L + +L+ E + G L + L + A + I
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD KL DFG+A G+
Sbjct: 118 --LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 170
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDW 192
+ GT + APE V L ++D++S GV+ LLSG +T I D+
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
+ Y S+ +L + +L + P++ A +L
Sbjct: 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 EVNYLGQLHHPNLVKLIGY---CLEGENRL-LVYEFMPKGSLENHLFRRGPQPL----SW 73
E L L HPN+V+ ++G+ + LV E G+L+ +L R + SW
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW 134
Query: 74 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDA-EFNAKLSDFGLAKAGPTGDRT 132
++ KGL FLH +I+RD K NI + + K+ D GLA T R
Sbjct: 135 CRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRA 184
Query: 133 HVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE 170
+ V+GT + APE + DVY+FG LE
Sbjct: 185 SFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 3 VAVKKLKPEGFQGHKEWL--TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPK 56
VAVK Q W TE+ L H N++ I + N L+ +
Sbjct: 34 VAVKIFSSRDEQS---WFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEH 90
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLD 110
GSL + L R+ +P + +++A+ AA GL LH + + +RDFK+ N+L+
Sbjct: 91 GSLYDFLQRQTLEP---HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVK 147
Query: 111 AEFNAKLSDFGLAKAGPTG-DRTHVSTQ-VMGTHGYAAPEYVATGRLTTK-------SDV 161
+ ++D GLA G D + +GT Y APE V ++ T +D+
Sbjct: 148 SNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE-VLDEQIRTDCFESYKWTDI 206
Query: 162 YSFGVVLLEL 171
++FG+VL E+
Sbjct: 207 WAFGLVLWEI 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VAVKKL +P Q H K E+ L ++H N++ L+ E ++ LV E M
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIHMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + T + T Y APE + D++S G ++ EL+ G
Sbjct: 165 LKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
Query: 175 RCAVDKTKVGIEQ 187
C + + I+Q
Sbjct: 222 -CVIFQGTDHIDQ 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EVN L ++ HPN++ L + +L+ E + G L + L + A + I
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD KL DFG+A G+
Sbjct: 139 --LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 191
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDW 192
+ GT + APE V L ++D++S GV+ LLSG +T I D+
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 251
Query: 193 AKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
+ Y S+ +L + +L + P++ A +L
Sbjct: 252 DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 2 VVAVKKLKPEGFQGHKEWL-TEVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSL 59
+ AVK + + +G + + E+ L ++ H N+V L E N L LV + + G L
Sbjct: 49 LFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED-IYESPNHLYLVMQLVSGGEL 107
Query: 60 ENHLFRRG---PQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DAEF 113
+ + +G + S +R + + +LH +++RD K N+L D E
Sbjct: 108 FDRIVEKGFYTEKDASTLIRQVL-----DAVYYLH--RMGIVHRDLKPENLLYYSQDEES 160
Query: 114 NAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLS 173
+SDFGL+K GD V + GT GY APE +A + D +S GV+ LL
Sbjct: 161 KIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 217
Query: 174 G 174
G
Sbjct: 218 G 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 26 LGQLHHPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
L HPN+V+L+ C LV+E + + L +L + P L +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 126
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
+GL FLH + +++RD K NIL+ + KL+DFGLA+ T V+
Sbjct: 127 RQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTPVVV 181
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
T Y APE + T D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 2 VVAVKKLKP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGY----CLEGENRLLVYEFMPK 56
+VA+KK++P + L E+ L H N++ + E N + + + + +
Sbjct: 38 IVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ 97
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + Q LS + + LH S VI+RD K SN+L+++ + K
Sbjct: 98 TDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLK 152
Query: 117 LSDFGLAK---------AGPTGDRTHVSTQVMGTHGYAAPEYVAT-GRLTTKSDVYSFGV 166
+ DFGLA+ + PTG ++ + T+ + T Y APE + T + + DV+S G
Sbjct: 153 VCDFGLARIIDESAADNSEPTGQQSGM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 167 VLLELLSGR 175
+L EL R
Sbjct: 212 ILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 2 VVAVKKLKP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGY----CLEGENRLLVYEFMPK 56
+VA+KK++P + L E+ L H N++ + E N + + + + +
Sbjct: 38 IVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ 97
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + Q LS + + LH S VI+RD K SN+L+++ + K
Sbjct: 98 TDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLK 152
Query: 117 LSDFGLAK---------AGPTGDRTHVSTQVMGTHGYAAPEYVAT-GRLTTKSDVYSFGV 166
+ DFGLA+ + PTG ++ + T+ + T Y APE + T + + DV+S G
Sbjct: 153 VCDFGLARIIDESAADNSEPTGQQSGM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 167 VLLELLSGR 175
+L EL R
Sbjct: 212 ILAELFLRR 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 22/254 (8%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE--GENRLLVYEFMPKGS 58
+VV V K++ + +++ E L HPN++ ++G C + L+ + P GS
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGS 95
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLS 118
L N L + + +K A+ A+G FLH E + + ++ +D + A++S
Sbjct: 96 LYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARIS 155
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV 178
+ + + R + V PE T R + +D +SF V+L EL++
Sbjct: 156 XADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNRRS--ADXWSFAVLLWELVTR---- 207
Query: 179 DKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLR 238
E D + + K L + T G P + L C N +P R
Sbjct: 208 -------EVPFADLSNXEIGXKVALEGLRPTIPPGISPH-----VSKLXKICXNEDPAKR 255
Query: 239 PRMSEVLAILERLE 252
P+ ++ ILE+ +
Sbjct: 256 PKFDXIVPILEKXQ 269
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y APE + + D ++ GV++ ++ +G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 2 VVAVKKLKPEGFQGHK-EWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
+VA+K+++ E +G + EV+ L L H N+V L ++ LV+E++ K L+
Sbjct: 29 LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLK 87
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDF 120
+L G V++ +GL + H +V++RD K N+L++ KL+DF
Sbjct: 88 QYLDDCGNIINMHNVKL-FLFQLLRGLAYCH--RQKVLHRDLKPQNLLINERGELKLADF 144
Query: 121 GLAKAGPTGDRTHVSTQVMGTHGYAAPEY-VATGRLTTKSDVYSFGVVLLELLSGR 175
GLA+A +T+ + V T Y P+ + + +T+ D++ G + E+ +GR
Sbjct: 145 GLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 2 VVAVKKLKPEGFQGHKE---WLTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKG 57
VVAVKK+ + FQ + E+ L +L H N+V L+ L +N VY
Sbjct: 36 VVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHENIVNLLN-VLRADNDRDVYLVFDYM 93
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
+ H R L + V K + +LH +++RD K SNILL+AE + K+
Sbjct: 94 ETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSG--GLLHRDMKPSNILLNAECHVKV 150
Query: 118 SDFGLAKAGPT-------------------GDRTHVSTQVMGTHGYAAPEY-VATGRLTT 157
+DFGL+++ D + T + T Y APE + + + T
Sbjct: 151 ADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTK 210
Query: 158 KSDVYSFGVVLLELLSGR 175
D++S G +L E+L G+
Sbjct: 211 GIDMWSLGCILGEILCGK 228
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWA----VRM 77
E + + + P +V+L + + +V E+MP G L N L P WA +
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEV 183
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
+A+ A + +H RD K N+LLD + KL+DFG H T
Sbjct: 184 VLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 138 VMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 174
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
AVKK++ E F+ E+ L P +V L G EG + E + GSL
Sbjct: 121 CAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 175
Query: 63 LFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAE-FNAKLSDF 120
+ +G P R +G A +GL +LH ++++ D KA N+LL ++ +A L DF
Sbjct: 176 VKEQGCLPED---RALYYLGQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDF 230
Query: 121 G---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 171
G L K+ TGD + GT + APE V K DV+S ++L +
Sbjct: 231 GHAVCLQPDGLGKSLLTGD------YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM 284
Query: 172 LSG 174
L+G
Sbjct: 285 LNG 287
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRR---GPQPLSWAVRMKVAIGAAKGL 87
HPN+VKL + + LV E + G L + ++ S+ +R V+ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AV 119
Query: 88 TFLHDAESQVIYRDFKASNILLDAE---FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+ +HD V++RD K N+L E K+ DFG A+ P D + T H Y
Sbjct: 120 SHMHDV--GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTLH-Y 175
Query: 145 AAPEYVATGRLTTKSDVYSFGVVLLELLSGR 175
AAPE + D++S GV+L +LSG+
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDXT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKG-SLENHLFRRGPQPLSWAVRMKVA 80
E G+L P++V + + E + +L V + G L L R+GP AV +
Sbjct: 84 EARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQ 142
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
IG+A + +RD K NIL+ A+ A L DFG+A A T + V G
Sbjct: 143 IGSALDAA----HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-G 197
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDK 200
T Y APE + T ++D+Y+ VL E L+G ++ + + ++ A P S
Sbjct: 198 TLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTV 257
Query: 201 R 201
R
Sbjct: 258 R 258
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
K+A+ K L LH S VI+RD K SN+L++A K+ DFG+ +G D T
Sbjct: 157 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDSV-AKTI 212
Query: 138 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 193
G Y APE + + KSD++S G+ ++EL R D W
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WG 261
Query: 194 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
P+ ++L ++++ K + QCL K RP E++
Sbjct: 262 TPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSA--GIIHRDLKPSNIVVKSDXT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VAVKKL +P Q H K E+ L ++H N++ L+ E ++ LV E M
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 110 DANLCQVIHMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 162
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + T + T Y APE + D++S G ++ EL+ G
Sbjct: 163 LKILDFGLARTASTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDXT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 166 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 223 KILFPGRDYIDQWNKVIEQ 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 166 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 223 KILFPGRDYIDQWNKVIEQ 241
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 158
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 159 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 216 KILFPGRDYIDQWNKVIEQ 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 2 VVAVKKLKP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGY----CLEGENRLLVYEFMPK 56
+VA+KK++P + L E+ L H N++ + E N + + + + +
Sbjct: 38 IVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ 97
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
L + Q LS + + LH S VI+RD K SN+L+++ + K
Sbjct: 98 TDLHRVI---STQMLSDDHIQYFIYQTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLK 152
Query: 117 LSDFGLAK---------AGPTGDRTHVSTQVMGTHGYAAPEYVAT-GRLTTKSDVYSFGV 166
+ DFGLA+ + PTG ++ + + + T Y APE + T + + DV+S G
Sbjct: 153 VCDFGLARIIDESAADNSEPTGQQSGM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 167 VLLELLSGR 175
+L EL R
Sbjct: 212 ILAELFLRR 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 111 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 164 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 220
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 221 KILFPGRDYIDQWNKVIEQ 239
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 105 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 157
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 158 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 215 KILFPGRDYIDQWNKVIEQ 233
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT Y AP + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 158
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 159 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 216 KILFPGRDYIDQWNKVIEQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
AVKK++ E F+ E+ L P +V L G EG + E + GSL
Sbjct: 102 CAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 156
Query: 63 LFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAE-FNAKLSDF 120
+ +G P R +G A +GL +LH ++++ D KA N+LL ++ +A L DF
Sbjct: 157 VKEQGCLPED---RALYYLGQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDF 211
Query: 121 GLA---KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
G A + G + GT + APE V K DV+S ++L +L+G
Sbjct: 212 GHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 26 LGQLHHPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
L HPN+V+L+ C LV+E + + L +L + P L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
+GL FLH + +++RD K NIL+ + KL+DFGLA+ V+
Sbjct: 119 RQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPVVV 173
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
T Y APE + T D++S G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 39/263 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
+ GT + APE V L ++D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 198 SDKRKL----FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
D ++ ++ + +Y + A + L +PK R + I + L+
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR------MTIQDSLQH 272
Query: 254 PKNSAKLSQSEPHRQTGPVTVRK 276
P K +Q R+ V + K
Sbjct: 273 PWIKPKDTQQALSRKASAVNMEK 295
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 150 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 202
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 203 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 260 KILFPGRDYIDQWNKVIEQ 278
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 150 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 202
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 203 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 260 KILFPGRDYIDQWNKVIEQ 278
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
AVKK++ E F+ + E+ L P +V L G EG + E + GSL
Sbjct: 86 CAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 140
Query: 63 LFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAEFN-AKLSDF 120
+ + G P R +G A +GL +LH ++++ D KA N+LL ++ + A L DF
Sbjct: 141 IKQMGCLPED---RALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDF 195
Query: 121 G---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 171
G L K+ TGD + GT + APE V K D++S ++L +
Sbjct: 196 GHALCLQPDGLGKSLLTGD------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 249
Query: 172 LSG 174
L+G
Sbjct: 250 LNG 252
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 26 LGQLHHPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
L HPN+V+L+ C LV+E + + L +L + P L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
+GL FLH + +++RD K NIL+ + KL+DFGLA+ V+
Sbjct: 119 RQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDPVVV 173
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
T Y APE + T D++S G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
AVKK++ E F+ + E+ L P +V L G EG + E + GSL
Sbjct: 102 CAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 156
Query: 63 LFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAEFN-AKLSDF 120
+ + G P R +G A +GL +LH ++++ D KA N+LL ++ + A L DF
Sbjct: 157 IKQMGCLPED---RALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDF 211
Query: 121 G---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 171
G L K+ TGD + GT + APE V K D++S ++L +
Sbjct: 212 GHALCLQPDGLGKSLLTGD------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 265
Query: 172 LSG 174
L+G
Sbjct: 266 LNG 268
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSA--GIIHRDLKPSNIVVKSDXT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ LV E M
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 105 DANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSA--GIIHRDLKPSNIVVKSDXT 157
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 158 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 215 KILFPGRDYIDQWNKVIEQ 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 32/243 (13%)
Query: 3 VAVKKL-KP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMP 55
VAVKKL KP + K E+ L + H N++ L+ LE N + + +
Sbjct: 62 VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 121
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 122 GADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCEL 176
Query: 116 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 174
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+G
Sbjct: 177 KILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
R T ++ + + R++ T G + +K + +A +Q L
Sbjct: 232 RTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQM 277
Query: 235 PKL 237
PK+
Sbjct: 278 PKM 280
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
Query: 4 AVKKLK-PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
A+K+++ P ++ + EV L +L HP +V+ LE + PK L
Sbjct: 34 AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQ 93
Query: 63 L-FRRGPQPLSW------------AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 109
+ R W +V + + + A+ + FLH +++RD K SNI
Sbjct: 94 MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFF 151
Query: 110 DAEFNAKLSDFGLAKAGPTGDRTHV----------STQVMGTHGYAAPEYVATGRLTTKS 159
+ K+ DFGL A + T +GT Y +PE + + K
Sbjct: 152 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV 211
Query: 160 DVYSFGVVLLELL 172
D++S G++L ELL
Sbjct: 212 DIFSLGLILFELL 224
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 83 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 142
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 143 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 200
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 307
Query: 201 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ R + + P L C + EP RP SE++ L L
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 74 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 133
V + + I A+ + FLH +++RD K SNI + K+ DFGL A +
Sbjct: 164 GVCLHIFIQIAEAVEFLH--SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 134 VSTQVM----------GTHGYAAPEYVATGRLTTKSDVYSFGVVLLELL-SGRCAVDKTK 182
M GT Y +PE + + K D++S G++L ELL S +++ +
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR 281
Query: 183 VGIEQSLVDWAKPYLSDKRKL-FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM 241
+ ++D R L F ++ T+ +YPQ+ + L+ P RP
Sbjct: 282 I-------------ITDVRNLKFPLLFTQ---KYPQEHM-----MVQDMLSPSPTERPEA 320
Query: 242 SEVL--AILERL 251
++++ AI E L
Sbjct: 321 TDIIENAIFENL 332
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 26 LGQLHHPNLVKLIGYCLEGENR-----LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
L HPN+V+L+ C LV+E + + L +L + P L +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG 140
+GL FLH + +++RD K NIL+ + KL+DFGLA+ V+
Sbjct: 119 RQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFPVVV 173
Query: 141 THGYAAPEYVATGRLTTKSDVYSFGVVLLELL 172
T Y APE + T D++S G + E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 83 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 142
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 143 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 200
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 309
Query: 201 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ R + + P L C + EP RP SE++ L L
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L E+ L +L H N+V+L + LV+EF + L+ + F L +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSF 106
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
KGL F H V++RD K N+L++ KL+DFGLA+A R + + V
Sbjct: 107 LFQLLKGLGFCH--SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV- 163
Query: 140 GTHGYAAPEYVATGRL-TTKSDVYSFGVVLLEL 171
T Y P+ + +L +T D++S G + EL
Sbjct: 164 -TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
AVKK++ E F+ + E+ L P +V L G EG + E + GSL
Sbjct: 100 CAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 154
Query: 63 LFRRGPQPLSWAVRMKVAIGAA-KGLTFLHDAESQVIYRDFKASNILLDAEFN-AKLSDF 120
+ + G P R +G A +GL +LH ++++ D KA N+LL ++ + A L DF
Sbjct: 155 IKQMGCLPED---RALYYLGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDF 209
Query: 121 G---------LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLEL 171
G L K+ TGD + GT + APE V K D++S ++L +
Sbjct: 210 GHALCLQPDGLGKSLLTGD------YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 263
Query: 172 LSG 174
L+G
Sbjct: 264 LNG 266
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 83 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 142
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 143 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 200
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 300
Query: 201 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ R + + P L C + EP RP SE++ L L
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 21/171 (12%)
Query: 83 AAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTH 142
AKG+ FL A + I+RD A NILL + K+ DFGLA+
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 143 GYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPY--LSDK 200
+ APE + T +SDV+SFGV+L E+ S +G A PY +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------LG--------ASPYPGVKID 302
Query: 201 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERL 251
+ R + + P L C + EP RP SE++ L L
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRG----PQPLSWAV 75
L E L ++ P LVKL + N +V E++ G + +HL R G P +A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 76 RMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVS 135
++ LTF + +IYRD K N+L+D + +++DFG AK RT
Sbjct: 149 QIV--------LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT--- 195
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT APE + + D ++ GV++ E+ +G
Sbjct: 196 WXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L Q+ HPN++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 57 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 116 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 170
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 171 LKILDFGLARH--TADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 226 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 271
Query: 234 EPKL 237
PK+
Sbjct: 272 MPKM 275
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVA 80
TE+ L +L HPN++KL LV E + G L + + +G A
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 81 IGAAKGLTFLHDAESQVIYRDFKASNILL-----DAEFNAKLSDFGLAKAGPTGDRTHVS 135
I + + +LH E+ +++RD K N+L DA K++DFGL+K + +
Sbjct: 157 I--LEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPL--KIADFGLSK---IVEHQVLM 207
Query: 136 TQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
V GT GY APE + + D++S G++ LL G
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 57 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 116 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 170
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 171 LKILDFGLARH--TADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 226 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 271
Query: 234 EPKL 237
PK+
Sbjct: 272 MPKM 275
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 57 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 116 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 170
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 171 LKILDFGLARH--TADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 226 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 271
Query: 234 EPKL 237
PK+
Sbjct: 272 MPKM 275
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
K+A+ K L LH S VI+RD K SN+L++A K+ DFG+ +G D
Sbjct: 113 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDDVAKDID 169
Query: 138 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 193
G Y APE + + KSD++S G+ ++EL R D W
Sbjct: 170 A-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WG 217
Query: 194 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 245
P+ ++L ++++ K + QCL K RP E++
Sbjct: 218 TPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 55 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 114 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXE 168
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 169 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 224 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 269
Query: 234 EPKL 237
PK+
Sbjct: 270 MPKM 273
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 55 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 114 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXE 168
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 169 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 224 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 269
Query: 234 EPKL 237
PK+
Sbjct: 270 MPKM 273
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 120
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 70 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 128
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 129 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 183
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 184 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 239 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 284
Query: 234 EPKL 237
PK+
Sbjct: 285 MPKM 288
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 73 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 131
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 132 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 186
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 187 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 242 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 287
Query: 234 EPKL 237
PK+
Sbjct: 288 MPKM 291
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 52 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 110
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 111 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 166 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 221 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 266
Query: 234 EPKL 237
PK+
Sbjct: 267 MPKM 270
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL FQ + E +L HPN+V+L E LV++ + G L
Sbjct: 61 IINTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 117
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + S A + + + H + +++R+ K N+LL ++ KL+
Sbjct: 118 DIVAR--EFYSEADASHCIQQILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLA 173
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + H GT GY +PE + + D+++ GV+L LL G
Sbjct: 174 DFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 98/247 (39%), Gaps = 56/247 (22%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEF-MPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 89
HP +++L+ + E +LV E +P L +++ +GP +G F
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP------------LGEGPSRCF 144
Query: 90 L--------HDAESQVIYRDFKASNILLDAEFN-AKLSDFGLAKAGPTGDRTHVS--TQV 138
H V++RD K NIL+D AKL DFG +G H T
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG------SGALLHDEPYTDF 198
Query: 139 MGTHGYAAPEYVATGRL-TTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
GT Y+ PE+++ + + V+S G++L +++ G ++ + +E L
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL-------- 250
Query: 198 SDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEAPKNS 257
+P + L +CL +P RP + E+L + ++ P
Sbjct: 251 ----------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL-LDPWMQTPAED 293
Query: 258 AKLSQSE 264
L+ S+
Sbjct: 294 VPLNPSK 300
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA----VR 76
E + + + P +V+L Y + + L +V E+MP G L N L P WA
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
+ +A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 137 QVMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 174
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 234 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 32/243 (13%)
Query: 3 VAVKKL-KP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMP 55
VAVKKL +P + K E+ L + H N++ L+ LE N + + +
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 116 GADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCEL 170
Query: 116 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 174
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+G
Sbjct: 171 KILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
R T ++ + + R++ T G + +K + +A +Q L
Sbjct: 226 RTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQM 271
Query: 235 PKL 237
PK+
Sbjct: 272 PKM 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 55 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 114 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 168
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 169 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 224 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 269
Query: 234 EPKL 237
PK+
Sbjct: 270 MPKM 273
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 52 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 110
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 111 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 166 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 221 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 266
Query: 234 EPKL 237
PK+
Sbjct: 267 MPKM 270
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 49 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 107
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 108 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 162
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 163 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 218 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 263
Query: 234 EPKL 237
PK+
Sbjct: 264 MPKM 267
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 120
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 121 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 175
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 62 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 120
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 121 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 175
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 176 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 231 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 276
Query: 234 EPKL 237
PK+
Sbjct: 277 MPKM 280
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 62 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 120
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 121 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 175
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 176 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 231 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 276
Query: 234 EPKL 237
PK+
Sbjct: 277 MPKM 280
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 52 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 110
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 111 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 166 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 221 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 266
Query: 234 EPKL 237
PK+
Sbjct: 267 MPKM 270
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 57 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 115
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 116 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 170
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 171 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 226 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 271
Query: 234 EPKL 237
PK+
Sbjct: 272 MPKM 275
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 69 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 127
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 128 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 182
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 183 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 238 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 283
Query: 234 EPKL 237
PK+
Sbjct: 284 MPKM 287
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL FQ + E +L HPN+V+L E LV++ + G L
Sbjct: 37 IINTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 93
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + S A + + + H + +++R+ K N+LL ++ KL+
Sbjct: 94 DIVAR--EFYSEADASHCIQQILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLA 149
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + H GT GY +PE + + D+++ GV+L LL G
Sbjct: 150 DFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + A I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 124 --LNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 39/261 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
+ GT + APE V L ++D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 198 SDKRKL----FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
D ++ ++ + +Y + A + L +PK R + I + L+
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR------MTIQDSLQH 272
Query: 254 PKNSAKLSQSEPHRQTGPVTV 274
P K +Q R+ V +
Sbjct: 273 PWIKPKDTQQALSRKASAVNM 293
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 55 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 113
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 114 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 168
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 169 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 224 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 269
Query: 234 EPKL 237
PK+
Sbjct: 270 MPKM 273
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 194
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 203
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 241
Query: 204 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
R++ T G + +K + +A +Q L PK+
Sbjct: 242 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQL-HHPNLVKLIGYCLE------GENRLLVYEFM 54
+ A+K + G + +E E+N L + HH N+ G ++ + LV EF
Sbjct: 51 LAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
GS+ + + L + +GL+ LH + +VI+RD K N+LL
Sbjct: 110 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAE 167
Query: 115 AKLSDFGLAKAGPTGDRT-HVSTQVMGTHGYAAPEYVATGR-----LTTKSDVYSFGVVL 168
KL DFG++ DRT +GT + APE +A KSD++S G+
Sbjct: 168 VKLVDFGVS---AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA 224
Query: 169 LELLSG 174
+E+ G
Sbjct: 225 IEMAEG 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 147 RGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEM---TGYVATRWY 199
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKL 203
APE + ++ D++S G ++ ELL+GR T ++ + +
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQLKLI 246
Query: 204 FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
R++ T G + +K + +A +Q L PK+
Sbjct: 247 LRLVGTP-GAELLKKISSESARNYIQSLTQMPKM 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA----VR 76
E + + + P +V+L Y + + L +V E+MP G L N L P WA
Sbjct: 119 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 176
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
+ +A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 177 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 137 QVMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 174
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 229 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 47 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 105
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 106 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 160
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 161 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 216 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 261
Query: 234 EPKL 237
PK+
Sbjct: 262 MPKM 265
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + +VY +++P
Sbjct: 47 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRL-LVYEFMPKGSLENHLFRRGPQPLSWA----VR 76
E + + + P +V+L Y + + L +V E+MP G L N L P WA
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAE 181
Query: 77 MKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVST 136
+ +A+ A + F+H RD K N+LLD + KL+DFG T
Sbjct: 182 VVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 137 QVMGTHGYAAPEYVAT----GRLTTKSDVYSFGVVLLELLSG 174
V GT Y +PE + + G + D +S GV L E+L G
Sbjct: 234 AV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL FQ + E +L HPN+V+L E LV++ + G L
Sbjct: 38 IINTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + S A + + + H + +++R+ K N+LL ++ KL+
Sbjct: 95 DIVAR--EFYSEADASHCIQQILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + H GT GY +PE + + D+++ GV+L LL G
Sbjct: 151 DFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 47 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 105
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 106 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 160
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 161 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 216 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 261
Query: 234 EPKL 237
PK+
Sbjct: 262 MPKM 265
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 61 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 119
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 120 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 174
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 175 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 230 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 275
Query: 234 EPKL 237
PK+
Sbjct: 276 MPKM 279
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 32/243 (13%)
Query: 3 VAVKKL-KP-EGFQGHKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFMP 55
VAVKKL +P + K E+ L + H N++ L+ LE N + + +
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 56 KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 116 GADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSEL 170
Query: 116 KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSG 174
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+G
Sbjct: 171 KILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 175 RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNE 234
R T ++ + + R++ T G + +K + +A +Q L
Sbjct: 226 RTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQM 271
Query: 235 PKL 237
PK+
Sbjct: 272 PKM 274
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 46 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 105 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 159
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 160 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 215 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 260
Query: 234 EPKL 237
PK+
Sbjct: 261 MPKM 264
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 52 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 110
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 111 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSE 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 166 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 221 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 266
Query: 234 EPKL 237
PK+
Sbjct: 267 MPKM 270
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 48 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 106
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 107 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 161
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 162 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 217 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 262
Query: 234 EPKL 237
PK+
Sbjct: 263 MPKM 266
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 194
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
APE + ++ D++S G ++ ELL+GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 43/265 (16%)
Query: 3 VAVKKLKPEGFQGH---KEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEF---MPK 56
VA+KKL FQ K E+ L + H N++ L+ + Y+F MP
Sbjct: 70 VAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP- 127
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAK 116
++ L + S + KGL ++H A V++RD K N+ ++ + K
Sbjct: 128 -FMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELK 184
Query: 117 LSDFGLAKAGPTGDRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLELL 172
+ DFGLA+ H ++ G T Y APE + + ++ D++S G ++ E+L
Sbjct: 185 ILDFGLAR--------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 236
Query: 173 SGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLN 232
+G+ K YL ++ ++ G ++ QK AA +Q L
Sbjct: 237 TGKTLFK-------------GKDYLDQLTQILKVTGVP-GTEFVQKLNDKAAKSYIQSLP 282
Query: 233 NEPK-----LRPRMS-EVLAILERL 251
P+ L PR S + +LE++
Sbjct: 283 QTPRKDFTQLFPRASPQAADLLEKM 307
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL FQ + E +L HPN+V+L E LV++ + G L
Sbjct: 38 IINTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + S A + + + H + +++R+ K N+LL ++ KL+
Sbjct: 95 DIVAR--EFYSEADASHCIQQILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + H GT GY +PE + + D+++ GV+L LL G
Sbjct: 151 DFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GR 175
GR
Sbjct: 219 GR 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 14 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLS- 72
G +W+T ++Y Q NL ++ Y + G+ L+ +F R P+ ++
Sbjct: 130 NGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFED----------RLPEEMAR 178
Query: 73 -WAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDR 131
+ M +AI + L ++H RD K NIL+D + +L+DFG + D
Sbjct: 179 FYLAEMVIAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDG 229
Query: 132 THVSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSG 174
T S+ +GT Y +PE + GR + D +S GV + E+L G
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 60 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 118
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 119 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 173
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 174 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
Query: 174 GR 175
GR
Sbjct: 229 GR 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 165 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 217
Query: 145 AAPEYVATG-RLTTKSDVYSFGVVLLELLSGR 175
APE + D++S G ++ ELL+GR
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 208
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
APE + ++ D++S G ++ ELL+GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 207
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
APE + ++ D++S G ++ ELL+GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 46 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 105 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 159
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 160 LKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 174 GR 175
GR
Sbjct: 215 GR 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ + L HP LV L + +++YEFM G L + + +S ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMR 156
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA--KLSDFGLAKAGPTGDRTHVSTQVM 139
KGL +H E+ ++ D K NI+ + + KL DFGL V+T
Sbjct: 157 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 211
Query: 140 GTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSG 174
GT +AAPE VA G+ + +D++S GV+ LLSG
Sbjct: 212 GTAEFAAPE-VAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDAT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S GV++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ QG E+ + +L H N+V+L + GE + VY +++P
Sbjct: 47 LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
E+ + L HP LV L + +++YEFM G L + + +S ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMR 262
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA--KLSDFGLAKAGPTGDRTHVSTQVM 139
KGL +H E+ ++ D K NI+ + + KL DFGL V+T
Sbjct: 263 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 317
Query: 140 GTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELLSG 174
GT +AAPE VA G+ + +D++S GV+ LLSG
Sbjct: 318 GTAEFAAPE-VAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 165
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 166 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDAT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S GV++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 117 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 169
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 170 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 226
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 227 KILFPGRDYIDQWNKVIEQ 245
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ T D T + T Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWY 184
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGR 175
APE + ++ D++S G ++ ELL+GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 39/262 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYL 197
+ GT + APE V L ++D++S GV+ LLSG A P+L
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFL 218
Query: 198 SDKRKL----FRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAILERLEA 253
D ++ ++ + +Y + A + L +PK R + I + L+
Sbjct: 219 GDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR------MTIQDSLQH 272
Query: 254 PKNSAKLSQSEPHRQTGPVTVR 275
P K +Q R+ V +
Sbjct: 273 PWIKPKDTQQALSRKASAVNME 294
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L ++ HPN++ L + +L+ E + G L + L + + L+ +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLK 121
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH Q+ + D K NI LLD K+ DFGLA G+
Sbjct: 122 QILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 20/187 (10%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIG--YCLEGENRLLVY-----EF 53
M VA+KK+ + ++E L + L LHHPN+V+L Y L +R +Y E+
Sbjct: 49 MSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107
Query: 54 MPKG---SLENHLFRR-GPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL 109
+P N+ R+ P P+ V + I + + LH V +RD K N+L+
Sbjct: 108 VPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI---RSIGCLHLPSVNVCHRDIKPHNVLV 164
Query: 110 -DAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVV 167
+A+ KL DFG AK + + + + Y APE + TT D++S G +
Sbjct: 165 NEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCI 221
Query: 168 LLELLSG 174
E++ G
Sbjct: 222 FAEMMLG 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 158
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E
Sbjct: 159 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 215
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 216 KILFPGRDYIDQWNKVIEQ 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KSQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DFGL + T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFGLCRH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 40/247 (16%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLE 170
K+ DFGLA+ H ++ G T Y APE + ++ D++S G ++ E
Sbjct: 164 LKILDFGLAR--------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 171 LLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 230
LL+GR T ++ + + R++ T G + +K + +A +Q
Sbjct: 216 LLTGRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQS 261
Query: 231 LNNEPKL 237
L PK+
Sbjct: 262 LTQMPKM 268
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 40/247 (16%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 73 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 131
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 132 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 186
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLE 170
K+ DFGLA+ H ++ G T Y APE + ++ D++S G ++ E
Sbjct: 187 LKILDFGLAR--------HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 238
Query: 171 LLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQC 230
LL+GR T ++ + + R++ T G + +K + +A +Q
Sbjct: 239 LLTGRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQS 284
Query: 231 LNNEPKL 237
L PK+
Sbjct: 285 LTQMPKM 291
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 28/157 (17%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 141
+GL ++H A+ +I+RD K SN+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVAT 205
Query: 142 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDK 200
Y APE + ++ D++S G ++ ELL+GR T ++
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-------------HIDQL 252
Query: 201 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKL 237
+ + R++ T G + +K + +A +Q L PK+
Sbjct: 253 KLILRLVGTP-GAELLKKISSESARNYIQSLAQMPKM 288
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ QG E+ + +L H N+V+L + GE + VY +++P
Sbjct: 47 LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ +PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ D+GLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDYGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLE 170
K+ DFGLA+ H ++ G T Y APE + ++ D++S G ++ E
Sbjct: 164 LKILDFGLAR--------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 215
Query: 171 LLSGR 175
LL+GR
Sbjct: 216 LLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 34/177 (19%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMG---T 141
KGL ++H A V++RD K N+ ++ + K+ DFGLA+ H ++ G T
Sbjct: 137 KGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVT 186
Query: 142 HGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDK 200
Y APE + + ++ D++S G ++ E+L+G+ K YL
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-------------GKDYLDQL 233
Query: 201 RKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK-----LRPRMS-EVLAILERL 251
++ ++ G ++ QK AA +Q L P+ L PR S + +LE++
Sbjct: 234 TQILKVTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 289
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 29/266 (10%)
Query: 30 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 89
HPN++ L +G+ +V E M G L + + R+ + S V K + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEY 131
Query: 90 LHDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 145
LH V++RD K SNIL +D N ++ DFG AK + ++ T +
Sbjct: 132 LH--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANFV 187
Query: 146 APEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFR 205
APE + D++S GV+L +L+G P + + L R
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN-------------GPDDTPEEILAR 234
Query: 206 IMDTK--LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA---ILERLEAPKNSAKL 260
I K L G Y + TA L + L+ +P R + VL I+ + P+
Sbjct: 235 IGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN- 293
Query: 261 SQSEPHRQTGPVTVRKSPMRQQRSPL 286
Q PH G + S + + +SP+
Sbjct: 294 RQDAPHLVKGAMAATYSALNRNQSPV 319
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 47 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 20 LTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKV 79
L E+ L +L H N+V+L + LV+EF + L+ + F L +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSF 106
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVM 139
KGL F H V++RD K N+L++ KL++FGLA+A R + + V
Sbjct: 107 LFQLLKGLGFCH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV- 163
Query: 140 GTHGYAAPEYVATGRL-TTKSDVYSFGVVLLEL 171
T Y P+ + +L +T D++S G + EL
Sbjct: 164 -TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 66 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 121
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 122 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 178
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 179 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 235
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 236 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 289
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 290 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 55 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 110
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 111 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIH--SFGICHRDIKPQNLLLDPDT 167
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 168 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 224
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 225 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 278
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 279 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 47 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 48 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 103
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 104 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 160
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 161 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 217
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 218 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 271
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 272 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 300
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 46 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 105 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 159
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMG---THGYAAPEYVATGRLTTKS-DVYSFGVVLLE 170
K+ DFGLA+ H ++ G T Y APE + ++ D++S G ++ E
Sbjct: 160 LKILDFGLAR--------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 211
Query: 171 LLSGR 175
LL+GR
Sbjct: 212 LLTGR 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 60 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 115
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 116 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIH--SFGICHRDIKPQNLLLDPDT 172
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 173 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 229
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 230 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 283
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 284 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 312
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 47 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 59 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 114
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 115 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 171
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 172 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 229 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 282
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 283 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 311
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 81 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 137 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 193
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 194 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 251 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 304
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 305 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 333
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 81 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 137 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIH--SFGICHRDIKPQNLLLDPDT 193
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 194 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 251 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 304
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 305 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 333
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW--AVRMKV 79
E + L HP++V+L+ +V+EFM L + +R + AV
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVST 136
+ L + HD + +I+RD K +LL ++ N+ KL FG+A G+ V+
Sbjct: 138 MRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 193
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT + APE V DV+ GV+L LLSG
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 114 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 166
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + + T Y APE + D++S G ++ E++ G
Sbjct: 167 LKILDFGLARTAGT---SFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 59 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 114
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 115 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 171
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 172 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 229 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 282
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 283 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 311
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 51 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 106
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 107 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 163
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 164 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 220
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 221 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 274
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 275 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 303
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 83 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 138
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 139 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 195
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 196 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 252
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 253 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 306
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 307 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 335
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW--AVRMKV 79
E + L HP++V+L+ +V+EFM L + +R + AV
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 80 AIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSDFGLAKAGPTGDRTHVST 136
+ L + HD + +I+RD K +LL ++ N+ KL FG+A G+ V+
Sbjct: 136 MRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 191
Query: 137 QVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+GT + APE V DV+ GV+L LLSG
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 75 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 130
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 131 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIH--SFGICHRDIKPQNLLLDPDT 187
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 188 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 244
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 245 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 298
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 299 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 327
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 85 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 140
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 141 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 197
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 198 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 254
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 255 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 308
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 309 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 337
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ QG E+ + +L H N+V+L + GE + VY +++P
Sbjct: 47 LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 103 ATVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 159
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ +PQ AH +
Sbjct: 217 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKV---- 270
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 271 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 299
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 126 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 181
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 182 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDPDT 238
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 239 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 295
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 296 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 349
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 350 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 378
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 34/275 (12%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL-IGYCLEGENRLLVY-----EFMP 55
+VA+KK+ Q + E+ + +L H N+V+L + GE + VY +++P
Sbjct: 52 LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 107
Query: 56 KG--SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEF 113
+ + H + R Q L + L ++H + +RD K N+LLD +
Sbjct: 108 ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIH--SFGICHRDIKPQNLLLDPDT 164
Query: 114 NA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLEL 171
KL DFG AK G+ + + + Y APE + T+ DV+S G VL EL
Sbjct: 165 AVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 221
Query: 172 LSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGG-QYPQKAAHTAATLALQC 230
L G+ + G++Q LV+ K + R+ R M+ ++PQ AH +
Sbjct: 222 LLGQ-PIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV---- 275
Query: 231 LNNEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR E +A+ RL +A+L+ E
Sbjct: 276 ------FRPRTPPEAIALCSRLLEYTPTARLTPLE 304
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDAT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 39/270 (14%)
Query: 4 AVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLE----GENRLLVYEFMPKGSL 59
A+K++ Q +E E + +HPN+++L+ YCL L+ F +G+L
Sbjct: 58 ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 60 ENHLFRRGPQP--LSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
N + R + L+ + + +G +GL +H +RD K +NILL E L
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH--AKGYAHRDLKPTNILLGDEGQPVL 175
Query: 118 SDFG---LAKAGPTGDRTHVSTQVMG----THGYAAPEYVATGR---LTTKSDVYSFGVV 167
D G A G R ++ Q T Y APE + + ++DV+S G V
Sbjct: 176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235
Query: 168 LLELLSGRCAVDKT-KVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL 226
L ++ G D + G +L + LS PQ H++A
Sbjct: 236 LYAMMFGEGPYDMVFQKGDSVALA--VQNQLS----------------IPQSPRHSSALW 277
Query: 227 AL--QCLNNEPKLRPRMSEVLAILERLEAP 254
L + +P RP + +L+ LE L+ P
Sbjct: 278 QLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDAT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQ------ 137
+ L+++H +I+RD K NI +D N K+ DFGLAK + D + +Q
Sbjct: 127 EALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 138 -----VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 172
+GT Y A E + TG K D+YS G++ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLV-----GIKHLHSA--GIIHRDLKPSNIVVKSDAT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
K+ DFGLA+ T + + T + T Y APE + D++S G ++ E++ G
Sbjct: 165 LKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQ------ 137
+ L+++H +I+RD K NI +D N K+ DFGLAK + D + +Q
Sbjct: 127 EALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 138 -----VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 172
+GT Y A E + TG K D+YS G++ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ G + +V+ T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTA--GTSFMMEPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 28/186 (15%)
Query: 3 VAVKKL-KPEGFQGH---KEWLTEVNYLGQLHHPNLVKLIGYCLEGE------NRLLVYE 52
VA+KKL +P FQ K E+ L + H N++ L+ E + LV
Sbjct: 53 VAIKKLYRP--FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110
Query: 53 FMPK--GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLD 110
FM G L H + G + + V + KGL ++H A +I+RD K N+ ++
Sbjct: 111 FMGTDLGKLMKHE-KLGEDRIQFLVYQML-----KGLRYIHAA--GIIHRDLKPGNLAVN 162
Query: 111 AEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATG-RLTTKSDVYSFGVVLL 169
+ K+ DFGLA+ + V T+ Y APE + R T D++S G ++
Sbjct: 163 EDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMA 217
Query: 170 ELLSGR 175
E+++G+
Sbjct: 218 EMITGK 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 49 LVYEFMPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
LV+E M GS+ +H+ RR L +V V A L FLH+ + +RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 108 LLDAEFN---AKLSDFGLAKAGP-TGDRTHVSTQVM----GTHGYAAPEYV-----ATGR 154
L + K+ DFGL GD + +ST + G+ Y APE V
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 155 LTTKSDVYSFGVVLLELLS------GRCAVD 179
+ D++S GV+L LLS GRC D
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 44/206 (21%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNY--LGQLHHPNLVKLIGYCLEGENR---------LLVY 51
VAVK F + ++ E N + + H N+ + I G+ R LLV
Sbjct: 39 VAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV----GDERVTADGRMEYLLVM 91
Query: 52 EFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDA-------ESQVIYRDFKA 104
E+ P GSL +L W ++A +GL +LH + + +RD +
Sbjct: 92 EYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148
Query: 105 SNILLDAEFNAKLSDFGLA------KAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTK 158
N+L+ + +SDFGL+ + G+ + + +GT Y APE V G + +
Sbjct: 149 RNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLR 207
Query: 159 S--------DVYSFGVVLLELLSGRC 176
D+Y+ G++ E+ RC
Sbjct: 208 DXESALKQVDMYALGLIYWEIFM-RC 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ FGLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILGFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 78 KVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQ 137
K+A+ K L LH S VI+RD K SN+L++A K DFG+ +G D
Sbjct: 140 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGI--SGYLVDDVAKDID 196
Query: 138 VMGTHGYAAPEYV----ATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWA 193
G Y APE + + KSD++S G+ +EL R D W
Sbjct: 197 A-GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS-----------WG 244
Query: 194 KPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
P+ ++L ++++ K + QCL K RP E+
Sbjct: 245 TPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ DF LA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDFYLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 3 VAVKKL-KPEGFQGH-KEWLTEVNYLGQLHHPNLVKLIGYCL------EGENRLLVYEFM 54
VA+KKL +P Q H K E+ + ++H N++ L+ E ++ +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
+ + +S+ + + G+ LH A +I+RD K SNI++ ++
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLE---- 170
K+ DFGLA+ G + +V+ T Y APE + D++S G ++ E
Sbjct: 165 LKILDFGLARTA--GTSFMMEPEVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 221
Query: 171 --LLSGRCAVDKTKVGIEQ 187
L GR +D+ IEQ
Sbjct: 222 KILFPGRDYIDQWNKVIEQ 240
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ D GLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDAGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK + + T+ T Y APE + + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKETTSHNSL---TEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 25/191 (13%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL--------------IGYCLEGENRL 48
VA+KK+ Q K L E+ + +L H N+VK+ +G E +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNIL 108
+V E+M + L N + +GP L R+ +GL ++H A V++RD K +N+
Sbjct: 99 IVQEYM-ETDLAN-VLEQGPL-LEEHARL-FMYQLLRGLKYIHSA--NVLHRDLKPANLF 152
Query: 109 LDAE-FNAKLSDFGLAKAGP--TGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSF 164
++ E K+ DFGLA+ + H+S ++ T Y +P + + TK+ D+++
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAA 211
Query: 165 GVVLLELLSGR 175
G + E+L+G+
Sbjct: 212 GCIFAEMLTGK 222
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ D GLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDRGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L++ E M G L + + RG Q + ++ + FLH + +RD K N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH--SHNIAHRDVKPENL 140
Query: 108 LLDA-EFNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTHGYAAPEYVATGRLTTKSDVYS 163
L + E +A KL+DFG AK + T + Q T Y APE + + D++S
Sbjct: 141 LYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 164 FGVVLLELLSG 174
GV++ LL G
Sbjct: 196 LGVIMYILLCG 206
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 14 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 73
G +W+T ++Y Q +L ++ Y + G+ L+ +F K + F G
Sbjct: 130 NGDCQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG------ 182
Query: 74 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 133
M +AI + L ++H RD K N+LLD + +L+DFG + D T
Sbjct: 183 --EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTV 231
Query: 134 VSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSGR 175
S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 232 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 34/244 (13%)
Query: 3 VAVKKLKPEGFQG---HKEWLTEVNYLGQLHHPNLVKLIGY-----CLEGENRLLVYEFM 54
VAVKKL FQ K E+ L + H N++ L+ LE N + + +
Sbjct: 50 VAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 55 PKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFN 114
L N + Q L+ + +GL ++H A+ +I+RD K SN+ ++ +
Sbjct: 109 MGADLNNIV---KCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 163
Query: 115 AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
K+ D GLA+ T D T + T Y APE + ++ D++S G ++ ELL+
Sbjct: 164 LKILDGGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNN 233
GR T ++ + + R++ T G + +K + +A +Q L
Sbjct: 219 GRTLFPGTD-------------HIDQLKLILRLVGTP-GAELLKKISSESARNYIQSLTQ 264
Query: 234 EPKL 237
PK+
Sbjct: 265 MPKM 268
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAI 81
EV+ L Q+ H N++ L + +L+ E + G L + L ++ + LS
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIK 122
Query: 82 GAAKGLTFLHDAESQVIYRDFKASNI-LLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQ 137
G+ +LH ++ + D K NI LLD + KL DFGLA G
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 138 VMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ GT + APE V L ++D++S GV+ LLSG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 1 MVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLE 60
M++ KKL + H++ E L HPN+V+L E + L+++ + G L
Sbjct: 42 MIINTKKLSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 98
Query: 61 NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KL 117
+ R + A I A LH + V++R+ K N+LL ++ KL
Sbjct: 99 EDIVAREYYSEADASHCIQQILEA----VLHCHQMGVVHRNLKPENLLLASKLKGAAVKL 154
Query: 118 SDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+DFGLA + GT GY +PE + D+++ GV+L LL G
Sbjct: 155 ADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 250 GVIMYILLCG 259
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 198
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 199 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 256 GVIMYILLCG 265
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L++ E M G L + + RG Q + ++ + FLH + +RD K N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH--SHNIAHRDVKPENL 159
Query: 108 LLDA-EFNA--KLSDFGLAKAGPTGDRTHVSTQV-MGTHGYAAPEYVATGRLTTKSDVYS 163
L + E +A KL+DFG AK + T + Q T Y APE + + D++S
Sbjct: 160 LYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 164 FGVVLLELLSG 174
GV++ LL G
Sbjct: 215 LGVIMYILLCG 225
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 146
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 204 GVIMYILLCG 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 13/127 (10%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEF---NAKLSDFGLAKAGPTGDRTHVSTQVMGT 141
+G+ +LH ++ +++ D K NILL + + + K+ DFG+++ G + ++MGT
Sbjct: 142 EGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGT 196
Query: 142 HGYAAPEYVATGRLTTKSDVYSFGVVLLELLSGRCAV-----DKTKVGIEQSLVDWAKPY 196
Y APE + +TT +D+++ G++ LL+ +T + I Q VD+++
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEET 256
Query: 197 LSDKRKL 203
S +L
Sbjct: 257 FSSVSQL 263
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 14 QGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSW 73
G +W+T ++Y Q +L ++ Y + G+ L+ +F K + F G
Sbjct: 146 NGDCQWITALHYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG------ 198
Query: 74 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTH 133
M +AI + L ++H RD K N+LLD + +L+DFG + D T
Sbjct: 199 --EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTV 247
Query: 134 VSTQVMGTHGYAAPEYV-----ATGRLTTKSDVYSFGVVLLELLSGR 175
S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 248 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 152
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 153 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 210 GVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 154
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 155 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 212 GVIMYILLCG 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 147
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 148 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 205 GVIMYILLCG 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 148
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 206 GVIMYILLCG 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 153
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 154 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 211 GVIMYILLCG 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL + H++ E L HPN+V+L E + L+++ + G L
Sbjct: 54 IINTKKLSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE 110
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + A I A LH + V++RD K N+LL ++ KL+
Sbjct: 111 DIVAREYYSEADASHCIQQILEA----VLHCHQMGVVHRDLKPENLLLASKLKGAAVKLA 166
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + GT GY +PE + D+++ GV+L LL G
Sbjct: 167 DFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENL 162
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D++S
Sbjct: 163 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 165 GVVLLELLSG 174
GV++ LL G
Sbjct: 220 GVIMYILLCG 229
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 134 RGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 176
APE + ++ D++S G ++ ELL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 30 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 89
HPN++ L +G++ LV E M G L + + R+ A + IG K + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEY 136
Query: 90 LHDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 145
LH V++RD K SNIL +D N ++ DFG AK + ++ T +
Sbjct: 137 LH--SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFV 192
Query: 146 APEYVATGRLTTKSDVYSFGVVLLELLSG 174
APE + D++S G++L +L+G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 32/273 (11%)
Query: 3 VAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRL------LVYEFMPK 56
VA+KK+ Q + E+ + + HPN+V L + ++ LV E++P+
Sbjct: 67 VAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE 122
Query: 57 GSLE-NHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA 115
+ + + Q + + + L ++H + +RD K N+LLD
Sbjct: 123 TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI--GICHRDIKPQNLLLDPPSGV 180
Query: 116 -KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELLS 173
KL DFG AK G+ + + + Y APE + TT D++S G V+ EL+
Sbjct: 181 LKLIDFGSAKILIAGEP---NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ 237
Query: 174 GRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTK-LGGQYPQKAAHTAATLALQCLN 232
G+ + + GI+Q LV+ K + R+ + M+ + ++PQ H + +
Sbjct: 238 GQ-PLFPGESGIDQ-LVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKV------ 289
Query: 233 NEPKLRPRM-SEVLAILERLEAPKNSAKLSQSE 264
RPR + + ++ RL SA+L+ E
Sbjct: 290 ----FRPRTPPDAIDLISRLLEYTPSARLTAIE 318
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 176
APE + ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGY 144
+GL ++H A +I+RD K SN+ ++ + ++ DFGLA+ +V+T+ Y
Sbjct: 142 RGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 145 AAPEYVATGRLTTKS-DVYSFGVVLLELLSGRC 176
APE + ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 86 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------- 138
G F+H ES +I+RD K +N LL+ + + K+ DFGLA+ + T++ +
Sbjct: 141 GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 139 -------------MGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
+ T Y APE + TKS D++S G + ELL+
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 49 LVYEFMPKGSLENHLF-RRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
LV+E M GS+ +H+ RR L +V V A L FLH+ + +RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 108 LLDAEFN---AKLSDFGLAKAGP-TGDRTHVSTQVM----GTHGYAAPEYV-----ATGR 154
L + K+ DF L GD + +ST + G+ Y APE V
Sbjct: 143 LCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 155 LTTKSDVYSFGVVLLELLS------GRCAVD 179
+ D++S GV+L LLS GRC D
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 30 HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTF 89
HPN++ L +G++ LV E M G L + + R+ A + IG K + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEY 136
Query: 90 LHDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYA 145
LH V++RD K SNIL +D N ++ DFG AK + ++ T +
Sbjct: 137 LH--SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFV 192
Query: 146 APEYVATGRLTTKSDVYSFGVVLLELLSG 174
APE + D++S G++L +L+G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 113/286 (39%), Gaps = 43/286 (15%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFL 90
HPN++ L +G+ +V E G L + + R+ + S V K + +L
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYL 132
Query: 91 HDAESQVIYRDFKASNIL-LDAEFN---AKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
H V++RD K SNIL +D N ++ DFG AK + + T T + A
Sbjct: 133 H--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTPCY-TANFVA 188
Query: 147 PEYVATGRLTTKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRI 206
PE + D++S GV+L L+G P + + L RI
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN-------------GPDDTPEEILARI 235
Query: 207 MDTK--LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL-------------AILERL 251
K L G Y + TA L + L+ +P R + VL L R
Sbjct: 236 GSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQ 295
Query: 252 EAP---KNSAKLSQSEPHRQTGPVT--VRKSPMRQQRSPLNMTPTA 292
+AP K + + S +R PV V +S + Q+R +T TA
Sbjct: 296 DAPHLVKGAXAATYSALNRNQSPVLEPVGRSTLAQRRGIKKITSTA 341
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 85 KGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAK-AGPTGDRTHVSTQ------ 137
+ L+++H +I+R+ K NI +D N K+ DFGLAK + D + +Q
Sbjct: 127 EALSYIH--SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 138 -----VMGTHGYAAPEYV-ATGRLTTKSDVYSFGVVLLELL 172
+GT Y A E + TG K D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 32/202 (15%)
Query: 2 VVAVKKLKP--EGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCL--EGENRLLVYEFMPKG 57
VVA+KK+ E K L E+ L +L+H ++VK++ + + E +Y +
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139
Query: 58 SLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKL 117
+ R P L+ + G+ ++H A +++RD K +N L++ + + K+
Sbjct: 140 DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA--GILHRDLKPANCLVNQDCSVKV 197
Query: 118 SDFGLAKA-------------GPTGDRTHVST---------QVMG---THGYAAPEYVAT 152
DFGLA+ P D ++ T Q+ G T Y APE +
Sbjct: 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL 257
Query: 153 GRLTTKS-DVYSFGVVLLELLS 173
T++ DV+S G + ELL+
Sbjct: 258 QENYTEAIDVWSIGCIFAELLN 279
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 48 LLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
L+V E + G L + + RG Q + ++ + + +LH + +RD K N+
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI--NIAHRDVKPENL 192
Query: 108 LLDAEF-NA--KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSF 164
L ++ NA KL+DFG AK T ++T T Y APE + + D +S
Sbjct: 193 LYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 165 GVVLLELLSG 174
GV+ LL G
Sbjct: 250 GVIXYILLCG 259
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL + H++ E L H N+V+L E LV++ + G L
Sbjct: 36 IINTKKLSA---RDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + A I A LH + V++RD K N+LL ++ KL+
Sbjct: 93 DIVAREYYSEADASHCIQQILEA----VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLA 148
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA GD+ GT GY +PE + D+++ GV+L LL G
Sbjct: 149 DFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 46/178 (25%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 78
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAK- 124
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 125 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 125 --AGPTGDRTHVSTQVMGTHGYAAPEYVATG-------RLTTKSDVYSFGVVLLELLS 173
+G + RT+++ GT G+ APE + RLT D++S G V +LS
Sbjct: 178 LDSGQSSFRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 12/176 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL + H++ E L HPN+V+L E LV++ + G L
Sbjct: 63 IINTKKLSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE 119
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + A I + HD +++RD K N+LL ++ KL+
Sbjct: 120 DIVAREYYSEADASHCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLA 175
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA + GT GY +PE + D+++ GV+L LL G
Sbjct: 176 DFGLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 86 GLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV------- 138
G F+H ES +I+RD K +N LL+ + + K+ DFGLA+ + H+ +
Sbjct: 143 GEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 139 ----------------MGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLS 173
+ T Y APE + T S D++S G + ELL+
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 3 VAVKKL----KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGE---NRL-----LV 50
VA+KK+ + EGF L E+ L L H N+V LI C NR LV
Sbjct: 46 VALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 103
Query: 51 YEFMP---KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
++F G L N L + + ++M + GL ++H +++++RD KA+N+
Sbjct: 104 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIH--RNKILHRDMKAANV 156
Query: 108 LLDAEFNAKLSDFGLAKA 125
L+ + KL+DFGLA+A
Sbjct: 157 LITRDGVLKLADFGLARA 174
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 3 VAVKKL----KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGE---NRL-----LV 50
VA+KK+ + EGF L E+ L L H N+V LI C NR LV
Sbjct: 46 VALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLV 103
Query: 51 YEFMP---KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
++F G L N L + + ++M + GL ++H +++++RD KA+N+
Sbjct: 104 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIH--RNKILHRDMKAANV 156
Query: 108 LLDAEFNAKLSDFGLAKA 125
L+ + KL+DFGLA+A
Sbjct: 157 LITRDGVLKLADFGLARA 174
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 3 VAVKKL----KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGE---NRL-----LV 50
VA+KK+ + EGF L E+ L L H N+V LI C NR LV
Sbjct: 46 VALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 103
Query: 51 YEFMP---KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
++F G L N L + + ++M + GL ++H +++++RD KA+N+
Sbjct: 104 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIH--RNKILHRDMKAANV 156
Query: 108 LLDAEFNAKLSDFGLAKA 125
L+ + KL+DFGLA+A
Sbjct: 157 LITRDGVLKLADFGLARA 174
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 3 VAVKKL----KPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGE---NRL-----LV 50
VA+KK+ + EGF L E+ L L H N+V LI C NR LV
Sbjct: 45 VALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102
Query: 51 YEFMP---KGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNI 107
++F G L N L + + ++M + GL ++H +++++RD KA+N+
Sbjct: 103 FDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIH--RNKILHRDMKAANV 155
Query: 108 LLDAEFNAKLSDFGLAKA 125
L+ + KL+DFGLA+A
Sbjct: 156 LITRDGVLKLADFGLARA 173
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 78
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKA 125
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 143 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 126 GPTGD---RTHVSTQVMGTHGYAAPEYVATG---RLTTKSDVYSFGVVLLELLS 173
+G R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 196 LDSGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGEN-----RLLVYEFMPKG---SLENHLFRRGP 68
K L E+ L HHPN++ L + E LV E M + + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 69 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 128
Q + + + + GL LH E+ V++RD NILL + + DF LA+
Sbjct: 134 QHIQYFMYHILL-----GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 129 -GDRTHVSTQVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLS 173
++TH T Y APE V + TK D++S G V+ E+ +
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 78
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKA 125
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 143 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 126 GPTGD---RTHVSTQVMGTHGYAAPEYVATG---RLTTKSDVYSFGVVLLELLS 173
+G R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 196 LDSGQXXFRXNLNNPS-GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 17 KEWLTEVNYLGQLHHPNLVKLIGYCLEGEN-----RLLVYEFMPKG---SLENHLFRRGP 68
K L E+ L HHPN++ L + E LV E M + + P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 69 QPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPT 128
Q + + + + GL LH E+ V++RD NILL + + DF LA+
Sbjct: 134 QHIQYFMYHILL-----GLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 129 -GDRTHVSTQVMGTHGYAAPEYVATGRLTTK-SDVYSFGVVLLELLS 173
++TH T Y APE V + TK D++S G V+ E+ +
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 22 EVNYLGQLHHPNLVKLIGYCLEGENR--LLVYEFMPKGSLENHLFRRG------PQPLSW 73
E+ L +L HPN++ L L +R L++++ F R P L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 74 AVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE----FNAKLSDFGLAK----- 124
+ + G+ +LH + V++RD K +NIL+ E K++D G A+
Sbjct: 128 GMVKSLLYQILDGIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 125 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKV 183
P D V+ T Y APE + R TK+ D+++ G + ELL+ +
Sbjct: 186 LKPLADL----DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 184 GIEQSLVDWAKPYLSDK-RKLFRIM 207
I+ S PY D+ ++F +M
Sbjct: 242 DIKTS-----NPYHHDQLDRIFNVM 261
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDF 102
LV ++ GSL ++L R ++ +K+A+ A GL LH + + +RD
Sbjct: 78 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 134
Query: 103 KASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS-TQVMGTHGYAAPEYVATG------R 154
K+ NIL+ ++D GLA + D ++ +GT Y APE +
Sbjct: 135 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 194
Query: 155 LTTKSDVYSFGVVLLELLSGRCAV 178
++D+Y+ G+V E ++ RC++
Sbjct: 195 SFKRADIYAMGLVFWE-IARRCSI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDF 102
LV ++ GSL ++L R ++ +K+A+ A GL LH + + +RD
Sbjct: 79 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 135
Query: 103 KASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS-TQVMGTHGYAAPEYVATG------R 154
K+ NIL+ ++D GLA + D ++ +GT Y APE +
Sbjct: 136 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 195
Query: 155 LTTKSDVYSFGVVLLELLSGRCAV 178
++D+Y+ G+V E ++ RC++
Sbjct: 196 SFKRADIYAMGLVFWE-IARRCSI 218
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 48/273 (17%)
Query: 21 TEVNYLGQLHHPNLVKLIGYCLEGENRL----LVYEFMPKGSLENHLFRRGPQPLSWAVR 76
TE+ + H N++ I ++G L+ ++ GSL ++L L
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSM 136
Query: 77 MKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGD 130
+K+A + GL LH + + +RD K+ NIL+ ++D GLA D
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISD 195
Query: 131 RTHV----STQVMGTHGYAAPEYVATG------RLTTKSDVYSFGVVLLELLSGRCA--- 177
V +T+V GT Y PE + + +D+YSFG++L E ++ RC
Sbjct: 196 TNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGG 253
Query: 178 -VDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPK 236
V++ ++ LV + P D R++ I KL +P + + +CL K
Sbjct: 254 IVEEYQLPY-HDLVP-SDPSYEDMREIVCI--KKLRPSFPNRWSSD------ECLRQMGK 303
Query: 237 LRPRMSEVLA-----ILERLEAPKNSAKLSQSE 264
L M+E A L L K AK+S+S+
Sbjct: 304 L---MTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 26/189 (13%)
Query: 4 AVKKLKPEGFQGHKEWLTEVNYLGQLH-HPNLVKLIGYCL-------EGENRLLVYEFMP 55
A+K+L + ++ + EV ++ +L HPN+V+ G+ L+ +
Sbjct: 57 ALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC 116
Query: 56 KGSLENHLFR---RGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAE 112
KG L L + RGP LS +K+ + + +H + +I+RD K N+LL +
Sbjct: 117 KGQLVEFLKKMESRGP--LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ 174
Query: 113 FNAKLSDFGLAK--------AGPTGDRTHVSTQVM--GTHGYAAPEYV---ATGRLTTKS 159
KL DFG A + R V ++ T Y PE + + + K
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 160 DVYSFGVVL 168
D+++ G +L
Sbjct: 235 DIWALGCIL 243
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDF 102
LV ++ GSL ++L R ++ +K+A+ A GL LH + + +RD
Sbjct: 117 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173
Query: 103 KASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS-TQVMGTHGYAAPEYVATG------R 154
K+ NIL+ ++D GLA + D ++ +GT Y APE +
Sbjct: 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233
Query: 155 LTTKSDVYSFGVVLLELLSGRCAV 178
++D+Y+ G+V E ++ RC++
Sbjct: 234 SFKRADIYAMGLVFWE-IARRCSI 256
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDF 102
LV ++ GSL ++L R ++ +K+A+ A GL LH + + +RD
Sbjct: 81 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 137
Query: 103 KASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS-TQVMGTHGYAAPEYVATG------R 154
K+ NIL+ ++D GLA + D ++ +GT Y APE +
Sbjct: 138 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 197
Query: 155 LTTKSDVYSFGVVLLELLSGRCAV 178
++D+Y+ G+V E ++ RC++
Sbjct: 198 SFKRADIYAMGLVFWE-IARRCSI 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDF 102
LV ++ GSL ++L R ++ +K+A+ A GL LH + + +RD
Sbjct: 104 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 160
Query: 103 KASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS-TQVMGTHGYAAPEYVATG------R 154
K+ NIL+ ++D GLA + D ++ +GT Y APE +
Sbjct: 161 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 220
Query: 155 LTTKSDVYSFGVVLLELLSGRCAV 178
++D+Y+ G+V E ++ RC++
Sbjct: 221 SFKRADIYAMGLVFWE-IARRCSI 243
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 89 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
+ H QV +RD K N LLD K++DFG +KA + +GT Y A
Sbjct: 130 YAH--AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIA 184
Query: 147 PEYVATGRLTTK-SDVYSFGVVLLELLSG 174
PE + K +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 4 AVKKLKPEGFQGHKEWLTEVNYLGQLH-HPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 62
AVK ++ + EV L Q + N+++LI + + LV+E + GS+ H
Sbjct: 42 AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 63 LFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLSD 119
+ ++ A R+ + AA L FLH + +RD K NIL ++ K+ D
Sbjct: 102 IQKQKHFNEREASRVVRDVAAA--LDFLH--TKGIAHRDLKPENILCESPEKVSPVKICD 157
Query: 120 FGLAKAGPTGDR-THVSTQVM----GTHGYAAPEYVA--TGRLT---TKSDVYSFGVVLL 169
F L + T ++T + G+ Y APE V T + T + D++S GVVL
Sbjct: 158 FDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLY 217
Query: 170 ELLSG 174
+LSG
Sbjct: 218 IMLSG 222
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 49 LVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDF 102
LV ++ GSL ++L R ++ +K+A+ A GL LH + + +RD
Sbjct: 84 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 140
Query: 103 KASNILLDAEFNAKLSDFGLA-KAGPTGDRTHVS-TQVMGTHGYAAPEYVATG------R 154
K+ NIL+ ++D GLA + D ++ +GT Y APE +
Sbjct: 141 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 200
Query: 155 LTTKSDVYSFGVVLLELLSGRCAV 178
++D+Y+ G+V E ++ RC++
Sbjct: 201 SFKRADIYAMGLVFWE-IARRCSI 223
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 89 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
+ H QV +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 130 YCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 184
Query: 147 PEYVATGRLTTK-SDVYSFGVVLLELLSG 174
PE + K +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL + H++ E L HPN+V+L E LV++ + G L
Sbjct: 36 IINTKKLSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + S A + + H + +++RD K N+LL ++ KL+
Sbjct: 93 DIVAR--EYYSEADASHCIQQILESVNHCH--LNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA GD+ GT GY +PE + D+++ GV+L LL G
Sbjct: 149 DFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L HPN+V+ L + ++ E+ G L + G A + G++
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL--LSGVS 130
Query: 89 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
+ H Q+ +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 131 YCHSM--QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 185
Query: 147 PEYVATGRLTTK-SDVYSFGVVLLELLSG 174
PE + K +DV+S GV L +L G
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 2 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 61
++ KKL + H++ E L HPN+V+L E LV++ + G L
Sbjct: 36 IINTKKLSA---RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 62 HLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA---KLS 118
+ R + S A + + H + +++RD K N+LL ++ KL+
Sbjct: 93 DIVAR--EYYSEADASHCIQQILESVNHCH--LNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 119 DFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
DFGLA GD+ GT GY +PE + D+++ GV+L LL G
Sbjct: 149 DFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 128
Query: 89 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
+ H QV +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 129 YCH--AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 183
Query: 147 PEYVATGRLTTK-SDVYSFGVVLLELLSG 174
PE + K +DV+S GV L +L G
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 28/148 (18%)
Query: 40 YCLEGENRL-------LVYEFMPKGSL---ENHLFRRGPQPLSWA---VRMKVAIGAAKG 86
YCL E + ++YE+M S+ + + F + V +
Sbjct: 104 YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNS 163
Query: 87 LTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFG----LAKAGPTGDRTHVSTQVMGTH 142
+++H+ E + +RD K SNIL+D KLSDFG + G R GT+
Sbjct: 164 FSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--------GTY 214
Query: 143 GYAAPEYVA--TGRLTTKSDVYSFGVVL 168
+ PE+ + + K D++S G+ L
Sbjct: 215 EFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 3 VAVKKLK----PEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGS 58
VA+K+++ EG G + EV+ L +L H N+++L L++E+ +
Sbjct: 62 VAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AEND 118
Query: 59 LENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNA--- 115
L+ ++ + P +S V G+ F H + ++RD K N+LL +
Sbjct: 119 LKKYM-DKNPD-VSMRVIKSFLYQLINGVNFCH--SRRCLHRDLKPQNLLLSVSDASETP 174
Query: 116 --KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGR-LTTKSDVYSFGVVLLELL 172
K+ DFGLA+A G T + T Y PE + R +T D++S + E+L
Sbjct: 175 VLKIGDFGLARA--FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 46/178 (25%)
Query: 31 HPNLVKLIGYCLEGENRLLVYEF------------MPKGSLENHLFRRGPQPLSWAVRMK 78
HPN+++ YC E +R L S EN ++ P+S ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLD--AEFNAK-----------LSDFGLAKA 125
A G+ LH ++I+RD K NIL+ + F A +SDFGL K
Sbjct: 125 -----ASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 126 GPTGD---RTHVSTQVMGTHGYAAPEYVATG-------RLTTKSDVYSFGVVLLELLS 173
+G R +++ GT G+ APE + RLT D++S G V +LS
Sbjct: 178 LDSGQXXFRXNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 4 AVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL 63
A KK+ + + E+ + L HPN+++L + + LV E G L +
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 97
Query: 64 FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DAEFNAKLSDF 120
+ S A R+ + +A + + H + V +RD K N L + KL DF
Sbjct: 98 VHKRVFRESDAARIMKDVLSA--VAYCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDF 153
Query: 121 GLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
GLA G RT V GT Y +P+ V G + D +S GV++ LL G
Sbjct: 154 GLAARFKPGKMMRTKV-----GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 180
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 215
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 216 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 247
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 248 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 247
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 248 -IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 247
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 248 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 4 AVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHL 63
A KK+ + + E+ + L HPN+++L + + LV E G L +
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 114
Query: 64 FRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQVIYRDFKASNILL---DAEFNAKLSDF 120
+ S A R+ + +A + + H + V +RD K N L + KL DF
Sbjct: 115 VHKRVFRESDAARIMKDVLSA--VAYCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDF 170
Query: 121 GLAKAGPTGD--RTHVSTQVMGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
GLA G RT V GT Y +P+ V G + D +S GV++ LL G
Sbjct: 171 GLAARFKPGKMMRTKV-----GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 213
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD 208
+ R +S V+S G++L +++ G P+ D+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDI------------------PFEHDEE------- 248
Query: 209 TKLGGQ--YPQKAAHTAATLALQCLNNEPKLRPRMSEV 244
+GGQ + Q+ + L CL P RP E+
Sbjct: 249 -IIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 3 VAVKKLKPEGFQGHKEWL--TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPK 56
VAVK + K W TE+ L H N++ I + + L+ +
Sbjct: 34 VAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLD 110
GSL ++L +S +++ + A GL LH + + +RD K+ NIL+
Sbjct: 91 GSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK 147
Query: 111 AEFNAKLSDFGLA--KAGPTGDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVY 162
++D GLA + T + +GT Y APE V + D++
Sbjct: 148 KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW 207
Query: 163 SFGVVLLEL 171
+FG+VL E+
Sbjct: 208 AFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 3 VAVKKLKPEGFQGHKEWL--TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPK 56
VAVK + K W TE+ L H N++ I + + L+ +
Sbjct: 34 VAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLD 110
GSL ++L +S +++ + A GL LH + + +RD K+ NIL+
Sbjct: 91 GSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK 147
Query: 111 AEFNAKLSDFGLA--KAGPTGDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVY 162
++D GLA + T + +GT Y APE V + D++
Sbjct: 148 KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW 207
Query: 163 SFGVVLLEL 171
+FG+VL E+
Sbjct: 208 AFGLVLWEV 216
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 38/156 (24%)
Query: 38 IGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQV 97
I + L G+N +EF+ + + + P PL M A L FLH E+Q+
Sbjct: 99 IAFELLGKN---TFEFLKENNFQ-------PYPLPHVRHM--AYQLCHALRFLH--ENQL 144
Query: 98 IYRDFKASNILL-DAEFNA------------------KLSDFGLAKAGPTGDRTHVSTQV 138
+ D K NIL ++EF +++DFG A T D H +T +
Sbjct: 145 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-I 199
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ T Y PE + DV+S G +L E G
Sbjct: 200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 38/156 (24%)
Query: 38 IGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQV 97
I + L G+N +EF+ + + + P PL M A L FLH E+Q+
Sbjct: 108 IAFELLGKN---TFEFLKENNFQ-------PYPLPHVRHM--AYQLCHALRFLH--ENQL 153
Query: 98 IYRDFKASNILL-DAEFNA------------------KLSDFGLAKAGPTGDRTHVSTQV 138
+ D K NIL ++EF +++DFG A T D H +T +
Sbjct: 154 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-I 208
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ T Y PE + DV+S G +L E G
Sbjct: 209 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 3 VAVKKLKPEGFQGHKEWL--TEVNYLGQLHHPNLVKLIGYCLEGENR----LLVYEFMPK 56
VAVK + K W TE+ L H N++ I + + L+ +
Sbjct: 63 VAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 119
Query: 57 GSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLH------DAESQVIYRDFKASNILLD 110
GSL ++L +S +++ + A GL LH + + +RD K+ NIL+
Sbjct: 120 GSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK 176
Query: 111 AEFNAKLSDFGLA--KAGPTGDRTHVSTQVMGTHGYAAPEY------VATGRLTTKSDVY 162
++D GLA + T + +GT Y APE V + D++
Sbjct: 177 KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW 236
Query: 163 SFGVVLLEL 171
+FG+VL E+
Sbjct: 237 AFGLVLWEV 245
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 38/156 (24%)
Query: 38 IGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLTFLHDAESQV 97
I + L G+N +EF+ + + + P PL M A L FLH E+Q+
Sbjct: 131 IAFELLGKN---TFEFLKENNFQ-------PYPLPHVRHM--AYQLCHALRFLH--ENQL 176
Query: 98 IYRDFKASNILL-DAEFNA------------------KLSDFGLAKAGPTGDRTHVSTQV 138
+ D K NIL ++EF +++DFG A T D H +T +
Sbjct: 177 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA----TFDHEHHTT-I 231
Query: 139 MGTHGYAAPEYVATGRLTTKSDVYSFGVVLLELLSG 174
+ T Y PE + DV+S G +L E G
Sbjct: 232 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 89 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
+ H QV +RD K N LLD K+ FG +K+ + +GT Y A
Sbjct: 130 YCH--AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIA 184
Query: 147 PEYVATGRLTTK-SDVYSFGVVLLELLSG 174
PE + K +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 227
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSG 174
+ R +S V+S G++L +++ G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 29 LHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAAKGLT 88
L HPN+V+ L + +V E+ G L + G A + G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 89 FLHDAESQVIYRDFKASNILLDAE--FNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAA 146
+ H QV +RD K N LLD K+ FG +K+ + +GT Y A
Sbjct: 130 YCH--AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKSTVGTPAYIA 184
Query: 147 PEYVATGRLTTK-SDVYSFGVVLLELLSG 174
PE + K +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 21 TEVNYLGQL--HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
E+ YL +L H +++L Y + + +Y M G+++ + + + + + R
Sbjct: 59 NEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKS 115
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
+ + +H + +++ D K +N L+ + KL DFG+A + V
Sbjct: 116 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 139 MGTHGYAAPEYVATGRLTTKS-----------DVYSFGVVLLELLSGRCAVDKTKVGIEQ 187
+GT Y PE + + ++ DV+S G +L + G+ +
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI------ 226
Query: 188 SLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
++ KL I+D ++P + CL +PK R + E+LA
Sbjct: 227 ---------INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 276
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 21 TEVNYLGQL--HHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMK 78
E+ YL +L H +++L Y + + +Y M G+++ + + + + + R
Sbjct: 103 NEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKS 159
Query: 79 VAIGAAKGLTFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQV 138
+ + +H + +++ D K +N L+ + KL DFG+A + V
Sbjct: 160 YWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 139 MGTHGYAAPEYVATGRLTTKS-----------DVYSFGVVLLELLSGRCAVDKTKVGIEQ 187
+GT Y PE + + ++ DV+S G +L + G+ +
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI------ 270
Query: 188 SLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLA 246
++ KL I+D ++P + CL +PK R + E+LA
Sbjct: 271 ---------INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 232
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSG 174
+ R +S V+S G++L +++ G
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 91 HDAESQVIYRDFKASNILLDAEFNA-KLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEY 149
H V++RD K NIL+D KL DFG +G T V T GT Y+ PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEW 212
Query: 150 VATGRLTTKS-DVYSFGVVLLELLSG 174
+ R +S V+S G++L +++ G
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCG 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,093,442
Number of Sequences: 62578
Number of extensions: 355405
Number of successful extensions: 3346
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 855
Number of HSP's gapped (non-prelim): 1146
length of query: 305
length of database: 14,973,337
effective HSP length: 98
effective length of query: 207
effective length of database: 8,840,693
effective search space: 1830023451
effective search space used: 1830023451
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)