Query 021949
Match_columns 305
No_of_seqs 368 out of 1800
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:44:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 1.1E-22 3.8E-27 164.9 13.2 125 3-148 8-133 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.9 1.2E-21 3.9E-26 159.7 16.5 127 2-147 4-135 (140)
3 3b7y_A E3 ubiquitin-protein li 99.9 8.6E-22 2.9E-26 162.9 15.9 133 3-145 18-153 (153)
4 3m7f_B E3 ubiquitin-protein li 99.9 1.3E-21 4.5E-26 165.9 16.1 134 3-146 6-142 (176)
5 2ep6_A MCTP2 protein; beta san 99.9 1.3E-21 4.4E-26 158.2 12.2 119 2-144 10-131 (133)
6 2fk9_A Protein kinase C, ETA t 99.9 4E-21 1.4E-25 160.4 12.2 119 3-144 27-156 (157)
7 3kwu_A MUNC13-1; calcium bindi 99.8 4.1E-20 1.4E-24 151.9 16.8 119 3-145 15-147 (148)
8 1gmi_A Protein kinase C, epsil 99.8 9.7E-21 3.3E-25 153.8 12.3 119 3-146 4-134 (136)
9 3pyc_A E3 ubiquitin-protein li 99.8 2.5E-20 8.7E-25 150.4 14.1 122 3-144 3-132 (132)
10 1rlw_A Phospholipase A2, CALB 99.8 1.8E-20 6.2E-25 149.7 12.1 118 4-142 2-122 (126)
11 2nq3_A Itchy homolog E3 ubiqui 99.8 5.3E-20 1.8E-24 156.0 13.9 126 3-146 34-162 (173)
12 2cjt_A UNC-13 homolog A, MUNC1 99.8 1.2E-19 4E-24 147.0 11.4 121 2-144 2-131 (131)
13 2b3r_A Phosphatidylinositol-4- 99.8 1.3E-18 4.3E-23 141.1 14.6 110 4-128 19-130 (134)
14 1a25_A CALB, protein kinase C 99.8 1.4E-18 4.9E-23 143.0 14.6 109 4-128 30-139 (149)
15 3f04_A Synaptotagmin-1; C2A, c 99.8 8.5E-19 2.9E-23 143.2 13.0 110 3-128 32-142 (143)
16 1rsy_A Synaptotagmin I; calciu 99.8 1.5E-18 5E-23 143.5 14.3 110 3-128 40-150 (152)
17 2z0u_A WW domain-containing pr 99.8 3.7E-19 1.3E-23 148.2 10.6 113 3-127 41-154 (155)
18 2d8k_A Synaptotagmin VII; exoc 99.8 1.4E-18 4.7E-23 141.7 13.7 111 3-129 24-136 (141)
19 1v27_A Regulating synaptic mem 99.8 1.1E-18 3.6E-23 142.0 11.8 116 4-134 20-140 (141)
20 3rdl_A Protein kinase C alpha 99.8 2.8E-18 9.7E-23 138.7 14.1 109 4-128 15-124 (137)
21 3fbk_A RGS3, RGP3, regulator o 99.8 1.1E-18 3.7E-23 144.5 11.8 122 3-139 25-148 (153)
22 3fdw_A Synaptotagmin-like prot 99.8 1.5E-18 5E-23 142.8 12.5 114 3-130 21-136 (148)
23 1ugk_A Synaptotagmin IV, KIAA1 99.8 4.8E-18 1.6E-22 138.0 15.1 111 3-128 20-133 (138)
24 2dmg_A KIAA1228 protein; beta- 99.8 1.6E-18 5.5E-23 141.4 11.9 117 3-134 22-141 (142)
25 2bwq_A Regulating synaptic mem 99.8 3.9E-18 1.3E-22 136.6 13.8 109 3-126 16-128 (129)
26 2chd_A Rabphilin-3A, exophilin 99.8 4.2E-18 1.4E-22 138.9 13.8 112 3-128 27-140 (142)
27 2r83_A Synaptotagmin-1; C2A-C2 99.8 1.3E-17 4.4E-22 151.1 17.8 128 3-146 17-148 (284)
28 2cjs_A UNC-13 homolog A, MUNC1 99.8 6E-18 2E-22 142.6 13.8 124 3-147 12-143 (167)
29 2enp_A B/K protein; C2 type 1, 99.8 3.4E-18 1.1E-22 140.4 11.9 98 3-106 24-129 (147)
30 1rh8_A Piccolo protein; beta-s 99.7 1.3E-18 4.4E-23 141.8 7.3 113 4-129 17-139 (142)
31 2q3x_A Regulating synaptic mem 99.7 6E-18 2.1E-22 142.8 11.7 110 4-130 29-141 (171)
32 1wfm_A Synaptotagmin XIII; C2 99.7 1.2E-17 4E-22 136.0 12.8 109 3-129 24-133 (138)
33 3n5a_A Synaptotagmin-7; calciu 99.7 2E-17 7E-22 133.7 13.4 99 3-105 14-113 (138)
34 2cm5_A Rabphilin-3A; protein t 99.7 4.2E-17 1.4E-21 136.7 15.5 99 3-105 35-134 (166)
35 1tjx_A Similar to synaptotagmi 99.7 2.9E-17 1E-21 136.5 14.4 97 3-103 23-120 (159)
36 1w15_A Synaptotagmin IV; metal 99.7 2.4E-17 8.2E-22 136.1 12.6 97 3-103 28-125 (153)
37 3l9b_A Otoferlin; C2-domain, b 99.7 8.3E-17 2.8E-21 130.5 12.7 119 6-147 22-142 (144)
38 1dqv_A Synaptotagmin III; beta 99.7 2.2E-16 7.5E-21 144.3 15.0 129 3-146 18-150 (296)
39 1djx_A PLC-D1, phosphoinositid 99.7 5.5E-16 1.9E-20 155.2 17.5 124 4-145 496-624 (624)
40 3jzy_A Intersectin 2; C2 domai 99.7 5.1E-16 1.8E-20 151.7 14.4 122 3-144 385-507 (510)
41 3nsj_A Perforin-1; pore formin 99.6 1.2E-15 4.1E-20 150.1 14.4 111 4-145 393-504 (540)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.7E-14 5.8E-19 130.5 14.1 97 4-104 149-246 (284)
43 1cjy_A CPLA2, protein (cytosol 99.5 1.4E-14 4.8E-19 146.8 10.1 108 3-128 16-126 (749)
44 1dqv_A Synaptotagmin III; beta 99.5 1E-14 3.5E-19 133.2 6.0 98 4-105 151-249 (296)
45 3ohm_B 1-phosphatidylinositol- 99.5 1.6E-13 5.5E-18 141.2 15.1 119 5-147 725-847 (885)
46 2zkm_X 1-phosphatidylinositol- 99.5 3E-13 1E-17 138.7 16.3 117 4-144 677-798 (799)
47 3bxj_A RAS GTPase-activating p 99.5 2.5E-15 8.5E-20 146.5 0.1 118 4-147 10-159 (483)
48 3qr0_A Phospholipase C-beta (P 99.5 6.3E-13 2.2E-17 136.0 16.1 120 5-148 650-774 (816)
49 3pfq_A PKC-B, PKC-beta, protei 99.4 7.4E-13 2.5E-17 133.9 12.2 110 4-129 171-281 (674)
50 1yrk_A NPKC-delta, protein kin 99.1 3.1E-09 1.1E-13 83.8 13.7 119 5-144 6-124 (126)
51 2enj_A NPKC-theta, protein kin 99.0 4.8E-09 1.6E-13 83.8 13.4 120 5-146 10-131 (138)
52 2yrb_A Protein fantom; beta sa 97.0 0.0049 1.7E-07 50.3 10.2 130 5-148 18-153 (156)
53 3l4c_A Dedicator of cytokinesi 96.4 0.045 1.5E-06 47.1 12.3 96 4-103 26-139 (220)
54 1dx0_A Prion protein; brain, r 95.9 0.00017 5.9E-09 61.0 -5.4 25 263-287 101-125 (219)
55 1dx0_A Prion protein; brain, r 95.8 0.00035 1.2E-08 59.2 -3.8 30 261-290 95-124 (219)
56 3hhm_A Phosphatidylinositol-4, 94.3 0.33 1.1E-05 51.0 12.2 98 4-105 354-456 (1091)
57 2wxf_A Phosphatidylinositol-4, 94.3 0.22 7.6E-06 51.7 10.8 96 4-104 216-324 (940)
58 2y3a_A Phosphatidylinositol-4, 89.7 0.31 1.1E-05 51.4 5.2 79 4-87 352-430 (1092)
59 1e7u_A Phosphatidylinositol 3- 88.9 1.4 4.6E-05 46.0 9.2 79 4-86 217-295 (961)
60 2qzq_A Axin interactor, dorsal 86.0 2.2 7.4E-05 34.4 6.9 96 7-106 16-115 (152)
61 2lbg_A Major prion protein; co 75.6 1.9 6.5E-05 23.9 2.1 20 267-286 7-26 (27)
62 3heq_A Major prion protein; ce 25.8 10 0.00035 29.4 -0.8 19 267-285 27-45 (142)
63 1tpx_A Prion protein, major pr 25.4 3.7 0.00013 31.6 -3.4 19 267-285 6-24 (121)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.89 E-value=1.1e-22 Score=164.89 Aligned_cols=125 Identities=28% Similarity=0.443 Sum_probs=107.4
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..++|+|+|++|++|+..+.++++||||+|++.+ .+++|+++++++.||+|||+|.|.+... ...|+|+
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~~~~nP~Wne~f~f~v~~~-----~~~l~~~ 76 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT------QDQKSNVAEGMGTTPEWNETFIFTVSEG-----TTELKAK 76 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS------CEEECCCCTTCCSSCEEEEEEEEEEESS-----CCEEEEE
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC------ccceeEeccCCCCCCccCcEEEEEECCC-----CCEEEEE
Confidence 5688999999999999999889999999999976 4789999984589999999999999762 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEeccCC
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFSEPTV 148 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~~~~~ 148 (305)
|||++.+ +|++||++.|+|.++.... +....||.|. ++++..|+|+|+|+|.+...
T Consensus 77 V~d~~~~~~d~~lG~~~i~l~~l~~~~---------~~~~~w~~L~-~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 77 IFDKDVGTEDDAVGEATIPLEPVFVEG---------SIPPTAYNVV-KDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp ECCSSSCTTTCCSEEEEEESHHHHHHS---------EEEEEEEEEE-ETTEEEEEEEEEEEEEECCS
T ss_pred EEECCCCCCCceEEEEEEEHHHhccCC---------CCCcEEEEee-cCCccCEEEEEEEEEEeCCC
Confidence 9999988 7999999999999996433 2356789988 56778999999999998743
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=159.67 Aligned_cols=127 Identities=19% Similarity=0.300 Sum_probs=104.5
Q ss_pred CccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEE
Q 021949 2 ASYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDF 81 (305)
Q Consensus 2 ~~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v 81 (305)
+..++|+|+|++|++|...+. +++||||++++.+ .++||+++++ +.||+|||+|.|.+...... ....|+|
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~------~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~-~~~~l~i 74 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD------EKKKTKKVDN-ELNPVWNEILEFDLRGIPLD-FSSSLGI 74 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS------CEEECCCCCS-CSSCEEEEEEEEECSSCCCC-TTCEEEE
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC------EeEEeeeecC-CCCCccCcEEEEEecccccC-CCCEEEE
Confidence 356899999999999999888 9999999999986 5799999887 79999999999999754321 2368999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEE---eecCCC-CCccEEEEEEEEeccC
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQ---VRSSSG-KPKGELHFSYKFSEPT 147 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~---l~~~~g-~~~G~l~lsl~~~~~~ 147 (305)
+|||++.+ .|++||++.|+|.+|.... ....|+. |.+.++ +.+|+|+|+|+|.+..
T Consensus 75 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~----------~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 75 IVKDFETIGQNKLIGTATVALKDLTGDQ----------SRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp EEEETTCSSSCCCCEEEEEEGGGTCSSS----------CEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred EEEECCCCCCCceEEEEEEEHHHhccCC----------CceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 99999988 7899999999999997533 2355665 666444 4679999999998854
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.88 E-value=8.6e-22 Score=162.92 Aligned_cols=133 Identities=20% Similarity=0.314 Sum_probs=100.4
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|+..+.++++||||++++......+..+++|+++++ +.||+|||+|.|.+.... ..|+|+
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~-----~~l~~~ 91 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKK-SLNPKWNEEILFRVHPQQ-----HRLLFE 91 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCCCCEEEEEEECTTT-----CEEEEE
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccC-CCCCCCCCEEEEEecCCC-----CEEEEE
Confidence 45789999999999999888899999999999853321236889999988 899999999999997542 589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC--CCCCccEEEEEEEEec
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS--SGKPKGELHFSYKFSE 145 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~--~g~~~G~l~lsl~~~~ 145 (305)
|||++.+ +|++||++.|+|.+|.... ......+...||.|... ..+.+|+|+|+++|.+
T Consensus 92 V~d~d~~~~d~~iG~~~i~l~~l~~~~----~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 92 VFDENRLTRDDFLGQVDVPLYPLPTEN----PRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp EEECCSSSCCEEEEEEEEECCSCCBCC----TTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred EEECCCCcCCCeeEEEEEEHHHcccCC----CcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9999988 7999999999999998643 11101233578888753 3467899999999964
No 4
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.87 E-value=1.3e-21 Score=165.89 Aligned_cols=134 Identities=19% Similarity=0.302 Sum_probs=101.5
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
+.++|+|+|++|++|+..+.++++||||+|++.........+++|+++++ +.||+|||+|.|.+.... ..|+|+
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~-t~nP~Wne~f~f~v~~~~-----~~L~~~ 79 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLPQR-----HRILFE 79 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSS-CSSCEEEEEEEEEECTTT-----CEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECC-CCCCcccceEEEEEcCCC-----CEEEEE
Confidence 56899999999999999998899999999999864322225789999987 899999999999997542 589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec--CCCCCccEEEEEEEEecc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS--SSGKPKGELHFSYKFSEP 146 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~--~~g~~~G~l~lsl~~~~~ 146 (305)
|||++.+ .|+|||++.|+|.+|.... ......+...||.|.. ..++.+|+|+|+|+|.+.
T Consensus 80 V~d~d~~~~d~~lG~~~i~l~~l~~~~----~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 80 VFDENRLTRDDFLGQVDVPLYPLPTEN----PRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp EEECC----CEEEEEEEEESCSCCBC----------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred EEECCCCCCCcEEEEEEEEHHHccccC----CcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 9999988 7899999999999998643 1100012236888875 345678999999999987
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=1.3e-21 Score=158.23 Aligned_cols=119 Identities=16% Similarity=0.304 Sum_probs=102.3
Q ss_pred CccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEE
Q 021949 2 ASYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDF 81 (305)
Q Consensus 2 ~~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v 81 (305)
...++|+|+|++|++|+..+.++++||||++++.+ .+++|+++++ +.||+|||+|.|.+.... ..|+|
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~-t~nP~wne~f~f~~~~~~-----~~l~i 77 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN------DRLQTHTVYK-NLNPEWNKVFTFPIKDIH-----DVLEV 77 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT------EEEECCCCSS-CSSCCCCEEEEEEESCTT-----CEEEE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC------EEEEeeeecC-CCCCccccEEEEEecCCC-----CEEEE
Confidence 35689999999999999999889999999999976 5789999988 899999999999997532 58999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCC--CCCccEEEEEEEEe
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSS--GKPKGELHFSYKFS 144 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~--g~~~G~l~lsl~~~ 144 (305)
+|||++.+ +|++||++.|+|.++.. . ...||.|...+ ++.+|+|+|+++|.
T Consensus 78 ~V~d~d~~~~~~~lG~~~i~l~~l~~-~-----------~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 78 TVFDEDGDKPPDFLGKVAIPLLSIRD-G-----------QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEEEETTEEEEECCBCEEEGGGCCS-S-----------CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EEEECCCCCCCCeeEEEEEEHHHccC-C-----------CceEEEeecCCCCCccceEEEEEEEEE
Confidence 99999988 78999999999999863 2 13688887643 46889999999985
No 6
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=4e-21 Score=160.38 Aligned_cols=119 Identities=15% Similarity=0.167 Sum_probs=97.1
Q ss_pred ccceEEEEEEEecCCCCCCC----------CCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchh
Q 021949 3 SYRALDLNLISAKHLKDVHL----------ISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLA 72 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~----------~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~ 72 (305)
..+.|+|+|++|++|+..+. .+.+||||+|++++ .++.||+++++ +.||+|||+|.|.+...
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-----~~~~kT~v~~k-tlnP~WNE~F~f~v~~~-- 98 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-----VRVGQTSTKQK-TNKPTYNEEFCANVTDG-- 98 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-----EEEEECCCCSS-CSSCEEEEEEEEEEEEE--
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-----EeeEEeeecCC-CCCCccCcEEEEEcCCC--
Confidence 46899999999999997762 25689999999975 24579999877 89999999999998642
Q ss_pred ccCceEEEEEEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEe
Q 021949 73 QQNRLTLDFKIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFS 144 (305)
Q Consensus 73 ~~~~~~L~v~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~ 144 (305)
..|.|+|||++.+ .|++||++.|+|.+|.... . + ......||.|.. +|+|+|+++|.
T Consensus 99 ----~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~----~-~-~~~~~~W~~L~~-----~G~i~l~l~~~ 156 (157)
T 2fk9_A 99 ----GHLELAVFHETPLGYDHFVANCTLQFQELLRTT----G-A-SDTFEGWVDLEP-----EGKVFVVITLT 156 (157)
T ss_dssp ----CEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHH----T-T-CSEEEEEEECBS-----SCEEEEEEEEC
T ss_pred ----CEEEEEEEECCCCCCCCEEEEEEEEHHHhhccc----C-C-CCcccEEEECCC-----CcEEEEEEEEE
Confidence 4899999999988 6899999999999998641 0 0 013578999853 89999999984
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.85 E-value=4.1e-20 Score=151.93 Aligned_cols=119 Identities=15% Similarity=0.262 Sum_probs=100.8
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||++++.. .+++|+++++ +.||.|||+|.|.+.... ..|.|+
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~-t~nP~Wne~f~f~v~~~~-----~~l~~~ 82 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK------TKKRTKTIYG-NLNPVWEENFHFECHNSS-----DRIKVR 82 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCCS-CSSCEEEEEEEEEECSTT-----CEEEEE
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC------EEEECCccCC-CCCCCcccEEEEEecCCC-----CEEEEE
Confidence 3578999999999999998889999999999954 6889999987 799999999999997543 489999
Q ss_pred EEecCCC------------CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC--CCCCccEEEEEEEEec
Q 021949 83 IKSDGLL------------GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS--SGKPKGELHFSYKFSE 145 (305)
Q Consensus 83 V~d~~~~------------~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~--~g~~~G~l~lsl~~~~ 145 (305)
|||++.+ .|++||++.|+|.++.. . ...||.|... ..+.+|+|+|+|+|.-
T Consensus 83 v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~-~-----------~~~w~~L~~~~~~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 83 VLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSG-E-----------MDVWYNLDKRTDKSAVSGAIRLHISVEI 147 (148)
T ss_dssp EEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCS-E-----------EEEEEECBCSSTTCCCCCEEEEEEEEEC
T ss_pred EEECCCCccccccccccCCCCccEEEEEEEHHHCcC-C-----------CCEEEEcccCCCCCCCceEEEEEEEEEe
Confidence 9999873 78999999999999842 2 3678888753 3457899999999863
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=9.7e-21 Score=153.81 Aligned_cols=119 Identities=15% Similarity=0.235 Sum_probs=97.6
Q ss_pred ccceEEEEEEEecCCCCCCCCCC-----------CCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccch
Q 021949 3 SYRALDLNLISAKHLKDVHLISK-----------MDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSL 71 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk-----------~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~ 71 (305)
..+.|+|+|++|++|+..+.+++ +||||++++.. ....+|++.++ +.||+|||+|.|.+...
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~-----~~~~~T~~~~~-t~nP~WnE~f~f~v~~~- 76 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD-----SRIGQTATKQK-TNSPAWHDEFVTDVCNG- 76 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT-----EEEEECCCCSS-CSSCEEEEEEEEEEEEE-
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC-----eEeeeeeEECC-CcCCccCCEEEEEecCC-
Confidence 46899999999999998775544 99999999965 24578888777 89999999999998653
Q ss_pred hccCceEEEEEEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEecc
Q 021949 72 AQQNRLTLDFKIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFSEP 146 (305)
Q Consensus 72 ~~~~~~~L~v~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~~~ 146 (305)
..|+|+|||++.+ +|++||++.|+|.++.... . .....|+.|. ++|+|+|+++|...
T Consensus 77 -----~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~----~----~~~~~w~~L~-----~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 77 -----RKIELAVFHDAPIGYDDFVANCTIQFEELLQNG----S----RHFEDWIDLE-----PEGKVYVIIDLSGS 134 (136)
T ss_dssp -----CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTT----C----SEEEEEEECB-----SSCEEEEEEEEEEE
T ss_pred -----CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccC----C----CCccEEEEcC-----CCeEEEEEEEEEec
Confidence 4899999999988 7899999999999998533 1 1236688775 47999999999753
No 9
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.84 E-value=2.5e-20 Score=150.38 Aligned_cols=122 Identities=12% Similarity=0.224 Sum_probs=98.6
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
+..+|+|+|++|++|+..+.++++||||++++... ..+++|+++++ +.||+|||+|.|.+.... .|.|+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~----~~~~kT~v~~~-t~nP~wne~f~f~v~~~~------~l~~~ 71 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS----GQCHSTDTVKN-TLDPKWNQHYDLYVGKTD------SITIS 71 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT----CCEEECCCCSS-CSSCEEEEEEEEEEETTC------CEEEE
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC----CceEECCccCC-CCCCCccCEEEEEeCCCC------EEEEE
Confidence 56789999999999999998999999999999753 26899999987 899999999999986532 59999
Q ss_pred EEecCCC-C---CcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC----CCCCccEEEEEEEEe
Q 021949 83 IKSDGLL-G---DKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS----SGKPKGELHFSYKFS 144 (305)
Q Consensus 83 V~d~~~~-~---d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~----~g~~~G~l~lsl~~~ 144 (305)
|||++.+ + |+|||++.|+|.+|.... . ....++.|... ..+.+|+|+|+|+.+
T Consensus 72 v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~----~-----~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 72 VWNHKKIHKKQGAGFLGCVRLLSNAISRLK----D-----TGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp EEEGGGTTSSTTTTEEEEEEECHHHHHHHT----T-----SCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred EEECCCCCCCCCCCceEEEEEeHHHhhccc----c-----cCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 9999887 3 799999999999985322 1 12355777653 224689999999763
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.8e-20 Score=149.72 Aligned_cols=118 Identities=15% Similarity=0.262 Sum_probs=94.9
Q ss_pred cceEEEEEEEecCCCCC---CCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEE
Q 021949 4 YRALDLNLISAKHLKDV---HLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLD 80 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~---~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~ 80 (305)
.++|+|+|++|++|... +.++++||||++++.+.. ..++||+++++ +.||+|||+|.|.+.... ...|+
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~-t~nP~wne~f~f~v~~~~----~~~l~ 73 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP---DSRKRTRHFNN-DINPVWNETFEFILDPNQ----ENVLE 73 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST---TCCEECCCCTT-CSSCEEEEEEEEEECTTS----CCEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC---CceEEccccCC-CCCCcccceEEEEecCCC----CCEEE
Confidence 57899999999999983 556899999999998643 36899999987 799999999999995432 25899
Q ss_pred EEEEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEE
Q 021949 81 FKIKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYK 142 (305)
Q Consensus 81 v~V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~ 142 (305)
|+|||++.++|++||++.|+|.+|.... ....|+.|.. ..+|.|+|+++
T Consensus 74 i~V~d~d~~~~~~iG~~~i~l~~l~~~~----------~~~~~~~L~~---~~~g~i~~~le 122 (126)
T 1rlw_A 74 ITLMDANYVMDETLGTATFTVSSMKVGE----------KKEVPFIFNQ---VTEMVLEMSLE 122 (126)
T ss_dssp EEEEECCSSCCEEEEEEEEEGGGSCTTC----------EEEEEEEETT---TEEEEEEEEEE
T ss_pred EEEEECCCCCCceeEEEEEEHHHccCCC----------cEEEEEEcCC---CceEEEEEEEE
Confidence 9999999888999999999999987422 3467888864 33455555544
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=5.3e-20 Score=156.02 Aligned_cols=126 Identities=22% Similarity=0.275 Sum_probs=100.5
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..++|+|+|++|++|...+.++++||||+|++.+ .++||+++++ +.||+|||+|.|.+.. ...|.|+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~------~~~kT~v~~~-tlnP~Wne~f~f~v~~------~~~L~~~ 100 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG------QSKKTEKCNN-TNSPKWKQPLTVIVTP------VSKLHFR 100 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT------EEEECCCCSS-CSSCEEEEEEEEEECT------TCEEEEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC------EEeEccccCC-CCCCeECCEEEEEeCC------CCEEEEE
Confidence 4578999999999999544455699999999975 6899999987 8999999999999853 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC--CCCCccEEEEEEEEecc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS--SGKPKGELHFSYKFSEP 146 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~--~g~~~G~l~lsl~~~~~ 146 (305)
|||++.+ .|++||++.|+|.+|.... .+. .+....|+.|... +.+..|+|.|+|++...
T Consensus 101 V~D~d~~~~dd~lG~~~i~l~~l~~~~----~~~-~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 101 VWSHQTLKSDVLLGTAALDIYETLKSN----NMK-LEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEECCSSSCCEEEEEEEEEHHHHHHHT----TTE-ESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred EEECCCCCCCceEEEEEEEHHHhcccC----CCC-cceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999988 7899999999999998643 211 0112568888765 34568999999998865
No 12
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.81 E-value=1.2e-19 Score=146.98 Aligned_cols=121 Identities=23% Similarity=0.322 Sum_probs=84.9
Q ss_pred CccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEE
Q 021949 2 ASYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDF 81 (305)
Q Consensus 2 ~~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v 81 (305)
|+.+.|.|+|++|++|.. .+++||||+|+ . .+.+|+++++++.||+|||+|.|.+.... ..|+|
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~------~~~kt~~~~~~t~nP~WnE~f~f~v~~~~-----~~L~~ 65 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK--V------QNVKSTTIAVRGSQPSWEQDFMFEINRLD-----LGLTV 65 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE--E------TTEEEECCCEESSSCEEEEEEEEEECCCS-----SEEEE
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE--e------cCEEEeEecCCCCCceECCEEEEEEeCCC-----CeEEE
Confidence 466899999999998853 57899999999 2 23456666545899999999999997532 47999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCC-cceEEEEEeecCCCCCccE-------EEEEEEEe
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAK-SMKFVTYQVRSSSGKPKGE-------LHFSYKFS 144 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~-~~~~~~~~l~~~~g~~~G~-------l~lsl~~~ 144 (305)
+|||++ + +|++||++.|+|.+|.... .++. .+...+|++..++++.+|+ |.++++|.
T Consensus 66 ~V~D~d-~~~dd~iG~~~i~l~~l~~~~-----~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 66 EVWNKG-LIWDTMVGTVWIPLRTIRQSN-----EEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp EEEECC-SSCEEEEEEEEEEGGGSCBCS-----SCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred EEEECC-CCCCCeEEEEEEEHHHhhhcC-----CCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence 999999 6 8999999999999987533 1221 2334456666666776666 88888773
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79 E-value=1.3e-18 Score=141.11 Aligned_cols=110 Identities=20% Similarity=0.273 Sum_probs=90.2
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEE-eccchhccCceEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT-FNQSLAQQNRLTLDFK 82 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~-v~~~~~~~~~~~L~v~ 82 (305)
.+.|+|+|++|++|+. +.++++||||+|++..+.. ...++||+++++ +.||+|||+|.|. +....+ ....|.|+
T Consensus 19 ~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~-~~~~~kT~v~~~-t~nP~wnE~f~f~~v~~~~l--~~~~L~~~ 93 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTH-KTSKRKTKISRK-TRNPTFNEMLVYSGYSKETL--RQRELQLS 93 (134)
T ss_dssp TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSS-SCCCEECCCCCS-CSSCEEEEEEEEESCCHHHH--TTCEEEEE
T ss_pred CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCC-CCceecCCcCcC-CCCCCCccEEEECCcCHHHh--CcCEEEEE
Confidence 4789999999999996 6678999999999975422 146899999987 8999999999999 765433 22589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
|||++.+ +|++||++.|+|.++.... ....||.|..
T Consensus 94 V~d~d~~~~~~~lG~~~i~l~~l~~~~----------~~~~W~~L~~ 130 (134)
T 2b3r_A 94 VLSAESLRENFFLGGITLPLKDFNLSK----------ETVKWYQLTA 130 (134)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGSCTTS----------CEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEhhhccCCC----------CcceeEECCC
Confidence 9999988 7899999999999997422 2477999875
No 14
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=1.4e-18 Score=143.01 Aligned_cols=109 Identities=21% Similarity=0.230 Sum_probs=92.2
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.++|+|+|++|++|...+.++++||||+|++..+.. ...++||+++++ +.||+|||+|.|.+..... ...|+|+|
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~---~~~L~i~V 104 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPK-SESKQKTKTIKC-SLNPEWNETFRFQLKESDK---DRRLSVEI 104 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTT-CSSCEECCCCSS-CSSCEEEEEEEEECCSGGG---GCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCC-CcceEecceeCC-CCCCcCCcEEEEEeccccC---CCEEEEEE
Confidence 467999999999999998889999999999986432 146899999998 8999999999999976432 24799999
Q ss_pred EecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 84 KSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 84 ~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
||++.+ +|++||++.|+|.+|.... ...||.|..
T Consensus 105 ~d~d~~~~~~~iG~~~i~l~~l~~~~-----------~~~W~~L~~ 139 (149)
T 1a25_A 105 WDWDLTSRNDFMGSLSFGISELQKAG-----------VDGWFKLLS 139 (149)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHTTCC-----------EEEEEECBC
T ss_pred EECCCCCCCCEEEEEEEEHHHhCcCc-----------cCCeEEccC
Confidence 999988 7899999999999997422 467899875
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.79 E-value=8.5e-19 Score=143.18 Aligned_cols=110 Identities=22% Similarity=0.230 Sum_probs=91.9
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|+..+.++++||||+|++..+. ..+++|+++++ +.||+|||+|.|.+....+. ...|+|+
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~---~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~L~i~ 105 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK---KKKFETKVHRK-TLNPVFNEQFTFKVPYSELG--GKTLVMA 105 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCC---SCCEECCCCCS-CSSCEEEEEEEECCCHHHHT--TCEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCC---CccEECccCcC-CCCCcCcCeEEEeecHhhcC--CCEEEEE
Confidence 457899999999999998888899999999997543 36899999888 79999999999998654432 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
|||++.+ +|++||++.|+|.++.... ....||.|..
T Consensus 106 V~d~d~~~~~~~iG~~~i~l~~l~~~~----------~~~~W~~L~~ 142 (143)
T 3f04_A 106 VYDFDRFSKHDIIGEFKVPMNTVDFGH----------VTEEWRDLQS 142 (143)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGCCTTS----------CEEEEEECBC
T ss_pred EEeCCCCCCCceEEEEEEEHHHccCCC----------CcceEEECcC
Confidence 9999988 7899999999999987432 2467888863
No 16
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=1.5e-18 Score=143.51 Aligned_cols=110 Identities=22% Similarity=0.230 Sum_probs=92.0
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||+|++..+. ..++||+++++ +.||+|||+|.|.+....+. ...|+|+
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~L~i~ 113 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK---KKKFETKVHRK-TLNPVFNEQFTFKVPYSELG--GKTLVMA 113 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTC---CSCEECCCCTT-CSSCEEEEEEEECCCHHHHT--TCEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCC---CceEeccccCC-CCCCcCcccEEEeecHHHcC--CCEEEEE
Confidence 357899999999999999888999999999997543 36889999988 79999999999998654332 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
|||++.+ +|++||++.|+|.++.... ....||.|..
T Consensus 114 V~d~d~~~~~~~iG~~~i~l~~l~~~~----------~~~~W~~L~~ 150 (152)
T 1rsy_A 114 VYDFDRFSKHDIIGEFKVPMNTVDFGH----------VTEEWRDLQS 150 (152)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGCCCSS----------CEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEchhccCCC----------CcceEEECCC
Confidence 9999988 7999999999999986422 2477998874
No 17
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=3.7e-19 Score=148.18 Aligned_cols=113 Identities=10% Similarity=0.071 Sum_probs=92.0
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||++++.+.......++||+++++ ++||+|||+|.|.|....+. ...|+|+
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~l~--~~~L~~~ 117 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPALH--QKTLRVD 117 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHHHH--HCEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHHhC--cCEEEEE
Confidence 35789999999999999988899999999999863221134899999988 89999999999998765432 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEee
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVR 127 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~ 127 (305)
|||++.+ +|++||++.|+|.++.... .....||.|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~---------~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSG---------ERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTC---------CCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCC---------CccccceEcc
Confidence 9999988 7899999999999986322 1247788875
No 18
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=141.69 Aligned_cols=111 Identities=19% Similarity=0.306 Sum_probs=91.7
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEecc-chhccCceEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQ-SLAQQNRLTLDF 81 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~-~~~~~~~~~L~v 81 (305)
..+.|+|+|++|++|...+.++++||||+|++.++. ..++||+++++ +.||+|||+|.|.+.. ..+ ....|.|
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~i 97 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDK---KHKLETKVKRK-NLNPHWNETFLFEGFPYEKV--VQRILYL 97 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCC---SSEEECCCCTT-CSSCCCCEEEEECSCCHHHH--TTSEEEE
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCC---CccEeCceEcC-CCCCccccEEEECccCHHHc--ccCEEEE
Confidence 457899999999999999888999999999997543 36899999887 8999999999998532 222 2358999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS 129 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~ 129 (305)
+|||++.+ +|++||++.|+|.+|.... ....||.|...
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~----------~~~~W~~L~~~ 136 (141)
T 2d8k_A 98 QVLDYDRFSRNDPIGEVSIPLNKVDLTQ----------MQTFWKDLKPS 136 (141)
T ss_dssp EEEECCSSSSCEEEEEEEEETTTSCTTS----------CEEEEECCEEC
T ss_pred EEEECCCCCCCcEEEEEEEEhhhhcCCC----------CccEEEECcCC
Confidence 99999988 7899999999999997532 25779988864
No 19
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=1.1e-18 Score=141.96 Aligned_cols=116 Identities=16% Similarity=0.255 Sum_probs=92.9
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEe-ccchhccCceEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTF-NQSLAQQNRLTLDFK 82 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v-~~~~~~~~~~~L~v~ 82 (305)
.+.|+|+|++|++|...+.++++||||+|++..+.. ...++||+++++ +.||+|||+|.|.+ ....+ ....|+|+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~i~ 95 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRS-DKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREF--RERMLEIT 95 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCS-SSSCCBCCCCSS-CSSCCCCCCCEECSCCTTGG--GTCEEEEE
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCC-CCcceeCccccC-CCCCccccEEEEccCCHHHh--cCCEEEEE
Confidence 578999999999999998889999999999965321 147899999988 89999999999994 43322 23589999
Q ss_pred EEecCCC-C--CcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC-CCCCc
Q 021949 83 IKSDGLL-G--DKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS-SGKPK 134 (305)
Q Consensus 83 V~d~~~~-~--d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~-~g~~~ 134 (305)
|||++.+ . |++||++.|+|.++.... ...||.|... +++..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-----------~~~W~~L~~~~~g~~s 140 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-----------EPHWYKLQTHDSGPSS 140 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-----------EEEEEECBCCSSCCCC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-----------CCceEECcccccCCCC
Confidence 9999988 4 899999999999987422 4679999864 34443
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.78 E-value=2.8e-18 Score=138.72 Aligned_cols=109 Identities=21% Similarity=0.230 Sum_probs=92.0
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.|+|+|++|++|+..+.++++||||++++..+... ..+++|+++++ +.||.|||+|.|.+..... ...|.|+|
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~-~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~---~~~l~i~v 89 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKN-ESKQKTKTIRS-TLNPQWNESFTFKLKPSDK---DRRLSVEI 89 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTC-CCCEECCCCCS-CSSCEEEEEEEEECCGGGG---GCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCC-CeeecCceEcC-CCCCCcccEEEEEcCchhc---CCEEEEEE
Confidence 4789999999999999988899999999999753221 46899999988 7999999999999875433 24799999
Q ss_pred EecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 84 KSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 84 ~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
||++.+ .|++||++.|+|.+|.... ...||.|..
T Consensus 90 ~d~d~~~~~~~iG~~~i~l~~l~~~~-----------~~~W~~L~~ 124 (137)
T 3rdl_A 90 WDWDRTTRNDFMGSLSFGVSELMKMP-----------ASGWYKLLN 124 (137)
T ss_dssp EECCSSSCCEEEEEEEEEHHHHHHSC-----------EEEEEECBC
T ss_pred EECCCCCCCceEEEEEEeHHHhccCc-----------cCceEECcC
Confidence 999988 7899999999999997532 477999876
No 21
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.78 E-value=1.1e-18 Score=144.52 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=95.6
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|.|+|++|++|...+ ++++||||+|++..+... ..+++|+++++ +.||+|||+|.|.+...... ..|.|+
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~-~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~---~~L~i~ 98 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSR-LRHQKTQTVPD-CRDPAFHEHFFFPVQEEDDQ---KRLLVT 98 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCC-TTCEECCCCTT-CSSCEEEEEEEEECCGGGTT---SEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCC-ccEEeccccCC-CCCCccccEEEEecccHHhC---CEEEEE
Confidence 4578999999999999888 689999999999754322 47899999987 89999999999998654432 359999
Q ss_pred EEecCCC-C-CcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEE
Q 021949 83 IKSDGLL-G-DKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHF 139 (305)
Q Consensus 83 V~d~~~~-~-d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~l 139 (305)
|||++.+ + |++||++.|+|.+|.... .....||.|...+....+.|.+
T Consensus 99 V~d~d~~~~~d~~lG~~~i~l~~l~~~~---------~~~~~W~~L~~~~~g~~~~lkv 148 (153)
T 3fbk_A 99 VWNRASQSRQSGLIGCMSFGVKSLLTPD---------KEISGWYYLLGEHLGRTKHLKV 148 (153)
T ss_dssp EEECCSSGGGCEEEEEEEEEHHHHTC-----------CCEEEEEECBCTTGGGTCCCBC
T ss_pred EEeCCCCCCCCcEEEEEEEEHHHhcCCC---------CccccEEECCChhhccccccee
Confidence 9999987 5 899999999999997412 1247799998754433444443
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.78 E-value=1.5e-18 Score=142.78 Aligned_cols=114 Identities=15% Similarity=0.239 Sum_probs=93.3
Q ss_pred ccceEEEEEEEecCCCCCC-CCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEE
Q 021949 3 SYRALDLNLISAKHLKDVH-LISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDF 81 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~-~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v 81 (305)
..+.|+|+|++|++|...+ .++++||||++++..+.. ...+++|+++++ +.||+|||+|.|.|....+. ...|+|
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~--~~~L~~ 96 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKS-RQGKRKTSIKRD-TVNPLYDETLRYEIPESLLA--QRTLQF 96 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCS-GGGEEECCCCSS-CSSCEEEEEEEEECCSTTGG--GCEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCc-ccCccccccCCC-CCCCcEeeEEEEEeChhHhC--ceEEEE
Confidence 3578999999999999877 578999999999986432 135899999987 89999999999998765432 257999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCC
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSS 130 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~ 130 (305)
+|||++.+ +|++||++.|+|.++.... ....||.|..+.
T Consensus 97 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~----------~~~~W~~L~~~~ 136 (148)
T 3fdw_A 97 SVWHHGRFGRNTFLGEAEIQMDSWKLDK----------KLDHCLPLHGKI 136 (148)
T ss_dssp EEEEECGGGCEEEEEEEEEEHHHHHHHC----------CSEEEEECBCC-
T ss_pred EEEECCCCcCCcEEEEEEEEcccccccC----------CccceEECcCcc
Confidence 99999988 7899999999999997533 236799998643
No 23
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=4.8e-18 Score=137.97 Aligned_cols=111 Identities=26% Similarity=0.369 Sum_probs=90.1
Q ss_pred ccceEEEEEEEecCCCCCCCC-CCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEE-eccchhccCceEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLI-SKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT-FNQSLAQQNRLTLD 80 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~-gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~-v~~~~~~~~~~~L~ 80 (305)
..+.|+|+|++|++|...+.+ +++||||++++..+. ..+++|+++++ +.||+|||+|.|. +....+. ...|+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~---~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~~~--~~~l~ 93 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEK---KHKVKTRVLRK-TLDPAFDETFTFYGIPYTQIQ--ELALH 93 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTT---CSEEECCCCSS-CSSCEEEEEEEEECCCSTTGG--GCEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCC---CceEecCcCcC-CCCCcEeeEEEEcCcCHHHhc--cCEEE
Confidence 357899999999999998886 889999999998643 37999999987 8999999999996 6554332 25899
Q ss_pred EEEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 81 FKIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 81 v~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
|+|||++.+ +|++||++.|+|.+|.... + ....|+.|..
T Consensus 94 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~----~~~~~~~l~~ 133 (138)
T 1ugk_A 94 FTILSFDRFSRDDIIGEVLIPLSGIELSE-----G----KMLMNREIIS 133 (138)
T ss_dssp EEEEEECSSCCCCCCEEEEEECTTCCCTT-----C----CEEEEEECBS
T ss_pred EEEEECCCCCCCcEEEEEEEehhHccCCC-----C----cchhhhhhhc
Confidence 999999988 7899999999999997532 1 2345677764
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=141.37 Aligned_cols=117 Identities=21% Similarity=0.270 Sum_probs=92.6
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++ +||||+|++..+.. ...+++|+++++ +.||+|||+|.|.+....+. ...|+|+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~L~i~ 96 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKR-RSGRRKTHVSKK-TLNPVFDQSFDFSVSLPEVQ--RRTLDVA 96 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCC-SSSCEECCCCCS-CSSCEEEEEEEECCCHHHHH--HCEEEEE
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCC-CCCcccCCccCC-CCCCCcCceEEEEecHHHhC--cCEEEEE
Confidence 3578999999999999988888 99999999975432 136899999987 89999999999998654332 2489999
Q ss_pred EEecCCC-C--CcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCc
Q 021949 83 IKSDGLL-G--DKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPK 134 (305)
Q Consensus 83 V~d~~~~-~--d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~ 134 (305)
|||++.+ . |++||++.|+|.++.... ....||.|...+.+..
T Consensus 97 V~d~d~~~~~~~~~iG~~~i~l~~~~~~~----------~~~~W~~L~~~~~~~~ 141 (142)
T 2dmg_A 97 VKNSGGFLSKDKGLLGKVLVALASEELAK----------GWTQWYDLTEDSGPSS 141 (142)
T ss_dssp EEECCCSSCCSCCCCEEEEEECCCSTTTT----------CBCCBCCCBCSCSCCC
T ss_pred EEECCCccccCCcEEEEEEEecccccccc----------cccceeeccCCCCCCC
Confidence 9999976 3 469999999999987422 2356888887554443
No 25
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=3.9e-18 Score=136.58 Aligned_cols=109 Identities=15% Similarity=0.234 Sum_probs=85.7
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEe-ccchhccCceEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTF-NQSLAQQNRLTLDF 81 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v-~~~~~~~~~~~L~v 81 (305)
..+.|+|+|++|++|...+.++++||||++++..+.. ...+++|+++++ +.||+|||+|.|.+ ..... ....|+|
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~--~~~~l~~ 91 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRS-DKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREF--RERMLEI 91 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCS-GGGEEECCCCSS-BSSCEEEEEEEECSCCGGGG--GGCEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCC-CCcceecccccC-CCCCccccEEEEccCCHHHh--cCCeEEE
Confidence 3578999999999999998889999999999975332 147999999988 89999999999995 32222 2358999
Q ss_pred EEEecCCC-C--CcceeEEEEeCcccccccCCCCCCCCCcceEEEEEe
Q 021949 82 KIKSDGLL-G--DKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQV 126 (305)
Q Consensus 82 ~V~d~~~~-~--d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l 126 (305)
+|||++.+ . |++||++.|+|.++.... ...||.|
T Consensus 92 ~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-----------~~~W~~L 128 (129)
T 2bwq_A 92 TLWDQARVREEESEFLGEILIELETALLDD-----------EPHWYKL 128 (129)
T ss_dssp EEEEC-------CEEEEEEEEEGGGCCCSS-----------CEEEEEC
T ss_pred EEEECCcCcCcCCceeEEEEEEccccCCCc-----------CCccEEC
Confidence 99999988 4 899999999999987422 3668876
No 26
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=4.2e-18 Score=138.89 Aligned_cols=112 Identities=21% Similarity=0.322 Sum_probs=90.8
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEE-eccchhccCceEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFT-FNQSLAQQNRLTLDF 81 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~-v~~~~~~~~~~~L~v 81 (305)
..+.|+|+|++|++|...+.++++||||+|++.++.. ...++||+++++ +.||+|||+|.|. +...... ...|+|
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~--~~~l~i 102 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGAS-KSNKLRTKTLRN-TRNPVWNETLQYHGITEEDMQ--RKTLRI 102 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCS-GGGEEECCCCCS-CSSCEEEEEEEEESCCHHHHH--HCEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCC-CcceeeCCcCCC-CCCCcCcCEEEEcccCHHHcc--CCEEEE
Confidence 4578999999999999998889999999999986432 247899999987 8999999999998 6543321 248999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
+|||++.+ +|++||++.|+|.+|.... ....|+.|.+
T Consensus 103 ~V~d~d~~~~d~~iG~~~i~l~~l~~~~----------~~~~~~~L~~ 140 (142)
T 2chd_A 103 SVCDEDKFGHNEFIGETRFSLKKLKANQ----------RKNFNICLER 140 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEGGGCCTTC----------CEEEEEECBC
T ss_pred EEEECCCCCCCcEEEEEEEEHHHcCCCC----------ccEEEEeccc
Confidence 99999988 7899999999999987533 3466666654
No 27
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=1.3e-17 Score=151.08 Aligned_cols=128 Identities=21% Similarity=0.265 Sum_probs=105.9
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+..+++||||++++..+. ..+++|+++++ +.||+|||+|.|.+....+ ....|+|+
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~---~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~--~~~~l~~~ 90 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK---KKKFETKVHRK-TLNPVFNEQFTFKVPYSEL--AGKTLVMA 90 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCT---TSCEECCCCCS-CSSCEEEEEEEECCCGGGC--TTCEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCC---CceEeCCcccC-CCCCeeCceEEEEechHHh--CcCEEEEE
Confidence 457899999999999998888999999999998643 35889999887 7999999999999865432 23589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCC---CCCccEEEEEEEEecc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSS---GKPKGELHFSYKFSEP 146 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~---g~~~G~l~lsl~~~~~ 146 (305)
|||++.+ .|++||++.|+|.++.... ....|+.|.... ....|.|.|++++.+.
T Consensus 91 V~d~d~~~~~~~lG~~~i~l~~l~~~~----------~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~ 148 (284)
T 2r83_A 91 VYDFDRFSKHDIIGEFKVPMNTVDFGH----------VTEEWRDLQSAEKEEQEKLGDICFSLRYVPT 148 (284)
T ss_dssp EEECCSSSCCCEEEEEEEEGGGCCCSS----------CEEEEEECBCCSSCCCCCCCEEEEEEEEETT
T ss_pred EEECCCCCCCceeEEEEEcchhcccCC----------cceeEEEeeccccccccccccEEEEEEecCc
Confidence 9999988 7899999999999987432 246789987643 3468999999998764
No 28
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.76 E-value=6e-18 Score=142.56 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=92.0
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
+...|.|+|++|++|. .++++||||+|+ . ++.||+++++++.||+|||+|.|.+.... ..|+|+
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~------~~~kt~~~~~~t~nP~WnE~f~f~v~~~~-----~~L~~~ 75 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--V------QNVESTTIAVRGSQPSWEQDFMFEINRLD-----LGLTVE 75 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--E------TTEEEECCCEESSSCEEEEEEEEECCCTT-----SEEEEE
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--e------cceEEEEecCCCCCCCCCCEEEEEeeCCC-----CEEEEE
Confidence 4578999999999884 357899999999 2 24567776655899999999999997533 479999
Q ss_pred EEecCCCCCcceeEEEEeCcccccccCCCCCCCCC-cceEEEEEeecCCCCCccE-------EEEEEEEeccC
Q 021949 83 IKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAK-SMKFVTYQVRSSSGKPKGE-------LHFSYKFSEPT 147 (305)
Q Consensus 83 V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~-~~~~~~~~l~~~~g~~~G~-------l~lsl~~~~~~ 147 (305)
|||++...|++||++.|+|.++.... .++. .+...+|++.+++++.+|+ |.++++|....
T Consensus 76 V~D~d~~~dd~iG~~~i~L~~l~~~~-----~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~~ 143 (167)
T 2cjs_A 76 VWNKGLIWDTMVGTVWIPLRTIRQSN-----EEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELPL 143 (167)
T ss_dssp EEECCSSCCEEEEEEEEEGGGSCBCS-----SCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCC
T ss_pred EEECCCCCCceEEEEEEEHHHhcccC-----cCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecCC
Confidence 99999338999999999999987533 1221 2445567766656655444 67777776543
No 29
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.4e-18 Score=140.37 Aligned_cols=98 Identities=21% Similarity=0.254 Sum_probs=81.7
Q ss_pred ccceEEEEEEEecCCCCC-------CCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccC
Q 021949 3 SYRALDLNLISAKHLKDV-------HLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQN 75 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~-------~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~ 75 (305)
..+.|+|+|++|++|+.. +.++++||||+|++..+. ..+++|+++++ +.||+|||+|.|.|....+.
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~---~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~-- 97 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQ---KNSKQTGVKRK-TQKPVFEERYTFEIPFLEAQ-- 97 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCC---SSCEECCCCCS-CSSCCCCBCCEECCCHHHHH--
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCC---CcceEeecccC-CCCCeEeeeEEEEeChHHhc--
Confidence 457899999999999974 234689999999998643 35889999887 89999999999998754432
Q ss_pred ceEEEEEEEecCCC-CCcceeEEEEeCccccc
Q 021949 76 RLTLDFKIKSDGLL-GDKTVGEVIVPIKELLD 106 (305)
Q Consensus 76 ~~~L~v~V~d~~~~-~d~~IG~~~vpL~~l~~ 106 (305)
...|+|+|||++.+ +|++||++.|+|.++..
T Consensus 98 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~ 129 (147)
T 2enp_A 98 RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDL 129 (147)
T ss_dssp HSEEEEEEECCSTTCCSCCCEEEEEETTTSCT
T ss_pred cCEEEEEEEECCCCcCCcEEEEEEEechhcCC
Confidence 24899999999988 78899999999999964
No 30
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=1.3e-18 Score=141.85 Aligned_cols=113 Identities=14% Similarity=0.202 Sum_probs=90.8
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCC--------CceEEeEecCCCCCCCeeeceEEEE-eccchhcc
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIK--------KQKVKSHVDRSGGSNPTWNFPIKFT-FNQSLAQQ 74 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~--------~~~~kT~v~k~~~~nP~Wne~f~f~-v~~~~~~~ 74 (305)
.+.|+|+|++|++|...+.++++||||+|++....... ..++||+++++ +.||+|||+|.|. +....+
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~l-- 93 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK-SLNPEWNQTVIYKSISMEQL-- 93 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH-HHSCEEEEEEEECSCCHHHH--
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCC-CCCCCCCCEEEECCcCHHHc--
Confidence 46899999999999999988999999999998743110 13688999887 8999999999997 654332
Q ss_pred CceEEEEEEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC
Q 021949 75 NRLTLDFKIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS 129 (305)
Q Consensus 75 ~~~~L~v~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~ 129 (305)
....|+|+|||++.+ +|++||++.|+|.++.... ....||.|...
T Consensus 94 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~----------~~~~W~~L~~~ 139 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD----------NTPRWYPLKEQ 139 (142)
T ss_dssp TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT----------TCCEEEECBCC
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeccccccCC----------CCCeEEECCcc
Confidence 235899999999988 7899999999999987533 23578998864
No 31
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.75 E-value=6e-18 Score=142.78 Aligned_cols=110 Identities=20% Similarity=0.176 Sum_probs=89.6
Q ss_pred cceEEEEEEEecCCCCCCC-CCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHL-ISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~-~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
.+.|+|+|++|++|...+. ++++||||+|++..+.. ...++||+++++ +.||+|||+|.|.+.... ..|+|+
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~-----~~L~~~ 101 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGA-CIAKKKTRIARK-TLDPLYQQSLVFDESPQG-----KVLQVI 101 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTE-EEEEEECCCCCS-CSSCEEEEEEECSSCCTT-----EEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCc-cccceeCccCCC-CCCCCCCcEEEEEecCCC-----CEEEEE
Confidence 4689999999999999885 68999999999986421 124889999887 899999999999985432 689999
Q ss_pred EE-ecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCC
Q 021949 83 IK-SDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSS 130 (305)
Q Consensus 83 V~-d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~ 130 (305)
|| |++.+ +|++||++.|+|.++.... ....||.|...+
T Consensus 102 V~~d~d~~~~d~~iG~~~i~l~~l~~~~----------~~~~W~~L~~~~ 141 (171)
T 2q3x_A 102 VWGDYGRMDHKCFMGVAQILLEELDLSS----------MVIGWYKLFPPS 141 (171)
T ss_dssp EEEECSTTCSSEEEEEEEECGGGSCTTS----------CEEEEEECBCGG
T ss_pred EEEcCCCCCCCCEEEEEEEEHHHcccCC----------CcceeEECCCcc
Confidence 99 99888 7899999999999997422 247899998643
No 32
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=1.2e-17 Score=135.98 Aligned_cols=109 Identities=11% Similarity=0.111 Sum_probs=87.3
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++ .+.++++||||+|++..+.. ..+++|+++++ ++||+|||+|.|.+....+. ...|.|+
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~-tlnP~wnE~f~f~v~~~~l~--~~~L~~~ 95 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTG--SVEAQTALKKR-QLHTTWEEGLVLPLAEEELP--TATLTLT 95 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTE--EEEEECCCCCC-CSSEECSSCEEEECCTTSST--TCEEEEE
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCC--cccEecccCcC-CCCCcCCceEEEEecHHHcC--CCEEEEE
Confidence 35789999999994 45678999999999965321 35789999887 89999999999998765432 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS 129 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~ 129 (305)
|||++.+ +|++||++.|+|.++.... ....|+.|...
T Consensus 96 V~d~d~~~~dd~lG~~~i~l~~l~~~~----------~~~~W~~L~~~ 133 (138)
T 1wfm_A 96 LRTCDRFSRHSVAGELRLGLDGTSVPL----------GAAQWGELKTS 133 (138)
T ss_dssp EEECCSSCTTSCSEEEEEESSSSSSCT----------TCCEEEECCCC
T ss_pred EEECCCCCCCcEEEEEEEEcccccCcc----------cccceeeCcCC
Confidence 9999988 7899999999999986322 23678888864
No 33
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.74 E-value=2e-17 Score=133.70 Aligned_cols=99 Identities=19% Similarity=0.256 Sum_probs=84.0
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||++++.++... ..+++|+++++ +.||+|||+|.|.+....+. ...|.|+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~-~~~~kT~~~~~-t~nP~wne~f~f~v~~~~l~--~~~l~~~ 89 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKR-VEKKKTVTKKR-NLNPIFNESFAFDIPTEKLR--ETTIIIT 89 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEE-EEEEECCCCSS-CSSCEEEEEEEEECCGGGGG--GEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCc-cceEeCccccC-CCCCcCcceEEEECChhhcC--ceEEEEE
Confidence 45789999999999999988899999999999864321 35889999888 79999999999998765432 3589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELL 105 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~ 105 (305)
|||++.+ +|++||++.|+|.++.
T Consensus 90 V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 90 VMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEECCSSSCCEEEEEEEESSSSCH
T ss_pred EEECCCCCCCcEEEEEEEccccCC
Confidence 9999988 7899999999999643
No 34
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.74 E-value=4.2e-17 Score=136.66 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=83.7
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||+|++.++..+ ..+++|+++++ +.||+|||+|.|.+....+. ...|.|+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~-~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~L~i~ 110 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGK-KAKHKTQIKKK-TLNPEFNEEFFYDIKHSDLA--KKSLDIS 110 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCS-CSSCEEEEEEEEECCGGGGG--GCEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCc-cceEeCCcccC-CCCCcccceEEEEcchHhcC--CCEEEEE
Confidence 45789999999999999988899999999999864322 46899999987 89999999999999654332 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcccc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELL 105 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~ 105 (305)
|||++.+ +|++||++.|+|.++.
T Consensus 111 V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 111 VWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EEECCSSSCCEEEEEEEEETTCCH
T ss_pred EEECCCCCCCcEEEeEEEecccCC
Confidence 9999988 7899999999999853
No 35
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.74 E-value=2.9e-17 Score=136.55 Aligned_cols=97 Identities=18% Similarity=0.294 Sum_probs=82.2
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||+|++..+.. ...+++|+++++ +.||+|||+|.|.|....+. ...|.|+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~l~i~ 98 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK-RLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQ--KVQVVVT 98 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE-EEEEEECCCCCS-CSSCEEEEEEEEECCGGGGG--GCEEEEE
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCc-eeceeeCceecC-CCCCcccceEEEEcCHHHhC--CcEEEEE
Confidence 3578999999999999999889999999999975421 135789999887 89999999999998665432 2589999
Q ss_pred EEecCCC-CCcceeEEEEeCcc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKE 103 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~ 103 (305)
|||++.+ .|++||++.|+|.+
T Consensus 99 V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 99 VLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp EEECCSSSCCEEEEEEEEETTC
T ss_pred EEECCCCCCCceEEEEEECCCC
Confidence 9999988 79999999999985
No 36
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.73 E-value=2.4e-17 Score=136.15 Aligned_cols=97 Identities=16% Similarity=0.294 Sum_probs=76.9
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|+|+|++|++|...+.++++||||+|++..+.. ...++||+++++ +.||+|||+|.|.|....+ ....|+|+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l--~~~~l~v~ 103 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKK-RISKKKTHVKKC-TPNAVFNELFVFDIPCESL--EEISVEFL 103 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTE-EEEEEECCCCCS-CSSEEEEEEEEEECCSSSS--TTEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCe-EeceEecCcccC-CCCCeecceEEEECCHHHh--CceEEEEE
Confidence 3578999999999999988889999999999975421 123789999988 8999999999999876543 23589999
Q ss_pred EEecCCC-CCcceeEEEEeCcc
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKE 103 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~ 103 (305)
|||++.+ .|++||++.|+|.+
T Consensus 104 V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 104 VLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEECCTTSCCEEEEEEEESTTC
T ss_pred EEeCCCCCCCcEEEEEEECCCC
Confidence 9999988 78999999999988
No 37
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.71 E-value=8.3e-17 Score=130.52 Aligned_cols=119 Identities=16% Similarity=0.248 Sum_probs=99.3
Q ss_pred eEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEEEe
Q 021949 6 ALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKIKS 85 (305)
Q Consensus 6 ~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V~d 85 (305)
.|+|+|.+|.+|+ ++.|+|+++.+.+ .++||+++++++.||+|||.|+|++.... +....|+|.|+|
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg------~k~kTkvi~~~~~npvfnE~F~wpl~~~l--d~~e~L~v~V~d 88 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRG------QSFYSRVLENCEDVADFDETFRWPVASSI--DRNEVLEIQIFN 88 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETT------EEEECCCEEEECSCEEEEEEEEEEESSCC--CTTCEEEEEEEE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEec------cceeeEEeccCCCCceEcceEEecCCCCC--CCCCEEEEEEEE
Confidence 5899999999998 5789999999965 79999999855899999999999997633 345799999999
Q ss_pred cCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCC-ccEEEEEEEEeccC
Q 021949 86 DGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKP-KGELHFSYKFSEPT 147 (305)
Q Consensus 86 ~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~-~G~l~lsl~~~~~~ 147 (305)
.+.+ +|++||++.|+|.+|.... ....+-.|.+.+.++ .++|.|+|+|.+..
T Consensus 89 ~~~v~~nrlIG~~~i~Lq~lv~~~----------~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 89 YSKVFSNKLIGTFRMVLQKVVEEN----------RVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp ECTTSCCEEEEEEEEESHHHHHHS----------EEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred CccccCCCEEEEEEEEhHHhccCC----------eEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 9888 8999999999999999644 134566777766654 58899999998753
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.70 E-value=2.2e-16 Score=144.29 Aligned_cols=129 Identities=19% Similarity=0.265 Sum_probs=100.5
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..+.|.|+|++|++|...+.++++||||++++..+. ..+++|+++++ +.||+|||+|.|.+....+. ...|+|+
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~---~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~L~~~ 91 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDR---KKKFQTKVHRK-TLNPIFNETFQFSVPLAELA--QRKLHFS 91 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTST---TSCEECCCCCS-CSSCEEEEEEEEECCGGGGS--SCCCEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCC---CeeEeCCccCC-CCCCcEeeEEEEEecHHHhc--CCEEEEE
Confidence 457899999999999999888999999999996432 36889999887 79999999999998654432 2489999
Q ss_pred EEecCCC-CCcceeEEEEe-CcccccccCCCCCCCCCcceEEEEEeecC--CCCCccEEEEEEEEecc
Q 021949 83 IKSDGLL-GDKTVGEVIVP-IKELLDSSSSSSSGDAKSMKFVTYQVRSS--SGKPKGELHFSYKFSEP 146 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vp-L~~l~~~~~~~~~~~g~~~~~~~~~l~~~--~g~~~G~l~lsl~~~~~ 146 (305)
|||++.+ +|++||++.|+ |.++.... . ....|+.|... .....|+|.|++++.+.
T Consensus 92 V~d~d~~~~~~~iG~~~i~~l~~~~~~~------~---~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 92 VYDFDRFSRHDLIGQVVLDNLLELAEQP------P---DRPLWRDILEGGSEKADLGELNFSLCYLPT 150 (296)
T ss_dssp EEECCSSSCCCEEEEEECCCTTGGGSSC------S---SCCCCEECBCCSSCCSCCCEEEEEEEEETT
T ss_pred EEEcCCCCCCceEEEEEeccccccccCC------c---cceeeeccccccccccccceEEEEEEeccc
Confidence 9999988 78999999996 55554322 1 12446666643 33467999999998764
No 39
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.68 E-value=5.5e-16 Score=155.21 Aligned_cols=124 Identities=19% Similarity=0.300 Sum_probs=103.3
Q ss_pred cceEEEEEEEecCCCCCCC--CCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEE
Q 021949 4 YRALDLNLISAKHLKDVHL--ISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDF 81 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~--~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v 81 (305)
..+|+|+|++|++|...+. .+++||||+|++.+.+.+ ..+.||+++++++.||+|||+|.|.|....+ ..|+|
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el----~~L~~ 570 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPDL----ALVRF 570 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGGG----CEEEE
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCCC----CEEEE
Confidence 4689999999999998773 688999999999764221 3688999999866999999999999976543 48999
Q ss_pred EEEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCC--ccEEEEEEEEec
Q 021949 82 KIKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKP--KGELHFSYKFSE 145 (305)
Q Consensus 82 ~V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~--~G~l~lsl~~~~ 145 (305)
+|||++.+ +|++||++.|+|.+|.. + .+|++|++..|+. .++|.|.|+|.+
T Consensus 571 ~V~D~D~~~~dd~iG~~~ipl~~L~~-G------------~r~v~L~d~~g~~~~~~~L~v~i~~~~ 624 (624)
T 1djx_A 571 MVEDYDSSSKNDFIGQSTIPWNSLKQ-G------------YRHVHLLSKNGDQHPSATLFVKISIQD 624 (624)
T ss_dssp EEEECCSSSCCEEEEEEEEEGGGBCC-E------------EEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred EEEEcCCCCCCceeEEEEEEHHHcCC-C------------cEEEeCCCCCcCCCCceEEEEEEEEEC
Confidence 99999988 89999999999999873 2 4588999887774 588999988863
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.67 E-value=5.1e-16 Score=151.66 Aligned_cols=122 Identities=18% Similarity=0.306 Sum_probs=99.3
Q ss_pred ccceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 3 SYRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..++|+|+|++|++|+..+.++++||||+|++.+ .+++|+++++ +.||+|||+|.|.+..... ..|+|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~------~~~~T~~~~~-t~nP~w~e~f~f~~~~~~~----~~l~~~ 453 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGS------QSYTTRTIQD-TLNPKWNFNCQFFIKDLYQ----DVLCLT 453 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCSS-CSSCEEEEEEEEEESCTTT----CEEEEE
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECC------eeccCCccCC-CCCCccCceEEEEecCCCC----CEEEEE
Confidence 3468999999999999999899999999999954 6899999988 7999999999999965432 579999
Q ss_pred EEecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEe
Q 021949 83 IKSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFS 144 (305)
Q Consensus 83 V~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~ 144 (305)
|||++.+ .|++||++.|+|.++.... ... .....|+.+. ++..|+|+|++++.
T Consensus 454 v~d~d~~~~~d~lG~~~~~l~~l~~~~----~~~--~~~~~~~~l~---~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 454 LFDRDQFSPDDFLGRTEIPVAKIRTEQ----ESK--GPMTRRLLLH---EVPTGEVWVRFDLQ 507 (510)
T ss_dssp EEECCSSSSCCEEEEEEEEHHHHHHHH----HHH--CSCCEEEECB---SSSSCEEEEEEEEE
T ss_pred EEeCCCCCCCCceEEEEEEHHHhcccc----CCC--CceeeeecCC---CCCCceEEEEEEEE
Confidence 9999988 7899999999999997533 111 0135577765 34779999988874
No 41
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.65 E-value=1.2e-15 Score=150.07 Aligned_cols=111 Identities=21% Similarity=0.267 Sum_probs=91.0
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.|+|+|++|++|+. +.++++||||+|++.+ .++||+|+++ ++||+|||+|.|.+.... ....|+|+|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~------~~~kTkvik~-tlNP~Wne~f~f~~~~~~---~~~~L~~~V 461 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG------QEFRTGVVWN-NNNPRWTDKMDFENVLLS---TGGPLRVQV 461 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT------EEEECCCBCS-CSSCBCCCCEEEEEEETT---TCCCEEEEE
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC------EeeeeeeecC-CCCCCCCeEEEEEEecCC---CCCEEEEEE
Confidence 4679999999999998 8899999999999975 5799999998 799999999999864321 125799999
Q ss_pred EecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEec
Q 021949 84 KSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFSE 145 (305)
Q Consensus 84 ~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~~ 145 (305)
||++.+ .|||||++.++|.. . ....|+.|. +|+|+|++++.=
T Consensus 462 ~D~D~~~~dD~LG~~~~~L~~----g----------~~~~~~~l~------~G~l~~~~~~~c 504 (540)
T 3nsj_A 462 WDADYGWDDDLLGSCDRSPHS----G----------FHEVTCELN------HGRVKFSYHAKC 504 (540)
T ss_dssp EECCSSSCCEEEEEEEECCCS----E----------EEEEEEECS------SSEEEEEEEEEE
T ss_pred EECCCCCCCCEEEEEEEEeeC----C----------cEEEEEEcC------CeEEEEEEEEEE
Confidence 999988 78999999998873 2 134566543 689999988763
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=1.7e-14 Score=130.46 Aligned_cols=97 Identities=18% Similarity=0.284 Sum_probs=81.8
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.|.|+|++|++|...+.++++||||++++..+.. ...+++|+++++ +.||+|||+|.|.+....+. ...|.|+|
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~-~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~l~i~V 224 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK-RLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQ--KVQVVVTV 224 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE-EEEEEECCCCCS-CSSCEEEEEEEEECCTTTGG--GEEEEEEE
T ss_pred CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCc-EeeeeccceecC-CCCCEEceeEEEeCCHHHhC--ceEEEEEE
Confidence 468999999999999998889999999999975321 135789999887 89999999999999765432 25899999
Q ss_pred EecCCC-CCcceeEEEEeCccc
Q 021949 84 KSDGLL-GDKTVGEVIVPIKEL 104 (305)
Q Consensus 84 ~d~~~~-~d~~IG~~~vpL~~l 104 (305)
||++.+ +|++||++.|+|..+
T Consensus 225 ~d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 225 LDYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp EECCSSSCCCEEEEEEEETTCC
T ss_pred EeCCCCCCCcEEEEEEECCCCC
Confidence 999988 789999999999763
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.53 E-value=1.4e-14 Score=146.85 Aligned_cols=108 Identities=15% Similarity=0.269 Sum_probs=90.1
Q ss_pred ccceEEEEEEEecCCCC---CCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEE
Q 021949 3 SYRALDLNLISAKHLKD---VHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTL 79 (305)
Q Consensus 3 ~~~~L~V~vvsA~dL~~---~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L 79 (305)
..++|+|+|++|++|+. .+.++++||||+|++.+.. ..++||+++++ +.||+|||+|.|.+.... ...|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~---~~k~kTkvik~-tlNPvWNEtF~F~v~~~~----~~~L 87 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP---DSRKRTRHFNN-DINPVWNETFEFILDPNQ----ENVL 87 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTST---TCCEECCCCTT-CSSCEEEEEEEEEECTTS----CCBC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCC---CCeEecceEcC-CCCCeeeeEEEEEecCCC----CCEE
Confidence 35789999999999998 6777899999999998643 36899999987 899999999999997642 2489
Q ss_pred EEEEEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeec
Q 021949 80 DFKIKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRS 128 (305)
Q Consensus 80 ~v~V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~ 128 (305)
+|+|||++.++|++||++.|+|.+|.... ....|+.|..
T Consensus 88 ~~~V~D~D~~~ddfIG~v~I~L~~L~~g~----------~~~~w~~L~~ 126 (749)
T 1cjy_A 88 EITLMDANYVMDETLGTATFTVSSMKVGE----------KKEVPFIFNQ 126 (749)
T ss_dssp EEEEEECCSSSCEEEEEECCBSTTSCTTC----------CCCEEEEETT
T ss_pred EEEEEECCCCCCceeEEEEEEHHHcCCCC----------ceEEEEecCC
Confidence 99999999878899999999999996432 2356888863
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.51 E-value=1e-14 Score=133.18 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=83.3
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.|+|+|++|++|+..+.++++||||++++..+. +...++||+++++ +.||+|||+|.|.|....+. ...|+|+|
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~-~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~--~~~L~i~V 226 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEG-RRLKKRKTSIKKN-TLNPTYNEALVFDVAPESVE--NVGLSIAV 226 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTC-CTTSCEECCCCCS-CSSCEEEECCCCCCCSGGGG--SCCCCCEE
T ss_pred cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCC-cCccceecceecC-CCCCeECceEEEEcCHHHcc--CcEEEEEE
Confidence 57899999999999999888999999999997532 1246889999887 89999999999998765442 24799999
Q ss_pred EecCCC-CCcceeEEEEeCcccc
Q 021949 84 KSDGLL-GDKTVGEVIVPIKELL 105 (305)
Q Consensus 84 ~d~~~~-~d~~IG~~~vpL~~l~ 105 (305)
||++.+ +|++||++.|+|.++.
T Consensus 227 ~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 227 VDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp EECCSSSCCEEEEECCCSSCTTC
T ss_pred EeCCCCCCCceEEEEEECCccCC
Confidence 999988 7899999999998764
No 45
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=141.16 Aligned_cols=119 Identities=23% Similarity=0.382 Sum_probs=96.2
Q ss_pred ceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeec-eEEEE-eccchhccCceEEEEE
Q 021949 5 RALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNF-PIKFT-FNQSLAQQNRLTLDFK 82 (305)
Q Consensus 5 ~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne-~f~f~-v~~~~~~~~~~~L~v~ 82 (305)
.+|+|+|++|++|... ++||||+|.|.+.+.....++||+++++++.||+||| +|.|. |....+ ..|+|+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel----a~Lrf~ 796 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL----ASLRIA 796 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG----CEEEEE
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc----CEEEEE
Confidence 4799999999999753 5899999999864322124689999988789999999 69998 654443 479999
Q ss_pred EEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCC--ccEEEEEEEEeccC
Q 021949 83 IKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKP--KGELHFSYKFSEPT 147 (305)
Q Consensus 83 V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~--~G~l~lsl~~~~~~ 147 (305)
|||++ |+|||++.|+|.+|.. + .+++.|++..|+. .++|.|.|++.+-.
T Consensus 797 V~D~d---ddfiG~~~lpL~~L~~-G------------yR~vpL~~~~g~~l~~atLfv~i~~~~~~ 847 (885)
T 3ohm_B 797 AFEEG---GKFVGHRILPVSAIRS-G------------YHYVCLRNEANQPLCLPALLIYTEASDYI 847 (885)
T ss_dssp EEETT---TEEEEEEEEETTTCCC-E------------EEEEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred EEcCC---ccEEeeEEEEHHHcCC-C------------ceEEEecCCCCCccCceEEEEEEEEEecC
Confidence 99986 8899999999999873 2 4568899887774 79999999998754
No 46
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.49 E-value=3e-13 Score=138.66 Aligned_cols=117 Identities=21% Similarity=0.354 Sum_probs=93.5
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeE-ecCCCCCCCeeec-eEEE-EeccchhccCceEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSH-VDRSGGSNPTWNF-PIKF-TFNQSLAQQNRLTLD 80 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~-v~k~~~~nP~Wne-~f~f-~v~~~~~~~~~~~L~ 80 (305)
.++|.|+|++|++|.+ .++||||+|.+.+.+....+++||+ ++++++.||+||| +|.| .|....+ ..|.
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el----~~Lr 748 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL----ASLR 748 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG----CEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCc----cEEE
Confidence 3579999999999985 3689999999976432223478999 8887789999999 6999 7865543 4899
Q ss_pred EEEEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCC--CccEEEEEEEEe
Q 021949 81 FKIKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGK--PKGELHFSYKFS 144 (305)
Q Consensus 81 v~V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~--~~G~l~lsl~~~ 144 (305)
|+|||++ +++||++.|+|.+|.. + .++++|++..|. ..++|.|.|++.
T Consensus 749 ~~V~D~d---~d~iG~~~ipl~~L~~-G------------~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 749 VAVMEEG---NKFLGHRIIPINALNS-G------------YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEEEETT---TEEEEEEEEEGGGBCC-E------------EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEEEeC---CCccceEeeehhhcCC-C------------cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 9999986 8899999999999873 2 557888887666 457888888875
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.49 E-value=2.5e-15 Score=146.48 Aligned_cols=118 Identities=16% Similarity=0.220 Sum_probs=19.4
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCC---CCCeeeceEEEEeccchhccCceEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGG---SNPTWNFPIKFTFNQSLAQQNRLTLD 80 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~---~nP~Wne~f~f~v~~~~~~~~~~~L~ 80 (305)
.++|+|+|++|++|...+ ||||++++.+ ..+.||+++++ + .||+|||+|.|.+.... ..|.
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~-----~~~~kT~v~~k-t~~glnP~WnE~F~f~~~~~~-----~~L~ 73 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDD-----MLYARTTSKPR-SASGDTVFWGEHFEFNNLPAV-----RALR 73 (483)
T ss_dssp EECC--------------------------------------------------------CCEECC--------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECC-----eEEeeeeEEeC-CCCCCCCccccEEEEecCCCc-----cEEE
Confidence 367999999999998765 9999999976 24678999876 6 99999999999864332 4899
Q ss_pred EEEEec-C---CC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCC------------------------
Q 021949 81 FKIKSD-G---LL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSG------------------------ 131 (305)
Q Consensus 81 v~V~d~-~---~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g------------------------ 131 (305)
|+|||+ + .+ +|++||++.|+|.++.... ....||.|..++.
T Consensus 74 v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~----------~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 143 (483)
T 3bxj_A 74 LHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRH----------FTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGK 143 (483)
T ss_dssp -------------------------------------------CCEECC-------------------------------
T ss_pred EEEEecCCccccCCCCceEEEEEEEHHHhcCCC----------CCCeEEECCCCCCccccccccccccccccccccccCC
Confidence 999994 4 23 7899999999999997532 2366888854221
Q ss_pred CCccEEEEEEEEeccC
Q 021949 132 KPKGELHFSYKFSEPT 147 (305)
Q Consensus 132 ~~~G~l~lsl~~~~~~ 147 (305)
+..|+|+|+++|.+..
T Consensus 144 ~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 144 GGCPAVRLKARYQTMS 159 (483)
T ss_dssp -------CEEEEEECC
T ss_pred CCCceEEEEEEeeeee
Confidence 2469999999998754
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.47 E-value=6.3e-13 Score=135.97 Aligned_cols=120 Identities=17% Similarity=0.316 Sum_probs=96.8
Q ss_pred ceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCC-CceEEeEecCCCCCCCeeece-EEEE-eccchhccCceEEEE
Q 021949 5 RALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIK-KQKVKSHVDRSGGSNPTWNFP-IKFT-FNQSLAQQNRLTLDF 81 (305)
Q Consensus 5 ~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~-~~~~kT~v~k~~~~nP~Wne~-f~f~-v~~~~~~~~~~~L~v 81 (305)
.+|+|+|++|++|... ++||||+|.|.+.+... ..++||+++++++.||+|||+ |.|. |...++ ..|+|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel----a~Lrf 721 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL----AVVRI 721 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG----CEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc----cEEEE
Confidence 5799999999999753 58999999998643221 157899999887899999998 9998 755443 48999
Q ss_pred EEEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCC--ccEEEEEEEEeccCC
Q 021949 82 KIKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKP--KGELHFSYKFSEPTV 148 (305)
Q Consensus 82 ~V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~--~G~l~lsl~~~~~~~ 148 (305)
+|||++ ++|||++.|+|.+|.. + .++++|++..|+. .++|.|.|++.+..-
T Consensus 722 ~V~D~d---ddfiG~~~ipL~~L~~-G------------yR~vpL~~~~g~~~~~atLfv~i~~~~~~~ 774 (816)
T 3qr0_A 722 IVSEEN---GKFIGHRVMPLDGIKP-G------------YRHVPLRNESNRPLGLASVFAHIVAKDYVS 774 (816)
T ss_dssp EEEETT---SCEEEEEEEESTTCCC-E------------EEEEEEECTTSCEEEEEEEEEEEEEEECCC
T ss_pred EEEecC---CCeeeEEEEEHHHcCC-c------------ceEEEEeCCCCCCCCceEEEEEEEEEecCc
Confidence 999984 7899999999999873 2 4578899887775 478999999887544
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.41 E-value=7.4e-13 Score=133.90 Aligned_cols=110 Identities=22% Similarity=0.229 Sum_probs=92.2
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.|+|+|++|++|...+.++++||||++++..+... ..+.+|+++++ ++||+|||+|.|.+..... ...|.|+|
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~-~~k~kT~v~~~-tlnP~wne~f~f~~~~~~~---~~~L~v~v 245 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKS-ESKQKTKTIKS-SLNPEWNETFRFQLKESDK---DRRLSVEI 245 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSC-CSCEECCCCSS-CSSCEEEEEEEEECCSTTT---TCEEEEEE
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccc-ccccccccccc-ccCCCccceeeeecccCCc---cceeeeEE
Confidence 4679999999999999999999999999999754322 46889999988 7999999999999876542 24799999
Q ss_pred EecCCC-CCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecC
Q 021949 84 KSDGLL-GDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSS 129 (305)
Q Consensus 84 ~d~~~~-~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~ 129 (305)
||++.+ +|++||++.++|.++.... ...|+.+...
T Consensus 246 ~d~d~~~~dd~iG~~~i~l~~l~~~~-----------~~~w~~Lls~ 281 (674)
T 3pfq_A 246 WDWDLTSRNDFMGSLSFGISELQKAG-----------VDGWFKLLSQ 281 (674)
T ss_dssp EECCSSSCCEECCBCCCBTTHHHHCC-----------EEEEEECBCT
T ss_pred eecccccccccccccccchhhhccCC-----------cccceeeccc
Confidence 999988 8999999999999998533 3678888753
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.07 E-value=3.1e-09 Score=83.76 Aligned_cols=119 Identities=13% Similarity=0.163 Sum_probs=82.7
Q ss_pred ceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEEE
Q 021949 5 RALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKIK 84 (305)
Q Consensus 5 ~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V~ 84 (305)
..|+|.+.+...-.........||||.|.++.... ..+.+|-+.|..|..|+|||+|.-.|.+. ..|.|.|+
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~--~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G------r~l~i~Vf 77 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALS--TERGKTLVQKKPTMYPEWKSTFDAHIYEG------RVIQIVLM 77 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEE--ETTEEEEECCSCCBCCCTTCEEEEECCTT------CEEEEEEE
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEE--cccceeecccCCCCCcCccceEEeeeeCC------EEEEEEEE
Confidence 45778887765422222223589999999975210 11225534444589999999999998764 48999999
Q ss_pred ecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEe
Q 021949 85 SDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFS 144 (305)
Q Consensus 85 d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~ 144 (305)
+... +||..|+|.+.+|..+- ....+ ....|+.|. +.|+|++.+++.
T Consensus 78 h~a~---~fvAn~tV~~edL~~~c-~~~~g----~~e~WvdLe-----P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 78 RAAE---EPVSEVTVGVSVLAERC-KKNNG----KAEFWLDLQ-----PQAKVLMSVQYF 124 (126)
T ss_dssp EETT---EEEEEEEEEHHHHHHHH-HTTTT----EEEEEEECB-----SSCEEEEEEEEE
T ss_pred cCCC---CeeeEEEEEHHHHHhhh-ccCCC----ceEEEEecc-----cCcEEEEEEEEe
Confidence 8765 89999999999999641 00011 357788775 689999999875
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.03 E-value=4.8e-09 Score=83.75 Aligned_cols=120 Identities=12% Similarity=0.203 Sum_probs=83.4
Q ss_pred ceEEEEEEEecCCCCCC-CCCCCCcEEEEEEecCCCCCCceEEe-EecCCCCCCCeeeceEEEEeccchhccCceEEEEE
Q 021949 5 RALDLNLISAKHLKDVH-LISKMDVYAVVSISGDHTIKKQKVKS-HVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFK 82 (305)
Q Consensus 5 ~~L~V~vvsA~dL~~~~-~~gk~dpYv~v~l~~~~~~~~~~~kT-~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~ 82 (305)
..|+|.+.+........ .....||||.|.++.... ..+.+| ...+. |..|+|||+|.-.|.+. ..|.|.
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~--te~gqtl~~Kkk-T~~P~Wne~Fd~~V~~G------r~l~i~ 80 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVE--SENGQMYIQKKP-TMYPPWDSTFDAHINKG------RVMQII 80 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEE--ETTEEEEEEEEE-EECCCSSSEEEECCCSS------CEEEEE
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeee--ccCceeecccCC-CCCccccceEeeeEECC------eEEEEE
Confidence 45888887776543321 123589999999875210 012555 33333 78999999999998764 489999
Q ss_pred EEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCCCCccEEEEEEEEecc
Q 021949 83 IKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSGKPKGELHFSYKFSEP 146 (305)
Q Consensus 83 V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g~~~G~l~lsl~~~~~ 146 (305)
|++... +||..|+|.+.+|..+- ....+ ....|+.|. +.|+|++.+++.-.
T Consensus 81 Vfh~a~---~fVAn~tV~~edL~~~c-k~~~g----~~e~WvdLe-----P~Gkl~v~i~~~~e 131 (138)
T 2enj_A 81 VKGKNV---DLISETTVELYSLAERC-RKNNG----KTEIWLELK-----PQGRMLMNARYFLE 131 (138)
T ss_dssp EECSSC---SCCEEEEEESHHHHHHH-HHTTT----CEEEEEECB-----SSCEEEEEEEECCC
T ss_pred EEcCCC---CeeeEEEEEHHHHHhhh-ccCCC----ceEEEEecc-----cCcEEEEEEEEEEe
Confidence 997654 89999999999999641 00022 347788875 68999999999643
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.04 E-value=0.0049 Score=50.34 Aligned_cols=130 Identities=12% Similarity=0.212 Sum_probs=86.0
Q ss_pred ceEEEEEEEecCCCCC-CCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhc---cCceEEE
Q 021949 5 RALDLNLISAKHLKDV-HLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQ---QNRLTLD 80 (305)
Q Consensus 5 ~~L~V~vvsA~dL~~~-~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~---~~~~~L~ 80 (305)
..|+|.|.++.--... ...+..+|...++++--+ -..+.|.+.+ +.+|.+|.+..|.|.....- .....|.
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~d---fEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD---FELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT---CCCEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEec---eEeeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 5688888887621110 011335666655555332 3688888877 58999999988887554421 1124678
Q ss_pred EEEEecCCCCCcceeEEEEeCcccccccCCCCCCCCCcceEEEEEeecCCC--CCccEEEEEEEEeccCC
Q 021949 81 FKIKSDGLLGDKTVGEVIVPIKELLDSSSSSSSGDAKSMKFVTYQVRSSSG--KPKGELHFSYKFSEPTV 148 (305)
Q Consensus 81 v~V~d~~~~~d~~IG~~~vpL~~l~~~~~~~~~~~g~~~~~~~~~l~~~~g--~~~G~l~lsl~~~~~~~ 148 (305)
|+|.......-+.||.++|+|.+|+.+. . .+ .....|...++ ..-|+|++.|+++-.+.
T Consensus 93 lELhqa~g~~~~tla~~~I~l~~lLe~~----~----~i-~g~~~L~g~~g~~~~~G~LeywiRL~~Pi~ 153 (156)
T 2yrb_A 93 LEVHQAYSTEYETIAACQLKFHEILEKS----G----RI-FCTASLIGTKGDIPNFGTVEYWFRLRVSGP 153 (156)
T ss_dssp EEEEEECSSCEEEEEEEEECCSHHHHCC----S----CE-EEEEEECBSSSCCTTSEEEEEEEEEEECCC
T ss_pred EEEEEeeCCCceEEEEEEEEhHHhhCcC----C----ce-EEEEEEEcCCCCcceEEEEEEEEEEecccC
Confidence 8887765445568999999999999644 1 12 34456666666 57899999999987654
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.43 E-value=0.045 Score=47.13 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=59.6
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCC-------------CCceEEeEecCCCCCCCeeeceEEEEeccc
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTI-------------KKQKVKSHVDRSGGSNPTWNFPIKFTFNQS 70 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~-------------~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~ 70 (305)
...|.|++.+++--+ .......|.-|+|.+..++.. ....++|.|... +.+|.|+|++++.|+..
T Consensus 26 RNdLYVtl~~g~F~~-~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YH-nk~P~w~EtIKi~LP~~ 103 (220)
T 3l4c_A 26 RNDIYVTLVQGDFDK-GSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQ-VKQPRWFETVKVAIPIE 103 (220)
T ss_dssp CEEEEEEEEEEECCC-SSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTT-CSSCCCCEEEEEEECTT
T ss_pred cccEEEEeeEeEECC-CCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEc-CCCCCceEeEEEeeChh
Confidence 345778888875222 111122344455554332211 135677877766 68999999999999876
Q ss_pred hhccCceEEEEEEEecCCC-----CCcceeEEEEeCcc
Q 021949 71 LAQQNRLTLDFKIKSDGLL-----GDKTVGEVIVPIKE 103 (305)
Q Consensus 71 ~~~~~~~~L~v~V~d~~~~-----~d~~IG~~~vpL~~ 103 (305)
.. .+..|.|++++.... .++.+|-+++||-+
T Consensus 104 ~~--~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 104 DV--NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SS--TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred hc--CCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 54 346888888875432 23468888888754
No 54
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=95.88 E-value=0.00017 Score=61.04 Aligned_cols=25 Identities=28% Similarity=0.424 Sum_probs=9.8
Q ss_pred CCCcchhhhHHHHHHHHHHhhhhcc
Q 021949 263 GGLGFGTGLLGGMLGGLLIGDIVSD 287 (305)
Q Consensus 263 ~g~g~~~g~~~g~~~g~~~~~~~~~ 287 (305)
+.+++++|+++|||+|+||+++|++
T Consensus 101 ~a~aAa~Gag~G~LGGalLG~a~~~ 125 (219)
T 1dx0_A 101 VAGAAAAGAVVGGLGGYMLGSAMSR 125 (219)
T ss_dssp ------------CCCSCEECCCCCC
T ss_pred HHHHHHHHHHhhhhhhhhhhccccc
Confidence 3444566777777888888777765
No 55
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=95.84 E-value=0.00035 Score=59.19 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=9.9
Q ss_pred CCCCCcchhhhHHHHHHHHHHhhhhccccc
Q 021949 261 SNGGLGFGTGLLGGMLGGLLIGDIVSDAAD 290 (305)
Q Consensus 261 ~~~g~g~~~g~~~g~~~g~~~~~~~~~~~~ 290 (305)
....+++++++++|+++|||.+.||+++.+
T Consensus 95 ~kg~~g~a~aAa~Gag~G~LGGalLG~a~~ 124 (219)
T 1dx0_A 95 KTNMKHVAGAAAAGAVVGGLGGYMLGSAMS 124 (219)
T ss_dssp ------------------CCCSCEECCCCC
T ss_pred CCCcchHHHHHHHHHHhhhhhhhhhhcccc
Confidence 334567888899999999999999988644
No 56
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=94.30 E-value=0.33 Score=50.99 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=62.6
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.+.|+|+++..+.. +.....+.||.+.+-.....-....+|+.+ . ..++.|||.++|++.-..+- +...|.|.|
T Consensus 354 ~~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~-~~~~~Wne~l~f~i~i~dLP-r~arL~~tl 429 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRV-P-CSNPRWNEWLNYDIYIPDLP-RAARLCLSI 429 (1091)
T ss_dssp CSEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCC-C-TTSCEEEEEEEEEEEGGGCC-TTCEEEEEE
T ss_pred CCCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceecccc-C-CCCCCCCeeEEecCccccCC-hhcEEEEEE
Confidence 3578999999988753 333346789998887543221233444432 2 46788999999987554443 347899999
Q ss_pred EecCCC-----CCcceeEEEEeCcccc
Q 021949 84 KSDGLL-----GDKTVGEVIVPIKELL 105 (305)
Q Consensus 84 ~d~~~~-----~d~~IG~~~vpL~~l~ 105 (305)
|+.... .+..||++.++|-+..
T Consensus 430 ~~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 430 CSVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCCC-------CCEEEEEESBCTT
T ss_pred EEecCccCcccccceeEEeeeeeEccC
Confidence 985432 2246888888776653
No 57
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=94.28 E-value=0.22 Score=51.73 Aligned_cols=96 Identities=13% Similarity=0.160 Sum_probs=58.3
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
...|.|+|+++.++... ...+.||.+.+-.....-.....|..+.. ..++.|||.+.|++.-..+- +...|.|.|
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~dLP-r~a~L~~ti 290 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVCDLP-RMARLCFAL 290 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGGGCC-TTCEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccccCC-cccEEEEEE
Confidence 35789999999887533 34678888887643211112333433332 46899999999987555443 347899999
Q ss_pred EecCCC-------------CCcceeEEEEeCccc
Q 021949 84 KSDGLL-------------GDKTVGEVIVPIKEL 104 (305)
Q Consensus 84 ~d~~~~-------------~d~~IG~~~vpL~~l 104 (305)
|+.... .+..||++.++|-+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 985221 123566666665543
No 58
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=89.67 E-value=0.31 Score=51.36 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=49.3
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
...|.|+|+++.++... ...+.||.+.+-.....-....+|..+.. ..++.|||.+.|.+.-..+- +...|.|.|
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~-~~~~~Wnewl~f~i~~~dLP-r~a~L~~ti 426 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISG-KNDHIWNEQLEFDINICDLP-RMARLCFAV 426 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCS-SSCCCCCEEEEEEEESSSCC-TTCEEEEEC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCCccceeEEeCCccccCC-hhcEEEEEE
Confidence 35788999998877533 34677887666532211112233433322 56899999999987555443 347899999
Q ss_pred EecC
Q 021949 84 KSDG 87 (305)
Q Consensus 84 ~d~~ 87 (305)
|+..
T Consensus 427 ~~~~ 430 (1092)
T 2y3a_A 427 YAVL 430 (1092)
T ss_dssp CCC-
T ss_pred EEec
Confidence 9853
No 59
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=88.92 E-value=1.4 Score=46.01 Aligned_cols=79 Identities=10% Similarity=0.102 Sum_probs=47.1
Q ss_pred cceEEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCCCceEEeEecCCCCCCCeeeceEEEEeccchhccCceEEEEEE
Q 021949 4 YRALDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIKKQKVKSHVDRSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKI 83 (305)
Q Consensus 4 ~~~L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~~~~~kT~v~k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V 83 (305)
.+.++|+|+.+..+... .....+.||.+.|-.... ...+.+|..+.- +.++.|||.+.|.+.-..+- +...|.|.|
T Consensus 217 ~~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~-~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dLP-r~a~L~~ti 292 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQ-VLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDLP-KGALLNLQI 292 (961)
T ss_dssp CSEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTE-EEEEEECCCEEC-CSEEEEEEEEEEEEEGGGCC-TTCEEEEEE
T ss_pred cCceEEEEeeccccccc-CCCCceEEEEEEEEECCE-Ecccceeecccc-CCCcccceeEEeccccccCC-cccEEEEEE
Confidence 35688889887642211 113467888887654321 111233333222 46799999999987555443 347889999
Q ss_pred Eec
Q 021949 84 KSD 86 (305)
Q Consensus 84 ~d~ 86 (305)
|+.
T Consensus 293 ~~~ 295 (961)
T 1e7u_A 293 YCG 295 (961)
T ss_dssp EEE
T ss_pred Eec
Confidence 974
No 60
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=86.00 E-value=2.2 Score=34.37 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=57.9
Q ss_pred EEEEEEEecCCCCCCCCCCCCcEEEEEEecCCCCC-CceEEeEec-CCCCCCCeeeceEEEEeccchhccCceEEEEEEE
Q 021949 7 LDLNLISAKHLKDVHLISKMDVYAVVSISGDHTIK-KQKVKSHVD-RSGGSNPTWNFPIKFTFNQSLAQQNRLTLDFKIK 84 (305)
Q Consensus 7 L~V~vvsA~dL~~~~~~gk~dpYv~v~l~~~~~~~-~~~~kT~v~-k~~~~nP~Wne~f~f~v~~~~~~~~~~~L~v~V~ 84 (305)
|.|.|.+- +|++.. .-.|||++|++....... ...+.|.+. +..+..-.||.++++...-+.+.. ...|.||++
T Consensus 16 l~v~Ie~i-glkda~--~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~-G~aivfElk 91 (152)
T 2qzq_A 16 LTLTIEKI-GLKDAG--QCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPK-GAAIFFEFK 91 (152)
T ss_dssp EEEEEEEE-ECTTGG--GCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCT-TCEEEEEEE
T ss_pred EEEEEEEE-EeCCHH--HccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCC-CcEEEEEEE
Confidence 56666554 676644 337999999987644321 245667664 222333445555555443333333 467889998
Q ss_pred ecCCCCCc--ceeEEEEeCccccc
Q 021949 85 SDGLLGDK--TVGEVIVPIKELLD 106 (305)
Q Consensus 85 d~~~~~d~--~IG~~~vpL~~l~~ 106 (305)
+....+.+ ..+++.+.++++..
T Consensus 92 H~k~kkkk~S~kCw~f~~~d~i~~ 115 (152)
T 2qzq_A 92 HYKPKKRFTSTKCFAFMEMDEIKP 115 (152)
T ss_dssp EEETTTTEEEEEEEEEEEGGGCCS
T ss_pred EecccceeeeeeeEEEEEhhhccc
Confidence 87655333 57889999888764
No 61
>2lbg_A Major prion protein; conserved hydrophobic region, membrane protei; NMR {Homo sapiens}
Probab=75.61 E-value=1.9 Score=23.91 Aligned_cols=20 Identities=35% Similarity=0.645 Sum_probs=14.0
Q ss_pred chhhhHHHHHHHHHHhhhhc
Q 021949 267 FGTGLLGGMLGGLLIGDIVS 286 (305)
Q Consensus 267 ~~~g~~~g~~~g~~~~~~~~ 286 (305)
.++|++.|.|||-+++.+|+
T Consensus 7 ~AAGaVvGglGgy~lg~~ms 26 (27)
T 2lbg_A 7 AAAGAVVGGLGGYMLGSAMS 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHhc
Confidence 45677777778877777664
No 62
>3heq_A Major prion protein; cell membrane, disease mutation, disulfide bond, glycoprotein, golgi apparatus, GPI-anchor, lipoprotein, membrane, polymorphism; 1.80A {Homo sapiens} PDB: 2lsb_A 2k1d_A 2lej_A 2lv1_A 2lft_A 1fkc_A 1fo7_A 3haf_A 3hj5_A 1qm0_A 1qm1_A 2kun_A 3hes_A 3her_A 1b10_A 2joh_A 2fj3_A 2jom_A 2l1h_A 2l39_A ...
Probab=25.78 E-value=10 Score=29.37 Aligned_cols=19 Identities=32% Similarity=0.641 Sum_probs=4.7
Q ss_pred chhhhHHHHHHHHHHhhhh
Q 021949 267 FGTGLLGGMLGGLLIGDIV 285 (305)
Q Consensus 267 ~~~g~~~g~~~g~~~~~~~ 285 (305)
.++|+++|.|+|-++|.+|
T Consensus 27 AaAGAVvGGlgGy~lG~am 45 (142)
T 3heq_A 27 AAAGAVVGGLGGYMLGSAM 45 (142)
T ss_dssp ----------CCCEECCCC
T ss_pred HHhhhhhhccchHHHHhhc
Confidence 4445555555555555544
No 63
>1tpx_A Prion protein, major prion protein; antibody, unknown function; 2.56A {Ovis aries} SCOP: d.6.1.1
Probab=25.40 E-value=3.7 Score=31.58 Aligned_cols=19 Identities=32% Similarity=0.641 Sum_probs=7.1
Q ss_pred chhhhHHHHHHHHHHhhhh
Q 021949 267 FGTGLLGGMLGGLLIGDIV 285 (305)
Q Consensus 267 ~~~g~~~g~~~g~~~~~~~ 285 (305)
.++|++.|.|+|-++|.+|
T Consensus 6 aaaGAvvGgl~Gy~lg~a~ 24 (121)
T 1tpx_A 6 AAAGAVVGGLGGYMLGSAM 24 (121)
T ss_dssp --------CCTTCEECCCC
T ss_pred HHHhHHhhcchhHHHHhcc
Confidence 4556666666666666665
Done!