BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021948
         (305 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O43022|YGV8_SCHPO Uncharacterized protein C354.08c OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPBC354.08c PE=4 SV=1
          Length = 865

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 22/234 (9%)

Query: 75  WMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVN--WTNKTLEH 132
           W+     +   + + + G D+ + L        +F+ +A +   +++P+N   TNKTL +
Sbjct: 74  WIEPLWSIKVEDCLYNMGADAVISLLFSRFCRDVFLILAAICCTILIPINIVATNKTLAN 133

Query: 133 SKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASE- 191
           S  + +   L SI NV    N  W H+V+ YVF     ++L R Y+IV  +R  +  S  
Sbjct: 134 SDSQNAYAKL-SIQNVT--GNWTWAHVVICYVFNVLVLFLLARYYQIVMRIRQRYYRSPT 190

Query: 192 -HRRPDQFTVLVRNVPPD--PDESVTQLVEHFFLVNHPDH-YLTHQVVNNANKLSELVNK 247
             +     ++L+ ++P     +  ++ L         P H ++ H + N    L +++ K
Sbjct: 191 YQQSMSSRSLLIMDIPTTMRSNNGLSILASRLKSSEAPMHVHICHAIKN----LPKILKK 246

Query: 248 KKKMQNWLDFYQLKYSRNPARKPS------TKTGFLGLWGKTVDAIDFYTSKIE 295
                  L+    K+ +NP + P        K G L    + VDAID+Y++KIE
Sbjct: 247 HDNAVRSLEAVLAKFFKNPKKLPDDRPVRRVKQGLLT--SEKVDAIDYYSAKIE 298


>sp|O94886|TM63A_HUMAN Transmembrane protein 63A OS=Homo sapiens GN=TMEM63A PE=2 SV=3
          Length = 807

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 33/251 (13%)

Query: 65  DFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVN 124
           DF + L    W+ A  ++ + ++++  G D+  YL      + + + ++ L   V++PVN
Sbjct: 106 DFENELGCCPWLTAIFRLHDDQILEWCGEDAIHYLSFQRHIIFLLVVVSFLSLCVILPVN 165

Query: 125 WTNKTLEHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMR 184
            +   L+     +      +I+N+   ++  W H + A ++ F T          V  MR
Sbjct: 166 LSGDLLDKDPYSFGRT---TIANLQTDNDLLWLHTIFAVIYLFLT----------VGFMR 212

Query: 185 LHFLASEHRRPD--QFTVLVRNVPPDPDESVTQLVEHFFLVNHPDHYLTHQVVN-----N 237
            H  + +++  +  + T+ +  +P D  +   +   HF      D Y T +VV+     N
Sbjct: 213 HHTQSIKYKEENLVRRTLFITGLPRDARKETVE--SHF-----RDAYPTCEVVDVQLCYN 265

Query: 238 ANKLSELVNKKKKMQNWLDFY---QLKYSRNPARKPSTKTGFLG---LWGKTVDAIDFYT 291
             KL  L  +KKK +  L +Y   Q+K  +     P     F     L  +  DAI +YT
Sbjct: 266 VAKLIYLCKEKKKTEKSLTYYTNLQVKTGQRTLINPKPCGQFCCCEVLGCEWEDAISYYT 325

Query: 292 SKIETLKKEVS 302
              + L + ++
Sbjct: 326 RMKDRLLERIT 336


>sp|Q5R826|TM63A_PONAB Transmembrane protein 63A OS=Pongo abelii GN=TMEM63A PE=2 SV=1
          Length = 807

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 33/251 (13%)

Query: 65  DFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVN 124
           DF + L    W+ A  ++ + ++++  G D+  YL      + + + ++ L   V++PVN
Sbjct: 106 DFENELGCCPWLTAIFRLHDDQILEWCGEDAIHYLSFQRHIIFLLVVVSFLSLCVILPVN 165

Query: 125 WTNKTLEHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMR 184
            +   L+     +      +I+N+   ++  W H + A ++ F T          V  MR
Sbjct: 166 LSGDLLDKDPYSFGRT---TIANLQTDNDLLWLHTIFAVIYLFLT----------VGFMR 212

Query: 185 LHFLASEHRRPD--QFTVLVRNVPPDPDESVTQLVEHFFLVNHPDHYLTHQVVN-----N 237
            H  + +++  +  + T+ +  +P D  +   +   HF      D Y T +VV+     N
Sbjct: 213 HHTQSIKYKEENLVRRTLFITGLPRDARKETVE--SHF-----RDAYPTCEVVDVQLCYN 265

Query: 238 ANKLSELVNKKKKMQNWLDFY---QLKYSRNPARKPSTKTGFLGLWGKTV---DAIDFYT 291
             KL  L  ++KK +  L +Y   Q+K  +     P     F     +     DAI +YT
Sbjct: 266 VAKLIYLCKERKKTEKSLTYYTNLQVKTGQRTLINPKPCGQFCCCEVQGCEWEDAISYYT 325

Query: 292 SKIETLKKEVS 302
              + L + ++
Sbjct: 326 RMKDRLLERIT 336


>sp|Q9P1W3|TM63C_HUMAN Transmembrane protein 63C OS=Homo sapiens GN=TMEM63C PE=2 SV=1
          Length = 806

 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 27/242 (11%)

Query: 72  FLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACL-GFAVMVPVNWTNKTL 130
           F SW   ++ M + +LI+  G D+ +Y+ ++   L IF+ I C+    +++P+N+T   L
Sbjct: 106 FCSWFFNSITMKDEDLINKCGDDARIYI-VFQYHLIIFVLIICIPSLGIILPINYTGSVL 164

Query: 131 EHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLAS 190
           + S    S+    +I NV   S   W H ++++ F F T ++          M  H L  
Sbjct: 165 DWS----SHFARTTIVNVSTESKLLWLHSLLSF-FYFITNFMF---------MAHHCLGF 210

Query: 191 EHRRPDQF--TVLVRNVPPDPDESVTQLVEHFFLVNHPDHYLTH-QVVNNANKLSELVNK 247
             R   +   T+++  VP D ++   +L+   F   +P   +T      +   L +L ++
Sbjct: 211 APRNSQKVTRTLMITYVPKDIEDP--ELIIKHFHEAYPGSVVTRVHFCYDVRNLIDLDDQ 268

Query: 248 KKKMQNWLDFYQLKYSRNPAR----KPSTKTGFLGLWG--KTVDAIDFYTSKIETLKKEV 301
           ++       FY  K  +         P  +  F   W   K VDA  +Y+   E L  E 
Sbjct: 269 RRHAMRGRLFYTAKAKKTGKVMIRIHPCARLCFCKCWTCFKEVDAEQYYSELEEQLTDEF 328

Query: 302 SG 303
           + 
Sbjct: 329 NA 330


>sp|Q09809|YAB9_SCHPO Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=SPAC2G11.09 PE=3 SV=2
          Length = 793

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 126/309 (40%), Gaps = 82/309 (26%)

Query: 72  FLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVN------- 124
           +  W+   + +P+  + + AGLD  V+L  + +G+K     + LG  +++PVN       
Sbjct: 68  YYKWLMDLVNIPDDVVQNCAGLDGYVFLLFFKMGIKFLSFASLLGVLIIMPVNKHFRGDA 127

Query: 125 WTNKTLEH-SKLKYS----------------------NIDLL---------SISNVPL-- 150
           + N TL   +K +Y                       N+ +L         ++S++P   
Sbjct: 128 FGNITLSMPAKSEYFFSSPLVKKSIVQSPIIANGSELNVGVLGPSLFNPIGNLSDIPGLP 187

Query: 151 --GSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTVLVRNVPPD 208
             G    + +++  Y  + +  YVL    + +A +R  +LA ++R  D+ TV +  +P +
Sbjct: 188 QPGDGFLYLYVLFTYFISIFLLYVLFSSTKSIADIRQSYLARQNRLTDR-TVFISGLPNE 246

Query: 209 PDESVTQLVEHFFLVNHPDHYLTHQVVNNANKLSELVNKKKKMQNWLDFYQLKYSRN--- 265
                T+ ++ +F         +  +  N + +  L++KK K    L+ Y   Y  N   
Sbjct: 247 --LCSTENLKAYFDKLDVGSIDSLSICRNYSYMDILLSKKSKYVKKLEKYWSIYLSNCKK 304

Query: 266 -------------PARK--------------------PSTKTGFLGLWGKTVDAIDFYTS 292
                        P R                     P  KT F G++G+ +DAIDFY++
Sbjct: 305 LGISTLPPSNYLSPNRAELESTPEQLLEVPWQHHQCHPLIKTHFFGIFGQKIDAIDFYSA 364

Query: 293 KIETLKKEV 301
           K+  + +++
Sbjct: 365 KLYKISQQI 373


>sp|Q91YT8|TM63A_MOUSE Transmembrane protein 63A OS=Mus musculus GN=Tmem63a PE=2 SV=1
          Length = 804

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 31/251 (12%)

Query: 65  DFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVN 124
           DF + L    W+ A  ++ + ++++  G D+  YL      + + + I+ L   V++PVN
Sbjct: 105 DFENELGCCPWLTAIFRLHDDQILEWCGEDAIHYLSFQRHIIFLLVVISFLSLCVILPVN 164

Query: 125 WTNKTLEHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMR 184
            +   L      +      +I+N+   ++  W H V + ++ F T          V  M 
Sbjct: 165 LSGDLLGKDPYSFGRT---TIANLQTDNDLLWLHTVFSVIYLFLT----------VGFMW 211

Query: 185 LHFLASEHRRPDQFTVLVRN---VPPDPDESVTQLVEHFFLVNHPDHYLTH-QVVNNANK 240
            H  +  ++       LVR    +   P E+  + VE  F   +P   +   Q+  +  K
Sbjct: 212 HHTRSIRYKEES----LVRQTLFITGLPREARKETVESHFRDAYPTCEVVDVQLCYSVAK 267

Query: 241 LSELVNKKKKMQNWLDFY---QLKYSR----NPARKPSTKTGFLGLWG-KTVDAIDFYTS 292
           L  L  ++KK +  L +Y   Q K  R    NP  KP  +     + G +  DAI +YT 
Sbjct: 268 LIYLCKERKKTEKSLTYYTNLQAKTGRRTLINP--KPCGQFCCCEVQGCEREDAISYYTR 325

Query: 293 KIETLKKEVSG 303
             ++L + ++ 
Sbjct: 326 MNDSLLERITA 336


>sp|Q8CBX0|TM63C_MOUSE Transmembrane protein 63C OS=Mus musculus GN=Tmem63c PE=2 SV=1
          Length = 802

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 27/242 (11%)

Query: 72  FLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACL-GFAVMVPVNWTNKTL 130
           F SW   +L M + +LI+  G D+ +Y+  +   L IF+ I C+    +++PVN+    L
Sbjct: 104 FSSWFFNSLTMRDRDLINKCGDDARIYI-TFQYHLIIFVLILCIPSLGIILPVNYIGTVL 162

Query: 131 EHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLAS 190
           + +    S+    +I NV   S   W H + A+++              +A M  H L  
Sbjct: 163 DWN----SHFGRTTIVNVSTESKFLWLHSLFAFLYFLIN----------LAFMGHHCLGF 208

Query: 191 EHRRPDQF--TVLVRNVPPDPDESVTQLVEHFFLVNHPDHYLTH-QVVNNANKLSELVNK 247
             ++   F  T+++  VP +  +   +++   F   +P   +T      +   L +L ++
Sbjct: 209 VPKKSLHFTRTLMITYVPTEIQDP--EIISKHFHEAYPGCVVTRVHFCYDVRNLIDLDDQ 266

Query: 248 KKKMQNWLDFYQLKYSRNP----ARKPSTKTGFLGLWG--KTVDAIDFYTSKIETLKKEV 301
           ++       +Y  K  +         P ++  F   W   K VDA  +Y+   E L  E 
Sbjct: 267 RRHAMRGRLYYTAKAKKTGKVMIKTHPCSRLCFCKCWTCFKEVDAEQYYSELEEQLTDEF 326

Query: 302 SG 303
           + 
Sbjct: 327 NA 328


>sp|Q3TWI9|TM63B_MOUSE Transmembrane protein 63B OS=Mus musculus GN=Tmem63b PE=1 SV=1
          Length = 832

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 24/253 (9%)

Query: 56  TLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACL 115
           T VS  V+ D R    F SW+ A  ++ + E+ D  G D+  YL      + + + +  L
Sbjct: 110 TSVSSSVDFDQRDN-GFCSWLTAIFRIKDDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVL 168

Query: 116 GFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKR 175
              +++PVN++   LE++   +      +I+N+  G+N  W H   A+++   T Y    
Sbjct: 169 SVGIVLPVNFSGDLLENNAYSFGRT---TIANLKSGNNLLWLHTSFAFLYLLLTVY---- 221

Query: 176 EYEIVAAMRLHFLASEHRRPD--QFTVLVRNVPPDPDESVTQLVEHFFLVNHPDHYLTHQ 233
                 +MR H     ++  D  + T+ +  +    +    ++ +HF         L  +
Sbjct: 222 ------SMRRHTSKMRYKEDDLVKRTLFINGISKYAESE--KIKKHFEEAYPNCTVLEAR 273

Query: 234 VVNNANKLSEL-VNKKKKMQNWLDFYQLKYSRN-PARKPSTKTGFLGLW----GKTVDAI 287
              N  +L  L   +KK  +  L F  L+   N PA       G L        + V+AI
Sbjct: 274 PCYNVARLMFLDAERKKAERGKLYFTNLQSKENVPAMINPKPCGHLCCCVVRGCEQVEAI 333

Query: 288 DFYTSKIETLKKE 300
           ++YT   + LK++
Sbjct: 334 EYYTKLEQRLKED 346


>sp|Q5T3F8|TM63B_HUMAN Transmembrane protein 63B OS=Homo sapiens GN=TMEM63B PE=1 SV=1
          Length = 832

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 56  TLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACL 115
           T VS  V+ D R    F SW+ A  ++ + E+ D  G D+  YL      + + + +  L
Sbjct: 110 TSVSSSVDFDQRDN-GFCSWLTAIFRIKDDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVL 168

Query: 116 GFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKR 175
              +++PVN++   LE++   +      +I+N+  G+N  W H   A+++   T Y ++R
Sbjct: 169 SVGIVLPVNFSGDLLENNAYSFGRT---TIANLKSGNNLLWLHTSFAFLYLLLTVYSMRR 225


>sp|Q03516|RSN1_YEAST Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=RSN1 PE=1 SV=1
          Length = 953

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 33/193 (17%)

Query: 21  FLSAFAILRIQPINDRVYFPKWYLKGL----RSSPLQTGTLVSKFVNLDFRSYLRFLSWM 76
           F+ AF ILRI+    R+Y PK     +    +  PL  G                   W+
Sbjct: 37  FVIAFLILRIKL--KRIYEPKSSFNLINEEKKPEPLPQGVW----------------QWL 78

Query: 77  PAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIA-CLGFAVMVPVNWTNKTLEHSKL 135
              L+  +  +I  AGLD   +LR YL  + I+  ++    F +++ +N +N   E    
Sbjct: 79  KPLLKKSDNFVIQQAGLDGYFFLR-YLFIIAIYCAVSMSYIFPILLSINASNGNHE---- 133

Query: 136 KYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEH--R 193
             S ++ L+  NV     R++ H+   ++F +   Y++ RE     +M+   LAS    +
Sbjct: 134 --SGLNQLAYQNVK-HRGRYFAHVFCGWIFFWGFLYIIYRELYFYTSMKQAVLASPRYAK 190

Query: 194 RPDQFTVLVRNVP 206
           +    TVL + VP
Sbjct: 191 KLSSRTVLFQTVP 203


>sp|Q06538|YL241_YEAST Uncharacterized membrane protein YLR241W OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=YLR241W PE=1
           SV=1
          Length = 782

 Score = 42.7 bits (99), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/287 (18%), Positives = 114/287 (39%), Gaps = 60/287 (20%)

Query: 74  SWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNW--TNKTLE 131
            W+    ++ + +++++AGLD+ V+L  + + +K+          V+ PV +  T K  +
Sbjct: 85  GWLTVLYKIRDEQILEYAGLDAYVFLSFFKMCIKLLSIFCFFSVCVISPVRYHFTGKIDD 144

Query: 132 HSKLKYSNIDLLSI-------------SNVPLGSNRF-WTHLVMAYVFTFWTCYVLKREY 177
            +    S   L+ +              + P  +N + W +++  Y FTF    +   E 
Sbjct: 145 GNDDDDSESSLIHLVKRIVEGSGDGDNHSAPERTNVYLWMYVLFTYFFTFIAIKMAVAET 204

Query: 178 EIVAAMRLHFLASEHRRPDQFTVLVRNVPPD--PDESVTQLVEHFFL------------- 222
           + V + R  +L  ++   D+ T+ +  +P +    E++   +E   +             
Sbjct: 205 KHVVSTRQAYLGKQNTITDR-TIRLSGIPIELRDSEALKTRIEQLKIGTVSSITICREWG 263

Query: 223 -VNHPDHYLTHQVVNNANKLSELVNKKKKMQNWLDFYQL--------------------- 260
            +N   H     + N   K SE   + +  Q + + Y L                     
Sbjct: 264 PLNKLFHCRKKILKNLELKYSECPRELRTRQPYSENYHLLGNEQSGAVTHGENVPSSNNN 323

Query: 261 -----KYSR-NPARKPSTKTGFLGLWGKTVDAIDFYTSKIETLKKEV 301
                 YS+ +   +P  K G+ G++GK VDAI++   +++ +  E+
Sbjct: 324 DEDTILYSQISLGERPKMKIGYRGIFGKEVDAIEYLEQQLKFIDAEI 370


>sp|Q12252|PHM7_YEAST Phosphate metabolism protein 7 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=PHM7 PE=1 SV=1
          Length = 991

 Score = 41.6 bits (96), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 23/163 (14%)

Query: 16  LSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSW 75
           L+A  F+  F +LR  P N RVY P+  LK +++ P +  T               +  W
Sbjct: 19  LTAVVFVWLFLLLR--PKNRRVYEPR-SLKDIQTIPEEERTEPVP---------EGYFGW 66

Query: 76  MPAALQMPEPELIDHAGLDSAVYLR-IYLIGLKIFIPIACLGFAVMVP-VNWTNKTLEHS 133
           +   L  P   LI H  +D    LR I ++G   F+   CL    ++  VN TN      
Sbjct: 67  VEYLLSKPHSFLIQHTSVDGYFLLRYIGIVGSLSFV--GCLLLLPILLPVNATNGN---- 120

Query: 134 KLKYSNIDLLSISNVPLGSNRFWTHLVMAYVFTFWTCYVLKRE 176
                  +LLS SNV    NRF+ H+ ++++F     YV+ +E
Sbjct: 121 --NLQGFELLSFSNV-TNKNRFYAHVFLSWIFFGLFTYVIYKE 160


>sp|Q27YG9|POLR_NORAV Replication polyprotein OS=Nora virus GN=ORF2 PE=4 SV=2
          Length = 2104

 Score = 32.0 bits (71), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 27   ILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVN 63
            ++R+QP  +   F K YL+ L++SP +TGT+ +K VN
Sbjct: 977  LIRLQPQREVENF-KVYLEDLQASPPKTGTICAKVVN 1012


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.138    0.427 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,741,343
Number of Sequences: 539616
Number of extensions: 4652782
Number of successful extensions: 12378
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12356
Number of HSP's gapped (non-prelim): 30
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)