BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021949
MASYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWN
FPIKFTFNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMK
FVTYQVRSSSGKPKGELHFSYKFSEPTVGKTHAKAGEPVTAYPAPMAAGSSSVPYAYPPP
PQAGYGYPPPPPQGAAPNGAYPPQQPGYGYPPPPPQQGYGYPPPPPQQGYGYPPPPPQQG
YGYPPQQPGYGYPPVKPAKKSNGGLGFGTGLLGGMLGGLLIGDIVSDAADYDGDFGGDFG
GDFDF

High Scoring Gene Products

Symbol, full name Information P value
AT3G16510 protein from Arabidopsis thaliana 1.1e-32
SRC2
AT1G09070
protein from Arabidopsis thaliana 1.6e-29
AT4G15755 protein from Arabidopsis thaliana 9.1e-29
AT3G62780 protein from Arabidopsis thaliana 6.3e-21
AT1G04540 protein from Arabidopsis thaliana 3.6e-08
AT3G55470 protein from Arabidopsis thaliana 4.8e-07
AT3G05440 protein from Arabidopsis thaliana 5.1e-06
AT4G01200 protein from Arabidopsis thaliana 1.0e-05
AT3G04360 protein from Arabidopsis thaliana 1.4e-05
AT2G13350 protein from Arabidopsis thaliana 1.4e-05
AT1G63220 protein from Arabidopsis thaliana 0.00020
AT1G07310 protein from Arabidopsis thaliana 0.00033

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021949
        (305 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2088334 - symbol:AT3G16510 "AT3G16510" species...   357  1.1e-32   1
TAIR|locus:2036004 - symbol:SRC2 "AT1G09070" species:3702...   327  1.6e-29   1
TAIR|locus:504955431 - symbol:AT4G15755 "AT4G15755" speci...   320  9.1e-29   1
TAIR|locus:2081745 - symbol:AT3G62780 "AT3G62780" species...   246  6.3e-21   1
TAIR|locus:2197868 - symbol:AT1G04540 "AT1G04540" species...   136  3.6e-08   1
TAIR|locus:2099946 - symbol:AT3G55470 "AT3G55470" species...   115  4.8e-07   1
TAIR|locus:2079762 - symbol:AT3G05440 "AT3G05440" species...   106  5.1e-06   1
TAIR|locus:2124933 - symbol:AT4G01200 "AT4G01200" species...   119  1.0e-05   1
TAIR|locus:2102980 - symbol:AT3G04360 "AT3G04360" species...   121  1.4e-05   1
TAIR|locus:2041654 - symbol:AT2G13350 "AT2G13350" species...   121  1.4e-05   1
TAIR|locus:2038461 - symbol:AT1G63220 "AT1G63220" species...   101  0.00020   1
TAIR|locus:2025002 - symbol:AT1G07310 "AT1G07310" species...   110  0.00033   1


>TAIR|locus:2088334 [details] [associations]
            symbol:AT3G16510 "AT3G16510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AP000373
            eggNOG:NOG246378 HOGENOM:HOG000238638 EMBL:BT011231 EMBL:BT012159
            IPI:IPI00528915 RefSeq:NP_188272.1 UniGene:At.38885
            ProteinModelPortal:Q9LK74 SMR:Q9LK74 EnsemblPlants:AT3G16510.1
            GeneID:820899 KEGG:ath:AT3G16510 TAIR:At3g16510 InParanoid:Q9LK74
            OMA:KADAYAP PhylomeDB:Q9LK74 ProtClustDB:CLSN2913353
            Genevestigator:Q9LK74 Uniprot:Q9LK74
        Length = 360

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 77/158 (48%), Positives = 105/158 (66%)

Query:     7 LDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT 66
             L+LN+ SAK L++V+LI+KMDVYAVV I+GD + K  K K+ +DR+G S PTWN  +KF+
Sbjct:     6 LELNVYSAKDLENVNLITKMDVYAVVWITGDDSRKNHKEKTPIDRTGESEPTWNHTVKFS 65

Query:    67 FNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXX-XXXGDAKSM-KFVTY 124
              +Q LA + RLTL  K+  D + GDK +GEV VP+ ELL         GD + M +FVTY
Sbjct:    66 VDQRLAHEGRLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQGMMRFVTY 125

Query:   125 QVRSSSGKPKGELHFSYKFSEPTVGKTHAKAGEPVTAY 162
             QVR+  GK +G L FSY+F  PT      K  +PV+++
Sbjct:   126 QVRTPFGKGQGSLTFSYRFDSPTF-----KPDQPVSSH 158


>TAIR|locus:2036004 [details] [associations]
            symbol:SRC2 "AT1G09070" species:3702 "Arabidopsis
            thaliana" [GO:0000326 "protein storage vacuole" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006623 "protein
            targeting to vacuole" evidence=RCA;TAS] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0006820 "anion transport"
            evidence=RCA] [GO:0006862 "nucleotide transport" evidence=RCA]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009612 "response to
            mechanical stimulus" evidence=RCA] [GO:0009646 "response to absence
            of light" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0015696 "ammonium transport"
            evidence=RCA] [GO:0015802 "basic amino acid transport"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
            [GO:0043269 "regulation of ion transport" evidence=RCA] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR000008
            InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 GO:GO:0005783
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            SUPFAM:SSF49562 EMBL:AC000106 GO:GO:0006623 UniGene:At.71449
            GO:GO:0000326 UniGene:At.24245 EMBL:AY045580 EMBL:AY142027
            IPI:IPI00527850 PIR:G86222 RefSeq:NP_563835.1 UniGene:At.31705
            UniGene:At.5402 UniGene:At.74046 ProteinModelPortal:O04023
            SMR:O04023 STRING:O04023 PaxDb:O04023 PRIDE:O04023
            EnsemblPlants:AT1G09070.1 GeneID:837428 KEGG:ath:AT1G09070
            TAIR:At1g09070 eggNOG:NOG246378 HOGENOM:HOG000238638
            InParanoid:O04023 OMA:QGPYGYP PhylomeDB:O04023
            ProtClustDB:CLSN2916988 Genevestigator:O04023 Uniprot:O04023
        Length = 324

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 86/181 (47%), Positives = 107/181 (59%)

Query:     5 RALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIK 64
             R+LDL +ISA+ LKDV LI K D+YAVVSI+GD   K QK K  VD+  G+ P W   +K
Sbjct:     4 RSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDARTK-QKTK--VDKDCGTKPKWKHQMK 60

Query:    65 FTFNQSLAQQNRLTLDFKIKSDG-LLGDKTVGEVIVPIKELLDXXXXXXXGDAKSMKFVT 123
              T + + A+ NRLTL F+I +D  + GDK VGEV VP+KELLD       GD +  K VT
Sbjct:    61 LTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNK----GDEE--KTVT 114

Query:   124 YQVRSSSGKPKGELHFSYKFSEP-TVGKT------------HAKAGEPVTAYPAPMAAGS 170
             Y VR  +GK KG L FS+KF E  T G +            H    +PVTAYP    A S
Sbjct:   115 YAVRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPVPSAMDHKTMDQPVTAYPPGHGAPS 174

Query:   171 S 171
             +
Sbjct:   175 A 175


>TAIR|locus:504955431 [details] [associations]
            symbol:AT4G15755 "AT4G15755" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002687 InterPro:IPR018029 SUPFAM:SSF49562
            PROSITE:PS50004 IPI:IPI00525421 RefSeq:NP_680701.1 UniGene:At.65385
            ProteinModelPortal:F4JK83 EnsemblPlants:AT4G15755.1 GeneID:827254
            KEGG:ath:AT4G15755 OMA:GHANNYA Uniprot:F4JK83
        Length = 289

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 66/144 (45%), Positives = 99/144 (68%)

Query:     7 LDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT 66
             L+LN+ SA++L +V+LI+KM+V+  ++I+G++T KKQK K+ VDR GGSNPTWN  IKF+
Sbjct:     6 LELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQTIKFS 65

Query:    67 FNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXXXXXGDAKS--MKFVTY 124
              ++  A+    +L  ++ S  +LG+K +G V +P+ ELL+       GD     MK ++Y
Sbjct:    66 VDERSARGGHSSLVMRVISRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDHEMKLMSY 125

Query:   125 QVRSSSGKPKGELHFSYKFSEPTV 148
             QVR+SSGK  G L FSY+F +P V
Sbjct:   126 QVRTSSGKRSGSLSFSYRF-KPNV 148


>TAIR|locus:2081745 [details] [associations]
            symbol:AT3G62780 "AT3G62780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 EMBL:AL162651 InterPro:IPR018029
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:BT011570 EMBL:BT012259
            IPI:IPI00548367 PIR:T48067 RefSeq:NP_191837.1 UniGene:At.34055
            ProteinModelPortal:Q9LZI7 SMR:Q9LZI7 PRIDE:Q9LZI7
            EnsemblPlants:AT3G62780.1 GeneID:825453 KEGG:ath:AT3G62780
            TAIR:At3g62780 InParanoid:Q9LZI7 OMA:NGPVLSQ PhylomeDB:Q9LZI7
            ProtClustDB:CLSN2913438 Genevestigator:Q9LZI7 Uniprot:Q9LZI7
        Length = 298

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 60/145 (41%), Positives = 86/145 (59%)

Query:     5 RALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKV-KSHVDRSGGSNPTW-NFP 62
             R+L++N+ SAK LK V   SKMDV+  V +SGD      +  ++   R GG++P W N  
Sbjct:     4 RSLEINVTSAKGLKKV---SKMDVFVAVKLSGDPKCSDHREQRTQAARDGGTSPKWSNDV 60

Query:    63 IKFTFNQSLAQQNRLTLDFKIKSDGLLG-DKTVGEVIVPIKELLDXXXXXXXGDAKSMKF 121
             +KF  +Q+LA+ NRL + FKIK +   G DK +GEV V +KELLD        D    ++
Sbjct:    61 MKFILDQNLAEANRLVITFKIKCEQRGGVDKDIGEVHVQVKELLDHLG----NDKTGQRY 116

Query:   122 VTYQVRSSSGKPKGELHFSYKFSEP 146
             VTYQ+    GK K ++ F+Y F+ P
Sbjct:   117 VTYQI----GKSKADISFTYSFTGP 137


>TAIR|locus:2197868 [details] [associations]
            symbol:AT1G04540 "AT1G04540" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0016020
            "membrane" evidence=IDA] InterPro:IPR000008 InterPro:IPR008973
            Pfam:PF00168 SMART:SM00239 EMBL:CP002684 GO:GO:0016020
            SUPFAM:SSF49562 IPI:IPI00546706 RefSeq:NP_171948.1 UniGene:At.42444
            ProteinModelPortal:F4I5P7 SMR:F4I5P7 EnsemblPlants:AT1G04540.1
            GeneID:839498 KEGG:ath:AT1G04540 OMA:TPMRSNI ArrayExpress:F4I5P7
            Uniprot:F4I5P7
        Length = 601

 Score = 136 (52.9 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 45/145 (31%), Positives = 71/145 (48%)

Query:     3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFP 62
             S++ L+LN+ISA+ L  V    K   YAV  +   H+  ++K+ + VD +GG+NPTWN  
Sbjct:     7 SFQLLELNIISAQDLAPV--ARKTKTYAVAWV---HS--ERKLTTRVDYNGGTNPTWNDK 59

Query:    63 IKFTFNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXXXXXGDAKS---- 118
               F  N+     +   +  +I +     D  VG V V I  L+          + +    
Sbjct:    60 FVFRVNEEFLYADTSAVVIEIYALHWFRDVHVGTVRVLISNLIPPNRRPGYRTSNNEYRR 119

Query:   119 -----MKFVTYQVRSSSGKPKGELH 138
                  M+FV  QVR +SG+P+G L+
Sbjct:   120 TPPPGMRFVALQVRRTSGRPQGILN 144


>TAIR|locus:2099946 [details] [associations]
            symbol:AT3G55470 "AT3G55470" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009963 "positive regulation of
            flavonoid biosynthetic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR018029
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL132975 HOGENOM:HOG000005983
            UniGene:At.26631 UniGene:At.35023 EMBL:BT025730 EMBL:AK117139
            IPI:IPI00530875 PIR:T47686 RefSeq:NP_191107.1
            ProteinModelPortal:Q9M2T2 SMR:Q9M2T2 STRING:Q9M2T2 PRIDE:Q9M2T2
            EnsemblPlants:AT3G55470.1 GeneID:824713 KEGG:ath:AT3G55470
            TAIR:At3g55470 InParanoid:Q9M2T2 OMA:NEVFKFQ PhylomeDB:Q9M2T2
            ProtClustDB:CLSN2685296 Genevestigator:Q9M2T2 Uniprot:Q9M2T2
        Length = 156

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 42/141 (29%), Positives = 59/141 (41%)

Query:     7 LDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT 66
             L+++LIS K LK    + K+D Y  +   G  T K    K      GG NPTWN  +K+ 
Sbjct:     6 LEVSLISGKGLKRSDFLGKIDPYVEIQYKGQ-TRKSSVAKE----DGGRNPTWNDKLKWR 60

Query:    67 --FNQSLAQQNRLTLDFKIKS-DGLLGDKTVGEVIVPIKELLDXXXXXXXGDAKSMKFVT 123
               F  S A    +    K+   D    D  +GE  V +KELL+        + +  K   
Sbjct:    61 AEFPGSGADYKLIV---KVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTK--- 114

Query:   124 YQVRSSSGKPKGELHFSYKFS 144
             Y +  S     GEL     +S
Sbjct:   115 YNIVDSDLSFVGELLIGVSYS 135


>TAIR|locus:2079762 [details] [associations]
            symbol:AT3G05440 "AT3G05440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF49562 EMBL:AC009606 IPI:IPI00521198 RefSeq:NP_187195.1
            UniGene:At.53188 ProteinModelPortal:Q9MA57
            EnsemblPlants:AT3G05440.1 GeneID:819709 KEGG:ath:AT3G05440
            TAIR:At3g05440 eggNOG:NOG241532 HOGENOM:HOG000153258 OMA:HEPSAPC
            PhylomeDB:Q9MA57 ProtClustDB:CLSN2914798 Genevestigator:Q9MA57
            Uniprot:Q9MA57
        Length = 122

 Score = 106 (42.4 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 26/101 (25%), Positives = 51/101 (50%)

Query:     1 MASYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWN 60
             M  Y+ +++N++SA+ L  ++L+ +  VY  VS++     K+    +  D+       WN
Sbjct:     1 MEYYQPVEINVLSAQDLNSINLLFRPTVYVSVSVTRGSRDKQVTPAAAWDKKF---LRWN 57

Query:    61 FPIKFTFNQSLAQQNRLTLDFKIKSDGLLG-DKTVGEVIVP 100
             + +KF       ++N     F+IK     G D+ VG++ +P
Sbjct:    58 YRMKFYIEDDKVRRNESVFVFQIKCKRFFGSDQVVGKLFIP 98


>TAIR|locus:2124933 [details] [associations]
            symbol:AT4G01200 "AT4G01200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002687 GenomeReviews:CT486007_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL161491
            EMBL:AY080883 EMBL:AY114050 IPI:IPI00528057 PIR:G85015
            RefSeq:NP_192029.1 UniGene:At.34467 ProteinModelPortal:Q9M148
            SMR:Q9M148 EnsemblPlants:AT4G01200.1 GeneID:828043
            KEGG:ath:AT4G01200 TAIR:At4g01200 eggNOG:NOG299143
            HOGENOM:HOG000153213 InParanoid:Q9M148 OMA:GSENPIW PhylomeDB:Q9M148
            ProtClustDB:CLSN2685478 Genevestigator:Q9M148 Uniprot:Q9M148
        Length = 250

 Score = 119 (46.9 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 37/141 (26%), Positives = 59/141 (41%)

Query:     1 MASYRALDLNLISAKHLKD-VHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTW 59
             M   + L++NLISA+ LK+    + ++  YA V +         K+++ +DR G  NP W
Sbjct:     1 MEETQVLEINLISAQGLKEPTGKLRRLQTYASVWVDSS-----SKLRTRIDRIGSENPIW 55

Query:    60 NFPIKFTFNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXXXXXGDAKSM 119
             N    F  +          +  +I + G L D  +G V   +   L           K  
Sbjct:    56 NDKFVFQVSPEFLSSETSGVSIEIYAVGYLRDHLIGTVRFLVSNFLPTAA------VKVP 109

Query:   120 KFVTYQVRSSSGKPKGELHFS 140
               V  Q+R  SGK  G L+ +
Sbjct:   110 SLVALQIRRPSGKFHGVLNIA 130


>TAIR|locus:2102980 [details] [associations]
            symbol:AT3G04360 "AT3G04360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000008
            InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 EMBL:CP002686
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 IPI:IPI00521914
            RefSeq:NP_566225.4 UniGene:At.40850 ProteinModelPortal:F4J3N4
            PRIDE:F4J3N4 EnsemblPlants:AT3G04360.1 GeneID:819591
            KEGG:ath:AT3G04360 OMA:CEISITC Uniprot:F4J3N4
        Length = 391

 Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 40/136 (29%), Positives = 63/136 (46%)

Query:     7 LDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT 66
             L++NLISA+ L  V     M  Y+V  I+ D     +K+ + VD+S  +NP WN    F 
Sbjct:    11 LEINLISAQDLAPVS--RNMKTYSVAWINTD---PMRKLTTRVDQSNRANPIWNEKFVFR 65

Query:    67 FNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXXXXXGDA-----KSMKF 121
              N  +   +   +  +I +     D  VG V V + +L         G+       +M+ 
Sbjct:    66 VNDKILYVDASAIVIEIYAAAWAKDALVGTVNVLLSDLFAPWSGFGDGNDGGGGNNNMRL 125

Query:   122 VTYQVRSSSGKPKGEL 137
             VT Q+R  SG+ +G L
Sbjct:   126 VTLQIRRPSGRLQGFL 141


>TAIR|locus:2041654 [details] [associations]
            symbol:AT2G13350 "AT2G13350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006944 "cellular membrane
            fusion" evidence=RCA] InterPro:IPR000008 InterPro:IPR008973
            Pfam:PF00168 SMART:SM00239 EMBL:CP002685 SUPFAM:SSF49562
            EMBL:AC007209 EMBL:AC006446 EMBL:BT005348 EMBL:AK118570
            IPI:IPI00536425 PIR:A84507 RefSeq:NP_178968.1 UniGene:At.40669
            ProteinModelPortal:Q9SI42 SMR:Q9SI42 STRING:Q9SI42
            EnsemblPlants:AT2G13350.1 GeneID:815821 KEGG:ath:AT2G13350
            TAIR:At2g13350 HOGENOM:HOG000114072 InParanoid:Q9SI42 OMA:NICGIEC
            PhylomeDB:Q9SI42 ProtClustDB:CLSN2912990 ArrayExpress:Q9SI42
            Genevestigator:Q9SI42 Uniprot:Q9SI42
        Length = 401

 Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 40/140 (28%), Positives = 68/140 (48%)

Query:     1 MASYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWN 60
             +A  + L+LN+ISA+ L  V    K   YA+  I  +     +K+ + VD +GG++PTWN
Sbjct:     4 LAPCQILELNIISAQELAPVARCMK--TYAIAWIDPE-----RKLTTRVDNTGGTSPTWN 56

Query:    61 FPIKFTFNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXXXXXGDAKSMK 120
                 F  ++         +  +I +     D  VG V   I +L+          + +M+
Sbjct:    57 DKFVFRLDEEALYDATSIVVIEIYALHWFKDIHVGTVQALISDLVS--------PSSAMR 108

Query:   121 FVTYQVRSSSGKPKGELHFS 140
             FVT +V  +SG+P G L+ +
Sbjct:   109 FVTLEVLRASGRPHGLLNIA 128


>TAIR|locus:2038461 [details] [associations]
            symbol:AT1G63220 "AT1G63220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC022355
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AY054623
            EMBL:AY081504 EMBL:AY085843 IPI:IPI00525156 PIR:H96657
            RefSeq:NP_176511.1 UniGene:At.24672 PDB:1WFJ PDBsum:1WFJ
            ProteinModelPortal:Q9C8S6 SMR:Q9C8S6 PaxDb:Q9C8S6 PRIDE:Q9C8S6
            EnsemblPlants:AT1G63220.1 GeneID:842627 KEGG:ath:AT1G63220
            TAIR:At1g63220 eggNOG:NOG289233 HOGENOM:HOG000005983
            InParanoid:Q9C8S6 OMA:GLENTDF PhylomeDB:Q9C8S6
            ProtClustDB:CLSN2682388 EvolutionaryTrace:Q9C8S6
            Genevestigator:Q9C8S6 GermOnline:AT1G63220 Uniprot:Q9C8S6
        Length = 147

 Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
 Identities = 27/96 (28%), Positives = 46/96 (47%)

Query:     7 LDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT 66
             L++ L+SAK L+D   ++ MD Y  +      T + Q  KS+V    G+ P WN    FT
Sbjct:     6 LEVVLVSAKGLEDADFLNNMDPYVQL------TCRTQDQKSNVAEGMGTTPEWNETFIFT 59

Query:    67 FNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIK 102
              ++   +      D  + ++    D  VGE  +P++
Sbjct:    60 VSEGTTELKAKIFDKDVGTE----DDAVGEATIPLE 91


>TAIR|locus:2025002 [details] [associations]
            symbol:AT1G07310 "AT1G07310" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 HSSP:P05696
            EMBL:AC022464 UniGene:At.32199 EMBL:AY054646 EMBL:AY081489
            IPI:IPI00524174 RefSeq:NP_563785.1 UniGene:At.23050
            ProteinModelPortal:Q9LNV0 SMR:Q9LNV0 IntAct:Q9LNV0 PaxDb:Q9LNV0
            PRIDE:Q9LNV0 EnsemblPlants:AT1G07310.1 GeneID:837242
            KEGG:ath:AT1G07310 TAIR:At1g07310 eggNOG:NOG262238
            HOGENOM:HOG000238477 InParanoid:Q9LNV0 OMA:VWNERIT PhylomeDB:Q9LNV0
            ProtClustDB:CLSN2916980 ArrayExpress:Q9LNV0 Genevestigator:Q9LNV0
            Uniprot:Q9LNV0
        Length = 352

 Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00033
 Identities = 43/172 (25%), Positives = 71/172 (41%)

Query:     1 MASYRALDL--NLISAKHLKDVHLIS-KMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNP 57
             M S   LDL   ++SAKHLK+V+  +  +  Y V+ +  DH +  +      D S    P
Sbjct:     1 MTSSEPLDLVVTVVSAKHLKNVNWRNGDLKPYVVLYLDQDHPLSTRS-----DDSSSIKP 55

Query:    58 TWNFPIKFTFNQSLAQQNRLTLDFKIKSDGLLGDKTVGEVIVPIKELLDXXXXXXXGDAK 117
              WN  I     +S+  ++ L ++    +   L    VG V  P+  L+D           
Sbjct:    56 VWNERITLPLTRSV-HESVLNIEVFHSNSSDLAKTLVGSVRFPLARLIDSDGSMIPELIN 114

Query:   118 SMKFVTYQVRSSSGKPKGELHFSYKFSE-PTVGKTHAKA---GEPVTAYPAP 165
             S++ V       SG+P+G++       + P     H       +P+  Y AP
Sbjct:   115 SLELVR-----PSGRPQGKIRLKLAIKDRPIPPPQHPPPRPQSQPLDYYSAP 161


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.129   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      305       183   0.00076  110 3  11 23  0.49    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  12
  No. of states in DFA:  560 (60 KB)
  Total size of DFA:  135 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.62u 0.11s 15.73t   Elapsed:  00:00:01
  Total cpu time:  15.62u 0.11s 15.73t   Elapsed:  00:00:01
  Start:  Tue May 21 00:35:05 2013   End:  Tue May 21 00:35:06 2013

Back to top